core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	585841	586239	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	1	399	GCA_016861285_1_1_563	GCA_016861285_1_1_563	+	1852308	.	PFAM:PF06141.10	Minor-tail-protein	MLIHEEIRDEVIERLKPTLSSHVKRFYSGRILGLNPSEQCPAISVYLEDISLDQTCLCDSELNATLNIAIYLKPHSGEDELDNIAELIRNTIYNSELKSVLNISLKSYDYNYDEEQAAWISSVLQFAINYDE*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0001	shell	direct	high	398	0.997	GCA_016861285.1_00594
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	586249	587439	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	409	1599	GCA_016861285_1_1_564	GCA_016861285_1_1_564	+	1852308	.	CDD:COG4653	Major-Capsid-protein	MLKKLIELRQQKAEKVAEMRAMLDKAEKENRSLNESESVEFEKLKDSSKQISAEISKYETVTDEERSLEGNVSPVEQRGAKQFSNDELRHYIKTGELRNLTTANGEDGGYSVIPQLDKDVMKRLTDDSVMRQLCNVVRLPVGAKEYKKLVSAGGATVERGTEGTARNGTTTPKLHEVTIALNSIYAYPKTTQEILDFSSIDVLGWLTDEISESFTETEEIDLTDGDGTKKSKGFLSYERSTEADKVRAFGKLQKLEVAGADKITADTLIDLFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDFIWRDGLTVDAPSTLLGRPVYFLETMPASGANKPVVAFGDFKRGYFIVDHETGVRTRPDNITEPGFYKVHTDKYLGGGVVDSNAIKVIETTA*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0002	shell	direct	high	1190	0.999	GCA_016861285.1_00595
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	587484	588050	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	1644	2210	GCA_016861285_1_1_565	GCA_016861285_1_1_565	+	1852308	.	CDD:COG3740	head-maturation-protease	MKKEFEIRSATIATDEENQKLVGYAVKWNSPSQVLYCDFVESFAPKAFSESLASGEDVRALFEHDYTKLLGRTSAGTLKLEEDSIGLRFELTPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVQKAELFEVTVTSIPAYPESSVEIAKRSMVAAKEKTQKHSTALLKQWLDVMEA*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0003	shell	direct	high	566	0.998	GCA_016861285.1_00596
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	588052	589284	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	2212	3444	GCA_016861285_1_1_566	GCA_016861285_1_1_566	+	1852308	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSEPTTIEELLSYMGVNNTGAGEFVSPQTAESLPAVMNAVTVISEAVASMPCYLYALKEDGRERIYRHPVEYLLNEMPNRSQTPYQFKNTMMRHCLLNGNAYAVIEWNNKGEPISLTPYQPSAVNIFRKVTGKYIYQITDLNGVTKNYLQDEILHLRHSSIDGFMGRSPITVCRETVGLGLAQQRHGAAIMKNGLMASGLISTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNTNKRYLIEFDTSDLLRTSQSERFSSYDVAIKAGVMSPNEVRRREGLPPYEGGDEFSQAWKQTVEVKRGDEQEQGASNGSDA*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0004	shell	direct	high	1232	0.999	GCA_016861285.1_00597
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	589268	589624	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	3428	3784	GCA_016861285_1_1_567	GCA_016861285_1_1_567	+	1852308	.	PDB:2KZ4_A	Head-tail-adaptor	MAVMLKAGKYNKVITIEARNYPRERETNLHGEHKAFWKHIATVRASVEPLQGREYFSGPFQMGENIIRIRIRYIEGITNKMRIKYGKRLFDIYSVIDSMESHRELQLMCKEGEAYGEY*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0005	shell	direct	high	356	0.997	GCA_016861285.1_00598
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	589611	589925	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	3771	4085	GCA_016861285_1_1_568	GCA_016861285_1_1_568	+	1852308	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MENINLTLDDIKAHLNLDHDLDDALLETYKVATLEVCQKHIGKTFGDEETENTVPFTPSIKVGCLMYIAYLYTNREAITDLANLKQAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0006	shell	direct	high	314	0.997	GCA_016861285.1_00599
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	589936	590292	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	4096	4452	GCA_016861285_1_1_569	GCA_016861285_1_1_569	+	1852308	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLKRCSYPGCRNKVKSGRCEEHKPKDNRPSSSARGYNHKWSKYRAQYLKHHPLCVMCLEKGIYTPATVIDHIKPVENGQADPLFWVESNHQSLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	590522	590896	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	4682	5056	GCA_016861285_1_1_570	GCA_016861285_1_1_570	+	1852308	.	CDD:COG3747	Small-Terminase	MTAKKKNLHTPPSFLDPIAKSVWKERIPQLLERGDIQDADLIHLELYCVNYSLFRAAVEDIHKNGFSIVNSQGTQSRNPALSAKADAEKVMVKMSSLLGFDPVSRRKNPVEVDSTDMIDEILTM*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0008	shell	direct	high	374	0.997	GCA_016861285.1_00600
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	590904	592571	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	5064	6731	GCA_016861285_1_1_571	GCA_016861285_1_1_571	+	1852308	.	CDD:COG4626	Large-Terminase	MAIWHEYAEKIQSGEIVACKKIKQAVARYFNDLNNPDYFFDQSAVEKFIAFSKLCPHVKGHLRGEPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTVAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSPLLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEENEIDKQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLVTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAQRFNIKMIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQMIEHHGDPVLTWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYGDLIFELSDEHKHALEQFNGIDL*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0009	shell	direct	high	1667	0.999	GCA_016861285.1_00601
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	592587	593054	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	6747	7214	GCA_016861285_1_1_572	GCA_016861285_1_1_572	+	1852308	.	PFAM:PF04883.11	tail-component	MAVQIKGLKELEQNLKKLNKDINKVAAKAIRKGLNSAAKSIEKTIKPNVPTLKSSTNFRQKGTIKNNVRHKTRVAKDGLSGITAIRVMRTNGRRMAKIGENTRDKSDPFYWWMVEYGTVKMKGRHYMEKGFKSGEAQALRIAKEVAEEELKKAFK*	hallmark_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0010	shell	direct	high	467	0.998	GCA_016861285.1_00602
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	593325	593627	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	7485	7787	GCA_016861285_1_1_573	GCA_016861285_1_1_573	+	1852308	.	.	hypothetical protein	MFDGLLIIFLVFLCFLMIAALGVYSVPIFIAFIAWFWWIEKKAIKKAEEKMIMEKTLKQMEDEFRKKQEENKPFISGTITHIGNDGKETRLGNITIHLKE*	.	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0011	shell	direct	high	302	0.997	GCA_016861285.1_00603
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	593727	594731	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	7887	8891	GCA_016861285_1_1_574	GCA_016861285_1_1_574	+	1852308	.	.	hypothetical protein	MVSQKFLPKKAYSIIDAVKYISLNYNINISEYDLLEYIQSGDLQASIHLDGRINKIDRVNKREIPHNKTLNIRNEEIFLQFNQKDTKSKIEHNEDFNIYQIKLNHIYFSIDIILNDCYYLPKYFSENNEIKLYTGELDRFRNLVFNGYFPLSKEVFEPYNTIELMECGYIDEFPDIYVNTFSGLYLHLPICENRTELYLEDVYIIHEDMIEFLKLFSVIDDSYEQQEETQKLKNQIRDKNKQIEELQKQIEKNSKVKKSTASENKKNEFIKALLQIKYGAEVAENPRPHVYDPNDSDKGKDGVIQRDFESKGLTKHLPSGKTLKNWVSSVELDN*	.	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0012	shell	direct	high	1004	0.999	GCA_016861285.1_00604
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	594875	595078	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	9035	9238	GCA_016861285_1_1_575	GCA_016861285_1_1_575	+	1852308	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MNLNLNPNQKLISGETACHIVGFGRTKLNLLVKAKKFPQPIRFSKNFVRWDLEEVNKWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0013	shell	direct	high	203	0.995	GCA_016861285.1_00605
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	595184	596113	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	9344	10273	GCA_016861285_1_1_576	GCA_016861285_1_1_576	+	1852308	.	PF10554.9	Ash protein family	MNLIHKYYINNENFYNLNPLQSAVKFGIISPQSQKTIAEPRNSTYLQLAQSTPKACFFMRNIRTPKEFADFVFIDQIYKSLSMVACSGKGSPFAVFQLSQFSRPLHVTAKASKLYAVTLKCLQLELRKMYQFIFALIRAPQIKIRLLADNEQQARSRFTDGDTLLFVGRINQNPFKNNRTFSTNVNNHSLPKCEDVGSIESTITRKGNRNPYQCGIFLPKIHSLHVPEKSGALSYIEFAVRLRDRNKALSTNQIRSFRGVVETVLHPMGDTSKNTKHGNPTMKIYPKNNRTLAALPTLSVSATQGGANV*	hhsuite_tools	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0014	shell	direct	high	929	0.999	GCA_016861285.1_00606
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	596106	596474	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	10266	10634	GCA_016861285_1_1_577	GCA_016861285_1_1_577	+	1852308	.	.	hypothetical protein	MFDQAVLKALQDKASFNEFNPFSRIAKATKKDLESLRNESEMLCESIEYGLMHLGDLMQTLGNLADTEQDFTREAMSNDNVKHIGGLIKANAYLLNALRETASLSEYYLAGGLDGEIERNDD*	.	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0015	shell	direct	high	368	0.997	GCA_016861285.1_00609
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	596464	596664	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	10624	10824	GCA_016861285_1_1_578	GCA_016861285_1_1_578	+	1852308	.	.	hypothetical protein	MTIKPNLPYQLIFVYDDGDQFIAGKYGTLREALQAKIRCKHEIGQTDICGRVLEVITVLKGEENES*	.	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0016	shell	direct	high	200	0.995	GCA_016861285.1_00610
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	596654	596860	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	10814	11020	GCA_016861285_1_1_579	GCA_016861285_1_1_579	+	1852308	.	.	hypothetical protein	MKAKKIKSFKEPYVPTPEQLEKACKRIKQFLAFAEDYLHTGHYKGLAASIEQIKKAATIRKVAQHETK*	.	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0017	shell	direct	high	206	0.995	GCA_016861285.1_00611
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	596847	597389	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	11007	11549	GCA_016861285_1_1_580	GCA_016861285_1_1_580	+	1852308	.	.	hypothetical protein	MKPSNPMQQLQQWKDNRNANLHSANTNKLKNELVKSAVKSANQPNSGLVKNLQGETKNKYQGKLYANPLAFKFAQLTRQFKLILDSNRKCLEVYPDDFHHKIKFRDELTDLVVRLKTGGKLFNEMVKTQGAKLNPNNQETIRNFNQANDYLIHKFGEVIKQIEQLQVENIEKQKLINEEK*	.	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0018	cloud	direct	high	542	0.998	GCA_016861285.1_00612
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	597391	597834	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	11551	11994	GCA_016861285_1_1_581	GCA_016861285_1_1_581	+	1852308	.	.	hypothetical protein	MDMDQKLDYSKLSALELKAIAMSYRNMLENKGETFHSSLPYLNGAIEVLAEELADCPAMNIDELKILHDELLMVNKHLLQMAPKPSSSNPEEIVATLTNDEIIDGLLKNSIALSLVKTFKYFQEVIADRINVIENGVIKGVNNGTIN*	.	hypothetical_protein	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0019	shell	direct	high	443	0.998	GCA_016861285.1_00613
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	597818	599587	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	11978	13747	GCA_016861285_1_1_582	GCA_016861285_1_1_582	+	1852308	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQIHEPYSDIFILAGRKAWQAWDNGKGEEWLLLCSLIHGLDRNIKPVILAENQLENISSIRIVKEDQRSVKLVQYGELAQAEITAICQNLAKNSYAIDVKLLDAAAQTKEDLSGYIQRLRNDKETADFAEQLAPPEKLKEKDGTNKKSRAFQKWLNLDMALQRGCREIYAYDGKTWNKQENDELEEKAVKFLDENEFNYSDSTIERLIKTLKAQLPRMGEMSNDLIAFENGVLNRNTMEFESHNRQNWLTSCIPHKYDKHVTDTPHFDKWLSFVSDGNKEKARNILAVLYAILTNRYNWQMFFEITGKGGSGKSVFASIATLLAGVKNTASSNLEKFDDERGLSGLENKTLILCPEQSKYAGDGSGLKSITGGDTVRVRYNYQDPFDVKITALVMLINNRPCSFTERSGGVDRRRVIFDFKKIVPEDERDPHFMDKITLEVGGIIRKVFDSFPDPSDAKKALKAQMESQEALEVKKLSDPLTDFFGYFYTTEQTDGLFIGVTNMGLDKIRTHLYPAYLAYTKAMNIGELGLNNFVIGVEQALKQNGNKHDFMKRHTKTGRRTNIHFKDFDSFRNEMFS*	rep_hall_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0020	shell	direct	high	1769	0.999	GCA_016861285.1_00614
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	599759	600985	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	13919	15145	GCA_016861285_1_1_583	GCA_016861285_1_1_583	-	1852308	.	PDB:1Z19_B	Integrase	MARIVKPLSPTEIKNAKPKEKEYTLSDGEGLLLLILPSGSKSWRFNYARPLTGKRTKMALGGYPELSLADARAKREEYRALLAKGIDPQEEKIRIQQEYENRLKDTFHSVAESYFNGIYKEKAKNPETREKNWERLKNHIFPYIGDKHVSEIKVKELVSIYEKIADRSNTLKKIHQLVGAIMDHAITKGIIESHNCRLAVKNFYIKSSTPHPTIKLDELSKLFQDLENARIGKKTYLLICWSFLTALRPKEAVNAEWSEIDFDNKLWNIPKEKMKGQADKKRPHTVPLSSQAIQLLEVMKLFSENSSFVFAGRSSKNQPMNKATVNVALKRIGYKDKLTAHGIRAFIKTFLASNKVERNVSETILSHLLEGGDDLENTYNRYNYLEERKPIMQLIGDYCESCGMNLNL*	common_virus_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0021	shell	direct	high	1226	0.999	GCA_016861285.1_00615
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	601283	601624	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	15443	15784	GCA_016861285_1_1_584	GCA_016861285_1_1_584	-	1852308	.	COG1314	Preprotein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport]. 	MYQVLLFIYVVVAIALIGFILVQQGKGANAGASFGGGASGTMFGSAGAGNFLTRTSAILATAFFVIALVLGNMNSHKGNVQKGTFDDLSQAAEQVQQQQAAPAKDNKNSDIPQ*	mmseqs_cdd	nonviral_gene	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0022	persistent	direct	high	341	0.997	GCA_016861285.1_00617
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	601733	603688	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	15893	17848	GCA_016861285_1_1_585	GCA_016861285_1_1_585	-	1852308	.	PDB:5D5H_A	DNA-topoisomerase-1	MRLFIAEKPSLARAIADVLPKPHQRGDGFIKCGDNDVVTWCVGHLLEQAEPDAYDPKFKQWRLEHLPIIPEKWQLLPRKEVKKQLSVVEKLIHQADTLVNAGDPDREGQLLVDEVFSYANLSAEKRDKILRCLISDLNPSAVEKAVKKLQPNRNFIPLATSALARARADWLYGINMTRAYTIRGRQTGYDGVLSVGRVQTPVLGLIVRRDLEIEHFQPKDFFEVQAWVNPESKEEKAPEKSTALFSALWQPSKACEDYQDDDGRVLSKGLAENVVKRITNQPAEVTEYKDVREKETAPLPYSLSALQIDAAERFGMSAQAVLDTCQRLYETHRLITYPRSDCRYLPEEHFAERHNVLNAISTHCEAYQRLPNVISTEQRNRCWNDKKVEAHHAIIPTAKNRPVNLTQEERNIYSLIARQYLMQFCPDAEYRKSKITLNIAGGTFIAQARNLQTAGWKELLGKEDDTENQEPLLPIVKKGQILHCERGEVMSKKTQPPKPFTDATLLSAMTGIARFVQDKDLKKILRETDGLGTEATRAGIIELLFKRGFLTKKGRNVHSTETGRILIQALPDIATQPDMTAHWESQLTDISQKQATYQQFMHNLNQMLPDLVRFVDLNALRQLSRIKMIKSDRVKPKSAVKKSSKSNGETD*	common_virus_hmm	common_virus	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0023	persistent	direct	high	1955	0.999	GCA_016861285.1_00618
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	603704	604306	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	17864	18466	GCA_016861285_1_1_586	GCA_016861285_1_1_586	-	1852308	.	COG0353	Recombinational DNA repair protein RecR [Replication, recombination and repair]. 	MQSSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRDFTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQID*	mmseqs_cdd	nonviral_gene	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0024	persistent	direct	high	602	0.998	GCA_016861285.1_00619
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	CDS	604439	604768	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	18599	18928	GCA_016861285_1_1_587	GCA_016861285_1_1_587	-	1852308	.	TIGR00103	DNA-binding protein, YbaB/EbfC family. The function of this protein is unknown, but it has been expressed and crystallized. Its gene nearly always occurs next to recR and/or dnaX. It is restricted to Bacteria and the plant Arabidopsis. The plant form contains an additional N-terminal region that may serve as a transit peptide and shows a close relationship to the cyanobacterial member, suggesting that it is a chloroplast protein. Members of this family are found in a single copy per bacterial genome, but are broadly distributed. A member is present even in the minimal gene complement of Mycoplasm genitalium. [Unknown function, General]	MFGKGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTTGMPLPPGMKFPF*	mmseqs_cdd	nonviral_gene	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_CDS_0025	persistent	direct	high	329	0.997	GCA_016861285.1_00620
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1255831	1256913	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	1	1083	GCA_016861285_1_1_1185	GCA_016861285_1_1_1185	-	1852308	.	TIGR00492	alanine racemase. This enzyme interconverts L-alanine and D-alanine. Its primary function is to generate D-alanine for cell wall formation. With D-alanine-D-alanine ligase, it makes up the D-alanine branch of the peptidoglycan biosynthetic route. It is a monomer with one pyridoxal phosphate per subunit. In E. coli, the ortholog is duplicated so that a second isozyme, DadX, is present. DadX, a paralog of the biosynthetic Alr, is induced by D- or L-alanine and is involved in catabolism. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]	MNVKPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQNVDCFGVARLEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKVWLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFLSVTKDKQGERTIAASGGILFWPESHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSSLIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPSNVPEGTPIYLNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKLTPRVITEYVD*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0001	persistent	direct	high	1082	0.999	GCA_016861285.1_01261
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1256923	1258329	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	1093	2499	GCA_016861285_1_1_1186	GCA_016861285_1_1_1186	-	1852308	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSSDKKTAQVSIPPHSIEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0002	persistent	direct	high	1406	0.999	GCA_016861285.1_01262
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1258471	1259907	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	2641	4077	GCA_016861285_1_1_1187	GCA_016861285_1_1_1187	-	1852308	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIGRAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQSGLNAKIVAKVERAETVANDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVAAIVTLSSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPIYHGEESRTEAGAKAALQSLKEKGYLSTGDLVLVTQGGQGATQTNVCRTLIVE*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0003	persistent	direct	high	1436	0.999	GCA_016861285.1_01263
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1260447	1261700	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	4617	5870	GCA_016861285_1_1_1188	GCA_016861285_1_1_1188	+	1852308	.	PDB:1Z19_B	Integrase	MPKLVKPLTTTEITKAKPKEKDYSLSDGYGLFLFVRVTGSKIWRFQYYKPIIKKRTIISLGSYPELSLADARVKRDEYRGLLAKNIDPQEHNFILEQEALQEKENLFSTLAEKWFEFKHHEVKAGNLKQVTYDDIVDRVTRHLLPHFGHMELKNISAPLARNKLKYLEKEGKLDTLHRVIGYMSKIMTLDVNIGLLHSNPIANLSEGFLRPIAENNPTIPPERLSEFFAALQSSKMSLEVRCAIELLLLTATRVGALTQMEWSEINFDEKLWYIPKHKMKGRVGKVQDFIAPLSKQALAVLAVMKKLTGNQKYVFTGFKNSNEPMNKETPNKAIKRMGYQNTLTAHGLRSIFSTEMNDAEFNSEIIEVCLAHFEYSSVRGTYNKAKYLTQRIEYMQWWGDFVEERARESAAMCLTSD*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0004	cloud	direct	high	1253	0.999	GCA_016861285.1_01265
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1261697	1261912	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	5867	6082	GCA_016861285_1_1_1189	GCA_016861285_1_1_1189	-	1852308	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MQEVFIGVNMTEELLRLKNTARVLDISRSTLLRRMKDDKDFPEPIKIGRFLYWRSTDIQRYIDCKQAQMAN*	phrogs_hmm	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0005	shell	direct	moderate	189	0.875	GCA_016861285.1_01266
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1261941	1262366	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	6111	6536	GCA_016861285_1_1_1190	GCA_016861285_1_1_1190	-	1852308	.	pfam13876	Phage protein (N4 Gp49/phage Sf6 gene 66) family. This family of phage proteins is functionally uncharacterized. The family includes bacteriophage Sf6 gene 66 as well as phage N4 GP49 protein. Proteins in this family are typically between 87 and 154 amino acids in length. There is a conserved NGF sequence motif.	MNSINTEFLQQQIADTAYHQLDGTTITIAVIKLHSGFTVTGESACVDPNNFDVEIGKKIAYENAFDKLWQLFGFELKQKIGGDWIYRLQRERNELAERLDKLKAYLDGMKECDPDRLKLLNKQVGAMDDYLDILNQRLAYV*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0006	cloud	direct	high	425	0.998	GCA_016861285.1_01267
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1262363	1262932	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	6533	7102	GCA_016861285_1_1_1191	GCA_016861285_1_1_1191	-	1852308	.	.	hypothetical protein	MIRNSRWTPEVPRPTLNDEHLFAAFLKEWVEKEYKDEVNSAKKYFEDEEFDIEDFGIYQSILKEWIGDNEDTAENLIKWQGWDYRQAKEFEEKNLEYDFDKENNRLSKQWVTDNVYTLPFSVGSRVKLGLKEGIIMEDKNNNYLPFGKVCVLADKQAAKNKKWQDQGISSRHGGYIVNWESLELIEEKQ*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0007	shell	direct	high	569	0.998	GCA_016861285.1_01268
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1263035	1263469	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	7205	7639	GCA_016861285_1_1_1192	GCA_016861285_1_1_1192	-	1852308	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGYLGSDPEIRQFQNGGQIATFNLAIGDDYRDRQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDSKASSETQQPSKDKEKPGPLNAAAEQDGFNDDIPF*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0008	shell	direct	high	434	0.998	GCA_016861285.1_01269
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1263469	1264119	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	7639	8289	GCA_016861285_1_1_1193	GCA_016861285_1_1_1193	-	1852308	.	PDB:3SZ4_A	Exonuclease	MEMYQLKARCSGLADLMVKPKSGNGISATAKSAVRKIVKFDLFGYRDFEGNKYTEKGIALEEQAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRRLIIDTKCSWDIGSHPFFADEAEEKAKKAGYDAQMQGYMWLWDCDEAQIDFVLLPTPYDQLSSYDDPNRYIDLVEQIPQEKRITTVTIKRDEKVIEKIKERVEIAQEYYQQLIQEMR*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0009	shell	direct	high	650	0.998	GCA_016861285.1_01270
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1264094	1265014	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	8264	9184	GCA_016861285_1_1_1194	GCA_016861285_1_1_1194	-	1852308	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQTPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNSMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0010	shell	direct	high	920	0.999	GCA_016861285.1_01271
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1265027	1265320	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	9197	9490	GCA_016861285_1_1_1195	GCA_016861285_1_1_1195	-	1852308	.	.	hypothetical protein	MKPSDDYYYQLDAAYQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELHDRMNDYDPD*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0011	shell	direct	high	293	0.997	GCA_016861285.1_01272
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1265317	1265661	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	9487	9831	GCA_016861285_1_1_1196	GCA_016861285_1_1_1196	-	1852308	.	.	hypothetical protein	MKHSKAPLRQEKQSFTHFMNGSEKWLNRICYFLAALIIALIVGGISLHANAHPTDWHDNELSQQIQAETQCELKGGIYENGVCLPPNLTLTAEKELQAYTAQKQAEINRTWSKQ*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0012	shell	direct	high	344	0.997	GCA_016861285.1_01273
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1265749	1266378	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	9919	10548	GCA_016861285_1_1_1197	GCA_016861285_1_1_1197	-	1852308	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MSNLTILKTSIRSYENLFSLNDLHIASGGLEKHRPSLFARNEQTKELIKEIENDRSTKTIFALKTIRGGSDISKQGTWACEELVLSYAMWISPKFHLIVLRAFLAMHRNQPQQLALPEPEKKFTFEFTEYELEQLVWLWCGHKQMNTLLGDMIKPLETIGSYFTGMVISHHQEYRRQYKNTLPTIQRLIQPFKASNRMNWERAKNLIAQ*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0013	cloud	direct	high	629	0.998	GCA_016861285.1_01274
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1266649	1266951	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	10819	11121	GCA_016861285_1_1_1198	GCA_016861285_1_1_1198	-	1852308	.	.	hypothetical protein	METSETSASQQKKGNSFELMLFGWLCYIGAVVSIGYGLSKIMMYKNFGPDLSSLNVNAYVGGDGYNYIINGTYATTFCALAAALAIIGSTCFIVNAINKK*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0014	cloud	direct	high	302	0.997	GCA_016861285.1_01275
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1267227	1267448	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	11397	11618	GCA_016861285_1_1_1199	GCA_016861285_1_1_1199	+	1852308	.	.	hypothetical protein	MNKAKADTLALLLARDIAKTSSSSTALPFTYLNRNSAESIADFVEMLSKRFEALDDSISLPHILNAYKNQSDK*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0015	cloud	direct	high	221	0.995	GCA_016861285.1_01276
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1267417	1267692	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	11587	11862	GCA_016861285_1_1_1200	GCA_016861285_1_1_1200	-	1852308	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMVTIKQTRLKMEEKQENSLSDNDKELIKQAVLESAAKNTNFPPDKLAKSICDAIYLIDSYKH*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0016	shell	direct	moderate	159	0.576	GCA_016861285.1_01277
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1267981	1268505	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	12151	12675	GCA_016861285_1_1_1201	GCA_016861285_1_1_1201	+	1852308	.	PF14163.6	Super-infection exclusion protein B	MEEYAKLLNTILTKVVFTHMTMFFVFLFSSFYFMPPELAADMDAKTPIFFPNWFPLSALGSIIFTLLSTGAWILLCNGIKLAFTKFRQVSITYSESDKLIKLLSNLSELEKEILVSSCLGERIWSEDFKTKVAIEKLISLNLISHSWVYNCYEVNTLIKPFIISELDKLTKTHH*	hhsuite_tools	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0017	cloud	direct	high	524	0.998	GCA_016861285.1_01278
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1268831	1268998	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	13001	13168	GCA_016861285_1_1_1202	GCA_016861285_1_1_1202	+	1852308	.	.	hypothetical protein	MKKEFKKWLISLNCEGINSLGINEIVSRVDEELRIVRANEQERIVLEELIAEFKC*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0018	shell	direct	high	167	0.994	GCA_016861285.1_01279
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1269032	1269394	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	13202	13564	GCA_016861285_1_1_1203	GCA_016861285_1_1_1203	-	1852308	.	PF18726.1	SAV_6107-like HEPN	MIKANDIYNRAKQLAESTNETEQRECIKTLYYAVLHKIQEVCDSKELPRTRAINLGSHESMIERINVQNLPSEKQIVSYAKKMKKKRVDADYILSLNINSKDVQYQILWAEKCWHLLDKQ*	hhsuite_tools	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0019	cloud	direct	high	362	0.997	GCA_016861285.1_01280
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1269394	1270173	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	13564	14343	GCA_016861285_1_1_1204	GCA_016861285_1_1_1204	-	1852308	.	.	hypothetical protein	MVGAIALTKFNEISSEVVNFRNKSFDGNYIDKVQAFAFIDELKPLTKTKDKALAFSLLGTLYCLLGDLNNMEFNYRTALKFSPRDIRIRFNYAIDLYYSYRPIAALIQAQEMLNLNVKDIEILYSIYLLLDNLIKINECEKVMQMIEKLPAKQTQDYFTWINNKKSLLRAYHDLKIDLPLLSKLIDSIQSDLSPQHPKSVYVEHYYDYDDKTIVYSFIDEKSDVDSAFKFDEQLTDYIIEFERKNNVHFHNFVMMYEAR*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0020	cloud	direct	high	779	0.999	GCA_016861285.1_01281
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1270250	1270906	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	14420	15076	GCA_016861285_1_1_1205	GCA_016861285_1_1_1205	-	1852308	.	pfam00717	Peptidase S24-like. 	MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEVLAFDSNISQIKESICRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVAAINGNNEATFKQYKELGTRTPEGIPHFELVPLNPMFPTLSSLDQEIRIIGVARERVEAL*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0021	shell	direct	high	656	0.998	GCA_016861285.1_01282
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1271037	1271243	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	15207	15413	GCA_016861285_1_1_1206	GCA_016861285_1_1_1206	+	1852308	.	cd00093	Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	MNNLSQIRGQLGITQRQLANHIGWSQPRIANYETGLRSPSLSVAQKIVQTLNSLGAKVCIEDVFPSQS*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0022	shell	direct	high	206	0.995	GCA_016861285.1_01283
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1271292	1271732	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	15462	15902	GCA_016861285_1_1_1207	GCA_016861285_1_1_1207	+	1852308	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MEMKKVIIEMIDRIPGGRSAVAGFLGFSEAEMNNRLYHTKGQHFKNEELIALQLEYGCTDFIDELCRLAGGRFVPDVAEDELDKVELANLQLHELSARGLLFAVLEKALEDGEITSQEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0023	shell	direct	high	440	0.998	GCA_016861285.1_01284
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1271800	1272030	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	15970	16200	GCA_016861285_1_1_1208	GCA_016861285_1_1_1208	+	1852308	.	PF14090.6	Helix-turn-helix domain	MENINPNEKTSQTQNGKILKALLNGERLTQLDAYTRFNCTRLGARIYDIKQLGHKIEKQMVVVASGKRVAEYRLVV*	hhsuite_tools	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0024	cloud	direct	high	230	0.996	GCA_016861285.1_01285
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1272032	1272190	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	16202	16360	GCA_016861285_1_1_1209	GCA_016861285_1_1_1209	+	1852308	.	.	hypothetical protein	MERLFDHEFVASLSDREKFIAYEGIKQQLIEQGASQEEYDRVTEQAIEELGI*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0025	cloud	direct	high	158	0.994	GCA_016861285.1_01286
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1272187	1272966	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	16357	17136	GCA_016861285_1_1_1210	GCA_016861285_1_1_1210	+	1852308	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCEVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMSKRSAISHIDDLIKMGFVTKKARKNKDGSSANLYLLHLEQGSEKSALGGENISLGSEKSALGGSEKSAPITSHSFNLSINRVSDDENSANAERTDENKKTSKREKISVDYQGVMDAWNKVFNGSPIHLLKTLSQERQKAILKVAKAMLETPDVESCSVEVFTGYFQDFLSQANSRANKFFFGGPNGDGWVAKFDYIMKPKTFLNTWENSL*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0026	cloud	direct	high	779	0.999	GCA_016861285.1_01287
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1272963	1274336	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	17133	18506	GCA_016861285_1_1_1211	GCA_016861285_1_1_1211	+	1852308	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MSNSMYEIEYGLISSMLAAGLTPQAREVMSWLEPEMFATFQLGALYGNIRKQARKDDLIDILLLAQDYGENFANLAELASGYAYSGNILGYAKKVHSAWVNRTAQQALLKMAGELANAKEEQVNQITQNALNQIQKLLVSKTEIKPIAMGELVDSYVDVLEKRSKSDFKERLLYTGIEAVDNILGGINSTDIVIVAGRPGTGKTEFSLTVTRNIAKNHGSVLFFSLEMGNFQLVDRLLSATGGVSVKKLRNPAELDEGDYHRLTSALKEVRSQDVYFVDRGGLSADEICAITENHISEKGSPSVVVIDYLGLMNHKQERGVNLTQAVANSMSKLKAFTKNFNIPIILLCQLNRDVDSRAVKRPANSDLRDSGSIEQDASQIIMLYREGAYKADCDNPYSEAIVTKNRFGGLGTAYMKFDRGHFLDCDQAQAYQFINEKPQQQAKTYAAKSYGKGALQ*	rep_hall_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0027	shell	direct	high	1373	0.999	GCA_016861285.1_01288
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1274333	1274557	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	18503	18727	GCA_016861285_1_1_1212	GCA_016861285_1_1_1212	+	1852308	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKDSVVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0028	shell	direct	high	224	0.996	GCA_016861285.1_01289
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1274554	1275477	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	18724	19647	GCA_016861285_1_1_1213	GCA_016861285_1_1_1213	+	1852308	.	PFAM:PF02384.15	DNA-methyltransferase	MSFEEHNNRKKANKFAEYITGESLRRYLAGKVEKYLGKNPSVFDGAAGSGQLEQFIQPSKFIAVEIQAESCAALANNYPDAEIHNTSFFLYQSEPKSDCVVMNPPFSLKFKELAEEEKAAIQADFPWKKSGVLDDVFMLKGLANAHRFGFFIMFPGIAYRNTEKTLREVIGNQLVELNLIQNAFEDTPISVLFLVVDKTKSDNKTYRELYDCSTNKIINADEWLINSDKWDTVSPPEPPKEKVDPMKLELMSQAQLKEQVRTQVQFSRLVFDLEGWPREEFEKFCDEVCALIQEEKKSNRFLFGWGE*	phrogs_hmm	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0029	shell	direct	high	923	0.999	GCA_016861285.1_01290
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1275482	1275901	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	19652	20071	GCA_016861285_1_1_1214	GCA_016861285_1_1_1214	+	1852308	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0030	shell	direct	high	419	0.998	GCA_016861285.1_01291
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1275898	1275990	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	20068	20160	GCA_016861285_1_1_1215	GCA_016861285_1_1_1215	+	1852308	.	.	hypothetical protein	MKRLNDDEILELKIVLFIVAVWGMFNMVVS*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0031	shell	direct	moderate	92	0.989	GCA_016861285.1_01292
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1275990	1276532	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	20160	20702	GCA_016861285_1_1_1216	GCA_016861285_1_1_1216	+	1852308	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFIKTLSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKDQPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLINKIGADKVAWLERQDHEPKKYTIEDCKAMIKYYKAKIKELT*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0032	shell	direct	high	542	0.998	GCA_016861285.1_01293
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1276529	1276900	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	20699	21070	GCA_016861285_1_1_1217	GCA_016861285_1_1_1217	+	1852308	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIREVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFSRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0033	shell	direct	high	371	0.997	GCA_016861285.1_01294
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1277000	1277182	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	21170	21352	GCA_016861285_1_1_1218	GCA_016861285_1_1_1218	+	1852308	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MHSGDLIKELKANGCYFVRHGKGDHQIWFSPKTGKRFPVPHPKQDLAIGTLKSIKKSAGL*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0034	shell	direct	high	182	0.995	GCA_016861285.1_01295
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1277214	1277663	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	21384	21833	GCA_016861285_1_1_1219	GCA_016861285_1_1_1219	+	1852308	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MIFTVGVETPENENQSYGMIVPALCQLDYGCFSAADDVDDLLPMVTEAITMMLEAMVEDGFDLTTLKDKGVTHYKADPEYADFDTWLLVDVDISEYLGKKQRINVSLPEYLLTRIDRRVAAMGNYYKDRSHFLANAAHRELHAHSDKEM*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0035	shell	direct	high	449	0.998	GCA_016861285.1_01296
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1277962	1278591	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	22132	22761	GCA_016861285_1_1_1220	GCA_016861285_1_1_1220	+	1852308	.	PFAM:PF04383.12	KilA-protein	MTNLTILKTSIRQSDNLYSLNDLHVASGSENRHKPSLFMTNQQTKDLIAEIDNSSVAGNPASVKIVRGGRNPELQGTWVCEELVLSYAMWISPKFHLIVLRAFLAMHRNQPQQLALPEPEKKYTFEFTEYELEQLVWLWCGHKQMNTLLGDMIKPLETIGSYFTGMVISHHQEYRRQYKNTLPTIQKLIAPFKASNQINWERAKNLIAQ*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0036	cloud	direct	high	629	0.998	GCA_016861285.1_01298
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1278821	1279120	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	22991	23290	GCA_016861285_1_1_1221	GCA_016861285_1_1_1221	+	1852308	.	.	hypothetical protein	MYYIAVLAHSKRKKEFYSPDRKRSGLFCWWNMNITLGDTIKIDGEEVPEYLLKALYECLKNKYAFLANNSICSDVIQAERLSVNGLKIPLDAITYPWNK*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0037	cloud	direct	high	299	0.997	GCA_016861285.1_01300
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1279098	1279577	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	23268	23747	GCA_016861285_1_1_1222	GCA_016861285_1_1_1222	-	1852308	.	.	hypothetical protein	MNKARISRQQILNNIPEQYRHYFNIVILDIAQDIYPLFKNFTDAVNILCKHAQINKKVDIFFTSSKSNGIVSSDCLTLQYQIHPEAVHVYYNGCIFYDLAKANLYPREIQIAAFLEELAHTYMNISDEILVKKVVAWMYEGIHYNENTEQYEPIYSKDK*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0038	cloud	direct	high	479	0.998	GCA_016861285.1_01301
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1279658	1280041	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	23828	24211	GCA_016861285_1_1_1223	GCA_016861285_1_1_1223	+	1852308	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPKKLGGNMPIKEPDVWALIWSWLQINLSSSSIQSALWALFISILRLGFMRKKPSFRYVFIDAAMCASIAGVAVPICTHIFGHSEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDVQ*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0039	shell	direct	moderate	359	0.935	GCA_016861285.1_01302
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1280007	1280609	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	24177	24779	GCA_016861285_1_1_1224	GCA_016861285_1_1_1224	+	1852308	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISEQIEKAGCVTKMQQAMFLAQCGHESGGFTRFKENLNYSWSGLSQTFRKYFPDPLTAKRYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDIASNLDLSVKAAVWYWKLCELADLNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0040	shell	direct	high	602	0.998	GCA_016861285.1_01303
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1280602	1280925	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	24772	25095	GCA_016861285_1_1_1225	GCA_016861285_1_1_1225	+	1852308	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGVVVVVLFGALCYQSSVIDELNITTKQQAQTIQQQEDANKALTIALQQERDAVIEQQERNDEIERIATEHAESVKTIIKTQPCAHTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0041	shell	direct	high	323	0.997	GCA_016861285.1_01304
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1281429	1281890	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	25599	26060	GCA_016861285_1_1_1226	GCA_016861285_1_1_1226	+	1852308	.	PFAM:PF07278.10	terminase-small-subunit	MKDYYSISKMAAIAGCDRRTMSAIVGHVKPEKETTNFKGYSFEQILKLLIEGTRPKNVDELSPSDQLAYWNAQLKQLEYKKRRGEVCEVEDASRQMSIIVKTMLQPQETLADRAEVAGMPINWVIWIQKEVDKNRDESADLILEDETDVCESE*	phrogs_hmm	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0042	cloud	direct	high	461	0.998	GCA_016861285.1_01305
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1281871	1283991	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	26041	28161	GCA_016861285_1_1_1227	GCA_016861285_1_1_1227	+	1852308	.	CDD:COG5525	Large-Terminase	MYAKASDIRKDLAEMIKAPNRMKVSEAVSQYMRVPLGGGSFVRWDKDRTPYVIEPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGIIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREETEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNADGESLQIDPSAYPEDWDLLISDVLNKQYRIEGLEGGFMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGLSKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETVGANYIHFPAWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPKEETESAVEIEQVKPQPKPKTKSNWLNGGGSKKGGWL*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0043	shell	direct	high	2120	1.0	GCA_016861285.1_01306
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1284115	1284633	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	28285	28803	GCA_016861285_1_1_1228	GCA_016861285_1_1_1228	+	1852308	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MQLTNPENFKQFVQNKEAKTITTSETVAKVFGKYHKHVMRDIREILEAGDDEFNRTNFGLVEYIDKKGEKRPMFEMTKDGFMLLVMGYKTKKAMAIKIAYIKAFNFMQDQLLSSNMTLLEQYYQALGEHKAEKQLASVCGKALNEWKGKKPLLEATLKIFEDKLQIELPLLD*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0044	cloud	direct	high	518	0.998	GCA_016861285.1_01307
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1284648	1284893	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	28818	29063	GCA_016861285_1_1_1229	GCA_016861285_1_1_1229	+	1852308	.	.	hypothetical protein	MRFFIGAKMAIYDRDELEEKIRTLDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0045	.	unmatched_CDS	none	0	0	.
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1284991	1286397	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	29161	30567	GCA_016861285_1_1_1230	GCA_016861285_1_1_1230	+	1852308	.	CDD:COG5511	Major-Capsid-protein	MPNRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPLNLSGDVDEDLAEQIRKKWAEWSVRPEVTGQFTHPELERMLLRTWLRDGEVFIQLVRGSVAGLTHSTDIAFSLEALEPDFVPMNTLDTANVIQGIEINAWRRPVSYRVYMDNPQENNRTFGRVKTVPAENMLHLAFKKRLHQLRGVSMLHGVIVRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNENYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNTNLEHFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIEVPVDIDPASLYNAVYSGPVMPWIDPIKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRKVEVDENRELGLNFDTDLTNTPLNERASPLKDGENLDE*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0046	shell	direct	high	1406	0.999	GCA_016861285.1_01308
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1286471	1286617	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	30641	30787	GCA_016861285_1_1_1231	GCA_016861285_1_1_1231	+	1852308	.	.	hypothetical protein	MSILKTILSIIKEFRRMNEQLSSLRFWGLWLLGFLIASAIFINAIKWW*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0047	cloud	direct	high	146	0.993	GCA_016861285.1_01309
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1286608	1288596	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	30778	32766	GCA_016861285_1_1_1232	GCA_016861285_1_1_1232	+	1852308	.	PDB:6WKK_D	Major-Capsid-Protein	MVVTMKWYNINAKSTDTADISIYDEIGGWGISAQQFAKDFKALGNNLKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTEPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLVDRGISVSGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDASHKNSFDNAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0048	shell	direct	high	1976	0.993	GCA_016861285.1_01310
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1288675	1289004	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	32845	33174	GCA_016861285_1_1_1233	GCA_016861285_1_1_1233	+	1852308	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTAAAAAAVKSGDVVMLENLVAIAVADVEKSAVGVGLTTGVFTVKAKAADDIKQGAIVYWSATDGATTTAGTNKRLGIAWHASGATVETVDVKINA*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0049	shell	direct	high	329	0.997	GCA_016861285.1_01311
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1288985	1289296	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	33155	33466	GCA_016861285_1_1_1234	GCA_016861285_1_1_1234	+	1852308	.	pfam13856	ATP-binding sugar transporter from pro-phage. Members of this short family are putative ATP-binding sugar transporter-like protein.	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDESPKLMSGNYTDDYLINGTTRTLTLFKASGYKPKLGDIIISSTEEYVVRGFSFEDGKIVLQLE*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0050	shell	direct	high	311	0.997	GCA_016861285.1_01312
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1289299	1289829	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	33469	33999	GCA_016861285_1_1_1235	GCA_016861285_1_1_1235	+	1852308	.	PFAM:PF06763.10	minor-tail-protein	MAVKIEGMAALQANIQKLANQVAPKAAAKAINKVARSAIKNGTKNVSKEIHVPAKLIRKRTRLSQKATANRPVAKIRVDRRNLPLIRLLENPRRTMRASKGQIRIGKYQIQRGFIQTLANGRKHVMQRQGKERYSIDVVKIPLSRPLTTAFHNELKDYSSQIKVELTRELSDILKK*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0051	shell	direct	high	530	0.998	GCA_016861285.1_01313
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1289838	1290248	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	34008	34418	GCA_016861285_1_1_1236	GCA_016861285_1_1_1236	+	1852308	.	PFAM:PF06141.10	Minor-tail-protein	MLIHKKIRHQVSDMLKSSIKGVENIYSGRPLFIDIDQEKTAIAVFLDEISCEEVDLCHHEYTAALNIAIYLKTALGDDALDDIADKIKERLSVAISNDELSENISEMTLISYEYEQDTTNRTWFVSNLKYQIKYED*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0052	shell	direct	high	410	0.998	GCA_016861285.1_01314
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1290251	1290901	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	34421	35071	GCA_016861285_1_1_1237	GCA_016861285_1_1_1237	+	1852308	.	PFAM:PF08813.10	Tail-tube-protein	MPTQTTPFQGTKFYLGTGLTEGKAVTAVTVKPNATITSAGHGAKVGDFIKLTGLGSLDGYYPVKSVTNEKITLADEVDWSNQDAPTSFTTAKVATVKWSSNFCAIKNIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATPMQQDLRKKFYGKETFPWMMVLKNNQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPA*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0053	shell	direct	high	650	0.998	GCA_016861285.1_01315
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1291060	1291176	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	35230	35346	GCA_016861285_1_1_1238	GCA_016861285_1_1_1238	+	1852308	.	.	hypothetical protein	MQYGLWETTLAYLVLGVCFIIAWRLPNIINSIKNKGDK*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0054	shell	direct	high	117	1.0	GCA_016861285.1_01316
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1291176	1291583	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	35346	35753	GCA_016861285_1_1_1239	GCA_016861285_1_1_1239	+	1852308	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANKPKITPIIINGENYYIREFTVGEMNQALYGQQQELIRIAEEQGITLAFNDEITLTEQLAKIYDPNRLTRTLVMRLCDQDGKNLFDMDNPDDLTALSKLDKVVFEQLTQAIVEDEPKNSQAEESSK*	phrogs_hmm	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0055	shell	direct	high	407	0.998	GCA_016861285.1_01317
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1291628	1291852	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	35798	36022	GCA_016861285_1_1_1240	GCA_016861285_1_1_1240	+	1852308	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPERHLQEYEMFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKPPELSDFMPFYQEKMDDEDDDGVADYLANR*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0056	shell	direct	high	224	0.996	GCA_016861285.1_01318
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1291921	1292304	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	36091	36474	GCA_016861285_1_1_1241	GCA_016861285_1_1_1241	+	1852308	.	PFAM:PF15781.4	toxin	MKQEWEVILQDPLLNWLETLAEDDVLKIYAALELLSTEGPQLSRPYADTLQGSKYTNLKELRVQSKLSVFRLFYIFDPVRQAIVLCGGDKKGKKEKLFYKEMIALAEQTYDDYLSELTKEQENEREI*	phrogs_hmm	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0057	shell	direct	high	383	0.997	GCA_016861285.1_01319
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1292288	1292590	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	36458	36760	GCA_016861285_1_1_1242	GCA_016861285_1_1_1242	+	1852308	.	pfam13744	Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	MSVKFKDLMNNLPAEKQAKVKAMADDMRMELQLYRIREELELSQKQMAEALSISQPSVVALEKRGNDIKLSSVKRYIEAMGGVLNLSVELPTGKTVTFNL*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0058	shell	direct	high	302	0.997	GCA_016861285.1_01320
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1292603	1292842	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	36773	37012	GCA_016861285_1_1_1243	GCA_016861285_1_1_1243	+	1852308	.	.	hypothetical protein	MLRDFIQFTAKCFFILLIALGTLFLLFAVDFIYILAFIGVYVAIFATCLVVAIIKENNRIKKLRIVEQDKNRVKYVIIN*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0059	shell	direct	high	239	0.996	GCA_016861285.1_01321
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1292894	1294822	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	37064	38992	GCA_016861285_1_1_1244	GCA_016861285_1_1_1244	+	1852308	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTSRTFWAGIVSSGGSYLSSGISDVIKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASASAAEAALTQFGQALASGVFRGDEFNSVMEQTPGLATAIAKGLGGTTGELRIMAGEGKLTAKVLIEALEKARDSVDKDFSKRVLSLGDAFTNLQTAAIKTTGQLDQSLGITTKLAQGVDFLSQHLEGAASAATILLTSLSVSKLSQFTIEKSKATIATAKHTNELYKEAQAVYSQTQALRVQAQADIERLHAELQLAQSEKTRFALRERLNAQSQRVIALVRQEADAKRQLAVATSLAGQALNGLKGIMALLGGPIGVITLAAGALFYFGQQAKEARAAALDMTDVNNQLAESYDKLSEAALSLKITEQLDKIKDQYKKIEKLQDEMSTRQIGTDFDGFQVGGGLDEKEVDEFLNKISFAQEKAEKMKQVFDKMLSSMGQSFLRSGKNVEELKEKFRLLGIDGETADRVIAGLQNNLGKVGESAEEAADKTLDLSEAMKKLNDKSTTLARLSAAAWSICSILTR*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0060	cloud	direct	high	1928	0.999	GCA_016861285.1_01322
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1294792	1295166	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	38962	39336	GCA_016861285_1_1_1245	GCA_016861285_1_1_1245	+	1852308	.	PFAM:PF05100.11	minor-tail-protein-	MVYMQYLDAVNFAGGNKQADPTQEALSLFVIEQVATHKRDVISFTLALPMETDNAYISCRTITTICSWLYRGVECGYNGAAVADEKDQPTNDPKKDKCSGLVSGCALRNNVVNFGGFPSVDKLG*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0061	cloud	ambiguous	low	32	0.085	GCA_016861285.1_01322
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1295169	1295918	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	39339	40088	GCA_016861285_1_1_1246	GCA_016861285_1_1_1246	+	1852308	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MNEELKKSILKIAKELEPREMCGFVIFAGCELEFINCENIADDPENFFEVSPDDFLSAGMKGNIVALVHSHPGGEPVLSPADFQMQQNTELDWWLVCDGVIHVFPWVPPLLGREFIHGQTDCYTLFRDFYRLSGKEFPNFERDDYWWEDGFNLYMDHMEEQGFERLTDVKELQVGDVILIQVGSDVPNHAAIYIGDQMVLHHSPRRLSKRDLYDGYWLKHTHSLWRFKNWSQLNFTAALNNLEVNLSSM*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0062	cloud	direct	moderate	689	0.919	GCA_016861285.1_01323
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1296020	1296469	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	40190	40639	GCA_016861285_1_1_1247	GCA_016861285_1_1_1247	+	1852308	.	PFAM:PF06805.11	tail-assembly-protein-I	MDNRYIERDVGYQLKDGTTVHITPVVAGAKKAGLFQTIAGAVLAVVGYTLGWTGIGAVVGNMGVALMLGGVAQMMTKTPTMQGQGKEAEKQKSTSFTNLSNMAAQGRPVPLAYGKIRTGSLIISQGVETYDVETAKTSEKPVGFRKGRM*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0063	cloud	direct	high	449	0.998	GCA_016861285.1_01324
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1296526	1301421	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	40696	45591	GCA_016861285_1_1_1248	GCA_016861285_1_1_1248	+	1852308	.	PFAM:PF13550.5	tail-protein	MGGGGGGGGHTPYEAPEFGRSKQAVRIVEIVSEGEVKGLVNGVQSVFLDNTPIQNKDGTYNFSNVEAEGRIGIQDQDILEGFNTSEKEISVGTQVRKNTPLTRTVSDGKVSRLRLTLGVQSLFSQNDQGDTHGASVTMNITIGQRVIPLTINGKYSSQYLRQIEIDNLPPTPFTVRVERIDEDSKSQRLQNNTIWASYTEIIEMRLAYPNTALVGIKFDSDYFSSIPNRTYDVYGIIVQVPSNYNPETRAYNGTWDGTFKTAWSDNPAWVLYDLLKNKRYGFGRRLGDFAVDKWALYNVAQYCDQLVDDGFGGKEPRFTCNAWITEQRQAYDVINDICSIFRAMPVWNGREFTVIQDRPADPVWTYTNANVDKEGFTYSYSAMKARHNEIHVEYANAQNNYEKDVICVSDDDLIRRYGLNVKKVTAFGCTSRGQAYRTGRWILETEKLETRTVTFTVGAEGLMHVPGDIILVADNDYAGTQLGGRVLSVANKVVTLDREVPFKSGEQFLYYNQDAQVTGIKVIDVLDGNRIVLDKAPTGLTEYGVWLRHGEKVQPQLYRALSIKEESKGKYTITALQHEPQKEAIVDSGAHFEPVSFSEVPDRYRIQNVDVAATDDGIRLSFEYFAKNESTVKYQIKLYRTFDGNRTLYKVYDDLTNTNISFTGLPDGDYTAEIRAKNGVGQLSEPVTKSFSVNFTIAELVTVSKLMGIDLNWRNPIFANTNAAIEIWVSKDNNFANARKLITLAYPTNSYSYTGLGAAETYYFWARMVSKDVAGKFTDAVEGVTERDATKIVDYIHGQINKSALSQELVKELTNTAETARTAIAGITSETQARIATLNAEANNRAKAIREEGLKLTQKIEAESRKATVALQEEVKARGTAINKLEQADKQQAKAIEQVTAKANSALSGIEVERKARAAADNAESKAREILTAKIGQHESSINQINQTIVRDRETSAQQVATLESAVRNIRVGGRNYLLDSSFKNGKWYKSQGSGSKATIDVDNGVLTISSDNATWKQYQIKGYAHKGGLNELVDSTTVTISFEVMTPDDNTGGGIKYWMNLRADRIDNTHGGSTNPIVINQTAAPSKWSRVSITGVATQPTNFRGWRFLLGVSTPGTVKFRNPKLEVGNVATDWTPAPEDLDQSELINAKFVDIRQVVTSETEARTVWQNNAISRINGVESNIANIQRSVTTATQSISEVNQHLNAKIDGISVGGRNLLLGTAIGLSGNGAKNYQNKTYNVTSNIDVSTLKTITLSCSVLTKGIKAGSGIRHFRAGAEVQLFYADGTNGWLSAYCNDVADFNGRISKTLTLSKPLSKLTYNKVQVRNIAEGEYKVDGIKLEVGNVATDWTPAPEDLEGAVGDLSADLNHYKSSQATKDQATSMQLTTLTARMTNAESGISKVEKAVSDAKSSTATQLNQLSAAFSKAKTDLDAKIAEEKTARSNADTAEAKKTSALTSRVANAESSVTQLSKTVADVSGKLSGTHTIKTQVVAGGRTAIAGIALGASSDGKTAESSVIVMADKFGVVKSATDGTVKNVFTVSNNQLALSGDLLADGSIIGRHIQANQEIRSPLISGGEIDISGNDGILRVGRTGNFLVRASSQNRGLVINNDQIIVYDDRGNVRVKIGRL*	hallmark_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0064	cloud	direct	high	4895	1.0	GCA_016861285.1_01325
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1301418	1301837	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	45588	46007	GCA_016861285_1_1_1249	GCA_016861285_1_1_1249	+	1852308	.	.	hypothetical protein	MIFIMLAIIAMAVMLWLFFLKRGKAKVPSQGIQTFDNVGNATFSTENRLFRYIGYRDLPIGNFSISVNTDGQVVFIPIILTSNNQELSHRVAISVDIPYISNGRISGNNFTGTVKSPMDFRYKGNLRTKPLIRIFYGVY*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0065	cloud	direct	high	419	0.998	GCA_016861285.1_01326
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1301837	1302433	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	46007	46603	GCA_016861285_1_1_1250	GCA_016861285_1_1_1250	+	1852308	.	.	hypothetical protein	MFGFAGFTDVNDGFLSMSLQRRGNAIFNGNLAEISVADNDIVVISGCNGDVAQLKKVGGKIILYSPNAKYIDYMIFNTSTAKSSGYGVETYDSNGRVIFSSNHKFLRPIKGIDTNLNKGAFTETQPSGSKYGVILSNYGFTLNINPDFCRRVMRSVRLDGNIKFNVVNYDDRGAGRIGMSYNDNSYFFNAIIVDITNY*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0066	cloud	direct	high	596	0.998	GCA_016861285.1_01327
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1302444	1302782	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	46614	46952	GCA_016861285_1_1_1251	GCA_016861285_1_1_1251	+	1852308	.	.	hypothetical protein	MKYIDKKIEESRTGASASYHVVSGLQTEYTSGNTFVTISSYVSKDKKEEGKESLSVNTFTIPGVPDWDAIPYEWALSELVKTQPEDFAPENYHGYINPYIFAGGKIKDLEVK*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0067	cloud	direct	high	338	0.997	GCA_016861285.1_01328
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1303128	1303445	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	47298	47615	GCA_016861285_1_1_1252	GCA_016861285_1_1_1252	+	1852308	.	PDB:1Z19_B	Integrase	MATIIKNGKRWHAQVRKFGVSKSATFLTQADAKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKHGKREERIRLLRLSRTPIAAISLQEIGKAHFREW*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0068	shell	direct	high	317	0.997	GCA_016861285.1_01329
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1303482	1303715	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	47652	47885	GCA_016861285_1_1_1253	GCA_016861285_1_1_1253	+	1852308	.	.	hypothetical protein	MRERSSLSALMAKTIEWDFITENPLKYLEKPKAPAPRTRRYNEHEIERLIFVSGYDVEHIEPPKTLQNCTGLHFFLL*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0069	shell	direct	high	233	0.996	GCA_016861285.1_01330
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1303724	1303894	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	47894	48064	GCA_016861285_1_1_1254	GCA_016861285_1_1_1254	+	1852308	.	PDB:1Z19_B	Integrase	MRAGEIASLTWNNINFEKRTAFLPITKNGHSSTAPLSVKAIEILQHLTSVKTESDP*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0070	shell	direct	high	170	0.994	GCA_016861285.1_01331
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1303904	1304119	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	48074	48289	GCA_016861285_1_1_1255	GCA_016861285_1_1_1255	+	1852308	.	.	hypothetical protein	MEARQLDHNFRKLKKMEGLENANLHFHDTRRERLAEKVDVMVLAKISGHRDLSILQNTYYAPDMAEIAQRL*	.	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0071	shell	direct	high	215	0.995	GCA_016861285.1_01332
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1304166	1304933	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	48336	49103	GCA_016861285_1_1_1256	GCA_016861285_1_1_1256	-	1852308	.	PDB:4U7B_B	Mos-transposase	MARSVFFYHLKTKNDKNAALSQEIASIYHDNHGNYGYRRVTFKLRETIKINHKKVQRIMQWLGLKGKCKTQKYRSYQGEVGHIADNLLQRDFTATQPNEKWTTYITEFKCAEGKLYLSPIKDLFNNEIIAYDLARSPNFEQITRMMKQAVARLEGAKPILHSDQGWQYQMIGYQNILRENGIQQSMSRKGNCLDNSAMESFFGRLKTECYYGKRFETFEQLEKTIHEYIHYYNHERIQGKLKGLSPVNYRTQSLN*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0072	shell	direct	high	767	0.999	GCA_016861285.1_01333
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1304984	1305493	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	49154	49663	GCA_016861285_1_1_1257	GCA_016861285_1_1_1257	-	1852308	.	PDB:4U7B_B	Mos-transposase	MTKYNFLFKQQVIEFYLQNGKNSSLTRRHFQLAETTLERWINQFNHSGINGLALLGKKRNYSPEFKLNVIQAVKNGKFSAEAACLHFGIANSGIVSQWLQAFEKQGINGLIPKPKGRPTMKLQYPKMPPKPKTREEELELENLRLRAENAILKKLQELNQQKMQKKPLS*	common_virus_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0073	shell	direct	high	509	0.998	GCA_016861285.1_01334
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1305585	1305743	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	49755	49913	GCA_016861285_1_1_1258	GCA_016861285_1_1_1258	-	1852308	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MADLQQLIKNIEQWAEDRNLIEGSTPQKQFIKLMEEFGELCSGVAKFILFET*	phrogs_hmm	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0074	shell	direct	high	158	0.994	GCA_016861285.1_01335
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1305798	1306268	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	49968	50438	GCA_016861285_1_1_1259	GCA_016861285_1_1_1259	-	1852308	.	PFAM:PF05840.12	nicking-at-origin-of-replication	MTKRCDQPICIEYEECEPNKYGEIRKKIVGVKNRFTEKKIITKLKNWVIKSAKSALGSTALNSESTETNKAHRAAWTCVNNCNRSKIEQQANLLMLPIGSPLKPSQIDLLMRHGRLRLNDYRWICCENDEVFIKEEKIPLAQAFGWGESLGDFRVN*	phrogs_hmm	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0075	shell	direct	high	470	0.998	GCA_016861285.1_01336
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1306307	1306516	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	50477	50686	GCA_016861285_1_1_1260	GCA_016861285_1_1_1260	+	1852308	.	pfam06074	Protein of unknown function (DUF935). This family consists of several bacterial proteins of unknown function as well as the Bacteriophage Mu gp29 protein.	MPYLQINVDPNIAPHRIPYFEFDTKEYEDLSVFADAIPKLTGIGVQISESWVRDKLGIPEPQEGSAKEI*	mmseqs_cdd	common_virus	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0076	shell	ambiguous	low	3	0.014	GCA_016861285.1_01337
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1306513	1307214	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	50683	51384	GCA_016861285_1_1_1261	GCA_016861285_1_1_1261	+	1852308	.	PFAM:PF06152.10	minor-head-protein-and-DNA-pilot	MKRREIDKPDDSSEFLVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYKPNLDLYPEKLAHAFAKVEMKGGEFKHDFELLAKHMAEMKQTLSPEGKKLTADQMLQVRDSLTKNFKFAAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGIDEYEALPDIINAPDKIVVDELGYQFYKDVNGKKLLAVLKVLSKEPQIFVQSFRLVSDKQWRKAFKE*	phrogs_hmm	hypothetical_protein	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0077	shell	direct	high	701	0.999	GCA_016861285.1_01337
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	CDS	1307488	1308024	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	51658	52194	GCA_016861285_1_1_1262	GCA_016861285_1_1_1262	+	1852308	.	COG3101	Elongation factor P hydroxylase (EF-P beta-lysylation pathway) [Translation, ribosomal structure and biogenesis]. 	MEHKLEDIIAIFNQCFEEEYNTRLVKGGEEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKICAEKGLPKRAEMLRKALVAFYGTEDEIDLAKFDVARI*	mmseqs_cdd	nonviral_gene	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_CDS_0078	persistent	direct	high	536	0.998	GCA_016861285.1_01338
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1427465	1428484	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	1	1020	GCA_016861285_1_1_1366	GCA_016861285_1_1_1366	-	1852308	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHNFTIQCLKLAGNPVFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAINGFGTLGFGFIEVGTVTPIAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYADYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPIAVKIAPDLTESELMQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0001	persistent	direct	high	1019	0.999	GCA_016861285.1_01441
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1428715	1428921	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	1251	1457	GCA_016861285_1_1_1367	GCA_016861285_1_1_1367	-	1852308	.	.	hypothetical protein	MLTQIAQNRGVPFEILVEKVIEKSAQFAVVIGIIIGQLQAFEDRLLTFKTPEELTALEQEIEQWQFPT*	.	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0002	shell	direct	high	206	0.995	GCA_016861285.1_01442
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1428881	1429327	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	1417	1863	GCA_016861285_1_1_1368	GCA_016861285_1_1_1368	-	1852308	.	PFAM:PF14301.5	tail-protein	MTIYYKNGFFDDTDGGFVPESAVEISQETYLELLNGQSRGKQIIADKTGYPVLIDPQPSAAHVLNLDTLTWEISAEKQTALFAQQKEGLLNKLANKADQLKNGLLAGYPQTEIESFYRQEKEALAWQADNSTETPNAHTNRPKSWCAV*	phrogs_hmm	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0003	cloud	direct	high	446	0.998	GCA_016861285.1_01443
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1429400	1429741	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	1936	2277	GCA_016861285_1_1_1369	GCA_016861285_1_1_1369	+	1852308	.	COG4679	Phage-related protein  [Mobilome: prophages, transposons]. 	MHNMPFSVHILTQVRKAISKMPQSLQEKIYFDLDDLETYGNELQEPKVGDLGNGLKELRTTAKEGIARSFFFFHIGKQIFVVHAIQKKTQKTPKQDLMLAKVRMKQLKDQLKP*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0004	cloud	direct	moderate	332	0.971	GCA_016861285.1_01444
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1429752	1430042	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	2288	2578	GCA_016861285_1_1_1370	GCA_016861285_1_1_1370	+	1852308	.	PFAM:PF10078.8	transcriptional-regulator	MEKLEFISLENLKHDLIAQDPTFEIRLVVHKQQQAIVQQLKADRLAKHLTQQDIANLTGIKTQNISRLERGMVMPNADTLIRYAQALGGTFQYVPA*	phrogs_hmm	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0005	cloud	direct	high	290	0.997	GCA_016861285.1_01445
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1430095	1431327	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	2631	3863	GCA_016861285_1_1_1371	GCA_016861285_1_1_1371	-	1852308	.	pfam03406	Phage tail fibre repeat. This repeat is found in the tail fibers of phage. For example protein K. The repeats are about 40 residues long.	MKAFLHHLQNEAKLIISPIYCVVGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTVDGKVGLNGNESINGEKSFENRIVAKRNIRISDSPHYVSRGDYLNIGANNGDCWFEYKSTNREIGTLRMHANGNLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEEFRGNLNELKTDGIYAITQASRSQNLPVSTSCHIQVIAGNDGAWCRQLAYVAYSTDMYERHQTSQAEDNWSTWVKLNDIEPVRELLSTKANISHTHNPRGQSNRLLSSFHESNNVEIGLCYQSSNTQCQFTYSQNYVYISESTLHITAIGRWKGEPYQRIVTDVPTAEEVNSEANQNPSPSPRSGNRECVRRRLDGSVVEHYYRPSAGGLAKSLTYDRDRDD*	mmseqs_cdd	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0006	cloud	direct	moderate	1194	0.968	GCA_016861285.1_01446
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1431360	1431815	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	3896	4351	GCA_016861285_1_1_1372	GCA_016861285_1_1_1372	-	1852308	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MSYAYEQAPARAGEVGKHVGQFRVINVYQLRKFFGFRNSPNALGFSQKRLGGAQWYRKRDPLSDSVRLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEGCHIVDNYDMTVSISVPSASTSDFKKFAINHLDILPRQAGVQYLFNLT*	mmseqs_cdd	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0007	shell	direct	high	455	0.998	GCA_016861285.1_01448
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1431828	1432928	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	4364	5464	GCA_016861285_1_1_1373	GCA_016861285_1_1_1373	-	1852308	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSLFSDETIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDESAIKTVQENGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGSVKLADEDKTIMGKTAKILDAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGGQPTEPKEKQSKPENKKDDDVEKEELEKRLKAKDEEIQQLKDAQAKRDAEVKQAAVLADAKTAFKEVNFADNSTVREIQESAVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAEPKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0008	shell	direct	high	1100	0.999	GCA_016861285.1_01449
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1432989	1433345	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	5525	5881	GCA_016861285_1_1_1374	GCA_016861285_1_1_1374	-	1852308	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKRNWDLIRSILLKLESQSEARGSLLPDGFTGFDSETVSYHFKLLQSAGLIEAIDYSSLNEMSLIARSLTWQGHELLDKIRNDTVWNSLKTTIKSKSLDLSLDAIKQVAQTIISQMLA*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0009	cloud	direct	high	356	0.997	GCA_016861285.1_01450
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1433342	1433650	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	5878	6186	GCA_016861285_1_1_1375	GCA_016861285_1_1_1375	-	1852308	.	.	hypothetical protein	MRKEYTDDDLFKKNTARRHSGEKIKLSEYLMLWMYELLTKPVEFGMRDAVLYRIHKKFTDEIPFDDTVKEMDRLIGEAEKAESQSKSYDEIVDMLWPRDNKE*	.	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0010	cloud	direct	high	308	0.997	GCA_016861285.1_01451
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1433956	1434621	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	6492	7157	GCA_016861285_1_1_1376	GCA_016861285_1_1_1376	-	1852308	.	PFAM:PF04233.13	Minor-capsid-component	MNALTAGNIQLIKSIRAQYLDKVQNAVMQAMVRGSLNKDLAAQIKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYSNPPADTGHPGHDFNCRCVQIPVLDTEQEKQIIEQYEVDKVKEAISPSQYRYHVGDMEQNPVAMEFVKKYNLSTKEAVSIRDYTTNSYAKINSQLREDKAAPSILMMAKVIIMR*	hallmark_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0011	cloud	direct	high	665	0.998	GCA_016861285.1_01452
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1434618	1434902	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	7154	7438	GCA_016861285_1_1_1377	GCA_016861285_1_1_1377	-	1852308	.	PFAM:PF06152.10	minor-capsid-protein	MTDDVEIALQQPQGSFFMDDAKGFQAISAKALMKVLENYEKSDRTSQAENIANGFVSRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVN*	hallmark_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0012	shell	direct	high	284	0.996	GCA_016861285.1_01453
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1434931	1436262	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	7467	8798	GCA_016861285_1_1_1378	GCA_016861285_1_1_1378	-	1852308	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSANFGRYSEYIITGGTQSVLVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDTENEYDRKELSFGGLKDLLTEFCNAVAGAADIPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNADELARNFEEPEGESTQVQASEDEQENGALI*	hallmark_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0013	shell	direct	high	1331	0.999	GCA_016861285.1_01454
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1436264	1436647	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	8800	9183	GCA_016861285_1_1_1379	GCA_016861285_1_1_1379	-	1852308	.	PDB:4IDH_A	Large-Terminase	MEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL*	hallmark_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0014	shell	direct	high	383	0.997	GCA_016861285.1_01455
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1436683	1437072	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	9219	9608	GCA_016861285_1_1_1380	GCA_016861285_1_1_1380	-	1852308	.	PDB:5OE8_A	Large-Terminase	MLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRE*	hallmark_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0015	shell	direct	high	389	0.997	GCA_016861285.1_01456
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1437136	1437342	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	9672	9878	GCA_016861285_1_1_1381	GCA_016861285_1_1_1381	+	1852308	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MIELALLNDYSALRAWREHLGLTQAEVAGRLGISQAAYSQHENSQTLRKSTRIKIATALGINPAQLDF*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1437525	1437860	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	10061	10396	GCA_016861285_1_1_1382	GCA_016861285_1_1_1382	-	1852308	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGAVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHKENHD*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0017	shell	direct	high	335	0.997	GCA_016861285.1_01457
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1437853	1438455	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	10389	10991	GCA_016861285_1_1_1383	GCA_016861285_1_1_1383	-	1852308	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISVQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0018	shell	direct	high	602	0.998	GCA_016861285.1_01458
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1438424	1438780	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	10960	11316	GCA_016861285_1_1_1384	GCA_016861285_1_1_1384	-	1852308	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKICEFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0019	shell	direct	high	356	0.997	GCA_016861285.1_01459
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1439042	1439551	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	11578	12087	GCA_016861285_1_1_1385	GCA_016861285_1_1_1385	-	1852308	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPTEPNEPICDDSTGMMISEVVGRFFLKNDRTLHYIVFSYYVNKGTINHIAVKLRENCGEIKMQPCAGKPDIRIPSLKTMIRNVEKELKLAKAIIHELLVIGFVILQTGRQNAKNIKITY*	mmseqs_cdd	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0020	shell	direct	high	509	0.998	GCA_016861285.1_01461
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1439552	1440097	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	12088	12633	GCA_016861285_1_1_1386	GCA_016861285_1_1_1386	-	1852308	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAKKAQELAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNIHKQCAPCNDHKSGNIIEYRINLVNKISADKVAWLERQDHELKKYTIEDCKAMIKHYKAKIKELEE*	common_virus_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0021	shell	direct	high	545	0.998	GCA_016861285.1_01462
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1440186	1440605	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	12722	13141	GCA_016861285_1_1_1387	GCA_016861285_1_1_1387	-	1852308	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0022	shell	direct	high	419	0.998	GCA_016861285.1_01464
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1440662	1440865	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	13198	13401	GCA_016861285_1_1_1388	GCA_016861285_1_1_1388	-	1852308	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLED*	.	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0023	shell	direct	high	203	0.995	GCA_016861285.1_01465
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1440862	1441503	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	13398	14039	GCA_016861285_1_1_1389	GCA_016861285_1_1_1389	-	1852308	.	PFAM:PF06992.10	Replication-protein-P	MNAITPTQKSAVEKSDVSDNATKLIDRMFTRLKSLFPAWKQAFDSIETYNETKQVWLEELIKADVMTPLALKRGLDRAAGSESPFFPSVGQFIAWCSEDYHELGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKLSFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0024	shell	direct	high	641	0.998	GCA_016861285.1_01466
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1441662	1442285	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	14198	14821	GCA_016861285_1_1_1390	GCA_016861285_1_1_1390	-	1852308	.	PFAM:PF04492.12	Replication-protein-O	MSRFIPNSFQIPNSFVDEYLDSLSGKAIKCYLLIARKTTGWRKDSDRISTSQFMAQCGIKDRKTAYAAIEELESVNLVNIERKQGEINEFSLNFFIDENNDFKPAPKNGISTSTKNWDSTKDNIKNNIQDNPPISPQGESATPANGKINAENIPLPDYIDRETWIAYCRMRKVKRAEIKTQDTIKRCLRDLEKLCGGSPDLARAILD*	rep_hall_hmm	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0025	cloud	direct	high	623	0.998	GCA_016861285.1_01467
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1442282	1442503	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	14818	15039	GCA_016861285_1_1_1391	GCA_016861285_1_1_1391	-	1852308	.	PFAM:PF10078.8	CII-like-regulator	MARNKLTRSARVLSDQVIEKYYKQKQYEVAEGMETTPSTLSRFISNEEFNQTFNFIAACQFGVFSRYASELML*	phrogs_hmm	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0026	shell	direct	high	221	0.995	GCA_016861285.1_01468
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1442861	1443517	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	15397	16053	GCA_016861285_1_1_1392	GCA_016861285_1_1_1392	+	1852308	.	pfam00717	Peptidase S24-like. 	MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEVLAFDSNISEIKESICRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVVAINGDNEATFKQYKELGTKTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	mmseqs_cdd	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0027	shell	direct	high	656	0.998	GCA_016861285.1_01469
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1443551	1444324	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	16087	16860	GCA_016861285_1_1_1393	GCA_016861285_1_1_1393	+	1852308	.	PF09192.10	Actin-fragmin kinase, catalytic	MATVEEVLLDKRMDKIIFIRERMEMGITRPFICQTDKENWFIIKTLSMMPISQLLAEVIGSTLAHEIGLPCPSIDFVEITPKSTQYVSSEWRQDLPNGIAFASSFVVNAKIAKTVQVKNPAFLSEPEQKLLYMFDRWILNSDRTASQVGTGNINLLFDEQQQKILVIDHNLAFDERADFSEHIFSPQNREWRLDWVDKQTFTDKAIDTLKKFDHIYQSIPDDWFVGDEEFHKIEHQINRIKALLNRITQENYWDNIE*	hhsuite_tools	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0028	shell	direct	moderate	707	0.913	GCA_016861285.1_01470
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1444321	1445136	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	16857	17672	GCA_016861285_1_1_1394	GCA_016861285_1_1_1394	+	1852308	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRYRPYFETGEFVNVGLLMCEPEKKKLTYQLVPKNNKRVNDFFYKSKMFETVRETINDELQYVVNQPFNGSAQDIATFFHHYIDVKEGIVQYSNAAVGMVDDPQDYFNKLYTQFIQNAGVKTESQEQVILKHYKTLFRQENDSVLAQYKQYMVNGDFAKFALPLALKNQQDKHILKAVKPLAFDQVESPSMIEHCDSWVAKINRAEQEGFIKRENILFALDTPNTAHKANILDTIKRTFDHFKLQHISWNEDKQIINFAKAI*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0029	shell	direct	high	815	0.999	GCA_016861285.1_01471
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1445628	1445801	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	18164	18337	GCA_016861285_1_1_1395	GCA_016861285_1_1_1395	-	1852308	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MKFETYVDARIEWRWRLKADNGKIIADSGESYKNYTDCLHAIDLVKSTNQSTKVEMA*	mmseqs_cdd	nonviral_gene	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0030	shell	direct	high	173	0.994	GCA_016861285.1_01472
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1445815	1446024	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	18351	18560	GCA_016861285_1_1_1396	GCA_016861285_1_1_1396	+	1852308	.	.	hypothetical protein	MKKYLFHYYFQGTKWACDVYANNPEEAKEKIKAMSQAIYDGELKFEIHIPENPLSKLARLVARIIKKFT*	.	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0031	shell	direct	high	209	0.995	GCA_016861285.1_01473
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1446234	1446401	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	18770	18937	GCA_016861285_1_1_1397	GCA_016861285_1_1_1397	+	1852308	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMADIKQTRLKNGRKKKKTAYLKMIKN*	.	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0032	.	unmatched_CDS	none	0	0	.
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1446958	1447332	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	19494	19868	GCA_016861285_1_1_1398	GCA_016861285_1_1_1398	+	1852308	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTNSNLIPVFNGLIQNQPVQLCNARELHAFLEIQTRYNDWIKNRINEYGFIQDEDYLVITERTNGRPRKEYHITLDMGKELGMVERNERGRQIRQYFARCERTLKALQPTTTARLARTRKEIQF*	mmseqs_cdd	common_virus	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0033	shell	direct	high	374	0.997	GCA_016861285.1_01475
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	CDS	1447664	1447783	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	20200	20319	GCA_016861285_1_1_1399	GCA_016861285_1_1_1399	+	1852308	.	.	hypothetical protein	MNKLIITLVCAFVVYMVHALNLNQDFDGKICHAEQAQQY*	.	hypothetical_protein	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_CDS_0034	shell	direct	high	119	0.992	GCA_016861285.1_01477
GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote	cenote	tRNA	601176	601258	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C30	15336	15418	tRNA-Leu	tRNA-Leu	-	1852308	.	tRNAscan-SE score: 57.5	Leu	NA	tRNAscan-SE	.	C30	18928	585841	604769	GCA_016861285.1|AP024414.1@region_585842_604769@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote	cenote	tRNA	1260136	1260212	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C66	4306	4382	tRNA-Val	tRNA-Val	+	1852308	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C66	52194	1255831	1308025	GCA_016861285.1|AP024414.1@region_1255832_1308025@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote	cenote	tRNA	1438845	1438915	GCA_016861285.1	AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285.1_AP024414.1	GCA_016861285.1|AP024414.1	GCA_016861285_1_1	GCA_016861285_1_1@C76	11381	11451	tRNA-Trp	tRNA-Trp	-	1852308	.	tRNAscan-SE score: 48.8	Trp	NA	tRNAscan-SE	.	C76	20319	1427465	1447784	GCA_016861285.1|AP024414.1@region_1427466_1447784@tool_cenote_tRNA_0001	.	.	.	.	.	.