core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	76921	77190	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_64	270	-1	0.285	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	64	1	1	270	MNEAIKGVCINLMITFAIGIAITYFNFDYGIDNAFFHFLEKISVVKFFDNHSANTAVTLGLLLTAYEVIDTLFLEDDEEDETEQSINKK	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0001	persistent	direct	high	270	1.0	GCA_019714115.1_00683
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	79819	80340	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_65	522	-1	0.360	11	AGGAG	GENOMAD.168355.VP	3.518e-38	142	0	0	1	1246	Caudoviricetes	NA	NA	PF03592;COG3728;K07474	Phage terminase, small subunit	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	65	2	2899	3420	MDKLTPKQERFANEYMKTLNVTQSAINAGYSSNSAHVTGSRLLRNEKVKDYIQSKKDEIIDDTILTAKETLYLLTKSAVGDETETKEVVVKKSSFERNPDTGRMNLVYNEHVETVEVPIKPSDRLKARDLLGRYHSIFTDKVDMNVATPIFIDSIGQDDEENERDLKELENNI	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0002	shell	direct	high	522	1.0	GCA_019714115.1_00684
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	80345	80686	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_66	342	-1	0.263	11	None	GENOMAD.156435.VV	6.306e-38	138	0	0	0	1246	Caudoviricetes	NA	NA	PF11242;K01994;TIGR03879;COG1342	probable regulatory domain	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	66	3	3425	3766	MFVGDKETLKDFILNYHNNLNDDYKDVSANEFFTLNDDVEEYSYQTINADEHIFMNELYSLVDQIATDKEYFIFDMLLSGRSYKEISQVLKCSIESIRKWFDNLLDEIIENKE	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0003	shell	direct	high	342	1.0	GCA_019714115.1_00685
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	80689	81147	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_67	459	-1	0.322	11	None	GENOMAD.131910.VV	1.002e-67	226	0	0	0	1246	Caudoviricetes	NA	NA	COG5577	Spore coat protein CotF	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	67	4	3769	4227	MQEHTNESYQQSKISEYELLTKYNPKYINSKIKTAQSHIDEMYHLSTSITTCDDIMGVISVSYPVDKLVIWISETKGNLKRFKDDSAIRLYLLKQVLNTYTKEEQQQVVKYMQSHGRIKEHKLIERLQVDLYNISHDKPLTKASEPQHTMVV	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0004	shell	direct	high	459	1.0	GCA_019714115.1_00686
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	81208	81918	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_68	711	-1	0.321	11	GGAG/GAGG	GENOMAD.155869.VV	1.38e-113	363	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	68	5	4288	4998	MTMKTGSAYDVLFNDRKYKDLLDKVDQFLEETFIMYQRGYRMDIIDEQQKPKVTQIENEFKQFASDKLKRIEARMDEIEEELTKDDVADPQSELIRRQNLEARLSFYSNSEIMDYIRGADAEKTDVFELSLLQKAFDQRLSESEQSQVSFSLTALKQAVLYPFENNEEHDNLAYQFNVLRQIGMANNGSVITKDDEGYVVIKPLADRYNDQLKYAKAKKDGARQQAQYKKQYVYNK	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0005	shell	direct	high	711	1.0	GCA_019714115.1_00687
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	81939	82286	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_69	348	-1	0.302	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	69	6	5019	5366	MIKTIEKQVAQPPTEYLRVYDIIQNSNEKYVTKTKILNQLGYTLNKVNDRWLTQVITSLIINYQYPVGYSYKKDARGYYIIRSKEDKQQAIYSVKRQVLGAQTRLKALEEIEIQN	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0006	shell	direct	high	348	1.0	GCA_019714115.1_00688
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	82697	83338	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_70	642	-1	0.369	11	None	GENOMAD.223476.VP	1.864e-124	393	0	0	0	1246	Caudoviricetes	NA	NA	PF16560	Putative mobile pathogenicity island	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	70	7	5777	6418	MNIEIIANQFETRAGTLLRYYTGLLESSKKTPFGFKIYNDPFDMVYVVMEGNLYGHIYIKDCNVRKAFELASPKHTEGLIRSIEGHYAGYDVDDDRHISISDMMASRLFEDEYFLYGLQTFAESNNSDVFEYMEKGFDAGSVEGVQSSNADVIGNIELMYQLATGINEPATELIEGLKLVTEFVQDENATQDDYKALERKLSELKATYYSLNK	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0007	persistent	direct	high	642	1.0	GCA_019714115.1_00689
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	83340	83702	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_71	363	-1	0.300	11	AGGAG	GENOMAD.224407.VP	9.45e-21	89	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	71	8	6420	6782	MNKNHLKSEILEYIKSHDGTTFVEIESVFEENNFNYKGDGAYTSGQHPNIVFWIGWNQEAFNIIAELKRDGLIEMDICPPIIYLVDGKGLDLPIVKSKYIKTDHWLPVAFNICKKEMGCV	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0008	shell	direct	high	363	1.0	GCA_019714115.1_00690
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	84013	85482	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_72	1470	-1	0.329	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	72	9	7093	8562	MEDVTKEEVFELIDENNFLANSDDWRSKLRRSATTQALKKTTSNAELIMENDESLKGLVQYDSFEKITKLKRLPYWRTNDDNNYYWADIDTTHVISHIDRYYNVQFSRDIMDSVIEKEAYHNKFHPIKSMIESKTWDGNKRIETLFIDYLGAEDNHYNREVTKKWMMGAVARIYHPGIKYDSMIILYGGQGDGKSTTVSKLGGHWYNQSLKTFKGDESYKKIQGSWLCEIEELAAFQKSTIEDIKSFISAIVDIYRASYGKRIERHPRQCIFIGTTNNYEFLKDQTGNRRFFPITTDKNKATKSPFDDLTQDIVQQMFAEAKVYFDEDPTDKALLLDKEASETALKVQEEHSEKDVLVGEIEEFLERPIPSDYWYRTLEEKRISAHDVINQDYIKLYGDGKLIELPNAKPGAYVWRDKVCSMEIWKVMMKRDDQPQQHHLRKIDKALRNTRYCGQTKRRSRFGESIGLQYGFDIEMDSYYKELKTKTIE	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0009	shell	direct	high	1470	1.0	GCA_019714115.1_00691
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	85495	86394	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_73	900	-1	0.323	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	73	10	8575	9474	MFVLNGGQKLDFQKVKLNNNFNIHIVQYKNLYSNSCNGSDLYNWSDWLNKLQIPMINENKYKRGLCVYGDFEDIEKDNQNISKYRSDATLINRSAITLDYDEIKDFRGLYEVLKAKLEHVSWAFHTTYSYTAEKPRIRLIVPLNEPVSASDYRKYSNGLARYIGYPVDEASFVPSQAMALPVKKSKDSIYIFKYNDAPAITTEELNKMVVKNAPITVDYSNHFHKHNSSYWREIAFGVGEGERNQTLASLTGYLLRRYVDANLVYGLVSAWAMTCRPPIEQKEVNRTFKSILKKDSKNK	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0010	shell	direct	moderate	873	0.97	GCA_019714115.1_00692
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	86467	86802	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_74	336	-1	0.298	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	74	11	9547	9882	MKDLKFHVSELKNSFVDAELNSKLNTVITLIGEEMARGEEYKSLLDKQNKPMESYIVKEHINHNYVLMAVLNSILKDIDAIEEEIKNEFSSAMEQIEKASSVKSANGTDNA	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0011	shell	direct	high	336	1.0	GCA_019714115.1_00693
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	86804	87220	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_75	417	-1	0.230	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	75	12	9884	10300	MKNKQNLNKNNKFREENEQMNKLTREDYKNIDGKLNYEHIVNNKKQNRKISKLLRKRRNRDISIIKNEYPNLSKSEITKVLDDYRNYKEFVKSSNILIDFPINYEDSNIHKFITKDDVEELKWAIEEMTSFIGKLEEY	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0012	shell	direct	high	417	1.0	GCA_019714115.1_00694
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	87222	87356	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_76	135	-1	0.333	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	76	13	10302	10436	MKNYLTYIGTISFITLASALLLDVFVASAIFILASAYGLNLEVE	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0013	shell	direct	high	135	1.0	GCA_019714115.1_00695
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	87373	87645	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_77	273	-1	0.355	11	AGGAG	GENOMAD.111065.VV	1.534e-49	170	0	0	0	17384	Triavirus	NA	NA	PF18010;COG3311;TIGR02417	Predicted DNA-binding transcriptional regulator AlpA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	77	14	10453	10725	MSRTKLQDIPTKENTITEPKQVVVKPMFAKPNTLACIFGISYSSVNRILKEWEKDSKGIDDLYYSLSSTMTVISIPRFEEYMKKRHKKWM	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0014	shell	direct	high	273	1.0	GCA_019714115.1_00696
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	87645	87860	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_78	216	-1	0.259	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	78	15	10725	10940	MKAKENLLKNEIFLNGYSIKEFSDKVNISRTYMSSVVTRKKGLSPQKAKDVSNALGVEIQDIFEFEVKEVK	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0015	shell	direct	high	216	1.0	GCA_019714115.1_00697
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	88052	88975	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_79	924	1	0.262	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	79	16	11132	12055	MYDLGTFLKNERLNKKKSVKETAEELKVSSSYISMVENNKTFPNSDYLYNLSSYLYGGEETYDILVAEKYIMYCLVGGIKVQPYPFVKFLLTERGMFENNSMVAKPYYSLNWLLNQHNSPITFGFKNDNHFSFDLEEIEPISDFNFFNGEPKAFIQLDSKDKKFIYELIESYLKTKYSSLIENRLNPIKNDVDLIIEKLFEDTDNSNIATPIFTIDELTKTNKQINVLHIRKNWKVVNYTDLDFLITKKSLLGIKPQSNTSKEFVKIGEIEFDETKNNLTNFSIKFPDNYQIDIKKEDKEIIFEYKK	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0016	shell	direct	high	924	1.0	GCA_019714115.1_00698
GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	genomad	CDS	88984	90207	GCA_019714115.1	JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1	GCA_019714115.1_JAIGOC010000002.1	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207_80	1224	1	0.328	11	GGA/GAG/AGG	GENOMAD.111131.VV	1.171e-14	79	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad	GCA_019714115.1|JAIGOC010000002.1	80	17	12064	13287	MWHEKFTNKHGDVQFRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQKRLNERIEAKLNDKTSTTLKSLTFHAACDEWLEYYKNHSGSKATTIKEKLSNTNTVKNAIDKEVLINNITHTYLQDIINEWASIHSKGHVQSLVIIIRSVFKYTFKYYDLQDISVLDKIDIPKKAKTRDELQAKRNNYLEDSEVKELLNCFDYLIKHKKHSTRKRNYKMVKAIVQFQIANGMRIGELLAIKRENINYEDKTLEIDGTINWVTDKETGAFGVKETTKTSKSYRTIGLTTQSINLLKTLILDNKKENQWNEDFIDRGYIFTNTAGSPIDLNKVNSIIKEATEISSIKKRVTTHTLRHTHISTLAQLGINLKAIQERVGHSDYKTTLEIYTHVTDRMAKDMMNKLNKVNFKN	GCA_019714115.1|JAIGOC010000002.1|provirus_76921_90207	GCA_019714115.1|JAIGOC010000002.1@region_76921_90207@tool_genomad_CDS_0017	persistent	direct	high	1224	1.0	GCA_019714115.1_00699