core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	59839	60357	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	1	519	GCA_015263565_1_74_62	GCA_015263565_1_74_62	+	115298	.	TIGR01313	carbohydrate kinase, thermoresistant glucokinase family. This model represents a subfamily of proteins that includes thermoresistant and thermosensitve isozymes of gluconate kinase (gluconokinase) in E. coli and other related proteins; members of this family are often named by similarity to the thermostable isozyme. These proteins show homology to shikimate kinases and adenylate kinases but not to gluconate kinases from the FGGY family of carbohydrate kinases.	MTTHFVMMGVCGCGKTTAALSLQKHLNQCPYAEGDDFHTQSNRDKMGAGIPLTDEDRYPWLGNLRDWMTERAKNGEKYSIVTCSALKHHYRDILRGAEGNVAFIHLTPPQAINLERMLSRQGHYMKAGMLDSQLEILEELGADEYGVKIDNPGSPEAVEADIVNWVKAQGLI*	mmseqs_cdd	nonviral_gene	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0001	persistent	direct	high	518	0.998	GCA_015263565.1_01709
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	60542	61492	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	704	1654	GCA_015263565_1_74_63	GCA_015263565_1_74_63	-	115298	.	PFAM:PF01548.16	Transposase	MYLGIDVSKLTIDCYLIADGQNHQKKFQNNKGGFEHLIKWLQSHKVSDKLHCVCEATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWQPPAKEQKQLQEIARYLDYLKKQRATEKAKQHEAPDYIKSHIQTTISNLTAQIKIVKKQLLQFYKDNPSYNDLRKRLKTITGIGEQATAILLSTYKRHEFKNAKQFTAYLGLDPRKYQSGTSVNGKSRISKIGSSELRKSLYMPAVVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIAFTLLQNGQDFQVERYK*	common_virus_hmm	common_virus	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0002	shell	direct	high	950	0.999	GCA_015263565.1_01710
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	61904	63088	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	2066	3250	GCA_015263565_1_74_64	GCA_015263565_1_74_64	-	115298	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MLYLITGVPGSGKTLKMISDLMTRQDLKNRPLYLDGIPEVDEKIIPNLPIPEGETMQTWHKWAPTGAILVIDECQRVFRPRPSGSKVPDFVAELETHRHKGIDIFLLTQHPRLIDSNVRALVGHHCHIGKTNLGVRRMLEWERCADPTSSRDVSSAVKSVYTLDKKAFGVYKSAEEHTKIKTKLSRVVYIFPAVLALLITAGWYIYSSWNNRIDTMKAEQEKPKIEAQASSPEAVGAVAVPTANGTNAEGQYSPQTAIPEPPKPHLSEDDYKPRIEDRPETAPIYDGVNKSITAMPWPSACVKSDNGCNCYTDQGSKIAEISKKTCLSYIKDGLPFNPYKAKKTETAEVKETVQETERPQVLSMGGKSQQNLMYDGYVEKGKEIGAQNGAKTGS*	hallmark_hmm	common_virus	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0003	cloud	direct	high	1184	0.999	GCA_015263565.1_01711
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	63101	63379	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	3263	3541	GCA_015263565_1_74_65	GCA_015263565_1_74_65	-	115298	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MWGKLITSVLMTVAGKVITALGLSFVSYVGLNEIQGFLLSHVQSQIGGIPSDAMNLAYIAGIGVCLNWIFGTFAFVVSLKSLSKLSASISKK*	hallmark_hmm	common_virus	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0004	cloud	direct	high	278	0.996	GCA_015263565.1_01712
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	63382	64932	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	3544	5094	GCA_015263565_1_74_66	GCA_015263565_1_74_66	-	115298	.	PFAM:PF05616.12	attachment-protein	MNKLVIPLLVLFTSSFAIAGEINVNNSKSITYTKQHTEHWEKKSWARSVSDNSYRKFQTEAMKARYEGYLSKQTVNATIEASVSRKTVLNGSFALVKQGAKLVASRANVYVGGALLAYEAYQAVKSDLEFEGYKWDEAKEEFLKEWPARNCIWVRDERDIVQDVACYGVDSSVLSAYRKGGKSQREAEELMKGQMEKLAGPFWEKRKKELDKDLNSKFWEYYHLDECRFNLNGGGCSVKRGSDGRSTVSFRLKMRDTEILDNEKFLQISTPSIDSNPTPFVEGTGKPEYQENIKVPSGTVVTIGPVETPEGKKTYTVTFTNPSNGGSSEASVQTNNSPAPTGNTGGSTDGNPNSNPDGKPDGKPDGKPDGRPDDSPDDKPDSRPDDRPDDKPDGKDGEDGKDGEDGKDGKDGKDGKDAQDLCEKHPEASACKDLGDTDYKDLEIPEKAINLELKPLDIFSTNGTCPANPTFSLGVLGTFEIPYDYFCNIARLLRPILILGTIIMCGFFAFNAVKEL*	common_virus_hmm	common_virus	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0005	cloud	direct	high	1550	0.999	GCA_015263565.1_01713
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	64925	65227	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	5087	5389	GCA_015263565_1_74_67	GCA_015263565_1_74_67	-	115298	.	.	hypothetical protein	MFNRIYNLVFIFLFTLHILGIISIPNEIRYLMIAFYLILLIYSLLNKKTNTELNGDDDIFVMTTNPNKPSPFDPNMEKFMNDLNQSMEKKKLDKIKVKNE*	.	hypothetical_protein	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0006	cloud	direct	high	302	0.997	GCA_015263565.1_01714
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	65288	65377	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	5450	5539	GCA_015263565_1_74_68	GCA_015263565_1_74_68	-	115298	.	.	hypothetical protein	MTPEIEFLIGMLPPFAVAICLYVLIRSFQ*	.	hypothetical_protein	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0007	cloud	ambiguous	low	3	0.033	GCA_015263565.1_01715
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	65374	65676	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	5536	5838	GCA_015263565_1_74_69	GCA_015263565_1_74_69	-	115298	.	.	hypothetical protein	MGYQVGRICYETEQEAVNVLMTQVSPTIDKDGVLHHAVFDGKAWKYQEQTVKLTFPQCEFGEFAQAGRELGYQLVLMMVSLFLIVIAIKAVGMISNKEEE*	.	hypothetical_protein	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0008	cloud	direct	high	302	0.997	GCA_015263565.1_01715
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	65686	65907	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	5848	6069	GCA_015263565_1_74_70	GCA_015263565_1_74_70	-	115298	.	CDD:PHA00979	putative-major-coat-protein	MKFQNLKNKAKYALATVAVSAMSAPVMAEGILDTVKQEITGYKAEIIALGAIVVGISIAFAVIRIGKRGANAV*	hallmark_hmm	common_virus	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0009	cloud	direct	high	221	0.995	GCA_015263565.1_01716
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	65994	66263	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	6156	6425	GCA_015263565_1_74_71	GCA_015263565_1_74_71	-	115298	.	.	hypothetical protein	MTQETERRQGMFVIASFDRMFTRERKNQDGTFTKTHYVGLIIRSETETRLCEVRTKHPEKYEGYKPQQIVSMQVFPRAFKDNIYFSDEA*	.	hypothetical_protein	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0010	shell	direct	high	269	0.996	GCA_015263565.1_01717
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	66281	67186	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	6443	7348	GCA_015263565_1_74_72	GCA_015263565_1_74_72	-	115298	.	PFAM:PF05840.12	Rep-protein	MNRSASASAERALPCLNSNNCIETENSLENKEKQFPVNAEKFTKSNENLNEFSTSHKKSASALEMNVHQFIEAFGINNVGFLTLTFADDVQDVKEASRRFHSLRTNFLKRHFEHYICVYERMKSGRIHFHLIVNTRQNIRNGLNFRQIQAKNYSSANKALRQLWVLLRENMGKYGFGRSELLPVKTNSKGLARYVAKYIAKHIDSRLPEDKGYRLIRTTIDKKHLWKMANSNFSFVSAGSRKWREQLRKWISRIDSYLKSMPLYKLRPYESINQDNYNHILSSYLSPKWAFKNRETIVNLI*	rep_hall_hmm	common_virus	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0011	cloud	direct	high	905	0.999	GCA_015263565.1_01718
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	67183	67401	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	7345	7563	GCA_015263565_1_74_73	GCA_015263565_1_74_73	-	115298	.	.	hypothetical protein	MSICFYTITPQPEQNPVAYIIRIFSDKNGYSKLINTRAFPVTNPQNPKATEETAYLYGELCVTDFMNQEDNA*	.	hypothetical_protein	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0012	shell	direct	high	218	0.995	GCA_015263565.1_01719
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	67531	67992	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	7693	8154	GCA_015263565_1_74_74	GCA_015263565_1_74_74	-	115298	.	COG1490	D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]. 	MRAVIQKVTQAKVDVFSENSRETCGKIDNGFMILLGVTHADTETDAKYIADKTANLRIFEDENGKLNLSLKDVGGSILLVSQFTLYADARSGRRPSFSNAAPAEQADKLYQYTAQLLREHGLTVETGRFQTHMQVSLCNDGPVTLLLDSQKTF*	mmseqs_cdd	nonviral_gene	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0013	persistent	direct	high	461	0.998	GCA_015263565.1_01720
GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote	cenote	CDS	68090	68854	GCA_015263565.1	JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565.1_JABZQN010000002.1	GCA_015263565.1|JABZQN010000002.1	GCA_015263565_1_74	GCA_015263565_1_74@C4	8252	9016	GCA_015263565_1_74_75	GCA_015263565_1_74_75	-	115298	.	6BHF_A	Putative peptidyl-prolyl cis-trans isomerase HP_0175	MNIKPKTAVLAILTLSTIGLATAKAPDIDPARIDSMVAEVLRQADQHPNQTAKPDGQAIRKDVVTRLQTLEILKNEAFKAGLDKDAEVQNQFKNVEAEFYANQYAAYLERQTAVDDAELRRFYDQQTRIIKLQQVSFASADEVRAAQELLLKGLSFEELMKRYPNPEQEFDGFISPQQLPPQLAVAFADMTRGDVTHEPIQMENRFYLFKLSAVEHDPNAEPFELVRSQIAQAVKRQKVNNQIERILKENGINP*	hhsuite_tools	hypothetical_protein	C4	9016	59839	68855	GCA_015263565.1|JABZQN010000002.1@region_59840_68855@tool_cenote_CDS_0014	persistent	direct	high	764	0.999	GCA_015263565.1_01721