16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.646
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2307
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2434
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.65899.peg.2304
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.65899.peg.2305
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.65899.peg.1182
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65899.peg.2230
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65899.peg.654
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65899.peg.1193
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.55
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.213
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.1983
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65899.peg.1233
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1547
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1790
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65899.peg.1323
5-FCL-like_protein	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.65899.peg.1802
5-FCL-like_protein	Hydroxyethylthiazole kinase (EC 2.7.1.50)	fig|6666666.65899.peg.321
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65899.peg.1563
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65899.peg.1571
5-FCL-like_protein	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.65899.peg.323
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65899.peg.1212
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65899.peg.1213
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65899.peg.2225
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65899.peg.1094
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65899.peg.1785
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65899.peg.322
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65899.peg.582
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.65899.peg.591
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.65899.peg.592
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.65899.peg.590
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.65899.peg.1526
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.65899.peg.2147
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65899.peg.1527
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65899.peg.2045
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65899.peg.2146
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65899.peg.1529
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65899.peg.2148
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.65899.peg.1286
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.65899.peg.842
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65899.peg.1171
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65899.peg.1755
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.65899.peg.801
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65899.peg.800
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65899.peg.1132
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65899.peg.875
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65899.peg.2318
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65899.peg.1761
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	FIG021574: Possible membrane protein related to de Novo purine biosynthesis	fig|6666666.65899.peg.1214
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65899.peg.1212
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65899.peg.1212
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65899.peg.1213
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65899.peg.489
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65899.peg.488
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65899.peg.489
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65899.peg.488
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.944
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1120
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1134
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65899.peg.944
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.65899.peg.1120
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.65899.peg.776
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.65899.peg.777
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1388
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1944
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.65899.peg.1450
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65899.peg.1029
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65899.peg.1029
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.65899.peg.1605
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65899.peg.2269
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.169
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.775
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65899.peg.1357
Alanine_biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.65899.peg.349
Alkanesulfonates_Utilization	Alkanesulfonate monooxygenase (EC 1.14.14.5)	fig|6666666.65899.peg.680
Alkanesulfonates_Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.65899.peg.1430
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.65899.peg.1731
Alkylphosphonate_utilization	Metal-dependent hydrolase involved in phosphonate metabolism	fig|6666666.65899.peg.595
Alkylphosphonate_utilization	Metal-dependent hydrolase involved in phosphonate metabolism	fig|6666666.65899.peg.596
Alkylphosphonate_utilization	PhnB protein	fig|6666666.65899.peg.422
Alkylphosphonate_utilization	PhnB protein	fig|6666666.65899.peg.1294
Alkylphosphonate_utilization	PhnH protein	fig|6666666.65899.peg.462
Alkylphosphonate_utilization	PhnI protein	fig|6666666.65899.peg.461
Alkylphosphonate_utilization	PhnJ protein	fig|6666666.65899.peg.460
Alkylphosphonate_utilization	Phosphonates transport ATP-binding protein PhnK	fig|6666666.65899.peg.598
Alkylphosphonate_utilization	Phosphonates transport ATP-binding protein PhnL	fig|6666666.65899.peg.597
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65899.peg.975
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65899.peg.852
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65899.peg.968
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.65899.peg.969
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65899.peg.2268
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.65899.peg.2055
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.65899.peg.2410
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65899.peg.279
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65899.peg.538
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65899.peg.537
Arginine_Biosynthesis_--_gjo	Acetylornithine deacetylase (EC 3.5.1.16)	fig|6666666.65899.peg.1059
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65899.peg.535
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65899.peg.533
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65899.peg.534
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65899.peg.539
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65899.peg.540
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65899.peg.506
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65899.peg.539
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65899.peg.875
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65899.peg.536
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65899.peg.538
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65899.peg.537
Arginine_Biosynthesis_extended	Acetylornithine deacetylase (EC 3.5.1.16)	fig|6666666.65899.peg.1059
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65899.peg.535
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65899.peg.533
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65899.peg.534
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65899.peg.539
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65899.peg.540
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65899.peg.506
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65899.peg.539
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65899.peg.875
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65899.peg.536
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65899.peg.535
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65899.peg.536
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65899.peg.535
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65899.peg.2380
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65899.peg.536
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65899.peg.877
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65899.peg.279
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.65899.peg.2199
Arsenic_resistance	Arsenical resistance operon repressor	fig|6666666.65899.peg.277
Arsenic_resistance	Arsenical-resistance protein ACR3	fig|6666666.65899.peg.278
Arsenic_resistance	Arsenical-resistance protein ACR3	fig|6666666.65899.peg.1102
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65899.peg.714
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65899.peg.713
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65899.peg.711
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65899.peg.712
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1382
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1487
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1800
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.2020
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65899.peg.225
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.646
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2307
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2434
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.65899.peg.2473
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65899.peg.645
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65899.peg.2312
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.65899.peg.130
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65899.peg.2316
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.65899.peg.2304
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65899.peg.131
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.65899.peg.2061
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.694
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.1264
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.65899.peg.2173
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.65899.peg.1533
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65899.peg.2396
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.65899.peg.2305
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65899.peg.1529
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65899.peg.2148
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65899.peg.975
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1382
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1487
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1800
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.2020
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.646
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2307
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2434
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.65899.peg.2473
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65899.peg.645
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65899.peg.2312
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65899.peg.2316
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.65899.peg.2304
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.694
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.1264
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65899.peg.695
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.65899.peg.1533
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65899.peg.694
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65899.peg.1264
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.65899.peg.695
Bacterial_hemoglobins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65899.peg.234
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.65899.peg.2051
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65899.peg.2396
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.65899.peg.2399
Benzoate_degradation	benzoate MFS transporter BenK	fig|6666666.65899.peg.2070
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65899.peg.1413
Beta-Glucoside_Metabolism	Beta-glucosidase (EC 3.2.1.21)	fig|6666666.65899.peg.1612
Beta-lactamase	Beta-lactamase (EC 3.5.2.6)	fig|6666666.65899.peg.766
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.65899.peg.2212
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.65899.peg.2010
Bilin_Biosynthesis	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65899.peg.915
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.65899.peg.2516
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65899.peg.1741
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1742
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1819
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65899.peg.1740
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65899.peg.1743
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65899.peg.1818
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.65899.peg.71
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65899.peg.2228
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65899.peg.1367
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.992
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.1119
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.2392
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65899.peg.2481
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65899.peg.743
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.65899.peg.615
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65899.peg.1524
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.978
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1133
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1769
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1808
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.2161
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.65899.peg.2353
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65899.peg.2482
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65899.peg.2480
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65899.peg.743
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.65899.peg.615
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65899.peg.1500
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65899.peg.1923
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65899.peg.588
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65899.peg.587
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65899.peg.479
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65899.peg.489
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65899.peg.488
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65899.peg.2269
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.65899.peg.493
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.65899.peg.1969
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65899.peg.487
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase biosynthetic (EC 4.3.1.19)	fig|6666666.65899.peg.2343
Branched-Chain_Amino_Acid_Biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.65899.peg.349
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.65899.peg.1278
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.65899.peg.1423
Butanol_Biosynthesis	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65899.peg.944
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.55
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.213
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.1983
Butanol_Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1388
Butanol_Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1944
Butyrate_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.944
Butyrate_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1120
Butyrate_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1134
Butyrate_metabolism_cluster	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Butyrate_metabolism_cluster	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Butyrate_metabolism_cluster	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Butyrate_metabolism_cluster	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Butyrate_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1388
Butyrate_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1944
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.65899.peg.2233
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.65899.peg.2231
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.65899.peg.2232
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.65899.peg.4
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.65899.peg.1216
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.65899.peg.1540
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65899.peg.2455
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.65899.peg.2454
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.65899.peg.2452
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65899.peg.2459
CBSS-160492.1.peg.550	Predicted endonuclease distantly related to archaeal Holliday junction resolvase	fig|6666666.65899.peg.2416
CBSS-160492.1.peg.550	rRNA small subunit methyltransferase I	fig|6666666.65899.peg.1182
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.65899.peg.2109
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.65899.peg.2110
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65899.peg.249
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65899.peg.2209
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65899.peg.2229
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65899.peg.391
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65899.peg.1173
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.65899.peg.2174
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65899.peg.1395
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65899.peg.1440
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.65899.peg.2173
CBSS-176299.4.peg.1292	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65899.peg.2018
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65899.peg.2383
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65899.peg.2413
CBSS-1806.1.peg.1285	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.65899.peg.1450
CBSS-1806.1.peg.1285	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65899.peg.1455
CBSS-1806.1.peg.1285	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65899.peg.2476
CBSS-1806.1.peg.1285	FIG000859: hypothetical protein YebC	fig|6666666.65899.peg.1449
CBSS-1806.1.peg.1285	FIG049476: HIT family protein	fig|6666666.65899.peg.1456
CBSS-1806.1.peg.1285	FIG053954: Probable conserved membrane protein	fig|6666666.65899.peg.1452
CBSS-1806.1.peg.1285	Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase)	fig|6666666.65899.peg.1454
CBSS-1806.1.peg.1285	Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57)	fig|6666666.65899.peg.1453
CBSS-1806.1.peg.1285	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.65899.peg.2067
CBSS-1806.1.peg.1285	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65899.peg.1457
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.65899.peg.1363
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.65899.peg.1364
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65899.peg.1367
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65899.peg.1358
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.65899.peg.1360
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.65899.peg.1359
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.65899.peg.1361
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65899.peg.1741
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1742
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1819
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65899.peg.1740
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65899.peg.1745
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65899.peg.1743
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65899.peg.1818
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.83
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.603
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65899.peg.1012
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.65899.peg.1921
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65899.peg.1500
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.65899.peg.801
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65899.peg.800
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.65899.peg.2345
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65899.peg.2409
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.992
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.1119
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.2392
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65899.peg.423
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65899.peg.609
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65899.peg.2391
CBSS-246196.1.peg.364	Acyl dehydratase	fig|6666666.65899.peg.2390
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.65899.peg.284
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65899.peg.1435
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.65899.peg.577
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65899.peg.576
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65899.peg.819
CBSS-269482.1.peg.1294	Organic hydroperoxide resistance protein	fig|6666666.65899.peg.1968
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.65899.peg.577
CBSS-269801.1.peg.1715	Lon-like protease with PDZ domain	fig|6666666.65899.peg.1474
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65899.peg.576
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65899.peg.1881
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.65899.peg.99
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.65899.peg.2418
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65899.peg.1152
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65899.peg.1152
CBSS-279010.5.peg.587	Lactam utilization protein LamB	fig|6666666.65899.peg.1151
CBSS-279010.5.peg.587	hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	fig|6666666.65899.peg.457
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.65899.peg.1269
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.1801
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.2514
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65899.peg.1796
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65899.peg.1636
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65899.peg.2436
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.65899.peg.2421
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.65899.peg.2422
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65899.peg.1267
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.65899.peg.1265
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.65899.peg.1266
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65899.peg.279
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.65899.peg.2262
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65899.peg.698
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65899.peg.760
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65899.peg.2241
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65899.peg.2019
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65899.peg.2282
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65899.peg.2284
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65899.peg.2228
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65899.peg.1367
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.65899.peg.74
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.65899.peg.173
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65899.peg.1029
CBSS-320388.3.peg.3759	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65899.peg.664
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65899.peg.1029
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65899.peg.1187
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65899.peg.955
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.65899.peg.1374
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65899.peg.1375
CBSS-336982.3.peg.1011	FIG019045: long form Mg-chelase associated protein with vWA domain	fig|6666666.65899.peg.413
CBSS-336982.3.peg.1011	Magnesium chelatase, subunit ChlI (EC 6.6.1.1)	fig|6666666.65899.peg.414
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65899.peg.2351
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65899.peg.1434
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65899.peg.477
CBSS-342610.3.peg.1794	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.65899.peg.91
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.83
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.603
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65899.peg.2517
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65899.peg.2209
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.65899.peg.2188
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.65899.peg.2231
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.65899.peg.2524
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65899.peg.486
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65899.peg.2335
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65899.peg.1220
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.65899.peg.525
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65899.peg.1186
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.169
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.775
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.65899.peg.1631
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.65899.peg.1504
CBSS-410289.13.peg.3174	Epoxide hydrolase (EC 3.3.2.9)	fig|6666666.65899.peg.1895
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.65899.peg.80
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.65899.peg.81
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.65899.peg.82
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.65899.peg.79
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.65899.peg.78
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.65899.peg.1904
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.65899.peg.1903
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.65899.peg.1902
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65899.peg.1901
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65899.peg.2164
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65899.peg.2170
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65899.peg.2170
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.65899.peg.1404
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.169
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.775
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.222
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.1555
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65899.peg.2496
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65899.peg.2263
CBSS-89187.3.peg.2957	Glutathione S-transferase domain protein	fig|6666666.65899.peg.497
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65899.peg.1390
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65899.peg.298
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65899.peg.1391
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65899.peg.1082
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65899.peg.266
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65899.peg.1377
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65899.peg.1162
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65899.peg.1376
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65899.peg.64
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65899.peg.2059
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65899.peg.1387
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.65899.peg.1369
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65899.peg.1375
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.65899.peg.455
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.65899.peg.1289
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65899.peg.1797
Carbon_Starvation	Carbon starvation protein A	fig|6666666.65899.peg.482
Carbon_monoxide_oxidation	CTP:molybdopterin cytidylyltransferase	fig|6666666.65899.peg.146
Carbon_monoxide_oxidation	Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	fig|6666666.65899.peg.145
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65899.peg.292
Catechol_branch_of_beta-ketoadipate_pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.65899.peg.2076
Catechol_branch_of_beta-ketoadipate_pathway	Muconolactone isomerase (EC 5.3.3.4)	fig|6666666.65899.peg.2081
Catechol_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.65899.peg.2079
Catechol_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.65899.peg.2080
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1382
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1487
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1800
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.2020
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65899.peg.225
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65899.peg.224
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1139
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1143
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65899.peg.2347
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.65899.peg.565
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65899.peg.2409
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.65899.peg.1123
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.65899.peg.2317
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65899.peg.2316
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.65899.peg.2319
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.65899.peg.2320
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.65899.peg.2322
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65899.peg.2318
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65899.peg.2314
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65899.peg.945
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65899.peg.1516
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65899.peg.1000
Chloroaromatic_degradation_pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.65899.peg.2076
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65899.peg.2207
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Glycine betaine ABC transport system permease protein	fig|6666666.65899.peg.1104
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.907
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.1180
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2137
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2227
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2432
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2433
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.65899.peg.1106
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)	fig|6666666.65899.peg.1105
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.65899.peg.1107
Choline_uptake_and_conversion_to_betaine_clusters	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65899.peg.2207
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.907
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.1180
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2137
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2227
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2432
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2433
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65899.peg.366
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65899.peg.714
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65899.peg.715
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65899.peg.716
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65899.peg.713
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65899.peg.2372
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.65899.peg.473
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65899.peg.713
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.65899.peg.2367
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65899.peg.711
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65899.peg.712
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65899.peg.2296
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65899.peg.1411
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65899.peg.1412
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65899.peg.1493
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65899.peg.1954
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65899.peg.1221
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65899.peg.1414
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65899.peg.948
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65899.peg.1416
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.65899.peg.848
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65899.peg.1413
Citrate_Utilization_System_(CitAB,_CitH,_and_tctABC)	CitH citrate transporter	fig|6666666.65899.peg.632
Citrate_Utilization_System_(CitAB,_CitH,_and_tctABC)	Response regulator CitB of citrate metabolism	fig|6666666.65899.peg.630
Citrate_Utilization_System_(CitAB,_CitH,_and_tctABC)	Signal transduction histidine kinase CitA regulating citrate metabolism	fig|6666666.65899.peg.631
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65899.peg.1318
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.65899.peg.1314
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.65899.peg.1310
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.65899.peg.1313
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65899.peg.1316
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65899.peg.1317
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65899.peg.1315
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.65899.peg.1312
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.65899.peg.1311
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65899.peg.1419
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.65899.peg.1417
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65899.peg.1416
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.65899.peg.2270
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65899.peg.486
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.65899.peg.54
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.65899.peg.563
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65899.peg.487
Coenzyme_A_Biosynthesis	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65899.peg.232
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65899.peg.233
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.65899.peg.1095
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65899.peg.576
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.65899.peg.1394
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.65899.peg.1394
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65899.peg.1012
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.65899.peg.1884
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.65899.peg.1252
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65899.peg.2296
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65899.peg.1411
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65899.peg.1412
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65899.peg.1493
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65899.peg.1414
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65899.peg.1416
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.65899.peg.848
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65899.peg.1413
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65899.peg.261
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65899.peg.381
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.65899.peg.1899
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65899.peg.103
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65899.peg.758
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65899.peg.1811
Copper_homeostasis	Copper chaperone	fig|6666666.65899.peg.759
Copper_homeostasis	Copper resistance protein D	fig|6666666.65899.peg.2039
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65899.peg.103
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65899.peg.758
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65899.peg.1811
Copper_homeostasis	Multicopper oxidase	fig|6666666.65899.peg.1129
Copper_homeostasis	Multicopper oxidase	fig|6666666.65899.peg.1816
Creatine_and_Creatinine_Degradation	Creatinine amidohydrolase (EC 3.5.2.10)	fig|6666666.65899.peg.1702
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.65899.peg.250
Cyanate_hydrolysis	Cyanate hydratase (EC 4.2.1.104)	fig|6666666.65899.peg.617
Cysteine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65899.peg.2053
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65899.peg.382
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65899.peg.468
Cysteine_Biosynthesis	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65899.peg.1024
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65899.peg.381
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65899.peg.1026
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65899.peg.1025
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.65899.peg.1028
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65899.peg.508
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65899.peg.1287
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.65899.peg.2022
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.65899.peg.2278
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.65899.peg.2143
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65899.peg.64
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65899.peg.2059
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65899.peg.2517
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.65899.peg.525
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.65899.peg.569
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65899.peg.1187
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	fig|6666666.65899.peg.191
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.65899.peg.1899
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65899.peg.734
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65899.peg.1229
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65899.peg.2384
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.65899.peg.581
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65899.peg.677
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65899.peg.683
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.65899.peg.1937
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.65899.peg.1936
DNA_processing_cluster	Recombination protein RecR	fig|6666666.65899.peg.1935
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.65899.peg.554
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.65899.peg.908
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.65899.peg.1718
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.65899.peg.560
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.65899.peg.1381
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65899.peg.249
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.65899.peg.204
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.65899.peg.2330
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.65899.peg.1076
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.65899.peg.254
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.65899.peg.80
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65899.peg.293
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65899.peg.1560
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65899.peg.1079
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65899.peg.1080
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.65899.peg.1661
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65899.peg.910
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65899.peg.1186
DNA_repair,_bacterial	RecA protein	fig|6666666.65899.peg.2484
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65899.peg.2505
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65899.peg.754
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65899.peg.2040
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.65899.peg.1996
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.65899.peg.1482
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.65899.peg.1481
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.65899.peg.1177
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.65899.peg.685
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.65899.peg.2174
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.65899.peg.2484
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.65899.peg.1935
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65899.peg.754
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65899.peg.2040
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.65899.peg.2484
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65899.peg.2505
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65899.peg.1220
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.65899.peg.1478
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.65899.peg.2477
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.65899.peg.2484
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.65899.peg.2485
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65899.peg.2414
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.65899.peg.688
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65899.peg.677
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65899.peg.683
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.65899.peg.686
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.65899.peg.685
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.65899.peg.207
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.65899.peg.676
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65899.peg.2347
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.65899.peg.684
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.65899.peg.1859
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.65899.peg.2395
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65899.peg.1881
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65899.peg.677
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65899.peg.683
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65899.peg.350
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.65899.peg.362
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65899.peg.1212
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.65899.peg.348
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.65899.peg.1521
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.65899.peg.1520
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.65899.peg.351
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65899.peg.1212
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.65899.peg.363
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.65899.peg.356
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.65899.peg.357
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.65899.peg.358
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65899.peg.1213
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.65899.peg.274
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65899.peg.1132
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.65899.peg.1402
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.65899.peg.1399
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.65899.peg.1400
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.65899.peg.1401
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.65899.peg.1334
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.65899.peg.1069
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65899.peg.1398
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.65899.peg.1403
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65899.peg.1403
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65899.peg.1550
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.65899.peg.1337
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65899.peg.1228
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65899.peg.1883
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65899.peg.855
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65899.peg.2268
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65899.peg.2266
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65899.peg.855
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65899.peg.2225
Denitrification	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.65899.peg.1567
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.65899.peg.812
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.65899.peg.813
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.65899.peg.814
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.65899.peg.815
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.65899.peg.1780
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.65899.peg.2143
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.65899.peg.2526
Dipeptidases_(EC_3.4.13.-)	Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)	fig|6666666.65899.peg.1720
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65899.peg.1752
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65899.peg.2444
EC699-706	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65899.peg.1152
EC699-706	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65899.peg.1152
EC699-706	Lactam utilization protein LamB	fig|6666666.65899.peg.1151
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65899.peg.2481
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65899.peg.900
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65899.peg.2482
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65899.peg.901
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65899.peg.2480
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65899.peg.899
Encapsulating_protein_for_DyP-type_peroxidase_and_ferritin-like_protein_oligomers	Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup	fig|6666666.65899.peg.1541
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65899.peg.1373
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.65899.peg.1111
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.65899.peg.2022
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.65899.peg.2278
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65899.peg.1371
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65899.peg.1377
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.65899.peg.1372
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65899.peg.1376
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.1767
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.2122
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65899.peg.2525
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65899.peg.2374
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.65899.peg.284
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65899.peg.283
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65899.peg.423
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65899.peg.609
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65899.peg.2391
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65899.peg.980
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65899.peg.1531
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65899.peg.980
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65899.peg.1531
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65899.peg.1153
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65899.peg.1539
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65899.peg.1153
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65899.peg.1539
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)	fig|6666666.65899.peg.2193
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65899.peg.2018
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.65899.peg.979
Fatty_acid_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.944
Fatty_acid_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1120
Fatty_acid_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1134
Fatty_acid_metabolism_cluster	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.65899.peg.1120
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.992
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.1119
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.2392
Fatty_acid_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1388
Fatty_acid_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1944
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.978
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1133
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1769
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1808
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.2161
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65899.peg.284
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65899.peg.2402
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65899.peg.283
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.65899.peg.284
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.55
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.213
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65899.peg.1983
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65899.peg.2402
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65899.peg.283
Fermentations:_Mixed_acid	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.65899.peg.1938
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain	fig|6666666.65899.peg.1117
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport permease EfeU	fig|6666666.65899.peg.1116
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport peroxidase EfeB	fig|6666666.65899.peg.1118
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.65899.peg.700
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.65899.peg.2003
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.65899.peg.2524
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.65899.peg.700
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.65899.peg.2003
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.646
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2307
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2434
Flavohaemoglobin	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65899.peg.234
Flavohaemoglobin	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.65899.peg.1567
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65899.peg.229
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65899.peg.1193
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65899.peg.366
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65899.peg.1233
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.65899.peg.2091
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65899.peg.228
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65899.peg.227
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.65899.peg.2091
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65899.peg.226
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.65899.peg.606
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.65899.peg.1232
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.65899.peg.2468
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65899.peg.229
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65899.peg.225
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65899.peg.228
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65899.peg.227
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.65899.peg.230
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65899.peg.226
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65899.peg.224
Folate_biosynthesis_cluster	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65899.peg.232
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65899.peg.233
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.65899.peg.1575
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.65899.peg.437
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.65899.peg.438
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.65899.peg.439
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.65899.peg.440
Formate_hydrogenase	Formate dehydrogenase O putative subunit	fig|6666666.65899.peg.441
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.65899.peg.1647
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Beta-glucosidase (EC 3.2.1.21)	fig|6666666.65899.peg.1612
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.65899.peg.2502
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.65899.peg.2501
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.65899.peg.2501
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.65899.peg.2501
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65899.peg.2503
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.65899.peg.1370
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.65899.peg.2504
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.65899.peg.475
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65899.peg.2281
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.65899.peg.914
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65899.peg.2380
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65899.peg.2281
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65899.peg.1012
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.65899.peg.1325
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65899.peg.2009
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.65899.peg.2027
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65899.peg.2240
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65899.peg.2255
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65899.peg.1053
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65899.peg.2332
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65899.peg.2380
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65899.peg.2240
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65899.peg.2255
Glutaredoxins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65899.peg.234
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65899.peg.1987
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.65899.peg.183
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65899.peg.1434
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65899.peg.1987
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.65899.peg.369
Glutathione_analogs:_mycothiol	Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	fig|6666666.65899.peg.1804
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.65899.peg.1768
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.65899.peg.1330
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.65899.peg.1098
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.65899.peg.888
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.65899.peg.2439
Glutathione_analogs:_mycothiol	Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR	fig|6666666.65899.peg.1803
Glutathione_analogs:_mycothiol	S-nitrosomycothiol reductase MscR	fig|6666666.65899.peg.1804
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65899.peg.2374
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.65899.peg.958
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.65899.peg.93
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.65899.peg.585
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.65899.peg.942
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65899.peg.1094
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65899.peg.2263
Glycine_and_Serine_Utilization	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65899.peg.2053
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65899.peg.483
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65899.peg.2114
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.65899.peg.2262
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65899.peg.2264
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65899.peg.1431
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65899.peg.1244
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1757
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1893
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1994
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65899.peg.1094
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65899.peg.939
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65899.peg.955
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65899.peg.2263
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1547
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1790
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.65899.peg.2262
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65899.peg.2264
Glycine_cleavage_system	Sodium/glycine symporter GlyP	fig|6666666.65899.peg.1975
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65899.peg.698
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65899.peg.760
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65899.peg.474
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65899.peg.699
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65899.peg.782
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65899.peg.2160
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.65899.peg.866
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.65899.peg.1061
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65899.peg.2352
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65899.peg.2375
Glycogen_metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.65899.peg.867
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65899.peg.2230
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65899.peg.508
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.65899.peg.1111
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65899.peg.1082
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65899.peg.266
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65899.peg.1224
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65899.peg.1377
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65899.peg.1162
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65899.peg.1376
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.1767
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.2122
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65899.peg.2525
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65899.peg.2374
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65899.peg.1375
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65899.peg.508
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.65899.peg.1111
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65899.peg.1082
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65899.peg.1224
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65899.peg.1376
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.1767
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.2122
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65899.peg.2374
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65899.peg.1375
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.65899.peg.2174
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.65899.peg.2173
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65899.peg.2179
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65899.peg.2164
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65899.peg.2170
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.65899.peg.2177
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65899.peg.1345
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65899.peg.1243
Glyoxylate_bypass	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.65899.peg.1158
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65899.peg.2089
Glyoxylate_bypass	Malate synthase G (EC 2.3.3.9)	fig|6666666.65899.peg.1159
Glyoxylate_bypass_cluster	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.65899.peg.1158
Glyoxylate_bypass_cluster	Malate synthase G (EC 2.3.3.9)	fig|6666666.65899.peg.1159
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65899.peg.1035
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65899.peg.2168
GroEL_GroES	Chaperone protein DnaK	fig|6666666.65899.peg.1033
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65899.peg.311
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65899.peg.1597
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.65899.peg.1598
GroEL_GroES	Heat shock protein GrpE	fig|6666666.65899.peg.1034
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.65899.peg.2167
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65899.peg.1035
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65899.peg.2168
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.65899.peg.1033
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.65899.peg.1034
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.65899.peg.2167
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.65899.peg.1036
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65899.peg.2012
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65899.peg.2011
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65899.peg.2169
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65899.peg.2347
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.65899.peg.2134
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.65899.peg.1182
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.65899.peg.128
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.65899.peg.777
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65899.peg.915
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.65899.peg.739
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.65899.peg.927
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system, sensory histidine kinase HrrS	fig|6666666.65899.peg.926
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron-dependent repressor IdeR/DtxR	fig|6666666.65899.peg.2515
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.65899.peg.1342
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65899.peg.1745
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65899.peg.1755
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65899.peg.471
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.65899.peg.2535
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.65899.peg.1754
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.65899.peg.1751
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.65899.peg.1746
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.65899.peg.1747
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65899.peg.1752
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65899.peg.2444
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.65899.peg.1752
Hfl_operon	GTP-binding protein HflX	fig|6666666.65899.peg.2498
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65899.peg.370
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65899.peg.1766
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65899.peg.1765
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65899.peg.373
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65899.peg.372
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65899.peg.371
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.65899.peg.375
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.65899.peg.1326
Histidine_Biosynthesis	Histidinol dehydrogenase (EC 1.1.1.23)	fig|6666666.65899.peg.2359
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.65899.peg.134
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.65899.peg.2368
Histidine_Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.65899.peg.2360
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	fig|6666666.65899.peg.2364
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	fig|6666666.65899.peg.2369
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.65899.peg.2361
Histidine_Biosynthesis	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.65899.peg.2370
Histidine_Biosynthesis	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.65899.peg.1327
Histidine_Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.65899.peg.2367
Histidine_Degradation	Formiminoglutamase (EC 3.5.3.8)	fig|6666666.65899.peg.68
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.65899.peg.1461
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.65899.peg.1459
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.65899.peg.1460
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65899.peg.65
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65899.peg.589
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65899.peg.2529
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65899.peg.2012
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.65899.peg.685
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.65899.peg.207
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.65899.peg.437
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.65899.peg.439
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.65899.peg.886
Inorganic_Sulfur_Assimilation	Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	fig|6666666.65899.peg.1024
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65899.peg.282
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65899.peg.1021
Inorganic_Sulfur_Assimilation	Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	fig|6666666.65899.peg.1022
Inorganic_Sulfur_Assimilation	Ferredoxin-like protein involved in electron transfer	fig|6666666.65899.peg.1023
Inorganic_Sulfur_Assimilation	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65899.peg.1024
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65899.peg.1026
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65899.peg.1025
Inorganic_Sulfur_Assimilation	Sulfate transporter, CysZ-type	fig|6666666.65899.peg.1028
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65899.peg.1576
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65899.peg.2340
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65899.peg.1881
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65899.peg.1606
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65899.peg.2170
Inteins	Translation initiation factor 2	fig|6666666.65899.peg.2452
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.169
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.775
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65899.peg.1357
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.65899.peg.367
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.65899.peg.365
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65899.peg.1358
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.65899.peg.1360
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.65899.peg.1359
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.65899.peg.1361
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.65899.peg.1355
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.65899.peg.1356
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.65899.peg.2272
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65899.peg.2429
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65899.peg.2532
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65899.peg.2431
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65899.peg.258
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65899.peg.257
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65899.peg.1171
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65899.peg.1078
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65899.peg.1711
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65899.peg.1011
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65899.peg.2156
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65899.peg.1011
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65899.peg.2156
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.65899.peg.2406
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.65899.peg.2405
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65899.peg.824
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65899.peg.2209
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65899.peg.2229
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.65899.peg.961
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.65899.peg.1704
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.65899.peg.1708
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65899.peg.1707
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65899.peg.1703
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.65899.peg.1710
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.65899.peg.1709
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.65899.peg.823
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65899.peg.824
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.65899.peg.825
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.1801
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.2514
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65899.peg.2236
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.1801
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.2514
Lactose_utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.65899.peg.203
Lanthionine_Synthetases	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)	fig|6666666.65899.peg.428
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65899.peg.1923
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65899.peg.588
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65899.peg.587
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65899.peg.479
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65899.peg.2269
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65899.peg.1302
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.65899.peg.1303
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65899.peg.1301
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65899.peg.1799
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.65899.peg.1300
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.65899.peg.2260
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.65899.peg.905
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65899.peg.2261
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.65899.peg.2260
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65899.peg.2261
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65899.peg.2335
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.65899.peg.2373
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.65899.peg.2510
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.65899.peg.2510
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65899.peg.876
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65899.peg.878
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65899.peg.1920
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.65899.peg.1921
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65899.peg.467
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65899.peg.821
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65899.peg.2496
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65899.peg.1645
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65899.peg.2376
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.65899.peg.885
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65899.peg.875
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65899.peg.944
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.65899.peg.776
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.65899.peg.777
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1388
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1944
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65899.peg.2164
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.65899.peg.1289
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.65899.peg.858
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.65899.peg.1958
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65899.peg.2160
Maltose_and_Maltodextrin_Utilization	Glucoamylase (EC 3.2.1.3)	fig|6666666.65899.peg.2191
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65899.peg.2375
Maltose_and_Maltodextrin_Utilization	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.65899.peg.2349
Maltose_and_Maltodextrin_Utilization	Maltose O-acetyltransferase (EC 2.3.1.79)	fig|6666666.65899.peg.52
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.65899.peg.974
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.65899.peg.973
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.65899.peg.975
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.65899.peg.94
Maltose_and_Maltodextrin_Utilization	Neopullulanase (EC 3.2.1.135)	fig|6666666.65899.peg.1092
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65899.peg.2503
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.65899.peg.1514
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.65899.peg.1508
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65899.peg.1510
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65899.peg.1713
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65899.peg.1713
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65899.peg.1713
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.65899.peg.1716
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.65899.peg.1721
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65899.peg.1719
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.65899.peg.1732
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65899.peg.1713
Mercuric_reductase	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65899.peg.721
Mercuric_reductase	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65899.peg.1463
Mercuric_reductase	PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase	fig|6666666.65899.peg.721
Mercury_resistance_operon	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65899.peg.721
Mercury_resistance_operon	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65899.peg.1463
Mercury_resistance_operon	Mercuric resistance operon regulatory protein	fig|6666666.65899.peg.1462
Mercury_resistance_operon	Organomercurial lyase (EC 4.99.1.2)	fig|6666666.65899.peg.1464
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.222
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.1555
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.65899.peg.2516
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65899.peg.2308
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65899.peg.2309
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65899.peg.798
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65899.peg.654
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.65899.peg.652
Methionine_Biosynthesis	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.65899.peg.1505
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.65899.peg.2153
Methionine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65899.peg.2053
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65899.peg.382
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65899.peg.468
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.65899.peg.1569
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65899.peg.820
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65899.peg.819
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.65899.peg.1272
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.65899.peg.1578
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.65899.peg.1579
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65899.peg.1577
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65899.peg.2280
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.65899.peg.1564
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.65899.peg.1564
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65899.peg.1029
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65899.peg.1393
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65899.peg.381
Methionine_Degradation	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.65899.peg.1505
Methionine_Degradation	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65899.peg.2053
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.65899.peg.1272
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.65899.peg.1578
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.65899.peg.1579
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65899.peg.1577
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65899.peg.2280
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65899.peg.2225
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65899.peg.1029
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65899.peg.1393
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65899.peg.1029
Methylcitrate_cycle	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.65899.peg.1545
Methylcitrate_cycle	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.65899.peg.1543
Methylcitrate_cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65899.peg.1345
Methylcitrate_cycle	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.65899.peg.1544
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.443
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.613
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.1037
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.443
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.613
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.1037
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65899.peg.1434
Methylglyoxal_Metabolism	NADPH-dependent methylglyoxal reductase (D-lactaldehyde dehydrogenase)	fig|6666666.65899.peg.386
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65899.peg.2490
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65899.peg.226
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65899.peg.1384
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.65899.peg.2213
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.65899.peg.816
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65899.peg.804
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65899.peg.809
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65899.peg.806
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65899.peg.1963
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.65899.peg.1966
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.65899.peg.817
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.65899.peg.817
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65899.peg.805
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65899.peg.1191
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65899.peg.1964
Molybdenum_cofactor_biosynthesis	Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	fig|6666666.65899.peg.145
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65899.peg.1719
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65899.peg.308
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65899.peg.1909
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65899.peg.308
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65899.peg.1909
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65899.peg.307
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65899.peg.1910
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65899.peg.306
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65899.peg.1911
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65899.peg.305
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65899.peg.1912
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65899.peg.304
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65899.peg.1913
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65899.peg.303
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.222
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.1555
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65899.peg.697
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65899.peg.1700
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65899.peg.1699
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.65899.peg.550
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.65899.peg.551
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.65899.peg.552
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.65899.peg.1683
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.65899.peg.1682
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.65899.peg.1681
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.65899.peg.1680
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65899.peg.508
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65899.peg.1000
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.1801
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.2514
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.83
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.603
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.65899.peg.79
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.65899.peg.1985
NAD_and_NADP_cofactor_biosynthesis_global	Niacin transporter NiaP	fig|6666666.65899.peg.757
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65899.peg.2021
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65899.peg.2005
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.65899.peg.2120
Niacin-Choline_transport_and_metabolism	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65899.peg.2207
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.907
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.1180
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2137
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2227
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2432
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65899.peg.2433
Niacin-Choline_transport_and_metabolism	Niacin transporter NiaP	fig|6666666.65899.peg.757
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65899.peg.2021
Nitrate_and_nitrite_ammonification	Nitrate ABC transporter, ATP-binding protein	fig|6666666.65899.peg.623
Nitrate_and_nitrite_ammonification	Nitrate ABC transporter, permease protein	fig|6666666.65899.peg.622
Nitrate_and_nitrite_ammonification	Nitrate/nitrite transporter	fig|6666666.65899.peg.811
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.65899.peg.812
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.65899.peg.813
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.65899.peg.814
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.65899.peg.815
Nitrosative_stress	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.65899.peg.1567
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65899.peg.2429
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65899.peg.2532
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65899.peg.2431
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65899.peg.258
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65899.peg.257
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65899.peg.1171
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65899.peg.1078
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.65899.peg.1114
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.83
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65899.peg.603
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65899.peg.2529
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.65899.peg.1897
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.65899.peg.1058
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.65899.peg.1479
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Nudix hydrolase family protein PA3470	fig|6666666.65899.peg.2082
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.65899.peg.2449
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.65899.peg.2454
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.65899.peg.2450
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.65899.peg.2452
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65899.peg.654
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65899.peg.1193
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65899.peg.1323
One-carbon_metabolism_by_tetrahydropterines	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.65899.peg.1802
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65899.peg.1571
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65899.peg.1571
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.65899.peg.1916
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.65899.peg.2223
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.65899.peg.2510
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.65899.peg.2223
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.65899.peg.2223
Oxidative_stress	Organic hydroperoxide resistance protein	fig|6666666.65899.peg.1968
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.65899.peg.935
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.65899.peg.2177
Oxygen_and_light_sensor_PpaA-PpsR	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65899.peg.915
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65899.peg.1287
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65899.peg.1373
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65899.peg.1371
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65899.peg.64
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65899.peg.2059
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65899.peg.1132
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65899.peg.1387
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.65899.peg.1370
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.65899.peg.1369
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65899.peg.398
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65899.peg.399
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65899.peg.936
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65899.peg.2536
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.646
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2307
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65899.peg.2434
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65899.peg.584
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.222
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65899.peg.1555
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65899.peg.1131
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65899.peg.2009
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65899.peg.2240
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65899.peg.2255
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65899.peg.750
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65899.peg.751
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65899.peg.1906
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65899.peg.1131
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.65899.peg.2310
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65899.peg.1776
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65899.peg.384
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.65899.peg.2313
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65899.peg.2314
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65899.peg.2311
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65899.peg.2308
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65899.peg.2309
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65899.peg.584
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65899.peg.2314
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65899.peg.2311
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65899.peg.2308
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65899.peg.2309
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.65899.peg.701
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.65899.peg.655
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65899.peg.656
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1742
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1819
Persister_Cells	Cell division inhibitor	fig|6666666.65899.peg.1404
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, ATP-binding protein	fig|6666666.65899.peg.119
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, periplasmic binding protein	fig|6666666.65899.peg.122
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein I	fig|6666666.65899.peg.121
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein II	fig|6666666.65899.peg.120
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.65899.peg.1841
Phage_lysis_modules	Phage endolysin	fig|6666666.65899.peg.1825
Phage_lysis_modules	Phage endolysin	fig|6666666.65899.peg.1832
Phage_tail_proteins	Phage minor tail protein	fig|6666666.65899.peg.1830
Phage_tail_proteins_2	Phage minor tail protein	fig|6666666.65899.peg.1830
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.65899.peg.679
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.65899.peg.678
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65899.peg.1954
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.65899.peg.1962
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65899.peg.1221
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65899.peg.948
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65899.peg.370
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65899.peg.1766
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65899.peg.1765
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.65899.peg.549
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65899.peg.1108
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65899.peg.1763
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.65899.peg.221
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65899.peg.370
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65899.peg.1766
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65899.peg.1765
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65899.peg.2170
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65899.peg.2170
Phosphate_metabolism	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65899.peg.373
Phosphate_metabolism	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65899.peg.372
Phosphate_metabolism	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65899.peg.371
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.65899.peg.375
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.65899.peg.1088
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.65899.peg.544
Phosphate_metabolism	secreted alkaline phosphatase	fig|6666666.65899.peg.1537
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.1767
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65899.peg.2122
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.65899.peg.415
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65899.peg.2263
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.65899.peg.1916
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1547
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1790
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.65899.peg.2262
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65899.peg.2264
Photorespiration_(oxidative_C2_cycle)	Malate synthase G (EC 2.3.3.9)	fig|6666666.65899.peg.1159
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65899.peg.2230
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65899.peg.1094
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.694
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.1264
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65899.peg.695
Poly-gamma-glutamate_biosynthesis	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.65899.peg.183
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65899.peg.2009
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.65899.peg.2463
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65899.peg.704
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65899.peg.1029
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.944
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1120
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1134
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65899.peg.944
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.65899.peg.1120
Polyhydroxybutyrate_metabolism	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.992
Polyhydroxybutyrate_metabolism	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.1119
Polyhydroxybutyrate_metabolism	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.2392
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1388
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1944
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65899.peg.1108
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65899.peg.1763
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65899.peg.2525
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.65899.peg.315
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1382
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1487
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1800
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.2020
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.65899.peg.1109
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.65899.peg.1195
Potassium_homeostasis	Potassium channel protein	fig|6666666.65899.peg.1480
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.65899.peg.2052
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.65899.peg.132
Proline,_4-hydroxyproline_uptake_and_utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65899.peg.450
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.65899.peg.2140
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.65899.peg.837
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.65899.peg.2116
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.65899.peg.2113
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65899.peg.2380
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65899.peg.1761
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65899.peg.283
Propionate-CoA_to_Succinate_Module	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.65899.peg.1545
Propionate-CoA_to_Succinate_Module	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.65899.peg.1543
Propionate-CoA_to_Succinate_Module	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65899.peg.1345
Propionate-CoA_to_Succinate_Module	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65899.peg.1345
Propionate-CoA_to_Succinate_Module	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.65899.peg.1544
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65899.peg.1318
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65899.peg.1316
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65899.peg.1317
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65899.peg.1315
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.65899.peg.1916
Protein-L-isoaspartate_O-methyltransferase	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)	fig|6666666.65899.peg.428
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65899.peg.1035
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65899.peg.2168
Protein_chaperones	Chaperone protein DnaK	fig|6666666.65899.peg.1033
Protein_chaperones	ClpB protein	fig|6666666.65899.peg.1051
Protein_chaperones	Heat shock protein GrpE	fig|6666666.65899.peg.1034
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.65899.peg.1036
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65899.peg.2229
Protein_deglycation	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65899.peg.665
Protein_deglycation	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65899.peg.664
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.65899.peg.1984
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.65899.peg.1410
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.65899.peg.2087
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.65899.peg.2006
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65899.peg.2065
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65899.peg.2066
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.65899.peg.245
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.65899.peg.1051
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.65899.peg.254
Proteorhodopsin	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65899.peg.665
Proteorhodopsin	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65899.peg.664
Protocatechuate_branch_of_beta-ketoadipate_pathway	3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)	fig|6666666.65899.peg.2073
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.65899.peg.2074
Protocatechuate_branch_of_beta-ketoadipate_pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.65899.peg.2076
Protocatechuate_branch_of_beta-ketoadipate_pathway	Pca regulon regulatory protein PcaR	fig|6666666.65899.peg.2078
Protocatechuate_branch_of_beta-ketoadipate_pathway	Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)	fig|6666666.65899.peg.2072
Protocatechuate_branch_of_beta-ketoadipate_pathway	Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)	fig|6666666.65899.peg.2071
Protocatechuate_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.65899.peg.2079
Protocatechuate_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.65899.peg.2080
Purine_Utilization	Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS	fig|6666666.65899.peg.148
Purine_Utilization	Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	fig|6666666.65899.peg.145
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.65899.peg.1248
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65899.peg.355
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65899.peg.1439
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.65899.peg.179
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65899.peg.1441
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.65899.peg.1554
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.65899.peg.1637
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65899.peg.350
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.65899.peg.273
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65899.peg.1004
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65899.peg.1589
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.65899.peg.1396
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65899.peg.224
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65899.peg.431
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65899.peg.1591
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65899.peg.1592
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65899.peg.2461
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.65899.peg.2106
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65899.peg.1079
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65899.peg.1080
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65899.peg.431
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65899.peg.1591
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65899.peg.1592
Putative_diaminopropionate_ammonia-lyase_cluster	CTP:molybdopterin cytidylyltransferase	fig|6666666.65899.peg.146
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65899.peg.398
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65899.peg.399
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65899.peg.936
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65899.peg.2532
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65899.peg.483
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65899.peg.2114
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65899.peg.1377
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65899.peg.1244
Pyridoxin_(Vitamin_B6)_Biosynthesis	Predicted transcriptional regulator of pyridoxine metabolism	fig|6666666.65899.peg.2068
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.65899.peg.2172
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.65899.peg.426
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.65899.peg.2067
Pyruvate_Alanine_Serine_Interconversions	Alanine dehydrogenase (EC 1.4.1.1)	fig|6666666.65899.peg.180
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.65899.peg.1605
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65899.peg.2269
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65899.peg.1431
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65899.peg.939
Pyruvate_Alanine_Serine_Interconversions	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.65899.peg.349
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.65899.peg.991
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.65899.peg.1938
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.65899.peg.1542
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65899.peg.2374
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65899.peg.284
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.65899.peg.2394
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.443
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.613
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65899.peg.1037
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65899.peg.174
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65899.peg.196
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65899.peg.283
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65899.peg.2225
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.65899.peg.340
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65899.peg.226
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65899.peg.2461
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65899.peg.656
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.65899.peg.1945
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.65899.peg.1943
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.65899.peg.1948
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65899.peg.1411
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65899.peg.171
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65899.peg.1366
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65899.peg.2133
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.65899.peg.577
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.65899.peg.2531
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.65899.peg.262
RNA_methylation	23S rRNA N-6-methyltransferase ErmCX	fig|6666666.65899.peg.1722
RNA_methylation	FIG011178: rRNA methylase	fig|6666666.65899.peg.547
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.65899.peg.869
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.65899.peg.2427
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65899.peg.2169
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65899.peg.693
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.65899.peg.2407
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.65899.peg.990
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.65899.peg.770
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.694
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65899.peg.1264
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65899.peg.695
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65899.peg.693
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.65899.peg.692
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.65899.peg.689
RNA_modification_cluster	Protein YidD	fig|6666666.65899.peg.691
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65899.peg.690
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.65899.peg.1630
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65899.peg.1700
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65899.peg.1699
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65899.peg.1395
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.65899.peg.2235
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.65899.peg.2033
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65899.peg.2455
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.65899.peg.2108
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.65899.peg.1157
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65899.peg.2383
RNA_processing_orphans	2'-5' RNA ligase	fig|6666666.65899.peg.1588
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65899.peg.916
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65899.peg.1267
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.65899.peg.2336
RNA_pseudouridine_syntheses	Similar to ribosomal large subunit pseudouridine synthase D, type RluD4	fig|6666666.65899.peg.884
RNA_pseudouridine_syntheses	Similar to ribosomal large subunit pseudouridine synthase D, type RluD4	fig|6666666.65899.peg.1262
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65899.peg.1628
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65899.peg.2459
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.65899.peg.833
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.65899.peg.834
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.65899.peg.1661
RecA_and_RecX	RecA protein	fig|6666666.65899.peg.2484
RecA_and_RecX	Regulatory protein RecX	fig|6666666.65899.peg.2485
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65899.peg.697
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65899.peg.1377
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65899.peg.174
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65899.peg.196
Redox-dependent_regulation_of_nucleus_processes	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65899.peg.1162
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65899.peg.2021
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65899.peg.2005
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.65899.peg.1001
Resistance_to_chromium_compounds	Chromate transport protein ChrA	fig|6666666.65899.peg.2050
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65899.peg.677
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65899.peg.683
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65899.peg.1291
Respiratory_dehydrogenases_1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65899.peg.450
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65899.peg.112
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65899.peg.24
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65899.peg.110
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.65899.peg.111
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65899.peg.1798
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.1801
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65899.peg.2514
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65899.peg.1797
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65899.peg.1797
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65899.peg.1796
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65899.peg.1384
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65899.peg.1386
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65899.peg.1383
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65899.peg.1386
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65899.peg.2460
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65899.peg.1384
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65899.peg.2460
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65899.peg.1385
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65899.peg.1384
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65899.peg.1386
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65899.peg.1383
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65899.peg.1386
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.65899.peg.1449
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65899.peg.2460
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65899.peg.1384
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65899.peg.2460
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65899.peg.1385
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65899.peg.2459
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65899.peg.1384
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65899.peg.1386
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65899.peg.1383
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.65899.peg.1326
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65899.peg.1386
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65899.peg.1384
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65899.peg.2209
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65899.peg.1291
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65899.peg.1398
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.65899.peg.1327
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65899.peg.1385
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65899.peg.1387
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65899.peg.582
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.65899.peg.1408
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.65899.peg.2415
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65899.peg.2414
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65899.peg.2414
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65899.peg.1987
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65899.peg.1989
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65899.peg.1991
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.65899.peg.2507
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65899.peg.1988
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.65899.peg.1683
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.65899.peg.1190
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.65899.peg.1641
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.65899.peg.1704
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.65899.peg.1708
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.65899.peg.1617
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.65899.peg.1658
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.65899.peg.1639
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.65899.peg.1664
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.65899.peg.1629
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.65899.peg.1642
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.65899.peg.2412
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65899.peg.1707
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.65899.peg.550
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.65899.peg.2109
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.65899.peg.1666
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.65899.peg.1669
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.65899.peg.1657
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.65899.peg.1138
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.65899.peg.2110
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.65899.peg.1206
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.65899.peg.1663
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.65899.peg.1668
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.65899.peg.1640
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.65899.peg.1202
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.65899.peg.1201
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.65899.peg.1207
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.65899.peg.1207
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.65899.peg.689
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.65899.peg.551
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.65899.peg.1986
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.65899.peg.1671
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.65899.peg.1670
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.65899.peg.1656
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.65899.peg.1643
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65899.peg.1703
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.65899.peg.755
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.65899.peg.1499
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.65899.peg.2424
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.65899.peg.2421
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.65899.peg.2422
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.65899.peg.1448
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.65899.peg.1449
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.65899.peg.1447
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.65899.peg.1446
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.65899.peg.475
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.65899.peg.912
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.65899.peg.913
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.65899.peg.911
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.65899.peg.437
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.65899.peg.439
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.65899.peg.2443
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.992
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.1119
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.2392
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65899.peg.654
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65899.peg.1193
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.992
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.1119
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2077
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.65899.peg.2392
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65899.peg.1345
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65899.peg.1243
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.65899.peg.1111
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65899.peg.1323
Serine-glyoxylate_cycle	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.65899.peg.1158
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65899.peg.2089
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65899.peg.1571
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65899.peg.1571
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65899.peg.980
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65899.peg.1530
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65899.peg.1531
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65899.peg.1094
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65899.peg.1786
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65899.peg.1785
Serine-glyoxylate_cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.65899.peg.2079
Serine-glyoxylate_cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.65899.peg.2080
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65899.peg.483
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65899.peg.2114
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65899.peg.1244
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1757
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1893
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1994
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1757
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1893
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65899.peg.1994
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65899.peg.1094
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65899.peg.2335
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65899.peg.1606
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65899.peg.1131
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65899.peg.1131
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65899.peg.1611
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.65899.peg.2516
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65899.peg.2335
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65899.peg.2413
Single-Rhodanese-domain_proteins	Glutathione S-transferase domain protein	fig|6666666.65899.peg.497
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.65899.peg.745
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1139
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1143
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65899.peg.1004
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65899.peg.1589
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65899.peg.311
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65899.peg.1597
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65899.peg.1577
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65899.peg.2280
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.65899.peg.1209
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.65899.peg.128
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.65899.peg.1360
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65899.peg.258
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65899.peg.257
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1382
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1487
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.1800
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65899.peg.2020
Stationary_phase_repair_cluster	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)	fig|6666666.65899.peg.428
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65899.peg.1440
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.65899.peg.1784
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.65899.peg.1787
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65899.peg.1786
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65899.peg.1785
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1742
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65899.peg.1819
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65899.peg.855
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65899.peg.1345
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65899.peg.1243
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1547
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.1790
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65899.peg.855
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.65899.peg.1083
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65899.peg.1563
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65899.peg.2089
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.65899.peg.2441
TCA_Cycle	Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65899.peg.721
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65899.peg.1786
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65899.peg.1785
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65899.peg.257
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.65899.peg.2290
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65899.peg.798
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.65899.peg.1993
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65899.peg.2282
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65899.peg.2284
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.65899.peg.519
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.65899.peg.519
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.65899.peg.1681
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.65899.peg.1681
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65899.peg.2532
Thiamin_biosynthesis	Hydroxyethylthiazole kinase (EC 2.7.1.50)	fig|6666666.65899.peg.321
Thiamin_biosynthesis	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.65899.peg.323
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65899.peg.901
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65899.peg.1967
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65899.peg.322
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65899.peg.582
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65899.peg.899
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.65899.peg.2510
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65899.peg.2019
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65899.peg.1435
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65899.peg.474
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65899.peg.699
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.65899.peg.284
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65899.peg.283
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65899.peg.939
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65899.peg.1012
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65899.peg.1920
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.65899.peg.1921
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65899.peg.820
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65899.peg.819
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.65899.peg.2246
Threonine_degradation	Threonine dehydrogenase and related Zn-dependent dehydrogenases	fig|6666666.65899.peg.53
Threonine_degradation	Threonine dehydrogenase and related Zn-dependent dehydrogenases	fig|6666666.65899.peg.448
Ton_and_Tol_transport_systems	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)	fig|6666666.65899.peg.428
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.65899.peg.618
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.65899.peg.2449
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65899.peg.2409
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.65899.peg.1709
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.65899.peg.1100
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.65899.peg.802
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.65899.peg.2450
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.65899.peg.1408
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.65899.peg.1123
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.65899.peg.2524
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.65899.peg.2516
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.65899.peg.700
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.65899.peg.2003
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65899.peg.1491
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.65899.peg.1198
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65899.peg.279
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65899.peg.1131
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.65899.peg.1138
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65899.peg.1131
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1139
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1143
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65899.peg.1132
Transcription_repair_cluster	Short-chain dehydrogenase/reductase SDR	fig|6666666.65899.peg.417
Transcription_repair_cluster	Short-chain dehydrogenase/reductase SDR	fig|6666666.65899.peg.2034
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.65899.peg.1123
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.65899.peg.1681
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.65899.peg.1409
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.65899.peg.1681
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.65899.peg.2134
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.65899.peg.1409
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.65899.peg.2422
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.65899.peg.1680
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65899.peg.1390
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.65899.peg.2454
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.65899.peg.1634
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.65899.peg.2452
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.65899.peg.552
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65899.peg.1636
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65899.peg.2436
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.65899.peg.801
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.65899.peg.132
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.65899.peg.1146
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65899.peg.298
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65899.peg.1391
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1139
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65899.peg.1143
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65899.peg.800
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.65899.peg.2424
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.65899.peg.128
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65899.peg.782
Trehalose_Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.65899.peg.333
Trehalose_Biosynthesis	Glucoamylase (EC 3.2.1.3)	fig|6666666.65899.peg.2191
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65899.peg.2352
Trehalose_Biosynthesis	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.65899.peg.2349
Trehalose_Biosynthesis	Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)	fig|6666666.65899.peg.2344
Trehalose_Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.65899.peg.781
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.65899.peg.331
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.65899.peg.2440
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.65899.peg.247
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.65899.peg.1304
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65899.peg.366
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65899.peg.714
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65899.peg.715
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65899.peg.716
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65899.peg.713
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65899.peg.2372
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65899.peg.713
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65899.peg.711
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65899.peg.712
Tryptophan_synthesis	Tryptophan-associated membrane protein	fig|6666666.65899.peg.2371
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.65899.peg.1312
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.65899.peg.861
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.65899.peg.1311
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.65899.peg.482
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.65899.peg.112
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65899.peg.24
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.65899.peg.110
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.65899.peg.111
Type_VI_secretion_systems	ClpB protein	fig|6666666.65899.peg.1051
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65899.peg.1606
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65899.peg.1131
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65899.peg.1131
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65899.peg.1611
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65899.peg.1776
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65899.peg.384
USS-DB-7	ClpB protein	fig|6666666.65899.peg.1051
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.65899.peg.2287
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.65899.peg.2286
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.65899.peg.2285
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65899.peg.2536
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.65899.peg.1349
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.65899.peg.2473
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65899.peg.1228
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65899.peg.1883
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65899.peg.910
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.65899.peg.581
Utilization_of_glutathione_as_a_sulphur_source	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.65899.peg.183
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.65899.peg.1513
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiD	fig|6666666.65899.peg.1596
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.65899.peg.1489
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.65899.peg.1905
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.65899.peg.1175
YjeE	NAD(P)HX dehydratase	fig|6666666.65899.peg.730
YjeE	NAD(P)HX epimerase	fig|6666666.65899.peg.730
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65899.peg.804
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65899.peg.809
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65899.peg.806
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65899.peg.1963
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.65899.peg.1966
cAMP_signaling_in_bacteria	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.65899.peg.91
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65899.peg.2065
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65899.peg.2066
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65899.peg.1441
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.65899.peg.1872
cAMP_signaling_in_bacteria	ElaA protein	fig|6666666.65899.peg.281
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65899.peg.477
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65899.peg.1901
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65899.peg.1798
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65899.peg.1797
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65899.peg.1797
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.65899.peg.1515
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65899.peg.1796
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.169
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65899.peg.775
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65899.peg.1357
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.944
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1120
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65899.peg.1134
n-Phenylalkanoic_acid_degradation	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.65899.peg.1120
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.992
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.1119
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.65899.peg.2392
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1388
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65899.peg.1944
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.978
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1133
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1769
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.1808
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65899.peg.2161
p-Hydroxybenzoate_degradation	P-hydroxybenzoate hydroxylase (EC 1.14.13.2)	fig|6666666.65899.peg.2075
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65899.peg.1881
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65899.peg.754
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65899.peg.2040
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65899.peg.1384
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65899.peg.2460
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65899.peg.2460
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65899.peg.1385
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65899.peg.1419
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.65899.peg.822
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.65899.peg.1422
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.65899.peg.521
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.65899.peg.503
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.65899.peg.522
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.65899.peg.1422
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65899.peg.261
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65899.peg.471
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.65899.peg.521
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.65899.peg.503
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.65899.peg.522
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.65899.peg.471
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65899.peg.2179
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.65899.peg.1433
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.65899.peg.2324
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.65899.peg.722
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.65899.peg.236
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.65899.peg.1179
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.65899.peg.546
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.65899.peg.545
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65899.peg.955
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65899.peg.1457
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.65899.peg.1557
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.65899.peg.527
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.65899.peg.2090
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65899.peg.704
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.65899.peg.2533
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65899.peg.690
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65899.peg.2011
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65899.peg.1628
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65899.peg.2459
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65899.peg.2490
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.65899.peg.1952
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65899.peg.2133
tRNAs	tRNA-Ala-CGC	fig|6666666.65899.rna.25
tRNAs	tRNA-Ala-GGC	fig|6666666.65899.rna.43
tRNAs	tRNA-Ala-GGC	fig|6666666.65899.rna.44
tRNAs	tRNA-Arg-ACG	fig|6666666.65899.rna.39
tRNAs	tRNA-Arg-ACG	fig|6666666.65899.rna.40
tRNAs	tRNA-Arg-CCG	fig|6666666.65899.rna.19
tRNAs	tRNA-Cys-GCA	fig|6666666.65899.rna.56
tRNAs	tRNA-Gly-CCC	fig|6666666.65899.rna.22
tRNAs	tRNA-Gly-GCC	fig|6666666.65899.rna.2
tRNAs	tRNA-Gly-GCC	fig|6666666.65899.rna.54
tRNAs	tRNA-Leu-CAA	fig|6666666.65899.rna.15
tRNAs	tRNA-Leu-CAG	fig|6666666.65899.rna.16
tRNAs	tRNA-Leu-GAG	fig|6666666.65899.rna.29
tRNAs	tRNA-Phe-GAA	fig|6666666.65899.rna.11
tRNAs	tRNA-Pro-CGG	fig|6666666.65899.rna.36
tRNAs	tRNA-Pro-GGG	fig|6666666.65899.rna.28
tRNAs	tRNA-Ser-CGA	fig|6666666.65899.rna.38
tRNAs	tRNA-Trp-CCA	fig|6666666.65899.rna.31
tRNAs	tRNA-Val-CAC	fig|6666666.65899.rna.3
tRNAs	tRNA-Val-GAC	fig|6666666.65899.rna.1
tRNAs	tRNA-Val-GAC	fig|6666666.65899.rna.55