core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	153333	154052	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	1	720	GCA_019334725_1_1_146	GCA_019334725_1_1_146	+	2284668	.	TIGR01222	septum site-determining protein MinC. The minC protein assists in correct placement of the septum for cell division by inhibiting septum formation at other sites. Homologs from Deinocoocus, Synechocystis PCC 6803, and Helicobacter pylori do not hit the full length of the model and score between the trusted and noise cutoffs. [Cellular processes, Cell division]	MKPAFDIKTSRLDVLSIHLHTADLTELEEFLRQLAGQSQDEFVPFILDVQDFDHPESIDLGGMISLFARYGMQILGLHHTSDTWAAAAARYHLVFKQGNSTQAADTQAAPTPRQAPQPQDVQATVINNPTVLVSTPVRTGQQVYAENGDLIVTGIVSQGAELIADGNIHIYAPMRGRALAGAKGNTNARIFIHSMQAELVSVAGIYRNFEQDLPEHLHKKPVQVSLQDNRLVISAIDAE*	mmseqs_cdd	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0001	persistent	direct	high	719	0.999	GCA_019334725.1_00158
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	154079	154894	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	747	1562	GCA_019334725_1_1_147	GCA_019334725_1_1_147	+	2284668	.	PDB:3EZ9_B	ParA;-dna-binding,-winged-hth-protein	MSKIIVVTSGKGGVGKTTTSASIATGLALRGHKTAVIDFDVGLRNLDLIMGCERRVVYDLINVIHGEATLNQALIKDKNCENLYILPASQTRDKDALTREGVDNVMKELASKKMGFEFIICDSPAGIEQGALMALYFADEAIITTNPEVSSVRDSDRILGILQSKSRKAEQGDTVKEHLLITRYSPERVAKGEMLSVQDICDILRIPLIGVIPESQNVLQASNAGEPVIHQDNAAAAEAYKDVIARLLGENREMRFLEAEKKSFLKRLFGG*	common_virus_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0002	persistent	direct	high	815	0.999	GCA_019334725.1_00159
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	154898	155161	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	1566	1829	GCA_019334725_1_1_148	GCA_019334725_1_1_148	+	2284668	.	PRK13989	cell division topological specificity factor MinE; Provisional	MSLLDMLFGRKPKTATVARDRLQIIIAQERAQEGQAPDYLPTLRKELLEVLSKYVNVSLDDIRISQEKQDGLDVLELNITLPEQKKA*	mmseqs_cdd	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0003	persistent	direct	high	263	0.996	GCA_019334725.1_00160
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	155165	156085	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	1833	2753	GCA_019334725_1_1_149	GCA_019334725_1_1_149	+	2284668	.	PRK11151	DNA-binding transcriptional regulator OxyR; Provisional	MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELSVSLFDRSSNDIITTEAGERIVAQARRVLEEAELIKHLANEEQNELEGAFKLGLIFTVAPYLLPKLITALRETAPKMPLMLEENYTHILTESLKRGDVDAIVVAEPFQEPGIVTEPLYDEPFFVIVPKGHHFEELDAVTPQLLGEEQVLLLSEGNCMRDQVLASCSELASKQKIQGLTNTLQGSSINTIRHMVASGLAISVMPATALTENDHMLFSIIPFEGTAPHRRVVLAYRRNFVRPKALTALRTAILQSQLTGVTFVNE*	mmseqs_cdd	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0004	persistent	direct	high	920	0.999	GCA_019334725.1_00161
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	156240	157196	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	2908	3864	GCA_019334725_1_1_150	GCA_019334725_1_1_150	-	2284668	.	PFAM:PF01548.16	Transposase	MNVIGLDVSKDTIDVTLITTKGSKDYIKISNNTEGFENLINWIKTKRIRKIAISMEATGIYYEQAAEYLSALYTIFVINPLKIKEYAKSQFSHTKTDKADSKLIAEFANRHLDKLTPFRPSENPILYKLVNLLQQLKEQQKETQNRLHTAKDIYIKSTHEAIIELLEEKIDQTSKRIEGMIKQKESLNIEYQNLQTIPAIGKETAVILLRHLTDKNFETANKFVAFAGLSPKIEQSGTSVNKKGRLSRYGHRQLKRALFMPALVAYRMNAFPQLVRNLEAAKKPKMIIIVALMRKLAKIAFYIHKTKKPFDKARHQTV*	common_virus_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0005	cloud	direct	high	956	0.999	GCA_019334725.1_00162
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	157493	158671	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	4161	5339	GCA_019334725_1_1_151	GCA_019334725_1_1_151	-	2284668	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLFTGNMGTGKTSRVVSMILNNEDGLFKMKLEDGTEVDRPLYFCHIDGLDKRKFNAHELTEEEIMSAPLRDIIPQGAVLIVDEAHYTYPVRAAGRPVPPYIQELTELRHYGHTVILMTQHPSQLDVFVRNLVSKHTHLERKAVGMKQYTWYKCVTSLDNPAAVTGVESSSWKPPKEAFKYYKSSSQHQKFKKNIPLAVWALVAIFAFMAWKGYNVYQIYKQGSGQSEVVQSVSDSSASEPQAINETDQSKSPQDINSNLKPEDFVPTLAEKPESKPIYDNVRQVKTFEYIAGCVEGGNSGCTCYSAQGTPLKEVTKAMCKDYVKNGLPFNPYKDEQHTVQQTQTAPQTAYTPENGQVLTMGGKSPQNLMYDGYVEAGEKTGFQNGAKVGS*	hallmark_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0006	cloud	direct	high	1178	0.999	GCA_019334725.1_00163
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	158681	158971	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	5349	5639	GCA_019334725_1_1_152	GCA_019334725_1_1_152	-	2284668	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPLLAGLIPLLAILLKMLIVRIIIATGMTFVTYAGYIIALNKFKDYTLNAINSMPSDILNLLLIGGFGQGLGYLFGAFSFYIGMNTLNKLTFIMPR*	hallmark_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0007	cloud	direct	high	290	0.997	GCA_019334725.1_00164
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	158981	160456	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	5649	7124	GCA_019334725_1_1_153	GCA_019334725_1_1_153	-	2284668	.	PFAM:PF05616.12	attachment-protein	MNKFIIPLLVLFTSSFAIAGEIQVNNSKNITYTKQHTEHWDKKPWARSVSDNSYRKFQTEAMKARYEGYLSKQTVSATVEAQVSRKAVLSGAFKLVKSGAALGSRLSGWGTAAYFAYEAYQAVKSDLESEGYKYDESSKEFLKAYADALCQDDPVIQSCVGVDSSVVRALSLGGKSEKEAQQLLIMQVEKDFKNVFPKIKEKRYPDAHFQFCFWSEGVSCQISSGTRFFYAPQKGLHREFLDEDKFLQIATSSIDRNPTPFVEGAGKPEYKENIKVPAGTVVTIGPFTPENGKPVQITITFGQDSNGNTTANVATTQRPDLTPGGSEAPNTKPDPDPNPNPDGKPDKKHDDKPDSDDKPDKRPDDKPDPDDDPSDKDKRKEDKKDDKKEESKGLLCDFFPDILACDKMGKPEEGMFDAISIPQTTDDRTWSSDDFLPPNGVCPQPKSFNIWGKPVQISYEPLCVFMEKVRFAVLLGFIIMSAFIVFGSLRK*	common_virus_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0008	cloud	direct	high	1475	0.999	GCA_019334725.1_00165
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	160449	160757	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	7117	7425	GCA_019334725_1_1_154	GCA_019334725_1_1_154	-	2284668	.	.	hypothetical protein	MFIRIFNLVFFIIYTFHFLNIIFIPNEIRYSIMALYLVINLLGFIQKKSKSNIKFSDNDDFYLMNTIPKKPSPKDPDMVKFMSDLNESIENKKIEKIKVKNE*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0009	cloud	direct	high	308	0.997	GCA_019334725.1_00166
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	160885	161160	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	7553	7828	GCA_019334725_1_1_155	GCA_019334725_1_1_155	-	2284668	.	.	hypothetical protein	MYYQVGNKCLEQSQAENVYFSLVVPQITQDGKIIKPEYNGTLWKLNGQTIKADLPKCDPSDNLKSGLETGWLLFGVMAAVYFVSILKRVLR*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0010	cloud	direct	high	275	0.996	GCA_019334725.1_00167
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	161173	161391	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	7841	8059	GCA_019334725_1_1_156	GCA_019334725_1_1_156	-	2284668	.	PFAM:PF10389.8	major-head-protein	MKLMNTCRKYGAKLAVVAAAPLALATQAYAALDEGAKSSIEAAKTDGLEAGWLVVGVFAALFVIAIVKRLLR*	phrogs_hmm	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0011	cloud	direct	high	218	0.995	GCA_019334725.1_00168
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	161477	161680	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	8145	8348	GCA_019334725_1_1_157	GCA_019334725_1_1_157	-	2284668	.	.	hypothetical protein	MSKYQQKFIVQELENHEFIYPDPFGDIGFTPNIKSAGQYESYEDAFNSAIEEIGGEFLIFSFYTKED*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0012	cloud	direct	high	203	0.995	GCA_019334725.1_00169
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	161694	162005	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	8362	8673	GCA_019334725_1_1_158	GCA_019334725_1_1_158	-	2284668	.	PFAM:PF07459.10	RstB-protein	MFEQSQVTTYSATLLGAKQFKGEIDGNKIDSCTVLVASPMPSNGNAVGFTAASMKFGDSHNFDKLKNLKFPCAVDVTVAMESTGKGLVPKLLDFQVKGATPKA*	common_virus_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0013	shell	direct	high	311	0.997	GCA_019334725.1_00170
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	162018	163376	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	8686	10044	GCA_019334725_1_1_159	GCA_019334725_1_1_159	-	2284668	.	PFAM:PF02486.18	Replication-initiation-factor	MRNVAVKSWEDKAVAVGADMAAALADGNPAPTAEGCPPRLIGGEQNKTPNPKGAEKSDNQDFEFEYFSHFVSDGKGKFIEIPLRRGRDDGAFIDQITLTIHEDSLPKVTGKGLVSDTEFVVKYSELLEEILGFGITQKLPFKGKFFYKSCYQLGPDNVEYGKVHYGGQRETMLVELNGTGCQAAIPGWENRLYEFLSKCIRPKITRVDVAHDFFNGEYTPDQALLDHDNGHFDVHNMRPKSECRGTAWRNDDGSGKTFYVGKRGNSKFTRVYEKGKQFGDVNSPWVRFETEFRAGDIEIPLDVLIYPGSYLGGAYPICTAIFKTESKRMDAKTETVNLSFDHKLFHARNQVGKMVNFLRDIGWDDTKIVDELVKGIEGYPKGLQPEQYDCRDQTQKIQYIHEEQKAIDDLNMQTLLDDLLDEKETAFPQDREKQHIRDIELEEKIISNFLNK*	rep_hall_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0014	shell	direct	high	1358	0.999	GCA_019334725.1_00171
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	163703	163915	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	10371	10583	GCA_019334725_1_1_160	GCA_019334725_1_1_160	-	2284668	.	PFAM:PF02402.15	DNA-methyltransferase	MKKTFAKTVTLIMLAASLGACANMTQTQRNTAAGAVLGGVAGNLIGGDTGSTLGGAALGGVIGSQVHTRY*	phrogs_hmm	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0015	persistent	direct	high	212	0.995	GCA_019334725.1_00173
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	164170	164619	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	10838	11287	GCA_019334725_1_1_161	GCA_019334725_1_1_161	+	2284668	.	PF03653.13	Uncharacterised protein family (UPF0093)	MSIYALAHIIHVYCAIAFVGGVFFEMLVLSVLHTGRVSRESRREVERAMSYRAVRVMPPVVITLFISGIVMVYNRYLPILHHPFDSSFGIMLSIKILLAISVLVHFAIAVVKMARHTLTVGWSKYIHAVVFSHMLFIVFFAKAMFYLSW*	hhsuite_tools	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0016	persistent	direct	high	449	0.998	GCA_019334725.1_00174
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	164653	165627	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	11321	12295	GCA_019334725_1_1_162	GCA_019334725_1_1_162	+	2284668	.	TIGR03718	integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	MTQYPSVGSPMFYGIFFIAVSIMIAIDMVSLKKNGAHKVSIKEALAWSGIWVAVSCTFAGWLYFELAGNPTYGAVVAKEKVLEFFTGYVLEKSLAVDNIFVFLMIFGYFKVEPKFQHRVLLYGVFGAIVLRAIMIFIGAALVQQFEWILYLFGAFLLYTGIHMMKPEAEVEEDLSQNKILTLLKKVIPTSQQFDGEKFFTIENGKRIATPLLLVLIMIELSDIIFAVDSIPAIFAVTTDPFIVLTSNIFAILGLRAMYFLLADFAERFIFLKYGLAFVLSFIGIKMLIMHWVHIPISISLSVVFGALGASILTSLVYTRQQEKK*	mmseqs_cdd	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0017	persistent	direct	high	974	0.999	GCA_019334725.1_00175
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	165691	166089	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	12359	12757	GCA_019334725_1_1_163	GCA_019334725_1_1_163	-	2284668	.	PFAM:PF13406.5	tail-length-tape-measure-protein	MKKLLIAAMMVAGLAACTQEAKKETQEAASAVASDVNAAAENAASAVDAAASEAKGAAEQAVSDVKDAAADAKATADKAVSDAKDAAGKAVEEAKEAVSDAKDAAKDAAKDAMGKAADATQEAADKLKDAAK*	phrogs_hmm	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0018	shell	direct	high	398	0.997	GCA_019334725.1_00176
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	166385	167413	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	13053	14081	GCA_019334725_1_1_164	GCA_019334725_1_1_164	-	2284668	.	PDB:1Z19_B	Integrase	MPIYKRENGVYYIDITTQSGQRIRQSSRTKDKNEAQRLHDKLKHELWQQENFNEKPKRLWDEAAVRWIEEMGDKKSIRDDISRLRCLVHFRGIFLHHMSRDFIMQTINRMTCSDSTKNRYLALIRSILNKAEKEWGWLDNVPKLKLYREAKRRIRWLKHEEAQKLIDALPEYLADMAVFSLATGLRQRNVLGLKWSQINLSRKTAWIEADEAKAGRAIGVALNQTALGILEKRMGKHPSFVFTLPNGKPVKSISSRIWKNALSQAGIVDFRWHDLRHTWASWLVQAGVPLAALQEMGGWENVGMVQKYAHLAPEHLHGHAAILDSVGLGFDTKQAHPNIGGG*	common_virus_hmm	common_virus	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0019	shell	direct	high	1028	0.999	GCA_019334725.1_00178
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	167620	167874	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	14288	14542	GCA_019334725_1_1_165	GCA_019334725_1_1_165	-	2284668	.	.	hypothetical protein	MLIEKSVEVVTVKVSALFNPKDEQFPHFRLVPLEADRQGYLCLLFYIDRNNFLVLESRIKRYAAVRRLSLLQENAPYTVYEISR*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0020	shell	direct	high	254	0.996	GCA_019334725.1_00179
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	167883	168317	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	14551	14985	GCA_019334725_1_1_166	GCA_019334725_1_1_166	-	2284668	.	PF11657.8	Transcriptional activator TraM	MGKAEVDAIIADVFRVSGIKLTADDPVIAILLVQESRLKALFEEQRNRTCEDFDGITSEIEEPLKTAVQIAEDLKTYREQIMADLLAGYGKELAESEGKLYASIQAKIDKQMKGYLDEVTTKINRSWLVAALIFFCSILVLKFV*	hhsuite_tools	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0021	shell	direct	high	434	0.998	GCA_019334725.1_00180
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	168319	169077	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	14987	15745	GCA_019334725_1_1_167	GCA_019334725_1_1_167	-	2284668	.	PRK13886	conjugal transfer protein TraL; Provisional	MKEVHFIAQGKGGVGKSTIASFLGDYLKAKASGEQLHCFDTDPVNPSFSRFSALNPEVIDILNDSNNIDSRYFDGLIEKLVNEEGIAVIDNGAATFVPLMSYMAENEVPSFLAENGIRMIIHVPLVGGQALDDCITGLVQTLNALQAEVVIWLNDFQGVVTKDKPFEEFGVYKQYKDRIIGVVHISHRNPDTFGADIKEMTTKNLTLTEAQTSGEFGLMPRQRLRTVQRELYEQLDQIEFLATQRQPEKSEA*	mmseqs_cdd	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0022	shell	direct	high	758	0.999	GCA_019334725.1_00181
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	169228	169779	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	15896	16447	GCA_019334725_1_1_168	GCA_019334725_1_1_168	-	2284668	.	PRK13893	conjugal transfer protein TrbM; Provisional	MKKSLGLLIAALLGAAPATYADDVLTGDTRLACEAILCLSSGDRPSECASSIRRYFSIRHKKLGNTIKARRNFLKMCPSSSESAEMSGLVDAIANGAGRCDAQELNRMMRYSRFEKVCEQKNKYRFGRQYTSDENCQMVKKFYVRPDKPEYCKAYYDHGWTTAGDKVRYVGEEKNGGRWVDIR*	mmseqs_cdd	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0023	shell	direct	high	551	0.998	GCA_019334725.1_00182
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	169890	170057	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	16558	16725	GCA_019334725_1_1_169	GCA_019334725_1_1_169	-	2284668	.	.	hypothetical protein	MKKIRKPVKQIIIGTYHSMRAASKQVDLLMKGNGDLCVNIVQDGCKFQVRTVVWQ*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0024	shell	direct	high	167	0.994	GCA_019334725.1_00183
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	170191	170817	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	16859	17485	GCA_019334725_1_1_170	GCA_019334725_1_1_170	+	2284668	.	.	hypothetical protein	MPMKNNQKELFENITISVVYGSLLIKSMPLFIFLCVIFSAWQLWENHSEISIKFKWTWKLFVSSALALFIAKIISIHHFNHKYGIYPEYLNYSISVWTIITAITFLTLPILWHILKLMIEGRNAPLFKSFKKGIYAITLLIMWGLIIKAYDKATEYDRWPLMLDAYSYSDCKTSQGSIAIRKDDTTCYRFILSYPLKIEMQEYPSPKP*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0025	shell	direct	moderate	620	0.989	GCA_019334725.1_00184
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	172055	172687	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	18723	19355	GCA_019334725_1_1_171	GCA_019334725_1_1_171	-	2284668	.	PFAM:PF08667.9	transcriptional-repressor	MDIGQNIRARRKELKMTLEQLALEIGSDTGNLSRIERGQQSLTTEKISVIAKALNCSPVDLMSSHIAKDISLPSGYHRIPLLNKQQILDWDKIQSHVEFLKIDEWLITEEIISAQSFSFEINDLSMSPDFQVGDKIILDPTLQAEAGDFVLATSNAQDIFFRKYRARGIIDGKKVFELYPLNEDFEIFHSSHSELKTLGVMVEHRKYRRK*	phrogs_hmm	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0026	shell	direct	high	632	0.998	GCA_019334725.1_00185
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	172800	173015	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	19468	19683	GCA_019334725_1_1_172	GCA_019334725_1_1_172	+	2284668	.	PFAM:PF13744.5	transcriptional-repressor	MTSPLKLARLGRKLTLEQVAELVGSDSGNISRIERAKQIPNRDLAAKLVELFREDGLTEVHLFYPERFETK*	phrogs_hmm	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0027	shell	direct	high	215	0.995	GCA_019334725.1_00186
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	173018	173779	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	19686	20447	GCA_019334725_1_1_173	GCA_019334725_1_1_173	+	2284668	.	PFAM:PF06970.10	replication-initiation-O-like	MLTAEIRHHITTDFVVYREFGLLCGSNIQATTLLSGLFWWSDVADKEPKRQGWFYKTASQLFDEFGLTRRGYEKARKFLSSKGIIQCRRAGVHGRMHWQLNKERLLELCYLVKGKPVPQFNSRYHLDIDNFRLEKWINLDLWNDFLKMRAKKGKSVTIKQKKILLNQLKDLKNKNYDLEAAMRKAILNGWTGFYASDRSPIPSQPTPEAKALKVLAEYEAQIKQSVHPPDTDGQRNPDNPHRQNLQNYYKKKQ*	phrogs_hmm	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0028	shell	direct	high	761	0.999	GCA_019334725.1_00187
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	174377	174760	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	21045	21428	GCA_019334725_1_1_174	GCA_019334725_1_1_174	-	2284668	.	PF17273.2	Family of unknown function (DUF5338)	MSDLEDFIKSYEKKLSPGKRSVLEPYKDEILKMKQLGFTEKLILQFLAEKKNVRVSQQALNRFIRSRLQKMNLGAEKKVEKSQNDNKLTNSKSPVSEPEKPKETLAQSNFGKNKFDWQNPINPKDYK*	hhsuite_tools	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0029	shell	direct	high	383	0.997	GCA_019334725.1_00188
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	175469	175867	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	22137	22535	GCA_019334725_1_1_175	GCA_019334725_1_1_175	+	2284668	.	.	hypothetical protein	MGLDMYGYTMKAEFVGDRQTDVNVSEDEREEAALNHFAYWRKFNHLHGWMENLYRQKGGKAEVFNCCTVRLELEDLDRLESDLNEEKLEYTPGFFFGDDEIYPEDITETKNFIANARLAIATGQAVFYDSWW*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0030	shell	direct	high	398	0.997	GCA_019334725.1_00189
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	175921	176709	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	22589	23377	GCA_019334725_1_1_176	GCA_019334725_1_1_176	+	2284668	.	COG0286	Type I restriction-modification system, DNA methylase subunit [Defense mechanisms]. 	MDNTVKELKKRIYSFGAAYKPSDVFRDFVELAALAIFNSYMRDDDWEIREERYHTIRREYKEEAFKIFPELLGVLASGCIRAVNVGSYEDFLGELYMDLGASNERNGQFFTPMSISRVMAKLAGIDTVEKLENKRFVSLLEPCCGSGANLLAFAEHIADSGKIPSLHMAAVAVDIDVLCVWMCFVQCHFYGIPAKIIHGDSIKNEFHTAWRTVHWLRGGFEDYMKAEIEADKKAAFDAKQHSQDETKITAPLLTLEEQLVLF*	mmseqs_cdd	nonviral_gene	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0031	shell	direct	high	788	0.999	GCA_019334725.1_00190
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	CDS	176727	177035	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	23395	23703	GCA_019334725_1_1_177	GCA_019334725_1_1_177	+	2284668	.	.	hypothetical protein	MIQDVKKVDYDKMFSECLKSKIPTETRLDTEALINLLMLENVSEIEVSIRKGCIRATHFIGSDKKYIYDTGIDDEEIQWEIEDFKAIYPHTWWTVEQVIYND*	.	hypothetical_protein	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_CDS_0032	shell	direct	high	308	0.997	GCA_019334725.1_00191
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	226673	227587	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	1	915	GCA_019334725_1_1_217	GCA_019334725_1_1_217	+	2284668	.	TIGR03639	CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	MTWRSLLIQNGGKLSLQCRQLLIQQNGESHTVPLEDIAVIIIENRETLITAPLLSALAEHGSTLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKKQLWQHIIRQKILNQAFVADETGNDLAAKRLRTLAVEVRSGDTGNREAQAAALYFQALFGEKFTRNDNNAVNAALNYTYAVLRAAVARALTLYGWLPALGLFHRSELNPFNLADDFIEPLRPLADLVVIHLHEQGRLKTDLTSNLKQNLIKTLHCQICIKRQHFSTLAAIDKMISSFQASVTDKNAKQLKLPEILPLKEYQYE*	mmseqs_cdd	nonviral_gene	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0001	persistent	direct	high	914	0.999	GCA_019334725.1_00232
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	227598	227906	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	926	1234	GCA_019334725_1_1_218	GCA_019334725_1_1_218	+	2284668	.	COG3512	CRISPR/Cas system-associated protein Cas2, endoribonuclease [Defense mechanisms]. 	MRIIVFFDLPVTTTAKRKAANQFRQFLLKDGYQMLQLSVYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEVTEKQYATMKLLLGELKTQEKRVNSDQLLLF*	mmseqs_cdd	nonviral_gene	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0002	persistent	direct	high	308	0.997	GCA_019334725.1_00233
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	228279	229253	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	1607	2581	GCA_019334725_1_1_219	GCA_019334725_1_1_219	-	2284668	.	PFAM:PF01548.16	Transposase	MRNTVGLDISAETFDAVALIDGQTAYKKFQNNQDGIESLKNWINGQSIEDGQNIYIIMEATGNYYEAVADNLADDYHVSVINPLKIKRYADYRFNRTKTDKQDAKLIAEFGQNALAKDLPKHKRPSENIQSLKRLLSLQNQLKEQLTAQKNRLKAAKDSFVQQIHQKQIDELNQHLQDVDGQIKQTAKADKAIQETAKRLQTIPSVGQTTAIYLTVHLLTAHFKNANHFTAFAGMSPQQKKSGTSVNGKEKLTRYGNRKLRGALFMAAMVAMRQNYFPDFTKRLQKAKKPKMVIICALMRKLLVIAYHLHKNQTDFDPSRYKQA*	common_virus_hmm	common_virus	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0003	cloud	direct	high	974	0.999	GCA_019334725.1_00236
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	229615	230793	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	2943	4121	GCA_019334725_1_1_220	GCA_019334725_1_1_220	-	2284668	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAAITLITGKPRIGKTAFAVELLMFDDYYKGRKIFSNINGLLIDHHQPPEGHSWEDMYEWLKWKENIGSVVIYDEVQYLFPTRSSGSKMPENVAFLNIHGHYGIDMILITQSPKLLDVNLREVVNKHIHIAANKMGGLTRLEWNEVALNPTQQSRNALSSSHKIREEVLEYYKSAEVHTAHSHVKSRWYYIIIAMLFILPCILGLVGFMGYKMYQGYKEKAGITAKAEAAKEDTGFKNPLDPENQKEMMPQSGIQGQNLKPEDFVPVLAEKPESKPIYNGVRQVKTFEYPVGCVDGGKSGCTCYSSQGTPLKEITKAMCKDYAHNGLPFNPYKESDHSSNQAQTAPSASDTSAGVQVASLGGQSPQNLMYDGYVEAGAKFTPQSGAVVESAQ*	hallmark_hmm	common_virus	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0004	cloud	direct	high	1178	0.999	GCA_019334725.1_00237
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	230796	231077	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	4124	4405	GCA_019334725_1_1_221	GCA_019334725_1_1_221	-	2284668	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MKFLAALAPYLINHVVKYILTALGVSIITYVGFDALMSNLKNQFISSMGAVPAGAIQIFYIAGGGVVLNIMFGMLAFVVTFKTLSKLSFGKKG*	hallmark_hmm	common_virus	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0005	cloud	direct	high	281	0.996	GCA_019334725.1_00238
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	231086	232597	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	4414	5925	GCA_019334725_1_1_222	GCA_019334725_1_1_222	-	2284668	.	PFAM:PF05616.12	attachment-protein	MLRVLTIIFLLGLSFESFAGDLQVRNGKLAYPLTEKFNENGFRPWKIIGGGIDQEYQSRFDKSLHVREASTGLRSASTVPVTIEAQVSRKAVLSGAFRLVKAGAKLALKAAPYVGAASYAYDAYQAVNPSLESAGYEYNDVSNEYLKVYKDALCTIDKDSCVGVDTSVMRALSKGGVSEKQAQQLLVMQVESEFKKYFDNVIKPNEPGIYFINCFWLDGVACETSKQSRYGYYFQNRALTKILEEDEFLNIATSIIDGNPTPFVEGTGKPEYKENIKVPAGTVVTIGPVTPENGKPVQITITFGQDSNGKTNATVITTPRPDLTPGSPAAPKTNSTPTPGENGKPGSQPDPTPDGSPSDKPKPDPDDSPSGKDNPKPDDKPDPDSKDDPKKDEGPKEDDKPKEDGGLLCKVFPNILACDELPEKEEPDLEIPEEQIDLNFTPDNTFREYGECPAPVTFQALGAEYRISLEPACNLAAMIRPFIIAMAWLVASFFVSRVVRNNA*	common_virus_hmm	common_virus	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0006	cloud	direct	high	1511	0.999	GCA_019334725.1_00239
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	232551	232844	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	5879	6172	GCA_019334725_1_1_223	GCA_019334725_1_1_223	-	2284668	.	.	hypothetical protein	MLEKNEKDFFYITEFELDELSKFYLEKPLSFVFYSYLEETGYLKKFSLDKCQNFFNRINFNKACFEVLFKDNSVFTIGNGEINVTGFDNNFSIRFEL*	.	hypothetical_protein	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0007	cloud	direct	high	293	0.997	GCA_019334725.1_00240
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	232957	233268	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	6285	6596	GCA_019334725_1_1_224	GCA_019334725_1_1_224	-	2284668	.	.	hypothetical protein	MGYRVGLQCFLSNEEAHDYVLSQVLPTVTADGKFVRPYKNGKDWYLNEQKINLSFPQCDIAEQIQFGVLVGAPFIVLLVLVFGIRMIKRLIESVTENKGGGDD*	.	hypothetical_protein	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0008	cloud	direct	high	311	0.997	GCA_019334725.1_00241
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	233284	233526	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	6612	6854	GCA_019334725_1_1_225	GCA_019334725_1_1_225	-	2284668	.	PFAM:PF10389.8	virion-structural-protein	MKLLNVAKKYGNKVIAATALTTASALAAAEGVDLSGIGTTAAAEIAKFAVMVSAIGAAVLSVIVLMQGFRMAFSMVKTAK*	phrogs_hmm	hypothetical_protein	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0009	cloud	direct	high	242	0.996	GCA_019334725.1_00242
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	233763	233966	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	7091	7294	GCA_019334725_1_1_226	GCA_019334725_1_1_226	-	2284668	.	.	hypothetical protein	MSRYQQKFIVQELENYEFICPDQFGDIGFTQNLKEAGQYESYEDAFNAGLEEIGGHFQVFSFYIREE*	.	hypothetical_protein	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0010	cloud	direct	high	203	0.995	GCA_019334725.1_00243
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	233984	234295	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	7312	7623	GCA_019334725_1_1_227	GCA_019334725_1_1_227	-	2284668	.	PFAM:PF07459.10	RstB-protein	MFDQVQVTTYPATLLGAKQFKGEIDGNKIDTCTVLVASPMPANGNSVGFTAASMKFGESHNFDRLKNLKFPCSVNVTVSMESTGKGLVPKLLDFEVKGVAPKA*	common_virus_hmm	common_virus	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_019334725.1_00244
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	234317	235657	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	7645	8985	GCA_019334725_1_1_228	GCA_019334725_1_1_228	-	2284668	.	PFAM:PF02486.18	Replication-initiation-factor	MRAEERAETAGACGGAPCAPQTATPLNAPPRLIGGEQKKPNPQSGEQTEKTDQVEFEYFSQYVTDGKGRLIEIPLRRGREDGAFIDQITFTIHEESIPKVTQKAYVTDAEYLTKYSELLQEILGFGISAKLPYKGKFFYQSCYQLGPKNVEYGKVHYGGQRETILVELNGTGCTAAKPGWENRLYEFLQKCVRPKITRVDVAHDFFNGEYTPEQALTGHDNGLFDCHNVRPKSECKGVSWRHEDGSGKSFYIGKRGNAKYTRIYEKGKQLGDKSSPWVRFETEFRNGDIEVPLDILIHAGAYLGGAYPVCEQIFKCEAKRMDSTVKEVNLTFEHKQFYARQQVGKWVNFLKDIGWSAEEIVKDLTKGIEGYPKGLQPEEYDSSTASAFYIHEEQKAINDLNIEVLDFELNQAVQYEYPQDMQKQHERDFDKEQYQISDQLEDWKYL*	rep_hall_hmm	common_virus	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0012	cloud	direct	high	1340	0.999	GCA_019334725.1_00245
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	235654	235872	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	8982	9200	GCA_019334725_1_1_229	GCA_019334725_1_1_229	-	2284668	.	.	hypothetical protein	MCIAFYTVNSDSFYSFEEQRAVIVRVFKDDELVETVSFPITNPKQKYKTEKQAEEYGRLAVRSILNQWEADA*	.	hypothetical_protein	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0013	cloud	direct	high	218	0.995	GCA_019334725.1_00246
GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote	cenote	CDS	236221	236595	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C12	9549	9923	GCA_019334725_1_1_230	GCA_019334725_1_1_230	-	2284668	.	COG0203	Ribosomal protein L17 [Translation, ribosomal structure and biogenesis]. 	MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKELRRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFDELGPRFAARNGGYVRVLKYGFRKGDNAPLALVELVDKAADSAE*	mmseqs_cdd	nonviral_gene	C12	9923	226673	236596	GCA_019334725.1|CP079818.1@region_226674_236596@tool_cenote_CDS_0014	persistent	direct	high	374	0.997	GCA_019334725.1_00249
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	985261	985563	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	1	303	GCA_019334725_1_1_909	GCA_019334725_1_1_909	+	2284668	.	.	hypothetical protein	MQRKIGIIIMLSAFSVSAMAGGEVRLGKSKAYDNEYELVAEHEVNEEVSQLNQDEYAAHPIRNDSGVMQSGKVASDRQAVSQYGKPNLPPVRLNPHPSRP*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0001	shell	direct	high	302	0.997	GCA_019334725.1_00950
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	985619	986062	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	359	802	GCA_019334725_1_1_910	GCA_019334725_1_1_910	-	2284668	.	3KZT_A	uncharacterized protein	MAADNATNNQAKIDLVKKVYLTKVDLGSEHNRVTTPELQKIIRQFNKFDTNIRKQPDMEMGCDMPIHYYLGFGQDHPDNFHKTLQVKVTSPHTVRATFKQFDGHRVGADFTLKCTENRCLIDDFKMIGDQTGIKTDYKLVLRKQKCE*	hhsuite_tools	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0002	cloud	direct	moderate	334	0.752	GCA_019334725.1_00951
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	986404	986532	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	1144	1272	GCA_019334725_1_1_911	GCA_019334725_1_1_911	+	2284668	.	.	hypothetical protein	MRKQITAAMMILTMIAAPAMANSMENQVFENQVFHTQADAPM*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0003	cloud	direct	high	128	0.992	GCA_019334725.1_00953
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	986616	986855	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	1356	1595	GCA_019334725_1_1_912	GCA_019334725_1_1_912	+	2284668	.	.	hypothetical protein	MGRCRLYAWGVYQGHYKWDNAKFADNVATGAVIDASFGTAGAIASGGVKFIPSLTNAGANIWRVNSTLANNGANRVWRR*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0004	cloud	direct	high	239	0.996	GCA_019334725.1_00954
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	986914	987201	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	1654	1941	GCA_019334725_1_1_913	GCA_019334725_1_1_913	+	2284668	.	.	hypothetical protein	MDDLIAAFLGYLSGKYSEGKISRLKISLTAGSIFFAVFFIHDLIIFIIDGNKENLWNFITKIMKDLFLFSCSVILLCYFLLFIAEKVGEIINKIK*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0005	cloud	direct	high	287	0.997	GCA_019334725.1_00955
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	987836	988114	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	2576	2854	GCA_019334725_1_1_914	GCA_019334725_1_1_914	+	2284668	.	.	hypothetical protein	MMILTMIAPAMANSFDNQTFESQVFHTQADTPMQLAELSQKEMKEAEGAMAPLVALGYLTRIGTFVAARYATPVVRGLIFFMDANWLRLQNN*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0006	cloud	direct	high	278	0.996	GCA_019334725.1_00956
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	988976	989758	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	3716	4498	GCA_019334725_1_1_915	GCA_019334725_1_1_915	+	2284668	.	COG3271	Predicted double-glycine peptidase  [General function prediction only]. 	MVQHGLPLIPVISLTIYTIKNNYVRGRLKAFSDDLLHISLEGMMILKRICLSVPIAVSLSGLLNAAPMFNDNPVVYGKIKVQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQKLTEEEVLKKLDKEQMRASFEDMQRIMPDLGFEAKGYALSFEQLAKLKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSMSRAQFLDAWKTREGNLAGKILAVVPKKAETISNKLFFTHHPKRQTEFAVKQIRLRRVE*	mmseqs_cdd	nonviral_gene	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0007	shell	direct	high	782	0.999	GCA_019334725.1_00957
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	989863	990081	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	4603	4821	GCA_019334725_1_1_916	GCA_019334725_1_1_916	+	2284668	.	.	hypothetical protein	MCIVFYTVNPEPPTFPKSFIVRIFKDDEQRTQCLKTINIPISSPDHLFHAQNAANEYGRLYVSGIMSKENFQ*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0008	shell	direct	high	218	0.995	GCA_019334725.1_00958
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	990078	991403	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	4818	6143	GCA_019334725_1_1_917	GCA_019334725_1_1_917	+	2284668	.	PFAM:PF02486.18	Replication-initiation-factor	MKNELNTKARIAAFGGGSASDTPKADSRAPMAPPLSNRGGAETEAASCTEQETFEKYTTFLTDSKGRLIEVPLRRGKANSAFIDQISFSIHEDTFSLLAGYPLVADDEYIVRASMVLADIFGFGITEKAKHSGGRFYDSCWLMGTDNAQYGRVHFGGQNNTMLIEVTATGCNAASDGWESRLYNFIIQAVRPKITRIDIAKDFFQGEYTPEQAKSDRLAGKFTNHHMMPDGESVGTDWESNNGKGKTYYVGSRESSKYVRVYEKGKQLGDKESQWVRFEIEFKAKDIVIPFEVLTVPGEYFGGAYPVCAQFQEKAERIEAVKKNLELTFERCIEVAKNQVGRAINAAKSMFPQKDRSEILAMFEADHDLLPKRLSLEVYSCTENHAPAIHDKPEGSLWLNESAQVLLEMAIEQKNKMTKLIEAKREQDYLNLMYDRYACRF*	rep_hall_hmm	common_virus	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0009	cloud	direct	high	1325	0.999	GCA_019334725.1_00959
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	991457	991753	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	6197	6493	GCA_019334725_1_1_918	GCA_019334725_1_1_918	+	2284668	.	PFAM:PF07459.10	RstB-protein	MQMQIQGQIMGVKRFNGQIDGKTFDYCRVIVSTPLDSSQGNALGSSATEYDYGGSVNFEQFKSISFPFEAALTVELVTNGKSQKLKILGFQPKSPNKG*	common_virus_hmm	common_virus	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0010	cloud	direct	high	296	0.997	GCA_019334725.1_00960
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	991757	991954	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	6497	6694	GCA_019334725_1_1_919	GCA_019334725_1_1_919	+	2284668	.	.	hypothetical protein	MTITRVYIVQSRETGDFLYPSDTGDVGHTPFVNEAGYFYDRNEAVETALSEIGENFIVFSFLSEF*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0011	cloud	direct	high	197	0.995	GCA_019334725.1_00961
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	992034	992252	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	6774	6992	GCA_019334725_1_1_920	GCA_019334725_1_1_920	+	2284668	.	PFAM:PF10389.8	major-head-protein	MKLMNTCRKYGVKLAVVAAAPLAFATQAYAALPEEAKTGIESAKADGLEAGWLVVGVFAALFVIAIVKRLLR*	phrogs_hmm	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0012	cloud	direct	high	218	0.995	GCA_019334725.1_00962
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	992265	992540	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	7005	7280	GCA_019334725_1_1_921	GCA_019334725_1_1_921	+	2284668	.	.	hypothetical protein	MYYQVGNKCLEQSQAENVYFSLVVPQITQDGKIIKPEYNGTVWKLNGQTIKADLPKCDPSDNLKSGLETGWLLFGVMAAVYFVSILKRVLK*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0013	cloud	direct	high	275	0.996	GCA_019334725.1_00963
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	992668	992988	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	7408	7728	GCA_019334725_1_1_922	GCA_019334725_1_1_922	+	2284668	.	.	hypothetical protein	MFYISEEELRFKKDTNPNYSNEKLCHVFMTELFNLKNLYPFHNFIEIAKNAMQYYLNRSYLNEVIVFFEDHSILKVDFTEDGFGWSEHYDEDITTAFYYGRYTFRL*	.	hypothetical_protein	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0014	cloud	direct	high	320	0.997	GCA_019334725.1_00964
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	992933	994492	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	7673	9232	GCA_019334725_1_1_923	GCA_019334725_1_1_923	+	2284668	.	PFAM:PF05616.12	attachment-protein	MMRILQRLFITVVILLGCNFAFAEAEIVVETNGRMRVVAGEYNSNGVRPWKYISGKGPMFYHEYSPHFDKSLAVRHAASGAVSKSKVPVQVLNTVSRKAVLSGAFGLVKAGAKLGLKAVPYVGAASYAYDAYQAVKSPLESEGYKWNEANEEFLKEWPARNCIWVRDESDRVQDVACYGVDSSVLSAYRKGGKSQREAEELMKGQMEKLAGPFWEKRKKELDKDLNSKFWEYYHLDECRFDLNGGGCSVKRGSDGRSTVSFRLKMRDTEVLDQETFLKISTPSIDANPTPFVEGTGKPEYNEKVSVPVGTVVTIGPVTPENGKPVQITITFGQDSNGNSTAKVETTQRPDLTPGGSEAPNIKPDPDPKPNPDGKPDKKPDDKPDSDDKPDKRPDDKPDPDDDPSDKDKDKRKEDKKEESKGLLCDFFPDILACDKMGKPEEGMFDAISIPQTTDDRTWSSDDFLPPNGVCPQPKSFNIWGKPVQISYEPLCVFMEKVRFAVLLGFIIMSAFIVFGSLRK*	common_virus_hmm	common_virus	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0015	cloud	direct	moderate	1385	0.888	GCA_019334725.1_00965
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	994502	994792	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	9242	9532	GCA_019334725_1_1_924	GCA_019334725_1_1_924	+	2284668	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPLLAGLIPLLAILLKMLIVRIIIATGMTFVTYAGYIIALNKFKDYTVNAINSMPSDILNLLLIGGFGQGLGYLFGAFSFYIGMNTLNKLTFIMPR*	hallmark_hmm	common_virus	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0016	cloud	direct	high	290	0.997	GCA_019334725.1_00966
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	994797	995966	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	9537	10706	GCA_019334725_1_1_925	GCA_019334725_1_1_925	+	2284668	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLFTGNMGTGKTSRVVAMILNNEDGLFKMKLEDGTEVDRPLYFCHIDGLDKRKFNAHELTEEEIMSAPLRDIIPQGAVLIVDEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTQHPSQLDVFVRNLVSKHTHLERKAVGMKQYSWYKCVTSLDNPAAVTGVESSSWKPPKEAFKYYKSSSQHQKFKKQIPLAVWALIGIFAFMAWKGYNVYQIYQQGTGQQEQVEPQEAAASQSQMELPTETEPTAKIDNSLNPTDFIPKLAEKPESKPLYDNVRQVKTFEYIAGCVDGGNSGCTCYSDQGTPLKEITKTMCKDYVRNGLPFNPYKDKTQTIQATQPQNQAKSNDNSQVLALGGKSPQNLMYDGYVEAGEQFQQRGGTVGSN*	hallmark_hmm	common_virus	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0017	cloud	direct	high	1169	0.999	GCA_019334725.1_00967
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	996267	997217	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	11007	11957	GCA_019334725_1_1_926	GCA_019334725_1_1_926	+	2284668	.	PFAM:PF01548.16	Transposase	MNVIGFDISKDTIDVTLLRNSGQVDYIKIANAFEGFEKLNDWIRSKRIRKISISMEATGIYYEEAADYFSAIYQVFVINPLKIKEYSKSQFSHTKTDKADSRLIAEYTKRHLDKLTPFKPSENPTLYKLISLLQQLKQQQNESQNRLHAAKDTFIRATHEAIILLLAKQIDQTAKRIDLMIQQQDSLNTHYKNLQTIPGIGKDTAAILLNHLTDKQFKTANQFVSFAGLSPRIEQSGTSVNKKGRLSRYGHRRLKRALFMPALVAYRIKAFPKLVQNLSQKPKMIVIVALMRKLAKIAYYIHKTQKPFEKMRYQIA*	common_virus_hmm	common_virus	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0018	cloud	direct	high	950	0.999	GCA_019334725.1_00968
GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote	cenote	CDS	997442	998737	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C54	12182	13477	GCA_019334725_1_1_927	GCA_019334725_1_1_927	+	2284668	.	TIGR00442	histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff. [Protein synthesis, tRNA aminoacylation]	MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEAQLDEDSKRRLKTNPLRVLDTKNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLSIQYVENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNAAPDVYAMHQGEGADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDMQGKHEQQTVAAADLTDTLQQWKNA*	mmseqs_cdd	nonviral_gene	C54	13477	985261	998738	GCA_019334725.1|CP079818.1@region_985262_998738@tool_cenote_CDS_0019	persistent	direct	high	1295	0.999	GCA_019334725.1_00969
GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote	cenote	tRNA	166272	166347	GCA_019334725.1	CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725.1_CP079818.1	GCA_019334725.1|CP079818.1	GCA_019334725_1_1	GCA_019334725_1_1@C8	12940	13015	tRNA-Lys	tRNA-Lys	+	2284668	.	tRNAscan-SE score: 84.4	Lys	NA	tRNAscan-SE	.	C8	23703	153333	177036	GCA_019334725.1|CP079818.1@region_153334_177036@tool_cenote_tRNA_0001	.	.	.	.	.	.