16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.765
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1841
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1954
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.64922.peg.1838
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.64922.peg.1839
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.64922.peg.1396
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.64922.peg.739
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.64922.peg.1405
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.64922.peg.673
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.64922.peg.1438
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.146
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.971
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.64922.peg.2210
5-FCL-like_protein	Hydroxyethylthiazole kinase (EC 2.7.1.50)	fig|6666666.64922.peg.2236
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.64922.peg.164
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.64922.peg.181
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.64922.peg.1423
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.64922.peg.1424
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.64922.peg.1771
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.64922.peg.1318
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.64922.peg.975
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.64922.peg.1040
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.64922.peg.2237
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.64922.peg.1088
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.64922.peg.1668
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.64922.peg.1599
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.64922.peg.1667
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.64922.peg.1669
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.64922.peg.297
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.64922.peg.1666
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.64922.peg.2244
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.64922.peg.1229
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.64922.peg.1262
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.64922.peg.1852
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.64922.peg.1002
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.64922.peg.1129
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.64922.peg.1128
Acetoin,_butanediol_metabolism	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.64922.peg.109
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.64922.peg.1129
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.64922.peg.1128
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.64922.peg.2080
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.64922.peg.465
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.64922.peg.319
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.64922.peg.465
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.64922.peg.221
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.64922.peg.1810
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.64922.peg.1162
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.64922.peg.2174
Alkanesulfonate_assimilation	FMN reductase (EC 1.5.1.29)	fig|6666666.64922.peg.2099
Alkanesulfonates_Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.64922.peg.2099
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.64922.peg.113
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.64922.peg.396
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.64922.peg.402
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.64922.peg.1244
Alpha-acetolactate_operon	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.64922.peg.109
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.64922.peg.1809
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.64922.peg.707
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.64922.peg.1603
Anaerobic_respiratory_reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.64922.peg.1723
Anaerobic_respiratory_reductases	Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)	fig|6666666.64922.peg.1723
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.64922.peg.1050
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.64922.peg.1049
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.64922.peg.1047
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.64922.peg.1045
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.64922.peg.1046
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.64922.peg.1051
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.64922.peg.1052
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.64922.peg.1051
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase related protein	fig|6666666.64922.peg.2266
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.64922.peg.1262
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.64922.peg.1048
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.64922.peg.1050
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.64922.peg.1049
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.64922.peg.1047
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.64922.peg.1045
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.64922.peg.1046
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.64922.peg.1051
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.64922.peg.1052
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.64922.peg.1051
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.64922.peg.1262
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.64922.peg.1048
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.64922.peg.1047
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.64922.peg.1337
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.64922.peg.1048
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.64922.peg.1263
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.64922.peg.1265
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.64922.peg.989
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.64922.peg.688
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.64922.peg.689
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.64922.peg.691
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.64922.peg.690
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.32
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.1575
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.2148
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.64922.peg.543
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.765
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1841
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1954
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.64922.peg.1991
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.64922.peg.1849
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.64922.peg.766
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.64922.peg.1846
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.64922.peg.1489
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.64922.peg.1850
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.64922.peg.1838
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.64922.peg.1490
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.64922.peg.1609
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.714
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.2272
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.64922.peg.1693
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.64922.peg.123
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.64922.peg.1914
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.64922.peg.1839
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.64922.peg.1669
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.64922.peg.113
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.32
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.1575
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.2148
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.765
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1841
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1954
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.64922.peg.1991
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.64922.peg.1849
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.64922.peg.766
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.64922.peg.1846
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.64922.peg.1850
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.64922.peg.1838
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.714
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.2272
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.64922.peg.713
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.64922.peg.123
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.64922.peg.714
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.64922.peg.2272
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.64922.peg.713
Bacterial_hemoglobins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.64922.peg.482
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.64922.peg.1593
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.64922.peg.1914
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.64922.peg.1923
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.64922.peg.2111
Beta-lactamase	Beta-lactamase	fig|6666666.64922.peg.1154
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.64922.peg.1766
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.64922.peg.1558
Bilin_Biosynthesis	Heme oxygenase (EC 1.14.99.3)	fig|6666666.64922.peg.893
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.64922.peg.2038
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.64922.peg.1021
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.64922.peg.1020
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.64922.peg.1022
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.64922.peg.1019
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.64922.peg.2071
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.64922.peg.1775
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.64922.peg.2163
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.64922.peg.1736
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.64922.peg.2000
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.64922.peg.1570
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.64922.peg.789
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.64922.peg.111
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.64922.peg.1571
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.405
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.959
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.991
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.992
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.994
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.1679
Biotin_biosynthesis	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.64922.peg.1735
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.64922.peg.1884
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.64922.peg.2001
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.64922.peg.1998
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.64922.peg.1736
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.64922.peg.1570
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.64922.peg.789
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.64922.peg.48
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.64922.peg.1571
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.64922.peg.1736
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.64922.peg.2000
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.64922.peg.1570
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.64922.peg.789
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.64922.peg.111
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.64922.peg.48
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.64922.peg.1571
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.405
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.959
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.991
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.992
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.994
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.1679
Biotin_synthesis_cluster	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.64922.peg.1735
Biotin_synthesis_cluster	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.64922.peg.2001
Biotin_synthesis_cluster	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.64922.peg.1998
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.64922.peg.915
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.64922.peg.1095
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.64922.peg.1094
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.64922.peg.1123
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.64922.peg.1129
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.64922.peg.1128
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.64922.peg.1810
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.64922.peg.1131
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.64922.peg.1127
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase biosynthetic (EC 4.3.1.19)	fig|6666666.64922.peg.1877
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.64922.peg.2253
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.64922.peg.2101
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.64922.peg.1714
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.64922.peg.673
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.64922.peg.1564
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.64922.peg.1565
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.64922.peg.1779
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.64922.peg.1777
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.64922.peg.1778
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.64922.peg.1975
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.64922.peg.1974
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.64922.peg.1973
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.64922.peg.1979
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.64922.peg.1630
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.64922.peg.1631
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.64922.peg.569
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.64922.peg.1776
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.64922.peg.154
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.64922.peg.1297
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.64922.peg.1694
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.64922.peg.2136
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.64922.peg.2090
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.64922.peg.1693
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.64922.peg.1909
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.64922.peg.1934
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.64922.peg.1935
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.64922.peg.2168
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.64922.peg.2167
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.64922.peg.2163
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.64922.peg.2173
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.64922.peg.2171
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.64922.peg.2172
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.64922.peg.2170
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.64922.peg.1021
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.64922.peg.1020
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.64922.peg.1022
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.64922.peg.1017
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.64922.peg.1645
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.64922.peg.1019
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.64922.peg.2274
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.64922.peg.446
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.64922.peg.918
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.64922.peg.48
CBSS-216591.1.peg.168	Histone acetyltransferase HPA2 and related acetyltransferases	fig|6666666.64922.peg.736
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.64922.peg.1878
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.64922.peg.1931
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.64922.peg.1617
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.64922.peg.503
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.64922.peg.2095
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.64922.peg.934
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.64922.peg.1082
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.64922.peg.1206
CBSS-269482.1.peg.1294	Organic hydroperoxide resistance protein	fig|6666666.64922.peg.1752
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.588
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.953
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.64922.peg.1940
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.64922.peg.95
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.64922.peg.95
CBSS-279010.5.peg.587	Lactam utilization protein LamB	fig|6666666.64922.peg.94
CBSS-279010.5.peg.587	hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	fig|6666666.64922.peg.99
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.64922.peg.2267
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.64922.peg.2036
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.64922.peg.965
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.64922.peg.247
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.64922.peg.1955
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.64922.peg.1943
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.64922.peg.1944
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.64922.peg.1922
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.64922.peg.2269
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.64922.peg.2271
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.64922.peg.2270
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.64922.peg.1803
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.64922.peg.647
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.64922.peg.710
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.64922.peg.1785
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.64922.peg.1574
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.64922.peg.1815
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.64922.peg.1817
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.64922.peg.1775
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.64922.peg.2163
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.64922.peg.465
CBSS-320388.3.peg.3759	Phytoene synthase (EC 2.5.1.32)	fig|6666666.64922.peg.562
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.64922.peg.465
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.64922.peg.1400
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.64922.peg.379
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.64922.peg.2157
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.64922.peg.2156
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.64922.peg.2274
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.64922.peg.2042
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.64922.peg.1710
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.64922.peg.1777
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.64922.peg.2050
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.64922.peg.753
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.64922.peg.1870
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.64922.peg.1429
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.64922.peg.1151
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.64922.peg.993
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.64922.peg.1162
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.64922.peg.242
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.64922.peg.52
CBSS-410289.13.peg.3174	Epoxide hydrolase (EC 3.3.2.9)	fig|6666666.64922.peg.940
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.64922.peg.2277
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.64922.peg.2276
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.64922.peg.2275
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.64922.peg.2278
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.64922.peg.2280
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.64922.peg.931
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.64922.peg.932
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.64922.peg.933
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.64922.peg.934
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.64922.peg.2127
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.64922.peg.1162
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.64922.peg.540
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.64922.peg.2011
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.64922.peg.1804
CBSS-89187.3.peg.2957	Glutathione S-transferase domain protein	fig|6666666.64922.peg.1136
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.64922.peg.2141
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.64922.peg.514
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.64922.peg.2140
CRISPRs	CRISPR-associated helicase Cas3, protein	fig|6666666.64922.peg.1753
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.64922.peg.1759
CRISPRs	CRISPR-associated protein, Cse1 family	fig|6666666.64922.peg.1754
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.64922.peg.1307
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.64922.peg.491
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.64922.peg.2154
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.64922.peg.1365
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.64922.peg.2155
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.64922.peg.1606
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.64922.peg.2143
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.64922.peg.2162
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.64922.peg.2156
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.64922.peg.1453
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.64922.peg.1496
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.64922.peg.2240
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.64922.peg.964
Carbon_Starvation	Carbon starvation protein A	fig|6666666.64922.peg.557
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.64922.peg.511
Catechol_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.64922.peg.1716
Catechol_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.64922.peg.1717
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.32
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.1575
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.2148
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.64922.peg.543
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.64922.peg.542
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.64922.peg.1358
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.64922.peg.1367
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.64922.peg.1880
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.64922.peg.1071
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.64922.peg.1931
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.64922.peg.1340
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.64922.peg.1851
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.64922.peg.1849
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.64922.peg.1850
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.64922.peg.1853
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.64922.peg.1854
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.64922.peg.1855
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.64922.peg.1852
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.64922.peg.1848
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.64922.peg.70
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.64922.peg.371
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.64922.peg.433
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.64922.peg.749
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.64922.peg.748
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.64922.peg.750
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.64922.peg.750
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.64922.peg.750
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.64922.peg.826
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.64922.peg.828
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.229
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.827
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1283
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1395
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1664
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.64922.peg.74
Choline_uptake_and_conversion_to_betaine_clusters	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.64922.peg.826
Choline_uptake_and_conversion_to_betaine_clusters	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.64922.peg.828
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.229
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.827
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1283
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1395
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1664
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.64922.peg.389
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.64922.peg.619
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.64922.peg.688
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.64922.peg.687
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.64922.peg.686
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.64922.peg.689
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.64922.peg.1899
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.64922.peg.1120
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.64922.peg.390
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.64922.peg.390
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.64922.peg.689
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.64922.peg.1894
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.64922.peg.691
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.64922.peg.690
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.64922.peg.1830
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.64922.peg.2113
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.64922.peg.2112
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.64922.peg.41
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.64922.peg.883
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.64922.peg.1430
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.64922.peg.2110
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.64922.peg.374
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.64922.peg.2108
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.64922.peg.2111
Citrate_Metabolism,_Transport,_and_Regulation	Anaerobic C4-dicarboxylate transporter DcuC	fig|6666666.64922.peg.1408
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.64922.peg.2214
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.64922.peg.2218
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.64922.peg.2222
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.64922.peg.2219
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.64922.peg.2216
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.64922.peg.2215
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.64922.peg.2217
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.64922.peg.2220
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.64922.peg.2221
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.64922.peg.2105
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.64922.peg.2107
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.64922.peg.2108
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.64922.peg.1811
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.64922.peg.1296
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.64922.peg.753
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.64922.peg.1069
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.64922.peg.1127
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.64922.peg.551
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.64922.peg.1319
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.64922.peg.1082
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.64922.peg.2137
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.64922.peg.2137
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.64922.peg.446
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.64922.peg.951
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.64922.peg.1472
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.64922.peg.1830
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.64922.peg.2113
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.64922.peg.2112
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.64922.peg.41
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.64922.peg.2110
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.64922.peg.2108
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.64922.peg.2111
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.64922.peg.577
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.64922.peg.638
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.64922.peg.936
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.64922.peg.649
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.64922.peg.732
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.64922.peg.773
Copper_homeostasis	Copper chaperone	fig|6666666.64922.peg.648
Copper_homeostasis	Copper resistance protein D	fig|6666666.64922.peg.1587
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.64922.peg.649
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.64922.peg.732
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.64922.peg.773
Copper_homeostasis	Multicopper oxidase	fig|6666666.64922.peg.780
Copper_homeostasis	Multicopper oxidase	fig|6666666.64922.peg.1199
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.64922.peg.570
Cyanate_hydrolysis	Cyanate hydratase (EC 4.2.1.104)	fig|6666666.64922.peg.1729
Cysteine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.64922.peg.1595
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.64922.peg.639
Cysteine_Biosynthesis	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.64922.peg.460
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.64922.peg.638
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.64922.peg.462
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.64922.peg.461
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.64922.peg.796
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.64922.peg.58
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.64922.peg.1144
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.64922.peg.2242
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.64922.peg.84
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.64922.peg.83
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.64922.peg.105
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.64922.peg.1606
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.64922.peg.2042
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.64922.peg.1151
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.64922.peg.1076
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.64922.peg.1400
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	fig|6666666.64922.peg.734
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.64922.peg.936
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.64922.peg.666
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.64922.peg.1434
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.64922.peg.1910
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.64922.peg.1087
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.64922.peg.728
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.64922.peg.723
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.64922.peg.906
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.64922.peg.907
DNA_processing_cluster	Recombination protein RecR	fig|6666666.64922.peg.908
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.64922.peg.1061
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.64922.peg.206
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.64922.peg.331
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.64922.peg.1067
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.64922.peg.2149
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.64922.peg.569
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.64922.peg.823
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.64922.peg.1866
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.64922.peg.1300
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.64922.peg.572
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.64922.peg.2277
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.64922.peg.162
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.64922.peg.512
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.64922.peg.1303
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.64922.peg.1304
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.64922.peg.993
DNA_repair,_bacterial	RecA protein	fig|6666666.64922.peg.2003
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.64922.peg.2025
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.64922.peg.654
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.64922.peg.1551
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.64922.peg.27
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.64922.peg.26
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.64922.peg.721
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.64922.peg.1694
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.64922.peg.2003
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.64922.peg.908
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.64922.peg.654
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.64922.peg.2003
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.64922.peg.2025
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.64922.peg.1429
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.64922.peg.23
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.64922.peg.313
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.64922.peg.1995
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.64922.peg.2003
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.64922.peg.2004
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.64922.peg.1936
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.64922.peg.719
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.64922.peg.728
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.64922.peg.723
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.64922.peg.720
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.64922.peg.721
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.64922.peg.832
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.64922.peg.729
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.64922.peg.1880
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.64922.peg.722
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.64922.peg.1913
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.588
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.953
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.64922.peg.728
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.64922.peg.723
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.64922.peg.596
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.64922.peg.1407
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.64922.peg.615
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.64922.peg.1423
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.64922.peg.595
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.64922.peg.108
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.64922.peg.107
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.64922.peg.597
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.64922.peg.1423
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.64922.peg.616
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.64922.peg.603
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.64922.peg.604
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.64922.peg.605
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.64922.peg.607
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.64922.peg.1424
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.64922.peg.500
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.64922.peg.1354
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.64922.peg.2129
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.64922.peg.2132
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.64922.peg.2131
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.64922.peg.2130
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.64922.peg.2199
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.64922.peg.488
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.64922.peg.2133
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.64922.peg.2128
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.64922.peg.149
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.64922.peg.2128
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.64922.peg.2196
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.64922.peg.952
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.64922.peg.1246
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.64922.peg.1809
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.64922.peg.1806
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.64922.peg.1246
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.64922.peg.1771
Denitrification	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.64922.peg.174
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.64922.peg.1194
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.64922.peg.1195
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.64922.peg.1196
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.64922.peg.1197
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribonucleoside regulator DeoR (transcriptional repressor)	fig|6666666.64922.peg.318
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.64922.peg.321
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.64922.peg.984
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.64922.peg.319
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.64922.peg.105
Deoxyribose_and_Deoxynucleoside_Catabolism	Thymidine phosphorylase (EC 2.4.2.4)	fig|6666666.64922.peg.133
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.64922.peg.2052
Di-Inositol-Phosphate_biosynthesis	Inositol-1-phosphate synthase (EC 5.5.1.4)	fig|6666666.64922.peg.660
Dihydroxyacetone_kinases	DHA-specific IIA component	fig|6666666.64922.peg.2049
Dihydroxyacetone_kinases	DHA-specific phosphocarrier protein HPr	fig|6666666.64922.peg.2049
Dihydroxyacetone_kinases	Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29)	fig|6666666.64922.peg.741
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	fig|6666666.64922.peg.2048
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	fig|6666666.64922.peg.2047
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM	fig|6666666.64922.peg.2049
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.64922.peg.57
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.64922.peg.1009
EC699-706	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.64922.peg.95
EC699-706	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.64922.peg.95
EC699-706	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.64922.peg.313
EC699-706	Lactam utilization protein LamB	fig|6666666.64922.peg.94
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.64922.peg.2000
ECF_class_transporters	ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter	fig|6666666.64922.peg.2186
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.64922.peg.304
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.64922.peg.2001
ECF_class_transporters	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.64922.peg.2184
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.64922.peg.305
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.64922.peg.1998
ECF_class_transporters	Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter	fig|6666666.64922.peg.2185
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.64922.peg.303
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.64922.peg.2158
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.64922.peg.1334
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.64922.peg.84
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.64922.peg.2160
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.64922.peg.2154
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.64922.peg.2159
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.64922.peg.2155
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.64922.peg.996
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.64922.peg.2051
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.64922.peg.1901
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.64922.peg.503
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.64922.peg.502
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.64922.peg.1714
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.64922.peg.1617
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.64922.peg.121
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.64922.peg.407
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.64922.peg.121
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.64922.peg.407
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.64922.peg.96
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.64922.peg.128
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.64922.peg.1720
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.64922.peg.96
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.64922.peg.128
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.64922.peg.1721
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.64922.peg.1102
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.64922.peg.406
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.64922.peg.503
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.64922.peg.367
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.64922.peg.502
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.64922.peg.503
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.64922.peg.673
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.64922.peg.367
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.64922.peg.502
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.64922.peg.1564
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.64922.peg.1565
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.64922.peg.1566
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.64922.peg.2050
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.765
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1841
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1954
Flavohaemoglobin	ABC-type Fe3+-siderophore transport system, permease 2 component	fig|6666666.64922.peg.1508
Flavohaemoglobin	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.64922.peg.482
Flavohaemoglobin	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.64922.peg.174
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.64922.peg.547
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.64922.peg.1405
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.64922.peg.389
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.64922.peg.619
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.64922.peg.1438
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.64922.peg.1622
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.64922.peg.546
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.64922.peg.545
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.64922.peg.1622
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.64922.peg.544
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.64922.peg.390
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.64922.peg.390
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.64922.peg.1437
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.64922.peg.1987
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.64922.peg.547
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.64922.peg.543
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.64922.peg.546
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.64922.peg.545
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.64922.peg.548
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.64922.peg.544
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.64922.peg.542
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.64922.peg.551
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.64922.peg.184
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.64922.peg.1291
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.64922.peg.1292
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.64922.peg.1293
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.64922.peg.1290
Formate_hydrogenase	Formate dehydrogenase O putative subunit	fig|6666666.64922.peg.1289
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.64922.peg.260
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Sucrose-6-phosphate hydrolase (EC 3.2.1.26)	fig|6666666.64922.peg.270
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.64922.peg.2022
Fructose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.64922.peg.272
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.64922.peg.2021
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.64922.peg.2021
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.64922.peg.2021
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.64922.peg.2023
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.64922.peg.2161
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.64922.peg.2024
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.64922.peg.871
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.64922.peg.1359
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.64922.peg.1814
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.64922.peg.1295
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.64922.peg.1905
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.64922.peg.1814
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.64922.peg.446
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.64922.peg.2207
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.64922.peg.1557
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.64922.peg.1576
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.64922.peg.1784
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.64922.peg.1797
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.64922.peg.612
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.64922.peg.1867
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.64922.peg.1905
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.64922.peg.1784
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.64922.peg.1797
Glutaredoxins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.64922.peg.482
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.64922.peg.1543
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.64922.peg.2096
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.64922.peg.1543
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.64922.peg.623
Glutathione_analogs:_mycothiol	Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	fig|6666666.64922.peg.961
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.64922.peg.995
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.64922.peg.2202
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.64922.peg.1322
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.64922.peg.1275
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.64922.peg.1956
Glutathione_analogs:_mycothiol	Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR	fig|6666666.64922.peg.962
Glutathione_analogs:_mycothiol	S-nitrosomycothiol reductase MscR	fig|6666666.64922.peg.961
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.64922.peg.1901
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.64922.peg.383
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol uptake facilitator protein	fig|6666666.64922.peg.382
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.64922.peg.80
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3)	fig|6666666.64922.peg.78
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)	fig|6666666.64922.peg.79
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.64922.peg.381
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.64922.peg.1091
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.64922.peg.368
Glycerol_fermentation_to_1,3-propanediol	Glycerol uptake facilitator protein	fig|6666666.64922.peg.382
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.64922.peg.380
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.64922.peg.1827
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.64922.peg.673
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.452
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.478
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.1727
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.64922.peg.1994
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.64922.peg.2075
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.64922.peg.511
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Dihydroxyacetone kinase family protein	fig|6666666.64922.peg.1086
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.64922.peg.383
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.64922.peg.381
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.64922.peg.1091
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.64922.peg.1947
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.64922.peg.1318
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.64922.peg.1804
Glycine_and_Serine_Utilization	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.64922.peg.1595
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.64922.peg.1124
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.64922.peg.1635
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.64922.peg.1803
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.64922.peg.1805
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.64922.peg.2040
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.64922.peg.2098
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.64922.peg.1464
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.64922.peg.1005
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.64922.peg.1549
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.64922.peg.1318
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.64922.peg.836
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.64922.peg.2041
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.64922.peg.379
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.64922.peg.1804
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.146
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.971
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.64922.peg.1803
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.64922.peg.1805
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.64922.peg.647
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.64922.peg.710
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.64922.peg.709
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.64922.peg.1121
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.64922.peg.1347
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.64922.peg.1144
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.64922.peg.1334
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.64922.peg.1307
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.64922.peg.491
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.64922.peg.1432
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.64922.peg.2154
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.64922.peg.1365
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.64922.peg.2155
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.64922.peg.996
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.64922.peg.2051
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.64922.peg.1901
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.64922.peg.2156
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.64922.peg.1144
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.64922.peg.1334
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.64922.peg.1307
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.64922.peg.1432
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.64922.peg.2155
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.64922.peg.996
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.64922.peg.1901
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.64922.peg.2156
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.64922.peg.1694
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.64922.peg.1693
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.64922.peg.1698
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.64922.peg.1689
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.64922.peg.1696
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.64922.peg.2188
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.64922.peg.1463
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.64922.peg.1620
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.64922.peg.476
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.64922.peg.1687
GroEL_GroES	Chaperone protein DnaK	fig|6666666.64922.peg.474
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.64922.peg.207
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.64922.peg.526
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.64922.peg.208
GroEL_GroES	Heat shock protein GrpE	fig|6666666.64922.peg.475
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.64922.peg.1686
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.64922.peg.476
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.64922.peg.1687
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.64922.peg.474
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.64922.peg.475
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.64922.peg.1686
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.64922.peg.477
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.64922.peg.1560
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.64922.peg.1559
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.64922.peg.1688
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.64922.peg.1880
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.64922.peg.1657
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.64922.peg.1396
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.64922.peg.1488
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.64922.peg.1164
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.64922.peg.274
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, ATPase component HmuV	fig|6666666.64922.peg.891
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT	fig|6666666.64922.peg.889
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, permease protein HmuU	fig|6666666.64922.peg.890
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme oxygenase (EC 1.14.99.3)	fig|6666666.64922.peg.893
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.64922.peg.358
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.64922.peg.671
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system, sensory histidine kinase HrrS	fig|6666666.64922.peg.357
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron-dependent repressor IdeR/DtxR	fig|6666666.64922.peg.2037
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.64922.peg.2192
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.64922.peg.1017
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.64922.peg.1007
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.64922.peg.1111
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.64922.peg.2062
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.64922.peg.1008
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.64922.peg.1010
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.64922.peg.1014
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.64922.peg.1013
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.64922.peg.57
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.64922.peg.1009
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.64922.peg.1009
Hfl_operon	GTP-binding protein HflX	fig|6666666.64922.peg.2014
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.64922.peg.624
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.64922.peg.997
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.64922.peg.998
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.64922.peg.627
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.64922.peg.626
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.64922.peg.625
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.64922.peg.628
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.64922.peg.2206
Histidine_Biosynthesis	Histidinol dehydrogenase (EC 1.1.1.23)	fig|6666666.64922.peg.1888
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.64922.peg.1494
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.64922.peg.1895
Histidine_Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.64922.peg.1889
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	fig|6666666.64922.peg.1893
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	fig|6666666.64922.peg.1896
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.64922.peg.1890
Histidine_Biosynthesis	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.64922.peg.1897
Histidine_Biosynthesis	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.64922.peg.2205
Histidine_Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.64922.peg.1894
Histidine_Degradation	Formiminoglutamase (EC 3.5.3.8)	fig|6666666.64922.peg.1236
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.64922.peg.1234
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.64922.peg.1230
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.64922.peg.1231
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.64922.peg.1096
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.64922.peg.1235
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.64922.peg.2055
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.64922.peg.1560
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.64922.peg.721
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.64922.peg.832
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.64922.peg.1291
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.64922.peg.1293
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.64922.peg.1273
Inorganic_Sulfur_Assimilation	Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	fig|6666666.64922.peg.460
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.64922.peg.62
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.64922.peg.63
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.64922.peg.501
Inorganic_Sulfur_Assimilation	Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	fig|6666666.64922.peg.61
Inorganic_Sulfur_Assimilation	Ferredoxin-like protein involved in electron transfer	fig|6666666.64922.peg.60
Inorganic_Sulfur_Assimilation	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.64922.peg.460
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.64922.peg.462
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.64922.peg.461
Inorganic_Sulfur_Assimilation	Sulfate transporter, CysZ-type	fig|6666666.64922.peg.58
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.64922.peg.187
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.64922.peg.1875
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.588
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.953
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.64922.peg.222
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.64922.peg.1689
Inteins	Translation initiation factor 2	fig|6666666.64922.peg.1973
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.64922.peg.1162
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.64922.peg.2174
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.64922.peg.620
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.64922.peg.618
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.64922.peg.2173
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.64922.peg.2171
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.64922.peg.2172
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.64922.peg.2170
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.64922.peg.2176
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.64922.peg.2175
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.64922.peg.1813
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.64922.peg.1810
Isoleucine_degradation	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.64922.peg.1806
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.64922.peg.1951
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.64922.peg.2059
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.64922.peg.1953
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.64922.peg.576
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.64922.peg.575
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.64922.peg.1388
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.64922.peg.1302
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.64922.peg.1714
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.64922.peg.324
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.64922.peg.1675
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.64922.peg.1675
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.64922.peg.1927
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.64922.peg.1925
L-ascorbate_utilization_(and_related_gene_clusters)	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.64922.peg.1860
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.64922.peg.1211
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.64922.peg.1776
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.64922.peg.386
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.64922.peg.311
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.64922.peg.315
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.64922.peg.314
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.64922.peg.310
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.64922.peg.317
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.64922.peg.316
Lactate_utilization	L-lactate permease	fig|6666666.64922.peg.2153
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.64922.peg.223
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.64922.peg.1210
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.64922.peg.1211
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.64922.peg.1212
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.64922.peg.2036
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.64922.peg.1780
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.64922.peg.2036
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.64922.peg.915
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.64922.peg.1095
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.64922.peg.1094
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.64922.peg.1123
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.64922.peg.1810
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.64922.peg.2227
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.64922.peg.2226
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.64922.peg.2228
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.64922.peg.2229
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.64922.peg.1800
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.64922.peg.1802
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.64922.peg.1800
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.64922.peg.1802
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.64922.peg.1870
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.64922.peg.1900
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.64922.peg.2030
LysR-family_proteins_in_Escherichia_coli	LysR family transcriptional regulator YeiE	fig|6666666.64922.peg.1526
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.64922.peg.2030
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.64922.peg.1264
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.64922.peg.919
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.64922.peg.918
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.64922.peg.1208
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.64922.peg.2011
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.64922.peg.1662
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.64922.peg.1902
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.64922.peg.1272
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.64922.peg.1262
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.64922.peg.1714
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.64922.peg.1163
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.64922.peg.1164
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.64922.peg.2240
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.64922.peg.869
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.64922.peg.114
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.64922.peg.115
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.64922.peg.113
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.64922.peg.112
Mannitol_Utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.64922.peg.272
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.64922.peg.2023
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.64922.peg.68
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.64922.peg.55
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.64922.peg.93
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.64922.peg.93
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.64922.peg.93
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.64922.peg.64
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.64922.peg.322
Mannose_Metabolism	Putative regulator of the mannose operon, ManO	fig|6666666.64922.peg.56
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.64922.peg.326
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.64922.peg.326
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.64922.peg.326
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.64922.peg.329
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.64922.peg.1029
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.64922.peg.1031
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.64922.peg.1027
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.64922.peg.326
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.64922.peg.540
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.64922.peg.2038
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.64922.peg.1842
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.64922.peg.1843
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.64922.peg.1182
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.64922.peg.739
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.64922.peg.740
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.64922.peg.1672
Methionine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.64922.peg.1595
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.64922.peg.639
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.64922.peg.178
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.64922.peg.1207
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.64922.peg.1206
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.64922.peg.189
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.64922.peg.190
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.64922.peg.188
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.64922.peg.177
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.64922.peg.177
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.64922.peg.465
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.64922.peg.2138
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.64922.peg.989
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.64922.peg.638
Methionine_Degradation	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.64922.peg.1595
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.64922.peg.189
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.64922.peg.190
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.64922.peg.188
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.64922.peg.1771
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.64922.peg.465
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.64922.peg.2138
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.64922.peg.989
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.64922.peg.465
Methylcitrate_cycle	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.64922.peg.144
Methylcitrate_cycle	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.64922.peg.142
Methylcitrate_cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.64922.peg.2188
Methylcitrate_cycle	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.64922.peg.143
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.452
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.478
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.1727
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.452
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.478
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.1727
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.64922.peg.2096
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.64922.peg.2005
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.64922.peg.544
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.64922.peg.2146
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.64922.peg.1203
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.64922.peg.1188
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.64922.peg.860
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.64922.peg.1192
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.64922.peg.1190
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.64922.peg.862
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.64922.peg.859
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.64922.peg.1204
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.64922.peg.861
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.64922.peg.1189
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.64922.peg.1403
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.64922.peg.1031
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.64922.peg.524
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.64922.peg.1915
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.64922.peg.524
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.64922.peg.1915
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.64922.peg.523
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.64922.peg.1916
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.64922.peg.522
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.64922.peg.1917
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.64922.peg.521
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.64922.peg.1918
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.64922.peg.520
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.64922.peg.1919
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.64922.peg.519
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.64922.peg.540
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.64922.peg.711
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.64922.peg.1984
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.64922.peg.307
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.64922.peg.306
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.64922.peg.1057
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.64922.peg.1058
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.64922.peg.1059
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.64922.peg.301
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.64922.peg.300
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.64922.peg.299
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.64922.peg.298
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.64922.peg.1144
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.64922.peg.433
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.64922.peg.2036
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.64922.peg.2274
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.64922.peg.2278
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.64922.peg.1540
NAD_and_NADP_cofactor_biosynthesis_global	Niacin transporter NiaP	fig|6666666.64922.peg.650
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.64922.peg.1808
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.64922.peg.1552
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.64922.peg.1643
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.64922.peg.1339
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.64922.peg.1338
Niacin-Choline_transport_and_metabolism	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.64922.peg.826
Niacin-Choline_transport_and_metabolism	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.64922.peg.828
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.229
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.827
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1283
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1395
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.64922.peg.1664
Niacin-Choline_transport_and_metabolism	Niacin transporter NiaP	fig|6666666.64922.peg.650
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.64922.peg.1808
Nitrate_and_nitrite_ammonification	Nitrate ABC transporter, ATP-binding protein	fig|6666666.64922.peg.1035
Nitrate_and_nitrite_ammonification	Nitrate ABC transporter, permease protein	fig|6666666.64922.peg.1034
Nitrate_and_nitrite_ammonification	Nitrate/nitrite transporter	fig|6666666.64922.peg.1193
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.64922.peg.1194
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.64922.peg.1195
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.64922.peg.1196
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.64922.peg.1197
Nitrosative_stress	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.64922.peg.174
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.64922.peg.1951
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.64922.peg.2059
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.64922.peg.1953
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.64922.peg.576
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.64922.peg.575
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.64922.peg.1388
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.64922.peg.1302
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.64922.peg.1336
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.64922.peg.2274
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.64922.peg.2055
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.64922.peg.938
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.64922.peg.1238
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.64922.peg.24
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Nudix hydrolase family protein PA3470	fig|6666666.64922.peg.866
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.64922.peg.1974
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.64922.peg.1972
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.64922.peg.1973
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.64922.peg.1294
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.64922.peg.739
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.64922.peg.1405
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.64922.peg.2210
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.64922.peg.181
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.64922.peg.181
Osmoregulation	Glycerol uptake facilitator protein	fig|6666666.64922.peg.382
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.64922.peg.922
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.64922.peg.2030
Oxidative_stress	Organic hydroperoxide resistance protein	fig|6666666.64922.peg.1752
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.64922.peg.364
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.64922.peg.1696
Oxygen_and_light_sensor_PpaA-PpsR	Heme oxygenase (EC 1.14.99.3)	fig|6666666.64922.peg.893
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.64922.peg.2242
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.64922.peg.2158
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.64922.peg.2160
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.64922.peg.1606
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.64922.peg.1354
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.64922.peg.2143
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.64922.peg.2161
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.64922.peg.2162
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.64922.peg.365
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.64922.peg.2063
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.765
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1841
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.64922.peg.1954
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.64922.peg.1090
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.64922.peg.540
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.64922.peg.1353
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.64922.peg.1557
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.64922.peg.1784
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.64922.peg.1797
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.64922.peg.657
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.64922.peg.658
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.64922.peg.929
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.64922.peg.1353
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.64922.peg.1844
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.64922.peg.988
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.64922.peg.641
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.64922.peg.1847
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.64922.peg.1848
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.64922.peg.1845
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.64922.peg.1842
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.64922.peg.1843
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.64922.peg.1090
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.64922.peg.1848
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.64922.peg.1845
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.64922.peg.1842
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.64922.peg.1843
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.64922.peg.704
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.64922.peg.744
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.64922.peg.743
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.64922.peg.1020
Persister_Cells	Cell division inhibitor	fig|6666666.64922.peg.2127
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, ATP-binding protein	fig|6666666.64922.peg.1480
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, periplasmic binding protein	fig|6666666.64922.peg.1483
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein I	fig|6666666.64922.peg.1482
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein II	fig|6666666.64922.peg.1481
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.64922.peg.187
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.64922.peg.1875
Phage_replication	DNA primase/helicase, phage-associated	fig|6666666.64922.peg.978
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.64922.peg.726
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.64922.peg.727
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.64922.peg.883
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.64922.peg.864
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.64922.peg.1430
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.64922.peg.374
Phenylpropanoid_compound_degradation	Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)	fig|6666666.64922.peg.1723
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.64922.peg.624
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.64922.peg.997
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.64922.peg.998
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.64922.peg.681
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.64922.peg.1876
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.64922.peg.1000
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.64922.peg.1331
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.64922.peg.539
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.64922.peg.624
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.64922.peg.997
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.64922.peg.998
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.64922.peg.1689
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.64922.peg.1689
Phosphate_metabolism	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.64922.peg.627
Phosphate_metabolism	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.64922.peg.626
Phosphate_metabolism	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.64922.peg.625
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.64922.peg.628
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.64922.peg.1314
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.64922.peg.1614
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.64922.peg.996
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.64922.peg.1804
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.64922.peg.922
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.146
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.971
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.64922.peg.1803
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.64922.peg.1805
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.64922.peg.1318
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.714
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.2272
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.64922.peg.713
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.64922.peg.1557
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.64922.peg.1983
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.64922.peg.701
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.64922.peg.1714
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.64922.peg.1000
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.64922.peg.1331
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.64922.peg.2051
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.64922.peg.529
Polysaccharide_deacetylases	Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)	fig|6666666.64922.peg.735
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.32
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.1575
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.2148
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.64922.peg.1332
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.64922.peg.1409
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.64922.peg.593
Potassium_homeostasis	Potassium channel protein	fig|6666666.64922.peg.25
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.64922.peg.1594
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.64922.peg.1492
Proline,_4-hydroxyproline_uptake_and_utilization	L-Proline/Glycine betaine transporter ProP	fig|6666666.64922.peg.712
Proline,_4-hydroxyproline_uptake_and_utilization	L-Proline/Glycine betaine transporter ProP	fig|6666666.64922.peg.1718
Proline,_4-hydroxyproline_uptake_and_utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.64922.peg.467
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.64922.peg.1567
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.64922.peg.1225
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.64922.peg.1641
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.64922.peg.1634
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.64922.peg.1905
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.64922.peg.1002
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.64922.peg.502
Propionate-CoA_to_Succinate_Module	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.64922.peg.144
Propionate-CoA_to_Succinate_Module	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.64922.peg.142
Propionate-CoA_to_Succinate_Module	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.64922.peg.2188
Propionate-CoA_to_Succinate_Module	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.64922.peg.2188
Propionate-CoA_to_Succinate_Module	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.64922.peg.143
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.64922.peg.2214
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.64922.peg.2216
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.64922.peg.2215
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.64922.peg.2217
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.64922.peg.922
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.64922.peg.476
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.64922.peg.1687
Protein_chaperones	Chaperone protein DnaK	fig|6666666.64922.peg.474
Protein_chaperones	ClpB protein	fig|6666666.64922.peg.485
Protein_chaperones	Heat shock protein GrpE	fig|6666666.64922.peg.475
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.64922.peg.477
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.64922.peg.1776
Protein_deglycation	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.64922.peg.561
Protein_deglycation	Phytoene synthase (EC 2.5.1.32)	fig|6666666.64922.peg.562
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.64922.peg.1539
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.64922.peg.553
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.64922.peg.554
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.64922.peg.2114
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.64922.peg.166
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.64922.peg.167
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.64922.peg.1618
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.64922.peg.1553
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.64922.peg.1610
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.64922.peg.1611
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.64922.peg.566
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.64922.peg.485
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.64922.peg.572
Proteorhodopsin	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.64922.peg.561
Proteorhodopsin	Phytoene synthase (EC 2.5.1.32)	fig|6666666.64922.peg.562
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.64922.peg.1569
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.64922.peg.1612
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.64922.peg.1613
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.64922.peg.1468
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.64922.peg.601
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.64922.peg.602
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.64922.peg.2091
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.64922.peg.794
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.64922.peg.2089
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.64922.peg.155
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.64922.peg.248
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.64922.peg.596
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.64922.peg.1407
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.64922.peg.495
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.64922.peg.199
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.64922.peg.2135
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.64922.peg.542
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.64922.peg.200
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.64922.peg.201
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.64922.peg.563
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.64922.peg.88
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.64922.peg.1981
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.64922.peg.2183
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.64922.peg.1625
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.64922.peg.319
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.64922.peg.795
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.64922.peg.1303
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.64922.peg.1304
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.64922.peg.200
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.64922.peg.201
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.64922.peg.563
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.64922.peg.365
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.64922.peg.2059
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.64922.peg.1124
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.64922.peg.1635
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.64922.peg.2154
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.64922.peg.1464
Pyridoxin_(Vitamin_B6)_Biosynthesis	Predicted transcriptional regulator of pyridoxine metabolism	fig|6666666.64922.peg.170
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.64922.peg.1691
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	fig|6666666.64922.peg.168
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.64922.peg.169
Pyruvate_Alanine_Serine_Interconversions	Alanine dehydrogenase (EC 1.4.1.1)	fig|6666666.64922.peg.1592
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.64922.peg.221
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.64922.peg.1810
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.64922.peg.2040
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.64922.peg.2098
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.64922.peg.836
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.64922.peg.2041
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3)	fig|6666666.64922.peg.1122
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.64922.peg.423
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.64922.peg.140
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.64922.peg.1084
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.64922.peg.1901
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.64922.peg.503
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.64922.peg.1912
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.452
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.478
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.64922.peg.1727
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.64922.peg.791
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.64922.peg.502
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.64922.peg.1771
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.64922.peg.591
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.64922.peg.544
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.64922.peg.88
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.64922.peg.1981
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.64922.peg.2183
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.64922.peg.743
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.64922.peg.897
Queuosine-Archaeosine_Biosynthesis	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.64922.peg.2184
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.64922.peg.898
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.64922.peg.896
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.64922.peg.2113
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.64922.peg.854
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.64922.peg.2164
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.64922.peg.1656
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.64922.peg.2058
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.64922.peg.578
RNA_methylation	FIG011178: rRNA methylase	fig|6666666.64922.peg.1055
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.64922.peg.1256
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.64922.peg.1949
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.64922.peg.1688
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.64922.peg.715
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.64922.peg.1928
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.64922.peg.422
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.64922.peg.1158
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.714
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.64922.peg.2272
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.64922.peg.713
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.64922.peg.715
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.64922.peg.241
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.64922.peg.307
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.64922.peg.306
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.64922.peg.2136
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.64922.peg.7
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.64922.peg.1583
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.64922.peg.1975
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.64922.peg.1629
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.64922.peg.1909
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.64922.peg.348
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.64922.peg.1271
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.64922.peg.2269
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.64922.peg.1871
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.64922.peg.239
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.64922.peg.1979
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.64922.peg.1221
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.64922.peg.1222
RecA_and_RecX	RecA protein	fig|6666666.64922.peg.2003
RecA_and_RecX	Regulatory protein RecX	fig|6666666.64922.peg.2004
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.64922.peg.711
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.64922.peg.1984
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.64922.peg.2154
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.64922.peg.791
Redox-dependent_regulation_of_nucleus_processes	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.64922.peg.1365
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.64922.peg.1808
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.64922.peg.1552
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.64922.peg.434
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.64922.peg.728
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.64922.peg.723
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.64922.peg.381
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.64922.peg.2235
Respiratory_dehydrogenases_1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.64922.peg.467
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.64922.peg.813
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.64922.peg.2260
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.64922.peg.963
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.64922.peg.2036
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.64922.peg.964
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.64922.peg.964
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.64922.peg.965
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.64922.peg.2146
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.64922.peg.2144
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.64922.peg.2147
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.64922.peg.2144
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.64922.peg.1980
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.64922.peg.2146
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.64922.peg.1980
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.64922.peg.2145
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.64922.peg.2146
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.64922.peg.2144
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.64922.peg.2147
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.64922.peg.2206
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.64922.peg.2144
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.64922.peg.2146
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.64922.peg.2235
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.64922.peg.2133
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.64922.peg.2205
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.64922.peg.2145
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.64922.peg.2143
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.64922.peg.1088
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.64922.peg.2116
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.64922.peg.1937
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.64922.peg.1936
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.64922.peg.1936
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.64922.peg.1543
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.64922.peg.1545
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.64922.peg.677
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.64922.peg.1547
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.64922.peg.2027
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.64922.peg.678
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.64922.peg.1544
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.64922.peg.301
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.64922.peg.1402
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.64922.peg.254
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.64922.peg.311
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.64922.peg.315
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.64922.peg.231
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.64922.peg.268
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.64922.peg.252
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.64922.peg.281
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.64922.peg.240
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.64922.peg.255
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.64922.peg.1933
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.64922.peg.314
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.64922.peg.1057
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.64922.peg.1630
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.64922.peg.283
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.64922.peg.286
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.64922.peg.267
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.64922.peg.1356
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.64922.peg.1631
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.64922.peg.1415
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.64922.peg.280
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.64922.peg.285
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.64922.peg.253
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.64922.peg.1414
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.64922.peg.1413
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.64922.peg.1416
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.64922.peg.1416
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.64922.peg.718
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.64922.peg.1058
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.64922.peg.1542
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.64922.peg.288
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.64922.peg.287
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.64922.peg.266
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.64922.peg.256
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.64922.peg.310
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.64922.peg.653
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.64922.peg.47
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.64922.peg.1946
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.64922.peg.1943
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.64922.peg.1944
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.64922.peg.2082
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.64922.peg.2083
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.64922.peg.2084
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.64922.peg.1359
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.64922.peg.1286
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.64922.peg.1287
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.64922.peg.1285
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.64922.peg.1291
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.64922.peg.1293
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.64922.peg.1959
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.64922.peg.1960
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.64922.peg.739
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.64922.peg.1405
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.64922.peg.1714
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.64922.peg.2188
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.64922.peg.1463
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.64922.peg.1334
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.64922.peg.2210
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.64922.peg.1904
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.64922.peg.1620
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.64922.peg.181
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.64922.peg.181
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.64922.peg.121
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.64922.peg.407
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.64922.peg.1318
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.64922.peg.974
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.64922.peg.975
Serine-glyoxylate_cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.64922.peg.1716
Serine-glyoxylate_cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.64922.peg.1717
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.64922.peg.1124
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.64922.peg.1635
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.64922.peg.1464
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.64922.peg.1005
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.64922.peg.1549
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.64922.peg.1005
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.64922.peg.1549
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.64922.peg.1318
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.64922.peg.1870
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.64922.peg.297
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.64922.peg.222
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.64922.peg.1353
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.64922.peg.749
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.64922.peg.1353
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.64922.peg.748
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.64922.peg.750
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.64922.peg.750
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.64922.peg.750
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.64922.peg.93
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.64922.peg.93
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.64922.peg.93
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.64922.peg.228
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.64922.peg.2038
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.64922.peg.1870
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.64922.peg.1934
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.64922.peg.1935
Single-Rhodanese-domain_proteins	Glutathione S-transferase domain protein	fig|6666666.64922.peg.1136
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.64922.peg.664
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.64922.peg.1358
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.64922.peg.1367
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.64922.peg.199
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.64922.peg.207
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.64922.peg.526
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.64922.peg.188
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.64922.peg.1418
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.64922.peg.1488
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.64922.peg.2171
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.64922.peg.576
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.64922.peg.575
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.32
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.1575
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.64922.peg.2148
Stress_related_cluster	Arsenical pump-driving ATPase (EC 3.6.3.16)	fig|6666666.64922.peg.555
Stress_related_cluster	Carbon starvation protein A	fig|6666666.64922.peg.557
Stress_related_cluster	FIG059250: hypothetical protein	fig|6666666.64922.peg.556
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.64922.peg.2090
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.64922.peg.976
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.64922.peg.973
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.64922.peg.974
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.64922.peg.975
Sucrose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.64922.peg.272
Sucrose_utilization	PTS system, sucrose-specific IIA component (EC 2.7.1.69)	fig|6666666.64922.peg.269
Sucrose_utilization	PTS system, sucrose-specific IIB component (EC 2.7.1.69)	fig|6666666.64922.peg.269
Sucrose_utilization	PTS system, sucrose-specific IIC component (EC 2.7.1.69)	fig|6666666.64922.peg.269
Sucrose_utilization	Sucrose-6-phosphate hydrolase (EC 3.2.1.26)	fig|6666666.64922.peg.270
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.64922.peg.1020
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.64922.peg.1246
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.64922.peg.2188
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.64922.peg.1463
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.146
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.64922.peg.971
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.64922.peg.1246
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.64922.peg.1308
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.64922.peg.164
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.64922.peg.1620
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.64922.peg.1958
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.64922.peg.974
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.64922.peg.975
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.64922.peg.575
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.64922.peg.1825
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.64922.peg.1182
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.64922.peg.1548
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.64922.peg.1815
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.64922.peg.1817
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.64922.peg.299
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.64922.peg.299
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.64922.peg.2059
Thiamin_biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.64922.peg.1041
Thiamin_biosynthesis	Hydroxyethylthiazole kinase (EC 2.7.1.50)	fig|6666666.64922.peg.2236
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.64922.peg.305
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.64922.peg.858
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.64922.peg.1044
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.64922.peg.1040
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.64922.peg.2237
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.64922.peg.1088
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.64922.peg.1043
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.64922.peg.303
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.64922.peg.2031
Thioredoxin-disulfide_reductase	Alkylhydroperoxidase protein D	fig|6666666.64922.peg.2032
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.64922.peg.2030
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.64922.peg.1574
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.64922.peg.2095
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.64922.peg.709
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.64922.peg.1121
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.64922.peg.1347
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.64922.peg.503
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.64922.peg.502
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.64922.peg.836
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.64922.peg.2041
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.64922.peg.446
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.64922.peg.919
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.64922.peg.918
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.64922.peg.1207
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.64922.peg.1206
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.64922.peg.1791
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.64922.peg.309
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.64922.peg.1931
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.64922.peg.316
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.64922.peg.1324
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.64922.peg.1186
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.64922.peg.1972
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.64922.peg.2116
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.64922.peg.1340
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.64922.peg.2050
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.64922.peg.2038
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.64922.peg.38
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.64922.peg.1251
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.64922.peg.1412
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.64922.peg.299
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.64922.peg.2115
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.64922.peg.299
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.64922.peg.1657
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.64922.peg.2115
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.64922.peg.1944
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.64922.peg.298
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.64922.peg.2141
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.64922.peg.1974
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.64922.peg.245
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.64922.peg.1973
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.64922.peg.1059
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.64922.peg.247
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.64922.peg.1955
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.64922.peg.1185
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.64922.peg.1492
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.64922.peg.1371
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.64922.peg.514
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.64922.peg.2140
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.64922.peg.1358
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.64922.peg.1367
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.64922.peg.1946
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.64922.peg.1488
Trehalose_Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.64922.peg.587
Trehalose_Biosynthesis	Trehalose synthase (EC 5.4.99.16)	fig|6666666.64922.peg.117
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.64922.peg.585
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.64922.peg.1957
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.64922.peg.389
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.64922.peg.619
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.64922.peg.688
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.64922.peg.687
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.64922.peg.686
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.64922.peg.689
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.64922.peg.1899
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.64922.peg.390
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.64922.peg.390
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.64922.peg.689
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.64922.peg.691
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.64922.peg.690
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.64922.peg.2220
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.64922.peg.1249
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.64922.peg.2221
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.64922.peg.557
Type_VI_secretion_systems	ClpB protein	fig|6666666.64922.peg.485
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.64922.peg.222
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.64922.peg.1353
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.64922.peg.1353
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.64922.peg.228
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.64922.peg.988
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.64922.peg.641
USS-DB-7	ClpB protein	fig|6666666.64922.peg.485
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.64922.peg.1820
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.64922.peg.1819
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.64922.peg.1818
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.64922.peg.2063
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.64922.peg.2181
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.64922.peg.1991
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.64922.peg.952
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.64922.peg.1087
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.64922.peg.67
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiD	fig|6666666.64922.peg.205
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.64922.peg.35
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.64922.peg.930
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.64922.peg.1391
YjeE	NAD(P)HX dehydratase	fig|6666666.64922.peg.667
YjeE	NAD(P)HX epimerase	fig|6666666.64922.peg.667
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.64922.peg.570
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.64922.peg.577
Zinc_regulated_enzymes	Dihydroorotase (EC 3.5.2.3)	fig|6666666.64922.peg.2130
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.64922.peg.544
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.64922.peg.711
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.64922.peg.1984
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.64922.peg.1897
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.64922.peg.1010
Zinc_regulated_enzymes	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.64922.peg.871
Zinc_regulated_enzymes	Zinc uptake regulation protein ZUR	fig|6666666.64922.peg.1696
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.64922.peg.1188
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.64922.peg.860
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.64922.peg.1192
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.64922.peg.1190
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.64922.peg.862
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.64922.peg.859
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.64922.peg.1610
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.64922.peg.1611
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.64922.peg.2089
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.64922.peg.956
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.64922.peg.934
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.64922.peg.963
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.64922.peg.964
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.64922.peg.964
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.64922.peg.69
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.64922.peg.965
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.64922.peg.1162
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.64922.peg.2174
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.405
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.959
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.991
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.992
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.994
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.64922.peg.1679
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.588
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.64922.peg.953
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.64922.peg.654
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.64922.peg.2146
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.64922.peg.1980
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.64922.peg.1980
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.64922.peg.2145
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.64922.peg.2105
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.64922.peg.1209
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.64922.peg.2102
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.64922.peg.1148
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.64922.peg.1141
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.64922.peg.1149
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.64922.peg.2102
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.64922.peg.577
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.64922.peg.1111
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.64922.peg.1148
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.64922.peg.1141
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.64922.peg.1149
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.64922.peg.1111
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.64922.peg.1698
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.64922.peg.2097
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.64922.peg.1858
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.64922.peg.680
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.64922.peg.559
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.64922.peg.1394
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.64922.peg.1054
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.64922.peg.1053
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.64922.peg.379
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.64922.peg.2073
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.64922.peg.158
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.64922.peg.1037
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.64922.peg.1621
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.64922.peg.701
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.64922.peg.2060
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.64922.peg.717
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.64922.peg.1559
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.64922.peg.239
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.64922.peg.1979
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.64922.peg.2005
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.64922.peg.885
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.64922.peg.1656
tRNAs	tRNA-Ala-GGC	fig|6666666.64922.rna.44
tRNAs	tRNA-Arg-ACG	fig|6666666.64922.rna.23
tRNAs	tRNA-Arg-CCG	fig|6666666.64922.rna.33
tRNAs	tRNA-Cys-GCA	fig|6666666.64922.rna.58
tRNAs	tRNA-Gly-CCC	fig|6666666.64922.rna.6
tRNAs	tRNA-Gly-GCC	fig|6666666.64922.rna.55
tRNAs	tRNA-Gly-GCC	fig|6666666.64922.rna.57
tRNAs	tRNA-Gly-GCC	fig|6666666.64922.rna.60
tRNAs	tRNA-Leu-CAA	fig|6666666.64922.rna.30
tRNAs	tRNA-Leu-CAG	fig|6666666.64922.rna.20
tRNAs	tRNA-Leu-GAG	fig|6666666.64922.rna.61
tRNAs	tRNA-Phe-GAA	fig|6666666.64922.rna.12
tRNAs	tRNA-Pro-CGG	fig|6666666.64922.rna.26
tRNAs	tRNA-Pro-GGG	fig|6666666.64922.rna.62
tRNAs	tRNA-Ser-CGA	fig|6666666.64922.rna.24
tRNAs	tRNA-Ser-GGA	fig|6666666.64922.rna.25
tRNAs	tRNA-Trp-CCA	fig|6666666.64922.rna.2
tRNAs	tRNA-Val-CAC	fig|6666666.64922.rna.54
tRNAs	tRNA-Val-GAC	fig|6666666.64922.rna.56
tRNAs	tRNA-Val-GAC	fig|6666666.64922.rna.59