16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1044
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1145
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.2038
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.65901.peg.1043
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.65901.peg.1041
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.65901.peg.1042
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.65901.peg.611
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65901.peg.982
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65901.peg.2030
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65901.peg.652
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65901.peg.2062
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65901.peg.616
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1530
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1823
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65901.peg.843
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65901.peg.1502
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65901.peg.1493
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65901.peg.631
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65901.peg.630
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65901.peg.977
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65901.peg.600
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65901.peg.1828
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65901.peg.1415
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65901.peg.268
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65901.peg.1274
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65901.peg.1476
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65901.peg.1276
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65901.peg.385
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.65901.peg.384
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.65901.peg.730
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.65901.peg.434
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65901.peg.400
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65901.peg.1055
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65901.peg.1730
Acetoin,_butanediol_metabolism	2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)	fig|6666666.65901.peg.1299
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65901.peg.512
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65901.peg.513
Acetoin,_butanediol_metabolism	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.65901.peg.1550
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65901.peg.512
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65901.peg.513
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65901.peg.41
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65901.peg.41
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.65901.peg.1453
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65901.peg.1015
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.482
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.1895
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65901.peg.806
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
Alpha-acetolactate_operon	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.65901.peg.1550
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65901.peg.1014
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.65901.peg.1374
Ammonia_assimilation	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)	fig|6666666.65901.peg.58
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65901.peg.991
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.990
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.1002
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65901.peg.1718
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65901.peg.307
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65901.peg.308
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65901.peg.310
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65901.peg.312
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65901.peg.311
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65901.peg.306
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65901.peg.305
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65901.peg.306
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65901.peg.400
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65901.peg.309
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65901.peg.307
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65901.peg.308
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65901.peg.310
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65901.peg.312
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65901.peg.311
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65901.peg.306
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65901.peg.305
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65901.peg.306
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65901.peg.400
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65901.peg.309
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65901.peg.310
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.65901.peg.1929
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65901.peg.309
Aromatic_amino_acid_degradation	Aromatic amino acid transport protein AroP	fig|6666666.65901.peg.575
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65901.peg.397
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65901.peg.398
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65901.peg.1718
Arsenic_resistance	Arsenical pump-driving ATPase (EC 3.6.3.16)	fig|6666666.65901.peg.1312
Arsenic_resistance	Arsenical resistance operon repressor	fig|6666666.65901.peg.1716
Arsenic_resistance	Arsenical-resistance protein ACR3	fig|6666666.65901.peg.1717
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65901.peg.590
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65901.peg.1980
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65901.peg.1981
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65901.peg.1983
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65901.peg.1982
Bacillus_subtilis_scratch_-_gjo	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65901.peg.369
Bacillus_subtilis_scratch_-_gjo	Ku domain protein	fig|6666666.65901.peg.368
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.782
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1192
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1588
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1811
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65901.peg.193
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1044
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1145
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.2038
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.65901.peg.973
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.65901.peg.1043
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.65901.peg.1052
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65901.peg.1049
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65901.peg.2039
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.65901.peg.1428
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65901.peg.1053
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.65901.peg.1041
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65901.peg.1427
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.65901.peg.1218
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.699
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.2000
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.65901.peg.1302
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.65901.peg.1543
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65901.peg.187
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65901.peg.1114
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.65901.peg.1042
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.782
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1192
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1588
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1811
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1044
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1145
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.2038
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.65901.peg.973
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.65901.peg.1043
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.65901.peg.1052
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65901.peg.1049
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65901.peg.2039
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65901.peg.1053
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.65901.peg.1041
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.699
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.2000
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65901.peg.1999
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.65901.peg.1543
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65901.peg.699
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65901.peg.2000
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.65901.peg.1999
Bacterial_hemoglobins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65901.peg.1913
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.65901.peg.1371
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65901.peg.187
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65901.peg.1114
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.65901.peg.1115
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65901.peg.749
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.65901.peg.1179
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.65901.peg.1349
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.65901.peg.902
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65901.peg.1749
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65901.peg.1748
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65901.peg.1750
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65901.peg.1747
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.65901.peg.926
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65901.peg.980
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65901.peg.796
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65901.peg.872
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65901.peg.865
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65901.peg.562
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.65901.peg.1505
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65901.peg.1548
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65901.peg.563
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.87
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1228
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1290
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1807
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1837
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1838
Biotin_biosynthesis	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.65901.peg.871
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.65901.peg.1084
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65901.peg.866
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65901.peg.864
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65901.peg.872
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65901.peg.562
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.65901.peg.1505
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65901.peg.1573
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65901.peg.563
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65901.peg.872
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65901.peg.865
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65901.peg.562
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.65901.peg.1505
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65901.peg.1548
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65901.peg.1573
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65901.peg.563
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.87
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1228
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1290
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1807
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1837
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1838
Biotin_synthesis_cluster	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.65901.peg.871
Biotin_synthesis_cluster	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65901.peg.866
Biotin_synthesis_cluster	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65901.peg.864
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65901.peg.1840
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65901.peg.327
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65901.peg.328
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65901.peg.329
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65901.peg.519
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65901.peg.512
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65901.peg.513
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65901.peg.1015
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.65901.peg.509
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.65901.peg.510
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65901.peg.514
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.65901.peg.1075
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.65901.peg.315
Broadly_distributed_proteins_not_in_subsystems	Putative oxidoreductase YncB	fig|6666666.65901.peg.1209
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.65901.peg.687
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.65901.peg.740
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.65901.peg.985
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.65901.peg.983
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.65901.peg.984
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65901.peg.953
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.65901.peg.952
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.65901.peg.951
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65901.peg.957
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.65901.peg.1233
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.65901.peg.1234
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65901.peg.176
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65901.peg.981
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65901.peg.40
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65901.peg.1208
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65901.peg.1408
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.65901.peg.1303
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65901.peg.767
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65901.peg.942
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.65901.peg.1302
CBSS-176299.4.peg.1292	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65901.peg.1514
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65901.peg.1107
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65901.peg.1124
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.65901.peg.800
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.65901.peg.799
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65901.peg.796
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65901.peg.805
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.65901.peg.803
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.65901.peg.804
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.65901.peg.802
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65901.peg.1749
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65901.peg.1748
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65901.peg.1750
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65901.peg.1745
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65901.peg.1747
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65901.peg.703
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.57
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.849
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.65901.peg.1842
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65901.peg.1573
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.65901.peg.1076
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65901.peg.1121
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.65901.peg.6
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65901.peg.273
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65901.peg.454
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.160
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.1756
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.65901.peg.1130
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65901.peg.538
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65901.peg.538
CBSS-279010.5.peg.587	Lactam utilization protein LamB	fig|6666666.65901.peg.539
CBSS-279010.5.peg.587	hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	fig|6666666.65901.peg.535
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.65901.peg.694
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65901.peg.1146
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65901.peg.1691
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.65901.peg.1134
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.65901.peg.1135
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65901.peg.696
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.65901.peg.698
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.65901.peg.697
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65901.peg.1718
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.65901.peg.1008
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65901.peg.1997
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65901.peg.2072
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65901.peg.991
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65901.peg.1355
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65901.peg.1021
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65901.peg.1023
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65901.peg.980
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65901.peg.796
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.65901.peg.1255
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65901.peg.41
CBSS-320388.3.peg.3759	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65901.peg.2022
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65901.peg.41
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65901.peg.452
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65901.peg.879
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.65901.peg.1131
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65901.peg.607
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65901.peg.113
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.65901.peg.790
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65901.peg.789
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65901.peg.522
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65901.peg.1082
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65901.peg.946
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65901.peg.521
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65901.peg.703
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65901.peg.903
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.65901.peg.1210
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.65901.peg.983
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.65901.peg.909
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65901.peg.516
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65901.peg.1065
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65901.peg.626
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.65901.peg.491
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65901.peg.1331
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.482
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.1895
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.65901.peg.1696
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.65901.peg.1569
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.65901.peg.706
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.65901.peg.705
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.65901.peg.704
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.65901.peg.707
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.65901.peg.708
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.65901.peg.1861
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.65901.peg.1862
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.65901.peg.1863
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65901.peg.1864
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.731
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.1298
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.65901.peg.758
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.482
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.1895
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.198
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.1522
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65901.peg.879
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65901.peg.1009
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65901.peg.775
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65901.peg.224
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65901.peg.774
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.65901.peg.1196
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65901.peg.339
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65901.peg.14
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65901.peg.787
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65901.peg.546
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65901.peg.788
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65901.peg.1376
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65901.peg.777
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.65901.peg.795
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65901.peg.789
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.65901.peg.320
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.65901.peg.1497
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.65901.peg.727
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65901.peg.1815
Carbon_Starvation	Carbon starvation protein A	fig|6666666.65901.peg.1314
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65901.peg.228
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.782
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1192
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1588
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1811
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65901.peg.193
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65901.peg.194
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.567
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.571
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65901.peg.1078
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.65901.peg.288
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65901.peg.1121
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.65901.peg.583
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.65901.peg.1054
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.65901.peg.1052
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65901.peg.1053
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.65901.peg.1056
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.65901.peg.1057
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.65901.peg.1058
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65901.peg.1055
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65901.peg.1051
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65901.peg.120
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65901.peg.1558
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65901.peg.66
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65901.peg.884
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65901.peg.612
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65901.peg.248
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65901.peg.1097
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65901.peg.1980
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65901.peg.1093
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65901.peg.1981
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.65901.peg.524
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65901.peg.1098
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65901.peg.1098
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65901.peg.1981
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65901.peg.1983
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65901.peg.1982
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65901.peg.1034
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65901.peg.751
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65901.peg.750
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65901.peg.1580
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65901.peg.1901
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65901.peg.625
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65901.peg.748
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65901.peg.117
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65901.peg.747
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65901.peg.749
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65901.peg.847
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.65901.peg.855
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.65901.peg.859
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.65901.peg.856
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65901.peg.853
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65901.peg.852
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65901.peg.854
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.65901.peg.857
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.65901.peg.858
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65901.peg.744
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.65901.peg.746
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65901.peg.747
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.65901.peg.1016
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.65901.peg.1418
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65901.peg.516
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.65901.peg.22
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.65901.peg.289
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65901.peg.514
Coenzyme_A_Biosynthesis	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65901.peg.186
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65901.peg.23
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65901.peg.185
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.65901.peg.599
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65901.peg.273
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.65901.peg.768
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.65901.peg.768
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.65901.peg.22
Coenzyme_A_Biosynthesis_cluster	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65901.peg.186
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65901.peg.23
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65901.peg.185
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.57
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.849
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.65901.peg.1754
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.65901.peg.669
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65901.peg.1034
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65901.peg.751
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65901.peg.750
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65901.peg.1580
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65901.peg.748
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65901.peg.747
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65901.peg.749
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65901.peg.166
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65901.peg.261
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.65901.peg.1865
Copper_Transport_System	Copper resistance protein CopC	fig|6666666.65901.peg.925
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.486
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.1399
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.1519
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.1740
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.2075
Copper_homeostasis	Copper chaperone	fig|6666666.65901.peg.1400
Copper_homeostasis	Copper chaperone	fig|6666666.65901.peg.2074
Copper_homeostasis	Copper resistance protein CopC	fig|6666666.65901.peg.925
Copper_homeostasis	Copper resistance protein D	fig|6666666.65901.peg.1366
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.486
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.1399
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.1519
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.1740
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65901.peg.2075
Copper_homeostasis	Multicopper oxidase	fig|6666666.65901.peg.580
Copper_homeostasis	Multicopper oxidase	fig|6666666.65901.peg.1403
Copper_homeostasis	Multicopper oxidase	fig|6666666.65901.peg.1911
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.65901.peg.1402
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.731
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.1298
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.65901.peg.175
Cysteine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65901.peg.1373
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65901.peg.260
Cysteine_Biosynthesis	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65901.peg.46
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65901.peg.261
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65901.peg.44
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65901.peg.45
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.65901.peg.96
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.65901.peg.42
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65901.peg.499
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65901.peg.729
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.65901.peg.1272
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65901.peg.1376
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65901.peg.903
DNA_Repair_Base_Excision	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65901.peg.369
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.65901.peg.491
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.65901.peg.286
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65901.peg.607
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	fig|6666666.65901.peg.542
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.65901.peg.1865
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65901.peg.1108
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65901.peg.2098
DNA_Repair_Base_Excision	Ku domain protein	fig|6666666.65901.peg.368
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.65901.peg.269
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65901.peg.2017
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65901.peg.2011
DNA_ligases	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65901.peg.369
DNA_ligases	Ku domain protein	fig|6666666.65901.peg.368
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.65901.peg.1878
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.65901.peg.1879
DNA_processing_cluster	Recombination protein RecR	fig|6666666.65901.peg.1880
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.65901.peg.297
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.65901.peg.263
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.65901.peg.1096
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.65901.peg.291
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.65901.peg.783
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65901.peg.176
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.65901.peg.1935
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.65901.peg.1061
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.65901.peg.345
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.65901.peg.172
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.65901.peg.706
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65901.peg.227
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65901.peg.1503
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65901.peg.342
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65901.peg.341
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.65901.peg.1672
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65901.peg.500
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65901.peg.1331
DNA_repair,_bacterial	RecA protein	fig|6666666.65901.peg.869
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65901.peg.888
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65901.peg.1367
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65901.peg.2086
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.65901.peg.1343
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.65901.peg.1593
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.65901.peg.1594
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.65901.peg.2081
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.65901.peg.2009
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.65901.peg.1303
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.65901.peg.869
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.65901.peg.1880
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65901.peg.1367
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65901.peg.2086
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.65901.peg.869
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65901.peg.888
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65901.peg.626
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.65901.peg.1597
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.65901.peg.589
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.65901.peg.869
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.65901.peg.870
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65901.peg.1125
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.65901.peg.2006
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65901.peg.2017
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65901.peg.2011
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.65901.peg.2008
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.65901.peg.2009
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.65901.peg.1938
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.65901.peg.2018
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65901.peg.1078
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.65901.peg.2010
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.65901.peg.1113
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.160
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.1756
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65901.peg.2017
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65901.peg.2011
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65901.peg.154
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.65901.peg.252
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65901.peg.631
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.65901.peg.155
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.65901.peg.1551
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.65901.peg.1552
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.65901.peg.152
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65901.peg.631
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.65901.peg.251
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.65901.peg.257
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.65901.peg.256
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.65901.peg.255
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65901.peg.630
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.65901.peg.8
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65901.peg.577
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.65901.peg.760
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.65901.peg.763
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.65901.peg.762
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.65901.peg.761
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.65901.peg.835
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.65901.peg.17
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65901.peg.764
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.65901.peg.759
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65901.peg.759
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65901.peg.1527
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.65901.peg.827
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65901.peg.622
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65901.peg.1755
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65901.peg.417
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65901.peg.1014
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65901.peg.1012
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65901.peg.417
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65901.peg.977
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.65901.peg.1272
Dihydroxyacetone_kinases	Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29)	fig|6666666.65901.peg.1011
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65901.peg.1153
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65901.peg.1736
EC699-706	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65901.peg.538
EC699-706	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65901.peg.538
EC699-706	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.65901.peg.589
EC699-706	Lactam utilization protein LamB	fig|6666666.65901.peg.539
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65901.peg.865
ECF_class_transporters	ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65901.peg.427
ECF_class_transporters	ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65901.peg.427
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65901.peg.381
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65901.peg.866
ECF_class_transporters	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65901.peg.425
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65901.peg.380
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65901.peg.864
ECF_class_transporters	Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65901.peg.426
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65901.peg.382
Encapsulating_protein_for_DyP-type_peroxidase_and_ferritin-like_protein_oligomers	Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup	fig|6666666.65901.peg.354
Encapsulating_protein_for_DyP-type_peroxidase_and_ferritin-like_protein_oligomers	Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup	fig|6666666.65901.peg.355
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65901.peg.791
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.65901.peg.1188
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65901.peg.793
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65901.peg.787
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.65901.peg.792
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65901.peg.788
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65901.peg.1724
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65901.peg.910
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65901.peg.1095
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.65901.peg.6
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65901.peg.7
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65901.peg.85
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65901.peg.1545
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65901.peg.85
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65901.peg.1545
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65901.peg.537
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65901.peg.1510
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65901.peg.1535
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65901.peg.537
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65901.peg.1510
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65901.peg.1535
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65901.peg.1514
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.65901.peg.86
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65901.peg.6
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65901.peg.430
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65901.peg.7
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.65901.peg.6
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65901.peg.2062
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65901.peg.430
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65901.peg.7
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65901.peg.724
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65901.peg.725
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.65901.peg.726
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.65901.peg.909
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1044
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1145
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.2038
Flavohaemoglobin	ABC-type Fe3+-siderophore transport system, permease 2 component	fig|6666666.65901.peg.100
Flavohaemoglobin	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65901.peg.1913
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65901.peg.189
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65901.peg.652
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65901.peg.248
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65901.peg.1097
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65901.peg.616
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.65901.peg.1226
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65901.peg.190
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65901.peg.191
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.65901.peg.1226
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65901.peg.192
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65901.peg.1098
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65901.peg.1098
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.65901.peg.617
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.65901.peg.967
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65901.peg.189
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65901.peg.193
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65901.peg.190
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65901.peg.191
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.65901.peg.188
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65901.peg.192
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65901.peg.194
Folate_biosynthesis_cluster	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65901.peg.186
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65901.peg.23
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65901.peg.185
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.65901.peg.1491
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.65901.peg.1679
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.65901.peg.523
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.65901.peg.570
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65901.peg.1020
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.65901.peg.1922
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65901.peg.1104
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65901.peg.1020
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.57
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.849
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.65901.peg.841
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)	fig|6666666.65901.peg.58
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65901.peg.1348
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.65901.peg.1914
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.990
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.1002
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65901.peg.1062
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65901.peg.1104
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.990
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.1002
Glutaredoxins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.65901.peg.1913
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65901.peg.1336
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65901.peg.946
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65901.peg.1336
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.65901.peg.245
Glutathione_analogs:_mycothiol	Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	fig|6666666.65901.peg.1809
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.65901.peg.1720
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.65901.peg.838
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.65901.peg.596
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.65901.peg.390
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.65901.peg.1149
Glutathione_analogs:_mycothiol	Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR	fig|6666666.65901.peg.1810
Glutathione_analogs:_mycothiol	S-nitrosomycothiol reductase MscR	fig|6666666.65901.peg.1809
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65901.peg.1095
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.65901.peg.108
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.65901.peg.109
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.65901.peg.122
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3)	fig|6666666.65901.peg.124
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)	fig|6666666.65901.peg.123
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.65901.peg.333
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.65901.peg.126
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.65901.peg.127
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.65901.peg.586
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.65901.peg.112
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.65901.peg.1031
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65901.peg.2062
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.38
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.962
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65901.peg.930
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.65901.peg.976
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65901.peg.228
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Dihydroxyacetone kinase family protein	fig|6666666.65901.peg.270
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.65901.peg.108
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.65901.peg.109
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.65901.peg.333
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.65901.peg.1139
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65901.peg.600
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65901.peg.1009
Glycine_and_Serine_Utilization	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65901.peg.1373
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65901.peg.1237
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.65901.peg.1008
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65901.peg.1010
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65901.peg.948
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65901.peg.1732
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65901.peg.1871
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65901.peg.600
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65901.peg.2047
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65901.peg.113
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65901.peg.1009
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1530
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1823
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.65901.peg.1008
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65901.peg.1010
Glycine_cleavage_system	Sodium/glycine symporter GlyP	fig|6666666.65901.peg.1326
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65901.peg.1997
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65901.peg.2072
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65901.peg.848
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65901.peg.1996
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65901.peg.477
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65901.peg.1289
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.65901.peg.409
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65901.peg.1083
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65901.peg.1099
Glycogen_metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.65901.peg.408
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65901.peg.982
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65901.peg.499
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.65901.peg.1188
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65901.peg.339
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65901.peg.14
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65901.peg.623
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65901.peg.787
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65901.peg.546
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65901.peg.788
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65901.peg.1724
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65901.peg.910
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65901.peg.1095
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65901.peg.789
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65901.peg.499
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.65901.peg.1188
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65901.peg.339
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65901.peg.623
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65901.peg.788
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65901.peg.1724
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65901.peg.1095
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65901.peg.789
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.65901.peg.1303
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.65901.peg.1302
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65901.peg.1307
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.731
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.1298
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
Glycyl-tRNA_synthetase_containing_cluster	Transcriptional regulator in glycyl-tRNA synthetase containing cluster	fig|6666666.65901.peg.1306
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.65901.peg.1305
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65901.peg.817
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65901.peg.677
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65901.peg.1224
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65901.peg.35
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65901.peg.1294
GroEL_GroES	Chaperone protein DnaK	fig|6666666.65901.peg.37
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65901.peg.213
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65901.peg.1461
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.65901.peg.1460
GroEL_GroES	Heat shock protein GrpE	fig|6666666.65901.peg.36
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.65901.peg.1293
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65901.peg.35
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65901.peg.1294
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.65901.peg.37
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.65901.peg.36
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.65901.peg.1293
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.65901.peg.34
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65901.peg.1351
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65901.peg.1350
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65901.peg.1295
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65901.peg.1078
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.65901.peg.1268
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.65901.peg.611
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.65901.peg.1429
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.65901.peg.1216
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.65901.peg.821
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65901.peg.1745
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65901.peg.1734
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65901.peg.526
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.65901.peg.919
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.65901.peg.1735
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.65901.peg.1737
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.65901.peg.1742
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.65901.peg.1741
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65901.peg.1153
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65901.peg.1736
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.65901.peg.1736
Hfl_operon	GTP-binding protein HflX	fig|6666666.65901.peg.883
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65901.peg.54
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65901.peg.244
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65901.peg.1725
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65901.peg.1726
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65901.peg.241
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65901.peg.242
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65901.peg.243
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.65901.peg.240
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65901.peg.326
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65901.peg.913
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65901.peg.1351
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.65901.peg.2009
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.65901.peg.1938
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.65901.peg.392
Inorganic_Sulfur_Assimilation	Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	fig|6666666.65901.peg.46
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65901.peg.49
Inorganic_Sulfur_Assimilation	Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	fig|6666666.65901.peg.48
Inorganic_Sulfur_Assimilation	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65901.peg.46
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65901.peg.44
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65901.peg.45
Inorganic_Sulfur_Assimilation	Sulfate transporter, CysZ-type	fig|6666666.65901.peg.42
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65901.peg.1071
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65901.peg.1490
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.160
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.1756
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65901.peg.1669
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
Inteins	Translation initiation factor 2	fig|6666666.65901.peg.951
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.482
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.1895
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65901.peg.806
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.65901.peg.247
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.65901.peg.249
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65901.peg.805
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.65901.peg.803
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.65901.peg.804
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.65901.peg.802
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.65901.peg.808
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.65901.peg.807
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.65901.peg.1018
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65901.peg.1142
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65901.peg.916
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65901.peg.1144
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65901.peg.167
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65901.peg.169
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65901.peg.531
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65901.peg.343
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65901.peg.1631
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.65901.peg.1118
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.65901.peg.1117
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65901.peg.448
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65901.peg.981
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.65901.peg.106
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.65901.peg.1638
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.65901.peg.1634
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65901.peg.1635
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65901.peg.1639
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.65901.peg.1632
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.65901.peg.1633
Lactate_utilization	L-lactate permease	fig|6666666.65901.peg.450
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.65901.peg.665
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.65901.peg.449
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65901.peg.448
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.65901.peg.447
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.900
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.1751
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65901.peg.987
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.900
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.1751
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.65901.peg.1196
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65901.peg.1840
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65901.peg.327
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65901.peg.328
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65901.peg.329
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65901.peg.519
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65901.peg.1015
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65901.peg.1015
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65901.peg.1012
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1530
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1823
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65901.peg.716
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.65901.peg.715
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65901.peg.717
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65901.peg.1812
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.65901.peg.718
Lipid_A_modifications	Sensor protein basS/pmrB (EC 2.7.3.-)	fig|6666666.65901.peg.646
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.65901.peg.1006
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65901.peg.1007
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.65901.peg.1006
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65901.peg.1007
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.65901.peg.1402
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65901.peg.1065
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.65901.peg.1094
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.65901.peg.892
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.65901.peg.892
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65901.peg.396
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65901.peg.399
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65901.peg.1843
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.65901.peg.1842
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65901.peg.452
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65901.peg.879
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65901.peg.1100
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65901.peg.1681
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.65901.peg.393
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65901.peg.400
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65901.peg.688
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.65901.peg.1215
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.65901.peg.1216
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.731
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.1298
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.65901.peg.727
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.65901.peg.1899
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65901.peg.1289
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65901.peg.1099
Maltose_and_Maltodextrin_Utilization	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.65901.peg.1080
Maltose_and_Maltodextrin_Utilization	Neopullulanase (EC 3.2.1.135)	fig|6666666.65901.peg.1916
Mannitol_Utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.65901.peg.1670
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65901.peg.181
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.65901.peg.1560
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.65901.peg.1566
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65901.peg.1564
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65901.peg.1629
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65901.peg.1629
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65901.peg.1629
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.65901.peg.1622
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.65901.peg.1617
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65901.peg.1618
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.65901.peg.1609
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65901.peg.1629
Mercuric_reductase	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65901.peg.1395
Mercury_resistance_operon	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65901.peg.1395
Mercury_resistance_operon	Mercuric resistance operon regulatory protein	fig|6666666.65901.peg.1396
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.198
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.1522
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.65901.peg.902
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65901.peg.1045
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65901.peg.1046
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65901.peg.462
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65901.peg.2030
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.65901.peg.2031
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.65901.peg.1280
Methionine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65901.peg.1373
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65901.peg.260
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.65901.peg.1499
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65901.peg.453
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65901.peg.454
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.65901.peg.1487
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.65901.peg.1486
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65901.peg.1488
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65901.peg.1489
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.65901.peg.1500
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.65901.peg.1500
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65901.peg.41
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65901.peg.769
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65901.peg.590
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65901.peg.261
Methionine_Degradation	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65901.peg.1373
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.65901.peg.1487
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.65901.peg.1486
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65901.peg.1488
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65901.peg.1489
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65901.peg.977
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65901.peg.41
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65901.peg.769
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65901.peg.590
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65901.peg.41
Methylcitrate_cycle	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.65901.peg.1531
Methylcitrate_cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65901.peg.817
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.38
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.962
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.38
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.962
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65901.peg.946
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65901.peg.873
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65901.peg.1618
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65901.peg.215
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65901.peg.1851
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65901.peg.215
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65901.peg.1851
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65901.peg.216
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65901.peg.1850
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65901.peg.217
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65901.peg.1849
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65901.peg.218
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65901.peg.1848
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65901.peg.219
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65901.peg.1847
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65901.peg.220
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65901.peg.1846
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.65901.peg.1070
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.198
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.1522
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65901.peg.1998
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65901.peg.1641
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65901.peg.1642
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.65901.peg.300
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.65901.peg.299
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.65901.peg.298
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.65901.peg.1645
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.65901.peg.1646
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.65901.peg.1647
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.65901.peg.1649
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65901.peg.499
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65901.peg.66
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.900
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.1751
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65901.peg.703
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.65901.peg.861
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.65901.peg.861
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.65901.peg.707
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.65901.peg.1334
NAD_and_NADP_cofactor_biosynthesis_global	Niacin transporter NiaP	fig|6666666.65901.peg.2076
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65901.peg.1358
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65901.peg.1344
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.65901.peg.1241
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.65901.peg.52
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.65901.peg.612
Niacin-Choline_transport_and_metabolism	Niacin transporter NiaP	fig|6666666.65901.peg.2076
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65901.peg.1358
Nitric_oxide_synthase	putative cytochrome P450 hydroxylase	fig|6666666.65901.peg.495
Nonhomologous_End-Joining_in_Bacteria	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65901.peg.369
Nonhomologous_End-Joining_in_Bacteria	Ku domain protein	fig|6666666.65901.peg.368
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65901.peg.1142
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65901.peg.916
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65901.peg.1144
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65901.peg.167
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65901.peg.169
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65901.peg.531
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65901.peg.343
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.65901.peg.1185
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65901.peg.703
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65901.peg.913
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.65901.peg.1867
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.65901.peg.429
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.65901.peg.1596
NusA-TFII_Cluster	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65901.peg.1163
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.65901.peg.952
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.65901.peg.1162
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.65901.peg.951
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65901.peg.2030
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65901.peg.652
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65901.peg.843
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65901.peg.1493
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65901.peg.1493
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.65901.peg.1547
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.65901.peg.892
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.65901.peg.130
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.65901.peg.1305
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65901.peg.729
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65901.peg.791
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65901.peg.793
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65901.peg.1376
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65901.peg.577
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65901.peg.777
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.65901.peg.794
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.65901.peg.795
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65901.peg.129
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65901.peg.920
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1044
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.1145
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65901.peg.2038
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65901.peg.334
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.198
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65901.peg.1522
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65901.peg.578
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65901.peg.1348
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.990
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65901.peg.1002
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65901.peg.1859
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65901.peg.2089
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65901.peg.2090
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65901.peg.578
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.65901.peg.1047
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65901.peg.1836
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65901.peg.258
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.65901.peg.1050
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65901.peg.1051
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65901.peg.1048
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65901.peg.1045
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65901.peg.1046
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65901.peg.334
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65901.peg.1051
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65901.peg.1048
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65901.peg.1045
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65901.peg.1046
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.65901.peg.1994
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.65901.peg.2034
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65901.peg.2033
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65901.peg.1748
Persister_Cells	Cell division inhibitor	fig|6666666.65901.peg.758
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, ATP-binding protein	fig|6666666.65901.peg.1439
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, periplasmic binding protein	fig|6666666.65901.peg.1436
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein I	fig|6666666.65901.peg.1437
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein II	fig|6666666.65901.peg.1438
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.65901.peg.1802
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.65901.peg.1802
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.65901.peg.2015
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.65901.peg.2016
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65901.peg.1901
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.65901.peg.574
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65901.peg.625
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65901.peg.117
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65901.peg.54
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65901.peg.244
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65901.peg.1725
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65901.peg.1726
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.65901.peg.1074
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.65901.peg.1854
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65901.peg.1194
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65901.peg.1728
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.65901.peg.199
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65901.peg.54
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65901.peg.244
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65901.peg.1725
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65901.peg.1726
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
Phosphate_metabolism	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65901.peg.241
Phosphate_metabolism	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65901.peg.242
Phosphate_metabolism	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65901.peg.243
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.65901.peg.240
Phosphate_metabolism	Sodium-dependent phosphate transporter	fig|6666666.65901.peg.52
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65901.peg.1724
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.65901.peg.1243
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65901.peg.1009
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.65901.peg.1547
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1530
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1823
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.65901.peg.1008
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65901.peg.1010
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65901.peg.982
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65901.peg.600
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.699
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.2000
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65901.peg.1999
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65901.peg.1348
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.65901.peg.961
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65901.peg.1991
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65901.peg.1194
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65901.peg.1728
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65901.peg.910
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.65901.peg.210
Polysaccharide_deacetylases	Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)	fig|6666666.65901.peg.772
Polysaccharide_deacetylases	Polysaccharide deacetylase	fig|6666666.65901.peg.445
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.782
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1192
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1588
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1811
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.65901.peg.1193
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.65901.peg.650
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.65901.peg.157
Potassium_homeostasis	Potassium channel protein	fig|6666666.65901.peg.1595
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.65901.peg.1372
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.65901.peg.1426
Proline,_4-hydroxyproline_uptake_and_utilization	L-Proline/Glycine betaine transporter ProP	fig|6666666.65901.peg.573
Proline,_4-hydroxyproline_uptake_and_utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65901.peg.895
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.65901.peg.1270
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.65901.peg.438
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.65901.peg.1238
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.65901.peg.1236
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65901.peg.1104
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65901.peg.1730
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65901.peg.7
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65901.peg.847
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65901.peg.853
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65901.peg.852
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65901.peg.854
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.65901.peg.1547
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65901.peg.35
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65901.peg.1294
Protein_chaperones	Chaperone protein DnaK	fig|6666666.65901.peg.37
Protein_chaperones	ClpB protein	fig|6666666.65901.peg.25
Protein_chaperones	Heat shock protein GrpE	fig|6666666.65901.peg.36
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.65901.peg.34
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65901.peg.981
Protein_deglycation	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65901.peg.2023
Protein_deglycation	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65901.peg.2022
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.65901.peg.1332
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.65901.peg.752
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.65901.peg.1285
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.65901.peg.1222
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.65901.peg.1345
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65901.peg.1219
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65901.peg.1220
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.65901.peg.178
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.65901.peg.25
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.65901.peg.172
Proteorhodopsin	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65901.peg.2023
Proteorhodopsin	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65901.peg.2022
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.65901.peg.851
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.65901.peg.673
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65901.peg.362
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65901.peg.943
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.65901.peg.1921
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65901.peg.941
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.65901.peg.1690
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65901.peg.154
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.65901.peg.10
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65901.peg.1469
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.65901.peg.766
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65901.peg.194
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65901.peg.1466
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65901.peg.1467
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65901.peg.424
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65901.peg.959
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65901.peg.1181
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.65901.peg.1230
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65901.peg.342
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65901.peg.341
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65901.peg.1466
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65901.peg.1467
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65901.peg.129
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65901.peg.916
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65901.peg.1237
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65901.peg.787
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.65901.peg.1300
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.65901.peg.372
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.65901.peg.850
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.65901.peg.1453
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65901.peg.1015
Pyruvate_Alanine_Serine_Interconversions	D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	fig|6666666.65901.peg.896
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65901.peg.948
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65901.peg.2047
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.65901.peg.79
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.65901.peg.1532
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65901.peg.1095
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65901.peg.6
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.65901.peg.1112
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.38
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65901.peg.962
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65901.peg.1155
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65901.peg.1923
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65901.peg.7
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65901.peg.977
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.65901.peg.33
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65901.peg.192
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65901.peg.424
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65901.peg.959
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65901.peg.1181
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65901.peg.2033
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.65901.peg.1886
Queuosine-Archaeosine_Biosynthesis	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65901.peg.425
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.65901.peg.1887
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.65901.peg.1906
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65901.peg.751
Quinone_oxidoreductase_family	Putative oxidoreductase YncB	fig|6666666.65901.peg.1209
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65901.peg.797
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65901.peg.1896
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65901.peg.1266
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.65901.peg.915
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.65901.peg.165
RNA_methylation	FIG011178: rRNA methylase	fig|6666666.65901.peg.302
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.65901.peg.406
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.65901.peg.1140
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65901.peg.1295
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65901.peg.2001
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.65901.peg.1119
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.65901.peg.80
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.65901.peg.487
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.699
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65901.peg.2000
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65901.peg.1999
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65901.peg.2001
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.65901.peg.2002
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.65901.peg.2005
RNA_modification_cluster	Protein YidD	fig|6666666.65901.peg.2003
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65901.peg.2004
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.65901.peg.1697
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65901.peg.1641
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65901.peg.1642
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65901.peg.767
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.65901.peg.986
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.65901.peg.1361
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65901.peg.953
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.65901.peg.1232
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65901.peg.1107
RNA_processing_orphans	2'-5' RNA ligase	fig|6666666.65901.peg.1932
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65901.peg.144
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65901.peg.696
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.65901.peg.1066
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65901.peg.1699
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65901.peg.957
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.65901.peg.442
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.65901.peg.441
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.65901.peg.1498
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.65901.peg.1672
RecA_and_RecX	RecA protein	fig|6666666.65901.peg.869
RecA_and_RecX	Regulatory protein RecX	fig|6666666.65901.peg.870
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65901.peg.1998
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65901.peg.787
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65901.peg.1155
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65901.peg.1923
Redox-dependent_regulation_of_nucleus_processes	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65901.peg.546
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65901.peg.1358
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65901.peg.1344
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.65901.peg.65
Resistance_to_chromium_compounds	Chromate transport protein ChrA	fig|6666666.65901.peg.353
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65901.peg.2017
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65901.peg.2011
Respiratory_dehydrogenases_1	D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	fig|6666666.65901.peg.896
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65901.peg.723
Respiratory_dehydrogenases_1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65901.peg.895
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65901.peg.1814
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.900
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65901.peg.1751
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65901.peg.1815
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65901.peg.1815
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65901.peg.1816
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65901.peg.780
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65901.peg.778
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65901.peg.781
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65901.peg.778
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65901.peg.958
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65901.peg.780
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65901.peg.958
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65901.peg.779
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65901.peg.780
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65901.peg.778
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65901.peg.781
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.65901.peg.861
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65901.peg.778
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65901.peg.780
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65901.peg.723
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65901.peg.764
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.65901.peg.840
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65901.peg.779
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65901.peg.777
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65901.peg.268
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.65901.peg.754
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.65901.peg.1126
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65901.peg.1125
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65901.peg.1125
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65901.peg.1336
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65901.peg.1338
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65901.peg.1340
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.65901.peg.890
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65901.peg.1337
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.65901.peg.1645
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.65901.peg.655
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.65901.peg.1686
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.65901.peg.1638
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.65901.peg.1634
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.65901.peg.1444
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.65901.peg.1675
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.65901.peg.1688
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.65901.peg.1665
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.65901.peg.1698
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.65901.peg.1685
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.65901.peg.1122
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65901.peg.1635
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.65901.peg.300
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.65901.peg.1233
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.65901.peg.1663
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.65901.peg.1660
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.65901.peg.1676
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.65901.peg.572
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.65901.peg.1234
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.65901.peg.639
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.65901.peg.1666
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.65901.peg.1661
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.65901.peg.1687
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.65901.peg.643
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.65901.peg.644
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.65901.peg.638
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.65901.peg.638
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.65901.peg.2005
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.65901.peg.299
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.65901.peg.1335
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.65901.peg.1658
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.65901.peg.1659
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.65901.peg.1677
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.65901.peg.1684
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65901.peg.1639
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.65901.peg.2085
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.65901.peg.1574
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.65901.peg.1138
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.65901.peg.1134
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.65901.peg.1135
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.65901.peg.935
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.65901.peg.936
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.65901.peg.937
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.65901.peg.523
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.65901.peg.570
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.65901.peg.1152
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65901.peg.2030
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65901.peg.652
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65901.peg.817
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65901.peg.677
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.65901.peg.1188
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65901.peg.843
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65901.peg.1103
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65901.peg.1224
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65901.peg.1493
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65901.peg.1493
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65901.peg.85
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65901.peg.1513
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65901.peg.1545
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65901.peg.600
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65901.peg.1827
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65901.peg.1828
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65901.peg.1237
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65901.peg.1732
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65901.peg.1871
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65901.peg.1732
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65901.peg.1871
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65901.peg.600
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65901.peg.1065
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65901.peg.385
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65901.peg.1669
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65901.peg.578
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65901.peg.884
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65901.peg.578
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65901.peg.1447
Sialic_Acid_Metabolism	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.65901.peg.1196
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.65901.peg.902
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65901.peg.1065
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65901.peg.1124
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.65901.peg.2095
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.567
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.571
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65901.peg.1469
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65901.peg.213
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65901.peg.1461
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65901.peg.1488
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65901.peg.1489
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.65901.peg.636
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.65901.peg.1429
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.65901.peg.803
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65901.peg.167
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65901.peg.169
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.782
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1192
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1588
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65901.peg.1811
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.65901.peg.1043
Stress_related_cluster	Arsenical pump-driving ATPase (EC 3.6.3.16)	fig|6666666.65901.peg.1312
Stress_related_cluster	Carbon starvation protein A	fig|6666666.65901.peg.1314
Stress_related_cluster	FIG059250: hypothetical protein	fig|6666666.65901.peg.1313
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65901.peg.942
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.65901.peg.1829
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.65901.peg.1826
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65901.peg.1827
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65901.peg.1828
Sucrose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.65901.peg.1670
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65901.peg.1748
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65901.peg.417
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65901.peg.817
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65901.peg.677
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1530
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65901.peg.1823
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65901.peg.417
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.65901.peg.337
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65901.peg.1502
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65901.peg.1224
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.65901.peg.1151
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65901.peg.1827
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65901.peg.1828
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65901.peg.169
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.65901.peg.1029
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65901.peg.462
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.65901.peg.1341
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65901.peg.1021
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65901.peg.1023
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.65901.peg.1647
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.65901.peg.1647
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65901.peg.916
Thiamin_biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.65901.peg.1414
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65901.peg.380
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.65901.peg.1413
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65901.peg.1411
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65901.peg.1415
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65901.peg.268
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.65901.peg.1412
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65901.peg.382
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.65901.peg.893
Thioredoxin-disulfide_reductase	Alkylhydroperoxidase protein D	fig|6666666.65901.peg.894
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.65901.peg.892
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65901.peg.1355
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65901.peg.848
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65901.peg.1996
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.65901.peg.6
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65901.peg.7
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65901.peg.2047
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.57
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65901.peg.849
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65901.peg.1843
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.65901.peg.1842
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65901.peg.453
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65901.peg.454
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.65901.peg.993
Threonine_degradation	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.65901.peg.1075
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.65901.peg.1330
Toxin-antitoxin_replicon_stabilization_systems	ParD protein (antitoxin to ParE)	fig|6666666.65901.peg.660
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.65901.peg.195
Transcription_factors_bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65901.peg.1163
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65901.peg.1121
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.65901.peg.1633
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.65901.peg.594
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.65901.peg.458
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.65901.peg.1162
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.65901.peg.754
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.65901.peg.583
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.65901.peg.909
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.65901.peg.902
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65901.peg.411
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65901.peg.1583
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65901.peg.1995
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.65901.peg.647
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65901.peg.1718
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65901.peg.578
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.65901.peg.572
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65901.peg.578
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.567
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.571
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65901.peg.577
Transcription_repair_cluster	Short-chain dehydrogenase/reductase SDR	fig|6666666.65901.peg.1362
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.65901.peg.583
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.65901.peg.1647
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.65901.peg.753
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.65901.peg.1647
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.65901.peg.1268
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.65901.peg.753
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.65901.peg.1135
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.65901.peg.1649
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65901.peg.775
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.65901.peg.952
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.65901.peg.1693
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.65901.peg.951
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.65901.peg.298
Translation_termination_factors_bacterial	Hypothetical protein YaeJ with similarity to translation release factor	fig|6666666.65901.peg.350
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65901.peg.1146
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65901.peg.1691
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.65901.peg.459
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.65901.peg.1426
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.65901.peg.564
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65901.peg.224
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65901.peg.774
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.567
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65901.peg.571
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.65901.peg.1138
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.65901.peg.1429
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65901.peg.477
Trehalose_Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.65901.peg.161
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65901.peg.1083
Trehalose_Biosynthesis	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.65901.peg.1080
Trehalose_Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.65901.peg.478
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.65901.peg.163
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.65901.peg.1150
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65901.peg.248
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65901.peg.1097
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65901.peg.1980
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65901.peg.1093
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65901.peg.1981
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65901.peg.1098
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65901.peg.1098
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65901.peg.1981
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65901.peg.1983
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65901.peg.1982
Tryptophan_synthesis	Tryptophan-associated membrane protein	fig|6666666.65901.peg.1092
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.65901.peg.857
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.65901.peg.413
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.65901.peg.858
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.65901.peg.1314
Type_VI_secretion_systems	ClpB protein	fig|6666666.65901.peg.25
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65901.peg.1669
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65901.peg.578
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65901.peg.578
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65901.peg.1447
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65901.peg.1836
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65901.peg.258
USS-DB-7	ClpB protein	fig|6666666.65901.peg.25
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.65901.peg.1026
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.65901.peg.1025
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.65901.peg.1024
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65901.peg.920
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.65901.peg.813
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.65901.peg.973
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65901.peg.622
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65901.peg.1755
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65901.peg.500
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.65901.peg.269
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.65901.peg.1561
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiD	fig|6666666.65901.peg.1462
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.65901.peg.1586
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.65901.peg.1860
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.65901.peg.528
YjeE	NAD(P)HX dehydratase	fig|6666666.65901.peg.2099
YjeE	NAD(P)HX dehydratase	fig|6666666.65901.peg.2100
YjeE	NAD(P)HX epimerase	fig|6666666.65901.peg.2099
YjeE	NAD(P)HX epimerase	fig|6666666.65901.peg.2100
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65901.peg.1219
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65901.peg.1220
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65901.peg.941
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.65901.peg.1758
cAMP_signaling_in_bacteria	ElaA protein	fig|6666666.65901.peg.1421
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65901.peg.521
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65901.peg.1864
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65901.peg.1814
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65901.peg.1815
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65901.peg.1815
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.65901.peg.1559
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65901.peg.1816
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.482
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65901.peg.1895
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65901.peg.806
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65901.peg.688
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.87
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1228
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1290
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1807
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1837
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65901.peg.1838
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.160
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65901.peg.1756
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65901.peg.1367
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65901.peg.2086
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65901.peg.780
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65901.peg.958
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65901.peg.958
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65901.peg.779
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.65901.peg.1402
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.65901.peg.1402
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.731
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65901.peg.1298
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65901.peg.1296
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65901.peg.873
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65901.peg.744
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.65901.peg.451
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.65901.peg.741
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.65901.peg.497
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.65901.peg.504
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.65901.peg.496
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.65901.peg.741
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65901.peg.166
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65901.peg.526
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.65901.peg.497
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.65901.peg.504
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.65901.peg.496
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.65901.peg.526
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65901.peg.1307
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.65901.peg.947
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.65901.peg.1059
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.65901.peg.2045
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.65901.peg.183
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.65901.peg.613
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.65901.peg.303
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.65901.peg.304
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65901.peg.113
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65901.peg.928
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.65901.peg.1518
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.65901.peg.316
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.65901.peg.1225
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65901.peg.1991
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.65901.peg.917
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65901.peg.2004
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65901.peg.1350
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65901.peg.1699
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65901.peg.957
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65901.peg.873
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.65901.peg.1903
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65901.peg.1266
tRNAs	tRNA-Ala-CGC	fig|6666666.65901.rna.19
tRNAs	tRNA-Ala-GGC	fig|6666666.65901.rna.37
tRNAs	tRNA-Ala-GGC	fig|6666666.65901.rna.38
tRNAs	tRNA-Arg-ACG	fig|6666666.65901.rna.54
tRNAs	tRNA-Arg-ACG	fig|6666666.65901.rna.55
tRNAs	tRNA-Arg-CCG	fig|6666666.65901.rna.14
tRNAs	tRNA-Cys-GCA	fig|6666666.65901.rna.27
tRNAs	tRNA-Gly-CCC	fig|6666666.65901.rna.5
tRNAs	tRNA-Gly-GCC	fig|6666666.65901.rna.25
tRNAs	tRNA-Gly-GCC	fig|6666666.65901.rna.28
tRNAs	tRNA-Gly-GCC	fig|6666666.65901.rna.30
tRNAs	tRNA-Leu-CAA	fig|6666666.65901.rna.12
tRNAs	tRNA-Leu-CAG	fig|6666666.65901.rna.59
tRNAs	tRNA-Leu-GAG	fig|6666666.65901.rna.24
tRNAs	tRNA-Phe-GAA	fig|6666666.65901.rna.8
tRNAs	tRNA-Pro-CGG	fig|6666666.65901.rna.50
tRNAs	tRNA-Pro-GGG	fig|6666666.65901.rna.22
tRNAs	tRNA-Ser-CGA	fig|6666666.65901.rna.56
tRNAs	tRNA-Trp-CCA	fig|6666666.65901.rna.47
tRNAs	tRNA-Val-CAC	fig|6666666.65901.rna.31
tRNAs	tRNA-Val-GAC	fig|6666666.65901.rna.26
tRNAs	tRNA-Val-GAC	fig|6666666.65901.rna.29