16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.240
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1658
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1972
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.65898.peg.1975
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.65898.peg.1974
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.65898.peg.2414
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65898.peg.2040
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65898.peg.1979
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65898.peg.2424
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.830
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.2170
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65898.peg.2462
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1122
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1453
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65898.peg.1831
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65898.peg.1468
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65898.peg.1481
5-FCL-like_protein	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.65898.peg.599
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65898.peg.2446
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65898.peg.2447
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65898.peg.2045
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65898.peg.2355
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65898.peg.1118
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65898.peg.594
5-FCL-like_protein	Thiaminase II (EC 3.5.99.2)	fig|6666666.65898.peg.599
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65898.peg.701
ABC_transporter_[iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component	fig|6666666.65898.peg.58
ABC_transporter_[iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component	fig|6666666.65898.peg.976
ABC_transporter_[iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , permease component	fig|6666666.65898.peg.2199
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.65898.peg.1304
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.65898.peg.2098
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65898.peg.2099
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65898.peg.845
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65898.peg.877
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65898.peg.878
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.65898.peg.2100
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.65898.peg.1875
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.65898.peg.2267
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65898.peg.2409
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65898.peg.1091
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.65898.peg.2244
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65898.peg.2243
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65898.peg.2386
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65898.peg.2306
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65898.peg.2103
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65898.peg.1097
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	FIG021574: Possible membrane protein related to de Novo purine biosynthesis	fig|6666666.65898.peg.2448
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65898.peg.2446
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65898.peg.2446
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65898.peg.2447
Acetoin,_butanediol_metabolism	2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)	fig|6666666.65898.peg.1325
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65898.peg.2185
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65898.peg.2184
Acetoin,_butanediol_metabolism	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.65898.peg.2297
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65898.peg.2185
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65898.peg.2184
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1338
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1339
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1340
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1341
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.65898.peg.2212
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.65898.peg.2213
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65898.peg.2473
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.65898.peg.1706
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65898.peg.1330
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65898.peg.941
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65898.peg.1330
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.65898.peg.1151
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65898.peg.2004
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.32
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.2211
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65898.peg.1793
Alanine_biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.65898.peg.645
Alkanesulfonate_assimilation	FMN reductase (EC 1.5.1.29)	fig|6666666.65898.peg.1595
Alkanesulfonates_Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.65898.peg.1595
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.65898.peg.691
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65898.peg.1188
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65898.peg.144
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65898.peg.1025
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65898.peg.1270
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65898.peg.1272
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65898.peg.2278
Alpha-acetolactate_operon	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.65898.peg.2297
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65898.peg.2005
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.65898.peg.2159
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.313
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.2323
Anaerobic_respiratory_reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.65898.peg.1389
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.65898.peg.1061
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1338
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1339
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1340
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1341
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65898.peg.1061
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1061
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1980
Archaeal_lipids	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65898.peg.1000
Archaeal_lipids	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65898.peg.2087
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65898.peg.738
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65898.peg.739
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65898.peg.742
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65898.peg.744
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65898.peg.743
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65898.peg.737
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65898.peg.736
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65898.peg.737
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65898.peg.2306
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65898.peg.741
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65898.peg.738
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65898.peg.739
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65898.peg.742
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65898.peg.744
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65898.peg.743
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65898.peg.737
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65898.peg.736
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65898.peg.737
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65898.peg.2306
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65898.peg.741
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65898.peg.742
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.65898.peg.2374
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65898.peg.741
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65898.peg.2308
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65898.peg.2310
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.313
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.2323
Arsenic_resistance	Arsenical resistance operon repressor	fig|6666666.65898.peg.311
Arsenic_resistance	Arsenical-resistance protein ACR3	fig|6666666.65898.peg.312
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65898.peg.533
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65898.peg.534
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65898.peg.539
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65898.peg.538
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65898.peg.1037
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.84
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1378
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1769
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.2370
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65898.peg.500
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.240
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1658
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1972
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.65898.peg.1620
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.65898.peg.1964
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65898.peg.241
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65898.peg.1967
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.65898.peg.1344
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65898.peg.1963
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.65898.peg.1975
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65898.peg.89
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65898.peg.1345
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.65898.peg.2153
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.555
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.1900
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.65898.peg.2071
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.65898.peg.1443
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.65898.peg.890
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65898.peg.1690
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.65898.peg.1974
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65898.peg.845
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65898.peg.1188
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.84
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1378
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1769
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.2370
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.240
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1658
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1972
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.65898.peg.1620
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.65898.peg.1964
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65898.peg.241
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65898.peg.1967
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65898.peg.1963
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.65898.peg.1975
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.555
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.1900
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65898.peg.554
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.65898.peg.1443
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.65898.peg.890
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65898.peg.555
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65898.peg.1900
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.65898.peg.554
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.65898.peg.1620
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.65898.peg.673
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65898.peg.756
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65898.peg.1761
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.65898.peg.1627
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribonuclease J2 (endoribonuclease in RNA processing)	fig|6666666.65898.peg.1623
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.65898.peg.1146
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.65898.peg.644
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.65898.peg.1145
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.65898.peg.2161
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65898.peg.1690
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.65898.peg.1685
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65898.peg.1740
Beta-Glucoside_Metabolism	Beta-glucoside bgl operon antiterminator, BglG family	fig|6666666.65898.peg.718
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.65898.peg.74
Bilin_Biosynthesis	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65898.peg.2024
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.65898.peg.1570
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65898.peg.1078
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1079
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1529
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65898.peg.1077
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65898.peg.1080
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.65898.peg.1545
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.65898.peg.1546
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65898.peg.2042
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65898.peg.1784
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1338
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1339
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1340
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1341
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65898.peg.1537
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65898.peg.1612
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65898.peg.1895
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.65898.peg.342
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.65898.peg.692
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65898.peg.1432
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65898.peg.1894
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65898.peg.1898
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1105
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1106
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1131
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1275
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.2082
Biotin_biosynthesis	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.65898.peg.1536
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.65898.peg.1939
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65898.peg.1611
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65898.peg.1613
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65898.peg.1537
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65898.peg.1895
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.65898.peg.342
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.65898.peg.692
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65898.peg.1395
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65898.peg.1894
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65898.peg.1898
Biotin_synthesis_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1338
Biotin_synthesis_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1339
Biotin_synthesis_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1340
Biotin_synthesis_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1341
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65898.peg.1537
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65898.peg.1612
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65898.peg.1895
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.65898.peg.342
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.65898.peg.692
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65898.peg.1432
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65898.peg.1395
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65898.peg.1894
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65898.peg.1898
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1105
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1106
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1131
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1275
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.2082
Biotin_synthesis_cluster	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.65898.peg.1536
Biotin_synthesis_cluster	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65898.peg.1611
Biotin_synthesis_cluster	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65898.peg.1613
Biotin_synthesis_cluster	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.65898.peg.1845
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65898.peg.165
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65898.peg.695
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65898.peg.696
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65898.peg.2178
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65898.peg.2185
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65898.peg.2184
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65898.peg.2004
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.65898.peg.2187
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65898.peg.2183
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase biosynthetic (EC 4.3.1.19)	fig|6666666.65898.peg.1948
Branched-Chain_Amino_Acid_Biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.65898.peg.645
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.65898.peg.745
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.65898.peg.1730
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1338
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1339
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1340
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1341
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.830
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.2170
Butanol_Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65898.peg.2473
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65898.peg.1110
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65898.peg.1111
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.65898.peg.2327
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65898.peg.1635
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.65898.peg.1636
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.65898.peg.1637
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65898.peg.1631
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.65898.peg.2138
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.65898.peg.2140
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.65898.peg.2139
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65898.peg.611
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65898.peg.2041
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.65898.peg.2070
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65898.peg.1757
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65898.peg.1717
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.65898.peg.2071
CBSS-176299.4.peg.1292	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65898.peg.81
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65898.peg.1696
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65898.peg.1678
CBSS-1806.1.peg.1285	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.65898.peg.1706
CBSS-1806.1.peg.1285	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65898.peg.1541
CBSS-1806.1.peg.1285	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65898.peg.1617
CBSS-1806.1.peg.1285	FIG000859: hypothetical protein YebC	fig|6666666.65898.peg.1708
CBSS-1806.1.peg.1285	FIG049476: HIT family protein	fig|6666666.65898.peg.1542
CBSS-1806.1.peg.1285	FIG053954: Probable conserved membrane protein	fig|6666666.65898.peg.1538
CBSS-1806.1.peg.1285	Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase)	fig|6666666.65898.peg.1540
CBSS-1806.1.peg.1285	Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57)	fig|6666666.65898.peg.1539
CBSS-1806.1.peg.1285	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	fig|6666666.65898.peg.40
CBSS-1806.1.peg.1285	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.65898.peg.39
CBSS-1806.1.peg.1285	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65898.peg.1543
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.65898.peg.1787
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.65898.peg.1786
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65898.peg.1784
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65898.peg.1792
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.65898.peg.1790
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.65898.peg.1791
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.65898.peg.1789
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65898.peg.1078
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1079
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1529
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65898.peg.1077
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65898.peg.1082
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.65898.peg.1081
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65898.peg.1080
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65898.peg.1902
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65898.peg.1324
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.65898.peg.935
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65898.peg.1395
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.65898.peg.2244
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65898.peg.2243
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.65898.peg.1947
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65898.peg.1680
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1338
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1339
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1340
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1341
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65898.peg.963
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.65898.peg.768
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65898.peg.1722
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65898.peg.900
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.65898.peg.706
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65898.peg.707
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65898.peg.2248
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.65898.peg.706
CBSS-269801.1.peg.1715	Lon-like protease with PDZ domain	fig|6666666.65898.peg.1366
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65898.peg.707
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65898.peg.874
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.65898.peg.1673
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.65898.peg.1889
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65898.peg.1572
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65898.peg.1127
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65898.peg.1180
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65898.peg.1657
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.65898.peg.1670
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.65898.peg.1669
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.65898.peg.1686
CBSS-313593.3.peg.2729	FIG111991: hypothetical protein	fig|6666666.65898.peg.335
CBSS-313593.3.peg.2729	RNA polymerase sigma-70 factor	fig|6666666.65898.peg.336
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65898.peg.1891
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.65898.peg.1899
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.65898.peg.1892
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.313
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.2323
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65898.peg.552
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65898.peg.948
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65898.peg.2025
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65898.peg.83
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65898.peg.1997
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65898.peg.1995
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65898.peg.2042
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65898.peg.1784
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.65898.peg.2115
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65898.peg.1330
CBSS-320388.3.peg.3759	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65898.peg.131
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65898.peg.1330
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65898.peg.2250
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65898.peg.1600
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.65898.peg.1672
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65898.peg.151
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65898.peg.463
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.65898.peg.1778
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65898.peg.1777
CBSS-336982.3.peg.3874	FIG016317: Probable conserved transmembrane protein	fig|6666666.65898.peg.888
CBSS-336982.3.peg.3874	FIG043778: hypothetical protein	fig|6666666.65898.peg.886
CBSS-336982.3.peg.3874	FIG054221: Possible conserved alanine rich membrane protein	fig|6666666.65898.peg.887
CBSS-336982.3.peg.3874	Flp pilus assembly protein, ATPase CpaF	fig|6666666.65898.peg.889
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.139
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.892
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.1093
CBSS-336982.3.peg.3874	Septum site-determining protein MinD	fig|6666666.65898.peg.890
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65898.peg.254
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65898.peg.1941
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65898.peg.1723
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65898.peg.2176
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65898.peg.2177
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65898.peg.1902
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65898.peg.1569
CBSS-349102.4.peg.3442	Sodium - Bile acid symporter	fig|6666666.65898.peg.541
CBSS-349102.4.peg.3442	Transcriptional regulator, LysR family	fig|6666666.65898.peg.2384
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.65898.peg.2056
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.65898.peg.1563
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65898.peg.2182
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65898.peg.1953
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65898.peg.2450
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.65898.peg.2206
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65898.peg.1647
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.32
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.2211
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.65898.peg.1173
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.65898.peg.1399
CBSS-410289.13.peg.3174	Epoxide hydrolase (EC 3.3.2.9)	fig|6666666.65898.peg.894
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.65898.peg.1905
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.65898.peg.1904
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.65898.peg.1903
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.65898.peg.1906
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.65898.peg.1907
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.65898.peg.903
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.65898.peg.902
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.65898.peg.901
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65898.peg.900
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65898.peg.2073
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.65898.peg.2074
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65898.peg.2075
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65898.peg.2075
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65898.peg.1661
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65898.peg.1659
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.240
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1658
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1972
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.65898.peg.1660
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.65898.peg.2069
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.65898.peg.1748
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.32
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.2211
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.497
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.1461
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65898.peg.1600
CBSS-89187.3.peg.2957	Glutathione S-transferase domain protein	fig|6666666.65898.peg.2190
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65898.peg.1762
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65898.peg.756
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65898.peg.1761
CRISPRs	CRISPR-associated helicase Cas3, protein	fig|6666666.65898.peg.228
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.65898.peg.235
CRISPRs	CRISPR-associated protein, Cse1 family	fig|6666666.65898.peg.230
CRISPRs	CRISPR-associated protein, Cse2 family	fig|6666666.65898.peg.231
CRISPRs	CRISPR-associated protein, Cse3 family	fig|6666666.65898.peg.234
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65898.peg.2348
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65898.peg.806
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65898.peg.1775
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65898.peg.2397
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65898.peg.1776
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65898.peg.2157
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65898.peg.1764
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.65898.peg.1783
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65898.peg.1777
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.65898.peg.1872
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65898.peg.1128
Carbon_Starvation	Carbon starvation protein A	fig|6666666.65898.peg.2167
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65898.peg.759
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.65898.peg.1061
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1061
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1980
Carotenoids	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65898.peg.130
Carotenoids	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65898.peg.131
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.84
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1378
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1769
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.2370
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65898.peg.500
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65898.peg.499
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2389
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2392
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65898.peg.1945
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.65898.peg.716
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65898.peg.1680
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.65898.peg.2377
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.65898.peg.1962
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.65898.peg.1964
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65898.peg.1963
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.65898.peg.1961
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.65898.peg.1960
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.65898.peg.1959
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65898.peg.2103
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65898.peg.1965
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65898.peg.453
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65898.peg.1412
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65898.peg.1199
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.65898.peg.1200
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.65898.peg.1264
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65898.peg.1262
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Glycine betaine ABC transport system permease protein	fig|6666666.65898.peg.332
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65898.peg.1263
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65898.peg.2416
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.65898.peg.334
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.65898.peg.211
Choline_uptake_and_conversion_to_betaine_clusters	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.65898.peg.1264
Choline_uptake_and_conversion_to_betaine_clusters	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65898.peg.1262
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65898.peg.1263
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65898.peg.2416
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65898.peg.662
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65898.peg.533
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65898.peg.532
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65898.peg.530
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65898.peg.531
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65898.peg.534
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65898.peg.1924
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.65898.peg.679
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65898.peg.2150
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65898.peg.534
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.65898.peg.1929
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65898.peg.539
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65898.peg.538
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65898.peg.1037
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65898.peg.1984
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65898.peg.1742
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65898.peg.1741
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65898.peg.1386
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65898.peg.191
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65898.peg.2451
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65898.peg.1739
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65898.peg.457
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65898.peg.1737
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.65898.peg.2279
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65898.peg.1740
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.65898.peg.2440
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65898.peg.1837
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.65898.peg.1841
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.65898.peg.1846
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.65898.peg.1842
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65898.peg.1839
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65898.peg.1838
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65898.peg.1840
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.65898.peg.1843
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.65898.peg.1844
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65898.peg.1734
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.65898.peg.1736
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.65898.peg.1735
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65898.peg.1737
Cluster_containing_CofD-like_protein_and_co-occuring_with_DNA_repair	FIG000506: Predicted P-loop-containing kinase	fig|6666666.65898.peg.1771
Cluster_containing_CofD-like_protein_and_co-occuring_with_DNA_repair	FIG001886: Cytoplasmic hypothetical protein	fig|6666666.65898.peg.1773
Cluster_containing_CofD-like_protein_and_co-occuring_with_DNA_repair	FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like	fig|6666666.65898.peg.1772
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.65898.peg.1735
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65898.peg.2076
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.65898.peg.2001
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.65898.peg.1649
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.65898.peg.1852
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.65898.peg.1852
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.65898.peg.1850
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.65898.peg.1851
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.65898.peg.1853
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.65898.peg.1648
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.65898.peg.2039
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.65898.peg.2002
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65898.peg.2182
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.65898.peg.2337
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.65898.peg.537
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.65898.peg.720
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65898.peg.2183
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65898.peg.510
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65898.peg.536
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.65898.peg.2356
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65898.peg.707
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.65898.peg.1758
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.65898.peg.1758
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.65898.peg.537
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65898.peg.510
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65898.peg.536
Coenzyme_F420_hydrogenase	Hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.65898.peg.1417
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65898.peg.1324
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.65898.peg.882
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.65898.peg.2487
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65898.peg.1984
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65898.peg.1742
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65898.peg.1741
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65898.peg.1386
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65898.peg.1739
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65898.peg.1737
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.65898.peg.2279
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65898.peg.1740
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65898.peg.622
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65898.peg.61
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.65898.peg.898
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65898.peg.246
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65898.peg.950
Copper_homeostasis	Copper chaperone	fig|6666666.65898.peg.949
Copper_homeostasis	Copper resistance protein D	fig|6666666.65898.peg.2166
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65898.peg.246
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65898.peg.950
Copper_homeostasis	Multicopper oxidase	fig|6666666.65898.peg.253
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.65898.peg.613
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65898.peg.62
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65898.peg.61
D-Galacturonate_and_D-Glucuronate_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.65898.peg.1190
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65898.peg.2195
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
D-gluconate_and_ketogluconates_metabolism	5-keto-D-gluconate 5-reductase (EC 1.1.1.69)	fig|6666666.65898.peg.178
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65898.peg.1874
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.65898.peg.180
D-gluconate_and_ketogluconates_metabolism	L-idonate 5-dehydrogenase (EC 1.1.1.264)	fig|6666666.65898.peg.179
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.65898.peg.181
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.65898.peg.1442
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65898.peg.2157
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65898.peg.1569
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.65898.peg.2206
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.65898.peg.713
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65898.peg.151
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.65898.peg.898
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65898.peg.969
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65898.peg.1695
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65898.peg.2457
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.65898.peg.702
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65898.peg.570
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65898.peg.566
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.65898.peg.173
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.65898.peg.172
DNA_processing_cluster	Recombination protein RecR	fig|6666666.65898.peg.171
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.65898.peg.727
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.65898.peg.722
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.65898.peg.1770
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65898.peg.611
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.65898.peg.152
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.65898.peg.855
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.65898.peg.1957
DNA_repair,_bacterial	DNA polymerase IV-like protein ImuB	fig|6666666.65898.peg.1499
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.65898.peg.615
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.65898.peg.1905
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65898.peg.758
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65898.peg.1466
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65898.peg.2345
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65898.peg.2346
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65898.peg.2458
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65898.peg.1647
DNA_repair,_bacterial	RecA protein	fig|6666666.65898.peg.1608
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65898.peg.1584
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65898.peg.395
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65898.peg.954
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.65898.peg.67
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.65898.peg.1373
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.65898.peg.1372
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.65898.peg.564
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.65898.peg.2070
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.65898.peg.1608
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.65898.peg.171
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65898.peg.395
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65898.peg.954
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.65898.peg.1608
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65898.peg.1584
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65898.peg.2450
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.65898.peg.1369
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.65898.peg.349
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.65898.peg.1616
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.65898.peg.1608
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.65898.peg.1607
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65898.peg.1677
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.65898.peg.561
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65898.peg.570
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65898.peg.566
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.65898.peg.563
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.65898.peg.564
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.65898.peg.203
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.65898.peg.571
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65898.peg.1945
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.65898.peg.565
DNA_replication_strays	DNA polymerase IV-like protein ImuB	fig|6666666.65898.peg.1499
DNA_replication_strays	Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65898.peg.1490
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.65898.peg.1692
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65898.peg.874
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65898.peg.570
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65898.peg.566
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65898.peg.646
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.65898.peg.658
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65898.peg.2446
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.65898.peg.642
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.65898.peg.1430
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.65898.peg.1429
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.65898.peg.647
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65898.peg.2446
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.65898.peg.659
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.65898.peg.1342
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.65898.peg.1342
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65898.peg.2447
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.65898.peg.771
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65898.peg.2386
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.65898.peg.1750
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.65898.peg.1753
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.65898.peg.1752
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.65898.peg.1751
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.65898.peg.1819
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.65898.peg.809
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65898.peg.1754
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.65898.peg.1749
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65898.peg.1456
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65898.peg.1749
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.65898.peg.1809
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65898.peg.967
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65898.peg.2285
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65898.peg.2005
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65898.peg.2008
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65898.peg.2285
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65898.peg.2045
Denitrification	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.65898.peg.454
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.65898.peg.1220
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.65898.peg.1221
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.65898.peg.1222
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.65898.peg.1223
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribonucleoside regulator DeoR (transcriptional repressor)	fig|6666666.65898.peg.164
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.65898.peg.939
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65898.peg.941
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.65898.peg.1442
Deoxyribose_and_Deoxynucleoside_Catabolism	Thymidine phosphorylase (EC 2.4.2.4)	fig|6666666.65898.peg.603
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.65898.peg.1560
Di-Inositol-Phosphate_biosynthesis	Inositol-1-phosphate synthase (EC 5.5.1.4)	fig|6666666.65898.peg.351
Dihydroxyacetone_kinases	DHA-specific IIA component	fig|6666666.65898.peg.1020
Dihydroxyacetone_kinases	DHA-specific phosphocarrier protein HPr	fig|6666666.65898.peg.1020
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	fig|6666666.65898.peg.1019
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	fig|6666666.65898.peg.1018
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM	fig|6666666.65898.peg.1020
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65898.peg.1089
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65898.peg.1644
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65898.peg.1612
ECF_class_transporters	ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65898.peg.1029
ECF_class_transporters	ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65898.peg.1029
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65898.peg.2334
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65898.peg.1611
ECF_class_transporters	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65898.peg.1027
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65898.peg.2336
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65898.peg.1613
ECF_class_transporters	Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65898.peg.1028
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65898.peg.2333
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65898.peg.1779
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.65898.peg.2371
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.65898.peg.180
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65898.peg.1781
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65898.peg.1775
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.65898.peg.1780
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65898.peg.1776
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65898.peg.1103
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65898.peg.1561
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65898.peg.1922
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.65898.peg.768
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65898.peg.769
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1338
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1339
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1340
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1341
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Ethylmalonyl-CoA epimerase	fig|6666666.65898.peg.2228
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65898.peg.963
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65898.peg.2475
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65898.peg.2475
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.65898.peg.2049
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65898.peg.1449
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65898.peg.1449
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65898.peg.81
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.65898.peg.1276
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1338
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1339
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1340
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1341
Fatty_acid_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65898.peg.2473
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1105
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1106
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1131
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1275
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.2082
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65898.peg.768
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65898.peg.448
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65898.peg.1063
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65898.peg.769
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.65898.peg.768
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.830
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.2170
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65898.peg.448
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65898.peg.1063
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65898.peg.769
Fermentations:_Mixed_acid	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.65898.peg.690
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65898.peg.1110
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65898.peg.1111
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.65898.peg.1112
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.65898.peg.550
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.65898.peg.1563
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.65898.peg.550
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.240
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1658
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1972
Flavohaemoglobin	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.65898.peg.454
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65898.peg.505
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65898.peg.2424
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65898.peg.662
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65898.peg.2462
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.65898.peg.2144
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65898.peg.504
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65898.peg.503
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.65898.peg.2144
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65898.peg.501
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65898.peg.2150
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.65898.peg.2461
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.65898.peg.1625
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65898.peg.505
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65898.peg.500
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65898.peg.504
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65898.peg.503
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.65898.peg.506
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65898.peg.501
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65898.peg.499
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65898.peg.510
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65898.peg.536
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.65898.peg.1489
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.65898.peg.1191
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.65898.peg.1588
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.65898.peg.1589
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.65898.peg.1590
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.65898.peg.1591
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.65898.peg.1592
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.65898.peg.1589
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.65898.peg.1590
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.65898.peg.1591
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.65898.peg.1589
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.65898.peg.1590
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.65898.peg.1591
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65898.peg.1586
Fructose_utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.65898.peg.1593
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.65898.peg.1782
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.65898.peg.1585
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	fig|6666666.65898.peg.64
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.65898.peg.1811
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)	fig|6666666.65898.peg.1810
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.65898.peg.1646
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.65898.peg.1414
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.65898.peg.1425
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.65898.peg.1426
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.65898.peg.1424
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.65898.peg.1423
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.65898.peg.1416
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.65898.peg.1422
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.65898.peg.1421
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	putative periplasmic protein kinase ArgK and related GTPases of G3E family	fig|6666666.65898.peg.1812
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.65898.peg.869
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.65898.peg.1179
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65898.peg.1998
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.65898.peg.511
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65898.peg.1916
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65898.peg.1998
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65898.peg.1324
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.65898.peg.1830
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65898.peg.73
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65898.peg.2013
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65898.peg.2026
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65898.peg.1229
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65898.peg.1956
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65898.peg.1916
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65898.peg.2013
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65898.peg.2026
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65898.peg.132
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65898.peg.1723
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65898.peg.132
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.65898.peg.666
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.65898.peg.1104
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.65898.peg.1822
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.65898.peg.2360
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.65898.peg.2317
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.65898.peg.1655
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65898.peg.1922
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.65898.peg.468
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol uptake facilitator protein	fig|6666666.65898.peg.467
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.65898.peg.466
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.65898.peg.698
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate transporter	fig|6666666.65898.peg.918
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.65898.peg.449
Glycerol_fermentation_to_1,3-propanediol	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	fig|6666666.65898.peg.64
Glycerol_fermentation_to_1,3-propanediol	Glycerol uptake facilitator protein	fig|6666666.65898.peg.467
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.65898.peg.465
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.65898.peg.1986
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.65898.peg.2049
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.830
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65898.peg.2170
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65898.peg.831
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65898.peg.1541
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65898.peg.1617
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65898.peg.759
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Dihydroxyacetone kinase family protein	fig|6666666.65898.peg.703
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.65898.peg.468
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.65898.peg.466
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.65898.peg.698
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.65898.peg.1665
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65898.peg.2355
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65898.peg.2179
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65898.peg.2381
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65898.peg.1230
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65898.peg.1725
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65898.peg.2479
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.139
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.892
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.1093
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65898.peg.2355
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65898.peg.1231
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65898.peg.463
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65898.peg.552
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65898.peg.948
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65898.peg.551
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65898.peg.2218
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65898.peg.2083
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.65898.peg.2295
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65898.peg.1940
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65898.peg.1921
Glycogen_metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.65898.peg.2296
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65898.peg.2040
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65898.peg.2195
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.65898.peg.2371
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65898.peg.2348
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65898.peg.806
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65898.peg.2454
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65898.peg.1775
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65898.peg.2397
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65898.peg.1776
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65898.peg.1103
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65898.peg.1561
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65898.peg.1922
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65898.peg.1777
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65898.peg.2195
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.65898.peg.2371
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65898.peg.2348
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65898.peg.2454
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65898.peg.1776
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65898.peg.1103
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65898.peg.1922
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65898.peg.1777
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.65898.peg.2070
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.65898.peg.2071
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65898.peg.2065
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65898.peg.2073
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.65898.peg.2074
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65898.peg.2075
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.65898.peg.2067
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65898.peg.1801
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65898.peg.2477
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65898.peg.2146
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65898.peg.837
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65898.peg.2077
GroEL_GroES	Chaperone protein DnaK	fig|6666666.65898.peg.839
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65898.peg.484
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65898.peg.1143
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.65898.peg.1144
GroEL_GroES	Heat shock protein GrpE	fig|6666666.65898.peg.838
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.65898.peg.2078
HPr_catabolite_repression_system	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.65898.peg.1593
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65898.peg.837
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65898.peg.2077
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.65898.peg.839
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.65898.peg.838
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.65898.peg.2078
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.65898.peg.836
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.65898.peg.2079
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65898.peg.76
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65898.peg.75
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65898.peg.2076
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65898.peg.1945
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.65898.peg.2122
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.65898.peg.2414
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.65898.peg.1343
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.65898.peg.2213
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.65898.peg.346
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	FIG039061: hypothetical protein related to heme utilization	fig|6666666.65898.peg.535
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, ATPase component HmuV	fig|6666666.65898.peg.1471
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT	fig|6666666.65898.peg.1473
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, permease protein HmuU	fig|6666666.65898.peg.1472
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65898.peg.2024
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme transporter analogous to IsdDEF, ATP-binding protein	fig|6666666.65898.peg.1134
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin, heme-dependent two component system response regulator ChrA	fig|6666666.65898.peg.116
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS	fig|6666666.65898.peg.117
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.65898.peg.436
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.65898.peg.1011
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system, sensory histidine kinase HrrS	fig|6666666.65898.peg.435
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron compound ABC uptake transporter substrate-binding protein PiaA	fig|6666666.65898.peg.1332
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron-dependent repressor IdeR/DtxR	fig|6666666.65898.peg.1571
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.65898.peg.41
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.65898.peg.44
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.65898.peg.925
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.65898.peg.926
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.65898.peg.1803
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65898.peg.1082
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65898.peg.1091
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65898.peg.681
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.65898.peg.1550
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.65898.peg.2079
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.65898.peg.1090
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.65898.peg.1088
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.65898.peg.1083
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.65898.peg.1084
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65898.peg.1089
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65898.peg.1644
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.65898.peg.1089
Heme_biosynthesis_orphans	Radical SAM domain heme biosynthesis protein	fig|6666666.65898.peg.721
Hexose_Phosphate_Uptake_System	Hexose phosphate transport protein UhpT	fig|6666666.65898.peg.433
Hfl_operon	GTP-binding protein HflX	fig|6666666.65898.peg.1597
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65898.peg.1102
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65898.peg.1101
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.65898.peg.668
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.65898.peg.1827
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.65898.peg.1828
Histidine_Biosynthesis	Histidinol dehydrogenase (EC 1.1.1.23)	fig|6666666.65898.peg.1935
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.65898.peg.1349
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.65898.peg.1928
Histidine_Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.65898.peg.1934
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	fig|6666666.65898.peg.1930
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	fig|6666666.65898.peg.1927
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.65898.peg.1933
Histidine_Biosynthesis	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.65898.peg.1926
Histidine_Biosynthesis	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.65898.peg.1826
Histidine_Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.65898.peg.1929
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65898.peg.694
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65898.peg.1556
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65898.peg.76
Hydrogen-sensing_regulatory_system	Hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.65898.peg.1417
Hydrogenases	Ni,Fe-hydrogenase I cytochrome b subunit	fig|6666666.65898.peg.1418
Hydrogenases	Uptake hydrogenase large subunit (EC 1.12.99.6)	fig|6666666.65898.peg.1419
Hydrogenases	Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	fig|6666666.65898.peg.1420
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.65898.peg.643
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.65898.peg.644
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.65898.peg.564
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.65898.peg.203
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.65898.peg.2315
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65898.peg.770
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65898.peg.847
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65898.peg.1949
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65898.peg.874
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65898.peg.2057
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65898.peg.2075
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.65898.peg.479
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.65898.peg.110
Inteins	Translation initiation factor 2	fig|6666666.65898.peg.1637
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.32
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.2211
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65898.peg.1793
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.65898.peg.663
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.65898.peg.661
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65898.peg.1792
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.65898.peg.1790
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.65898.peg.1791
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.65898.peg.1789
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.65898.peg.1795
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.65898.peg.1794
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.65898.peg.1999
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.65898.peg.1061
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65898.peg.1661
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65898.peg.1553
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65898.peg.1659
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65898.peg.621
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65898.peg.620
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65898.peg.2409
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65898.peg.2344
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1338
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1339
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1340
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1341
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65898.peg.1061
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65898.peg.1000
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65898.peg.2087
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.65898.peg.2069
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.65898.peg.1061
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65898.peg.1000
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65898.peg.2087
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.65898.peg.1061
Isoprenoinds_for_Quinones	(2E,6Z)-farnesyl diphosphate synthase (EC 2.5.1.68)	fig|6666666.65898.peg.2358
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65898.peg.1061
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1061
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1980
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.65898.peg.1061
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.65898.peg.2069
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.65898.peg.1683
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.65898.peg.1684
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65898.peg.2254
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65898.peg.2041
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.65898.peg.1261
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.65898.peg.1056
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.65898.peg.1058
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65898.peg.1057
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65898.peg.1055
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.65898.peg.1060
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.65898.peg.1059
Lactate_utilization	L-lactate permease	fig|6666666.65898.peg.573
Lactate_utilization	L-lactate permease	fig|6666666.65898.peg.574
Lactate_utilization	L-lactate permease	fig|6666666.65898.peg.2252
Lactate_utilization	Lactate-responsive regulator LldR in Actinobacteria, GntR family	fig|6666666.65898.peg.572
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.65898.peg.1865
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.65898.peg.1866
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.65898.peg.1867
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.65898.peg.1868
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.65898.peg.2253
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65898.peg.2254
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.65898.peg.2255
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65898.peg.1572
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65898.peg.2030
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65898.peg.2270
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.65898.peg.2271
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65898.peg.1572
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65898.peg.165
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65898.peg.695
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65898.peg.696
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65898.peg.2178
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65898.peg.2004
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65898.peg.2004
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65898.peg.2008
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1122
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1453
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65898.peg.1857
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.65898.peg.1856
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65898.peg.223
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65898.peg.1858
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.65898.peg.1859
Lipid_A_modifications	Sensor protein basS/pmrB (EC 2.7.3.-)	fig|6666666.65898.peg.2430
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.65898.peg.2010
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65898.peg.2009
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.65898.peg.2010
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65898.peg.2009
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65898.peg.1953
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.65898.peg.1923
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.65898.peg.1578
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.65898.peg.1578
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65898.peg.2307
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65898.peg.2309
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65898.peg.933
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.65898.peg.935
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65898.peg.2250
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65898.peg.1600
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65898.peg.1920
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.65898.peg.2314
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65898.peg.2306
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1338
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1339
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1340
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1341
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.65898.peg.2212
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.65898.peg.2213
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65898.peg.2473
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.65898.peg.1753
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.65898.peg.1752
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.65898.peg.2056
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.65898.peg.1563
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.65898.peg.906
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.65898.peg.1145
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65898.peg.2073
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.65898.peg.1872
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.65898.peg.2288
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65898.peg.2083
Maltose_and_Maltodextrin_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.65898.peg.1190
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65898.peg.1921
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.65898.peg.1187
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.65898.peg.1186
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65898.peg.1188
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.65898.peg.1183
Maltose_and_Maltodextrin_Utilization	Pullulanase (EC 3.2.1.41)	fig|6666666.65898.peg.2387
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.65898.peg.1409
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.65898.peg.1403
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65898.peg.1405
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65898.peg.1064
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65898.peg.1064
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.65898.peg.1067
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.65898.peg.1070
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65898.peg.1068
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.65898.peg.1071
Mercuric_reductase	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65898.peg.302
Mercury_resistance_operon	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65898.peg.302
Mercury_resistance_operon	Mercuric resistance operon regulatory protein	fig|6666666.65898.peg.305
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.497
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.1461
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.65898.peg.1570
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65898.peg.1971
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65898.peg.1970
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65898.peg.2241
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65898.peg.1979
Methionine_Biosynthesis	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	fig|6666666.65898.peg.1824
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.65898.peg.1300
Methionine_Biosynthesis	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.65898.peg.1400
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.65898.peg.2093
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65898.peg.62
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.65898.peg.1478
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65898.peg.2249
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65898.peg.2248
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.65898.peg.1494
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.65898.peg.1495
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65898.peg.1492
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65898.peg.1493
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.65898.peg.1469
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.65898.peg.1469
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65898.peg.1330
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65898.peg.1759
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65898.peg.61
Methionine_Degradation	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.65898.peg.1400
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.65898.peg.1494
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.65898.peg.1495
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65898.peg.1492
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65898.peg.1493
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65898.peg.2045
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65898.peg.1330
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65898.peg.1759
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65898.peg.1330
Methionine_Salvage	Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase	fig|6666666.65898.peg.2494
Methionine_Salvage	Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase	fig|6666666.65898.peg.2495
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65898.peg.831
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65898.peg.831
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65898.peg.1723
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65898.peg.1606
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65898.peg.501
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65898.peg.1767
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.65898.peg.1211
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65898.peg.1212
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65898.peg.1216
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65898.peg.1214
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65898.peg.1226
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.65898.peg.1225
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.65898.peg.1225
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65898.peg.1213
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65898.peg.2422
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.65898.peg.1215
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65898.peg.1068
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65898.peg.910
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65898.peg.910
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65898.peg.911
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65898.peg.912
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65898.peg.913
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65898.peg.914
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65898.peg.915
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.497
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.1461
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65898.peg.553
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65898.peg.1046
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65898.peg.1045
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.65898.peg.731
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.65898.peg.730
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.65898.peg.729
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.65898.peg.108
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.65898.peg.107
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.65898.peg.106
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.65898.peg.104
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.65898.peg.445
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.65898.peg.444
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.65898.peg.446
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65898.peg.2195
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65898.peg.1572
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65898.peg.1902
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.65898.peg.445
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.65898.peg.1906
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.65898.peg.128
NAD_and_NADP_cofactor_biosynthesis_global	Niacin transporter NiaP	fig|6666666.65898.peg.951
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65898.peg.86
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65898.peg.68
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.65898.peg.2134
NAD_and_NADP_cofactor_biosynthesis_global	Nudix-related transcriptional regulator NrtR	fig|6666666.65898.peg.447
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.65898.peg.444
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.65898.peg.446
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase	fig|6666666.65898.peg.1351
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1)	fig|6666666.65898.peg.1353
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1)	fig|6666666.65898.peg.1354
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.65898.peg.1414
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.65898.peg.1425
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.65898.peg.1426
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.65898.peg.1424
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.65898.peg.1423
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.65898.peg.1416
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.65898.peg.1422
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.65898.peg.1421
Niacin-Choline_transport_and_metabolism	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.65898.peg.1264
Niacin-Choline_transport_and_metabolism	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65898.peg.1262
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65898.peg.1263
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65898.peg.2416
Niacin-Choline_transport_and_metabolism	Niacin transporter NiaP	fig|6666666.65898.peg.951
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65898.peg.86
Nitrate_and_nitrite_ammonification	Nitrate/nitrite transporter	fig|6666666.65898.peg.1217
Nitrate_and_nitrite_ammonification	Nitrate/nitrite transporter	fig|6666666.65898.peg.1219
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.65898.peg.1220
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.65898.peg.1221
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.65898.peg.1222
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.65898.peg.1223
Nitrosative_stress	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.65898.peg.454
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65898.peg.1661
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65898.peg.1553
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65898.peg.1659
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65898.peg.621
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65898.peg.620
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65898.peg.2409
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65898.peg.2344
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.65898.peg.2373
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65898.peg.1902
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65898.peg.1556
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.65898.peg.896
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.65898.peg.2268
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.65898.peg.1370
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.65898.peg.1371
NusA-TFII_Cluster	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65898.peg.1638
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.65898.peg.1640
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.65898.peg.1636
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.65898.peg.1639
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.65898.peg.1637
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65898.peg.1979
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65898.peg.2424
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65898.peg.1831
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65898.peg.1481
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65898.peg.1481
Osmoregulation	Glycerol uptake facilitator protein	fig|6666666.65898.peg.467
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.65898.peg.922
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.65898.peg.968
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.65898.peg.1578
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.65898.peg.968
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.65898.peg.968
Oxidative_stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.65898.peg.1001
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.65898.peg.442
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.65898.peg.2067
Oxygen_and_light_sensor_PpaA-PpsR	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65898.peg.2024
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65898.peg.1874
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65898.peg.1779
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65898.peg.1781
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65898.peg.2157
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65898.peg.2386
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65898.peg.1764
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.65898.peg.1782
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.65898.peg.1783
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65898.peg.443
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65898.peg.1549
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.240
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1658
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65898.peg.1972
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase A (EC 6.3.2.4)	fig|6666666.65898.peg.699
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.497
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65898.peg.1461
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65898.peg.2385
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65898.peg.73
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65898.peg.2013
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65898.peg.2026
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65898.peg.905
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65898.peg.957
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65898.peg.959
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65898.peg.2385
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.65898.peg.1969
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65898.peg.1107
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65898.peg.65
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.65898.peg.1966
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65898.peg.1965
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65898.peg.1968
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65898.peg.1971
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65898.peg.1970
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase A (EC 6.3.2.4)	fig|6666666.65898.peg.699
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65898.peg.1965
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65898.peg.1968
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65898.peg.1971
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65898.peg.1970
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.65898.peg.549
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.65898.peg.591
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65898.peg.588
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.65898.peg.1660
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1079
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1529
Persister_Cells	Cell division inhibitor	fig|6666666.65898.peg.1748
Phage_DNA_synthesis	DNA adenine methyltransferase, phage-associated	fig|6666666.65898.peg.389
Phage_capsid_proteins	Phage capsid and scaffold	fig|6666666.65898.peg.277
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.65898.peg.276
Phage_replication	DNA helicase, phage-associated	fig|6666666.65898.peg.23
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65898.peg.1949
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.65898.peg.568
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.65898.peg.569
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65898.peg.191
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.65898.peg.30
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65898.peg.2451
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65898.peg.457
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65898.peg.1102
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65898.peg.1101
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65898.peg.1099
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65898.peg.2368
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.65898.peg.496
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65898.peg.1102
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65898.peg.1101
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65898.peg.2075
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65898.peg.2075
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.65898.peg.668
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.65898.peg.846
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65898.peg.1103
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.65898.peg.2132
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.65898.peg.922
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1122
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1453
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65898.peg.2040
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65898.peg.2355
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.555
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.1900
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65898.peg.554
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65898.peg.73
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.65898.peg.1627
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65898.peg.546
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65898.peg.1099
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65898.peg.2368
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65898.peg.1561
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.65898.peg.488
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.65898.peg.1061
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1061
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65898.peg.1980
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.65898.peg.1061
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.65898.peg.2069
Polysaccharide_deacetylases	Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)	fig|6666666.65898.peg.37
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.84
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1378
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1769
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.2370
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.65898.peg.2369
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.65898.peg.2426
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.65898.peg.639
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.65898.peg.2160
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.65898.peg.643
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.65898.peg.643
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.65898.peg.644
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.65898.peg.644
Potassium_homeostasis	putative Glutathione-regulated potassium-efflux system protein KefB	fig|6666666.65898.peg.2109
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.65898.peg.1347
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.65898.peg.2135
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.65898.peg.2136
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65898.peg.1916
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65898.peg.1097
Proline_Synthesis	RNA-binding C-terminal domain PUA	fig|6666666.65898.peg.2136
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65898.peg.769
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65898.peg.1837
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65898.peg.1839
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65898.peg.1838
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65898.peg.1840
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.65898.peg.922
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.65898.peg.1001
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65898.peg.837
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65898.peg.2077
Protein_chaperones	Chaperone protein DnaK	fig|6666666.65898.peg.839
Protein_chaperones	ClpB protein	fig|6666666.65898.peg.814
Protein_chaperones	ClpB protein	fig|6666666.65898.peg.817
Protein_chaperones	Heat shock protein GrpE	fig|6666666.65898.peg.838
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.65898.peg.836
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.65898.peg.1743
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.65898.peg.2085
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.65898.peg.2149
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.65898.peg.69
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65898.peg.2151
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65898.peg.2152
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.65898.peg.607
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.65898.peg.814
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.65898.peg.817
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.65898.peg.615
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.65898.peg.1061
Proteorhodopsin	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65898.peg.130
Proteorhodopsin	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65898.peg.131
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.65898.peg.1250
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.65898.peg.1252
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.65898.peg.1522
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.65898.peg.1896
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.65898.peg.1897
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.65898.peg.2483
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65898.peg.1716
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.65898.peg.1181
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65898.peg.646
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.65898.peg.776
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65898.peg.1511
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.65898.peg.1756
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65898.peg.499
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65898.peg.1139
Purine_conversions	Inosine-5'-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205)	fig|6666666.65898.peg.1138
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65898.peg.1026
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65898.peg.1629
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65898.peg.2112
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.65898.peg.2142
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65898.peg.941
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.65898.peg.772
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 2	fig|6666666.65898.peg.2060
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65898.peg.2345
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65898.peg.2346
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65898.peg.1139
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205)	fig|6666666.65898.peg.1138
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65898.peg.443
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.65898.peg.1250
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.65898.peg.1252
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.65898.peg.1522
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65898.peg.1553
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65898.peg.2179
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65898.peg.2381
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65898.peg.1775
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65898.peg.2479
Pyridoxin_(Vitamin_B6)_Biosynthesis	Predicted transcriptional regulator of pyridoxine metabolism	fig|6666666.65898.peg.38
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.65898.peg.2072
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	fig|6666666.65898.peg.40
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.65898.peg.39
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.65898.peg.1151
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65898.peg.2004
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65898.peg.1230
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65898.peg.1725
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65898.peg.1231
Pyruvate_Alanine_Serine_Interconversions	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.65898.peg.645
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3)	fig|6666666.65898.peg.677
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.65898.peg.1289
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.65898.peg.690
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.65898.peg.1452
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65898.peg.1922
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65898.peg.768
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.65898.peg.1693
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65898.peg.831
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65898.peg.769
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65898.peg.2045
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.65898.peg.632
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65898.peg.501
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65898.peg.1026
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65898.peg.1629
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65898.peg.2112
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65898.peg.588
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.65898.peg.825
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.65898.peg.1516
Queuosine-Archaeosine_Biosynthesis	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65898.peg.1027
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.65898.peg.182
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.65898.peg.183
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65898.peg.1742
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65898.peg.31
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65898.peg.2124
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.65898.peg.479
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.65898.peg.706
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.65898.peg.1554
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.65898.peg.623
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.65898.peg.2299
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.65898.peg.1663
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65898.peg.2076
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.65898.peg.2410
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65898.peg.556
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.65898.peg.1682
RNA_methylation	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.65898.peg.1845
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.65898.peg.1288
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.65898.peg.2209
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.555
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65898.peg.1900
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65898.peg.554
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65898.peg.556
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.65898.peg.1172
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65898.peg.1046
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65898.peg.1045
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65898.peg.1757
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.65898.peg.2033
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.65898.peg.2172
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65898.peg.1635
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.65898.peg.2141
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65898.peg.1696
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65898.peg.2313
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65898.peg.1891
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.65898.peg.1952
RNA_pseudouridine_syntheses	Similar to ribosomal large subunit pseudouridine synthase D, type RluD4	fig|6666666.65898.peg.426
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65898.peg.1170
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65898.peg.1631
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.65898.peg.2259
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.65898.peg.2260
RecA_and_RecX	RecA protein	fig|6666666.65898.peg.1608
RecA_and_RecX	Regulatory protein RecX	fig|6666666.65898.peg.1607
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65898.peg.553
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.65898.peg.1296
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65898.peg.570
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65898.peg.566
Respiratory_dehydrogenases_1	Glycerol dehydrogenase (EC 1.1.1.6)	fig|6666666.65898.peg.59
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.65898.peg.466
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65898.peg.355
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65898.peg.1870
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.65898.peg.978
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65898.peg.982
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65898.peg.983
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65898.peg.986
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65898.peg.980
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65898.peg.984
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.65898.peg.981
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.65898.peg.985
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.65898.peg.53
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.65898.peg.54
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65898.peg.1129
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65898.peg.1572
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65898.peg.1128
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65898.peg.1128
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65898.peg.1127
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65898.peg.1767
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65898.peg.1765
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65898.peg.1768
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65898.peg.1765
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65898.peg.1630
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65898.peg.1767
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65898.peg.1630
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65898.peg.1766
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin transporter PnuX	fig|6666666.65898.peg.2402
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65898.peg.1767
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65898.peg.1765
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65898.peg.1768
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65898.peg.1765
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.65898.peg.1708
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65898.peg.1630
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65898.peg.1767
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65898.peg.1630
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65898.peg.1766
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin transporter PnuX	fig|6666666.65898.peg.2402
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65898.peg.1631
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65898.peg.1767
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65898.peg.1765
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65898.peg.1768
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.65898.peg.1827
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.65898.peg.1828
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65898.peg.1765
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65898.peg.1767
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65898.peg.355
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65898.peg.1870
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65898.peg.1754
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.65898.peg.1826
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65898.peg.1766
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65898.peg.1764
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65898.peg.701
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.65898.peg.1745
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.65898.peg.1676
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65898.peg.1677
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65898.peg.1677
Ribonucleases_in_Bacillus	Ribonuclease J2 (endoribonuclease in RNA processing)	fig|6666666.65898.peg.1623
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65898.peg.132
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.65898.peg.111
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.65898.peg.110
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65898.peg.134
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65898.peg.137
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65898.peg.652
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.65898.peg.1582
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65898.peg.133
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65898.peg.653
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.65898.peg.108
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.65898.peg.2421
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.65898.peg.1195
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.65898.peg.102
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.65898.peg.1174
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.65898.peg.108
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.65898.peg.1175
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.65898.peg.2436
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.65898.peg.2436
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.65898.peg.1628
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.65898.peg.1684
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.65898.peg.92
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.65898.peg.2437
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.65898.peg.2437
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.65898.peg.97
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.65898.peg.716
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.65898.peg.2125
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.65898.peg.1670
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.65898.peg.95
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.65898.peg.1173
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.65898.peg.1195
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.65898.peg.955
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.65898.peg.107
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.65898.peg.1198
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.65898.peg.1158
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.65898.peg.1394
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.65898.peg.1683
Ribosome_biogenesis_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.65898.peg.2141
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65898.peg.2313
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.65898.peg.1952
Ribosome_biogenesis_bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.65898.peg.1146
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.65898.peg.2421
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.65898.peg.2410
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.65898.peg.1682
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.65898.peg.1667
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.65898.peg.1670
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.65898.peg.1669
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.65898.peg.1709
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.65898.peg.1708
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.65898.peg.1710
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.65898.peg.1711
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.65898.peg.1645
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.65898.peg.890
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1338
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1339
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1340
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1341
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65898.peg.1979
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65898.peg.2424
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1338
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1339
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1340
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65898.peg.1341
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65898.peg.1801
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65898.peg.2477
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.65898.peg.2371
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65898.peg.1831
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65898.peg.1917
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65898.peg.2146
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65898.peg.1481
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65898.peg.1481
Serine-glyoxylate_cycle	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.65898.peg.1811
Serine-glyoxylate_cycle	Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)	fig|6666666.65898.peg.1810
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65898.peg.1277
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65898.peg.1434
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65898.peg.1436
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65898.peg.2355
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65898.peg.1119
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65898.peg.1118
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65898.peg.2179
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65898.peg.2381
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65898.peg.2479
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.139
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.892
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.1093
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.139
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.892
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65898.peg.1093
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65898.peg.2355
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65898.peg.1953
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65898.peg.877
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65898.peg.878
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65898.peg.2057
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65898.peg.2385
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65898.peg.1199
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65898.peg.2385
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.65898.peg.1200
Sialic_Acid_Metabolism	N-acetylmannosamine kinase (EC 2.7.1.60)	fig|6666666.65898.peg.1202
Sialic_Acid_Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.65898.peg.1201
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65898.peg.1156
Sialic_Acid_Metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.65898.peg.869
Sialic_Acid_Metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.65898.peg.1179
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.65898.peg.1570
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65898.peg.1953
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65898.peg.1678
Single-Rhodanese-domain_proteins	Glutathione S-transferase domain protein	fig|6666666.65898.peg.2190
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.65898.peg.966
Sortase	Sortase A, LPXTG specific	fig|6666666.65898.peg.41
Sortase	Sortase A, LPXTG specific	fig|6666666.65898.peg.44
Sortase	Sortase A, LPXTG specific	fig|6666666.65898.peg.925
Sortase	Sortase A, LPXTG specific	fig|6666666.65898.peg.926
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2389
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2392
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65898.peg.1511
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65898.peg.484
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65898.peg.1143
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65898.peg.1492
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65898.peg.1493
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.65898.peg.2437
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.65898.peg.1343
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.65898.peg.1790
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65898.peg.621
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65898.peg.620
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.84
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1378
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.1769
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65898.peg.2370
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65898.peg.1717
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.65898.peg.1117
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.65898.peg.1120
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65898.peg.1119
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65898.peg.1118
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1079
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65898.peg.1529
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65898.peg.2285
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65898.peg.1801
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65898.peg.2477
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1122
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65898.peg.1453
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65898.peg.2285
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.65898.peg.2349
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65898.peg.1468
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65898.peg.2146
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.65898.peg.1652
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65898.peg.1119
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65898.peg.1118
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65898.peg.620
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.65898.peg.1988
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65898.peg.2241
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.65898.peg.138
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65898.peg.1997
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65898.peg.1995
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.65898.peg.674
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.65898.peg.673
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.65898.peg.671
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.65898.peg.672
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.65898.peg.674
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.65898.peg.673
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.65898.peg.671
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.65898.peg.672
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.65898.peg.106
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.65898.peg.106
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65898.peg.1553
Thiamin_biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.65898.peg.595
Thiamin_biosynthesis	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.65898.peg.599
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65898.peg.2336
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.65898.peg.596
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65898.peg.598
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65898.peg.1228
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.65898.peg.593
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65898.peg.594
Thiamin_biosynthesis	Thiaminase II (EC 3.5.99.2)	fig|6666666.65898.peg.599
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65898.peg.701
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.65898.peg.597
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65898.peg.2333
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.65898.peg.1577
Thioredoxin-disulfide_reductase	Alkylhydroperoxidase protein D	fig|6666666.65898.peg.1576
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.65898.peg.1578
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65898.peg.83
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65898.peg.1722
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65898.peg.551
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.65898.peg.768
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65898.peg.769
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65898.peg.1231
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65898.peg.1324
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65898.peg.933
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.65898.peg.935
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65898.peg.2249
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65898.peg.2248
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.65898.peg.2021
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.65898.peg.1832
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.65898.peg.1240
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.65898.peg.202
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.65898.peg.1241
Transcription_factors_bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65898.peg.1638
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.65898.peg.1640
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65898.peg.1680
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.65898.peg.1059
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.65898.peg.2362
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.65898.peg.2245
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.65898.peg.1639
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.65898.peg.1745
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.65898.peg.2377
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.65898.peg.1563
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.65898.peg.1570
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.65898.peg.550
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65898.peg.336
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.65898.peg.2429
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.313
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65898.peg.2323
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65898.peg.2385
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.65898.peg.2388
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65898.peg.2385
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2389
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2392
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65898.peg.2386
Transcription_repair_cluster	Short-chain dehydrogenase/reductase SDR	fig|6666666.65898.peg.2171
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.65898.peg.2377
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.65898.peg.106
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.65898.peg.1744
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.65898.peg.106
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.65898.peg.2122
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.65898.peg.1744
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.65898.peg.1669
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.65898.peg.104
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65898.peg.1762
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.65898.peg.1636
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.65898.peg.1176
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.65898.peg.1637
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.65898.peg.729
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65898.peg.1180
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65898.peg.1657
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.65898.peg.2244
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.65898.peg.1347
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.65898.peg.2394
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65898.peg.756
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65898.peg.1761
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2389
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65898.peg.2392
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65898.peg.2243
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.65898.peg.1667
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.65898.peg.1343
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.65898.peg.1947
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.65898.peg.643
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65898.peg.2218
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65898.peg.1940
Trehalose_Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.65898.peg.2217
Trehalose_Biosynthesis	Trehalose synthase (EC 5.4.99.16)	fig|6666666.65898.peg.1189
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.65898.peg.625
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.65898.peg.604
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.65898.peg.1654
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.65898.peg.604
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.65898.peg.489
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.65898.peg.490
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65898.peg.662
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65898.peg.533
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65898.peg.532
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65898.peg.530
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65898.peg.531
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65898.peg.534
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65898.peg.1924
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65898.peg.2150
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65898.peg.534
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65898.peg.539
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65898.peg.538
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65898.peg.1037
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.65898.peg.1843
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.65898.peg.2291
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.65898.peg.1844
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.65898.peg.2167
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65898.peg.982
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65898.peg.983
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65898.peg.986
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65898.peg.980
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65898.peg.984
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.65898.peg.981
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.65898.peg.985
Type_VI_secretion_systems	ClpB protein	fig|6666666.65898.peg.814
Type_VI_secretion_systems	ClpB protein	fig|6666666.65898.peg.817
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65898.peg.2057
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65898.peg.2385
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65898.peg.2385
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65898.peg.1156
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65898.peg.1107
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65898.peg.65
USS-DB-7	ClpB protein	fig|6666666.65898.peg.814
USS-DB-7	ClpB protein	fig|6666666.65898.peg.817
Ubiquinone_Biosynthesis_in_Eucarya	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.65898.peg.1067
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.65898.peg.1992
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.65898.peg.1993
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.65898.peg.1994
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.65898.peg.2339
Universal_GTPases	GTP-binding protein EngA	fig|6666666.65898.peg.1889
Universal_GTPases	GTP-binding protein Era	fig|6666666.65898.peg.2071
Universal_GTPases	GTP-binding protein HflX	fig|6666666.65898.peg.1597
Universal_GTPases	GTP-binding protein Obg	fig|6666666.65898.peg.2138
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.65898.peg.2319
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.65898.peg.1387
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65898.peg.1690
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.65898.peg.1685
Universal_GTPases	Translation elongation factor G	fig|6666666.65898.peg.106
Universal_GTPases	Translation elongation factor LepA	fig|6666666.65898.peg.2122
Universal_GTPases	Translation elongation factor Tu	fig|6666666.65898.peg.104
Universal_GTPases	Translation initiation factor 2	fig|6666666.65898.peg.1637
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65898.peg.1549
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.65898.peg.1798
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.65898.peg.1620
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65898.peg.967
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65898.peg.2458
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.65898.peg.702
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.65898.peg.1408
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.65898.peg.1380
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.65898.peg.904
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.65898.peg.2412
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.65898.peg.1145
YjeE	NAD(P)HX dehydratase	fig|6666666.65898.peg.970
YjeE	NAD(P)HX epimerase	fig|6666666.65898.peg.970
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.65898.peg.613
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65898.peg.622
Zinc_regulated_enzymes	Dihydroorotase (EC 3.5.2.3)	fig|6666666.65898.peg.1751
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65898.peg.501
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65898.peg.553
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.65898.peg.1926
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.65898.peg.1088
Zinc_regulated_enzymes	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.65898.peg.1646
Zinc_regulated_enzymes	Zinc uptake regulation protein ZUR	fig|6666666.65898.peg.2067
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65898.peg.1212
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65898.peg.1216
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65898.peg.1214
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65898.peg.1226
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.65898.peg.1215
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65898.peg.2151
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65898.peg.2152
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65898.peg.1716
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.65898.peg.867
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.65898.peg.1302
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65898.peg.2176
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65898.peg.2177
cAMP_signaling_in_bacteria	Prophage Clp protease-like protein	fig|6666666.65898.peg.381
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65898.peg.900
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 2	fig|6666666.65898.peg.2060
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65898.peg.1129
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65898.peg.1128
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65898.peg.1128
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.65898.peg.1410
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65898.peg.1127
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.32
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65898.peg.2211
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65898.peg.1793
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1338
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1339
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1340
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65898.peg.1341
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65898.peg.2473
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1105
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1106
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1131
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.1275
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65898.peg.2082
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65898.peg.874
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65898.peg.395
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65898.peg.954
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65898.peg.1767
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65898.peg.1630
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65898.peg.1630
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65898.peg.1766
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65898.peg.1734
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.65898.peg.2251
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.65898.peg.1731
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.65898.peg.2203
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.65898.peg.2194
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.65898.peg.2204
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.65898.peg.1731
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65898.peg.622
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65898.peg.681
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.65898.peg.2203
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.65898.peg.2194
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.65898.peg.2204
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.65898.peg.681
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65898.peg.2065
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.65898.peg.1724
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.65898.peg.1958
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.65898.peg.1003
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.65898.peg.1004
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.65898.peg.526
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein	fig|6666666.65898.peg.1322
tRNA_aminoacylation,_Lys	Putative membrane protein found fused to lysyl-tRNA synthetase like protein	fig|6666666.65898.peg.1322
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.65898.peg.2413
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.65898.peg.734
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.65898.peg.735
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.65898.peg.1384
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.65898.peg.1642
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65898.peg.463
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65898.peg.1543
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.65898.peg.1463
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.65898.peg.746
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.65898.peg.2145
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65898.peg.546
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.65898.peg.1552
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65898.peg.558
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65898.peg.75
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.65898.peg.1601
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65898.peg.1170
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65898.peg.1631
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65898.peg.1606
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.65898.peg.189
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65898.peg.2124
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.65898.peg.479
tRNAs	tRNA-Ala-GGC	fig|6666666.65898.rna.12
tRNAs	tRNA-Arg-ACG	fig|6666666.65898.rna.4
tRNAs	tRNA-Arg-CCG	fig|6666666.65898.rna.53
tRNAs	tRNA-Cys-GCA	fig|6666666.65898.rna.40
tRNAs	tRNA-Gly-CCC	fig|6666666.65898.rna.34
tRNAs	tRNA-Gly-GCC	fig|6666666.65898.rna.37
tRNAs	tRNA-Gly-GCC	fig|6666666.65898.rna.39
tRNAs	tRNA-Gly-GCC	fig|6666666.65898.rna.42
tRNAs	tRNA-Leu-CAA	fig|6666666.65898.rna.27
tRNAs	tRNA-Leu-CAG	fig|6666666.65898.rna.15
tRNAs	tRNA-Leu-GAG	fig|6666666.65898.rna.43
tRNAs	tRNA-Phe-GAA	fig|6666666.65898.rna.10
tRNAs	tRNA-Pro-CGG	fig|6666666.65898.rna.29
tRNAs	tRNA-Pro-GGG	fig|6666666.65898.rna.44
tRNAs	tRNA-Ser-CGA	fig|6666666.65898.rna.14
tRNAs	tRNA-Trp-CCA	fig|6666666.65898.rna.30
tRNAs	tRNA-Val-CAC	fig|6666666.65898.rna.36
tRNAs	tRNA-Val-GAC	fig|6666666.65898.rna.38
tRNAs	tRNA-Val-GAC	fig|6666666.65898.rna.41