core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1388256	1388399	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	1	144	GCA_014701215_1_1_1318	GCA_014701215_1_1_1318	-	1809645	.	.	hypothetical protein	MESIKLSQKAEEEIVNAARMAALSNLTEKSQNLITLEDIAIYFGRHY*	.	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0001	shell	direct	high	143	0.993	GCA_014701215.1_01392
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1388441	1388560	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	186	305	GCA_014701215_1_1_1319	GCA_014701215_1_1_1319	-	1809645	.	.	hypothetical protein	MNKLIITLVCAFVVYMVHALNLNQDFDGKICHAEQTQQY*	.	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0002	shell	direct	high	119	0.992	GCA_014701215.1_01393
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1388892	1389266	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	637	1011	GCA_014701215_1_1_1320	GCA_014701215_1_1_1320	-	1809645	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTNSNLIPVFNGLIQNQPVQLCNARELHAFLEIQTRYNDWIKNRINEYGFIQDEDYLVITERTNGRPRKEYHITLDMGKELGMVERNERGRQIRQYFARCERTLKALQPTTTARLARTRKEIQF*	mmseqs_cdd	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0003	shell	direct	high	374	0.997	GCA_014701215.1_01394
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1389823	1389990	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	1568	1735	GCA_014701215_1_1_1321	GCA_014701215_1_1_1321	-	1809645	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMADIKQTRLKNGRKKKKTAYLKMIKN*	.	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1390200	1390409	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	1945	2154	GCA_014701215_1_1_1322	GCA_014701215_1_1_1322	-	1809645	.	.	hypothetical protein	MKKYLFHYYFQGTKWACDVYANNPEEAKEKIKAMSQAIYDGELKFEIHIPENPLSKLARLVARIIKKFT*	.	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0005	shell	direct	high	209	0.995	GCA_014701215.1_01396
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1390423	1390596	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	2168	2341	GCA_014701215_1_1_1323	GCA_014701215_1_1_1323	+	1809645	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MKFETYVDARIEWRWRLKADNGKIIADSGEGYKNYTDCLHAIDLVKSTNQSTKVEMA*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0006	shell	direct	high	173	0.994	GCA_014701215.1_01397
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1391088	1391903	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	2833	3648	GCA_014701215_1_1_1324	GCA_014701215_1_1_1324	-	1809645	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRYRPYFETGEFVNVGLLMCEPEKKKLTYQLVPKNNKRVNDFFYKSKMFETVRETINDELQYVVNQPFNGSAQDIATFFHHYIDVKEGIVQYSNAAVGMVDDPQDYFNKLYTQFIQNAGVKTESQEQVILKHYKTLFRQENDSVLAQYKQYMVNGDFAKFALPLALKNQQDKHILKAVKPLAFDQVESPSMIEHCDSWVAKINRAEQEGFIKRENILFALDTPNTAHKANILDTIKRTFDHFKLQHISWNEDKQIINFAKAI*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0007	shell	direct	high	815	0.999	GCA_014701215.1_01398
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1391900	1392673	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	3645	4418	GCA_014701215_1_1_1325	GCA_014701215_1_1_1325	-	1809645	.	PF09192.10	Actin-fragmin kinase, catalytic	MATVEEVLLDKRMDKIIFIRERMEMGITRPFICQTDKENWFIIKTLSMMPISQLLAEVIGSTLAHEIGLPCPSIDFVEITPKSTQYVSSEWRQDLPNGIAFASSFVVNAKIAKTVQVKNPAFLSEPEQKLLYMFDRWILNSDRTASQVGTGNINLLFDEQQQKILVIDHNLAFDERADFSEHIFSPQNREWRLDWVDKQTFTDKAIDTLKKFDHIYQSIPDDWFVGDEEFHKIEHQINRIKALLNRITQENYWDNIE*	hhsuite_tools	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0008	shell	direct	moderate	708	0.915	GCA_014701215.1_01399
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1392707	1393363	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	4452	5108	GCA_014701215_1_1_1326	GCA_014701215_1_1_1326	-	1809645	.	pfam00717	Peptidase S24-like. 	MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEVLAFDSNISEIKESICRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVVAINGDNEATFKQYKELGTKTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	mmseqs_cdd	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0009	shell	direct	high	656	0.998	GCA_014701215.1_01400
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1393721	1393942	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	5466	5687	GCA_014701215_1_1_1327	GCA_014701215_1_1_1327	+	1809645	.	PFAM:PF10078.8	CII-like-regulator	MARNKLTRSARVLSDQVIEKYYKQKQYEVAEGMETTPSTLSRFISNEEFNQTFNFIAACQFGVFSRYASELML*	phrogs_hmm	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0010	shell	direct	high	221	0.995	GCA_014701215.1_01401
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1393939	1394562	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	5684	6307	GCA_014701215_1_1_1328	GCA_014701215_1_1_1328	+	1809645	.	PFAM:PF04492.12	Replication-protein-O	MSRFIPNSFQIPNSFVDEYLDSLSGKAIKCYLLIARKTTGWRKDSDRISTSQFMAQCGIKDRKTAYAAIEELESVNLVNIERKQGEINEFSLNFFIDENNDFKPAPKNGISTSTKNWDSTKDNIKNNIQDNPPISPQGESATPANGKINAENIPLPDYIDRETWIAYCRMRKVKRAEIKTQDTIKRCLRDLEKLCGGSPDLARAILD*	rep_hall_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0011	cloud	direct	high	623	0.998	GCA_014701215.1_01402
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1394721	1395362	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	6466	7107	GCA_014701215_1_1_1329	GCA_014701215_1_1_1329	+	1809645	.	PFAM:PF06992.10	Replication-protein-P	MNAITPTQKSAVEKSDVSDNATKLIDRMFTRLKSLFPAWKQAFDSIETYNETKQVWLEELIKADVMTPLALKRGLDRAAGSESPFFPSVGQFIAWCSEDYHELGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKLSFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0012	shell	direct	high	641	0.998	GCA_014701215.1_01403
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1395359	1395562	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	7104	7307	GCA_014701215_1_1_1330	GCA_014701215_1_1_1330	+	1809645	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLED*	.	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0013	shell	direct	high	203	0.995	GCA_014701215.1_01404
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1395619	1396038	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	7364	7783	GCA_014701215_1_1_1331	GCA_014701215_1_1_1331	+	1809645	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0014	shell	direct	high	419	0.998	GCA_014701215.1_01405
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1396127	1396672	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	7872	8417	GCA_014701215_1_1_1332	GCA_014701215_1_1_1332	+	1809645	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAKKAQELAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNIHKQCAPCNDHKSGNIIEYRINLVNKISADKVAWLERQDHELKKYTIEDCKAMIKHYKAKIKELEE*	common_virus_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0015	shell	direct	high	545	0.998	GCA_014701215.1_01407
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1396673	1397182	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	8418	8927	GCA_014701215_1_1_1333	GCA_014701215_1_1_1333	+	1809645	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPTEPNEPICDDSTGMMISEVVGRFFLKNDRTLHYIVFSYYVNKGTINHIAVKLRENCGEIKMQPCAGKPDIRIPSLKTMIRNVEKELKLAKAIIHELLVIGFVILQTGRQNAKNIKITY*	mmseqs_cdd	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0016	shell	direct	high	509	0.998	GCA_014701215.1_01408
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1397444	1397800	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	9189	9545	GCA_014701215_1_1_1334	GCA_014701215_1_1_1334	+	1809645	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKICEFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0017	shell	direct	high	356	0.997	GCA_014701215.1_01410
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1397769	1398371	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	9514	10116	GCA_014701215_1_1_1335	GCA_014701215_1_1_1335	+	1809645	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISVQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0018	shell	direct	high	602	0.998	GCA_014701215.1_01411
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1398364	1398672	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	10109	10417	GCA_014701215_1_1_1336	GCA_014701215_1_1_1336	+	1809645	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGAVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHKENHD*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0019	cloud	direct	high	308	0.997	GCA_014701215.1_01412
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1398855	1399061	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	10600	10806	GCA_014701215_1_1_1337	GCA_014701215_1_1_1337	-	1809645	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MIELALLNDYSALRAWREHLGLTQAEVAGRLGISQAAYSQHENSQTLRKSTRIKIATALGINPAQLDF*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0020	.	unmatched_CDS	none	0	0	.
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1399125	1399514	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	10870	11259	GCA_014701215_1_1_1338	GCA_014701215_1_1_1338	+	1809645	.	PDB:5OE8_A	Large-Terminase	MLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRE*	hallmark_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0021	shell	direct	high	389	0.997	GCA_014701215.1_01413
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1399550	1399933	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	11295	11678	GCA_014701215_1_1_1339	GCA_014701215_1_1_1339	+	1809645	.	PDB:4IDH_A	Large-Terminase	MEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL*	hallmark_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0022	shell	direct	high	383	0.997	GCA_014701215.1_01414
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1399935	1401266	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	11680	13011	GCA_014701215_1_1_1340	GCA_014701215_1_1_1340	+	1809645	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSANFGRYSEYIITGGTQSVLVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDTENEYDRKELSFGGLKDLLTEFRNAVAGAADIPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNADELARNFEEPEGESTQVQASEDEQENGALI*	hallmark_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0023	shell	direct	high	1331	0.999	GCA_014701215.1_01415
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1401295	1401579	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	13040	13324	GCA_014701215_1_1_1341	GCA_014701215_1_1_1341	+	1809645	.	PFAM:PF06152.10	minor-capsid-protein	MTDDVEIALQQPQGSFFMDDAKGFQAISAKALMKVLENYEKSDRTSQAENIANGFVSRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVN*	hallmark_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0024	shell	direct	high	284	0.996	GCA_014701215.1_01416
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1401576	1402241	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	13321	13986	GCA_014701215_1_1_1342	GCA_014701215_1_1_1342	+	1809645	.	PFAM:PF04233.13	Minor-capsid-component	MNALTAGNIQLIKSIRAQYLDKVQNAVMQAMVRGSLNKDLAAQIKDLGKTTEKQAMFIARDQSSKLNAALTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYSNPPADTGHPGHDFNCRCVQIPVLDTEQEKQIIEQYEVDKVKEAISPSQYRYHVGDMEQNPVAMEFVKKYNLSTKEAVSIRDYTTNSYAKINSQLREDKAAPSILMMAKVIIMR*	hallmark_hmm	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0025	cloud	direct	high	665	0.998	GCA_014701215.1_01417
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1402547	1402855	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	14292	14600	GCA_014701215_1_1_1343	GCA_014701215_1_1_1343	+	1809645	.	.	hypothetical protein	MRKEYTDDDLFKKNTARRHSGEKIKLSEYLMLWMYELLTKPVEFGMRDAVLYRIHKKFTDEIPFDDTVKEMDRLIGEAEKAESQSKSYDEIVDMLWPRDNKE*	.	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0026	cloud	direct	high	308	0.997	GCA_014701215.1_01418
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1402852	1403208	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	14597	14953	GCA_014701215_1_1_1344	GCA_014701215_1_1_1344	+	1809645	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKRNWDLIRSILLKLESQSEARGSLLPDGFTGFDSETVSYHFKLLQSAGLIEAIDYSSLNEMSLIARSLTWQGHELLDKIRNDTVWNSLKTTIKSKSLDLSLDTIKQVAQTIISQMLA*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0027	cloud	direct	high	356	0.997	GCA_014701215.1_01419
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1403269	1404369	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	15014	16114	GCA_014701215_1_1_1345	GCA_014701215_1_1_1345	+	1809645	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSLFSDETIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDESAIKTVQENGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGSVKLADEDKTIMGKTAKILDAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGGQPTEPKEKQSKPENKKDDDVEKEELEKRLKAKDEEIQQLKDAQAKRDAEVKQAAVLADAKTAFKEVNFADNSTVREIQESAVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAEPKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0028	shell	direct	high	1100	0.999	GCA_014701215.1_01420
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1404382	1404837	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	16127	16582	GCA_014701215_1_1_1346	GCA_014701215_1_1_1346	+	1809645	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MSYAYEQAPARAGEVGKHVGQFRVINVYQLRKFFGFRNSPNALGFSQKRLGGAQWYRKRDPLSDSVRLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEGCHIVDNYDMTVSISVPSASTSDFKKFAINHLDILPRQAGVQYLFNLT*	mmseqs_cdd	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0029	shell	direct	high	455	0.998	GCA_014701215.1_01421
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1404870	1405862	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	16615	17607	GCA_014701215_1_1_1347	GCA_014701215_1_1_1347	+	1809645	.	pfam03406	Phage tail fibre repeat. This repeat is found in the tail fibers of phage. For example protein K. The repeats are about 40 residues long.	MKAFLHHLQNEAKLIISPIYCVVGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTVDGKVGLNGNESINGEKSFENRIVAKRNIRISDSPHYVSRGDYLNIGANNGDCWFEYKSTNREIGTLRMHANGNLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEEFRGNLNELKTDGIYAITQASRSQNLPVSTSCHIQVIAGNDGAWCRQLAYVAYSTDMYERHQTSQAEDNWSTWVKLNDIEPVRELLSTKANISHTHNPRGQSNRLLSSFHESNNVEIGLCYQSSKLKYAMSIYLFTKLRLYF*	mmseqs_cdd	common_virus	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0030	shell	direct	moderate	953	0.96	GCA_014701215.1_01423
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1406162	1406452	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	17907	18197	GCA_014701215_1_1_1348	GCA_014701215_1_1_1348	-	1809645	.	PFAM:PF10078.8	transcriptional-regulator	MEKLEFISLENLKHDLIAQDPTFEIRLVVHKQQQAIVQQLKADRLAKHLTQQDIANLTGIKTQNISRLERGMVMPNADTLIRYAQALGGTFQYVPA*	phrogs_hmm	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0031	cloud	direct	high	290	0.997	GCA_014701215.1_01424
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1406463	1406804	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	18208	18549	GCA_014701215_1_1_1349	GCA_014701215_1_1_1349	-	1809645	.	COG4679	Phage-related protein  [Mobilome: prophages, transposons]. 	MHNMPFSVHILTQVRKAISKMPQSLQEKIYFDLDDLETYGNELQEPKVRDLGNGLKELRTTAKEGIARSFFFFHIGKQIFVVHAIQKKTQKTPKQDLMLAKVRMKQLKDQLKP*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0032	cloud	direct	moderate	333	0.974	GCA_014701215.1_01425
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1406877	1407323	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	18622	19068	GCA_014701215_1_1_1350	GCA_014701215_1_1_1350	+	1809645	.	PFAM:PF14301.5	tail-protein	MTIYYKNGFFDDTDGGFVPESAVEISQETYLELLNGQSRGKQIIADKTGYPVLIDPQPSAAHVLNLDTLTWEISAEKQTALFAQQKEGLLNKLANKADQLKNGLLAGYPQTEIESFYRQEKEALAWQADNSTETPNAHTNRPKSWCAV*	phrogs_hmm	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0033	cloud	direct	high	446	0.998	GCA_014701215.1_01426
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1407283	1407489	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	19028	19234	GCA_014701215_1_1_1351	GCA_014701215_1_1_1351	+	1809645	.	.	hypothetical protein	MLTQIAQNRGVPFEILVEKVIEKSAQFAVVIGIIIGQLQAFEDRLLTFKTPEELTALEQEIEQWQFPT*	.	hypothetical_protein	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0034	shell	direct	high	206	0.995	GCA_014701215.1_01427
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	CDS	1407720	1408739	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	19465	20484	GCA_014701215_1_1_1352	GCA_014701215_1_1_1352	+	1809645	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHNFTIQCLKLAGNPVFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAINGFGTLGFGFIEVGTVTPIAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYADYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPIAVKIAPDLTESELMQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_CDS_0035	persistent	direct	high	1019	0.999	GCA_014701215.1_01428
GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote	cenote	tRNA	1397309	1397379	GCA_014701215.1	AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215.1_AP022846.1	GCA_014701215.1|AP022846.1	GCA_014701215_1_1	GCA_014701215_1_1@C82	9054	9124	tRNA-Trp	tRNA-Trp	+	1809645	.	tRNAscan-SE score: 48.8	Trp	NA	tRNAscan-SE	.	C82	20484	1388256	1408740	GCA_014701215.1|AP022846.1@region_1388257_1408740@tool_cenote_tRNA_0001	.	.	.	.	.	.