core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	5691	6311	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	1	621	GCA_015256085_1_101_2	GCA_015256085_1_101_2	-	11500	.	PRK10140	N-acetyltransferase. 	MDSSDWMHCLSNYKIELYVPNESITDMRNPYPIHKEQTMQNIIIREATPADAAACMKHSRRVGSETDNLSFGADGFPISLEGEKEYIKMMHEAPRSVLYVAIKDGEVVGTVSLNGLPRRMSHRAELGITVLMSEWGKGLGSRLMETVIDFAEKSGIEIIELAVRSDNERAIRLYKKHGFESIGVYKSYFKIDEKYVDFKLMNLYFT*	mmseqs_cdd	nonviral_gene	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0001	persistent	indirect	.	.	.	GCA_000187855.1_01054
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	6266	6373	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	576	683	GCA_015256085_1_101_3	GCA_015256085_1_101_3	-	11500	.	.	hypothetical protein	MKIKVTKRPTTTKEKVIGGAVWIAVIGCIAYLIIK*	.	hypothetical_protein	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0002	shell	indirect	.	.	.	GCA_015255705.1_00146
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	6609	6968	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	919	1278	GCA_015256085_1_101_4	GCA_015256085_1_101_4	-	11500	.	.	hypothetical protein	MLDGSNVYIDGRSLNRVLNMHGHEMSKDEFSFIADTSKSLDYYADNLKRHENSLILLKKLPIKDERDMECIFVKHGNSKVIHFHKMGNRKLRKLEKESNLIDIRRYLFYYIGNIKWFRG*	.	hypothetical_protein	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0003	cloud	indirect	.	.	.	GCA_019929575.1_00128
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	7232	7708	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	1542	2018	GCA_015256085_1_101_5	GCA_015256085_1_101_5	-	11500	.	PFAM:PF06810.10	minor-structural-protein	MYTEEKQPRIKAYRERKNIMKREVIENLLKGLGVAEDKVKEAVDTIMTENGNDIERYKTSETNLKSLLKTANETLEKFKDVNIDGLKGEVQKYKDAATEAESNSKAKIERLQFGYALDGALRTAGAKNSKVVRALLDEADFNTSAGSKGNLGSLKGSI*	hallmark_hmm	common_virus	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0004	cloud	indirect	.	.	.	GCA_000238115.1_00627
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	7816	8148	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	2126	2458	GCA_015256085_1_101_6	GCA_015256085_1_101_6	-	11500	.	pfam09639	YjcQ protein. YjcQ is a protein of approx. 100 residues containing four alpha helices and three beta strands. It is expressed in bacteria and also in viruses. It appears to be under the regulation of SigD RNA polymerase which is responsible for the expression of many genes encoding cell-surface proteins related to flagellar assembly, motility, chemotaxis and autolysis in the late exponential growth phase. The exact function of YjcQ is unknown. However, it is thought to be a prophage head protein in viruses.	MPKDDYFRIVFEILKDLYVAKKKAEPVNLIKISADYLKIPQGYRDTILSEMLEAGYVKGFRVKEYINGIQIMDLEDIDITPVGIEYLKENGMMKKVMEYLKTIGEFIPMI*	mmseqs_cdd	nonviral_gene	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0005	cloud	indirect	.	.	.	GCA_019929305.1_01688
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	8162	8368	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	2472	2678	GCA_015256085_1_101_7	GCA_015256085_1_101_7	-	11500	.	.	hypothetical protein	MESVWKYKAEDFKYLQKYFDVDFLNSDANILDALNEKIIEVGFDDKLEFYNDEGKKLQEIYDNIYYMN*	.	hypothetical_protein	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0006	cloud	indirect	.	.	.	GCA_000238135.1_01335
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	8380	10125	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	2690	4435	GCA_015256085_1_101_8	GCA_015256085_1_101_8	-	11500	.	CDD:pfam06152	minor-capsid-protein	MSFFILTKQTKRVMLSPEYLAQCTSYLLGMMDLINEQLVADIARRIVKMGALTESAQFEAEKLTQQNILYKDIVNSISKVSGLTEAEITRVFEDVNFENMESENLRAAIAGKTPLDHASNVAMGNLLSSHIRKTKGVVRNLTRTTASQGQNAFINAVNLANMQVSSGAFTYDFAIKNAIKQVAKSGLTVQYPTGHIDKLDVAVRRAVLTGVNQSSAELNMLYCDEIGTDLVEVTAHSGARPSHADWQGGVYSLSGKSKGYGSFYDITGYGTGEGLCGWNCRHSFYAYYEGTERTYSKEYLDSLDSKTYEYGGDTYTNYEAGQKQRAYEREIRAEKRYLAGLNSAYNEAKDDTLRQSIKYEMESTAVNLKRKEAELKHFCKATDRRVDTTRTQVHAVKDASGKIVGFDRSAAQRARTVAIKHHTDWLKSIGAESSELKVLDKYYDAKYNNSPAYKNLINYRFLVSKGEISPLLSYKVYDAYSRAVQNNLVGVQTPLGLQIEGYTSHFVGRVIGYSALNRKYNRPGVSIEDLLDCLKVGRVGKEQVNKAGERSILLKNDKCNIAINPDTKTLIQCNPRKLVKR*	hallmark_hmm	common_virus	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0007	shell	indirect	.	.	.	GCA_015255825.1_00744
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	10171	10365	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	4481	4675	GCA_015256085_1_101_9	GCA_015256085_1_101_9	-	11500	.	.	hypothetical protein	MKKRNMVDAIKKISGTKIQSNRVPLIGALSITEKRGFQGLSINDQRLCNYGKNCSYSTGNNSYN*	.	hypothetical_protein	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0008	cloud	indirect	.	.	.	GCA_015255825.1_00743
GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote	cenote	CDS	10365	11225	GCA_015256085.1	JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085.1_JABZMU010000042.1	GCA_015256085.1|JABZMU010000042.1	GCA_015256085_1_101	GCA_015256085_1_101@C1	4675	5535	GCA_015256085_1_101_10	GCA_015256085_1_101_10	-	11500	.	pfam01972	Serine dehydrogenase proteinase. This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan.	MINPIILKTSQMIKDLLEELENLYDADCLYLNGPIEPNLLNHAREVIDLTRKADSHHEKLCVILTTNGGDAITVERLVNIFRYNYSEVDFIIPDHAYSAGTILCMSGDNIHMDYNSVLGPIDPQVQNKEGRFVPALGYLGKIEDLLVKAQAGTISEAEFLILKDFDLAEISLYEQARDLTEDLLVKWLVQFKFKNWGTHSSNGMGVSEDEKRERAKEIAKALSDYSRWKSHGRPLSIEVLSELKLQIEDFGQSHDKQNLILECHNMCEDFMRLQQTNGIIFTRRTL*	mmseqs_cdd	nonviral_gene	C1	5810	5691	11501	GCA_015256085.1|JABZMU010000042.1@region_5692_11501@tool_cenote_CDS_0009	cloud	indirect	.	.	.	GCA_001648315.1_01281