core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	947936	948583	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	1	648	GCA_016406225_1_1_888	GCA_016406225_1_1_888	+	2222669	.	PFAM:PF06152.10	minor-capsid-protein	MKVSREKLLKQQLDLIVKDSALDIHDEIENKLVDREVERQAHILGEHVKIDDTEVKAVVNSNFKGVNWSTRLCQDMAVVQKEVEKTTSNVLLRGRHPNEYVAKFKKQTNTTTYNASRLLVTESACVQAESQKLTYLKDLGEDGEYKYVAKIDKKTSKICHSLNGKVFKVKDMMPGVNAPPMHPWCRSTTVTHVGNWRDRFFTERKGKYQTENKES*	hallmark_hmm	common_virus	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0001	shell	direct	high	647	0.998	GCA_016406225.1_00931
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	948625	948978	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	690	1043	GCA_016406225_1_1_889	GCA_016406225_1_1_889	+	2222669	.	pfam15542	Bacterial toxin 50. A predicted RNase toxin found in bacterial polymorphic toxin systems that is proposed to adopt the BECR (Barnase-EndoU-ColicinE5/D-RelE) fold, and contains two conserved histidine, a serine, two lysine, and a threonine residue and a HxVP motif. In bacterial polymorphic toxin systems, the toxin is usually exported by the type 2, type 6, type 7, and MuF-type secretion systems.	MIRSGKIKLDINPEKQNRHSLNHSLYLKNKNFALKNNERLPSYTTLSINELNRLVQQYSTSGKILINKNGFNHKKVINFERIIGKAFIDGKYIETTFGKVHYSKTDSHIIPFISKEK*	mmseqs_cdd	nonviral_gene	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0002	shell	direct	high	353	0.997	GCA_016406225.1_00932
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	948980	949174	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	1045	1239	GCA_016406225_1_1_890	GCA_016406225_1_1_890	+	2222669	.	4A54_A	EDC3, MRNA DECAPPING COMPLEX SUBUNIT	MLIKDAYRKNVIVTLKNNEKFKGFVFDYENPLESDTGNYSLDLETDLGIYSIDESEIKSIKLIS*	hhsuite_tools	hypothetical_protein	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0003	shell	direct	high	194	0.995	GCA_016406225.1_00933
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	949335	949502	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	1400	1567	GCA_016406225_1_1_891	GCA_016406225_1_1_891	+	2222669	.	PFAM:PF14265.5	head-scaffolding-protein	MENNQSNITEETKHNDNLETTYEQTQQKEKTFSQEEVSQMIKDRLARKKRNLINV*	phrogs_hmm	hypothetical_protein	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0004	shell	direct	high	167	0.994	GCA_016406225.1_00934
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	949499	949882	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	1564	1947	GCA_016406225_1_1_892	GCA_016406225_1_1_892	+	2222669	.	PDB:6B0X_d	capsid-scaffolding-protein	MKDAIQEAEKLAKMNKDQKNQYELEKLLKENEELKAEKALSQMKNETRSMLNESGLENFDDQIVNILVNTDAEKTRKNVESFTNLLNQMVKSNVEKALRQDSPVSTQSNKMTKDEESDYLVSGRKCL*	hallmark_hmm	common_virus	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0005	shell	direct	high	383	0.997	GCA_016406225.1_00935
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	950133	950816	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	2198	2881	GCA_016406225_1_1_893	GCA_016406225_1_1_893	-	2222669	.	pfam07553	Host cell surface-exposed lipoprotein. This is a family of lipoproteins that is involved in superinfection exclusion. Proteins in this family have been shown to act at the stage of DNA release from the phage head into the cell.	MQQERQSWYQKSWFIILTLLFIFPLGLFLMWRYAHWKNWLKLTVSSVYIISLVLTLLFQVSLLNENKTNQIEHASTMKEKSNINNVKTTKNKNMEKSTQTDKQNSVNLKQNTKDQNNNANDEAASPTSEQNAAIAQAKSYANTLPISKKSLYKQLTSEYGEKYPADIAQYAVDHISVDYKMNALRLAKSYVKNINISNQALYDQLVSENGEGFTPEEAQYAMNHLDR*	mmseqs_cdd	nonviral_gene	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0006	persistent	direct	high	683	0.999	GCA_016406225.1_00936
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	950886	951911	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	2951	3976	GCA_016406225_1_1_894	GCA_016406225_1_1_894	-	2222669	.	COG2008	Threonine aldolase [Amino acid transport and metabolism]. 	MISFENDYLEGAHEKVLNRLVETNRIQAAGYGFDDFSAQAADKIRQRIDCPDATIRFLVGGTQTNQVVINSMLDSYEGVISADTGHVAVHEGGAIEFSGHKVLTIPSQEGKITAQDVENYIETFESDFKKEHMVYPGMVYISHPTEYGTLYTKEELQSLSRVCRRHQIPLFMDGARLGYGLMSNQTNVTIEDVAKYCDVFYIGGTKIGALCGEAIVFTKQNEPKNFTTIIKHHGALLAKGRLTGVQFLELFTDDLYFDISRHAIKMAEKVKKGFIDKGYQVYFDSPTNQQFFILSNDKIEELKQKVKFAVWEKYDNQHRVVRFATSWATTEENVNQLLELI*	mmseqs_cdd	nonviral_gene	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0007	persistent	direct	high	1025	0.999	GCA_016406225.1_00937
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	952225	952422	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	4290	4487	GCA_016406225_1_1_895	GCA_016406225_1_1_895	+	2222669	.	.	hypothetical protein	MQQIKFKTLTEETLESLEKSVNSFLKSQEGNGYKLLNITIKQIEERAFPHNDEDFNAILTLVTEA*	.	hypothetical_protein	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0008	persistent	direct	high	197	0.995	GCA_016406225.1_00938
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	952480	953952	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	4545	6017	GCA_016406225_1_1_896	GCA_016406225_1_1_896	+	2222669	.	PDB:2ZE9_A	Phospholipase-D	MNFGFLGTILTILLVVGFITNVVLAFVIIFLERDRRTASSTWAWLFVLFVLPVIGFILYLFLGRTVSKKKMEKNNGDELHAFEDLVQDQIDSFDKHNYGYINDQVIKHRDLIRMLLMKQDAFLTENNKIDLFTDGHKLYEKVLEDIYNAQDYIHLEYYTFELDGLGKRILDALETKLKEGLEVKLLYDDVGSKKVRLSKFKHFRALGGEVEAFFPSKVPLINFRMNNRNHRKIIIIDGQIGYVGGFNVGDDYLGLGKLGYWRDTHTRVQGECIDALQLRFILDWNSQSHRPQFKFDQKYFPKKNGDKGNAAIQIASSGPAFDLHQIEYGYTKMIMSAKKSIYLQSPYFIPDQSYINALKMAANSGVEVNLMIPCKPDHPFVYWATFSNAADLLDSGVNIYTYQNGFIHSKILMIDDEISSIGSANMDFRSFELNFEVNAFIYDEDIAKQLRQAFEKDIEQSKLLTKEVYDKRPLSIKFKEGLAKLISPIL*	common_virus_hmm	common_virus	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0009	persistent	direct	high	1472	0.999	GCA_016406225.1_00939
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	954130	955005	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	6195	7070	GCA_016406225_1_1_897	GCA_016406225_1_1_897	+	2222669	.	COG1131	ABC-type multidrug transport system, ATPase component [Defense mechanisms]. 	MIELRHISKSFKEHKVLEDISIDIKNNCCTALIGKNGAGKSTLIDIIVGNNHYDSGQIADKSNLLNRHKMGILFQKTEFPKYIKVCELLHLYQSFYQTFISFHQFKEITQFSDRQMNQFACNLSGGQQRILDFALALVGKPELLILDEPTSAMDVEMRQHFWNVIDKLKMNNTTILYTSHYIEEVERMADQVMMLDKGKIQLDDSPENIKRNQSYSVIRIPCKYQELINQLKHKYEIELIKNRYEIKTTDVSDVLQLLKQYHVNFNKIEILKKSLLEVMFSNDLSKGGNYQ*	mmseqs_cdd	nonviral_gene	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0010	persistent	direct	high	875	0.999	GCA_016406225.1_00940
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	955002	955733	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	7067	7798	GCA_016406225_1_1_898	GCA_016406225_1_1_898	+	2222669	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MISTYFKIELKIIFRKKLYLVMSIFLPVVFYLLFTSILDMPEEAKLKFYKEYMYSMTVFSLMNFCLLSFPLDLIEERNQGWYKRLMVTPLSSFQYYLVKISKTMCQFIIAIIIIFSVAHFYKDVHMTVFQWIFSALTLWIGVSLFLTLGLIIAQLNDIQKASSFANLLNITLAILGGLWFPVNTFPDWLQSISKNMPTYNLKLLAIDLAQDKVVNIEAIGYLIVYSIIFMSIALFMNKKGDVS*	mmseqs_cdd	nonviral_gene	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0011	persistent	direct	high	731	0.999	GCA_016406225.1_00941
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	955733	956827	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	7798	8892	GCA_016406225_1_1_899	GCA_016406225_1_1_899	+	2222669	.	COG4585	Signal transduction histidine kinase  [Signal transduction mechanisms]. 	MESRSWGARIGELSTLIYLIFPILAIFVDKRGNLFTYLIVCTIFIISYVTMILFYKHLSDSILYSLLVIHYLGIFYFVYSVNPMNSLFFFYSAFALPFIFNVRVVSKEFITFLIAMISCLILTYIFNPTFVVALSAFYLVILIVAVGNFKNRDERIMKAKLEEKNKYINVLIAQQERNRISQDLHDTLGHVFASLTLKSELAVKLIDTNPKEAKNEMQAINQLSTEALNKVRLIIDDLKIQSFEDEISSLEHLLQNANLHFKFNNKSAAKSLNPAKQSILSMIFREAINNVIKHAHATEVIGELKVHEHQIILKIKDNGVGIENEDASNLKSIKERVDYLNGKLIVQSNNGTLIIVEIPRGDLL*	mmseqs_cdd	nonviral_gene	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0012	persistent	direct	high	1094	0.999	GCA_016406225.1_00942
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	956824	957426	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	8889	9491	GCA_016406225_1_1_900	GCA_016406225_1_1_900	+	2222669	.	cd19930	phosphoacceptor receiver (REC) domain of DesR and similar proteins. This group is composed of Bacillus subtilis DesR, Streptococcus pneumoniae response regulator spr1814, and similar proteins, all containing an N-terminal REC domain and a C-terminal LuxR family helix-turn-helix (HTH) DNA-binding output domain. DesR is a response regulator that, together with its cognate sensor kinase DesK, comprises a two-component regulatory system that controls membrane fluidity. Phosphorylation of the REC domain of DesR is allosterically coupled to two distinct exposed surfaces of the protein, controlling noncanonical dimerization/tetramerization, cooperative activation, and DesK binding. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	MISLVITEDQLMLRKAMVQLIEMHEEMNVIKDFENGVEALEFIENNEPNVAILDIEIPGLTGLEILSYVRKKQLNTRIIIVTTFKRPGYFEKAVANDVDAYVLKERSIDDLIKTIYKVTKGEKEYSPSLMTSLFTESNPLTHKEQVVLREIGNGLSSKEIASKLYLSNGTVRNYTSTIIDKMNSDHRFEAWKKANEKGWI*	mmseqs_cdd	nonviral_gene	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0013	persistent	direct	high	602	0.998	GCA_016406225.1_00943
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	957609	957818	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	9674	9883	GCA_016406225_1_1_901	GCA_016406225_1_1_901	-	2222669	.	.	hypothetical protein	MMLGVKEMDTSNENKITIIAVIVAIIVGVVLQIVFKLPLIVSLVGSVFLGMFVGFIVYLIQSFRRKKKN*	.	hypothetical_protein	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0014	persistent	direct	moderate	189	0.9	GCA_016406225.1_00944
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	957977	958498	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	10042	10563	GCA_016406225_1_1_902	GCA_016406225_1_1_902	+	2222669	.	PDB:1RKN_A	Thermonuclease	MSSLLVVAMIGILVIIFQFVNHSGPFSDSESQHQSDNSNLNGKDKVYVKRVVDGDTFVAQKNGEEIKVRLIGVDTPETVKPNTPVQPYGKQASNYTKKYLTHQNVYLEYDKEKTDRYGRTLAYVWLKNGDMFNESLVKKGLAREKYFSPNGKYRDTFVNAQDEAKKRKLNIWS*	common_virus_hmm	common_virus	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0015	persistent	direct	high	522	1.0	GCA_016406225.1_00945
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	959234	960106	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	11299	12171	GCA_016406225_1_1_903	GCA_016406225_1_1_903	-	2222669	.	.	hypothetical protein	MSLTIILSIIIIILIMAMVLNQKFMKDRVETEEYARNQLISKNSILSEENLSLKNQMLSTNNDVGQHAFKNAKRELRKILNRFKEEGRLRSYTIVPTSNLAVKHPLFEYARSFDFIIITDVGLINVDVKNWNQKTFYHFDVPDQHLEEGQPQYNTEKVVGHYISNRYHSQFKTTRSGVYTFIEILQDNRVIYEFYDHDPYDKAANNAKALKDKIENDYNFKIQSIGVIYFSDGSVNIIEGSDESDKYVDTVSTPISLEKVIEEAIDLSKHPLTDKQIEEISESFKQHMNN*	.	hypothetical_protein	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0016	persistent	direct	high	872	0.999	GCA_016406225.1_00946
GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote	cenote	CDS	960433	961032	GCA_016406225.1	CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225.1_CP066303.1	GCA_016406225.1|CP066303.1	GCA_016406225_1_1	GCA_016406225_1_1@C70	12498	13097	GCA_016406225_1_1_904	GCA_016406225_1_1_904	+	2222669	.	.	hypothetical protein	MFVKEEKPVNKIVEILRKTSSHLFKFHGEVAMHLFLNDDFILPSKIDICVERKKLLEIIRVIPEEFTIHYYDNQLYERLRESLSLSDVEHVKVFKNDTEVMTIFVYDVVNDEWLFRLDHHIRLPKNNIYFHSLSWNVDYIKPEIVLMYDLMSEQKYHQFSNYKAVIDSLSYYQFYILKLVVGEQRIKKAIVNSSTKKIS*	.	hypothetical_protein	C70	13097	947936	961033	GCA_016406225.1|CP066303.1@region_947937_961033@tool_cenote_CDS_0017	persistent	direct	high	599	0.998	GCA_016406225.1_00947