core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	1	233	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	1	234	GCA_015260495_1_50_1	GCA_015260495_1_50_1	+	8374	.	pfam17642	Hemolysin coregulated protein Hcp (TssD). T6SSs are toxin delivery systems. It is a multiprotein complex requiring numerous core proteins (Tss proteins) including cytoplasmic, transmembrane, and outer membrane components. The needle or tube apparatus is comprised of a phage-like complex, similar to the T4 contractile bacteriophage tail, which is thought to be anchored to the membrane by a trans-envelope complex. These tube and trans-envelope sub-assemblies are linked via TssK. This entry comprises family members such as the inner tube protein Hcp (TssD). Hcp proteins form hexamers that stack to form the inner tube/needle structure of the puncturing device. Other functions have also been described for Hcp proteins, for example, some Hcp proteins have been shown to have a chaperone function in that they bind to and stabilize effectors. In addition, there are evolved Hcp proteins that have the Hcp domain at the N-terminal half of the protein and a toxic effector function present in the C-terminal portion of the protein.	IEAMLNSQFKPVEGKIVYKKSEEDAKMKEISFKNAYIVHYKETLDVNNEAPMTIAMTFSAENITVGNAELDNRWPRT*	mmseqs_cdd	nonviral_gene	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0001	shell	direct	moderate	224	0.961	GCA_015260495.1_01812
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	521	2263	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	522	2264	GCA_015260495_1_50_2	GCA_015260495_1_50_2	+	8374	.	PDB:1WRU_A	Tail-protein	MAVELETGSNRYVHNINSSKKWLGESIVVKAANTPIFVGVVTNVQLHREGSDFGCIIVSGYSATYRMETAHSCFSWNDRTIGDVVKKLCEQAKVQLELNPAFKETKDFICQYEESDFDFIRRLAHQYQEWMYFDGTKLIFGKPRKLADPIRLEYGTTLSSLDIGLQTLARSEQVFSYHSGADREMQRMTPDLAYGHDKLAGEAFRASLGMFSKPARQHALPRISNETELVNYMGRKQAAETAETHYITAESQVPTLRVGSVVSLYSSFLERVGNLSEESLGNFIIIEITHEVSQGSYYKNRFKAIPATIKALPSPKVRMPLAETQMATVLSNADPEGKGRVRVRMNWQTDGMQTGWVRVMTPDGGSSSDVKSNRGFVFIPEVGDQVLLGFRHGDPARPYVMGSLFNGTTGGGGLEGNHMKSLTTRSGHTIKLNDSLSSLGITIKDIKGNSIHIDSVGDDIIINAKRNITINAGETFTVNCKNANILAEESINMNAEQDITSVSGESTSIQAGESLTEIAADSYVLSANDANVQVTEEHNLQASTISETAEKINIDSTMEDLDLSSPKKVNIQSSEKVNLF*	hallmark_hmm	common_virus	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0002	shell	direct	high	1742	0.999	GCA_015260495.1_01813
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	2267	3058	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	2268	3059	GCA_015260495_1_50_3	GCA_015260495_1_50_3	+	8374	.	.	hypothetical protein	MYIPFKVPTGSCKVHGVRTEVMPDGVSETKCEVSIEFAPLSKDSKVKAVVYLHAIADEDDATASFVHDIESTLNPICLELDNRGKCVRISDHDELCKRWDDSLFLLRAKYEGEWVEKELQLLTDRVHDKGLLLNMMKRYYVFSEWMEADWSGIEFIEGKGYREHEETALGVPLLFLQECSIEDNEEGMSLHIVGNADLRKNEVQLEKISLLGEAQIENITSIEQHCIVKTDRITEIPQSIHSHYTIKGREQILKDIEISLTFQ*	.	hypothetical_protein	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0003	shell	direct	high	791	0.999	GCA_015260495.1_01814
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	3065	6097	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	3066	6098	GCA_015260495_1_50_4	GCA_015260495_1_50_4	+	8374	.	COG3179	Predicted chitinase  [General function prediction only]. 	METGKNTSADRNRKQTGKSEEIVADSAICTCDKGSKPGTFRVTSQQKIYCNGARKLVATDQDKDIKSLNFGSCAAKNNGPCSPNIVWSNTYNKIAIKGKMYPLTVKSSGTCKAGGGRINIQTSGQQVVVKPSASPRKANSTAHKSPVFTEEDWKHLPQEDEKSQNKRVPAAVQVNNVLVNGKREITITPYDQEELLFTTSLTAGSMRGTGVKWDVCHGNRVIAKGLTEAPARTYFTKEGTYSVYAYVHKPGSPKGKGVVTITVSYPKFKSIEWKDENGKPVTYIGLRNKVFAHVSLPGCKGIPVNCRFYYNGYEGKTYLSALTPITLSAAGKVKIALSLSSDQLKKIKEDRKRFSNGQKIKIYLELSSRHWIENLTKVSQHPILFNDTIEFRSLIIYKDSDCKEKLQGGIADSGSIVYVRVSTANMETGKIRLDVYKHETGNQEEKSPKPSPVYSTSCPVNSTGVYKFSLTLAAPPYKEGTAYKVVVSWIFSSQSSNGNVNNNTDRQTSKEPKQYILKGKEILFSVKRHIPTPKAEPSKANVNRTEPEKGGCPRCNKDVTLEEIKRICVDEKGNCLIKDTTMIAAALPYLNQYRKKVGINTCVSKAHFLAQIAGETKFYRLQEDFTYRNWKSMLTHFSSYFESFASIEEREREAQRLSNISIQKGEKYQKIVANTVYGPRHKYGKQHPNKDDGWRYSGKGFKQIIWKGNYKGLQDYTQKNFGVSVTWVGNDNPFLLKIDPRDSILSALAYWKKKGINEIAHGITDQNVDNVTSKINESKGESIRAPRRFFFHNAIKVLHVKECLTGNHLQEKNKNCTFDGKFTAHENEVYIDVITPKNRDKEGPLVVFDNKKILFITHSLCRGTNTNRLKKGGNGDTPTGKTKTTYEPKKHVGSTSFGKYGLILLEGIQGEFLTATKNGRSGIAIHSGHTVGFADKINDNGMLMSTYGCIRVYNSAMEKLGELYTKYKKEGKKIFCYIEDYNGDINDVYSFYEFKRDGKDRKRNARSKKQ*	mmseqs_cdd	common_virus	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0004	shell	direct	high	3032	1.0	GCA_015260495.1_01815
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	6094	7314	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	6095	7315	GCA_015260495_1_50_5	GCA_015260495_1_50_5	+	8374	.	.	hypothetical protein	MKMNRYILFCLSHILLLSCQGQSKSSNVSKDSIYVNSKMMDQQELMQTSILSKYGKDNGYNPLSYQDFQNRCMEYWGLSLHKEPKDYVLSIGGYTEYTINEWGRFLYTEAENLFYQPEIDGEPTKEDARKMLYDKENGIADKFLAYNKLLFNDNITTLSFFIRNPEYAIDVVFNHDYERNKILTARSIDFSKKTTDYSVYRDNTEKVLFYNNRKRGFRRNLINEIYLSCNKTQETMAPFDDLVYAYFKQFKQLNYPQDVKDKCLVHLLKCLIEYDRNHKDAIIGIEDEKSYQHLSNFMSKDKHLVDRLKKQDYYGVMRLKELVDIVLVMENDINPNDIYFVDDPDGYTNLREKGMLSSKVLKHVPTNEMITILDNNGNWWKVQVKDGTVGYIHKSRIRRALQNVCQ*	.	hypothetical_protein	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0005	shell	direct	high	1214	0.994	GCA_015260495.1_01816
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	7410	7916	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	7411	7917	GCA_015260495_1_50_6	GCA_015260495_1_50_6	+	8374	.	.	hypothetical protein	MAKKELSLTSSQVEEIKKVPIEKTPIYMELFSKEWVKDLKLSKKTPIEYTDKEDITSIAFYRDKDCKEAIKGFVESGQTIYARVTTRGLDDSDIALFIYKHGTVTEEETSTKGGVYKVSGETDAKGITVLKIKTDTSWLKEKQSETFDIFVLEGGAKETAVIRFNRRN*	.	hypothetical_protein	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0006	shell	direct	high	506	0.998	GCA_015260495.1_01817
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	8083	8253	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	8084	8254	GCA_015260495_1_50_7	GCA_015260495_1_50_7	+	8374	.	.	hypothetical protein	MGSSKGNWGRYGLQAFGISVLGPLFLDVSSFLATLQPTEWRLHIAASHGMTEPLWM*	.	hypothetical_protein	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote	cenote	CDS	8199	8372	GCA_015260495.1	JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495.1_JABZWL010000055.1	GCA_015260495.1|JABZWL010000055.1	GCA_015260495_1_50	GCA_015260495_1_50	8200	8373	GCA_015260495_1_50_8	GCA_015260495_1_50_8	+	8374	.	COG3501	Uncharacterized conserved protein, implicated in type VI secretion and phage assembly  [Intracellular trafficking, secretion, and vesicular transport, Mobilome: prophages, transposons, General function prediction only]. 	METAHSCFSWNDRTIVDVVKKLCEQAKVQLELSPAFKETKDFICQYEESDFDFIRRLA	mmseqs_cdd	nonviral_gene	NaN	.	0	8374	GCA_015260495.1|JABZWL010000055.1@region_1_8374@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.