core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	2	1231	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	3	1232	GCA_015548685_1_12_1	GCA_015548685_1_12_1	-	35616	.	PFAM:PF06152.10	minor-capsid-protein	MAKNKNTEYWEKRALELEKIKDTRVRATQKDLHKINRDISKRMKRNIHYWVSRFARDNGLTYAEAMRKLSPEEIKEFRMDVDEYVREASKITDGTPDEKLLKIANASTSYHFTRLELLKIQLINSVNELISKENDLIFNFLEDLYKDIYYRNTYDIAKGIGAELNLFTPNEYAIKLLVKKPWTEDGLEFSERLWGPHKDKLVKELDKSLKDSISRGENAIKMSDRLADTMGVRKDHAEALLHTESARIAEEARFDNYKDLGVEKYIIVATLDHKTSDICRRMDGKAFLVKDKKVGDTYPPFHVRCRTTTAPYDLDEHSIGPRAARDKNGKTIYVPKDMTYPEFHKKYIESDKEYSALEKAWKNRHSDKKLHKKYRKIYGKDIPKSFEDFQKLKYNNSKELEDIKFRHKLK	hallmark_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0001	shell	ambiguous	low	13	0.011	GCA_015548685.1_00777
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	1218	2669	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	1219	2670	GCA_015548685_1_12_2	GCA_015548685_1_12_2	-	35616	.	PDB:2JES_G	Portal-Protein	MFNWIKRGVSKLNSLINKPEDKAASNMTYIEYLVSNFKNSETRQNQIIGCNYYKNKHDILKRKKYLTMKDGTKRELLNTPNNKRIDNQYAIAVDKKKNYMLGMAPTIKSDNEELDALIEPIFNSRFMKAAKNLLKDSLNCGIAYLHPYVNENSELRFKRFKPYEILPIWVDDEHEELKFFIRLYSQKEFIAGREVTVEYADVYDSERIVRHKVSGKSLIKLDEIPHLVDTDGKGYSWSGKVPLVAFKYNDDEIPLICKVKSLQDAINEVLSDYNNNMQQDARNTILVIKNYDGANLEDFRENLASAGAVKVQSDGGVDTLSIEVNSENYKAILEILKKALIENAKSFDAKDERLGANPNQMNIQSMYSDIDLDSNDIETEFRASFEQLGTFVKMYLEATTEYVSSDKDKIDIIFNKDVLINESQVIEDINNSMGLLSTETLIENHPYIDDPAKELERIKSERAEQEPVEINTYGLGGEPDGEE*	hallmark_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0002	shell	direct	high	1451	0.999	GCA_015548685.1_00777
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	2681	3940	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	2682	3941	GCA_015548685_1_12_3	GCA_015548685_1_12_3	-	35616	.	PDB:5OEA_B	Large-Terminase	MISKKIKTSDVVIPKFHDFWRDRKNKDILNYVLKGGRGSGKSSVLAQGLIIDLVQQPITILCVRKVANTLMDSCYEQLKEAIDQLGLEGKFEILKNPMKVTYRPRGNSIIFRGADDPGKIKSIKASKFPIARLWIEELAEFKTEDEVTTISNSILRAELPDGLDYKIYFSYNPPKMRQSWVNVKYESVNVPDNTRVYHSSYLDNPYISRQFIDEAEHIRDTKPLKYRWEYLGEAIGSGVVPFDNLKFENISDEQISNFDNIRQGGDFGYATDPLAFLRMHYDKTRRTLYIFDEIYGVKISNRQLANMIKTKGYHTTMTIFDSAEPKSIDEIRGYGIRCKGAIKGPDSVEFGERWLDDLENIIIDPTRCPNTAREFESIDYESDKNGNPLPRLADKDNHTIDACRYGMSNDMKGNTYSFD*	hallmark_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0003	shell	direct	high	1259	0.999	GCA_015548685.1_00778
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	3930	4364	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	3931	4365	GCA_015548685_1_12_4	GCA_015548685_1_12_4	-	35616	.	PFAM:PF03592.15	Terminase-small-subunit	MIYHGLTLKQKKFADEYIISCNATEAYLKVYTSVKKENVARTNASRLLTNANVKNYIDERLSEIDSEKIADQKEVMEYLSSVMRGEQTEQTLKSCGAEWGQEITDIEVGAKDRIKAAELLGKRYGMWTDKIENSTEVVVIQDDI*	hallmark_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0004	shell	direct	high	434	0.998	GCA_015548685.1_00779
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	4409	5044	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	4410	5045	GCA_015548685_1_12_5	GCA_015548685_1_12_5	-	35616	.	.	hypothetical protein	MEELAKPNTSIVIKFGEKENLRMLQQGDLYVCPLRKYVEDEKLQYGISDENEGVSKCGTVKYKVNLDYPIFCLYRPDYGTSKGVNTITYVKDIFNMYSHALVIDANKLYEKISESCGKEYTFAYHDVVYGKCSKLIKAPFQKNTEFKEQNEIRYVFLDLRKYLGKDINGVDKYGAPIISANGEVFLKLGDLNSISKLVRKEELDGMEFYID*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0005	shell	direct	high	635	0.998	GCA_015548685.1_00780
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	5388	5885	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	5389	5886	GCA_015548685_1_12_6	GCA_015548685_1_12_6	-	35616	.	PFAM:PF05263.10	transcriptional-regulator	MATDEYKRTEKWLYRYKDLPSAIRQYNLQIEAVKNDIRGCGAIKYDSDRLSQSYNISKSVENEVILREKKIEELESKKRVLEIHKEKLDIAINNFNHEQTEIFKYVYLKVKPEWTVRRIVRELAISQSTFYRIKKELVHSAINSMNPDRTLDFIENQFKVKEKCK*	phrogs_hmm	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0006	shell	direct	high	497	0.998	GCA_015548685.1_00781
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	5965	6660	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	5966	6661	GCA_015548685_1_12_7	GCA_015548685_1_12_7	-	35616	.	PFAM:PF07141.10	Small-Terminase	MVYVAKKWTRERIELVRKYLHKGFTDKEIAEIMTDIEGEKNYRYTPSIINTTISTYQLLEGISLKALVKSGRKVKWSDELISEVIDLANKGFTDYVIADIMTEKHEVKFTQKQISGVRSRRRIQKPNKKSAEEKDKKIDNTDYYKRMAEISLKTIRDNRQQTARIRKFNLEEGKLYTIKTDNTGSNNRRGIKVYRDLKFLYMTDYVLYFKDKHGITKSFIRDNNSVKMLVI*	hallmark_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0007	shell	direct	moderate	687	0.987	GCA_015548685.1_00782
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	6661	7617	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	6662	7618	GCA_015548685_1_12_8	GCA_015548685_1_12_8	-	35616	.	COG0756	dUTPase [Nucleotide transport and metabolism, Defense mechanisms]. 	MELKLLKVRENAILPKYVHGNEDTGADLYVSKVKYFKDGELTECLNPDGYVLQPFETILCLTGFKIEVAEGIDVQIRPTSGNSLKTPLRIPNSPATIDSGFRDEVGVIIQNVSNNRFKVNIGDKIAQMVIAKVEHPSIIEVDKLSDSNRGDNGYGSTGVAGEKKEEKSKLRYKVGDEIILKSNLKDCDKFDNHGLIYNDEMAFLKEELHKIESINNLNYYKVAGYSIVDDMIDHEKTLFLNSTTETERSFLKLLVGYYDWIAKDESGEVYIYGEKPYRDTGAEKVYWDAYDAEIALDLQFLNLKWEHLGIEQPVKIFR*	mmseqs_cdd	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0008	shell	direct	high	956	0.999	GCA_015548685.1_00783
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	7630	7956	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	7631	7957	GCA_015548685_1_12_9	GCA_015548685_1_12_9	-	35616	.	.	hypothetical protein	MINKKVVIAAVLSCVINLSCGCYIGYRLAENDIKNYIGRVVSKEHQPREVRFEKQKEWIDGELKEVENPVMLDETFTLKVEDVFGSVTSVDVTKEVYKKFEIGDKYRR*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0009	shell	direct	high	326	0.997	GCA_015548685.1_00784
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	7953	8507	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	7954	8508	GCA_015548685_1_12_10	GCA_015548685_1_12_10	-	35616	.	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain [Transcription]. 	MNQFEKKEVGQKIREIRENNKMSDGDFAKAFGVKVKVVREWEKGVNLPNPKKLDKVLNFKPSKKPASKPQDKKKTKSNTNAKKKVHVVTDEQMEVIRQKQSELAFARVFSVMLSLPILALAEEGYGKKRLNRFIDRTLLLLREVEQGRMNIWEVNQEIKEKYGIDISVSDDLQIERKGEKEVFA*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0010	cloud	direct	high	554	0.998	GCA_015548685.1_00785
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	8557	8922	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	8558	8923	GCA_015548685_1_12_11	GCA_015548685_1_12_11	-	35616	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MGRLTRDPELKYMQSGTGTINFTVAVDRDYKDNSGNTPVDFIPVQFMGKQAETIANYFNKGSMIAVIGSMRINKYEKDGQKRDFTFVAGKSFSFIAGSKNEGRQVSGQPEFNAVDDDEVPF*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0011	shell	direct	high	365	0.997	GCA_015548685.1_00786
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	8951	9706	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	8952	9707	GCA_015548685_1_12_12	GCA_015548685_1_12_12	-	35616	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIQAFNSLEFGQIRTINIDGEPWFIGKDIAAALGYKDTSDAIKRHIFDEDKLTRCFTDSGQGREMTIINESGMYSLVLSSKLEKAKLFKRWITNDILPSIRKHGMYATDELVNNPDLLIQVATQLKDERTKRQQLELKEQENRPKVLFAESVEASKCSILIGDLAKLIKQNGYNIGQNRLFEWMRNNGYLISRRGESYNMPTQQSMNLGLFEIKESSVVNPDGSVRLTRTTKVTGKGQVYFINKFIERN*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0012	shell	direct	high	755	0.999	GCA_015548685.1_00787
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	9751	10053	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	9752	10054	GCA_015548685_1_12_13	GCA_015548685_1_12_13	-	35616	.	.	hypothetical protein	MQDNRLEQIEKEIGPVETRPYTGAIDRHGNKIYLGDVVSVPDVFEYEDGTREFKHNRAVVVRCGNEYGLSCFELKGKLEGRLRNKEIDLNKVIQVGHVVE*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0013	shell	direct	high	302	0.997	GCA_015548685.1_00788
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	10238	10618	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	10239	10619	GCA_015548685_1_12_14	GCA_015548685_1_12_14	-	35616	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MLNLTLYGRPITKKNSSRIVNCGGYTRLLPSKAYVQYQKDSLRQITGRDRVKIDQPINLKVLYYMPTRHRVDLVNLLEATCDILVDAGVLADDNSKIVVSHDGSRVLYDKDNPRTEIYIENIKEMM*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0014	shell	direct	high	380	0.997	GCA_015548685.1_00790
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	10611	11081	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	10612	11082	GCA_015548685_1_12_15	GCA_015548685_1_12_15	-	35616	.	PDB:4M4W_K	Replicative-helicase	MEYVKTKAYEKHESLIIMGQVGSGKTHLSMAIVNNLLAKGVRCRYLEYRSFMALVKQSLTDRDTYQRELDIAKRAEVLYIDDFLKGKVTDADLNIMFEIINTRYLADLPVIITTELTPDAIIKFDEGIGSRIMEMASNYILISQGKNKRLEVFDNA*	rep_hall_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0015	shell	direct	high	470	0.998	GCA_015548685.1_00791
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	11287	12090	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	11288	12091	GCA_015548685_1_12_16	GCA_015548685_1_12_16	-	35616	.	PFAM:PF09681.9	phage-replisome-organiser	MITLLLMANHEPKKWIFKGEKFECKAGQFITSLPSIQEKAGKDISIMQIRTCLTKFEKHGFLTCKSTNKNRLITIENWALYQNKDDDVTGNLTGNQQATNRQLTANKNVRMQECKNNSIKDTMYVPLESGDEVKNEKLNMKSQIDQVVKAWNDIEGLQNIIGVKRNTQRYKLLVGRLNEYGLDKVLECVHSVQHSSFLMGYTSENGWSAKFDWIIKPANFIKVLEGNYNDKVGGEAGGRDRADNPANESKSENKYAGYDWTRFNKFK*	rep_hall_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0016	shell	direct	high	803	0.999	GCA_015548685.1_00792
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	12146	12331	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	12147	12332	GCA_015548685_1_12_17	GCA_015548685_1_12_17	-	35616	.	.	hypothetical protein	MIIEQAVKSAMRKLEWQKEKGYIKSFSELDLRKEAEQVYHLTNKYFGGGVSDRQPRLDKVT*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0017	shell	direct	high	185	0.995	GCA_015548685.1_00793
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	12328	12969	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	12329	12970	GCA_015548685_1_12_18	GCA_015548685_1_12_18	-	35616	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MKAYEILTKIQCELKAPKNQYNYFGRYHYRSCEDILEALKPLLNKHGASLFIQDDIVPVGDRYYIKATCTFCVGDETISTSALAREEESKKGMDGSQITGTASSYARKYALNGLFLIDDTKDTDTNEYHKQTGENANKQTSRPGAGSGKTDKLVTESQLSRLYAIGSSKGYDKSDIDKSVHKKGKQSAKDLTVQEYNEIVAGIEKAPIKGANK*	mmseqs_cdd	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0018	shell	direct	high	641	0.998	GCA_015548685.1_00794
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	12978	13502	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	12979	13503	GCA_015548685_1_12_19	GCA_015548685_1_12_19	-	35616	.	PFAM:PF05565.10	resistance-protein	MASLYELSNDARKLEDLLDNLECLGDEQAVEETKNIQNIVKKLIEGKSEGIIAIVRELDLSVENIDSEIARLKELKGRKKRRIDSLKGYALDCMQSMGVKKIETNLGNMSIRKGSGKVNILDAAKIPEEYIKTEIVKKEDRRAITNAIKSGIEVEEAELVYNDSLILPKTPKEK*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0019	shell	direct	high	524	0.998	GCA_015548685.1_00795
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	13529	13729	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	13530	13730	GCA_015548685_1_12_20	GCA_015548685_1_12_20	-	35616	.	.	hypothetical protein	MEEILQDVIDMARDNSNLYQMLLDAKDAEIRQLRANYNEARNRINSLEEENIRLGAELEKQDPRPF*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0020	shell	direct	high	200	0.995	GCA_015548685.1_00796
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	13785	13919	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	13786	13920	GCA_015548685_1_12_21	GCA_015548685_1_12_21	-	35616	.	.	hypothetical protein	MNWDKFVFNFTAALGYAILIAWEYIKIAWIKWQDLGEENKKGPH*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0021	shell	direct	high	134	0.993	GCA_015548685.1_00797
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	13932	14306	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	13933	14307	GCA_015548685_1_12_22	GCA_015548685_1_12_22	-	35616	.	.	hypothetical protein	MSWEKGLVKVLFDSNRAEVKELLVEVLKEHPELIPKAELRPKRMLRNKDIIKKYNVHPGTATSRINEFNEEYLRIDSKVPRSSLQWLNPKTRVVDEDVFDWFLANRLELGDSNARKRISAYKSN*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0022	shell	direct	high	374	0.997	GCA_015548685.1_00798
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	14460	14726	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	14461	14727	GCA_015548685_1_12_23	GCA_015548685_1_12_23	+	35616	.	.	hypothetical protein	MTDNVNKILKRSLEYMKQNGSDKIVLRARNQDELIAFINTFPRLIDEGFIIPISDNYDLNTYDIIKDTLFEFKLTYKAMDYCERQNLK*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0023	shell	direct	high	266	0.996	GCA_015548685.1_00799
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	14692	14886	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	14693	14887	GCA_015548685_1_12_24	GCA_015548685_1_12_24	-	35616	.	.	hypothetical protein	MKDLISIYYENEKELADELVCEELKSEINKLTSKELANNLEKVLFIPETGKYQVILSFDARNNP*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0024	shell	direct	high	194	0.995	GCA_015548685.1_00800
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	14979	15182	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	14980	15183	GCA_015548685_1_12_25	GCA_015548685_1_12_25	+	35616	.	.	hypothetical protein	MIDYEEMRQSIHYSDNLKIEEITRLNELIKLNEQHYEELKKSSILSTKIAIATLLVSALSLIAALVK*	.	hypothetical_protein	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0025	shell	direct	high	203	0.995	GCA_015548685.1_00801
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	15354	15569	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	15355	15570	GCA_015548685_1_12_26	GCA_015548685_1_12_26	-	35616	.	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain [Transcription]. 	MAISLKAARVNAGLTIVVLAKKMNTTPKTISNWENGKTAIPMHKFTEFCNICEMPQDNVIVPSVNDGVYEA*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0026	cloud	direct	high	215	0.995	GCA_015548685.1_00802
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	15731	16357	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	15732	16358	GCA_015548685_1_12_27	GCA_015548685_1_12_27	+	35616	.	PDB:2FJR_A	Repressor-protein-CI	MNNKEIFSKNLYKQLELHDITRAELARKLGYPETTVSNWANAVSYPRIDKIQEMADFFGIMKSDLTENKSTEERPLPSNLIPITKVNRIPVVGTIAAGKPITATENIDSYIVLNDEYKADFALRIKGDSMIDAGINDGDLALIIKDRPIDNGDIYAVLIDGDATLKKVYKNDDYLTLQPCNSKYQPIMVKEEDEPYIVGKLSGIVRKY*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0027	cloud	direct	high	626	0.998	GCA_015548685.1_00803
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	16559	17647	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	16560	17648	GCA_015548685_1_12_28	GCA_015548685_1_12_28	+	35616	.	COG2247	Putative cell wall-binding domain  [Cell wall/membrane/envelope biogenesis]. 	MVKGLRKSLILSCVLALFLPSVASADMNVSRIAGANRYETALKVQQKYFTKASGNLAVLASGTDFRTALYGSYMANALKVPFYAIPNTGMSRVMLDELKRTNVKNAYIMGNDKILNNSINNSLKSIDIKYKRFHDQVKIQDGYNYFSDRLSSMVDWTIFSTFNEGYARGDISCNIIVNDTKFPDLLSSVPFTSTLAREQKMGLVGYNSSKSEYLGSDGYGFIIGGYDSVPESIKTGSIFDNEGLGLYYHSSVDPDGIFFESYTGRIAGQNRYKTAIEIAKAYKPVLKRSIDTVVLVDGTNYPDALASGTVATMNNGVIILTEPGKLNEDTKAFIQENNIQNVIIVGGEKSVSKNVENELRGL*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0028	cloud	direct	high	1088	0.999	GCA_015548685.1_00805
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	17810	18805	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	17811	18806	GCA_015548685_1_12_29	GCA_015548685_1_12_29	+	35616	.	pfam18740	EC042_2821-lke REase. REase Fold Fused to HEPN (EC042_2821) and an N-terminal wHTH in some.	MDDNTKLIDTLVKKSIEAFLLGLEIYNKPTIKYRIEGFSFFMINAWELMLKAELIKRGQDIYFKDDSERTISVSSTIAKIYSDKNTKIRLNLEKIVDLRNISTHFITEDYEIKYVALFQACVLNFVNEIKRFHSVSMEDYISQNFLTISANYEPLTNEQIRLKYSPEIAEKLIKKGNEIDILSKEYDSDKFSIGIKQKLYITKKKADSDFTVSISDGSDNKVSIIKELKDPSNTHKYTHSNVVTVISNRLSKHKIKIDYEKGFNTYVLKLFIDFYNIKQNEEYCYIHIIGKNSHYTYSDKLVDFIFSEIKKNPNKFFESLKNIQKKITPGT*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0029	cloud	direct	high	995	0.999	GCA_015548685.1_00806
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	19013	20089	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	19014	20090	GCA_015548685_1_12_30	GCA_015548685_1_12_30	+	35616	.	PDB:1Z19_B	Integrase	MKGDLTMWVTKSKSGKFEFSEYYIDPITNKRRRVIVTFDKNNSHTSKLAQVELSKKIRDKTNNQSNGVGFFSVCETYLSEKKDETKSSTYKTYVSNINTIKEAVQDIELDKITVLYIDQVSKPLGRWTQIALKSLLIWAFKKDYLQKDIGRKMTIKRVYDKKDKLYYEKEEIKEILEILDNGQTYIDKLLRLLIEFLVLTGVRIGEALALTEDDIRSNIISINKRYYKGEIASPKSPAAIRDLAVNHRCMQIISEMKLLKRMFRIESKLLFPSGQRESNEYLEPGTLRDALKRKGLNAGLHIFRHTHASILAESGIQLDLIQRRLGHEKSDITKKIYIHVTERMKNKDNAVFSKLNIL*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0030	shell	direct	moderate	1058	0.982	GCA_015548685.1_00807
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	20168	20608	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	20169	20609	GCA_015548685_1_12_31	GCA_015548685_1_12_31	-	35616	.	COG1610	Uncharacterized conserved protein YqeY [Function unknown]. 	MSLKEKLQEDLKSSMKNKDTIRKSVITLVRAAIKQIEVDQRVELDDVAVMDIISKQLKQRNDSLAEFEKAGREDLIEETKSEIQVLKEYLPQQLSEEELEKIVIETIAEVGATSMKDMGKIMAIIKPKTAGRADGRKINELVKKNL*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0031	persistent	direct	high	440	0.998	GCA_015548685.1_00808
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	20632	20865	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	20633	20866	GCA_015548685_1_12_32	GCA_015548685_1_12_32	-	35616	.	COG0828	Ribosomal protein S21 [Translation, ribosomal structure and biogenesis]. 	MVQVYMTCKSLNCREVKQMSEVRVRENESLDSALRRFKRQCAMSGIMSEVRKREHYDKPSVKRKKKAEAARRKNAKR*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0032	persistent	direct	moderate	180	0.769	GCA_015548685.1_00809
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	20934	21287	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	20935	21288	GCA_015548685_1_12_33	GCA_015548685_1_12_33	-	35616	.	cd01276	Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	MINMDCIFCKLANGEIPTNMVYEDDRVAAFRDMAPVTPQHILVVPKAHYASLEDIPMDEMDIIADIHRAIRKIADQEGFAKDGYRIINNCGKDGGQEVPHIHYHLLAGKPLTRLVTD*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0033	persistent	direct	moderate	345	0.975	GCA_015548685.1_00810
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	21311	21631	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	21312	21632	GCA_015548685_1_12_34	GCA_015548685_1_12_34	-	35616	.	PRK01119	putative heavy metal-binding protein. 	MIVTTTGNIEGREIDQYKGIVFGEVISGVNFLLDIGAGLRNIFGGRSQGYEGKLKEAREEAIAEMEQRAASIGAHAVIGMKMDYEILGADNGMLMVTCSGTAVTLR*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0034	persistent	direct	high	320	0.997	GCA_015548685.1_00811
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	21808	22986	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	21809	22987	GCA_015548685_1_12_35	GCA_015548685_1_12_35	-	35616	.	PDB:5U31_A	endonuclease	MIKSIKVRLNLNNKQRTKLFQYAGCARFAYNWAIAREQDNYNQGNKFLSDSELRKEFTQLKKLQEYKWLNEVSNNVTKQAIKDACNTYKRFFKGQCKYPKFKSKKHSTPSFYQDNIKIQFTDTHVKVEKFSMSKKQNKQKLNWIKLCEKGRIPTDCKYVNPRFTYDGLYWYVSVGIEVEDATTIPLNDGIGIDLGIKDLAVCSDKNTYKNINKTQRVKKLEKRKRRLQRCISRRYEKNKKGVSYCKTSNIIKREKELLKVAKRLTNIRQNHIHQATSEIVKRKPSFICMEDLNVSGMMKNKYLSKAVWQQGLYEFRRQIKYKSELNNIPVIIADRLFPSSKLCSCCGNIKKDLKLSDRIYKCQCGNIIDRDFQASLNLKIYGENVLKQQSVS*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0035	persistent	direct	high	1178	0.999	GCA_015548685.1_00813
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	23071	24399	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	23072	24400	GCA_015548685_1_12_36	GCA_015548685_1_12_36	-	35616	.	COG0621	tRNA A37 methylthiotransferase MiaB [Translation, ribosomal structure and biogenesis]. 	MKKVAFYTLGCKVNQYETEAMLEMFEKKGYTNVGSEEYADVYVINTCTVTHMSDRKSRQYIRRVKKKNPKSIIAVVGCYSQVSPEEILEIEDVNLVMGTNDRRTIVDRIEELDSNSKLSTVDDIMKVREFESIEISQNNGKTRAFIKIQDGCDRYCTYCIIPYARGRIRSRNIDEIREEIITLANNGYKEVVLTGIHVASYGKDLKEDIGILDVIKAVNDIDGIERIRLSSVEPVLFTDEFIDEICKIDKLVPHFHLSLQSGTDSTLKRMNRRYTAAEYKRTVDTLRDRIKDVMLTTDVIVGFPGETNEDFSETLRFLKEIKLMHMHVFKYSPRKGTPAASMKDQVDPQAKQFRSDALLNLSKKNFKENTEKYIGRPLNVLFEEVDKEGYYEGLSDNYIRIKVKSDKDIRGQILEAKIVDIRDDYCIGEYYNRRYVTVKNKL*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0036	persistent	direct	high	1328	0.999	GCA_015548685.1_00814
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	24402	25178	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	24403	25179	GCA_015548685_1_12_37	GCA_015548685_1_12_37	-	35616	.	COG1385	16S rRNA U1498 N3-methylase RsmE [Translation, ribosomal structure and biogenesis]. 	MDRFFVDRENIDTQARNLVILGDDVKHISKVLRYSVGDELEVCDGQNKEYICRIDSMDKTEIGLSIIEEKDVDRESPIRIKLYQGLPKSTKMEIILQKLTECGVAEIILVNTARSVVNIDDKKSEKKLDRWQRIVYEAAKQSKRGIIPDLKGIYSFKEALRDMEVNDINIMPYEEEGSLGIKDLLRSEGIQQIIKENKSATIGIFIGPEGGFTEDENAKVKEAGGHSVKMGPRIFRTETASIVATSICLYELGDIGGM*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0037	persistent	direct	high	776	0.999	GCA_015548685.1_00815
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	25220	26164	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	25221	26165	GCA_015548685_1_12_38	GCA_015548685_1_12_38	-	35616	.	PDB:3G5L_A	Putative-S-adenosylmethionine-dependent-methyltransferase	MSDIWIEVTISTTTEAVEAITNILFENGAQGAMIDDPKDFYQQKAHDYDWDYAERELFREDEDVVYIKTYISDEKNVLKFIEDTRLRIQELGDCGLDVGEGTVTTGQVKEEDWANNWKKYYKPTLIGDRIVIKPEWEDYEVKNQEIVVELNPGMAFGTGNHETTSMCIENLEKYVKEDSVVFDIGCGSGILGICAAKLGAKEVIGIDIDEVAVKVAKENIDKNHVGSNMTAIKGNLADDIDPSKKADVVVANIMADIVMFLTKDVRSFLKDSGKFISSGIILDKVDEVVACLEENGFKDIQVNKKGEWSCIIAS*	common_virus_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0038	persistent	direct	high	944	0.999	GCA_015548685.1_00816
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	26175	27002	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	26176	27003	GCA_015548685_1_12_39	GCA_015548685_1_12_39	-	35616	.	cd09087	Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases. This subfamily includes human Ape1 (also known as Apex, Hap1, or Ref-1) and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Ape1 and Ape2 in humans. Ape1 is found in this subfamily, it exhibits strong AP-endonuclease activity but shows weak 3'-5' exonuclease and 3'-phosphodiesterase activities. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes exonuclease III (ExoIII) and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	MRLISWNIDSLNAALTSDSARALLSREVLKTIIDLDPDIIGLQETKLSVKGLTKKHIEIIEEMLPDYEYVYRSSVEPARKGYAGTMFLYKKGMNVKVSYPEIGAPTTMDFEGRIITLELDDCYVTQVYTPNAGDGLRRLEERQVWDCKYMEYLKTLDEDKPVLACGDYNVAHNEIDLANPASNHMSPGFTDEERAGFTNLLGAGFVDTFRHKNGMVEGAYSWWAQRVKTSKINNTGWRIDYWLVSERVADRVESSIMVDSGPRQDHTPILMDINL*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0039	persistent	direct	high	827	0.999	GCA_015548685.1_00817
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	27247	28404	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	27248	28405	GCA_015548685_1_12_40	GCA_015548685_1_12_40	+	35616	.	COG3274	Surface polysaccharide O-acyltransferase, integral membrane enzyme  [Cell wall/membrane/envelope biogenesis]. 	MHNISTDSQKSTQSILRKQDKKYSKNKILYLEFLRGFAIFFVIFNHTGTNGFNLFSTYQPASLQFWISLGVAIFCKFSVPVFFAISGALALGKDPEPLGRLWRKKILKFSLILIIISLIYYLELIYKANGNKLILEKGWINDFILKLYSGDVRTHLWYMYAFIAYLIGLPFLQSLVKHLEDKHYYYMVAICLLMNALVPITQFFVNNEAFRLSSDFSIGWICTNVVIYPCLGYYIHKKLEIKHRLLTPIILWIVNIGCISIASYVTYLRAMDTKTFDIEAYHYSFLVINMICVYITGKLLLENRKIPRLLSKYIRSLGSCTFGIYLLHMIVKDQEIFTDFLNYMISLGLDKLMAVLVYVYVLMIVSWIITFILSKIPLLKKLVGF*	mmseqs_cdd	nonviral_gene	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0040	persistent	direct	high	1157	0.999	GCA_015548685.1_00818
GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote	cenote	CDS	28503	29657	GCA_015548685.1	JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685.1_JADMXM010000020.1	GCA_015548685.1|JADMXM010000020.1	GCA_015548685_1_12	GCA_015548685_1_12@C0	28504	29658	GCA_015548685_1_12_41	GCA_015548685_1_12_41	-	35616	.	PDB:1GH6_A	Large-T-antigen	MLGVSKTADEKEIKKAYRKLAMKYHPDKNPGDKEAEEKFKEINEAYEVLSDADKRKIYDQYGADAVNGQGGFGGAGGFGGFSGGAGGFEDIFDMFGDVFGGSGGFGGFGGGYTRRGPVRGADIRQNVTIDFMEAAFGKKISVKINRNEECDECHGSGCKPGTSKKTCSTCGGSGTIRDIKQTMFGNIATQRECPDCHGTGEKIETPCSKCKGKGYTRKTKTIEVDIPAGIDDGQIIRVSGQGEYGEKGAPRGDLLVVINVRPHDVFIRDGYDVYITIPVSIVQATLGDDIQVPTVDGDVKYTVPAGTQPGTVFRLKSKGIQHVNSSRRGDQYVKVDVQIPKKVTDKQADLLRQFAGDSKDGVAINNPKGNKKTFGQKVEDFFTK*	rep_hall_hmm	common_virus	C0	29658	0	29658	GCA_015548685.1|JADMXM010000020.1@region_1_29658@tool_cenote_CDS_0041	persistent	direct	high	1154	0.999	GCA_015548685.1_00819
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	152	469	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	153	470	GCA_015548685_1_39_1	GCA_015548685_1_39_1	+	112456	.	.	hypothetical protein	MNVYLKNDVGMMKECKTVKNWLCFFFGGFVPLIEGDIKTAGIYFGVIILGFITLGVGDFLIMIGMSIFLLLKYNEMRIKNYLEKGYKPVDENVREYLVKQGILYE*	.	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0001	cloud	direct	high	317	0.997	GCA_015548685.1_01434
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	578	1207	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	579	1208	GCA_015548685_1_39_2	GCA_015548685_1_39_2	+	112456	.	PDB:6B0X_d	Major-Capsid-Protein	MRNDLKGLLKMNLQLLAEDTGAGAGTEPTPPEDGKEGKTYTDEELQKLIQSESDKRVTQAMKTAEQKWQKEYDKKLEDEKSEAEKLAKMSAEERAKAEFEKEKKKFDGERAKFNRDRLELETAKELGKQGLDVEFSSFLMGENAESTNENIKLFNEKFDSAVENAATERLKGKTPKTTDNNTTISVDSLNGMPIDEINANWDSIKGMKL*	hallmark_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0002	cloud	direct	high	629	0.998	GCA_015548685.1_01435
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	1226	1651	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	1227	1652	GCA_015548685_1_39_3	GCA_015548685_1_39_3	+	112456	.	PDB:5UU5_D	Major-Capsid-Protein	MSIKNFIPTLWSARLLANLDKKLVYANVVIHDYEGEIKNLGDKVKINQIGPITIKDYLTGDGAAKKLADPEEITSTQQELVIDQAISYAGQITKIEPYRPEKTFADAVKGLFVYGTKVIEPKALGCIKKIMPVWISWAEQC*	hallmark_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0003	cloud	direct	high	425	0.998	GCA_015548685.1_01436
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	1729	1872	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	1730	1873	GCA_015548685_1_39_4	GCA_015548685_1_39_4	+	112456	.	4CU2_A	ENDOLYSIN	MKNIEKKYRSIIHVGGSGAPQGVKVLAGANRYDTYDLVEEFIKNYNR*	hhsuite_tools	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	2156	3439	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	2157	3440	GCA_015548685_1_39_5	GCA_015548685_1_39_5	+	112456	.	COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]. 	MKAELIKKEGNSVSFEMAIDAKEFDAAVEKAYKKTRSRYKIDGFRKGKAPRRIIEMNYGKGIFFNDALDILLPEIYPVAVDELGLKVVSQPELDIKEANEDGSLVLVATADVRPEVEVKNYKGVEIEKVSAEVEEERIDAELNSMLQSHARVVTVDAPVENGNTAVIDFKGLLNGEAFEGGTAEAYSLEIGSGTFIPGFEEQIIGKKAGEEFEVNVTFPEEYPAEELAGKPVVFEVKLHEVKVKELPELNDEFAQDTTEFESLAELKADVKAKLEKDAEEEAKRQMRDAAVAKVAEGVEVEIPNSMVEAQMDRMLNDLNMQLSYQGWSIEQFAELSGQSMEEIREARREDALNIVKSTLVVEEIAELENVEVSQEDLDKDLEKFAAMYQIDIEKVKKSLQPEDIENISNRIRSEKTVDLILDAAVVK*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0005	persistent	direct	high	1283	0.999	GCA_015548685.1_01437
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	3569	4222	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	3570	4223	GCA_015548685_1_39_6	GCA_015548685_1_39_6	+	112456	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MLVLKTTSYYVVFIRKKRFGGDNMALVPYVVEQDGRGERSYDIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDIHLYINSPGGSVTAGMAIYDTMQYIKADVSTICVGMAASMGAFLLAAGAKGKRYALPNSTVMIHQPLGGTRGQATDIEIHTKYLLSIKEKLNKILAERTGQDLETVKANTERDNFMTADEARDFGLIDEVIAGRV*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0006	persistent	direct	moderate	584	0.893	GCA_015548685.1_01438
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	4247	5515	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	4248	5516	GCA_015548685_1_39_7	GCA_015548685_1_39_7	+	112456	.	COG1219	ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones]. 	MPNKDNEKQFRCSFCGKTQDQVKRIIAGPGVYICDECVGLCSEIIEEEMLANAAQENGEMNLPKPKEMMEILNDYVIGQSGAKKALSVAVYNHYKRIYSENTTGDVEVQKSNILLLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENIILKLVQAADFDVERAQKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVANVPPSGGRKHPHQEFLKVDTTNILFILGGAFDGIEKIVQKRGKEKSLGFGAKIESKNDMDIGKLYSQVVPDDLLKFGLIPEFIGRVPVLATLDLLDEESLVKILTEPKNALTKQYAKLFEYDDAKLEFEEDALRAVAQKAIERKTGARGLRSIIEHALMDVMYEVPSLENVEKVIIKRDCIEENAKPEIVFKDVREVINDSPIS*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0007	persistent	direct	high	1268	0.999	GCA_015548685.1_01439
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	5759	8131	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	5760	8132	GCA_015548685_1_39_8	GCA_015548685_1_39_8	+	112456	.	PDB:1SXJ_A	Clamp-Loader	MENNEVKDNNVIIYKDTIEMPMIPLRGISISPCILQSFDIGRLNSIESFELSMINGEKIFLASQFDSLVEEPDIDDIYTIGTICSVKQVIRTSETSIRVLVEGLGRAKLEKMWIDENNAWMGQITPIEFDEDQFTDEEKNTLEAYSRRLMKGFENYISIAVEMTSDASMDLADAEGYSMLIDIIASSLFLKFSDRQKILVTLDVEERMKMIYDYLQRELEVIKIDKKINQDVRKQMNKIQKDYYLREQMKAIQKELGEIPDEGEDSGYRAKLNELKIDAETFEKIEKEIEKFERTPVGSPDYNVSKNYLDTIFSLPWNKESRNRFDIKKSEKILNEDHYGLDDVKDRILEYLAVRKLSKNLKGPIICLAGPPGVGKTSIAKSVARSLGRHFVRISLGGVRDEAEIRGHRRTYIGAIPGRIINAMKEAKSKNPVILLDEIDKMASDFKGDPTSAMLEVLDPEQNKYFVDHYLELPFDLSKVLFITTANDLRNIPRPLYDRMEVIDIEGYLEEEKLEIVKNFVLKKQLKENGLSKDFIKMDDEVIKYVINRYTREAGVRQLERTIGKLCRKVVKEMVENPKLKPVTMTKELVVKYLGKEKYRQEPLDMNPQVGLVNGLAWTAVGGVTLEIEVSVLPGKGQIVLTGMMGDVMKESARTGISYIRSIADKLDIEPEFYKNKDIHIHIPEGATPKDGPSAGITMTLATISALTNRPVPGNIAMTGEITLRGRVLAVGGVREKVLAAYRMGIRKIILPKECEADIEKIPETVRNDIEFVLVDKMEEVLEVALLERM*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0008	persistent	direct	high	2372	1.0	GCA_015548685.1_01440
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	8141	8920	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	8142	8921	GCA_015548685_1_39_9	GCA_015548685_1_39_9	+	112456	.	COG0218	GTP-binding protein EngB required for normal cell division [Cell cycle control, cell division, chromosome partitioning]. 	MEENTKVSETKPKKNRRRNQNKQEKQVKKPVKKKVAPKKPTTIDEKVRQEEKMKIRTAEITMSAVNRSQYPGEGIPEIALAGRSNVGKSSVINGLLSRKNFARTSSTPGKTRTINFYLINEEFYFVDLPGYGYAKVAKTEKEKWGAIMEMYLSDRRELCAIFLLVDCRHEPTADDKMMYEWIKHFGYNCVVVATKADKISRGQYQKHTSIIRKKLEMAKEDKIILTSSSSNVGMKVLWDEIVDQYAQHGYIVTYEKTVD*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0009	persistent	direct	high	779	0.999	GCA_015548685.1_01441
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	9062	9607	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	9063	9608	GCA_015548685_1_39_10	GCA_015548685_1_39_10	-	112456	.	COG0634	Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]. 	MNIEDRKWEMMFDSYILSKRIKELGDKINQDYKGKNLLVISLLKGSFIFCADLVRAIDSYNLTVNFMTTSSYGRSTESSGNVVVKSDISIEDISNFDVLIVDDITDTAHTMDFVVKHIAKKNPKSIRTCVLLDKPSRREVDFTADYIGFEIEDKFVVGYGFDFEDRYRNVPYIFCVTDELR*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0010	persistent	direct	high	545	0.998	GCA_015548685.1_01442
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	9834	10052	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	9835	10053	GCA_015548685_1_39_11	GCA_015548685_1_39_11	+	112456	.	.	hypothetical protein	MNNQKKKLYSDKWSKSNTRDIFNEKQKIAIEKYGDVFEDDMFFALELSLNTDLDSQLSEEFVDRMKKRTKLS*	.	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0011	persistent	direct	high	218	0.995	GCA_015548685.1_01443
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	10142	11026	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	10143	11027	GCA_015548685_1_39_12	GCA_015548685_1_39_12	-	112456	.	COG0329	Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism, Cell wall/membrane/envelope biogenesis]. 	MIFKGCAIRLVTPFSDTNEVDFDKLEKLLDKQLGLGAAAIIVGGNNGEFLTMSDEEISSLIDFVVKKVDKKIPVLAQTGFNDTRRSIILGIKANQSGVDALIFEPPYYNVGNEKGILSHYRSLAMTCDLPCYIFSDSEHSGSNLPIGLLAKLAAIDNIVGIIETSNDIEHIARMISSLPSNFDIISANDSIALAALSLGIKSLASSLINIVPNQVLDMYKHFESGKIEYAREIQINNFALIDALKLEVNPIPVKTAMNMMGIEVGDFRLPIGTMHPDRAAQLATILMDNNIKSY*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0012	persistent	direct	high	884	0.999	GCA_015548685.1_01444
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	11728	11889	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	11729	11890	GCA_015548685_1_39_13	GCA_015548685_1_39_13	-	112456	.	.	hypothetical protein	MLNNIYGFNSKRTKCIYLYNYQSSSFDRTEKRKYYFPTVLGIDAPEGIKNSIS*	.	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0013	.	unmatched_CDS	none	0	0	.
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	12200	12418	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	12201	12419	GCA_015548685_1_39_14	GCA_015548685_1_39_14	+	112456	.	PFAM:PF13744.5	transcriptional-repressor	MEKFQVCNSVSVIRKERGYTQLKLAKLADFSQQYISNIERGVLIPSIAKAIKLAEVLGVCHGELFFKCEIKD*	phrogs_hmm	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0014	persistent	direct	high	218	0.995	GCA_015548685.1_01445
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	12897	13454	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	12898	13455	GCA_015548685_1_39_15	GCA_015548685_1_39_15	+	112456	.	.	hypothetical protein	MKNREEKLSYLRKKDFISIFITTVVSAFIFLFINEYFVGTTEAIIFSYIGVIGGIITVIVSYFESKSNDPFVTGKTLTFGVINSFIGAGVVILLTSFRFGLIPSLIVIDIIIIMSRELGRKSREKMLDKFINKTGTIIKNNGNGKYVMDLNSKRVTVYSKDNLAIGGMVKVSELKGTCIYVEVFA*	.	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0015	persistent	direct	high	557	0.998	GCA_015548685.1_01446
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	13816	15033	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	13817	15034	GCA_015548685_1_39_16	GCA_015548685_1_39_16	-	112456	.	PDB:1Z19_B	Integrase	MSEKRRDNKGRILKTGESQRKDGRYLYKYIDSFGEPQFVYSWKLVATDRVPAGKRDCISLREKIAELQKDIHDGIDVVGKKMTLCQLYAKQNAQRPKVRKNTETGRKYLMDILKKDKLGVRSIDSIKPSDAKEWAIRMSENGYAYQTINNYKRSLKASFYIAIQDDCVRKNPFDFQLKAVLDDDTVPKTVLTEEQEEKLLAFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFENRLVNIDHQLLRDTEIGYYIETPKTKSGERQVPMVEEAYQAFKRVLANRKNDKRVEIDGYSDFLFLNRKNYPKVASDYNGMMKGLVKKYNKYNEDKLPHITPHSLRHTFCTNYANAGMNPKALQYIMGHANIAMTLNYYAHATFDSAMAEMKRLNKEKQQERLVA*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0016	shell	direct	high	1217	0.999	GCA_015548685.1_01447
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	15115	15318	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	15116	15319	GCA_015548685_1_39_17	GCA_015548685_1_39_17	-	112456	.	pfam09035	Excisionase from transposon Tn916. The phage-encoded excisionase protein Tn916-Xis adopts a winged-helix structure that consists of a three-stranded anti-parallel beta-sheet that packs against a helix-turn-helix (HTH) motif and a third C-terminal alpha-helix. It is encoded for by Tn916, which also codes for the integrase Tn916-Int. The protein interacts with DNA by the insertion of helix alpha-2 into the major groove and the contact of the hairpin that connects strands beta-2 and beta-3 with the adjacent phosphodiester backbone and/or minor groove. Tn916-Xis stimulates phage excision and inhibits viral integration by stabilizing distorted DNA structures.	MKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANWLIMNGNRIQIKRKQFEKIIDTLDAI*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0017	shell	direct	high	203	0.995	GCA_015548685.1_01448
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	15779	16009	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	15780	16010	GCA_015548685_1_39_18	GCA_015548685_1_39_18	-	112456	.	pfam12645	Helix-turn-helix domain. This domain appears to be a helix-turn-helix domain suggesting that this might be a transcriptional regulatory protein. Some members of this family are annotated as conjugative transposon domains.	MKTQYPMIPFPLIVKATDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRGRMETRLITKILSFEIK*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0018	shell	direct	high	230	0.996	GCA_015548685.1_01450
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	16006	16428	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	16007	16429	GCA_015548685_1_39_19	GCA_015548685_1_39_19	-	112456	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MKPSSFQTTIENQFDYICKRAMEDERKNYMLYLSRIAKREVSFSDVGDYLVSQFATTDNYSTDFQIFTLNGLSVGVENDLLSEALRELPDKKREILLLFYFMDMSDSEIADLLKLNRSTVYRHRTSGLALIKKFMEEFEE*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0019	shell	direct	high	422	0.998	GCA_015548685.1_01451
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	16933	17286	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	16934	17287	GCA_015548685_1_39_20	GCA_015548685_1_39_20	+	112456	.	pfam18430	Putative DNA-binding domain. This is a putative DNA-binding protein dimerization domain found bacterial proteins such as CD3330, (a transposon-related DNA-binding protein from Clostridium difficile). Crystal structure analysis suggests that CD3330 N-terminus is involved in dimer formation and also in crystal packing but the C-terminus is open to solvent.	MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0020	shell	direct	high	353	0.997	GCA_015548685.1_01452
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	17632	19551	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	17633	19552	GCA_015548685_1_39_21	GCA_015548685_1_39_21	-	112456	.	cd04168	Tet(M)-like family includes Tet(M), Tet(O), Tet(W), and OtrA, containing tetracycline resistant proteins. Tet(M), Tet(O), Tet(W), and OtrA are tetracycline resistance genes found in Gram-positive and Gram-negative bacteria. Tetracyclines inhibit protein synthesis by preventing aminoacyl-tRNA from binding to the ribosomal acceptor site. This subfamily contains tetracycline resistance proteins that function through ribosomal protection and are typically found on mobile genetic elements, such as transposons or plasmids, and are often conjugative. Ribosomal protection proteins are homologous to the elongation factors EF-Tu and EF-G. EF-G and Tet(M) compete for binding on the ribosomes. Tet(M) has a higher affinity than EF-G, suggesting these two proteins may have overlapping binding sites and that Tet(M) must be released before EF-G can bind. Tet(M) and Tet(O) have been shown to have ribosome-dependent GTPase activity. These proteins are part of the GTP translation factor family, which includes EF-G, EF-Tu, EF2, LepA, and SelB.	MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGITSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPVYHGSAKNNIGIDNLIEVITNKFYSSTHRGQSELCGKVFKIEYSEKRQRLAYIRLYSGVLHLRDSVRISEKEKIKITEMYTSINGELCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIELKEPTVIYMERPLKNAEYTIHIEVPPNPFWASIGLSVSPLPLGSGMQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYNDAPKYCANIVDTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNKIT*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0021	shell	direct	high	1919	0.999	GCA_015548685.1_01453
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	19928	20860	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	19929	20861	GCA_015548685_1_39_22	GCA_015548685_1_39_22	-	112456	.	pfam12642	Conjugative transposon protein TcpC. This family of proteins are annotated as conjugative transposon protein TcpC. The transfer clostridial plasmid (tcp) locus is part of some conjugative antibiotic resistance and virulence plasmids. TcpC was one of five genes whose products had low-level sequence identity to Tn916 proteins, having similarity to ORF13 homologs from Tn916, Tn5397, and CW459tet. This family of proteins is found in bacteria. Proteins in this family are typically between 302 and 351 amino acids in length.	MRKEDLMMKFRKNQNKEKQIPKEKKPRVYKVNPHKKVVIALWVLLGLSFSFAIFKHFTAIDTHTIHETTIIEKEYVDTHHVENFVENFAKVYYSWEQSDKSIDNRMESLKGYLTDELQALNVDTVRKDIPVSSSVRGFQIWTVEPTGDNEFNVTYSVDQLITEGENTKTVHSAYIVSVYVDGSGNMVLVKNPTITNIPKKSSYKPKAIESEGTVDSITTNEINEFLTTFFKLYPTATASELSYYVNDGILKPIGKEYIFQELVNPIHNRKDNQVTVSLTVEYIDQQTKATQVSQFDLVLEKNGSNWKIVK*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0022	shell	direct	high	932	0.999	GCA_015548685.1_01455
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	20857	21858	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	20858	21859	GCA_015548685_1_39_23	GCA_015548685_1_39_23	-	112456	.	PDB:3CT5_A	Morphogenesis-protein-1-hydrolase	MKLKTLVIGGSGLFLMVFSLLLFVAILFSDEQDSGISNIHYGGVNVSAEVLAHKPMVEKYAKEYGVEEYVNILLAIIQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGVKYFSELLASSERLSVDLESVIQSYNYGGGFLGYVANRGNKYTFELAQSFSKEYSGGEKVSYPNPIAIPINGGWRYNYGNMFYVQLVTQYLVTTEFDDDTVQAIMDEALKYEGWRYVYGGASPTTSFDCSGLTQWTYGKAGINLPRTAQQQYDVTQHIPLSEAQAGDLVFFHSTYNAGSYITHVGIYLGNNRMFHAGDPIGYADLTSPYWQQHLVGAGRIKQ*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0023	shell	direct	high	1001	0.999	GCA_015548685.1_01456
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	21855	24032	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	21856	24033	GCA_015548685_1_39_24	GCA_015548685_1_39_24	-	112456	.	.	hypothetical protein	MKPSIVNRIKSNWTLKRLGKVAMTVAFTLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPWNWSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLAGVSANGFSTEGFYVGFLLLLILVLGVYVAYTGLIKRETTKAIHAIMNFVLVFILSASFIAYAPDYIKKINDFSSDISNASLSLGTKIVMPHSDSQGKDSVDLIRDSLFSIQVQQPWLLLQYNSSDIESIGIDRVESLLSTSPDSNNGEDREKIVAEEIEDRSNTNLTITKTINRLGTVFFLFVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAITKLFNTILTRAGITLIITTAFSISTMLYTLSAGYPFFLIAFLQIVTFAGIYFKLGDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTTLGAGSAIVTGKKGQSGSGSSARTQADHSRPDGKEKSTLGKRIGQTIGTVADTKDRMVDTASGLKEQVKDLPTNARYAVYQGKSKVKENVRDLTSSISQTKADRASGRKEQQEQRRKTIAKRRSEMEQVKQKKQPASSVHERPTTRQEQYHDEQTSKQSNIQTSYKESQQAKQERPAVKSDFSSPKVERQGNTVQEKTVQKPATSTTTADRTSQRPITKERPSTVQRVPLQNTRSRPPIKTATIKKVGKKP*	.	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0024	shell	direct	high	2177	1.0	GCA_015548685.1_01457
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	24035	26482	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	24036	26483	GCA_015548685_1_39_25	GCA_015548685_1_39_25	-	112456	.	pfam12846	AAA-like domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	MAYPIKYIENNLVWNKDGECYAYYELVPYNYSFLSPEQKIQVHDSFRQLIAQNRDGKIHALQISTESSIRSAQERSKNEVTGKLKAVAYDKIDQQTDALISMIGENQVNYRFFIGFKLLLNDQEFSMKSLTVEAKNALSDFVYDVNHKLMGDFVSMSNDEILRFQKMEKLLENKISRRFKIRRLDKDDFGYLIEHLYGQTGTAYEEYEYHLSKKKLDNETLIKYYDLIKPTRCLVEEKQRYLKIQQEDETVYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANRKALSTVRNKKKELKDLDNHAWQSDNETSSNVAEALESVNELETNLDQSKESMYKLSYVVRVSANDLDELKRRCNEVKDFYDDLSVKLVRPFGDMLGLHEEFLPASKRYMNDYIQYVTSDFLAGLGFGATQMLGENEGIYVGYSLDTGRNVYLKPALASQGVKGSVTNALASAFVGSLGGGKSFANNLIVYYAVLYGAQAVIVDPKAERGRWKETLPEISHEINIVTLTSDEKNKGLLDPYVIMKNPKDSESLAIDILTFLTGISSRDGERFPILRKAIRAVTNSEVRGLMKVIEELRVENTPLSTSIADHIESFTDYDFAHLLFSNGYVEQSISLEKQLNIIQVADLVLPDKETSFEEYTTMELLSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVYFVTQNTDDLLDEKLKNNLGLKFAFRSTDLNEIKKTLAFFGVDPEDENNQKRLRDLENGQCLISDLYGRVGVIQFHPVFEELLHAFDTRPPVRKEV*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0025	shell	direct	high	2447	1.0	GCA_015548685.1_01458
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	26466	26972	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	26467	26973	GCA_015548685_1_39_26	GCA_015548685_1_39_26	-	112456	.	pfam12648	TcpE family. This family of proteins includes TcpE a conjugative transposon membrane protein.This family of proteins is found in bacteria. Proteins in this family are typically between 122 and 168 amino acids in length.	MGFLKSSIKSVGTLLLADFLFYGVAQSATPIFYERIDYMKKIRSYTSIWSVEKVLYSINDFRLPFPITFTQMTWFVVSLFAVMILGNLPPLSMIEGAFLKYFGIPVAFTWFMSTKTFDGKKPYGFLKSVIAYALRPKLTYAGKKVTLGRNQPQEAITAVRSEFYGISN*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0026	shell	ambiguous	low	25	0.049	GCA_015548685.1_01459
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	26947	27444	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	26948	27445	GCA_015548685_1_39_27	GCA_015548685_1_39_27	-	112456	.	pfam07275	Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	MDDMQVYIANLGKYNEGELVGAWFTFPIDFEEVKEKIGLNDEYEEYAIHDYELPFTVDEYTSIGELNRLWEMVSELPEELQSELSALLTHFSSIEELSEHQEDIIIHSDCDDMYDVARYYIEETGALGEVPASLQNYIDYQAYGRDLDLSGTFISTNHGIFEIVY*	mmseqs_cdd	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0027	shell	direct	high	497	0.998	GCA_015548685.1_01459
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	27561	27782	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	27562	27783	GCA_015548685_1_39_28	GCA_015548685_1_39_28	-	112456	.	.	hypothetical protein	MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLIIAIIAVGLVFNAAGVKDILLELFNRIIGA*	.	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0028	shell	direct	high	221	0.995	GCA_015548685.1_01460
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	27825	28973	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	27826	28974	GCA_015548685_1_39_29	GCA_015548685_1_39_29	-	112456	.	PFAM:PF02486.18	Replication-initiation-factor	MAYGLSQNRLAVATGITRQYLSDIETGKVKPSEDLQQSLWEALERFNPDAPLEMLFDYVRIRFPTTDVQQVVENILQLKLSYFLHEDYGFYSYSEHYALGDIFVLCSHELDKGVLVELKGRGYRQFESYLLAQQRSWYEFFMDVLVAGGVMKRLDLAINDKTGILNIPVLTEKCQQEECISVFRSFKSYRSGELVRKEEKECMGNTLYIGSLQSEVYFCIYEKDYEQYKKNDIPIEDAEVKNRFEIRLKNERAYYAVRDLLVYDNPEHTAFKIINRYIRFVDKDDSKPRSDWKLNEEWAWFIGNNRERLKLTTKPEPYSFQRTLNWLSHQVAPTLKVAIKLDEINQTQVVKDILDHAKLTDRHKQILKQQSVKEQDVITTKK*	rep_hall_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0029	shell	direct	high	1148	0.999	GCA_015548685.1_01461
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	29208	30593	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	29209	30594	GCA_015548685_1_39_30	GCA_015548685_1_39_30	-	112456	.	PDB:2IUS_D	DNA-TRANSLOCASE-FTSK	MKQRGKRIRPSGKDLVFHFTIASLLPVFLLVVGLFHVKTIQQINWQDFNLSQADKIDIPYLIISFSVAILICLLVAFVFKRVRYDTVKQLYHRQKLAKMILENKWYESEQVKTEGFFKDSAGRTKEKITYFPKMYYRLKNGLIQIRVEITLGKYQDQLLHLEKKLESGLYCELTDKELKDSYVEYTLLYDTIASRISIDEVEAKDGKLRLMKNVWWEYDKLPHMLIAGGTGGGKTYFILTLIEALLHTDSKLYILDPKNADLADLGSVMANVYYRKEDLLSCIETFYEEMMKRSEEMKQMKNYKTGKNYAYLGLPAHFLIFDEYVAFMEMLGTKENTAVMNKLKQIVMLGRQAGFFLILACQRPDAKYLGDGIRDQFNFRVALGRMSEMGYGMMFGSDVQKDFFLKRIKGRGYVDVGTSVISEFYTPLVPKGYDFLEEIKKLSNSRQSTQATCEAEVAGVD*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0030	shell	direct	high	1385	0.999	GCA_015548685.1_01462
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	30622	31005	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	30623	31006	GCA_015548685_1_39_31	GCA_015548685_1_39_31	-	112456	.	pfam06125	Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	MRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQDK*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0031	shell	direct	high	383	0.997	GCA_015548685.1_01463
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	31024	31338	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	31025	31339	GCA_015548685_1_39_32	GCA_015548685_1_39_32	-	112456	.	pfam06125	Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	MELKFVIPNMEKTFGNLEFSGEDKVVQRRINGRLTVLSRSYNLYSDVQRADDIVVVLPAEAGEKHFGFEERVKLVNPRITAEGYKIGTRGFTNYLLHADDMIKE*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0032	shell	direct	high	314	0.997	GCA_015548685.1_01464
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	31664	32365	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	31665	32366	GCA_015548685_1_39_33	GCA_015548685_1_39_33	+	112456	.	PFAM:PF02456.14	ABC-transporter	MLFLLSKISKFTIVIIILSGIIQGFIPTVMLIISKYTLNEVQNLDSKAILFALVGIFVKIFSLVFGKLYGYYISKISLLFDNMISVMILEKSSELGMKDYDSKNTYDIITRAQMQGASSIITYIDSYINTFKEIITILSTMIIILVYNKLIFVVVLVLPIIDYYFSIKIVKEQYTIIKNRTIEDRKLWYIKYIATMGNTFKELEIFSLWNHLISSYKSISSKIISQDLKIHKK*	phrogs_hmm	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0033	cloud	direct	high	701	0.999	GCA_015548685.1_01465
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	32429	32707	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	32430	32708	GCA_015548685_1_39_34	GCA_015548685_1_39_34	+	112456	.	.	hypothetical protein	MIYQAIFERMLIGDITAYKTAIDTFMLGISSVFSELALVKKNSLDVNFLFSFLDLPKRRDLVDIKNKVSISTIDTIELKNVHFKYSEKMNIP*	.	hypothetical_protein	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0034	cloud	direct	high	278	0.996	GCA_015548685.1_01466
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	32803	33018	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	32804	33019	GCA_015548685_1_39_35	GCA_015548685_1_39_35	-	112456	.	PDB:3VQ6_A	RNAseH,-DNA-binding,-DNA-cleavage	MKIKNTDLPQRLKRLQKSTRIRINKRKLGKSISQIPKHIENRKEFGHWEIDTVIGKKTSDQDVLLTIIERK*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0035	.	unmatched_CDS	none	0	0	.
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	33024	33443	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	33025	33444	GCA_015548685_1_39_36	GCA_015548685_1_39_36	-	112456	.	PDB:3VQ6_A	RNAseH,-DNA-binding,-DNA-cleavage	MNQLNFNTEKRNFKHLSEYERGEIYAMVELGHSISSIARHLNRSRTTIYNELKGGRVEQIKNGHKVTLYYPDAGQTQYKKNRKNSKKKFKVLECIDFIKFVEKSFKERYWSLDECYGRAKSEKYSKIRYAQRHYTSMLN*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0036	shell	direct	high	419	0.998	GCA_015548685.1_01467
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	33725	34918	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	33726	34919	GCA_015548685_1_39_37	GCA_015548685_1_39_37	+	112456	.	TIGR00720	L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis]	MDTLKELYKIGSGPSSSHTMGPQRAAKRYSDKHPEAVSFRATLYGSLAATGAGHLTDYIIIKTIKPREVEIVWRADINPEFHPNGMMLEAIDQGGNAYDPWTVFSVGGGTLAEEGKRGQVEGKVYYEHNKLDDIIAYCKENDLNFVEYVLQREDDDFLEYMEAIADTMKSAIDKGIESRELIPGKLKLKRRASIFYKRYLATKDYTSLDYAYALAASEENASGGTIVTAPTCGAAGVIPGVFFSLMDHNGYTKQHIIEGLIVAGLIGNLIKTNASISGAEAGCQAEVGTACSMAAAGSAYLFGGNFEQIEYAAEIGLEHHLGMTCDPVYGYVQIPCIERNAMAAERAIAAAKYALNTDGSHTISFDQVTVTMMETGVDLMDKYRETAKGGLAKWFEC*	mmseqs_cdd	nonviral_gene	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0037	persistent	direct	high	1193	0.999	GCA_015548685.1_01468
GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote	cenote	CDS	35220	35984	GCA_015548685.1	JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685.1_JADMXM010000005.1	GCA_015548685.1|JADMXM010000005.1	GCA_015548685_1_39	GCA_015548685_1_39@C0	35221	35985	GCA_015548685_1_39_38	GCA_015548685_1_39_38	+	112456	.	PDB:3G5L_A	Putative-S-adenosylmethionine-dependent-methyltransferase	MDQYGNFAYIYDQLMDDVDYEAWVEHIEKLIAISGANVKNILELACGTGNITLPLARKEYDIAGLDISEEMLDVAREKSELENIPLVLLQQDMTQLDFDLYDLDCILCACDGINYITDLEDVKNLFGKVYELLKKEGIFIFDISSYYKLSSILGNNFMGEARDDISYMWTNYYDDMTQLLNMDLDFFVKVQAEDDDEDNLYERYKEVHLQRAHKEEELAAILEEAGFKDIRMFGDFSLEDVDKKSERVFFLAKK*	common_virus_hmm	common_virus	C0	35985	0	35985	GCA_015548685.1|JADMXM010000005.1@region_1_35985@tool_cenote_CDS_0038	persistent	direct	high	764	0.999	GCA_015548685.1_01469
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	76469	77833	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	1	1365	GCA_015548685_1_40_64	GCA_015548685_1_40_64	-	103684	.	.	hypothetical protein	MDKSSIKGGLILGLLILLSIGLAAGFHTMKLSSSRVETIQGDKGELEKMNLISTEMDLEDLNIRHDMDEKYIEGIKSNIKNIPAYILKDGRPEKITLKFDKNDNIKAIDKKSNRYSILNELTYDHTAYVVDPKNSHGIYLNYSIEGVGKKIRLNEKDLIGYTGNDRIEVKRLEKYKGKTYLVLSYSVKNTDKATMKKNDLIEKLVFAEIVGDGIQVLNRLDILSDSENANSMRVIAAFDKILIFSYRDYPSKDLKNEMISLDLASKKLAREDISSKKDSKGIYINPDIYDSYIKYDKNNGILYLISRENNQKPFHIRSYKMKEDKLIDVDDRTINLDDYLTQVQLPTKDDKMSQMGSINRVNIMMKGKKVIIIKYNNFNIYQWKGKGVEKTIKNEDGTEIPEDRDNLEFNNSSIYSSTQIYIYDVDKDKITYSGAIKGQLEIDARTIYMSEKEK*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0001	persistent	direct	high	1364	0.999	GCA_015548685.1_01601
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	77826	78713	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	1358	2245	GCA_015548685_1_40_65	GCA_015548685_1_40_65	-	103684	.	.	hypothetical protein	MNDILKLYYYGLKINKKKFMLIGGLICVWIILSISVSMFSVSSIGKVSFVGSFFKDFYQAKPLPMASMDRFKKIISSSILLRDTASFAMYSFIGFVTLLSVLMSFLLVTDDYKRKNSSYLIMANLPTKIYKVKISKILVGWSIYIFCIVGFSLAALLMDAIWKLYLGDMYMMSAWSLLGNDSFLLTSSYSAIIISLVVVLPSVMGIQALTSIFFVSNDRGKVLKKIICVVLLMINGIGVFVFVVSYMFNYNIFNNYSELSVVTWFAMAIYIVSLTLTYVDCRLSQKRTRGGVING*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0002	persistent	direct	high	887	0.999	GCA_015548685.1_01602
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	78726	79529	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	2258	3061	GCA_015548685_1_40_66	GCA_015548685_1_40_66	-	103684	.	.	hypothetical protein	MTKLLKLLKLEFKNNMMLFIGFNITSVIVLVLSCIISNLLYLRDIRRSYLLGDANTVYVYDSLQPSLTALVLVFSLVFVIIYTATSLTRKLSKSDGSVYSIMQLPVKIYNHIQATYISSLVFALFNSLLSMIILVVYSRYLRGEMIDIVRTVPLFQSRIPSVKEILNKFIDGNPFFTINPSMVALVALKWILLISVVIAIVLLVKSSKNIPIYITALIIFLSFYSANVIEFVGWGSGKIDTTYIVKLIVSTIGFIVANHILIRRIEY*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0003	persistent	direct	high	803	0.999	GCA_015548685.1_01603
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	79522	80241	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	3054	3773	GCA_015548685_1_40_67	GCA_015548685_1_40_67	-	103684	.	COG4555	ABC-type Na+ transport system, ATPase component NatA [Energy production and conversion, Inorganic ion transport and metabolism]. 	MIKVQNLTKKYKTNVKVSKSSTSYALDNVSLTIKEGKITAILGTNGSGKTTLLKSLMGFVRPTSGKVFIDDEKISHKSYEKMIFIPDCPTHFPGFSIKEMIDFYKDFYPTWNSEKEREMLDFFGLDINQNIDSLSKGNIAKVKLVLGFCLDMKYIIMDEPFNGIDIFKREEFVSVMARFMEEDQAIILSTHEIDEIEKIVDYVFILSDGKLVSEFDAEEMRSLEGKSIIEKIREVSLND*	mmseqs_cdd	nonviral_gene	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0004	persistent	direct	high	719	0.999	GCA_015548685.1_01604
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	80279	80707	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	3811	4239	GCA_015548685_1_40_68	GCA_015548685_1_40_68	-	103684	.	COG1725	DNA-binding transcriptional regulator YhcF, GntR family [Transcription]. 	MPIKGFVFNNNTPIYLQISKYYQAKVFIGEIEPGDVIPSRRELAGSFGVNLNTVQKAYAYMEEIGLICTEKNKQSTITLDLDLINRLKTEYLKEPLMDFIYSMKSVNIDKNTVLKLVGEYYDLVEEDVKADEEDDEYEDGDR*	mmseqs_cdd	nonviral_gene	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0005	persistent	direct	high	428	0.998	GCA_015548685.1_01605
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	80932	82011	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	4464	5543	GCA_015548685_1_40_69	GCA_015548685_1_40_69	-	103684	.	pfam11070	Protein of unknown function (DUF2871). This family of proteins has no known function.	MMSLMESIFDIGYLSLVIGLGVRILLERKEGAKNFGIMAILLGLGDAFHLIPRLVSHLSLGGFEKNIAALSWGEFVTSITMTIFYIMFYRYYVGIAGDKSKRKSMLIYGLAIVRIGLVLMPQNLWGSQGDYTFAIIRNIPFLIMGILIIGWTYKYRHIDGLKNASIFIFLSFLFYIPVVVGARFIPILGALMIPKTIMYVLIVMVGYRYFVDEFEQENIFKLAISFLIMGLISGVFYREFVKYYKWQGLTSLSFIHVHLLTLGFMMLVLVYMLVKILRIDIIKLKRPIKLYLSGLVLTIVCMLVKGIYEITSAGADLFPRAALSGISGLGHMIIGIGMVWLLISLIPEKNLQKTPENKI*	mmseqs_cdd	nonviral_gene	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0006	persistent	direct	high	1079	0.999	GCA_015548685.1_01606
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	82008	82571	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	5540	6103	GCA_015548685_1_40_70	GCA_015548685_1_40_70	-	103684	.	2QCO_A	CmeR	MPKETFYNLNEDKKTLIEKALIKEFESNPLCEATVKNIVEDLNISRGSFYQYFYSLEESYFYILDKFTGEVHSLFLNLLEKNKGNINKTLEDYGRELADEIFKGEYYYIYRNKFLYWNMSLDRDWKQYVASNSKACEGNYGESEQVHYLGALVHSLMQRLFLEEWSKEEFVDHYSLYVKWIIGGIGR*	hhsuite_tools	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0007	persistent	direct	high	563	0.998	GCA_015548685.1_01607
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	82730	83014	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	6262	6546	GCA_015548685_1_40_71	GCA_015548685_1_40_71	-	103684	.	.	hypothetical protein	MIKELMNLIKSYLDGDTVTIPEGYQNITREYNFYHFLEDYLFDNWEDIATDETYDIVDELPELCAETEPYTDTTDMDIRLRKYYDRLKEITSFI*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0008	shell	direct	high	284	0.996	GCA_015548685.1_01608
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	83244	83480	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	6776	7012	GCA_015548685_1_40_72	GCA_015548685_1_40_72	-	103684	.	.	hypothetical protein	MDNLKIVYKIQVGIEASMDSPVFDGTFLEALKISEERRNRILQSMIDNMNAKSFFYKKGVTDIDAVYVDSDIELTQFF*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0009	cloud	direct	high	236	0.996	GCA_015548685.1_01609
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	83480	83773	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	7012	7305	GCA_015548685_1_40_73	GCA_015548685_1_40_73	-	103684	.	.	hypothetical protein	MINQLINFIEKYLNNEPVDTPEGYEDIHVDKEQTEGNYYFYYFLEDFIGSEKGELTTEVDDIVEHIFDIAIEMEPMLDTTDMDIRLSMYYERLKEMV*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0010	cloud	direct	high	293	0.997	GCA_015548685.1_01610
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	84347	84493	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	7879	8025	GCA_015548685_1_40_74	GCA_015548685_1_40_74	+	103684	.	.	hypothetical protein	MEYTNRNIKINASENNAKQTTYDKQENYKKLENQIDKHIEVFKRLKDK*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0011	cloud	direct	high	146	0.993	GCA_015548685.1_01611
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	84495	84890	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	8027	8422	GCA_015548685_1_40_75	GCA_015548685_1_40_75	+	103684	.	COG3654	Prophage maintenance system killer protein  [Mobilome: prophages, transposons]. 	MNEIKYLTFDDIMTTHDIILQKTGGFSGINNAGLISSIVEHVKNDDYYPTMIDKLTHIVFSLVMNHAFNDANKRSSIACGVLFLNINGYDSVVDDFIVAMEDVVVSIAEGSISKGGLRVILRDIVSKKVIL*	mmseqs_cdd	nonviral_gene	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0012	cloud	direct	high	395	0.997	GCA_015548685.1_01612
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	85160	86488	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	8692	10020	GCA_015548685_1_40_76	GCA_015548685_1_40_76	-	103684	.	COG1705	Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility]. 	MTEQDIFIDKVKDGAIAGWHEGRILPSVTIAQACLESGWGTSDLAKNACNLFGIKAKEDWKGESYTVKTAEYDKNNKKFYIDAAFRKYRNWQCSLVDHARFFHTPAWREGNYKNVIGEVDYRKACKALQSAGYATSQKYASQLIGLIEMYHLDKYDEVAKIVSAAHKKESEVKDMVAFKYKQISNRRQIGGTRQKSSIKFIVIHYTGNDSKGANAMAHYRYLQSATRYGSAHYFVDDHEIIQVIGDSQVAWACGDNQGHGTALNGCTNQNSISIEMCINSDGDFSKTLFNTIELTKELLRLYPNARVCRHWDVSRKSCPAMMAGSTNPKWLAFLEEIKKPRRLILDLSKDSVATEGAGGGNVKQSTNVGTNKKKCVMYFNDGNRITAEFIAQQLGCKCYKDNGKDLPNSEHSKYDIKYIGNLGKNRQETAKEACKKFLGWKL*	mmseqs_cdd	nonviral_gene	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0013	shell	direct	high	1328	0.999	GCA_015548685.1_01613
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	86551	86802	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	10083	10334	GCA_015548685_1_40_77	GCA_015548685_1_40_77	-	103684	.	pfam16079	Phage holin family Hol44, in holin superfamily V. Phage_holin_V_2 is a family of small hydrophobic proteins with three transmembrane domains of the Hol44 family. These proteins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion. Full activity of the endolysin Lys44 from oenophage fOg44 requires sudden ion-nonspecific dissipation of the proton motive force, undertaken by the fOg44 holin during phage-infection.	MEFNLLNYINEGLVVMIPVLYILGVFLKKSRVRDELIPWFLLVISIVLCGIIARNVIQGIIQGVLVTGVCVLGSQLYIQTFKK*	mmseqs_cdd	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0014	shell	direct	high	251	0.996	GCA_015548685.1_01614
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	86804	87145	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	10336	10677	GCA_015548685_1_40_78	GCA_015548685_1_40_78	-	103684	.	UniProtKB:A0A0H3EA54_BIFBP	minor-structural-protein-	MIEILACWGQQILYVLVSGAIVGYVKRLVKSVQEDRKKDLIEHDALTRGLKSLLYSQIKKTAEDILAKGHISELELKELEADYQAYKGLGGNGFITKLYNQCMSLEVVVGREQ*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0015	shell	direct	high	341	0.997	GCA_015548685.1_01615
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	87157	88332	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	10689	11864	GCA_015548685_1_40_79	GCA_015548685_1_40_79	-	103684	.	.	hypothetical protein	MKLSEMLSAFDTQLKLYKRRIYQALQEAGISPTSKSLKTVPQDIKRLKSDAQFDIMALNVSQDGAIIYKGSPTGYYFNVSRDRRLSINNQKGLYIPPEFDKDRIYVDEESGELFYSGLILGKYVRFDGNSNKPFSVGDSKSIVQSDNFDASKLSIRSGDGYLTYKDKDIGKYVNINGYSNSPYSLSTSAGYSVPKAFNKSLITLDSDGELRYDGSRLTRYVNVNGTSLSLGSSSSLNWPPSWDPKKLTKIDSNDGQLYYDGGWVQGKYVNVNGKTLSLGSSKSLNWPEAFDKDKLTKIDSNDGQLYYEGQGWLSGKYVNIDGNSLSIGSSSRLNWPSSGGGYVSDHHRFNVAWGGDGLYYKSKNLGRRTVTFDVSAFGYGGGDLNFDVTYD*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0016	shell	direct	high	1175	0.999	GCA_015548685.1_01616
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	88349	88537	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	11881	12069	GCA_015548685_1_40_80	GCA_015548685_1_40_80	-	103684	.	.	hypothetical protein	MAKTTHRNYEKPLVTDAYDVNVFNKNFDMMDTDINQCMSDIDEVKKEIQASAEILRGMTENL*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0017	shell	direct	high	188	0.995	GCA_015548685.1_01617
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	88537	89100	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	12069	12632	GCA_015548685_1_40_81	GCA_015548685_1_40_81	-	103684	.	PFAM:PF10076.8	tail-protein	MIGYKDIYKADCLAYIPPVYSDILEFKALAKCFNLELERTGARLEEVENNFFIDSLNEYGCERWEKMLDIKTNYSNSVEDRRFAIKAKLLGLRPYTYERLKYFLINLIGEHNFILEMDYSKNHLTCKLNLGVKARMDAVKDLVEKTVPLNISTEVVLLYNTHKMLASKTHKELGKYTHTELREGSIV*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0018	shell	direct	high	563	0.998	GCA_015548685.1_01618
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	89087	90148	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	12619	13680	GCA_015548685_1_40_82	GCA_015548685_1_40_82	-	103684	.	PFAM:PF04865.13	Baseplate-J-like-protein	MDREISFDKTMGRMLGTIPDEFDKRETSIIYQAVAMVVPELMLIQSDIELMEEEAFPDTCNYNNLVRFSGLRNIQPRQATKGIVVAEFSKDVEIGTRFNCEERNYEVMEKIETNRYKLIAEETGHIESIGALTPINDMPDLKTAKIVSIYLDGREDESIESLRKRYMDSLDYQAFGGNRADYIEKVTSIDGVGACKVFRRPKATSSEVGKVTIVIVDTTYKNASEELIRSVTSALTPTDDGNGAGLAPIGHKVSVLGAEKQTVNVRSRITLDRGVDNINLELKKVVEEYLHELRSNFGSEEVTTVRISAIENKILGIKGVIDVSSTTLNGVERNLSIDERSIPVIGEVGYDRL*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0019	shell	direct	high	1061	0.999	GCA_015548685.1_01619
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	90141	90566	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	13673	14098	GCA_015548685_1_40_83	GCA_015548685_1_40_83	-	103684	.	pfam10934	Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	MIPNTRVPQEQFEKLLDTYENKKYSNKDFRLVGNRIKGYVDNDDALAQAIYFILSTERYQYISMSDNVGVEFWDLYGESGPTTELALASTIKEAILADTRVQEITSFEVERVERNTFKVTVEVLSSIGETVTVEKVVSIDG*	mmseqs_cdd	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0020	shell	direct	high	425	0.998	GCA_015548685.1_01620
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	90563	90913	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	14095	14445	GCA_015548685_1_40_84	GCA_015548685_1_40_84	-	103684	.	PF10844.8	Protein of unknown function (DUF2577)	MSNLLMTIKRIVHDTVKSMVMCDNLIGTVVSESPLKISINEKMILEEVHFIKLKNAIGNFPVEEVEVEGVLHHEGTHTIKSKGKGVCKHRLKKGSKVVLSRCFGGEQYVILGELIE*	hhsuite_tools	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0021	shell	direct	high	350	0.997	GCA_015548685.1_01621
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	90930	92948	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	14462	16480	GCA_015548685_1_40_85	GCA_015548685_1_40_85	-	103684	.	PDB:3CDD_F	Tail-protein	MTIENRDMHTYNCDVFITNKDNVYQVPITNGLEISWERKGVAGKCTFTVIQEEDGEIQFEEGDTVRVRISQRWMFYGFIFTLSRGKDRAVKITCYDQLRYLKAKESAVFVNKSVGEIVTMIANDRRLNKGTIRDSKYKIPTITKENSTYFDMIMTAIEKTTEATGEIFILYDRFGKLTLCPLKHMYRNVIIDANVIGDFEYESTIDKQTYNVIRVGYKSKKDGNTVYQTWKDEKSIAKWGMLQLTEKASNSFNAVTIGNQLLNMYNSKTKTLKIKNAMGANEVVAGAVILVNLNLGDMTLSNNMVVDAVTHRVEDGLYSMDLELIGGEFVSTRGVTTDQASNKGSSGKSSSGTTVAGAPDWGHGVTAAMMNKVLKGPLAGMGEKFVQLGNAYGVNPMLVAMIIRIESRPTMNSGLALKGNNFGGINAIKGFPTITMGGRAYAKFPSVAVGIEQQFRLLGVRYINDWKKKSIKDIIMTYAPPHENNTAGYINSLKTFYKQNTGVTWNEGLLGSGVSSVEEAHRRMSMKHEVNNGESSSSLENSPNNIIEHAIKFCMDRLGTPYSQKDRNSYKRNPVKPAHFDCSAMVYYAYADAGKLPKNVKNAWTTTEIANNPGAYGLRYVPLSQAKRGDVLWMRGHLGLYLGNGRAVESTPPRSQTCPSRKFTCAYRFRDF*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0022	shell	direct	high	2018	1.0	GCA_015548685.1_01622
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	92957	93706	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	16489	17238	GCA_015548685_1_40_86	GCA_015548685_1_40_86	-	103684	.	PFAM:PF06995.10	Tail-assembly-protein	MYLFYLDNILLPITPGKISTKVGGNNKTMELANSGEINLIKFPKLTEYSFDFELVHDIENIKYRASNHTPKEILDYLESAKVNKKVIVFRVLRKIGKKVRFPLEAKVTVESYEIEEDADNNSDITVNLTLKQFRPYRTNHLVNQADQKPRATINKPKEGKPDKKDAGKTKSIGVLKKVEIKTFLNIRSGAGTHNRIVAKFSPGEKPCVYGVFKHKGQDWYKVKHSRGDNGWGWISGNGKYVKVIANYGK*	common_virus_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0023	shell	direct	high	749	0.999	GCA_015548685.1_01623
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	93718	95877	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	17250	19409	GCA_015548685_1_40_87	GCA_015548685_1_40_87	-	103684	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSGIGLPVSVSDGLSSPFADMTKHVVELTNAYGKFQETVSRPVSYNVNDSIGQATMKQRQFNQSVSEGTGLMGNLVSKAKMLVGAYLGLQAAKQAIDLSDTYSGIQARVGMINDGLQSNHQLNLMIFDAANKTRGSYLDMAQTVTKLGILAKDAFNSNAEMIKFTELMQKSFKVGGAGLQEQKAAMYQLSQAMASGRLQGDEFRSILENAPMLAQAIKRELNGIDLKKASADGLITADVIKRAMFNSARDIEDRFGKMPMTIGEAWNVIKNNFVAGMAPMLEALNRLANNPYIRSFVDNSIIAFGLLGQVAGGIFDGINAGITLIGNNWQWLGPIVYAIVGAVALYGAALAAVAVWHGIVGAAEAVHAGVMILWTVATGQMTFAQWGFNSALLACPITWIIAGVIAVIGIYYALIGAFNHVTGQHVSGIGLICGLFGFMGAMVFNVAKNIINHIGIAAEFVANVFNHPTYSVMRLFVNLGKNALGVCKSMTKSFDSVATNIANAMISGANMAISAINWIIDALNKIPGVDIGKVGKMGYTSSITHSISNLESGLDKWLEASKPKDYKVIAPHLKYTDPMDWANKGYEMGANFSKSLKDKASGLIGKDKYKPEKQPDLSEALKNQGSGISPGGGAGNKAQRATAGNTKKTAENTEKFIDDIRYLREMAERQAINRFTTAEIKIENTIHNPQTQDLDGFVDALDNELTSQLERQVDGYYAV*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0024	shell	direct	high	2159	1.0	GCA_015548685.1_01624
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	95881	96018	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	19413	19550	GCA_015548685_1_40_88	GCA_015548685_1_40_88	-	103684	.	.	hypothetical protein	MHELHWTLPSILEMMDNDEFKAFIIASINIRTREEKKQARKLERG*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0025	.	unmatched_CDS	none	0	0	.
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	96060	96590	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	19592	20122	GCA_015548685_1_40_89	GCA_015548685_1_40_89	-	103684	.	pfam08890	Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	MISLWISLLLKISIHYTRGGVGILDPIPLYFIFYLTDKGVKTMSKFSAFMKKDLEKLEKEYVISDRFVDEAGNPIKFKLKPMPAMLEKLLSKECRTIKNDGTVEFDSEKYENEITENCVVYPDLRDVELQDFYGVQSVADLLNEMLNIGENRRLQEAIQDINGIKSFGEKVKEAKN*	mmseqs_cdd	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0026	shell	direct	moderate	405	0.763	GCA_015548685.1_01625
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	96559	97047	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	20091	20579	GCA_015548685_1_40_90	GCA_015548685_1_40_90	-	103684	.	PFAM:PF09393.9	tail-tube-protein	MTDKTIRKLNLTNETVSGSLGSVFAELNGRRYTLASLSKFKAKFKTNTTKKGVLGLSGKQSRPTGWEGTWEATFYYNQSTFRELARAYAEEGVMPTFSIQVINEDPSSLKTIGRQSVTFKDCVIEEMVLAAIDVEAEILDEEVSGTFNDFEYNDKFVDFPTA*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0027	shell	direct	high	488	0.998	GCA_015548685.1_01626
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	97057	98394	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	20589	21926	GCA_015548685_1_40_91	GCA_015548685_1_40_91	-	103684	.	PFAM:PF04984.13	Tail-sheath-protein-	MALGGGTFTTTDKMLAGAYINSVSAARSLSLIGDNGVVAIALEHDYGNTGEVMTLTPSEFREDSLSYLGYSLFDDKLKGLRELFENSKRVHIYVLNNTTKASNDLATAKKGGTRGNEIVIKVQNNLDNPEKKDVITMIDFMEVDKQTVTKASELQPNAFVTFKDTELTEKAGEKLKGGSDGNVTNGDHQKFLSLIETMSFNSVACMATTKEVQKLYIAYTKRMRDDIGLKFATILCEASDLGGDSQIYDYEGIVIVKNKVKGGSTKGNELVPYTAAIYANAQLGRSNLNRQYTGEYEVITDYTQLQLKDMIKAGRFVYHRVGDTVRVLEDVNGLVTFTDAKGSEFKDNQVVRVLDALAISDARVFNEVYLGKVNIDTAGKESYRNKIIDVREEFLKRGALKDYDKDSIQVVEIKSDEVRGAVKVDSSVTPAECFRQLYLTNYVRR*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0028	shell	direct	high	1337	0.999	GCA_015548685.1_01627
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	98394	98630	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	21926	22162	GCA_015548685_1_40_92	GCA_015548685_1_40_92	-	103684	.	.	hypothetical protein	MAKKKKEEELQKDEVQDVEPKEVKPKKVKSTFTKEQFKTSERYHYKQDLIEVLLDPYLKYTIEEVDKLIDEYMESEAR*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0029	shell	direct	high	236	0.996	GCA_015548685.1_01628
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	98623	99048	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	22155	22580	GCA_015548685_1_40_93	GCA_015548685_1_40_93	-	103684	.	PDB:5A21_G	tail-completion-protein	MFDDLINAITKKLIEYFSDSIPNIYSENIEQDFVEPCFYISLINSINKSKLGPRRSRRYKFDIMYFNGNLGNDNLNSMGDSLTTVLEDIQVGDNILHGFDIQYEIKDGRLHLFVEYPADMVFEMEKEPKMASLEERIKSNG*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0030	shell	direct	high	425	0.998	GCA_015548685.1_01629
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	99041	99520	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	22573	23052	GCA_015548685_1_40_94	GCA_015548685_1_40_94	-	103684	.	PFAM:PF04883.11	type-I-neck-protein	MGSIKGKADMRDLKNLERQFKKLEKKKTDEFLRFLTRDLARITLSNIIYKTPVVTGDLRRAWTGGVEMGAEEYVASKRVTKNGKTYKMMLKNNMKYASYVEYGHKQQVGRYVPELGVRLKKPWVDGQFMCQKSVAEVKSRYPSIAKKNLEKFLKENIDV*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0031	shell	direct	high	479	0.998	GCA_015548685.1_01630
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	99520	99894	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	23052	23426	GCA_015548685_1_40_95	GCA_015548685_1_40_95	-	103684	.	PFAM:PF10665.8	head-closure-knob	MVGDYMSHRKVIESLYKGVCDIYEYKSSKDPATGRVGKPKEVKVNSKQIPCRLSYNSSQAVTQAEGGILVQNIKLFMAPEIVVKPNSKIVVTQNGRTVAYKNSSQSMIYESHQEINLEIFDRWS*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0032	shell	direct	high	374	0.997	GCA_015548685.1_01631
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	99888	100265	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	23420	23797	GCA_015548685_1_40_96	GCA_015548685_1_40_96	-	103684	.	CDD:cd08055	Head-Tail-Connector-Protein	MDTKKTVIELLKPFGVEVAEDDFTLLFLIQSITQDILNYCNLKELPKELEHVVVRRVVANLLNSKLQASGVGSIEVEKGIKSITEGDVSVSYDTSLDKGVLISSFIKDNLNYGMDNLYSFRDFRW*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0033	shell	direct	high	377	0.997	GCA_015548685.1_01632
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	100274	100555	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	23806	24087	GCA_015548685_1_40_97	GCA_015548685_1_40_97	-	103684	.	.	hypothetical protein	MAKILAPNKKYYGVSASVSFVDGVGYTEDEDLIKWFDDHGYEVEEIEEIEEDSKDEKPKGRPRKSKPKPDESGDKTEGEPGDESNDSGEDKPE*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0034	shell	direct	high	281	0.996	GCA_015548685.1_01633
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	100559	101521	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	24091	25053	GCA_015548685_1_40_98	GCA_015548685_1_40_98	-	103684	.	PDB:3J4U_G	Major-Capsid-protein	MAVTLEQAKLNVQDDLQLGVIDEFRKSTWLFDNLIFDDVVSATGGGATLTYAYTRLKTQPTAAFRNVNEEYSTSEVEKQRFTADLKIFGGGFKVDRVIANMGGIADEVALQMAQKIKAAGALFNDTVINGDSGVDAKSFDGLEKALKGSSTEYKPEQVIDLSTSEAVTKNFQEFLDALDEFLMTLDGKPSFIAGNTKLIAKLRACARRAGMYQVTKDTFGNQVESYAGIPFVDLGTKPGTNEDVVKIEPGTGETSLYAARIGLDGFHGISMAGQPPVKTWLPDFTTSGAVKEGEVEMIAAVALKATKAAGVMRKIKVKAV*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0035	shell	direct	high	962	0.999	GCA_015548685.1_01634
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	101539	102090	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	25071	25622	GCA_015548685_1_40_99	GCA_015548685_1_40_99	-	103684	.	PFAM:PF06810.10	minor-structural-protein	MKREFLKNLELEDDVIDKIMAEHGKTTKKYLDKIDAKDTELGTLQGELKDVNDKLKSFDGIDIDKLKSEAEDWKGKYEGVLTDNAINDYFKDTKFTSDLARKATIAEFKEQKFELKDGKFTGADEFMEKFKKENETAFVKEGAAQNKPAVKGFTPAGTGDTDPSGGQQPKSLADAIKTKLSGE*	hallmark_hmm	common_virus	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0036	shell	direct	high	551	0.998	GCA_015548685.1_01635
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	102505	102744	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	26037	26276	GCA_015548685_1_40_100	GCA_015548685_1_40_100	-	103684	.	.	hypothetical protein	MGLLKSNGKVEDKYAVVILKDYINNYLAFSWLQMEIPRFFHRVQEGLNVKLEEIGNCAFPIVEYNRWMTKTPDIPLCYR*	.	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0037	.	unmatched_CDS	none	0	0	.
GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote	cenote	CDS	102774	103583	GCA_015548685.1	JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685.1_JADMXM010000006.1	GCA_015548685.1|JADMXM010000006.1	GCA_015548685_1_40	GCA_015548685_1_40@C6	26306	27115	GCA_015548685_1_40_101	GCA_015548685_1_40_101	-	103684	.	PFAM:PF02384.15	DNA-methyltransferase	MSIYESYYQIGGVKQHKEFEAYLERILFDKEERERFYREVLKINNDVSVDTFRQYFEEYAAERKSNQQDYTPDSVSKILATITRGSNNTDYSGYDMTAGTGTLIIQKWWDDMNCETPFTYAPHRYLYKADELSDSAIIYLIHNLALRGMNAIVVHGDVLEGTTKNIYFIQNSDDDYLHFSDINVMPRSDGIAMEFGVSEWIGEPIEHIESQEVMLNFAYPSIKEAFEVDYSNKPFEGKGLDYYHNRIKLKEVSHSIERSKKTRFIRKGQ*	phrogs_hmm	hypothetical_protein	C6	27216	76469	103685	GCA_015548685.1|JADMXM010000006.1@region_76470_103685@tool_cenote_CDS_0038	cloud	direct	high	809	0.999	GCA_015548685.1_01636
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	2	1204	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	3	1205	GCA_015548685_1_41_1	GCA_015548685_1_41_1	-	103371	.	PFAM:PF06152.10	minor-capsid-protein	MTKKANDYWIKRAHERSRADIRASDEVIKSINEAFYSTLKQIEKEIATLFYRYSEDNELDYDLAIKLLTGNEYKSFRMELEEYLGLIESSEILLELNTLSAKSRMSHLEESFFHIQKQIDKVYLHQSEVMQELMKDSVQKNYYKSIFDVGKVLAGDVAIKEFHKLTIDEIVKEFERPWSGKNFSERLWKNRTKLKDALEEEIIKMAVSGANPEQAADTIAKKMDVAKRTAATLVHTEQAYFSGFGSLKAYREMGVDKYIYIATLDMKTSDICRDLDHEVFDVSQAQAGVNYPPMHPRCRSATAPYTGKLEGTRTARDKDGNEVKVDKSLNYKEWYKQYVESNPEYLIEEKKWKNRHSDKKLHEKYRKIYGKDIPKTFEDFQKLKYNNSKELEDIKFRHKLK	hallmark_hmm	common_virus	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0001	cloud	ambiguous	low	16	0.013	GCA_015548685.1_01637
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	1188	2306	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	1189	2307	GCA_015548685_1_41_2	GCA_015548685_1_41_2	-	103371	.	PDB:5A20_A	Portal-Protein	MKTIIKTIKLQWNKIFKPVNECRKRYRVLKGSAGSGKSTNIAQDYIKKSSDSRYKGANLLVVRKVDESNRDSTFAELQSAIYKMFGDQAERVWKVTQSPLKLECLLTGNSIIFRGMKDDKQREKVKSITFKTGKLVWIWVEEATELAEADIDILDDRLRGCLGNPNLYYQITFIFNPVSSRHWIKEACWQYKGKNDVYELIDVTDHSFNDVPVVEYVNNKEEQGDFEQVISLIDAYNKSQSNTLNDMDQFTDAYLILVNMNGTDSKRISELKKDRVMLLDEDGDAKWLTKDIELFTDINIKFANTLPQNVYELSQTIKNLSPYLSNETLLNQLPFIDNAKEEVEKKKTEEESEVSERYDFTVNGGVINDEES*	hallmark_hmm	common_virus	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0002	cloud	direct	high	1118	0.999	GCA_015548685.1_01637
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	2290	2718	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	2291	2719	GCA_015548685_1_41_3	GCA_015548685_1_41_3	-	103371	.	PFAM:PF03592.15	Terminase-small-subunit	MIYHGLTLKQKKFADEYIISGNKCEAAILAGYSENYAKAQSHKLLENVGIKNYISERLSELENEKIADQKEIMKLITEHARRESIEYSVTKDGYIIKTPTSVTNAIKAAELLGKRYGMWTDKVDTTGNIEIRFEDDYGEDDN*	hallmark_hmm	common_virus	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0003	cloud	direct	high	428	0.998	GCA_015548685.1_01638
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	2966	3442	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	2967	3443	GCA_015548685_1_41_4	GCA_015548685_1_41_4	-	103371	.	COG0622	Predicted phosphodiesterase [General function prediction only]. 	MKLLILSDSHHSIDRLNKLLPIIEEEKIDIIIHAGDNFRDSVYLKEKSKKPVIGVIGNCDFENTDREIEFELEGLKFFLTHGHRYSVKYGPEILASKGQEIGANIVIYGHTHIKDDTYMGGLLILNPGSLSQPRDGSRGSYVVMDVDNGSYQYNYFYM*	mmseqs_cdd	nonviral_gene	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0004	persistent	direct	high	476	0.998	GCA_015548685.1_01639
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	3605	5032	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	3606	5033	GCA_015548685_1_41_5	GCA_015548685_1_41_5	-	103371	.	COG0689	Ribonuclease PH [Translation, ribosomal structure and biogenesis]. 	MAIIENPLGKKSEVACGYKEENTSSRPDGRSLDQIRDVKITRNYTKYSAGSVLIEVGNTKVICTASIEEGVPHFMKGAGSGWITAEYSMLPSATESRKKRDSSKGKVDGRSQEIQRLIGRSIRSVVDMEALGERTIWIDCDVIQADGGTRTASITGAYVALADALYKLYKSGQIKKMPVKNLLAAISIGIIDDEVRLDICYEEDSKAMVDTNVVMNNRGEFIEIQGTGEERPFTRDELSRILELAEKGNRDLMRLQRQALGEVADAIIGCEYKREAVIATGNMHKLEEIKTMLSDLDFKILSMKDVDLEGLEIIENGRTFEHNALIKARTIAKKTGMIAIGDDSGIEVDALDKRPGIYSARYAGENATDEDNRNKMFEELEGVPMDKRTARFVCVIALVFPDGKEILARGKVEGKIAIKTSGENGFGYDSMFIPEGYDETFGVLSPEIKNSFSHRSRALEIMKDKLIKVLAERTI*	mmseqs_cdd	nonviral_gene	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0005	persistent	direct	high	1427	0.999	GCA_015548685.1_01640
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	5119	7221	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	5120	7222	GCA_015548685_1_41_6	GCA_015548685_1_41_6	-	103371	.	PDB:5TT5_A	DNA-ligase	MTDREEIKLISFEEIEDIDIGSLDIDGARDLVGDLTYTLNYHSDSYYNKDNPEISDYQYDRMMRCLIGLEDKYPDLKAPDSPSVRVGGRALEKFDQYRHQRPMLSLGNVFSEEEIRDFDRRVRSSVSGDVNYVVEFKIDGLSVGLTYDQGVLQIGATRGDGFIGENVTDNIKTIKTIPIKIDEDRKLIARGEVYISKADFEAVNAYQIDHDLPVYANPRNLAAGSLRQLDSRLAAKRPLDIFIFNLENMDELGIKKHSESFEYMESLGLKINKGYKLCTNIDEVIDHIEYWTDKRGQLDYDIDGMVIKVDSLDQREVLGFTAKSPRWATAYKFPAEKKKTKLLDIEIEVGRTGTLTPTAVLEPIRLAGTSVSRASLHNEDYIKERDIRIGDTVLVQKSGEIIPQVLEVDFDERDGSEIVFEMPKHCPVCGEETVRLEGEAAVKCINISCPAQIRRGIIYFVSRDAMDIEGMGESIVKLLLDKELIKDIADLYYLDPNDLEQLERMGKKSVANLMASIEKSKTNELWRLINGLGIKFVGLKGAKLLAKAYNNLDEIMAASSEDLIKIDEFGTIMSDSVEKFFEEDKNKETIEKLRRAGLNFENIKEEKTDRPMLFEGMKIVLTGTLPTMKRNDAKKIIEDLGGRATSSVSKSTDFVLAGEEAGSKLDKAISLGVKVIDEARFVSILDLDSKEDVINSLANE*	common_virus_hmm	common_virus	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0006	persistent	direct	high	2102	1.0	GCA_015548685.1_01641
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	7223	7708	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	7224	7709	GCA_015548685_1_41_7	GCA_015548685_1_41_7	-	103371	.	cd03017	Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein,  Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	MTKERKLNIGDKAIDFTLEDKDGNKVSLSDYRGKKVILYFYPKDNTPGCTKQACNFRDNYPQIQEKGAEVIGISRDGQKAHTNFTAKHDLPFTLLSDPEREVIEAYGVWTEKKLYGKIGFGISRTTFLIDEEGTIVDIVDGKRMKAATNADDILKGDFLRD*	mmseqs_cdd	nonviral_gene	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0007	persistent	direct	high	485	0.998	GCA_015548685.1_01642
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	7856	8125	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	7857	8126	GCA_015548685_1_41_8	GCA_015548685_1_41_8	-	103371	.	.	hypothetical protein	MLENIGNEFEVFDYNMKGYRIGTFVFNYRLVEEDADTHVEIDVYKYSDPVVLYIKTYQAPLLDGAGPVDMCEALYEEFYEKSEDSSEEK*	.	hypothetical_protein	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0008	persistent	direct	high	269	0.996	GCA_015548685.1_01643
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	8141	8866	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	8142	8867	GCA_015548685_1_41_9	GCA_015548685_1_41_9	-	103371	.	PRK00110	YebC/PmpR family DNA-binding transcriptional regulator. 	MGRIHNIEGRKNKQDAARSNVFTKHARAIAVAAREGGGDPEYNASLKAAIVKAKSDNMPNDNIDRAIKKGVGGGDGENYESITYEGYGAGGVAIIVETLTDNKNRTAGNVRYYFDKNNGNLGTPGCVSFMFDRKGQIFISNENAEEEQLMEEALELGAEDFIPDEDGFEIITSPEDFNAVRDGLEEKGYEFVAADVKLLPQTTSVVDDEGQVKSLEKLLDILEDDDDVQKVHHNWEMPDVE*	mmseqs_cdd	nonviral_gene	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0009	persistent	direct	high	725	0.999	GCA_015548685.1_01644
GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote	cenote	CDS	9049	9807	GCA_015548685.1	JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685.1_JADMXM010000007.1	GCA_015548685.1|JADMXM010000007.1	GCA_015548685_1_41	GCA_015548685_1_41@C0	9050	9808	GCA_015548685_1_41_10	GCA_015548685_1_41_10	-	103371	.	pfam02540	NAD synthase. NAD synthase (EC:6.3.5.1) is involved in the de novo synthesis of NAD and is induced by stress factors such as heat shock and glucose limitation.	MSTRSEQINKTIQWIRERVEQAHCKGVIVGISGGIDSAVVAYLIKKAFPNDSMGVILNIKSNPQDRVDAMKVIDGCGIEYLELVLDEPQGMILEMVKDKLDEKGLYRPETRKMSDANLRARIRMSTIYTIANNMGYLVAGTDNAAELLTGYFTKYGDGGVDFLPLANLTKAEVYEWAKELGIHDDLISKAPSAGLWDGQTDENEMGTTYKYIDMVIEGKRDQVPEKDLAIIDRLHRVSEHKRVPVPRPPKWD*	mmseqs_cdd	nonviral_gene	C0	9808	0	9808	GCA_015548685.1|JADMXM010000007.1@region_1_9808@tool_cenote_CDS_0010	persistent	direct	high	758	0.999	GCA_015548685.1_01645