core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	248126	248533	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	1	408	GCA_018829755_1_5_234	GCA_018829755_1_5_234	+	627603	.	cd04784	Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators. Helix-turn-helix (HTH) CadR and PbrR transcription regulators including Pseudomonas aeruginosa CadR and Ralstonia metallidurans PbrR that regulate expression of the cadmium and lead resistance operons, respectively. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines which form a putative metal binding site. Some members in this group have a histidine-rich C-terminal extension. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	MKIGALAKALGCTVETIRYYEQQGLIPPPKRTSGNFRQYNEEHLQRLSFICNCRNLDISLSEIKSLLNLENASKQQAEEINRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK*	mmseqs_cdd	nonviral_gene	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0001	cloud	indirect	.	.	.	GCA_003205835.1_02268
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	248547	249089	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	422	964	GCA_018829755_1_5_235	GCA_018829755_1_5_235	-	627603	.	COG0790	TPR repeat [Signal transduction mechanisms]. 	MKLKLFFHIVLLSFSLPVWAMKTVDITASSKMDDQARMNLAQDFANKQQWISVFDIMYPMALEGNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERTARAKDTDAMMMLSNIYRSQNQPEKSLEWLKKAAELGNKEAKQRLSSQP*	mmseqs_cdd	nonviral_gene	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0002	cloud	indirect	.	.	.	GCA_030405845.1_00685
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	249090	249806	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	965	1681	GCA_018829755_1_5_236	GCA_018829755_1_5_236	-	627603	.	pfam14256	YwiC-like protein. The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.	MKLLISNQHGAIVMALVPFIYGMLLANPVWAHVFLLLGWFSLYLMTYPFLNLFKGKNLELYKKWSVIYFAAAVIFAIPALIYNWQVLYFMFAMLPFVAVNIYFTKKKDERNLWNDLAGILIFALAGMGAYYFSDRTFDEKILWVAIYPTLFFIGTTLYVKSMMRERKNPRYFWASVIFHLLCVLIFVVSQQFILALAFVPGLVRAVYLPTKKLSVMQVGLTEFAITAVFFILLLIATL*	mmseqs_cdd	nonviral_gene	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0003	persistent	indirect	.	.	.	GCA_000195005.1_01794
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	249918	250268	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	1793	2143	GCA_018829755_1_5_237	GCA_018829755_1_5_237	+	627603	.	cd06150	This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function.  The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	MTIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAEIGSNKSNILTAQIFLADMKDYAQLNQAWDEWVDHVSPPSRATVEAKLADPRWKVEIVIIATC*	mmseqs_cdd	nonviral_gene	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0004	persistent	indirect	.	.	.	GCA_000186425.1_00972
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	250298	250702	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	2173	2577	GCA_018829755_1_5_238	GCA_018829755_1_5_238	+	627603	.	COG3105	Uncharacterized membrane-anchored protein YhcB, DUF1043 family [Function unknown]. 	MENWTNEIWLTIGIAFIVGLFIGYIIVRLTKGSVKHQAKTEAELKTVKTQLDTQKAQIEKYFAESAELFKTLINDYQKLYRHYATSSNNLLGEKDHKGLFTQQLITATDKSQNEQPRDYSEGTSGLFKENKEEN*	mmseqs_cdd	nonviral_gene	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0005	persistent	indirect	.	.	.	GCA_002091675.1_02108
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	251347	251787	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	3222	3662	GCA_018829755_1_5_239	GCA_018829755_1_5_239	+	627603	.	PDB:2FJR_A	Repressor-protein-CI	MHKHRIDYYDVRAAGLTGFENSDYPEIISSLYLTDEGMAQLVGKKSSGGICLVNVPTDSMEPTIRKGDIVFLDTKVNAYSGDGIYAFAIDGALFIKRIQKLVGGGYRLHSDNKECYDPQDISEDICQSAKFIGRFIRTIHIELVNL*	common_virus_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0006	cloud	indirect	.	.	.	GCA_962720465.1_01317
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	251954	252310	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	3829	4185	GCA_018829755_1_5_240	GCA_018829755_1_5_240	+	627603	.	PFAM:PF15738.4	toxin-of-TA-system	MGKLFMNVIFGSRKLEKKLNSETEILKEYGKICEKKLKMLLYSLRAAPTLQTFHPPYSKPYRCHELKGNRSGELSMDVEQPYRLLFEVNHNPLPTLGAGGLDWSKVTSIRILSITDTH*	phrogs_hmm	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0007	cloud	indirect	.	.	.	GCA_014202695.1_00384
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	252323	253405	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	4198	5280	GCA_018829755_1_5_241	GCA_018829755_1_5_241	+	627603	.	PDB:3DTE_A	IrrE-protein	MSENQFYPDYAILPGEILEFELDSLEMSQKDLSDKTGISKKHINHIIAGKAPITPETAILLERVLGKPARYWLNLEALYQEAVARIADKEKLERYAEWAKQFPNSMLQKLGFIEKHNEITKKVDSLLRFFAIGSPDDYQTVWGNLQVQYRQDNRTKNCPYSSAAWLRAGEIEANKIHCQPYSEKEFKQALSEIRTLTRTTDPKIFIPKLKEICSSVGVAIVFVPCFPNTGISGATRWLSSDKAVIQLSLRYKTNDHLWFTFFHEAAHILLHGKKRIYLEFDGPNNNVEEENEANEFAQKQLIPRSVWGRLITQDQFTENIIKSIAEEIGIAEGIIVGQLQHHKHLAFSTLNHLKVRYTWQ*	common_virus_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0008	persistent	indirect	.	.	.	GCA_000430565.1_01721
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	254234	255424	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	6109	7299	GCA_018829755_1_5_242	GCA_018829755_1_5_242	+	627603	.	CDD:COG4653	Major-Capsid-protein	MLKKLIELRQQKAEKVAEMRAMLDKAEKENRSLDETESVDFDKLKDLVKQLSEEINKYETVADEERNLGAQSNPLETRSTKQFSNDELRHYIKTGELRNLTTANGEDGGYSVIPQLDKEVMKRLTDDSVMRQLCNVVRLPIGAKEYKKLVSAGGATVEHGTEGTARNGTASPKLHEVTIALNSIYAYPKTTQEILDFSSIDVLGWLTDEITETFTETEEVDLTSGDGNKKSKGLLTYERTTENDKVRPFGKLQKIEVAGAAKIEADTLIDAFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDYIWRDGLTTDAPATLLGRPVYFLETMPTGGANQVVIAFGDFKRGYFIVDHETGVRTRPDNLTEPGFYKVHTDKYLGGGVVDSNAIKVIETTA*	hallmark_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0009	cloud	indirect	.	.	.	GCA_900475315.1_00528
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	255469	256035	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	7344	7910	GCA_018829755_1_5_243	GCA_018829755_1_5_243	+	627603	.	CDD:COG3740	head-maturation-protease	MKKEFEIRSVTISTDEENQKLVGYAVKWNSPSQVLYCDFVESFAPKAFSESLASGEDVRALFEHDYTKLLGRTSAGTLKLEEDSIGLRFELTPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVQKAELFEVTVTSIPAYPESSVEIAKRSMVAAKEKTQKHSTALLKQWLDVMEA*	hallmark_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0010	cloud	indirect	.	.	.	GCA_008633025.1_01570
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	256037	257269	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	7912	9144	GCA_018829755_1_5_244	GCA_018829755_1_5_244	+	627603	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSELTTIEELLSYMGVNNTGAGEFVSPQTAESLPAVMNAVTVISEAVASMPCYLYALKEDGRERIYRHPVEYLLNEMPNRSQTPYQFKNTMMRHCLLNGNAYAVIEWNNKGEPISLTPYQPSAVNIFRKVTGEYIYQITDLNGVTKNYLQDEILHLRHSSVDGFMGRSPITVCRETVGLGLAQQRHGAAIMKNGLMASGLISTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRYLIEFDTSDLLRTSQSERFKSYDVAIKASVMCPNEVRRREGLPPYAGGEEFSQAWKQTVEVKRGDEQEPGASDGNHD*	hallmark_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_005157865.1_02279
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	257229	257597	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	9104	9472	GCA_018829755_1_5_245	GCA_018829755_1_5_245	+	627603	.	PDB:2KZ4_A	Head-tail-adaptor	MNKNRGQAMAIMIKAGKYNKVISLQKQVNEQNDYGGIVSKWKTVANIRAAVEPLQGREFFSGAVPLNENTVRIRIRYGTNVDNTMRVKYGNRSLEIMNIIDSKEAHKELQLICKELTGNGGN*	hallmark_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0012	shell	indirect	.	.	.	GCA_001053575.1_00263
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	257584	257898	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	9459	9773	GCA_018829755_1_5_246	GCA_018829755_1_5_246	+	627603	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MAEINLTIDEIKAHLNLDHDLDDELLEAYKVAALEVCQKHIGKTFGEEETEKTIPFTPAIKIGCLMYIAYLYTNREAVTDLANLKPAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0013	shell	indirect	.	.	.	GCA_000259485.1_01314
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	257913	258269	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	9788	10144	GCA_018829755_1_5_247	GCA_018829755_1_5_247	+	627603	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLRRCSYPGCRNKVKSGRCEEHKPKDTRPSSSARGYDHKWSKYREQYLKHHPLCVMCLEQGKYTPATVIDHIKPVENRQSDPLFWVASNHQPLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_900538825.1_00886
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	258407	258784	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	10282	10659	GCA_018829755_1_5_248	GCA_018829755_1_5_248	+	627603	.	CDD:COG3747	Small-Terminase	MTTKNKKKTHNPPSFLDPIAKAIWKERIPQLLERGDIQDADLIHLELYCVNYSLFRAAVEDIHKNGFSIVNSQGTQSRNPALSAKADAEKVMVKMSSLLGFDPVSRRKNPVEVDSTDMIDEILTM*	hallmark_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_003130365.1_01606
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	258792	260459	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	10667	12334	GCA_018829755_1_5_249	GCA_018829755_1_5_249	+	627603	.	CDD:COG4626	Large-Terminase	MAIWHAYAERIQSGEIVACKKIKQAVARYFNDLNNPDYFFDQSAVEKFIAFSKLCPHVKGHLRGEPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTVAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSPLLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEENEIDKQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWTQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLVTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAERFNIKMTGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRLMIEHNGDPVLAWALSNVVMETDANANIKPNKKKAANKIDPAIAFLMSFGTYQLEYGDLIFELSDEHKQALEQFNGLDI*	hallmark_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0016	cloud	indirect	.	.	.	GCA_001059185.1_01417
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	260937	261326	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	12812	13201	GCA_018829755_1_5_250	GCA_018829755_1_5_250	+	627603	.	.	hypothetical protein	MIKSVLSAFGSFVFSALDFLLFLAILLFVGLLVFIFWPILKWPLLAFLIGAIAFFCYLIYKIKEKPKPLEQDEILSSWAEQELQRPIIQRILQKQEENKPFISGTITHIGNDGKETRLGNITINIKNRE*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0017	shell	indirect	.	.	.	GCA_000242295.1_00643
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	261328	261513	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	13203	13388	GCA_018829755_1_5_251	GCA_018829755_1_5_251	+	627603	.	.	hypothetical protein	MENKEYLLSFFVIDNNGNEIDSNIISIEALDERDARTKSMIFLQKRYKGNRWEIESITLAE*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0018	cloud	indirect	.	.	.	GCA_937966185.1_00711
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	261609	262571	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	13484	14446	GCA_018829755_1_5_252	GCA_018829755_1_5_252	+	627603	.	.	hypothetical protein	MGLLPLDFYSLTQAVDFINQKTNSTIKENLLYSYAMEGKIRFLLNIEIKDNQLIKIGRNDTEGFFISDDSEIYFKERSIECEDKIGLHLKDCSSSLSIVHNNEITLDGDDLYLSFNKATITEYKGYIILHPELLDLFCNKSLPQDGVKNTNYLLLDEFNVQTPFEADIFTSFNFRMEYPKYNEDERLYIKHTFRVNFSDIKISYDDLIKLFPSENAWREQANLKQEIAKLKTEILDKEAENKQLKQQISEQNSPILLGVHRNDDLLKIAIEVRNKYWADYPENVKSNLQIRDYIIRDYCVAKTTAEEIEKIACPINRKKN*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0019	cloud	indirect	.	.	.	GCA_001679405.1_01548
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	262745	262948	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	14620	14823	GCA_018829755_1_5_253	GCA_018829755_1_5_253	+	627603	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MSTAQAKPKKLISGKEVTDIVGFGRTKLNLLVNAKQFPQPIRFSQNFVRWDLEEVNTWIEEQKASRA*	mmseqs_cdd	nonviral_gene	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0020	cloud	indirect	.	.	.	GCA_000222045.2_01560
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	262960	263271	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	14835	15146	GCA_018829755_1_5_254	GCA_018829755_1_5_254	+	627603	.	.	hypothetical protein	MNEARKPTQFLKVLHRLILSSISGIDGYAMGMTSARNYISELEREYLSEKLKRTPEKTSDGAGQYYRYEVANAKQLKEVIAIYKVKGGVLLSVEEKRAYSRFE*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0021	cloud	indirect	.	.	.	GCA_937966185.1_00715
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	263299	263982	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	15174	15857	GCA_018829755_1_5_255	GCA_018829755_1_5_255	+	627603	.	PF10554.9	Ash protein family	MRRLNLPKVIFINTLRSFKNMEIITMNLNHKYFNQYEIFFKLFLIEVALQTTVNFGIMNTQSEKVIASRGKLNYLHMANNSTPFNRAFFVRDIRTPKEYADFVFNLNPSILSMVERNEQSLTGCLPYVAVFHLVTFYRPTVESLAVVPENKHMELTQMHQFIFALIRAPQIKIRLLADNEQQARSRFTDGDTLLFVGKINQNPLKNNRALAVLPTLSVSAEMEVAHG*	hhsuite_tools	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0022	shell	indirect	.	.	.	GCA_001810345.1_01375
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	263975	264229	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	15850	16104	GCA_018829755_1_5_256	GCA_018829755_1_5_256	+	627603	.	.	hypothetical protein	MANQIPTHCAIPMPQVGKLHSSISKAKAILALIRNDGGDMDLDGFFTSEEIIQTALSAINDYLEQAEQSSTVDFYFTKGEENEN*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0023	shell	indirect	.	.	.	GCA_003130325.1_01852
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	264219	264425	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	16094	16300	GCA_018829755_1_5_257	GCA_018829755_1_5_257	+	627603	.	.	hypothetical protein	MRTKKIKSFKEPYVPTPDQLEKACKRIKQFLAFAEDYLHTGHYKGLAASIEQIKKAATIRKAARNETK*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0024	cloud	indirect	.	.	.	GCA_003490865.1_00237
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	264412	264915	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	16287	16790	GCA_018829755_1_5_258	GCA_018829755_1_5_258	+	627603	.	.	hypothetical protein	MKPNNPMEQLKQWKAASDKNLVSSGEKRHQLQKAPPVAKGATGNEEQKTEKRKGKLFFNPLALKYSQISRQFQLIQDSNKRCLEVYPGDFHHKIKFRDEIVDLMNKLAGGGNLLNALAKDGNLSREDTAKLKYFNQANKYLLYKFSEVVEQIGALNSERAEQQRGSK*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0025	cloud	indirect	.	.	.	GCA_003253055.1_00604
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	264917	265360	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	16792	17235	GCA_018829755_1_5_259	GCA_018829755_1_5_259	+	627603	.	.	hypothetical protein	MNMNEKLDYSNLNAVELKAIAMSYRNMLENKGETFHSSLPYLSGAIEVLAEELADCPAMNIDELKILHDELLMVNKHLLQMAPKPPSSNPEEIVATLTNDEIIDGLLKNSIALSLVKTFKYFQEVIADRINVIENGVIKGVNNGTIN*	.	hypothetical_protein	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0026	cloud	indirect	.	.	.	GCA_018373215.1_00189
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	265344	267113	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	17219	18988	GCA_018829755_1_5_260	GCA_018829755_1_5_260	+	627603	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQIHEPYSDIFILAGRKAWQAWDNGKGEEWLLLCSLIHGLDSTIKPVILAEKQLENISSIRIVKEDQRSVKLVQYGELAQAEITAICQNLAKTSDAIDVKLLDAAAQTKEDLSAYIQLLRNDKDTADFAEKIVPPEKLKEKDGTNKKSRAFQKWLNLDMALQRGCREIYAYDGKTWNKQENDDLEEKAVKFLDENEFNYSDSTIDRLIKTLKAQLPRMGEMSNDLIAFENGVLNRNTMEFESHNRQNWLTSCIPHKYDKQATDTPHFDKWLSFVSDGNKEKARNILAVLYAILTNRYNWQMFFEITGKGGSGKSVFASIATLLAGVKNTASSNLEKFDDERGLSGLENKTLILCPEQSKYAGDGSGLKSITGGDTVRVRYNYQDPFDVKITALVMLINNRPCSFTERSGGVDRRRVIFDFKKIVPEDERDPHFMDKITLEVGGIIRKVFDSFPDPNDAKKALKAQMESQEALEVKKLSDPLTDFFGYFYTTEQTDGLFIGVTNMGLDKIRTHLYPAYLAYTKAMNIAELGLNNFVIGVEQALKQNGNKHDFMKRHTKTGRRTNIHFKDFDSFRNEMLS*	rep_hall_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0027	cloud	indirect	.	.	.	GCA_001059185.1_01431
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	267285	268505	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	19160	20380	GCA_018829755_1_5_261	GCA_018829755_1_5_261	-	627603	.	PDB:1Z19_B	Integrase	MPRVTKPLTNTEVDKAKPKAKEYNLTDGKGLFLRIKPTGAKAWIFNYYHPITNKRTSFTIGTYPSITLSLARQKREEWLSLIAQKIDPQEHEKEQERIARGENENTFFKVALLWKEKRSREVEPLTMEKNWARLEKYIFNQIGNYSIDDITSPLLIKTVKPLYEKGFNDTLHRLLNLSNQILNYAVTLGLMPFNSCIKAADAYHKEPQKNHPAIKPEALPKLLHDFRNSNRDYLTKMLFLWQLLSMVRPAEAVSVEWSEIDFDKKLWTIPAIKMKKTRQGQFPHTVPLSSLMLKILEELKPLTGDNKFVFSHYSKPNHSASKELIANALRKIGYKGIQDSHGLRSIARTFLENQAVDFRLAESCLAHRVGDKTSQAYNRYDYVELRRPVMQLWSDYCESCGMNLNL*	common_virus_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0028	cloud	indirect	.	.	.	GCA_916856725.1_00204
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	269002	270438	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	20877	22313	GCA_018829755_1_5_262	GCA_018829755_1_5_262	+	627603	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIERAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNIGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQAGLNAKIVAKVERAETVSTDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVTAMAGVCLGAEKMPSINVSRHRMDKQFENIEESVAMSAMYAANHMKGVAAIVTLTSSGRTPLLMSRISSGLPIFALSRHQETLNLCALYRGVTPVSYGEDSRTEAGAKAALQSLKEKGYLSAGDLVLLTQGGQGATETNVCRTLIVE*	mmseqs_cdd	nonviral_gene	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0029	persistent	indirect	.	.	.	GCA_000296405.1_00209
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	CDS	270580	271986	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	22455	23861	GCA_018829755_1_5_263	GCA_018829755_1_5_263	+	627603	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSSDKKTAQISIPPHSLEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGITTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLYIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKSLAKELQVPVIALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYHDDY*	rep_hall_hmm	common_virus	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_CDS_0030	persistent	indirect	.	.	.	GCA_014287575.1_02874
GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote	cenote	tRNA	268699	268772	GCA_018829755.1	JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755.1_JAHKJY010000001.1	GCA_018829755.1|JAHKJY010000001.1	GCA_018829755_1_5	GCA_018829755_1_5@C15	20574	20647	tRNA-Val	tRNA-Val	-	627603	.	tRNAscan-SE score: 70.7	Val		tRNAscan-SE	.	C15	23861	248126	271987	GCA_018829755.1|JAHKJY010000001.1@region_248127_271987@tool_cenote_tRNA_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits