16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.540
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1517
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1604
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.65896.peg.1605
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.65896.peg.1607
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.65896.peg.1606
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.65896.peg.440
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65896.peg.1181
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65896.peg.521
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65896.peg.1156
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65896.peg.867
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65896.peg.1049
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65896.peg.1302
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65896.peg.1038
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65896.peg.1033
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65896.peg.1169
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65896.peg.1168
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65896.peg.1132
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65896.peg.385
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65896.peg.870
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65896.peg.228
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.65896.peg.85
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65896.peg.86
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65896.peg.6
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.65896.peg.5
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.65896.peg.87
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.65896.peg.3
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.65896.peg.4
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.65896.peg.1267
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.65896.peg.319
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65896.peg.433
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65896.peg.895
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.65896.peg.288
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65896.peg.287
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65896.peg.415
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65896.peg.1593
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65896.peg.889
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	FIG021574: Possible membrane protein related to de Novo purine biosynthesis	fig|6666666.65896.peg.1167
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65896.peg.1169
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65896.peg.1169
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65896.peg.1168
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65896.peg.246
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65896.peg.245
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65896.peg.246
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65896.peg.245
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65896.peg.530
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.65896.peg.1003
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65896.peg.1632
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65896.peg.266
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65896.peg.1324
Alkanesulfonate_assimilation	FMN reductase (EC 1.5.1.29)	fig|6666666.65896.peg.1402
Alkanesulfonates_Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.65896.peg.1402
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65896.peg.1554
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65896.peg.1076
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65896.peg.1221
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65896.peg.1223
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65896.peg.1633
Ammonia_assimilation	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)	fig|6666666.65896.peg.471
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65896.peg.1145
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1144
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1640
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.65896.peg.1543
Ammonia_assimilation	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.65896.peg.1542
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65896.peg.195
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65896.peg.194
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65896.peg.192
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65896.peg.190
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65896.peg.191
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65896.peg.196
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65896.peg.197
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65896.peg.196
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65896.peg.193
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65896.peg.195
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65896.peg.194
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65896.peg.192
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65896.peg.190
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65896.peg.191
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65896.peg.196
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65896.peg.197
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65896.peg.196
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65896.peg.193
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65896.peg.192
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.65896.peg.408
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65896.peg.193
Aromatic_amino_acid_degradation	Aromatic amino acid transport protein AroP	fig|6666666.65896.peg.342
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65896.peg.343
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65896.peg.344
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65896.peg.479
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65896.peg.480
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65896.peg.482
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65896.peg.481
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.399
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.859
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.1360
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65896.peg.758
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.540
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1517
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1604
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.65896.peg.1490
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.65896.peg.1605
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.65896.peg.1596
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65896.peg.541
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65896.peg.1599
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.65896.peg.18
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65896.peg.1595
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.65896.peg.1607
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65896.peg.19
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65896.peg.855
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.65896.peg.130
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.497
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.1246
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.65896.peg.61
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.65896.peg.1060
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65896.peg.1544
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.65896.peg.1606
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65896.peg.1076
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.399
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.859
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.1360
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.540
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1517
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1604
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.65896.peg.1490
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.65896.peg.1605
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.65896.peg.1596
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65896.peg.541
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65896.peg.1599
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65896.peg.1595
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.65896.peg.1607
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.497
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.1246
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65896.peg.496
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.65896.peg.1060
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65896.peg.497
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65896.peg.1246
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.65896.peg.496
Bacterial_hemoglobins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65896.peg.705
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65896.peg.1544
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.65896.peg.1541
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65896.peg.1388
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.65896.peg.1128
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.65896.peg.167
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.65896.peg.1454
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65896.peg.909
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65896.peg.908
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65896.peg.910
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65896.peg.907
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.65896.peg.1428
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65896.peg.1135
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65896.peg.1334
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65896.peg.1484
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65896.peg.1066
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65896.peg.71
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65896.peg.881
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65896.peg.1226
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.65896.peg.1568
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65896.peg.1483
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65896.peg.1485
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65896.peg.1091
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65896.peg.613
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65896.peg.234
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65896.peg.233
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65896.peg.239
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65896.peg.246
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65896.peg.245
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65896.peg.1632
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.65896.peg.249
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65896.peg.244
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.65896.peg.1575
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.65896.peg.1257
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.65896.peg.1140
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.65896.peg.1138
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.65896.peg.1139
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65896.peg.1503
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.65896.peg.1504
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.65896.peg.1505
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65896.peg.1499
CBSS-1496.1.peg.2937	FIG116849: hypothetical protein	fig|6666666.65896.peg.1348
CBSS-1496.1.peg.2937	FIG131328: Predicted ATP-dependent endonuclease of the OLD family	fig|6666666.65896.peg.1347
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65896.peg.1136
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.65896.peg.60
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65896.peg.1372
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65896.peg.1410
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.65896.peg.61
CBSS-176299.4.peg.1292	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65896.peg.157
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65896.peg.1550
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65896.peg.1535
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.65896.peg.1330
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.65896.peg.1331
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65896.peg.1334
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65896.peg.1325
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.65896.peg.1327
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.65896.peg.1326
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.65896.peg.1328
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65896.peg.909
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65896.peg.908
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65896.peg.910
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65896.peg.905
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65896.peg.907
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65896.peg.1244
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65896.peg.680
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.65896.peg.615
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65896.peg.1091
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.65896.peg.288
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65896.peg.287
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.65896.peg.1574
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65896.peg.1537
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.65896.peg.725
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65896.peg.1407
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65896.peg.633
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65896.peg.223
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65896.peg.291
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.655
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.790
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.65896.peg.1530
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.65896.peg.1252
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.857
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.1456
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65896.peg.911
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65896.peg.980
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65896.peg.1516
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.65896.peg.1527
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.65896.peg.1526
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.65896.peg.1542
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65896.peg.1250
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.65896.peg.1247
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.65896.peg.1249
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65896.peg.453
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65896.peg.494
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65896.peg.1145
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65896.peg.155
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65896.peg.1627
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65896.peg.1625
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65896.peg.1135
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65896.peg.1334
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65896.peg.293
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.65896.peg.1529
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65896.peg.1209
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.65896.peg.1340
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65896.peg.1341
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65896.peg.1406
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65896.peg.1244
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65896.peg.1453
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.65896.peg.48
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.65896.peg.1138
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.65896.peg.1445
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65896.peg.243
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65896.peg.1582
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65896.peg.1164
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.65896.peg.260
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65896.peg.266
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.65896.peg.984
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.65896.peg.1087
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.65896.peg.1241
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.65896.peg.1242
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.65896.peg.1243
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.65896.peg.1240
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.65896.peg.1239
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.65896.peg.630
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.65896.peg.631
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.65896.peg.632
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65896.peg.633
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65896.peg.63
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65896.peg.1266
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65896.peg.65
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65896.peg.65
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65896.peg.266
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65896.peg.755
CBSS-89187.3.peg.2957	Glutathione S-transferase domain protein	fig|6666666.65896.peg.253
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65896.peg.1367
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65896.peg.738
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65896.peg.1368
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.65896.peg.185
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.65896.peg.186
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65896.peg.379
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65896.peg.717
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65896.peg.1343
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65896.peg.421
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65896.peg.1342
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65896.peg.131
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65896.peg.1365
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.65896.peg.1335
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65896.peg.1341
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.65896.peg.366
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.65896.peg.367
Campylobacter_Iron_Metabolism	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.65896.peg.448
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65896.peg.913
Carbon_Starvation	Carbon starvation protein A	fig|6666666.65896.peg.1035
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65896.peg.735
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.399
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.859
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.1360
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65896.peg.758
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65896.peg.757
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65896.peg.417
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65896.peg.420
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65896.peg.1573
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.65896.peg.215
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65896.peg.1537
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.65896.peg.411
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.65896.peg.1594
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.65896.peg.1596
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65896.peg.1595
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.65896.peg.1592
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.65896.peg.1591
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.65896.peg.1590
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65896.peg.1593
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65896.peg.1597
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65896.peg.1072
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65896.peg.1205
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65896.peg.850
Chitin_and_N-acetylglucosamine_utilization	Chitinase (EC 3.2.1.14)	fig|6666666.65896.peg.109
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65896.peg.782
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65896.peg.92
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65896.peg.439
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65896.peg.479
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65896.peg.478
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65896.peg.477
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65896.peg.480
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65896.peg.1561
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.65896.peg.237
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65896.peg.803
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65896.peg.480
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65896.peg.482
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65896.peg.481
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65896.peg.1614
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65896.peg.1386
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65896.peg.1387
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65896.peg.1102
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65896.peg.594
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65896.peg.1163
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65896.peg.1389
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65896.peg.1206
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65896.peg.1391
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.65896.peg.328
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65896.peg.1388
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65896.peg.1293
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.65896.peg.1289
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.65896.peg.1285
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.65896.peg.1288
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65896.peg.1291
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65896.peg.1292
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65896.peg.1290
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.65896.peg.1287
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.65896.peg.1286
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65896.peg.1394
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.65896.peg.1392
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.65896.peg.1393
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65896.peg.1391
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.65896.peg.1393
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65896.peg.66
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65896.peg.243
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.65896.peg.1152
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.65896.peg.213
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65896.peg.244
Coenzyme_A_Biosynthesis	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65896.peg.765
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65896.peg.766
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.65896.peg.386
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65896.peg.223
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.65896.peg.1371
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.65896.peg.1371
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65896.peg.680
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.65896.peg.649
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.65896.peg.42
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65896.peg.1614
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65896.peg.1386
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65896.peg.1387
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65896.peg.1102
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65896.peg.1389
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65896.peg.1391
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.65896.peg.328
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65896.peg.1388
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65896.peg.783
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65896.peg.828
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.65896.peg.634
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65896.peg.454
Copper_Transport_System	Repressor CsoR of the copZA operon	fig|6666666.65896.peg.827
Copper_homeostasis	Copper chaperone	fig|6666666.65896.peg.262
Copper_homeostasis	Copper resistance protein D	fig|6666666.65896.peg.140
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65896.peg.454
Copper_homeostasis	Multicopper oxidase	fig|6666666.65896.peg.413
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.65896.peg.775
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65896.peg.829
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65896.peg.828
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.65896.peg.557
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.65896.peg.1173
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65896.peg.256
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65896.peg.1554
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65896.peg.1554
D-gluconate_and_ketogluconates_metabolism	5-keto-D-gluconate 5-reductase (EC 1.1.1.69)	fig|6666666.65896.peg.1053
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65896.peg.1268
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.65896.peg.152
D-gluconate_and_ketogluconates_metabolism	L-idonate 5-dehydrogenase (EC 1.1.1.264)	fig|6666666.65896.peg.1054
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.65896.peg.1052
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.65896.peg.1645
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65896.peg.131
D-ribose_utilization	Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)	fig|6666666.65896.peg.1646
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.65896.peg.1644
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.65896.peg.1643
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65896.peg.1453
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.65896.peg.260
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.65896.peg.217
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.65896.peg.634
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65896.peg.1161
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65896.peg.1549
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.65896.peg.227
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65896.peg.513
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65896.peg.507
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.65896.peg.605
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.65896.peg.606
DNA_processing_cluster	Recombination protein RecR	fig|6666666.65896.peg.608
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.65896.peg.207
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.65896.peg.212
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.65896.peg.1359
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.65896.peg.1586
DNA_repair,_bacterial	DNA polymerase IV-like protein ImuB	fig|6666666.65896.peg.1024
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.65896.peg.372
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.65896.peg.777
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.65896.peg.1241
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65896.peg.736
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65896.peg.1039
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65896.peg.375
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65896.peg.376
DNA_repair,_bacterial	RecA protein	fig|6666666.65896.peg.1481
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65896.peg.1465
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65896.peg.139
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65896.peg.459
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.65896.peg.174
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.65896.peg.1112
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.65896.peg.1113
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.65896.peg.505
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.65896.peg.60
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.65896.peg.1481
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.65896.peg.608
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65896.peg.139
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65896.peg.459
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.65896.peg.1481
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65896.peg.1465
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65896.peg.1164
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.65896.peg.1116
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.65896.peg.1481
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.65896.peg.1480
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65896.peg.1534
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.65896.peg.503
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65896.peg.513
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65896.peg.507
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.65896.peg.504
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.65896.peg.505
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.65896.peg.568
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.65896.peg.514
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65896.peg.1573
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.65896.peg.506
DNA_replication_strays	DNA polymerase IV-like protein ImuB	fig|6666666.65896.peg.1024
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.65896.peg.1546
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.655
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.790
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65896.peg.513
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65896.peg.507
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65896.peg.798
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.65896.peg.816
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65896.peg.1169
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.65896.peg.797
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.65896.peg.1068
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.65896.peg.1070
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.65896.peg.802
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65896.peg.1169
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.65896.peg.817
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.65896.peg.811
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.65896.peg.812
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.65896.peg.813
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65896.peg.1168
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.65896.peg.722
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65896.peg.415
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.65896.peg.1379
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.65896.peg.1376
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.65896.peg.1377
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.65896.peg.1378
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.65896.peg.1308
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.65896.peg.713
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65896.peg.1375
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.65896.peg.1380
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65896.peg.1046
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65896.peg.1380
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.65896.peg.1309
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65896.peg.654
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65896.peg.716
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65896.peg.329
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65896.peg.1633
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65896.peg.1635
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65896.peg.329
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65896.peg.1132
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribonucleoside regulator DeoR (transcriptional repressor)	fig|6666666.65896.peg.528
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.65896.peg.532
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.65896.peg.875
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65896.peg.530
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.65896.peg.1645
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.65896.peg.1443
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65896.peg.898
EC699-706	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65896.peg.425
EC699-706	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65896.peg.425
EC699-706	Lactam utilization protein LamB	fig|6666666.65896.peg.424
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65896.peg.1484
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65896.peg.355
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65896.peg.1483
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65896.peg.356
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65896.peg.1485
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65896.peg.354
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65896.peg.1339
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.65896.peg.404
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.65896.peg.152
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65896.peg.1337
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65896.peg.1343
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.65896.peg.1338
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65896.peg.1342
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65896.peg.883
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65896.peg.1444
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65896.peg.1559
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.65896.peg.725
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65896.peg.724
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65896.peg.1062
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65896.peg.1228
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65896.peg.1062
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65896.peg.1228
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65896.peg.426
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65896.peg.1056
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65896.peg.426
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65896.peg.1056
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65896.peg.157
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.65896.peg.1227
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65896.peg.725
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65896.peg.1203
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65896.peg.724
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.65896.peg.725
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65896.peg.521
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65896.peg.1203
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65896.peg.724
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65896.peg.88
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65896.peg.89
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.65896.peg.90
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.65896.peg.1445
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.540
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1517
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1604
Flavohaemoglobin	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65896.peg.705
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65896.peg.762
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65896.peg.1181
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65896.peg.1156
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.65896.peg.119
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65896.peg.761
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65896.peg.760
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.65896.peg.119
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65896.peg.759
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65896.peg.803
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.65896.peg.1157
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.65896.peg.1493
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65896.peg.762
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65896.peg.758
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65896.peg.761
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65896.peg.760
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.65896.peg.763
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65896.peg.759
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65896.peg.757
Folate_biosynthesis_cluster	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65896.peg.765
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65896.peg.766
Folate_biosynthesis_cluster	membrane-flanked domain	fig|6666666.65896.peg.1031
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.65896.peg.1030
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.65896.peg.1468
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.65896.peg.1469
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.65896.peg.1469
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.65896.peg.1469
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65896.peg.1467
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.65896.peg.1336
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.65896.peg.1466
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Urease accessory protein UreD	fig|6666666.65896.peg.693
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Urease accessory protein UreE	fig|6666666.65896.peg.690
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Urease accessory protein UreF	fig|6666666.65896.peg.691
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Urease accessory protein UreG	fig|6666666.65896.peg.692
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Urease alpha subunit (EC 3.5.1.5)	fig|6666666.65896.peg.689
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Urease beta subunit (EC 3.5.1.5)	fig|6666666.65896.peg.688
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Urease gamma subunit (EC 3.5.1.5)	fig|6666666.65896.peg.687
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.65896.peg.418
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65896.peg.1628
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.65896.peg.562
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65896.peg.1553
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65896.peg.1628
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65896.peg.680
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.65896.peg.1303
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)	fig|6666666.65896.peg.471
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65896.peg.168
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.65896.peg.151
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1144
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1640
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65896.peg.727
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65896.peg.1585
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65896.peg.1553
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1144
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1640
Glutaredoxins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65896.peg.705
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65896.peg.180
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65896.peg.1406
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65896.peg.180
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.65896.peg.823
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.65896.peg.882
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.65896.peg.1304
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.65896.peg.390
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.65896.peg.348
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.65896.peg.1515
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65896.peg.1554
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65896.peg.1559
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65896.peg.385
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65896.peg.106
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65896.peg.240
Glycine_and_Serine_Utilization	D-serine dehydratase (EC 4.3.1.18)	fig|6666666.65896.peg.707
Glycine_and_Serine_Utilization	D-serine permease DsdX	fig|6666666.65896.peg.706
Glycine_and_Serine_Utilization	D-serine/D-alanine/glycine transporter	fig|6666666.65896.peg.1009
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65896.peg.1554
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65896.peg.1404
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65896.peg.34
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.175
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.640
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.893
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65896.peg.385
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65896.peg.1209
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65896.peg.453
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65896.peg.494
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65896.peg.447
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65896.peg.493
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65896.peg.256
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.65896.peg.404
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65896.peg.379
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65896.peg.717
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65896.peg.1162
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65896.peg.1343
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65896.peg.421
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65896.peg.1342
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65896.peg.883
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65896.peg.1444
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65896.peg.1559
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65896.peg.1341
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65896.peg.256
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.65896.peg.404
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65896.peg.379
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65896.peg.1162
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65896.peg.1342
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65896.peg.883
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65896.peg.1559
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65896.peg.1341
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.65896.peg.60
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.65896.peg.61
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65896.peg.56
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65896.peg.63
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65896.peg.1266
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65896.peg.65
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.65896.peg.57
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65896.peg.1315
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65896.peg.33
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65896.peg.122
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65896.peg.67
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65896.peg.700
GroEL_GroES	Chaperone protein DnaK	fig|6666666.65896.peg.697
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65896.peg.749
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65896.peg.1011
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.65896.peg.1010
GroEL_GroES	Heat shock protein GrpE	fig|6666666.65896.peg.698
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.65896.peg.68
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65896.peg.67
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65896.peg.700
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.65896.peg.697
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.65896.peg.698
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.65896.peg.68
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.65896.peg.701
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65896.peg.165
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65896.peg.166
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65896.peg.66
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65896.peg.1573
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.65896.peg.93
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.65896.peg.440
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.65896.peg.17
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.65896.peg.268
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.65896.peg.1312
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65896.peg.905
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65896.peg.895
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65896.peg.236
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.65896.peg.1432
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.65896.peg.896
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.65896.peg.899
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.65896.peg.903
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.65896.peg.902
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65896.peg.898
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.65896.peg.898
Hfl_operon	GTP-binding protein HflX	fig|6666666.65896.peg.1472
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65896.peg.884
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65896.peg.885
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.65896.peg.824
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65896.peg.235
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65896.peg.1440
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65896.peg.165
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.65896.peg.505
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.65896.peg.568
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.65896.peg.346
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65896.peg.723
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65896.peg.1029
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65896.peg.1578
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.655
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.790
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65896.peg.49
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65896.peg.65
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.65896.peg.143
Inteins	Translation initiation factor 2	fig|6666666.65896.peg.1505
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65896.peg.266
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65896.peg.1324
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.65896.peg.820
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.65896.peg.819
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65896.peg.1325
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.65896.peg.1327
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.65896.peg.1326
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.65896.peg.1328
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.65896.peg.1322
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.65896.peg.1323
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.65896.peg.1629
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.65896.peg.368
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.65896.peg.366
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.65896.peg.367
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65896.peg.1632
Isoleucine_degradation	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65896.peg.1635
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65896.peg.1520
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65896.peg.1436
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65896.peg.1518
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65896.peg.781
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65896.peg.780
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65896.peg.433
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65896.peg.374
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65896.peg.931
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65896.peg.76
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65896.peg.76
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.65896.peg.1539
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.65896.peg.1540
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65896.peg.1095
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65896.peg.1136
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.65896.peg.1213
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.65896.peg.939
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.65896.peg.934
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65896.peg.935
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65896.peg.940
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.65896.peg.932
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.65896.peg.933
Lactate_utilization	L-lactate permease	fig|6666666.65896.peg.295
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.65896.peg.1096
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65896.peg.1095
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.65896.peg.1094
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.857
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.1456
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65896.peg.1141
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.857
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.1456
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65896.peg.613
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65896.peg.234
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65896.peg.233
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65896.peg.239
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65896.peg.1632
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65896.peg.1632
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65896.peg.1635
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65896.peg.867
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65896.peg.1049
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65896.peg.1280
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.65896.peg.1281
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65896.peg.860
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65896.peg.1279
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.65896.peg.1278
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.65896.peg.1637
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65896.peg.1636
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.65896.peg.1637
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65896.peg.1636
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65896.peg.1582
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.65896.peg.1560
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.65896.peg.1460
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.65896.peg.1460
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65896.peg.616
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.65896.peg.615
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65896.peg.293
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.65896.peg.1050
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65896.peg.1125
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65896.peg.1556
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.65896.peg.345
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.65896.peg.267
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.65896.peg.268
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65896.peg.63
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65896.peg.1266
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.65896.peg.590
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65896.peg.1467
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.65896.peg.1080
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.65896.peg.1085
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65896.peg.533
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65896.peg.1084
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65896.peg.929
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65896.peg.929
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65896.peg.929
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.65896.peg.926
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.65896.peg.923
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65896.peg.925
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.65896.peg.918
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65896.peg.929
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65896.peg.755
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.65896.peg.1454
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65896.peg.1603
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65896.peg.1602
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65896.peg.285
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.65896.peg.79
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65896.peg.829
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65896.peg.292
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65896.peg.291
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.65896.peg.1027
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.65896.peg.1026
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65896.peg.1028
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65896.peg.1370
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65896.peg.828
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.65896.peg.1027
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.65896.peg.1026
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65896.peg.1028
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65896.peg.1132
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65896.peg.1370
Methylcitrate_cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65896.peg.1315
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65896.peg.1406
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65896.peg.1479
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65896.peg.759
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65896.peg.1362
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.65896.peg.306
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65896.peg.297
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65896.peg.303
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65896.peg.299
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65896.peg.305
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.65896.peg.302
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.65896.peg.307
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.65896.peg.307
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65896.peg.298
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65896.peg.304
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65896.peg.1183
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.65896.peg.300
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65896.peg.925
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65896.peg.624
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65896.peg.747
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65896.peg.624
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65896.peg.747
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65896.peg.623
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65896.peg.746
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65896.peg.622
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65896.peg.745
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65896.peg.621
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65896.peg.744
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65896.peg.620
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65896.peg.743
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65896.peg.619
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65896.peg.742
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65896.peg.755
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65896.peg.495
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65896.peg.942
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65896.peg.943
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.65896.peg.203
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.65896.peg.204
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.65896.peg.205
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.65896.peg.947
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.65896.peg.948
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.65896.peg.949
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.65896.peg.950
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65896.peg.256
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65896.peg.850
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.857
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.1456
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65896.peg.1244
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.65896.peg.1240
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.65896.peg.182
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65896.peg.173
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.65896.peg.104
NAD_regulation	NAD synthetase (EC 6.3.1.5)	fig|6666666.65896.peg.182
NAD_regulation	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65896.peg.173
NAD_regulation	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.65896.peg.104
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65896.peg.92
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65896.peg.439
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65896.peg.1520
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65896.peg.1436
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65896.peg.1518
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65896.peg.781
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65896.peg.780
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65896.peg.433
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65896.peg.374
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.65896.peg.407
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65896.peg.1244
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65896.peg.1440
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.65896.peg.636
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.65896.peg.653
NusA-TFII_Cluster	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65896.peg.1506
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.65896.peg.1508
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.65896.peg.1504
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.65896.peg.1507
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.65896.peg.1505
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65896.peg.1181
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65896.peg.1302
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65896.peg.1033
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65896.peg.1033
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.65896.peg.618
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.65896.peg.469
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.65896.peg.1460
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.65896.peg.469
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.65896.peg.469
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.65896.peg.1201
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.65896.peg.57
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65896.peg.1268
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65896.peg.1339
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65896.peg.1337
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65896.peg.131
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65896.peg.415
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65896.peg.1365
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.65896.peg.1336
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.65896.peg.1335
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65896.peg.1202
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65896.peg.1431
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.540
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1517
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65896.peg.1604
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65896.peg.230
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65896.peg.755
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65896.peg.414
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65896.peg.168
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1144
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65896.peg.1640
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65896.peg.462
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65896.peg.463
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65896.peg.629
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65896.peg.414
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.65896.peg.1601
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65896.peg.879
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65896.peg.831
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.65896.peg.1598
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65896.peg.1597
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65896.peg.1600
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65896.peg.1603
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65896.peg.1602
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65896.peg.230
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65896.peg.1597
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65896.peg.1600
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65896.peg.1603
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65896.peg.1602
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.65896.peg.491
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.65896.peg.535
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65896.peg.534
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65896.peg.908
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65896.peg.594
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.65896.peg.588
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65896.peg.1163
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65896.peg.1206
Phenylpropanoid_compound_degradation	vannilate transporter VanK	fig|6666666.65896.peg.126
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65896.peg.884
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65896.peg.885
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65896.peg.397
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65896.peg.887
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.65896.peg.754
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65896.peg.884
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65896.peg.885
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65896.peg.65
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65896.peg.65
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.65896.peg.824
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.65896.peg.920
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65896.peg.883
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.65896.peg.102
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.497
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.1246
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65896.peg.496
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65896.peg.168
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.65896.peg.1495
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65896.peg.488
Polyamine_Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.65896.peg.408
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65896.peg.397
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65896.peg.887
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65896.peg.1444
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.65896.peg.752
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.399
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.859
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.1360
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.65896.peg.398
Potassium_homeostasis	Kup system potassium uptake protein	fig|6666666.65896.peg.364
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.65896.peg.1179
Potassium_homeostasis	Potassium channel protein	fig|6666666.65896.peg.1115
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.65896.peg.937
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.65896.peg.937
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.65896.peg.20
Proline,_4-hydroxyproline_uptake_and_utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65896.peg.670
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.65896.peg.669
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.65896.peg.105
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.65896.peg.107
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65896.peg.1553
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65896.peg.889
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65896.peg.724
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65896.peg.1293
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65896.peg.1291
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65896.peg.1292
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65896.peg.1290
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.65896.peg.618
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65896.peg.67
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65896.peg.700
Protein_chaperones	Chaperone protein DnaK	fig|6666666.65896.peg.697
Protein_chaperones	ClpB protein	fig|6666666.65896.peg.709
Protein_chaperones	Heat shock protein GrpE	fig|6666666.65896.peg.698
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.65896.peg.701
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65896.peg.1136
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.65896.peg.1385
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.65896.peg.74
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.65896.peg.124
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.65896.peg.172
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65896.peg.128
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65896.peg.129
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.65896.peg.773
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.65896.peg.709
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.65896.peg.777
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.65896.peg.556
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.65896.peg.38
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65896.peg.1411
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.65896.peg.979
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65896.peg.798
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.65896.peg.720
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65896.peg.1018
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.65896.peg.1373
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65896.peg.757
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65896.peg.1015
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65896.peg.1016
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65896.peg.198
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65896.peg.1497
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.65896.peg.116
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65896.peg.530
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.65896.peg.1273
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65896.peg.375
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65896.peg.376
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65896.peg.1015
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65896.peg.1016
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65896.peg.1202
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65896.peg.1436
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65896.peg.106
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65896.peg.240
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65896.peg.1343
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65896.peg.34
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.65896.peg.62
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.65896.peg.1003
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65896.peg.1632
Pyruvate_Alanine_Serine_Interconversions	D-serine dehydratase (EC 4.3.1.18)	fig|6666666.65896.peg.707
Pyruvate_Alanine_Serine_Interconversions	D-serine/D-alanine/glycine transporter	fig|6666666.65896.peg.1009
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65896.peg.1404
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.65896.peg.787
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3)	fig|6666666.65896.peg.238
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.65896.peg.840
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.65896.peg.1051
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65896.peg.1559
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65896.peg.725
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.65896.peg.1547
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65896.peg.724
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate decarboxylase (EC 4.1.1.1)	fig|6666666.65896.peg.1355
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65896.peg.1132
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.65896.peg.793
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65896.peg.759
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65896.peg.198
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65896.peg.1497
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65896.peg.534
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.65896.peg.601
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.65896.peg.602
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.65896.peg.600
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65896.peg.1386
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65896.peg.586
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65896.peg.1333
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65896.peg.94
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.65896.peg.1437
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.65896.peg.784
RNA_methylation	FIG011178: rRNA methylase	fig|6666666.65896.peg.202
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.65896.peg.338
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.65896.peg.1522
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65896.peg.66
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65896.peg.498
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.65896.peg.1538
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.65896.peg.837
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.65896.peg.264
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.497
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65896.peg.1246
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65896.peg.496
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65896.peg.498
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.65896.peg.985
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65896.peg.942
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65896.peg.943
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65896.peg.1372
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.65896.peg.144
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65896.peg.1503
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.65896.peg.114
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65896.peg.1550
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65896.peg.1187
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65896.peg.1250
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.65896.peg.1581
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65896.peg.987
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65896.peg.1499
RecA_and_RecX	RecA protein	fig|6666666.65896.peg.1481
RecA_and_RecX	Regulatory protein RecX	fig|6666666.65896.peg.1480
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65896.peg.495
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.65896.peg.851
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65896.peg.513
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65896.peg.507
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65896.peg.561
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65896.peg.1271
Respiratory_dehydrogenases_1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65896.peg.670
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65896.peg.891
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65896.peg.892
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65896.peg.914
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.857
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65896.peg.1456
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65896.peg.913
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65896.peg.1073
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65896.peg.911
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65896.peg.1362
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65896.peg.1364
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65896.peg.1361
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65896.peg.1364
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65896.peg.1498
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65896.peg.1362
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65896.peg.1498
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65896.peg.1363
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65896.peg.1362
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65896.peg.1364
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65896.peg.1361
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65896.peg.1364
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65896.peg.1362
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65896.peg.561
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65896.peg.1271
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65896.peg.1375
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65896.peg.1363
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65896.peg.1365
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65896.peg.228
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.65896.peg.1383
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.65896.peg.1533
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65896.peg.1534
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65896.peg.1534
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65896.peg.180
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.65896.peg.142
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.65896.peg.143
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65896.peg.178
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65896.peg.177
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.65896.peg.1463
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65896.peg.179
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.65896.peg.947
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.65896.peg.1184
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.65896.peg.975
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.65896.peg.1092
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.65896.peg.1524
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.65896.peg.1527
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.65896.peg.1526
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.65896.peg.1418
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.65896.peg.1417
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.65896.peg.1416
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.65896.peg.418
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65896.peg.106
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65896.peg.240
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65896.peg.34
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.175
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.640
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.893
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.175
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.640
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65896.peg.893
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65896.peg.385
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65896.peg.1582
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65896.peg.6
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65896.peg.49
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65896.peg.414
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65896.peg.782
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65896.peg.414
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65896.peg.998
Sialic_Acid_Metabolism	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein	fig|6666666.65896.peg.667
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.65896.peg.1454
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65896.peg.1582
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65896.peg.1535
Single-Rhodanese-domain_proteins	Glutathione S-transferase domain protein	fig|6666666.65896.peg.253
Sortase	Sortase A, LPXTG specific	fig|6666666.65896.peg.1231
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65896.peg.417
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65896.peg.420
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65896.peg.1018
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65896.peg.749
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65896.peg.1011
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65896.peg.1028
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.65896.peg.17
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.65896.peg.1327
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65896.peg.781
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65896.peg.780
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.399
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.859
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65896.peg.1360
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.65896.peg.1605
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65896.peg.1410
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.65896.peg.871
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.65896.peg.868
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65896.peg.869
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65896.peg.870
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65896.peg.908
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65896.peg.329
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65896.peg.1315
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65896.peg.33
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65896.peg.867
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65896.peg.1049
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65896.peg.329
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.65896.peg.380
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65896.peg.1038
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65896.peg.122
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.65896.peg.1513
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65896.peg.869
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65896.peg.870
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65896.peg.780
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.65896.peg.1619
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65896.peg.285
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.65896.peg.176
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65896.peg.1627
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65896.peg.1625
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.65896.peg.321
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.65896.peg.322
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.65896.peg.324
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.65896.peg.323
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.65896.peg.321
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.65896.peg.322
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.65896.peg.324
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.65896.peg.323
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.65896.peg.949
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.65896.peg.949
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65896.peg.1436
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65896.peg.356
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65896.peg.301
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65896.peg.228
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65896.peg.354
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.65896.peg.1460
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65896.peg.155
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65896.peg.1407
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65896.peg.447
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65896.peg.493
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.65896.peg.725
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65896.peg.724
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65896.peg.680
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65896.peg.616
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.65896.peg.615
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65896.peg.292
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65896.peg.291
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.65896.peg.1148
Threonine_degradation	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.65896.peg.1575
Threonine_degradation	Threonine dehydrogenase and related Zn-dependent dehydrogenases	fig|6666666.65896.peg.938
Threonine_degradation	Threonine dehydrogenase and related Zn-dependent dehydrogenases	fig|6666666.65896.peg.1356
Transcription_factors_bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65896.peg.1506
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.65896.peg.1508
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65896.peg.1537
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.65896.peg.933
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.65896.peg.392
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.65896.peg.289
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.65896.peg.1507
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.65896.peg.1383
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.65896.peg.411
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.65896.peg.1445
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.65896.peg.1454
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65896.peg.665
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65896.peg.1103
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.65896.peg.1176
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.65896.peg.949
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.65896.peg.1384
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.65896.peg.949
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.65896.peg.93
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.65896.peg.1384
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.65896.peg.1526
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.65896.peg.950
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65896.peg.980
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65896.peg.1516
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.65896.peg.288
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.65896.peg.20
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.65896.peg.422
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65896.peg.738
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65896.peg.1368
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65896.peg.417
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65896.peg.420
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65896.peg.287
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.65896.peg.1524
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.65896.peg.17
Trehalose_Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.65896.peg.789
Trehalose_Biosynthesis	Glucoamylase (EC 3.2.1.3)	fig|6666666.65896.peg.456
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.65896.peg.786
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.65896.peg.1514
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.65896.peg.774
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65896.peg.479
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65896.peg.478
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65896.peg.477
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65896.peg.480
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65896.peg.1561
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65896.peg.803
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65896.peg.480
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65896.peg.482
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65896.peg.481
Tryptophan_synthesis	Tryptophan-associated membrane protein	fig|6666666.65896.peg.1562
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.65896.peg.1287
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.65896.peg.333
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.65896.peg.1286
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.65896.peg.1035
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65896.peg.891
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65896.peg.892
Type_VI_secretion_systems	ClpB protein	fig|6666666.65896.peg.709
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65896.peg.49
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65896.peg.414
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65896.peg.414
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65896.peg.998
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65896.peg.879
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65896.peg.831
USS-DB-7	ClpB protein	fig|6666666.65896.peg.709
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.65896.peg.1622
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.65896.peg.1623
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.65896.peg.1624
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65896.peg.1431
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.65896.peg.1319
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.65896.peg.1490
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65896.peg.654
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65896.peg.716
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.65896.peg.227
Urea_decomposition	Urease accessory protein UreD	fig|6666666.65896.peg.693
Urea_decomposition	Urease accessory protein UreE	fig|6666666.65896.peg.690
Urea_decomposition	Urease accessory protein UreF	fig|6666666.65896.peg.691
Urea_decomposition	Urease accessory protein UreG	fig|6666666.65896.peg.692
Urea_decomposition	Urease alpha subunit (EC 3.5.1.5)	fig|6666666.65896.peg.689
Urea_decomposition	Urease beta subunit (EC 3.5.1.5)	fig|6666666.65896.peg.688
Urea_decomposition	Urease gamma subunit (EC 3.5.1.5)	fig|6666666.65896.peg.687
Urease_subunits	Urease accessory protein UreD	fig|6666666.65896.peg.693
Urease_subunits	Urease accessory protein UreE	fig|6666666.65896.peg.690
Urease_subunits	Urease accessory protein UreF	fig|6666666.65896.peg.691
Urease_subunits	Urease accessory protein UreG	fig|6666666.65896.peg.692
Urease_subunits	Urease alpha subunit (EC 3.5.1.5)	fig|6666666.65896.peg.689
Urease_subunits	Urease beta subunit (EC 3.5.1.5)	fig|6666666.65896.peg.688
Urease_subunits	Urease gamma subunit (EC 3.5.1.5)	fig|6666666.65896.peg.687
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65896.peg.1632
Valine_degradation	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65896.peg.1635
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.65896.peg.1081
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.65896.peg.1105
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.65896.peg.436
YjeE	NAD(P)HX dehydratase	fig|6666666.65896.peg.467
YjeE	NAD(P)HX epimerase	fig|6666666.65896.peg.467
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65896.peg.297
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65896.peg.303
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65896.peg.299
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65896.peg.305
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.65896.peg.302
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.65896.peg.300
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65896.peg.128
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65896.peg.129
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65896.peg.1411
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.65896.peg.657
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65896.peg.633
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65896.peg.914
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65896.peg.913
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65896.peg.1073
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.65896.peg.1079
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65896.peg.911
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65896.peg.266
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65896.peg.1324
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65896.peg.71
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65896.peg.881
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65896.peg.1226
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.655
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65896.peg.790
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65896.peg.139
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65896.peg.459
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65896.peg.1362
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65896.peg.1498
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65896.peg.1498
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65896.peg.1363
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65896.peg.1394
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.65896.peg.294
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.65896.peg.1397
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.65896.peg.257
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.65896.peg.254
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.65896.peg.258
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.65896.peg.1397
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65896.peg.783
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65896.peg.236
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.65896.peg.257
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.65896.peg.254
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.65896.peg.258
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.65896.peg.236
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65896.peg.56
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.65896.peg.1405
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.65896.peg.1588
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.65896.peg.472
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.65896.peg.769
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.65896.peg.438
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.65896.peg.201
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.65896.peg.200
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65896.peg.1209
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65896.peg.1426
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.65896.peg.1041
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.65896.peg.188
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.65896.peg.120
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65896.peg.488
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.65896.peg.1435
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65896.peg.500
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65896.peg.166
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65896.peg.987
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65896.peg.1499
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65896.peg.1479
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.65896.peg.596
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65896.peg.94
tRNAs	tRNA-Ala-CGC	fig|6666666.65896.rna.46
tRNAs	tRNA-Ala-GGC	fig|6666666.65896.rna.4
tRNAs	tRNA-Arg-ACG	fig|6666666.65896.rna.25
tRNAs	tRNA-Arg-ACG	fig|6666666.65896.rna.26
tRNAs	tRNA-Arg-CCG	fig|6666666.65896.rna.17
tRNAs	tRNA-Cys-GCA	fig|6666666.65896.rna.52
tRNAs	tRNA-Gly-CCC	fig|6666666.65896.rna.31
tRNAs	tRNA-Gly-GCC	fig|6666666.65896.rna.50
tRNAs	tRNA-Gly-GCC	fig|6666666.65896.rna.53
tRNAs	tRNA-Gly-GCC	fig|6666666.65896.rna.55
tRNAs	tRNA-Leu-CAA	fig|6666666.65896.rna.13
tRNAs	tRNA-Leu-CAG	fig|6666666.65896.rna.22
tRNAs	tRNA-Leu-GAG	fig|6666666.65896.rna.49
tRNAs	tRNA-Phe-GAA	fig|6666666.65896.rna.37
tRNAs	tRNA-Pro-CGG	fig|6666666.65896.rna.29
tRNAs	tRNA-Pro-GGG	fig|6666666.65896.rna.48
tRNAs	tRNA-Ser-CGA	fig|6666666.65896.rna.27
tRNAs	tRNA-Ser-GGA	fig|6666666.65896.rna.28
tRNAs	tRNA-Trp-CCA	fig|6666666.65896.rna.41
tRNAs	tRNA-Val-CAC	fig|6666666.65896.rna.56
tRNAs	tRNA-Val-GAC	fig|6666666.65896.rna.54
trimethylamine_N-oxide_(TMAO)_reductase	Chaperone protein TorD	fig|6666666.65896.peg.150