core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1968000	1968776	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	1	777	GCA_017299035_1_1_1814	GCA_017299035_1_1_1814	+	5117340	.	PRK10812	putative DNAse; Provisional	MLLVDSHCHLDSLDYQTLHQNVDDALAKAKARDVGYVLAVATTLPGYRSMTELIGQRNDVAFSCGVHPLNLEEGYDYAELRHLAAAEQVVALGETGLDYFYQKDNLELQQDSFREHIRIGRDLNKPVIVHTRDARADTLAILREENAQDCGGVLHCFTEDLATAEALLDLGFYISFSGIVTFRNAEQLREVARYVPLDRILVETDSPYLAPVPHRGKENQPAYVRDVAEYMAVLKGVSLEQLAEATTANFSRLFHLDL*	mmseqs_cdd	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0001	persistent	direct	high	776	0.999	GCA_017299035.1_01898
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1968790	1968972	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	791	973	GCA_017299035_1_1_1815	GCA_017299035_1_1_1815	-	5117340	.	.	hypothetical protein	MFDDNHVSMIEPRNFAKTGVFLAKESKKRAPTTLKREGTLPVSVINYELKKNYADNDLQL*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1969119	1970552	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	1120	2553	GCA_017299035_1_1_1816	GCA_017299035_1_1_1816	+	5117340	.	PRK11089	PTS system glucose-specific transporter subunits  IIBC; Provisional	MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIAAKHLADTGVLGGIISGAIAAYMFNRFFRIQLPEYLGFFAGKRFVPIISGLAAIVLGVVLSFIWPPIGTAIQTFSQWAAYQNPVVAFGIYGVVERALVPFGLHHIWNVPFQMQIGEFTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYVIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKIWLFPIVGIVYGLVYYTIFRVLIAKLDLKTPGREDTAAEQTAQGGSEMSAALVQAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYIRNH*	mmseqs_cdd	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0003	persistent	direct	high	1433	0.999	GCA_017299035.1_01899
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1970729	1970977	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	2730	2978	GCA_017299035_1_1_1817	GCA_017299035_1_1_1817	-	5117340	.	PRK09678	DNA-binding transcriptional regulator; Provisional	MFVCPICGAMARTRTSRRLSEMTIRQYHQCQNFECSITFTTLNSVEKLVTKRGPREELPPNFIPQDAFPTSHYGRDQLNLSL*	mmseqs_cdd	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0004	persistent	direct	high	248	0.996	GCA_017299035.1_01900
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1971023	1972297	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	3024	4298	GCA_017299035_1_1_1818	GCA_017299035_1_1_1818	-	5117340	.	PDB:3D37_A	Tail-protein	MIFAEKRQRNTRRWLSSAGDNNARFSPSRAHETISAKGGAMALTTDAIDKAKSLLGSGASTFNDYQTELSRVPAFSVLLGGKELTRLDERVLSLEMTDNRGFEADELTITVDDTDGQLQLPPRGAEVSASMGWHGEALVYKGIFIVDEVAHTGPPDTLTITARSADFRDEFNVKREVSWHDVTVERVVSAIARRYNLKAIISQQLMELEIDHADQTQESDMSFLTRMAEMLGAIATVKNGSLLFILPGGGVSANGKALPSFAITRSSGDRHAFRIADRDAYTGVRAYWLDLEFGKKKKVTVKARKPAKKKVQRSSSREGDYIEGADGNVYVLRKTYNNETAAKRAAAAKWQQLKRGAAEFTLTLAYGRADLYPEQHGTVSGFKTDIDNQDWIIARASHSIDGNGFTTRLELEAKIPEWIAESEK*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0005	persistent	direct	moderate	1155	0.906	GCA_017299035.1_01901
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1972329	1973510	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	4330	5511	GCA_017299035_1_1_1819	GCA_017299035_1_1_1819	+	5117340	.	PDB:3J9Q_Q	tail-sheath-tube	MTDNFFHGARVKENTDLQTAINDVDSTVIGLVAVADDADATTFPLDTPVLITRVISVLGKAGKTGSLYKSLKAISDQVSTRVIVVRVAAAGTEDGAKTQSQLIIGGSQADGSYTGMFALLTAEQKVGYRPRILGVPMYDTQEVTAQLRVIAKQLRAFSYSYCDGCETIAEAKTYREQFAEREGMLIWPNFIACNPVSGENEEFPAVAYALGMRAKIDNEQGWHKSLSNVAVSNVLGITKDVFWALQAEDSDANELNANEVTTLIKRDGFRFWGNRTTDKDEYIFEVYTRTAQILADTIAEAQFTTVDSPLTPANVKDVVSGINAKLQGLVTAGRLIGAACWFDIVDNPTTGIRQGKVVVRYNYSPVPPLEDLTMIQTFTDQYYEAAFASLGGA*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0006	persistent	direct	high	1181	0.999	GCA_017299035.1_01902
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1973511	1974026	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	5512	6027	GCA_017299035_1_1_1820	GCA_017299035_1_1_1820	+	5117340	.	PFAM:PF04985.13	tail-tube-protein	MAIPKKLRLFTLYVDGTNHIGKIPSVTLPKVTRKTEDYQGGGMQGAVAVDLGLDGGALDASMVVGGVVEELILKYGGGIDEMRLRFVGEIYSGGTSSLMEVEMRGRITEIDQGEAKQGDDTNHTYAIKNTYYKLSVDDKALLEIDLLNFIYKRDGKNLYPDRIVSALGLGG*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0007	persistent	direct	high	515	0.998	GCA_017299035.1_01903
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1974085	1974384	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	6086	6385	GCA_017299035_1_1_1821	GCA_017299035_1_1_1821	+	5117340	.	PFAM:PF10109.8	tail-assembly-chaperone-protein	MSVTLTTPIKRGNSEITTVTITDTIKQAGSLRGLRLVDVLNFDYDAVSTLLTRVTAPALTAAEIAALDTGDFVAFIEEMTPFLTKAAPSVPNVAETGNK*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0008	persistent	direct	high	299	0.997	GCA_017299035.1_01904
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1974547	1977522	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	6548	9523	GCA_017299035_1_1_1822	GCA_017299035_1_1_1822	+	5117340	.	PFAM:PF10145.8	minor-tail-protein	MDLSIRVAFNAIDKLTRPVKAASKAVSGLSDSLKKTQNAVKDLDKQAASFDRLSAQVSNTAKKINSAKRDISGLNQVVREGGQLTDAQAAHLENLRGKLTRLTQTYSQQTAKLREAAQAVRQHGVNLSAGSGAVQSAIRRTEQYNQQLERERRQLAAVTQAQAGYTRAKDAAGKLRGAGMGMVAVASVAGYAEGRFLSPAVGFDQDMSRVQALTRIDSKDPRFTQLREQAKKLGAETAFSGRDAASGQAFLAMAGFTPEAIQAALPGILNVAIAGGALTGDISLGETADIGASILNQFKLNSADMDRVGDVLAGTFTRSSTNLRDLGDTMKYTGSVGANLGVGLEQVAAMAGLLANNGIRGSDAGTALRASLSRLASPPKAAAKALNELGVSVADSKGKMHDAMTILTDLYKATRKYGEVDRVGFFKDIAGEEAYNSLMTLVNGAGSGDLQKLLAEIGTAHGNNESFKVAKTMSNNLGGDLSNLGSAWEGLQIEISDTVKGPLRELVQWFDDVISRISVWVKENPRLAQSILLTAGAVTALVAALGIASLATGLLIGPLAKLRLGFTLLTGGRGLMGTVSALRGFVGAGGNAMARVSGWSRVLTSLSGGVRGLQGSLATLRSMLMGVFMAPSAALGSLVRGVMGLALRLTGLSTLWGILTGALSALGAVLSFLLSPIGLIGAAFVAAGVLIWKYWEPIKAFFVGFGSGVMAALAPLREAFARIAPIFGVIGDALSSVWDWFTKLLTPMQTSKDTLDKCASAGETFGRVFGAALQLLFAPITFLMDSVGWLLEKLGLIPDGIEQARIKAEKMKLELTPEGQQRLGGKVGLLAGDLASITKPASVSTDAPKPPALTGDTGTLRRLNEIAGNTKATADNTNVTKRIGPGDIVFKNLPRALALRGAYQEARVMPQPVPRVAAAAGGGVLSVPSASQPAAMAPVSAPGGGGPIFQLFFNDVGQRSDQELERMVRSAVRDAMASTVRGNRGSFRDRD*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0009	persistent	direct	high	2975	1.0	GCA_017299035.1_01905
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1977536	1978027	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	9537	10028	GCA_017299035_1_1_1823	GCA_017299035_1_1_1823	+	5117340	.	COG3499	Phage protein U  [Mobilome: prophages, transposons]. 	MMMVFGMFVFTLRTAPYQQLRHSQDWRHVKNDRINQSAGWQYIGAGDDSITLDGVLYPEITGGNLSLSSLETIGFTGRPWPLIEGDGRIYGMYVMTRLERGKSEFDRYGNPKKIEFSISLSRVDSDFREKLQTTSASDVLGELRTSASRAVNSVTKSVNGLFG*	mmseqs_cdd	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0010	persistent	direct	high	491	0.998	GCA_017299035.1_01906
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1978120	1979154	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	10121	11155	GCA_017299035_1_1_1824	GCA_017299035_1_1_1824	-	5117340	.	PFAM:PF12571.7	tail-collar-fibre-protein	MGKFFSIITNRGAEKIAAAAAIGEKLSITVMAVGDGLGTLPQPHPEQTQLLNERYRADINSLNISNADQRVIAVDMVIPANIGGWWMREIGVYDNDGDLIAVANMPETYKPLLDEGSGRLQIIRMELMVSSTADVELIVDPDVIIAPVTYVDNKFNEAKGRADDAYALAENKAAFDDIYPPGISIFFATNLNPNEKWPGTTWHYTGENKTIRIGKADGSDVGAEGGSDTVNITRANLPQSVLNVSGSTNEQGAQTLQTTPAGRHRHQGGMSAPGETWDDDYIVGSDNDSRRTRNYTSEAEDHTHEATVPPHSHTVWAQTEALGQGQAINVVESHIKLMCWYRAA*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0011	persistent	direct	high	1034	0.999	GCA_017299035.1_01907
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1979158	1980060	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	11159	12061	GCA_017299035_1_1_1825	GCA_017299035_1_1_1825	-	5117340	.	.	hypothetical protein	MASLAMDTGKLYDGLRSSINLAGALLKPAEIFDKHKKRVIDDGGIILNEASLMDEINFLVENDAWTNMASFAAPEWGIKKNADGNVIKMYGLGDTPDYEAVVAGTTVNPITLDTAREIPVLNIKLQNGGTYLRTARMLPIQKTRNAQYLMAVRALDLDLNDNTGIAVSFINSSFPAIYFWSVSRQAQKYSWFYACDKFNPPTGAGGANVSRAPFDGTITRTAALVDVVGERMRGYENGTLYQEDLKTPPPNISGVMGYLQVAGRYPSDLTSSDGAYGCIGRIRVLSQATEDLAKLISQRA*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0012	persistent	direct	high	902	0.999	GCA_017299035.1_01908
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1980066	1982372	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	12067	14373	GCA_017299035_1_1_1826	GCA_017299035_1_1_1826	-	5117340	.	PFAM:PF03629.17	tail-fiber-protein	MGNLNNRSLWTENIYQIEDSDLVKGGESGVGNIQASQLAARTTYLKNLFETLMSMVSLGESPYSSVEKAQAAIDSGKIPLDAVFSVLSADNEKAVELYKNENGIATPTGDSYASLAFVEVLSSALDFLNARIPRQLGANLAGYQFMITDSTGIKGLFGIDDDGGLVATGLDEPMQDYLRNMVSTSFSNRIAGYQVVIFAQDMKNALFAIDDDGGAWLPGMDEPVQNYLTPIQPAGFSSRIEGYQFVLFAKALSDAILAIDNDGGLWLPGMNEPVQDALSASGPGLVRPHNGIPALFADKTAETPVWDRAPVVSATPITRDGVSFIFQENAVLRAGLFPLRYPVNQGYPIRELPLKPAEIHALYGRGQSLRVGQDARLSDFDPEYAGHLLMFSGAGQDRGCQWPPDGPVTDTTLGGFTDAQPLPYRQNCQVPGALHVLRRHKKRGIAVDDMPILLTRMDAKSGTGYEGLKKGTLPYLDGLTSCQAFTNRAIAVGKIPIVKCVGYTFGEHDSALVSEFGQFRAMQDEWINDTQADLMKITGQASRILIDLDQIGSVMVVPRPGQSTLRGDIIAIDQWELSLARLDVFMSTPKYHLNRQFASDFQHLNGLGYCILGEYQGQAEDFTLYDRLTNPQGRKWRPVEPESIVAINENTFDVTLNSPLGGALRINTDIGTAPNLGIDLSLKSTEVNSVQQNSDRVFRIVTNGPPAAGDYFRFGFNAIDNKDFNGINWTHPLVNISDESNILSDYKKGFKLTNWCVLSRIAVPAERG*	phrogs_hmm	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0013	persistent	direct	high	2306	1.0	GCA_017299035.1_01909
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1982365	1982976	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	14366	14977	GCA_017299035_1_1_1827	GCA_017299035_1_1_1827	-	5117340	.	PFAM:PF09684.9	Tail-protein	MNNTLLPPSAGAWMRHTETVTARLSAITVALRTLWTPTACPVELLPYLAWALSVDRWDKNWPAEKKIAAIQQSYWIHRRKGTRAAVRRVIESMGFSATFAEWFDAGDRPGTFRLEIDVRDVGLTEKTLAELNRLISDAKPVSRHLAQLNIAVKVSGFIYAATAVHDGNIITVYPDRYLPESDVTYNGSIKYIGNHTYSGKNYG*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0014	persistent	direct	high	611	0.998	GCA_017299035.1_01910
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1982969	1983868	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	14970	15869	GCA_017299035_1_1_1828	GCA_017299035_1_1_1828	-	5117340	.	CDD:PHA02568	baseplate-assembly-protein	MPTIDLSQLPSPQIIEPLDFETILVDVKAVMIAAFPDDQQASVAAALSLESEPLNVIAQAMAYRELLLRRRINEGAAACMLSHAEGTDLDNLAANLDTERLTITQETDTSDAVMESDEALRLRAQSAFEGMSVAGPSAAYEYFARSASGKVADARATSPAPAEVVIAVLSTDGDGTASPELLAAVTAAVNDEEVRPLGDRVTVRSADIVDYSIDAELFLYPGPESEPIINAAMASLRGFLADNDKKIGRDVARSAISASLHVQGVQRVVLRSPSTDLQISDTQAARNIGYTVENGGTDE*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0015	persistent	direct	high	899	0.999	GCA_017299035.1_01911
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1983855	1984223	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	15856	16224	GCA_017299035_1_1_1829	GCA_017299035_1_1_1829	-	5117340	.	CDD:PHA02516	baseplate-wedge-subunit	MSEKYRGMNNSGTGTLTDADHVWQSANDILLTPIGSRVMRRNYGSLVPDLLDSPQNDVTRLQIMSATVIALAAWEPRLALDTINISYSPTGAVTAEMAGILTESMEKSAGTIELRSHNDAND*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0016	persistent	direct	high	368	0.997	GCA_017299035.1_01912
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1984220	1984804	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	16221	16805	GCA_017299035_1_1_1830	GCA_017299035_1_1_1830	-	5117340	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MDAAELIRLLENLIRVGVVTAIDEDNKRVRVATGGLDTTWLRWNAQRAGAFSIWMPPSLGEQVWLLCIGGNPETAIIGGSLYSNDHPAPGGSRNEMVITAPDGARFRYDADAGALEVSGVKTAKLTAEVKVILDSPVVECTNLLKTRQFDVSEGGEMHGDFNHTGGTFVSNGVKVDDHNHGGVQRGGDWTEGTR*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0017	persistent	direct	high	584	0.998	GCA_017299035.1_01913
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1984804	1985442	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	16805	17443	GCA_017299035_1_1_1831	GCA_017299035_1_1_1831	-	5117340	.	PFAM:PF05069.12	Virion-morphogenesis-family	MTDAALFHELDQVFANILGGMSPAGRIRTAREVGRMLRQSQSRRIARQENPDGSKFEKRRRKVLRSQAGIGFIWNGETRRLKNWRATKSSRGRMLTGFDEGRGAVRSFYREDIERYLDINFSQTRKDTTKADPMFRRLRTARFLKARADAGGATVGFTGVAGRIARTHQYGLRDRVNKSGAMASYPRREVLGITKADRMAIARSVIDSLGVK*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0018	persistent	direct	high	638	0.998	GCA_017299035.1_01914
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1985439	1985900	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	17440	17901	GCA_017299035_1_1_1832	GCA_017299035_1_1_1832	-	5117340	.	PFAM:PF06891.10	tail-completion-protein	MKKAELLRDALTAASAWCKANPELFTVFVEKGHIEIQATGEPSFMYVYPLQVFVMNYPGDLDDLMLPLLGWIWEYQPDLLLNPDKNKSIEFEADIANDDTADLLLKVPIWERVMVTRQNGKLLTQHLAEDKPRINGGDWQIVFDPESGGELVP*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0019	persistent	direct	high	461	0.998	GCA_017299035.1_01915
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1986042	1986425	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	18043	18426	GCA_017299035_1_1_1833	GCA_017299035_1_1_1833	-	5117340	.	CDD:TIGR03495	phage-lysis-regulatory-protein	MKAAAVLILLFLAALAGMGWQKHQRELAEQRRDIAERAVEQTGDVLAEVRALRADIGEIEAGMKKLSERRGTNGEQRRETIKTALDGETCAVTPVPAAVADSLQKRAAEVRAADYSGAFAGQPDGKH*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0020	persistent	direct	high	383	0.997	GCA_017299035.1_01916
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1986422	1986976	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	18423	18977	GCA_017299035_1_1_1834	GCA_017299035_1_1_1834	-	5117340	.	CDD:cd16901	P1-lysozyme	MRRKSVIACSVAAIVALAGALWPEKVRTSQAAQLKMAKYEDCRKTPYYCPAGVLTIGMGSTTRVEDRQYSETEIAERWVNDLVRAEKCINSNFNGAAAPQFVFEALTDVSFNVGCTGISWFTDRQGKKQRTTLWKYAQAGNWPGACQRLTDFVNSGGKRLQGLVNRREEFKAWCLSDPALKVEK*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0021	persistent	direct	high	554	0.998	GCA_017299035.1_01917
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1986973	1987254	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	18974	19255	GCA_017299035_1_1_1835	GCA_017299035_1_1_1835	-	5117340	.	PFAM:PF16082.4	holin	MDVIDRLWSWVIYSYSTVLMGIGMMTQREWLATGGLVIGLIAAALGEIHRRRVARSQATTNALLAQLVDAVRSDAENRQDVKALISELKGGQR*	phrogs_hmm	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0022	persistent	direct	high	281	0.996	GCA_017299035.1_01918
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1987245	1987430	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	19246	19431	GCA_017299035_1_1_1836	GCA_017299035_1_1_1836	-	5117340	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MQGDTLDLLCQRHYGTTQGVTEIVLAANPGIAEQIFLTAGQVVELPEIERSTQQETVQLWT*	mmseqs_cdd	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0023	persistent	direct	high	185	0.995	GCA_017299035.1_01919
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1987445	1987942	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	19446	19943	GCA_017299035_1_1_1837	GCA_017299035_1_1_1837	-	5117340	.	PFAM:PF05926.10	head-completion-protein	MSLVAGRTVTPAADDVPDTDDGGETITAGPFWPAIALKDVRLEMRITGAVTTTRLKQAAIEATGHVIDQLAGWQENQLKAGFASLETVPARQINDVSVKIHRYRRAVFSITRALLIENYRDVDTTGDAGEKRAAGLTLQAADLWRDARWAIADIRDEVRNFAEAF*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0024	persistent	direct	high	497	0.998	GCA_017299035.1_01920
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1988046	1988915	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	20047	20916	GCA_017299035_1_1_1838	GCA_017299035_1_1_1838	-	5117340	.	PFAM:PF05944.11	small-terminase	MLTPAQRHFQRVMAERHGKTEEFTEAARTAHEQILHRLRMDQSALKRVQSDQAKAEMKKQLLPHYEGWIEGTLDGNSGRQDEVIVTLMIWAIDAGDYPLAVRIGRYVIEHNLAMPDRFHRTAATALVEELCDPILVQVKADESTDLTAHLQVLDELAQIVDGKDMPDVVLAKLFKVRGFALRGGDDATQAKALELLRQALKLDANAGVKKAIESLARQVKKASQTTDGAGDNDADTSGTAATTDAAAASKTTVPATQHRQRSSTARKPSAAKKTAGKAAGKKAKQDATE*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0025	persistent	direct	high	869	0.999	GCA_017299035.1_01921
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1988960	1990006	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	20961	22007	GCA_017299035_1_1_1839	GCA_017299035_1_1_1839	-	5117340	.	CDD:pfam05125	Major-Capsid-protein	MDNNTRKLFDQYVARQAEMNGVSPAAVAAKFAVEPSRQQKMELAAQQSDSFLSKINVFGVNQQIGQKVLIGSKGPLAGVNNSTTTRRNPADNSKMEPLNYTCRKVNYDYGLGYEQLDTWAHMPEFQPMISAAMGRQMSLDRIMIGFNGNSYADPSNRAANPLLQDCGIGWLEKIRTEAPHRMISGVTVTARDDDNKIIARGTYGNLTSAVYDAKNSLMDEWHKRNPDNVVILAGDLLTSSNFPAINAMSQTNPNTEMLAGQLIVAQERVGNMPTFIAPYFPVNGILITPFKNLSVYYQRGSLRRTIKEEPEYNRVATYQSSNDDFVIEDYGNVAFIDGITFAQPENGG*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0026	persistent	direct	high	1046	0.999	GCA_017299035.1_01922
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1990043	1990876	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	22044	22877	GCA_017299035_1_1_1840	GCA_017299035_1_1_1840	-	5117340	.	CDD:pfam05929	capsid-scaffolding-protein-serine-peptidase	MASTTSTRKKFRVMTSGVTIDGRQVTRDQIHAMAASYNPAVYGARVNIEHYLSPFPDSTFCAMGDVMALSAEDISDGPLTGEAALYAEIEPTARMRAMTDDGKKIYSSVEIHPKFSLTNGPYLVGLAMTDTPASLGTDKLKFAAEKRGEIMRFNTADAEPTMFTAAFEAELMQADQSRSTTGNEWFSRVMGILGKGKKTDDERFSQVHQAVEAVATAQADLTDQFSATAQESASNKQAIAKLTADLAAMKQQVETTDGNFSRRPPAGGGGNVQQADY*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0027	persistent	direct	high	833	0.999	GCA_017299035.1_01923
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1991036	1992757	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	23037	24758	GCA_017299035_1_1_1841	GCA_017299035_1_1_1841	+	5117340	.	CDD:PHA02535	terminase-ATPase-subunit	MTVQETFTRHRARQLYWQGYPPAEIARLMGINQNTVYAWKKRDEWDETPPIQRVTTSIDARLVQLTGKDKKSGGDFKEIDLLTRQLKKLDNGTPATQPKKKVRKKQNFFSESQIAQLRQNILGSLHWHQQGWYDNHHHRNRMILKSRQVGATWYFAREALIRALSDDVKYKHQLNQIFLSASRRQAYQFRSFIRSAAAEVDVELKGGDMIQLFNGAELHFLGTSAATAQSYTGNLFFDEFFWVGQFANLKKVAGAMATLKGLTRTYFSTPSAESHEAYPFWTGEAFNKGRASSSRVEFDTSWKTLNSGLMCPDKIWRQIVTLQDAIDHGWDLTDIDEIRDENSPEEYDNLYGCQFIRNGESAFDYNMLLTCGADGYDDWLDWKPYAMRPLADRPVWIGYDPNGASGKGDSGAISVNAVPLVAGGKFRTIETQRIRGMEFEAQANLIIGMLDRYNVQHIGIDGQGIGEAVWQLVKKKFPAAVCYQFNPASKRMLVLKMQQLVRGGRWEFDRGERDLITAFSAVRKVVTPGGVITYDTDRSRGVSHGDLAWATMLAIINEPLGQDGGSTMTVMEY*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0028	persistent	direct	high	1721	0.999	GCA_017299035.1_01924
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1992759	1993814	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	24760	25815	GCA_017299035_1_1_1842	GCA_017299035_1_1_1842	+	5117340	.	CDD:PHA02536	portal-vertex-protein	MSKRKSPRQRQQPAADTQLDLATELQKLPGLSTFSFDGPWPVSSSYDLLDSMYCADNGRYYDTPISWYGLARQFGHASWHQSALIFKRNVLAGCFIPHKLLSRQAFSAFAMDWVVFGNAYLELRRNVLGGPLALHHTLAKYTRRGSDLDTYWFIQAGLDDYQFPTGAVCHVINPDIHQEIYGMPEYFAGLLSANLSHSADTFRKLYYDNGSHAGCIVYVNSAIADQESLDKLKKTLTDTRRGGAFKNILLHAPNGGKDSVQILPFSQISAKDEFLGVKSATRDDILAAHRVPPQLMGAMPEGNGTFGDVEKAARVFAINELTPIMEAMKHVNDWMGEEVIRFNPYALLDVE*	hallmark_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0029	persistent	direct	high	1055	0.999	GCA_017299035.1_01925
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1994226	1994864	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	26227	26865	GCA_017299035_1_1_1843	GCA_017299035_1_1_1843	-	5117340	.	.	hypothetical protein	MIVLSDNDVILKLAQCNLLPQLPVVFNQPPEQIFINPAARFQLLPQNPDKAIRKCGSQVVYEQLGAFIGSVQDIPEVQDSQLIELLGSVPGIDVGEQLLLASCIENPEAIFMTGDRRCLTAIVANQPALAVVHQRLLDAVVTFESSLLLCVHGTDQAQVYANLVSNPKPDGMLKLALSNAGAAMCECIFSHTREFYDYLAFKDRLPEREWGR*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0030	persistent	direct	high	638	0.998	GCA_017299035.1_01926
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1994868	1995866	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	26869	27867	GCA_017299035_1_1_1844	GCA_017299035_1_1_1844	-	5117340	.	PDB:3DTE_A	IrrE-protein	MTNHNQMSQIYSKFGRAGFNLSYIRRLLPDWWDEKLAETPSGRQYAYLHLARMFSILPDSLKDGSDGVCFNFGGNHKYKHRQNVAENDLDIATAVAYTAAGIVTSNFKTPYDASAVLDPLAIRAKILAKESWVSLDSLVSYCHSIGIPVVFLKSFPQAAKKMAGLALMSHGRPVIVLTQPQKYGYMLFDLAHELGHIARGHLNAENGQCHVDAKIENASTDNIEKEANEFAFLVISGQKSLRIVPTAGRLNGASLARAAQKYGSDNHIDPTHIALNYGFAQNCWGAAVNAVKSLCAGKESDQDFVRAMMKSGMDLENIHEDDLKVLENLIGE*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0031	persistent	direct	high	998	0.999	GCA_017299035.1_01927
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1996015	1998438	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	28016	30439	GCA_017299035_1_1_1845	GCA_017299035_1_1_1845	-	5117340	.	PFAM:PF05840.12	Rep-protein	MTSNARGRHQPSPPLPYPGSGAVAFEYAYSWNAKRDAIVTERADEPASIQLFGATNHAGEPVRVPLFDIAGQSRVADPAPRRLRRRLAALPQYVRRYYTQRLNSLEQSKGMKAANGWLVNTFERHVLPRIDAVNEQYQIGQVPPALIAFRDDFFRIPYSGKKDLKRLAHRLADCMTGEFVRLCDYWAAAADDLAFAVIYAYGRIGYLTQSLNMFAPGWQQYCSGQLSAEDATRAVARLESPAWWLRRLRRLHDQWREHLMIAAGYVSDKATPYCSDPCLKEWHAQKKANREFLKSRELEDVDTGERVSLIDKVDGSVANPAVKRAELMNRMRGFEDLAKARELAGEFYTLTAPSKYHAMQSKTGRRNNKYRGASPRETQRYLCKVWSKVRASWKRAGIRVFGFRVTEPHHDETPHWHLLLFLKPEHIEQARDIFRRYALQVDGDEPGAAEYRFSVKPMDEQFGSATGYIAKYISKNIDGYALDDELDHDTGEPLKDIAKRVNAWASRWRIRQFQQIGGAPVTVYRELRRMPGRDLFLYPQISPAHIAADGDDWVGYTEAQGGPLVERHNLRVRLAYETTENGNDYGDDISKIIGVYSPLSGIQATVYTRLITYKIVPAGADPVLAVDLQAAAPPLGVLSITVRGTQQEEDRQGSNSGLLPPDIDANGCASWPPGGDFEGMTRRERRAFNEYLIAEEKKTRSKQPSQHQRAEKSAQHLERLTDFAVSIGLELTELEAKKLAGGDELSLNGKRWRAGADGTIREAPASYAEKRSAIMSRVFELKKHRARSSQEFANGQVNLSFHGTKLI*	rep_hall_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0032	persistent	direct	high	2423	1.0	GCA_017299035.1_01928
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1998435	1998764	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	30436	30765	GCA_017299035_1_1_1846	GCA_017299035_1_1_1846	-	5117340	.	.	hypothetical protein	MSTKTTQPKPTLAIPKTVPKSVFDVIYTECEGFVECGADPQTIWDACRAAILAQTGGGDYQFVPVEPTEDMIAAAMNCDDVTFNADESFCVNFGNIYAAMLAAAPGQRE*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0033	persistent	ambiguous	low	120	0.364	GCA_017299035.1_01929
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1998761	1999582	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	30762	31583	GCA_017299035_1_1_1847	GCA_017299035_1_1_1847	-	5117340	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MNRTALKWLGSKARIIDTLRQHLPEGKRLVEPFVGSGAVFLNTDYDSYLLCDINSDLINFHNVAKNHPEVLIREARHLFNAHPDQEGYYGVRADFNLRCDSNFIYRAAQFLYLNRHTFNGVCRYNLSGEFNSPFGHRKAPYFPEDEIRAFAEKAQAKKAIFLCCSFPEAIRMAQAGDVIYCDPPYIPASATASFTSYHTDGFTSEQQRKLARMLRIAAKLGRHVVASNSETDAAKALYADFAITSITARRSVSAKAASRADVGEIIATMKASA*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0034	persistent	direct	high	821	0.999	GCA_017299035.1_01930
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	1999579	2000427	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	31580	32428	GCA_017299035_1_1_1848	GCA_017299035_1_1_1848	-	5117340	.	PDB:5M1S_D	DNA-polymerase-III-subunit-alpha	MTPQQQAQQCLNRNCLVLDTETTGLDDKAEIIEIAVIDATGKVLLNTLVKPSKPIPAEATAIHGITDEMVKDAPTWPEVNPQLCSLISGKTIAIYNAEYDLRLLEQTDRIWKVTPKISVMPQIVCAMHEYAEFYGQKSDRGGYKWQKLTAAAEQQGVIIEGTPHRALSDCLTTLGVIEAMAAGGVRRASHGITAQKAVDILNGLFQVDPDAITALVDNRVKCSEYFAKKTAATVGICDSTYIIGMIGVINALISPEVIAAIYDGNELKGFAVADVVFAGGDA*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0035	persistent	direct	high	848	0.999	GCA_017299035.1_01931
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2000446	2000592	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	32447	32593	GCA_017299035_1_1_1849	GCA_017299035_1_1_1849	-	5117340	.	.	hypothetical protein	MMAFCFTLAAIWAVVAFGLVGWVAYRYCKFCRAFNRAASVPPELRNYD*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0036	persistent	ambiguous	low	3	0.02	GCA_017299035.1_01932
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2000589	2000786	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	32590	32787	GCA_017299035_1_1_1850	GCA_017299035_1_1_1850	-	5117340	.	.	hypothetical protein	MQDDELHKAFMNARRSERLQLLELLESKLDRLAADNFTRDQVLSTLKDWINIRRSTDAPKVEKPQ*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0037	persistent	direct	high	197	0.995	GCA_017299035.1_01932
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2000861	2001205	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	32862	33206	GCA_017299035_1_1_1851	GCA_017299035_1_1_1851	-	5117340	.	PF17282.2	Family of unknown function (DUF5347)	MRSQIGNSVGAFMSMTVEQIKSGERFVNNAKSLLARAKNKNHTAFFYNKLMASEKKAICTLGNIDSRTKLTAQHIEMKFEEMSYAERRAVFRGIKLLQKLNRDIPSLINITDCD*	hhsuite_tools	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0038	.	unmatched_CDS	none	0	0	.
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2001262	2001471	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	33263	33472	GCA_017299035_1_1_1852	GCA_017299035_1_1_1852	-	5117340	.	.	hypothetical protein	MKDGLAFLIAWFMAVACMMVWGLIESGGGLKELKAEFIKHGWPVIKMILAGLFIFLVIYKSLSIFVVPA*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0039	persistent	ambiguous	low	3	0.014	GCA_017299035.1_01933
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2001468	2001740	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	33469	33741	GCA_017299035_1_1_1853	GCA_017299035_1_1_1853	-	5117340	.	PF15946.5	Domain of unknown function (DUF4754)	MKQPYRILIDTLLLQYHTKATNLHSASAVAPEVRQVSLNDYAFRLCIGLTGLLSTAEAAGDGPAAAVIDRLIMRCNNGDIPSPQQNSGVL*	hhsuite_tools	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0040	persistent	direct	high	272	0.996	GCA_017299035.1_01933
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2001737	2001985	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	33738	33986	GCA_017299035_1_1_1854	GCA_017299035_1_1_1854	-	5117340	.	.	hypothetical protein	MSGNPFYDAANAVIAQYDKRIQYMKPERAVGESANAVINLGRIADAARYAGHPAASIVIENAAKYWQCYGKKPAPFSEDTPA*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0041	persistent	direct	high	248	0.996	GCA_017299035.1_01934
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2001982	2002194	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	33983	34195	GCA_017299035_1_1_1855	GCA_017299035_1_1_1855	-	5117340	.	PF15958.5	Domain of unknown function (DUF4761)	MTEIQPRALIQLSKHTFIYRGFTIQKCPRHSETNRTAYQLVSNGDYFGRDFALAEAMRTVDKMINGKRPA*	hhsuite_tools	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0042	persistent	direct	high	212	0.995	GCA_017299035.1_01935
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2002206	2002475	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	34207	34476	GCA_017299035_1_1_1856	GCA_017299035_1_1_1856	-	5117340	.	PFAM:PF11112.7	Cox-like-excisionase-and-repressor	MNKNRQKKVIGVRENQLPADYPFGDLLEESISDYARRIGKNPQTIRTQADTGALPILQTRPGAKRRVNLYAIYLNAKRHAEKFVAHMGS*	phrogs_hmm	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0043	persistent	direct	high	269	0.996	GCA_017299035.1_01936
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2002928	2003908	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	34929	35909	GCA_017299035_1_1_1857	GCA_017299035_1_1_1857	+	5117340	.	PDB:5C6K_B	Integrase	MSVKSLGADGYMVDVRPQGRDGKRVRKKFKTKSEAQQFERWVIATQNNKEWLDKPADHRPLTDLIDLWWNHHGQHLKDGVKRAQKLRVMAEKMGHPKASQITRTFFADYRSLRFAEGKKAKTVNLDQEMLGGVFSVLIELGHYHGEHPLKAMKKMKLPAQEMGFLTQAEIAALQERLDGDHLKAVRLCLATGARWGEVAKLRKEEVIGNKVTYLNTKNNKNRTVPISPELCKEITSGVKSGPLFKDLNYPYVRLCVKEVAPGLPAGQAVHVLRHTFASHFMMNGGNILALQRILGHSSILQTMVYAHFAPDYLEDAVRFNPLTSVA*	common_virus_hmm	common_virus	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0044	persistent	direct	high	980	0.999	GCA_017299035.1_01937
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2004070	2004426	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	36071	36427	GCA_017299035_1_1_1858	GCA_017299035_1_1_1858	+	5117340	.	.	hypothetical protein	MPEMNNFIQVPFRVDGWNSNALLKELNEAGFETQITRRHFSAGSTGGDFFNLALELAPYAFGLLSSVLVAYVTRGKKVKISFKDGRVTELETNYCSVKEVTKLLESIESVRQIDVSNN*	.	hypothetical_protein	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0045	persistent	direct	high	356	0.997	GCA_017299035.1_01938
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2004569	2004934	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	36570	36935	GCA_017299035_1_1_1859	GCA_017299035_1_1_1859	-	5117340	.	PF13788.6	Domain of unknown function (DUF4180)	MSYAVQQIHDLRLVVFAEAGPMLKDENDVSLFIAPAFEHEAGMIALPVSRLDPAFFQLRSGVAGTVLQKFINYRLRVALLGDITPWLAQSCALQDLVREANRGEQVWFLPSLAELEQRLGA*	hhsuite_tools	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0046	persistent	direct	high	365	0.997	GCA_017299035.1_01939
GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote	cenote	CDS	2004949	2005419	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C92	36950	37420	GCA_017299035_1_1_1860	GCA_017299035_1_1_1860	-	5117340	.	PRK11050	manganese-binding transcriptional regulator MntR. 	MVTRAPDNADRHAQTDMPDEAEHALRFSRAREAQSNALIEDYVELIADLLQSTREARTTDIARRFGVSHPTAIKNIARLKSAGLVESRPYRGVFLTEEGEQLAQKVRRRHRIVVDLLMCLGVPSETAELDSEGIEHHISDETLAVFEHYLQKHAKP*	mmseqs_cdd	nonviral_gene	C92	37420	1968000	2005420	GCA_017299035.1|CP071226.1@region_1968001_2005420@tool_cenote_CDS_0047	persistent	direct	high	470	0.998	GCA_017299035.1_01940
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3451173	3451772	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	1	600	GCA_017299035_1_1_3222	GCA_017299035_1_1_3222	+	5117340	.	PFAM:PF03472.14	sigma-factor	MSLIHLVDDDVAVTDACHFLLTSLGHDVQCWNDSAGFLAQADLFQTGIVLLDMRMPILDGHQAYAELRRRGSTLAVVFLSGHGDVPMAVEQMKYGAVDFLQKPIAAEPLIAALERAQQVSAKAWRRHETCGRYRTLTPKERDIAQLVVRGMMNREMAERLNIALRTVEVHRAKVMEKMQAASLAELVIQLQVLPHAAQE*	phrogs_hmm	nonviral_gene	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0001	persistent	direct	high	599	0.998	GCA_017299035.1_03326
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3451864	3452106	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	692	934	GCA_017299035_1_1_3223	GCA_017299035_1_1_3223	+	5117340	.	pfam06183	DinI-like family. This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity. The structure of DinI is known.	MFVELVYDKRNVAGLPNAAEIIRNELEKRVHALFPEADVRVKPMQANGLNSDASKSDREKLNRMLEEMFEEADQWLVTDI*	mmseqs_cdd	nonviral_gene	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0002	persistent	direct	high	242	0.996	GCA_017299035.1_03327
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3452261	3453763	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	1089	2591	GCA_017299035_1_1_3224	GCA_017299035_1_1_3224	-	5117340	.	PFAM:PF06820.11	tail-fibre	MTLISGVLKGPYGDPRSGVTITLRAVRTSSTVLSLAKSQSVTDDSGKYSLPVEPGAYEVIISVYGAQPERVGAIEVYNDSLPGTLNDFLRRPGESNITPEIVQTVDRLRAEAALSADKSAASAAAAKVSEQNAAENSKVVIAAGFASGPVHTADIFSTDNKSSLRRYTTATANRPGGAAGGVMVLPVDGGPSSAYFATSVERKAWVGSSTPAAASTISWSRLFSTTDLPGVADISDLKYWGLTKGVSAASKGNFNAQMQSRRGYVSTDPIGNPFKDVGTYFLDTRSWAVTQAGTDDSYRTVQTCYGYGVSATQTGKIAVRSWNGTAFTPWVWMWSEANTTVDGNGFIKKASPIARLSAAPEHMQADYLDGCFALAGCVAVNGEATGVSAERISTGVYQLSGSLGLAKEGWTIEVPQDVNGNRLCFVETATDSDGVITVKISKRRFDIDTATVVAGEAMDIPEGRWIDLRLAMPAREEVEVLPPDALVSNDDVSSETNAVS*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0003	persistent	ambiguous	low	732	0.487	GCA_017299035.1_03328
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3453760	3454917	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	2588	3745	GCA_017299035_1_1_3225	GCA_017299035_1_1_3225	-	5117340	.	UniProt:tr|A0A0N8LSN6_CITFR	Tail-protein	MPAGTLTLTNNSTIVKGTGTAFNTELKAGDLIVSVVGGVTYTLPVKTVDSATQATLIKAYDGPTQSGAAWYAVPRDAMNAITAQLAAETAKALRGLNLDKENWQQVFSNTGNITVKLPDGSIYSGQAWNNISASLNNKLDKTISAAQEIKGSLSLQGSLVTGQTANLDVGGYSRFRKSTTFDDTIFSPKGLIADGGNNESPSVICHRTSTAMAGQVTGGTFLSTLKQNGLKTAMVMALRREIGIEDYGYISYQDYAGNWHEARWLASGNINNMTGSWVTGSDRRIKTDIEVINDPISLVRGLKLYSFNRDGKPQIGGIAQEIEKTMPLLISDGGSITLKDGRNIEKVKSVDYSTLGYVALAALNQALDRIDRQDELIKELMEKVQ*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0004	persistent	direct	high	1157	0.999	GCA_017299035.1_03329
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3454968	3458555	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	3796	7383	GCA_017299035_1_1_3226	GCA_017299035_1_1_3226	-	5117340	.	PFAM:PF13550.5	tail-protein	MAQNMIRGRKGGGGGGHTPVESPDSIQSIARAKMLFALGEGEFAGGLDGTNIFVDGTPVLSSDGTENFPGFRWEFRPGSQAQEYIQGIPAVENEISVGSELKSGAPWVRSVSNLQLSAVRLRLGWPMLQKQADNGDVNGYRIEYAIDVATDGGSYQEVLTAAIDDKTTSLYERSHRINLPKATTGWQLRVRRLTPNANSARIADRMNIEALTEIIDAKLRYPNTALLYVEFDSKQFPNIPKISCKPRGRLIRVPDNYDPQTRSYTGIWSGGFKWAYSDNPAWVFYDIILAERFGLGDRIDASQVSESELYRIAQYCDQLVPDGRGGEGMEPRFTCNVYLQSREEAWTVLSDLAGIFRGMTYWGQNQMVALADMPRDMDFTYTRANVIDGKFTYSSASERTRYSTAMVSWSDPGNHYADAIEAVFDSDLVRRYDVNQTELTAIGCTTPSEANRRGRWALLTNSKDRTVSFSVGLDGMIPMPGHIVGVADQMLAGRVIGGRLSGVAGRKLTLDRKPGAKAGDRLIVNLPSGKAQARTVQAVNDRVVTVTTAYSETPAPEAAWSIDADDLAVQLYRVVGIADNGDNTYTVNAAEHDPNKYARIDTGARIDDRPISIIPPGVQAPPKNITIDSYSSVSQGIAITTLRAAWGAVENAIAYEAEWRKDNGNWVSVPRTSALGFEVPGIYAGRYRVRVRAINASDVSSIWATSMETYLKGKEGKPPMPVGFKTSPLLWGIQLDWAFPGGAEDTLKTEIQYADNAAGNNAMLLADIPYPLHTHAMTGLKAGQEFWFRARLQDRTGNQGDWTGWTAGQANADAGDYLENIGDDLLTAKDGDRLVGDIDTNIDAILQNALANNATVDHQWAQYGTVRADIMVVKTTIAEVDRGLAEMKTQVQAQIDDVAAVLEDKLTATVDADGATAIHTLKAGVRVNGTFYNAGMSIAVLAENGRPVTTRVGFNANQFVLMSGNNSNQYSPFAVVDGQVFISDAFIRNGTIDSAKIAQHIQSSNWVSGQRGWAINKDGGAQFNNISARGAIYADTGEFKNGVIGNCRILESCSIEGKLSAANIEGAIMDGSMLSWTGHNTNASRLLRFGGNNVIPVRVFGQIQIKRSGRGYPHGYGGVRQNTTGGGYMPEVSVSSSSGSGQPSVSIVYIDTLIGKSSTAFWQLASGELDQGQSHSTTFIVNIFATPQYTAFGLE*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0005	persistent	direct	high	3587	1.0	GCA_017299035.1_03330
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3458609	3458896	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	7437	7724	GCA_017299035_1_1_3227	GCA_017299035_1_1_3227	-	5117340	.	PFAM:PF06805.11	tail-assembly-protein-I	MLIGGPVGMGVFSAGGLTGGVALTGAAMALGGILQMLSPQMGGLRMRQGPENKPSYAFGGPVNTTAQGNPVGVLYGTREIGGAIISAGIYTEDQQ*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0006	persistent	direct	high	287	0.997	GCA_017299035.1_03331
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3459267	3459605	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	8095	8433	GCA_017299035_1_1_3228	GCA_017299035_1_1_3228	-	5117340	.	.	hypothetical protein	MKKVLLITAILVSGCSSMSEMRSSPPAESFVSKKDAKSISECILFGYQESSFRYGDVYIQPYSNGYTILSPSNIEITDVFNVNGESKIEYRYQGMMMSHRINNRLNKIKHCL*	.	hypothetical_protein	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3459643	3460347	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	8471	9175	GCA_017299035_1_1_3229	GCA_017299035_1_1_3229	-	5117340	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKEKTAAAIMAHAKAEYPRECCGVVAQKSRVERYFPCRNLADNPTEQFHLAPEDYVAAAEWGTITLIVHSHPDATTQPSELDKAQCDAMELPWAIASWPEGDLRTILPRGELPLVGRQFVLGHTDCWGLVMSYFRQEHGITLQDYRVDYPWWERGENRYLENWHACGFREFDGPPHPGDMAIMQVSAPVANHAGILLADGLLLHHMYGMLSQRVPYGGYWKERTVKVLRHKALM*	mmseqs_cdd	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0008	persistent	direct	high	704	0.999	GCA_017299035.1_03332
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3460357	3461106	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	9185	9934	GCA_017299035_1_1_3230	GCA_017299035_1_1_3230	-	5117340	.	PFAM:PF05100.11	minor-tail-protein-	MLNSDLQKLEPGNRIRLIEVDGTRFGADILRFHCDTLPFTPQELAAAGGDESKLPAKSVWWQGLEYGPWPFSVEGLEISADSQGNAPKLSVANINGLISALCLQFEDMAQAKVRIHDTLVHYLDARNFPQGNSSADPLQEKLQVFYIDRKATESDEAVEFELSSPADLRGLRIPTRQIHSLCTWCSRGGYRTGKGCDYAGSRYFDDKGNPVDDPSQDRCGGLLSDCQKRFGEHEPLPFGGFPGAALIRQ*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0009	persistent	direct	high	749	0.999	GCA_017299035.1_03333
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3461119	3461457	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	9947	10285	GCA_017299035_1_1_3231	GCA_017299035_1_1_3231	-	5117340	.	PFAM:PF05939.12	minor-tail-protein	MGIQTFEFPARVNAAGDTRFRVRKAQFGDGYAQVSGDGINPIVRSWDLTFVGKYDYITPIIVFLENHHGVKSFQWTPPTQVPGLYRCEGYKPVAMGGDNYSLTATFTEAFHV*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0010	persistent	direct	high	338	0.997	GCA_017299035.1_03334
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3461457	3463841	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	10285	12669	GCA_017299035_1_1_3232	GCA_017299035_1_1_3232	-	5117340	.	TIGR01541	phage tail tape measure protein, lambda family. This model represents a relatively well-conserved region near the C-terminus of the tape measure protein of a lambda and related phage. This protein, which controls phage tail length, is typically about 1000 residues in length. Both low-complexity sequence and insertion/deletion events appear common in this family. Mutational studies suggest a ruler or template role in the determination of phage tail length. Similar behavior is attributed to proteins from distantly related or unrelated families in other phage. [Mobile and extrachromosomal element functions, Prophage functions]	MRRKVPPFINPVSPRKAVLICSVLTLCECWEMADTAQLVVGLQLNDTNFKNKLTAAYRTAGEQSAKFNRQAQQDAKKTDESYQRIGGTLGGLAGKLAGLAGVELSLQGLAATSRQYGQALTELASITVAATAQMKQLDDAARQASSASGEGGSRAEEMLKLAGGLNDSAAAWRDQAAAARGAAQATSGVGAASRVANVALGVLGGPIGVAIQAGLAMLYFHEQNQLARQSALALKDAAVETAEDLSKLSKAKLAVKIDTFDDQLKTLSEEKAKIENQLARRSDIRIAGLERRSKGLLGFLYSDPKEVKKERNALQAQLEDVIKGEKAIRLRRSNAVNAQNGNDSHVETKPVKPKSHQTSAPPVGRILNDNGKQQALDQYQQLRQEIEQAHLSSLDKITQDEQSAQAKLASAAKAAGAGQADVQRAMALNAEKYQRQRQQLAEQYAPGQAAVRKEQEVGKALKALYDGRLLTEREYHTASRMQQQEMTRQRLKAETDALAAPGMNIAGDVDPVARLNNQLVQQQAQYQAYYQQGLLDKQRYEQLMQASTQESSDAQYQQALSLFGGQSRVHKMALGLVDMTRERTSGMMFDLLTGTQNFKQSMLGLMTSMTQSIIQQLIDLAMQALLTRTFLSTFMNIGGGLLGGAASAGAGAAGSGAMGMPTGWQGYVPNAKGGVYASPSLSAFSGQIVSNPTLFAFARGAGLMGEAGPEAIMPLKRGADGSLGVRAIGGGPQPSAAPTVYITIENGGNVSSQADPGWGEFGKRMGNIAAQESQKVINRNLMPGQPIWKAIKGM*	mmseqs_cdd	nonviral_gene	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0011	persistent	direct	high	2384	1.0	GCA_017299035.1_03335
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3463980	3464345	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	12808	13173	GCA_017299035_1_1_3233	GCA_017299035_1_1_3233	-	5117340	.	pfam16462	Phage tail assembly chaperone protein, TAC. This is a family of Siphoviridae phage tail assembly chaperone proteins.	MSEKYDLKALKAALLKSDDHVIETQIFGAKAFIRRLKAAELQENEDGMKAAIDSGDMNKAAQLNVQLLLSCLMTPDGKRIPAGALPSVDDLLAAHDNPTLVEAIGAVKRHAVGSLEEAEKN*	mmseqs_cdd	nonviral_gene	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0012	persistent	direct	high	365	0.997	GCA_017299035.1_03336
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3464462	3464917	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	13290	13745	GCA_017299035_1_1_3234	GCA_017299035_1_1_3234	-	5117340	.	PFAM:PF16463.4	major-tail-protein	MADKTSPEYAMLPAGTIVKWGTVGAAPTAMKALTNCKAVGEMGQTGGFVDCTTLLDTAKQFISDLPEGAEKSIGFIDDPSNADFAALLNAADKRETVQFYVELPNGRTSTSILSLSGWKMNEITAPASEVIQITVQGKQNSNTWGSVTPKV*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0013	persistent	direct	high	455	0.998	GCA_017299035.1_03337
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3464959	3465351	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	13787	14179	GCA_017299035_1_1_3235	GCA_017299035_1_1_3235	-	5117340	.	PFAM:PF04883.11	tail-component	MIAINVSGMAELTRRLEAIRREVASHILPEAGHAALAPLLSTMRQCAERGASNSEPSLSAGIAIRPAVTGWNAVTLRVGPSKQHYHRALAQEYGTATQAAAPFIRPALDHHKHQVLRILAAKVRYGIENR*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0014	persistent	direct	high	392	0.997	GCA_017299035.1_03338
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3465348	3465737	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	14176	14565	GCA_017299035_1_1_3236	GCA_017299035_1_1_3236	-	5117340	.	PFAM:PF05657.10	tail-completion-protein	MIEDEIQRSLAALTHLAVHPLILPDPQQEGVTYQKISDLKVNTGLVDSSLVQSRFQIVLYVIDDYSRLIALDKAVLNAWEGGRHGHIGEWPVQAVTRSTLLQSATPLADNRVQYRMARDYLITHSEVAA*	hallmark_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0015	persistent	direct	high	389	0.997	GCA_017299035.1_03339
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3465794	3466234	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	14622	15062	GCA_017299035_1_1_3237	GCA_017299035_1_1_3237	-	5117340	.	PDB:3HDF_A	Lysozyme	MKISDDGMALIKRFEGLRLQAYQDSVGVWTIGYGWTQPVAGRKVGAGMAIDVATAERLLVCGVAQFERGVERLVAVTITQGQFDALVSFAYNLGLRALENSTLLRRLNAGDRQGAADQFGRWVNAGGVRLDGLVARRAAERALFLT*	common_virus_hmm	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0016	persistent	direct	high	440	0.998	GCA_017299035.1_03340
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3466231	3466536	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	15059	15364	GCA_017299035_1_1_3238	GCA_017299035_1_1_3238	-	5117340	.	PFAM:PF05106.11	holin	MPWKNEPNILSMLLAFGMTLLGAIASYSFKVLNGETFSWRTLFLQLFVSIFAGLTMVMIALHYDWPSEVMGGVCGMAGWSGASLIKALERRFLNKASGGNQ*	phrogs_hmm	hypothetical_protein	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0017	persistent	direct	high	305	0.997	GCA_017299035.1_03341
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3467341	3467703	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	16169	16531	GCA_017299035_1_1_3239	GCA_017299035_1_1_3239	-	5117340	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRDMNEVLERWGVWARDNSGIDYSPIAAGFRGLLSYKSKGERSCCDDDGLVIDGCVGRLKKYKPEEFDLIIAHHVYGISLRKIALKRKCSDGTIRKEMQTAEGFIGGCLAMLDIKLTMDR*	mmseqs_cdd	common_virus	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0018	persistent	direct	high	362	0.997	GCA_017299035.1_03342
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3467945	3468622	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	16773	17450	GCA_017299035_1_1_3240	GCA_017299035_1_1_3240	+	5117340	.	PFAM:PF08667.9	transcriptional-repressor	MKNEQKMHLQEMRRERLIILIDNLGVGGQKRLAEALDIAADYVSRLLYPPGKKGKKGISGDMARRIEQYFAVQIGWLDGLEQTGQRPVRQKTSQALGKTLPLLTWTLPLSHEQLRKGTTVHYPAMVQCSAHAYWLPVRDNTMNGSAGANYPKGALILVEPVTAGITELASGDKVIAKRCDSAELIFRRYVEEAGHRWLKGSMPGCPAQNADEYAIIGVVLGAWLP*	phrogs_hmm	hypothetical_protein	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0019	persistent	direct	high	677	0.999	GCA_017299035.1_03343
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	CDS	3469025	3469354	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	17853	18182	GCA_017299035_1_1_3241	GCA_017299035_1_1_3241	-	5117340	.	PRK11251	osmotically-inducible lipoprotein OsmE. 	MTKKLVLAVGTAAVFSILAGCTAYDRATSYVNEPVVSDVKVGMTKQQVRAIAGPPSTSATLIHAQGTCDTYAVAPRDGKVQTYFVSYNDTGHVMNKGYQTCSDYDSQPK*	mmseqs_cdd	nonviral_gene	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_CDS_0020	persistent	direct	high	329	0.997	GCA_017299035.1_03346
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4420346	4421590	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	1	1245	GCA_017299035_1_1_4114	GCA_017299035_1_1_4114	+	5117340	.	PRK10885	multifunctional CCA addition/repair protein. 	MQIYLVGGAVRDSLLNIPVVDHDWVVVGATPAELLALGYQQVGKDFPVFLNPDTHEEYALARTERKSGQGYTGFTCYAAPDVTLEDDLLRRDLTINAIARSTEGELIDPYGGVADLQARVLRHVSDAFGEDPLRVLRVARFNARFAHLGFRIADETLALMRRMAHSGELAALTAERVWKETEKALQSQSPQVYFQVLRDCDALAVLFPEIDALFGVPAPAKWHPEIDTGVHTLMALAMAARLTPEVDVRFATLCHDLGKGLTPKAFWPHHHGHGPAGVRLVEALCQRLRVPNPVRDLSKLVAEYHDLIHTVNKLRPETLLKLFDAIDVWRKPQRLEQMILTSEADARGRTGFEENPYPQGDYLRQAYQVANAVSIKEVVASGLQGTAIRDELKRRRQQALADWKLNQTILNDQA*	mmseqs_cdd	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0001	persistent	direct	high	1244	0.999	GCA_017299035.1_04253
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4421632	4422456	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	1287	2111	GCA_017299035_1_1_4115	GCA_017299035_1_1_4115	-	5117340	.	PRK00281	undecaprenyl-diphosphate phosphatase. 	MADMHSLFIAFVLGVVEGLTEFLPVSSTGHMIIVGEWLGFTGDKAKTFEVIIQLGSILAVVVMFWRRLFGLIGIHFGGKPVEHEGKTSGQLKLGHILLAMIPAVVLGLVFHDVIKSLFAPKNVMYALVVGGLLLLAAEWLKPKKPRAEGLDDITYRQAFMIGCFQCLALWPGFSRSGSTIAGGMLVGVNRYAASEFSFILAVPMMIGASGLDLYKSLHFLTWGDLPMFAVGFVTAFVVALIAIKTFLSLIKRISFVPFAIYRFIVAAVVYMVFL*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0002	persistent	direct	high	824	0.999	GCA_017299035.1_04254
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4422590	4422949	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	2245	2604	GCA_017299035_1_1_4116	GCA_017299035_1_1_4116	-	5117340	.	PRK11593	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase. 	MDIVFIEELTVITTIGVYEWEQGIRQKLVFDIEMGWDNRPAAASDDVNDCLSYADVSDAVIQHVESNRFALVERVAEEISEMLLQRFNSPWVRIKVSKPGAVAHANRVGVIIERGTRPA*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0003	persistent	direct	high	359	0.997	GCA_017299035.1_04255
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4423057	4423695	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	2712	3350	GCA_017299035_1_1_4117	GCA_017299035_1_1_4117	+	5117340	.	PRK00220	glycerol-3-phosphate 1-O-acyltransferase PlsY. 	MSATALGMIIFAYLCGSISSAILVCRIARLPDPREHGSGNPGATNVLRIGGRLAAAAVLVFDILKGMLPVWLAYKLDVPPLYLGLTAIAACLGHIYPVFFHFRGGKGVATAFGAIAPIGWDLTGLMTGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVAMLSCLILMRHHDNIQRLWRGQEGKIWGKFRKKKNDADNGDQPREE*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0004	persistent	direct	high	638	0.998	GCA_017299035.1_04256
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4423726	4424739	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	3381	4394	GCA_017299035_1_1_4118	GCA_017299035_1_1_4118	-	5117340	.	3ZEU_E	PUTATIVE M22 PEPTIDASE YEAZ, PROBABLE	MRVLGIETSCDETGIAVYDDQTGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKEANLTPADIDGVAYTAGPGLVGALLVGATVGRALAFAWNVPAVPVHHMEGHLLAPMLEDNPPAFPFVALLVSGGHTQLISVTGIGEYELLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMAQQGTAGRFTFPRPMTDRPGLDFSFSGLKTFAANTIRSNGNDDQTRADIARAFEDAVVDTLAIKCKRALEQTGFKRLVMAGGVSANRTLRAKLAEMMHKRGGEVFYARPEFCTDNGAMIAYAGMVRLKSGANPALSVSVRPRWPLAELPAV*	hhsuite_tools	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0005	persistent	direct	high	1013	0.999	GCA_017299035.1_04257
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4425065	4425280	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	4720	4935	GCA_017299035_1_1_4119	GCA_017299035_1_1_4119	+	5117340	.	COG0828	Ribosomal protein S21 [Translation, ribosomal structure and biogenesis]. 	MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4425417	4427165	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	5072	6820	GCA_017299035_1_1_4120	GCA_017299035_1_1_4120	+	5117340	.	PDB:5IKN_F	DNA-polymerase	MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHHEKTPSFTVNGEKQFYHCFGCGAHGNAVDFLMNYDRLEFVETIEELATMHGLEVPYEAGTGPTQIERHQRQSLYQLMEQLSAFYQQSLQQSSGAPARSYLQQRGLSDDVIRHFAIGFAPAGWDNALKRFGRDADSRRALNDAGMLVTNDKGRSYDRFRERVMFPIRDKRGRVIAFGGRVLGDGMPKYLNSPETEVFHKGRQLYGLYEAQQNHPNLQRLLVVEGYMDVVALAQFGIDYAVASLGTSTTAEHIQLLFRATDNVVCCYDGDRAGREAAWRALETALPYLNDGRQLRFMFLPDGEDPDTLVRKEGKEAFEQRMELAQPLSTFLFESLLPQVDLSSPDGRAKLSTLALPLITQVPGETLRLYLRQELGNKLGLLDDSQLDKLMPKQAENANPYQAPQLKRTTMRILIGLLVQNPQLATLIPSLEGLEQTKQAGLPLFVELVQTCLAQPGLTTGQLLELYRDNKFSQQLETLATWNHMIVEDMVEQTFLDTLASLYDSVLEQRLETLIAQARTRGLSAEEREEVRSLNQVLAKKN*	common_virus_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0007	persistent	direct	high	1748	0.999	GCA_017299035.1_04258
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4427323	4429164	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	6978	8819	GCA_017299035_1_1_4121	GCA_017299035_1_1_4121	+	5117340	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAENSNSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDIAPTATHIGSELSSEEQDDDEEDEDDEDDDTEDDNSIDPELARQKFAELRDQYEATRLVIKKNGRSHASAADEILKLSEVFKQFRLVPKQFDFLVNSMRTMMDRVRTQERIIMKLCVEQCKMPKKNFVTLFAGNETSDSWFEAALAMAKPWSEKLKDVAEDVQRSLQKLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD*	common_virus_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0008	persistent	direct	high	1841	0.999	GCA_017299035.1_04259
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4429220	4429672	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	8875	9327	GCA_017299035_1_1_4122	GCA_017299035_1_1_4122	-	5117340	.	COG4922	Predicted SnoaL-like aldol condensation-catalyzing enzyme [General function prediction only]. 	MTSMMKGCVMALLLVTGAAQAGHSPQEARNKQNVLEFYRQGLNNKDFAAARPFLGEQYKQHNPNAQDGVAGFRQFVELLKTRYPNSHSEIKQAFVDGDYVILHVEVSGREAGKTAAIVDIFRLDSAGKIVEHWDVTQPVPEKTASGNGMF*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0009	persistent	direct	high	452	0.998	GCA_017299035.1_04260
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4429689	4430177	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	9344	9832	GCA_017299035_1_1_4123	GCA_017299035_1_1_4123	-	5117340	.	PRK10201	G/U mismatch-specific DNA glycosylase. 	MELLAPNLRVVFCGINPGLSSAHQGYPFANGSNRFWKVIHQAGFTERQLAPEQWQQLKDNGCGITALVARPTVAASELSRDELRSGGEALQEKILRYQPRALAILGKQAFTTAFGVKNAPWGKQAMMLGQTEVWVLPNPSGLNRATLEQLTASYHELFLALQ*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0010	persistent	direct	high	488	0.998	GCA_017299035.1_04261
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4430558	4430788	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	10213	10443	GCA_017299035_1_1_4124	GCA_017299035_1_1_4124	-	5117340	.	PRK09678	DNA-binding transcriptional regulator; Provisional	MFHCPLCRTAAHARTSRYLSQHTKERYHQCQNINCGHTFKTMETYDSAIMTPGQVDAVPPHPVGASVAGQQQVMWM*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0011	persistent	direct	high	230	0.996	GCA_017299035.1_04263
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4430879	4432027	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	10534	11682	GCA_017299035_1_1_4125	GCA_017299035_1_1_4125	-	5117340	.	PDB:3D37_A	Tail-protein	MITGVSLPAGARVAPDFSLLLQDNDITQNIRKRLISLSLTDNRGFEADQLDIELDDSDGLMAMPQRNAVLSLALGWQGSPLTPKGQFTVDEVEHRGAPDTLTIRARSADFRGSLNTRRDESYHDTTLGDIVQKVAARNKLKASLAAGLGTIKISHIDQTQETDAAFITRLATLNGAVAAVKNGALLLLRPGNGATVGGKALPVYTITRQDGDQHSFSIADRDAYTGVTASWLNTKQPKPKKVKLQRKPKEQHLRALQHPKAKPGSSKKPGKPAEEAKGDYLVGADDNVFAITKIYATKAAAMRAAQAKWEKLQRGVAEFSLSLAMGRANITPETPVRVSGFKAAIDAQDWIVSKVTHNLSNGGFTTALEFEVLLSDVNYEVT*	common_virus_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0012	persistent	direct	high	1148	0.999	GCA_017299035.1_04264
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4432024	4432509	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	11679	12164	GCA_017299035_1_1_4126	GCA_017299035_1_1_4126	-	5117340	.	COG3499	Phage protein U  [Mobilome: prophages, transposons]. 	MMLTLGLFVFMLQTLPYQSMSRNAEYRWPSNGRVGLRPAAQFLGMDEEKITLSGVLLPEITGGRWSLLTLQLMAEQGRAWPLIEGTGTIYGMFVIESISETHSEFFADGSPRRTEFTLNLKRVDESLSAMFGDLRQQAGELYDKVGEMAGKAAGAMGGLLS*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0013	persistent	direct	high	485	0.998	GCA_017299035.1_04265
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4432514	4435360	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	12169	15015	GCA_017299035_1_1_4127	GCA_017299035_1_1_4127	-	5117340	.	PFAM:PF10145.8	minor-tail-protein	MSKSLQLQVLLKAVDQATRPLKSIQQASKQLAGDIKTTQQTLKALDAQSARIDGFRKAQGQLAVTGRALKNAKAEAAALAVQFKATEKPTAQQARLLEASKRAAAELQTKYNGLRQSVQRQRDALNADGIATRNLSAEQRRLKASASEATTALGRQRGELDRLSKKQEQVNRVSARYRAGQSATAAVRNTSAAGLGIATAGLVAEGAFIAPGVQFDRQMSDTQATLGLAKDDQQLAAIRQQARDIGATTAFSPTDVARTQSVLAKSGFNGDAILKSTESTVNLALASDLDIADAADIITNMQSAFNMPIDEIQRVADVMTKGFTSSNSNLMDFGEAMKYVAPIAEAAGASIEDTTALLGVLADNGIKGSMAGTAASAMFTRLQAPVGQAADALSELGVKTKDGKGNMLPIANILKKINGSFKANKLGTAQQAEYLKVIFGEEAMKGAIKLIDAAGNGKLSEKHNTVTQSKGATAQIARVKVDNLDGDLKNLFSAWEDVRIEVFDGQNSALRALTVSATEWLTKAGAWVKANPELVGTLVKVTAGVTALIGGLAALGLIAWPVMAGVNMLIAGAGLLGTVFTTVGAGIAAVFSVITLPVVAAAAVIAGVALTIRKYWEPISAFLTGIGEGFSAAFAPMRAALVPLAGAFTPLLNMVRNVWQWFGKLIEPVKSSQAELQTAARYGRMFGEWIAAGLSLPLQLLGGLPGLLTGIWGVASGIAERAAAVWDTIGERVNAAWLALSAATVQAWDRLTGWLNGKWEGLVNGAKALPGQFKEAGMNMINGVIDGISERWQALKDKFAGLTDMLPDWMKFGDDEAEVNPSISYNRPAPELMPGPGYAGAFDKGGIIPSGQFGIVGERGPEIVNGPANVTGRRKTAALSAAMLSLSTPVMASAPAAAPATAPAPITIQVYGAPGQDAASIAREVSRQLEAERRKHAAAARSRMNYEG*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0014	persistent	direct	high	2846	1.0	GCA_017299035.1_04266
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4435508	4435789	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	15163	15444	GCA_017299035_1_1_4128	GCA_017299035_1_1_4128	-	5117340	.	PFAM:PF10109.8	tail-assembly-chaperone-protein	MKDAKENTVTLETPIQRGETTITEVQVIKPNAGALRGVGLAAIANADVDALLVVLPRVTVPNLTKEECARLELPDLVALAGKVVGFLSPNSAA*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0015	persistent	direct	high	281	0.996	GCA_017299035.1_04267
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4435844	4436353	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	15499	16008	GCA_017299035_1_1_4129	GCA_017299035_1_1_4129	-	5117340	.	PFAM:PF04985.13	tail-tube-protein	MALPKKLKYLNLFNDGYSYMGVVSSLTLPKLTRKLEKYRGGGMNGAASIDMGLDDDALAVEWSMGGIDELVLKQWGAVDAVPLRFAGSFQRDDTGEVSAVEVVMRGRHKEIDFGEYKQGEDTETKVSTECTYFKLTVDGKELIEVDTVNMVEKVNGVDRLAEHRKAIGL*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0016	persistent	direct	high	509	0.998	GCA_017299035.1_04268
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4436369	4437538	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	16024	17193	GCA_017299035_1_1_4130	GCA_017299035_1_1_4130	-	5117340	.	PDB:3J9Q_C	sheath-tube	MGDYHHGVRVVEINDGTRVISTVSTAIVGMVCTAEDADTSVFPLDTPVLITDVLAASGKAGKKGTLAASLRAIAEQAKPVTVVVRVATGKDAAETTSNIIGGANAEGRYTGMKALLSAQAELGVKPRILGVPGLDNQEVATALAGICQQLRAFGYISAHGCKTVQEAIKYRDNFSQRELMLIWPDFVSWNTTANQSDIAYATARALGLRAKIDTETGWHKTLSNVGVNGVTGITASVFWDLQAPGTDADLLNQACVTTLIRKDGFKFWGSRTCSDDPLFLFENYTRTAQVLADTMAEAHLWAVDRPVTPTLVRDMIDGINAKFRELKSAGLIIDGTCWYDESANTKETLKAGKLFIDYDYTPVPPLEDLTLRQRITDRYLATFAASVNR*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0017	persistent	direct	high	1169	0.999	GCA_017299035.1_04269
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4437877	4438023	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	17532	17678	GCA_017299035_1_1_4131	GCA_017299035_1_1_4131	-	5117340	.	.	hypothetical protein	MLKKMPHDGAKFRDDSYMNYLHVTTRGVCRLLATLYHFGGGNKQKVLK*	.	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0018	.	unmatched_CDS	none	0	0	.
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4438268	4438486	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	17923	18141	GCA_017299035_1_1_4132	GCA_017299035_1_1_4132	+	5117340	.	PF10684.9	Putative biofilm-dependent modulation protein	MSIHYLTDSETQNLEKVSIVLGRCVIDLLVRKKIVNTDNILSQIVAEMEKSSDSDEFQLYRTTLEFVGTLSK*	hhsuite_tools	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0019	persistent	direct	high	218	0.995	GCA_017299035.1_04270
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4438503	4438601	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	18158	18256	GCA_017299035_1_1_4133	GCA_017299035_1_1_4133	+	5117340	.	.	hypothetical protein	MKNEIATAITIGSILLFVILIGAPNVVTTMVP*	.	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0020	.	unmatched_CDS	none	0	0	.
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4438655	4439200	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	18310	18855	GCA_017299035_1_1_4134	GCA_017299035_1_1_4134	-	5117340	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MKNIKNFQLGEPKTPEQLKLRNQHNAMFLFSDDGQEWYYCQKDFAEDTIKVAYDEKGIIRSIAANNDISTLWPVGLSVAEVANTTANRRADISGGWVFDGKAIVKRSYSPDEYQEQAKKEQVARIAAVARHIAPLQDAVDLDMATEEEKTMLADWKKYRVMLNRLDMTSAPEIDWPVAPAA*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0021	persistent	direct	high	545	0.998	GCA_017299035.1_04271
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4439202	4442033	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	18857	21688	GCA_017299035_1_1_4135	GCA_017299035_1_1_4135	-	5117340	.	PFAM:PF12571.7	tail-collar-fibre-protein	MSKYKAIITTAGAAKIAAASAGGTQLKIVSMAVGDGNGTLPTPNPAQTKLVNEKCRAALNGLTIDKALKNHILAEMIIPANVGGFWLREMGLYDEAGTLIAVSNMAESYKPKLEEGSGRTQTLRMILIVSSTEAIQVIAGGDTVLATKDFVADAIAVHEKTRNHPDASTTAKGLVQLSSATTSTDETKASTPKALKTVSDASMKKAANLSDLPDKAAARGNLALGTAATKNVGVAGGQLMEVGAFGLGSGSRHREDAYCNQGEIYRVNGSSKNAPGGDVYGVLSLPCDGGPSGAYMAVQNNGNAFFGRSNIAENGVTWFQAYTTKFKPTAADVGAWSKKESDGRFVKQSGDTMSGPLALPRVVFPNENTANADTDVNRENGFTVESLVATTNKGYPVPGGMGVLFTGKVNEFRNVQFAVGSGDLAFYLRSLRKDSPASTRWAQVYTTDYKPTAADVGALTDAQAAQKYALRSIKVNGKPLSTDVNLLAGDVNAWNKTEADGRYVKRTGDTMSNTLNLPRVAFPSESAPPVNADDDLTRPNGFTLEQLAAQSKGYPMNGAVGNLLTFKLNRYRNVQFAIGSGNTDFYLRSMRDDNPETAKKWARVYTTDFKPTLTDVKAADHSNNFAARMGVSRVLTGNNAPTSAGVWSAENSSWAAVPWGSVLCTTNASDLSTASGNGKFQHYLQLAHEAGGKPGLRAAVNVNGTFSGWDSVMMSRGGTFTGVVKTNAEFQSTSSDNYRLIGGDYGSFWRNDGNALYLMLTNAKDQYGPWNNLRPFSVDVKTGNVTFAHFVGINDSLTVNKYIRADKNISVGEDLWVDRNATVAGTLKVGNSTHASDGNIMGSRWGNKWLWDAVIEQVNGRVDWPSFNQHVGARATIDWVNQNFIQNVRYSAEMHVGATGIYTYHDNTVLTGFNNKDGDYSAEELFWSYIQIYKNGQWITVGR*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0022	persistent	direct	high	2831	1.0	GCA_017299035.1_04272
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4442043	4442576	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	21698	22231	GCA_017299035_1_1_4136	GCA_017299035_1_1_4136	-	5117340	.	PFAM:PF09684.9	Tail-protein	MTNRLLPVGSSPLEVAAAAACAELERVPVPLRDLWNPKTCPVHLLPYLAWAFSVDRWDEAWPEDVKRGVVSAAFYIHRHKGTIGAVRRVVEPLGYLINVIEWFHTDGADPPGTFRLDIGVLETGITEEMYQEMERLIADAKPLSRHLIGLNILQDIPGRIYTGAAAIDGDVITVYPG*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0023	persistent	direct	high	533	0.998	GCA_017299035.1_04273
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4442569	4443477	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	22224	23132	GCA_017299035_1_1_4137	GCA_017299035_1_1_4137	-	5117340	.	CDD:PHA02568	baseplate-assembly-protein	MATIDLSQLPAPIVVEVLDYEDILAERKATLISLYPEEQREAIARTLALESEPIVKLLQENAYREVILRQRVNDAAKAVMLAYSTGEDLDQLGANFNTPRLVIAPADESTIPPTPAVMEADEDYRLRLQDAFEGMSTAGSAGSYRFHARSADGRVADVTAISPSPANVTVTVLSRDGDGTASPELLQVVRDALNDEDVRPVADRVIVQAAKITRYGIDATLFLYPGPEVAPILTEAKQRLQNYVLTMRRLGRSIRRSGIIAALTVEGVERVEVAQPAADIVLDKTQAGYCTGVNITPGRADD*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0024	persistent	direct	high	908	0.999	GCA_017299035.1_04274
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4443482	4443832	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	23137	23487	GCA_017299035_1_1_4138	GCA_017299035_1_1_4138	-	5117340	.	PDB:5IW9_B	Baseplate-wedge-protein	MNSAKYIGMNRGTGRTLTDIEHIRQSVADILITPQGSRPMRRAYGSLLSELLDQPQNDALRLQIMAACYSAILAWEPRVKLTGIAFNTTYDGKMVIDITGTRTDAPGALSLSVPVS*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0025	persistent	direct	high	350	0.997	GCA_017299035.1_04275
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4443829	4443969	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	23484	23624	GCA_017299035_1_1_4139	GCA_017299035_1_1_4139	-	5117340	.	.	hypothetical protein	MKTLSVILATLVSRLGAAIALSGAVMLALNGVSGWGWFLFIGLLLS*	.	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0026	persistent	ambiguous	low	5	0.035	GCA_017299035.1_04275
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4443980	4444609	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	23635	24264	GCA_017299035_1_1_4140	GCA_017299035_1_1_4140	-	5117340	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MNNQHDILRLLRNLIRIGTVSTVDLDNGLCRVETGGNLTDWLNWLTCRAGRTRSWSAPSVGEQVLIFALGGELDTAFVLCGIFSDDFPAPSASADALHIAFPDGAVIEYEPETGALSVSGIKTADVQASESITASTKVVIVTADKITLDAPEVVCTNKLTTGTLEVKKGGAMHGNIEHSGGSFSSNGVVVDMHTHGGVQTGGGRTDKPS*	common_virus_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0027	persistent	direct	high	629	0.998	GCA_017299035.1_04276
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4444683	4445129	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	24338	24784	GCA_017299035_1_1_4141	GCA_017299035_1_1_4141	-	5117340	.	PFAM:PF05069.12	Virion-morphogenesis-family	MSELNPFDTLLAGLIAKLSPQSRKSLAVAVSKRLRAGQQQHIKRQQAPDGTPYAPRKTRLRNKKRLRDRAMFSKLRTARYLKAQGNSDAAVVEFVGRVKRMVNVHHYGLRDRPTPHSEAVKYEARPLLGFGPDDVKIIETAVIEHIAE*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0028	persistent	direct	high	446	0.998	GCA_017299035.1_04277
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4445116	4445589	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	24771	25244	GCA_017299035_1_1_4142	GCA_017299035_1_1_4142	-	5117340	.	PFAM:PF06891.10	tail-completion-protein	MLKPQQLRAELTRCLPWLQRNPENLQVRVDRGNVAATLAVSLSHEYRYTLNLLFLDYTGDLDLIMVPIQAWLRENQPDIMATEEKRRTGITFASDFNNNGSYDFSVSLQLTERVVVSEQNGALHVKHLPEPPLPEDITRPMQLFVHGELVSEWNERA*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0029	persistent	direct	high	473	0.998	GCA_017299035.1_04278
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4445685	4446113	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	25340	25768	GCA_017299035_1_1_4143	GCA_017299035_1_1_4143	-	5117340	.	CDD:TIGR03495	phage-lysis-regulatory-protein	MSRAIGWFLVLALIVAGWMKWQVVTLGERLESARQENGRIAAALTDTRAAIDTLQAAVGVLAQEEEKLRGDLNAAHRLALTREQKIQRLLNENQQLRDWFNTALPADVARLHQRPGFTGAADYLRWLSESESVPNPGQPPGD*	common_virus_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0030	persistent	direct	high	428	0.998	GCA_017299035.1_04279
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4446110	4446622	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	25765	26277	GCA_017299035_1_1_4144	GCA_017299035_1_1_4144	-	5117340	.	CDD:cd16901	P1-lysozyme	MNSIAKRCSVAAVLALAVLLPQFSALQISEAGLRLLADFEGCRLSPYQCQAGVWTSGIGHTAGVKPGAVISERQAAVNLVADVYRVERGIGRCMPVTMPPPVYDAVVSFAFNVGVTAACGSTLAGFIKRQDWRNACLQLPRWVFVNGVKSPGLERRRAAELAHCLIGATP*	common_virus_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0031	persistent	direct	high	512	0.998	GCA_017299035.1_04280
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4446606	4446815	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	26261	26470	GCA_017299035_1_1_4145	GCA_017299035_1_1_4145	-	5117340	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MEKITSWVAYTVAAFLAWIGRYSPQDIAFMVGAAVGVGTFLVNWYYRRKSYQLLNKLGVSRRVYDELNR*	mmseqs_cdd	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0032	persistent	direct	high	209	0.995	GCA_017299035.1_04281
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4446818	4447021	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	26473	26676	GCA_017299035_1_1_4146	GCA_017299035_1_1_4146	-	5117340	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MRVYALQGDTVDAICWRYYGRTQGVVEQVYSLNEGLAAAGAILPHGHPVELPDVTAAPQRETVNLWD*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0033	persistent	direct	high	203	0.995	GCA_017299035.1_04282
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4447021	4447509	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	26676	27164	GCA_017299035_1_1_4147	GCA_017299035_1_1_4147	-	5117340	.	PFAM:PF05926.10	head-completion-protein	MSTVVIQRPRPDAPAPRPEDEPIVKNVFFWPDIDPADVRDVMRIEGTITAPRLRLAIKSAIAEVNAELFTFRRDQMADGYQRLEDVPGEQLDGESVRVSEYRNAVSAMTMATLSEQYRSFDTTATGGRKADVVEASIGELWRNARNAISNVAERSHCIIGLL*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0034	persistent	direct	high	488	0.998	GCA_017299035.1_04283
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4447603	4448262	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	27258	27917	GCA_017299035_1_1_4148	GCA_017299035_1_1_4148	-	5117340	.	PFAM:PF05944.11	small-terminase	MTSPARRHLMRQSAVEAAQRENDPLRHANGYERMMLKLNEDKRKLKQVRSQERKAELKRQLLPDYAPWVAGVLAEGRGAQDAILMTVMIWRLDAGDIPGALDIARYALRYQLVPPGNFARSTPYLIAEDVAESATRAFEAGEPVNIDHLTQTMELTDAEDMPDQVRAKLHKITGYVLRAAGRAELALNHLKRALQLHNGCGVKKDIERLERAIRTAASR*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0035	persistent	direct	high	659	0.998	GCA_017299035.1_04284
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4448265	4449476	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	27920	29131	GCA_017299035_1_1_4149	GCA_017299035_1_1_4149	-	5117340	.	PFAM:PF05125.11	Major-Capsid-protein	MRKQTRFKFNAFLSRLAELNGVATGDLDKKFSVEPSVTQTIMTRVQDSSTFLTRINIVPVPEMKGEKIGLDVSGTIASTTDTAGGDERETADFATLDADGYFCQQVNYDFHIRYNTLDLWARYQDFQTRLRDAIVKRQALDRIMIGFNGTHRAKTSNRVKFPLLQDIAPGWLQKYRENAPGRVLDKIVGIDGNVESENIRVGVGGDYANLDALVMDATNTLIAPWYQEDPELVVICGRQLLADKYFPLVNQEQPNTEALAADLIISQKRIGNLPAVRVPYFPADALLITRMDNLSIYWQEDTHRRHMVENSKRDRIENYESINEDYVVEDYACGCLVENIELLAVKPTEPKTKAALPTSGDDIKALAGAIVEAVKVATAPAEPVAEVKDPEEAPADDKAKGGK*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0036	persistent	direct	high	1211	0.999	GCA_017299035.1_04285
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4449519	4450334	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	29174	29989	GCA_017299035_1_1_4150	GCA_017299035_1_1_4150	-	5117340	.	CDD:pfam05929	capsid-scaffolding-protein-serine-peptidase	MAKKVTKFFRIGVEGDTVDGREIGAADIQQMAATYSPKVYGARINMEHIKGILPDGYFRRYGGVVELKAEKIDEPDEPLLHGKWALYASLAPTDDLVSMVGAGQKVFTSMEIRRDFAKTGKSYLVGLAVTDDPASLGTDMLEFSRRHENVEFSAPLEVCFDFGPNADPETSFSARIKAMFSRKQATDDARFGEMEGAVMTVAEQLQEADTRFTEKFAALSEQVADLKQQVKTGSDAFSALQAQLSTSEDFSQQARPDATGGNSAQDVLTDC*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0037	persistent	direct	high	815	0.999	GCA_017299035.1_04286
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4450351	4452249	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	30006	31904	GCA_017299035_1_1_4151	GCA_017299035_1_1_4151	+	5117340	.	PDB:4IDH_A	Large-Terminase	MVIGFGASFGGMAARLNALRLEDLRHNKGLMRAARRFRSLGGMHTTQATTIISDPRRQAALLYWQGFSVRQIAETLNLKGPTVQSWKLRDKWDDIAPISRVEQSMEARLIQLIMKDVKEGKDFKEIDLLGRQIERLARVNRYSATGNEADLNPNVANRNKGERKPAERNVFSEAAVEKLQCIFTETTFEYQMGWYRAGLQHRIRNILKSRQIGATFFFAREALLDALTTGRNQIFLSASKAQAHVFRNYIIDFARLVEVDLKGDPMVLPNGARLMFLGTNVRTAQSYTGNLYLDEYFWIPKFQELRKVASGMSLHKRWRTTYFSTPSSLAHSAYPFWSGELFNKGRRSKADHVQLDLSHSHLSKGVLCGDGQWRQIVTVEDALTGGCNLFDLDQLSLEYSPAEYQNLLMCEFVDDTASVFPFAELQGCMVDTLEEWEDFNPYAVRPFGYRPVWIGYDPSEANGGDSAGCAVIAPPMVAGGKFRVLERHQWQGMNFADQAQKIKDLTEKYCVEYIGIDATTVGQGVFQLVREFFPAAREIKYTPEIKTAMVLKAKDTIGRGCLEYDTSHTDITAAFMAIRKTMTASGARSTYTASRSEEASHADVAWAIMHALLNEPLTAGSGHSSPNILEFY*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0038	persistent	direct	moderate	1808	0.952	GCA_017299035.1_04287
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4452249	4452935	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	31904	32590	GCA_017299035_1_1_4152	GCA_017299035_1_1_4152	+	5117340	.	PDB:4ZNK_A	Large-Terminase	MKYAFTAQQLADLKSLLNTMATPYQRRWYAEGLAHRSRSYTKHRQAGADMFFALEGLIDALETGRNQHYFAPLLKYSLAWSRKYICHFAAKVGIHIAQDDSKITLTNGAEIAFHGGLGLSLAALHGNVYLSEYAWANHPYAIFQSALAVSCHSRYRLTLFTSVSPNPEAFAVWKRSQAKGFSQVHTIENTAAQGGLWDMQDVENLKRECTAEEFRQLYLCEWPQEVAL*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0039	persistent	direct	high	686	0.999	GCA_017299035.1_04288
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4452932	4453966	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	32587	33621	GCA_017299035_1_1_4153	GCA_017299035_1_1_4153	+	5117340	.	CDD:PHA02536	portal-vertex-protein	MSKRKGRKALTTPAPAQPAEQKQDFEAFTFGEPSAVLDKREILDYIECTTNGKWYEPPISFDGLARSVRAAVHHSSPMYVKRNILASTFIPHRLLSQQEFSRYALDYLVFGNAYLEERQNRLGAPLQLKSSPAKYTRRGVDRGAYWFVQDWKEAHRFKTDSVFHLIEPDINQELYGLPEYLSALNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSTSDVDRMRQAMRDTKGLGNFRNLFMYAPNGKPDGIKILPLSEVATKDDFFNIKNASRDDLLSAHRVPPQMMGIIPNNTGGFGDVKKAAQVFVRNELTPLQERMKEVNDWIGEEVIRFAPYELPTE*	hallmark_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0040	persistent	direct	high	1034	0.999	GCA_017299035.1_04289
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4454011	4454355	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	33666	34010	GCA_017299035_1_1_4154	GCA_017299035_1_1_4154	-	5117340	.	COG4226	Predicted nuclease of the RNAse H fold, HicB family  [General function prediction only]. 	MMNNTLKIDGHTAVINFDPEIEMFRGEFVGLNGGADFYAYSVDELKKEGAISLAVFLDECHKDGIEPYKSYSGKVTTRLSPERHQALAIAAQATGQSINELLNEGVDLVIEKHS*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0041	persistent	direct	high	344	0.997	GCA_017299035.1_04290
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4454976	4455206	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	34631	34861	GCA_017299035_1_1_4155	GCA_017299035_1_1_4155	-	5117340	.	.	hypothetical protein	MRRDLNLAGAFMEALNFNENGKGRRIKTVDFIHAANRLGTHLTPEEANYYIKHQSGHVFRLIDEGRYQHNTYLFLC*	.	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0042	persistent	direct	high	230	0.996	GCA_017299035.1_04291
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4455221	4455445	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	34876	35100	GCA_017299035_1_1_4156	GCA_017299035_1_1_4156	-	5117340	.	PFAM:PF06183.12	RecA-filament-binding-protein-DinI	MHTVIKHRRERVQAVDEVVVLERIELIARLGVCYESQAKDKDIALIWISELAGEMKTSITPEKAEVIRQLAAIS*	phrogs_hmm	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0043	persistent	direct	high	224	0.996	GCA_017299035.1_04292
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4455484	4457700	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	35139	37355	GCA_017299035_1_1_4157	GCA_017299035_1_1_4157	-	5117340	.	PFAM:PF05840.12	Rep-protein	MSQAATAYAYPWNEPRPAVAGPVRPLTRDEHAQGQAVLTNIRRLPRFLSAMFLTRYTNLLKSKGLHDANKWLVFQFDRRIWPRLQTVSAKNAMNLAASMRFSAEVDNYASLPGMDDKELRRLADRVAGQLLQNYEDYCDEFVAENGGDNAGLFEDATQSEFYGRIAGMARAFNITPMHWRKYRKGKLDARSAIASLSRLVNSEWWERLFKAQRTQWREALLIALGNVNRGASSYASRQAIRDVKARRQSNFDYLNSRELENVETGERFSLIDKVMASISNPEIRRKELMTMIAGVEQAAAIRGDKGMFITLTTPSKYHPTRAVGKNSPKVHFNHKWDEEAYTPKDGQRYLVKLFSKIRTAFKDAGLQVYGVRVVEPHHDATPHWHMMLFTSKKQRQQVIEIMRRYAMAEDGDERGAAKNRFDCKHLNRGGAAGYIAKYIAKNIDGYALEGERDHETGELLTDTAAAVTAWASTWRIPQFHFIGLPSRGAWRECRKIRFVSLAEEFDERVEAVRAAADAGLFADYILAQGGPNVARDDQTVRVARRVADERNAYDEEVQKIAGIFAPHIGADRVYETRTTQWRIVAKAVAVEPLTLKSASGAPRSPVNNCGLVGSGGAENTQDGEPVESVAVMEHHPDTPIDWDDMTVARSVMTRLRANAPQINRQQRGIDPHKRIEPAASARLTTDEHDRVTRIYSELALHGIEPTRWELEALARGAKVKFGDISMHYPVVSDSAGFQ*	rep_hall_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0044	persistent	direct	high	2216	1.0	GCA_017299035.1_04293
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4457697	4458011	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	37352	37666	GCA_017299035_1_1_4158	GCA_017299035_1_1_4158	-	5117340	.	pfam12961	Domain of Unknown Function with PDB structure (DUF3850). The search results from NCBI sequence alignment indicates a conserved domain belonging to ASCH superfamily. Dali searching results show that the protein is a structurally similar to the PUA domain, suggesting it may be involved in RNA recognition. It has been reported that the deletion of PUA genes results in impaired growth (RluD) and competitive disadvantage (TruB) in Escherichia coli. Suggestions have been put forward that, apart from their usual catalytic role, certain PUS enzymes (e.g. TruB) may also act as chaperones for RNA folding. The interface interaction indicates that the biomolecule of protein NP_809782.1 should be a dimer.	MLHDLKIKPSYFNFVRAGVKKAEFRLNDRDFKEGDLLKLREWLEDANGYTGEFIIAKITHITDVSEWKTDYVVLSIQILQDSLCVNCLERYCGNCAHANGAKVQ*	mmseqs_cdd	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0045	persistent	direct	high	314	0.997	GCA_017299035.1_04294
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4458138	4458362	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	37793	38017	GCA_017299035_1_1_4159	GCA_017299035_1_1_4159	-	5117340	.	PHA00080	DksA-like zinc finger domain containing protein	MADLMDYEQERQALVLEAQITNARKSSALPSAFVCEECDAPIPAARRAAVPGVDTCVSCQQIRETQSHLYAGKA*	mmseqs_cdd	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0046	persistent	direct	high	224	0.996	GCA_017299035.1_04295
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4458362	4458604	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	38017	38259	GCA_017299035_1_1_4160	GCA_017299035_1_1_4160	-	5117340	.	pfam10809	Protein of unknown function (DUF2732). This family of proteins has no known function.	MSNVIFMGLDPAKQGSDISQVAVLLDHARLDERKNQADLAAARLVRLAAHISKNGLTAIEAVELLRQEAEAIEHQAQELH*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0047	persistent	direct	high	242	0.996	GCA_017299035.1_04296
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4458668	4458970	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	38323	38625	GCA_017299035_1_1_4161	GCA_017299035_1_1_4161	-	5117340	.	PF17282.2	Family of unknown function (DUF5347)	MLLATETQKAIGIKRISQIKRELFPHKRNQAQEAFDKSPEHIRRTVCFHAGLKERHIKMKFAEMSYSERKQIVWALNDLIDLSKTLPRFISDDDCELNVN*	hhsuite_tools	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0048	shell	direct	high	302	0.997	GCA_017299035.1_04297
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4459172	4459681	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	38827	39336	GCA_017299035_1_1_4162	GCA_017299035_1_1_4162	-	5117340	.	pfam06892	Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	MFDYAISKHPHFDEACRQFPARHNVTALAKQLGMNAQTLRNKLSPGQPHQLTCAELLAITDATEDSSLIDALLAQINCMPSVPVNEACAGNIPTYALQATAAVGNVAAAAVQGDHKTPVRKSALLESVNTAIRHLSLIGLTVQNRIQSTPALASTVDVISGLSAVAGLS*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0049	persistent	direct	high	509	0.998	GCA_017299035.1_04298
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4459713	4459976	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	39368	39631	GCA_017299035_1_1_4163	GCA_017299035_1_1_4163	-	5117340	.	PFAM:PF11112.7	Cox-like-excisionase-and-repressor	MASEIAIFKVPAPIVTTEQFAELEGVSLRTVYRWTTGDNPQLPIEPRTIRKGCTKAGGPIRIYYARWKEDQLRKALGHSRFQLVIGA*	phrogs_hmm	hypothetical_protein	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0050	.	unmatched_CDS	none	0	0	.
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4460013	4460699	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	39668	40354	GCA_017299035_1_1_4164	GCA_017299035_1_1_4164	+	5117340	.	pfam16452	Bacteriophage CI repressor C-terminal domain. The C-terminal domain of the CI repressor functions in oligomer formation.	MVIRLPTFAINYLRFSRILMRKSRNSQYVDTNFMEIDSGISNEHVLDRICDVYGYAQKIQLARHFNIAASSLQNRYTRGSISYDFIVHCALETGADIGWLLTGKGDKFANGKTAAAFKTEDLFIKTFTLSEGKLVDESEMRISKSLFSRVPLNPQCLRSDNVIHFLELEASLSDGSWLVDIEGAKSIRELTVLPGKKLHVAGGKVPFECGIDEIKAIGRVVGIYSEVN*	mmseqs_cdd	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0051	persistent	direct	high	686	0.999	GCA_017299035.1_04299
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4460699	4461766	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	40354	41421	GCA_017299035_1_1_4165	GCA_017299035_1_1_4165	+	5117340	.	PDB:5C6K_B	Integrase	MAVRKNPAGGWVCELYPNGAKGQRIRKKFATKGEALAFEQYTTQNPWQEEKEDRRTLKDLVDAWYSAHGITLKDGLKRQLAMHHAFECMGEPLAYDFDAQMFSRYRERRLKGDYARSNRVKEVSPRTLNLELAYFRAVFNELNRLGEWKGENPLKNMRPFRTEEMEMAWLDRDQIALLLAECKRHDHQDLETVVRICLATGARWSEAEGLKKSQLAKYKITYTNTKGRKNRTVPISQELYDALPVDKKGRLFSDCYGAFRSALERTDIELPAGQLTHVLRHTFASHFMMNGGNILVLQRVLGHTDIKMTMRYAHFAPDHLEDAVKLNPLATSGDKVAIEMANKEQSLANSGNVCQ*	common_virus_hmm	common_virus	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0052	persistent	direct	high	1067	0.999	GCA_017299035.1_04300
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4461966	4462370	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	41621	42025	GCA_017299035_1_1_4166	GCA_017299035_1_1_4166	-	5117340	.	COG1733	DNA-binding transcriptional regulator, HxlR family [Transcription]. 	MNVTDQPRDLRHADCQKISQVLARVGEKWSVLIIMLLANGPRRFTEIKRTINGISQRMLTLCLRNMERDGLVKRTVIAVMPPHVEYELTPLGCSLTVPVIALGTWANEHIADIDAARTAFDAQNSEAGEDVNSR*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0053	persistent	direct	moderate	234	0.578	GCA_017299035.1_04301
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	CDS	4462467	4463075	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	42122	42730	GCA_017299035_1_1_4167	GCA_017299035_1_1_4167	+	5117340	.	COG1182	FMN-dependent NADH-azoreductase [Energy production and conversion]. 	MTLLHIDSSILNEQSVSRQLTAAIAKQLSAAKPDARIIHTDLAADPINHLSSAEFLALQGVEPQDEHVKQAVARNAKLVDDFLAADVIIVGAPMYNFTLPTQLRAWLDRLAVPGRTFRYTENGAEGLAKGKRVIVASTRGGLYGEGTPLAFLDHQETYLRSFFGFLGITDITFVRAEGLALSPENRTVAIDAAAAQIDGLTA*	mmseqs_cdd	nonviral_gene	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_CDS_0054	persistent	direct	high	608	0.998	GCA_017299035.1_04302
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	tRNA	3468783	3468867	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	17611	17695	tRNA-Ser	tRNA-Ser	-	5117340	.	tRNAscan-SE score: 64.6	Ser	NA	tRNAscan-SE	.	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote	cenote	tRNA	3468701	3468773	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C142	17529	17601	tRNA-Thr	tRNA-Thr	-	5117340	.	tRNAscan-SE score: 73.4	Thr	NA	tRNAscan-SE	.	C142	18182	3451173	3469355	GCA_017299035.1|CP071226.1@region_3451174_3469355@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	tRNA	4430324	4430399	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	9979	10054	tRNA-Met	tRNA-Met	+	5117340	.	tRNAscan-SE score: 81.6	Met	NA	tRNAscan-SE	.	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote	cenote	tRNA	4461792	4461853	GCA_017299035.1	CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035.1_CP071226.1	GCA_017299035.1|CP071226.1	GCA_017299035_1_1	GCA_017299035_1_1@C166	41447	41508	tRNA-Leu	tRNA-Leu	+	5117340	.	tRNAscan-SE score: 20.7	Leu	NA	tRNAscan-SE	.	C166	42730	4420346	4463076	GCA_017299035.1|CP071226.1@region_4420347_4463076@tool_cenote_tRNA_0002	.	.	.	.	.	.