16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.370
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.538
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.858
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.65902.peg.855
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.65902.peg.856
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.65902.peg.838
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65902.peg.545
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65902.peg.655
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65902.peg.135
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65902.peg.1452
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65902.peg.1802
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65902.peg.182
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.94
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.1827
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65902.peg.1676
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65902.peg.927
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65902.peg.1115
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65902.peg.1125
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65902.peg.138
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65902.peg.137
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65902.peg.870
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65902.peg.361
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65902.peg.1249
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65902.peg.2242
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.65902.peg.2215
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65902.peg.1138
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65902.peg.1136
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65902.peg.39
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65902.peg.2214
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.65902.peg.2217
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.65902.peg.168
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.65902.peg.166
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.65902.peg.1137
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.65902.peg.167
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.65902.peg.2216
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.65902.peg.1636
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.65902.peg.1384
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65902.peg.1477
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65902.peg.1199
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65902.peg.1769
Acetoin,_butanediol_metabolism	2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)	fig|6666666.65902.peg.1294
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65902.peg.899
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65902.peg.898
Acetoin,_butanediol_metabolism	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.65902.peg.1846
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65902.peg.899
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65902.peg.898
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65902.peg.351
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65902.peg.351
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.65902.peg.62
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.65902.peg.61
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65902.peg.1969
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65902.peg.405
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65902.peg.405
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.65902.peg.1402
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65902.peg.1749
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.581
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.1037
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65902.peg.2166
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65902.peg.2044
Alpha-acetolactate_operon	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.65902.peg.1846
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65902.peg.1747
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65902.peg.1748
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.65902.peg.1229
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65902.peg.10
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65902.peg.297
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65902.peg.393
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65902.peg.794
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65902.peg.1646
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.65902.peg.851
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65902.peg.465
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65902.peg.464
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65902.peg.430
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65902.peg.428
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65902.peg.429
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65902.peg.466
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65902.peg.467
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65902.peg.466
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65902.peg.1477
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65902.peg.431
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.65902.peg.465
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.65902.peg.464
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65902.peg.430
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65902.peg.428
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65902.peg.429
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.65902.peg.466
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.65902.peg.467
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.65902.peg.466
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65902.peg.1477
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65902.peg.431
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65902.peg.430
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.65902.peg.553
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65902.peg.431
Aromatic_amino_acid_degradation	Aromatic amino acid transport protein AroP	fig|6666666.65902.peg.1475
Aromatic_amino_acid_degradation	Aromatic amino acid transport protein AroP	fig|6666666.65902.peg.1948
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65902.peg.1474
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65902.peg.794
Arsenic_resistance	Arsenical resistance operon repressor	fig|6666666.65902.peg.796
Arsenic_resistance	Arsenical-resistance protein ACR3	fig|6666666.65902.peg.795
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65902.peg.880
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65902.peg.1213
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65902.peg.1212
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65902.peg.1210
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65902.peg.1211
Bacillus_subtilis_scratch_-_gjo	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65902.peg.218
Bacillus_subtilis_scratch_-_gjo	Ku domain protein	fig|6666666.65902.peg.221
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.667
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1370
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1694
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.2190
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65902.peg.1018
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.370
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.538
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.858
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.65902.peg.2260
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.65902.peg.1196
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65902.peg.537
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65902.peg.1193
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.65902.peg.158
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65902.peg.1197
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.65902.peg.855
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65902.peg.159
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65902.peg.1113
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.65902.peg.2005
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1187
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1896
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.65902.peg.1056
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.65902.peg.1840
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.65902.peg.432
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65902.peg.1978
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.65902.peg.856
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.667
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1370
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1694
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.2190
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.370
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.538
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.858
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.65902.peg.2260
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.65902.peg.1196
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65902.peg.537
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65902.peg.1193
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65902.peg.1197
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.65902.peg.855
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1187
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1896
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65902.peg.1897
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.65902.peg.1840
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.65902.peg.432
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65902.peg.1187
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65902.peg.1896
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.65902.peg.1897
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.65902.peg.1225
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65902.peg.1978
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.65902.peg.1979
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65902.peg.2155
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.65902.peg.476
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.65902.peg.2107
Bilin_Biosynthesis	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65902.peg.1861
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.65902.peg.637
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65902.peg.1789
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65902.peg.1788
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65902.peg.1790
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65902.peg.1787
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.65902.peg.384
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65902.peg.547
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65902.peg.2176
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65902.peg.2251
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.65902.peg.924
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65902.peg.1844
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.254
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.255
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.833
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.1303
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.1698
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.2017
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.65902.peg.2064
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65902.peg.2250
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65902.peg.2252
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.65902.peg.924
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65902.peg.1540
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65902.peg.244
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65902.peg.572
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65902.peg.571
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65902.peg.1280
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.65902.peg.899
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.65902.peg.898
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65902.peg.1749
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.65902.peg.901
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65902.peg.897
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.65902.peg.2073
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.65902.peg.346
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.65902.peg.2145
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.65902.peg.542
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.65902.peg.544
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.65902.peg.543
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65902.peg.2277
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.65902.peg.2278
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.65902.peg.2279
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65902.peg.2273
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.65902.peg.2021
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.65902.peg.2022
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65902.peg.886
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65902.peg.546
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65902.peg.641
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65902.peg.1243
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.65902.peg.1057
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65902.peg.803
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65902.peg.2137
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.65902.peg.1056
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65902.peg.1972
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65902.peg.1986
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.65902.peg.2172
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.65902.peg.2173
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65902.peg.2176
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65902.peg.2167
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.65902.peg.2169
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.65902.peg.2168
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.65902.peg.2170
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65902.peg.1789
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65902.peg.1788
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65902.peg.1790
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65902.peg.1785
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65902.peg.1787
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65902.peg.1184
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65902.peg.1042
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.65902.peg.1601
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65902.peg.1540
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.65902.peg.2072
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65902.peg.1984
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65902.peg.1968
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.65902.peg.1822
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65902.peg.2237
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65902.peg.612
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1152
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1557
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.65902.peg.1991
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65902.peg.148
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65902.peg.148
CBSS-279010.5.peg.587	Lactam utilization protein LamB	fig|6666666.65902.peg.147
CBSS-279010.5.peg.587	hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	fig|6666666.65902.peg.449
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.65902.peg.1192
CBSS-291331.3.peg.3674	S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase	fig|6666666.65902.peg.1631
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65902.peg.371
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65902.peg.1921
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.65902.peg.1994
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.65902.peg.1995
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65902.peg.1190
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.65902.peg.1188
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.65902.peg.1189
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65902.peg.794
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.65902.peg.1741
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65902.peg.781
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65902.peg.1899
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65902.peg.10
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65902.peg.2113
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65902.peg.1755
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65902.peg.1757
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65902.peg.547
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65902.peg.2176
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65902.peg.405
CBSS-320388.3.peg.3759	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65902.peg.1878
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65902.peg.405
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65902.peg.517
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65902.peg.574
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65902.peg.614
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65902.peg.739
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.65902.peg.1992
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65902.peg.842
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65902.peg.1603
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.65902.peg.2182
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65902.peg.2183
CBSS-336982.3.peg.1011	FIG019045: long form Mg-chelase associated protein with vWA domain	fig|6666666.65902.peg.1321
CBSS-336982.3.peg.1011	Magnesium chelatase, subunit ChlI (EC 6.6.1.1)	fig|6666666.65902.peg.1320
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65902.peg.446
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65902.peg.1283
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.65902.peg.2066
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65902.peg.2141
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65902.peg.1282
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65902.peg.1184
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65902.peg.638
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.65902.peg.1071
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.65902.peg.544
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.65902.peg.824
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65902.peg.895
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65902.peg.173
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65902.peg.688
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.65902.peg.1170
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65902.peg.2088
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.581
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.1037
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.65902.peg.1916
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.65902.peg.1544
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.65902.peg.1181
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.65902.peg.1182
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.65902.peg.1183
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.65902.peg.1180
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.65902.peg.1179
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.65902.peg.607
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.65902.peg.606
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.65902.peg.605
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65902.peg.604
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65902.peg.1295
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.65902.peg.1637
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65902.peg.1297
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65902.peg.1297
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.65902.peg.812
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.581
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.1037
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65902.peg.919
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65902.peg.1015
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65902.peg.739
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65902.peg.1742
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65902.peg.2197
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65902.peg.457
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65902.peg.2198
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.65902.peg.662
CRISPRs	CRISPR-associated helicase Cas3, protein	fig|6666666.65902.peg.1434
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.65902.peg.104
CRISPRs	CRISPR-associated protein, Cse1 family	fig|6666666.65902.peg.1433
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65902.peg.1363
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65902.peg.1810
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65902.peg.2185
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65902.peg.1863
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65902.peg.2184
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65902.peg.1231
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65902.peg.2195
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.65902.peg.2177
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65902.peg.2183
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.65902.peg.1661
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.65902.peg.1633
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65902.peg.419
Carbon_Starvation	Carbon starvation protein A	fig|6666666.65902.peg.1278
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65902.peg.453
Catechol_branch_of_beta-ketoadipate_pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.65902.peg.2009
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.667
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1370
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1694
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.2190
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65902.peg.1018
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65902.peg.1017
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1956
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1959
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65902.peg.2070
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.65902.peg.2221
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65902.peg.1984
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.65902.peg.988
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.65902.peg.1198
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.65902.peg.1196
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65902.peg.1197
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.65902.peg.1200
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.65902.peg.1201
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.65902.peg.1202
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65902.peg.1199
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65902.peg.1195
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65902.peg.339
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65902.peg.1555
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65902.peg.685
Chloroaromatic_degradation_pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.65902.peg.2009
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Glycine betaine ABC transport system permease protein	fig|6666666.65902.peg.995
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.65902.peg.997
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)	fig|6666666.65902.peg.996
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.65902.peg.994
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65902.peg.966
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65902.peg.2051
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65902.peg.1213
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65902.peg.1214
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65902.peg.1215
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65902.peg.1212
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65902.peg.2055
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.65902.peg.1285
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65902.peg.2050
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65902.peg.2050
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65902.peg.1212
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65902.peg.1210
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65902.peg.1211
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65902.peg.289
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65902.peg.2157
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65902.peg.2156
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65902.peg.1378
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65902.peg.622
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65902.peg.689
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65902.peg.2154
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65902.peg.336
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65902.peg.2152
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65902.peg.2155
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65902.peg.1680
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.65902.peg.1688
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.65902.peg.1692
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.65902.peg.1689
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65902.peg.1686
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65902.peg.1685
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65902.peg.1687
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.65902.peg.1690
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.65902.peg.1691
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65902.peg.2149
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.65902.peg.2151
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65902.peg.2152
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.65902.peg.1750
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.65902.peg.1251
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65902.peg.895
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.65902.peg.2220
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65902.peg.897
Coenzyme_A_Biosynthesis	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65902.peg.905
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65902.peg.906
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.65902.peg.871
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65902.peg.2237
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65902.peg.1042
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.65902.peg.440
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.65902.peg.931
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65902.peg.289
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65902.peg.2157
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65902.peg.2156
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65902.peg.1378
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65902.peg.2154
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65902.peg.2152
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65902.peg.2155
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65902.peg.1146
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65902.peg.195
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.65902.peg.603
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.345
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.778
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.1093
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.1174
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.1780
Copper_Transport_System	Repressor CsoR of the copZA operon	fig|6666666.65902.peg.1175
Copper_homeostasis	Copper chaperone	fig|6666666.65902.peg.779
Copper_homeostasis	Copper resistance protein D	fig|6666666.65902.peg.214
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.345
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.778
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.1093
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.1174
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65902.peg.1780
Copper_homeostasis	Multicopper oxidase	fig|6666666.65902.peg.341
Copper_homeostasis	Multicopper oxidase	fig|6666666.65902.peg.1488
Copper_homeostasis	Multicopper oxidase	fig|6666666.65902.peg.1943
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.65902.peg.887
Cysteine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65902.peg.1227
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65902.peg.194
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65902.peg.518
Cysteine_Biosynthesis	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65902.peg.400
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65902.peg.195
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65902.peg.402
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65902.peg.401
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.65902.peg.404
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65902.peg.1164
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65902.peg.2044
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65902.peg.2044
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65902.peg.1635
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.65902.peg.1055
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.65902.peg.683
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.65902.peg.1140
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65902.peg.1231
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65902.peg.638
DNA_Repair_Base_Excision	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65902.peg.218
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.65902.peg.1170
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.65902.peg.2224
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65902.peg.842
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	fig|6666666.65902.peg.1853
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.65902.peg.603
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65902.peg.693
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65902.peg.1973
DNA_Repair_Base_Excision	Ku domain protein	fig|6666666.65902.peg.221
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.65902.peg.2241
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65902.peg.1881
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65902.peg.1886
DNA_ligases	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65902.peg.218
DNA_ligases	Ku domain protein	fig|6666666.65902.peg.221
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.65902.peg.315
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.65902.peg.314
DNA_processing_cluster	Recombination protein RecR	fig|6666666.65902.peg.26
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.65902.peg.2204
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.65902.peg.197
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.65902.peg.2052
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.65902.peg.2210
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.65902.peg.2189
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65902.peg.886
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.65902.peg.1260
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.65902.peg.1206
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.65902.peg.1357
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.65902.peg.889
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.65902.peg.1181
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65902.peg.454
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65902.peg.926
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65902.peg.1360
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65902.peg.1361
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.65902.peg.143
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65902.peg.1163
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65902.peg.2088
DNA_repair,_bacterial	RecA protein	fig|6666666.65902.peg.2247
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65902.peg.747
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65902.peg.213
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65902.peg.225
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.65902.peg.2099
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.65902.peg.1365
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.65902.peg.55
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.65902.peg.775
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.65902.peg.1888
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.65902.peg.1057
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.65902.peg.2247
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.65902.peg.26
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65902.peg.213
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65902.peg.225
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.65902.peg.2247
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65902.peg.747
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65902.peg.688
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.65902.peg.712
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.65902.peg.999
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.65902.peg.2247
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.65902.peg.2246
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65902.peg.1987
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.65902.peg.1890
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65902.peg.1881
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65902.peg.1886
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.65902.peg.1889
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.65902.peg.1888
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.65902.peg.1263
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.65902.peg.1880
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65902.peg.2070
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.65902.peg.1887
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.65902.peg.1977
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1152
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1557
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65902.peg.1881
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65902.peg.1886
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65902.peg.1158
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.65902.peg.962
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65902.peg.138
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.65902.peg.1157
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.65902.peg.1847
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.65902.peg.1848
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.65902.peg.1160
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65902.peg.138
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.65902.peg.963
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.65902.peg.957
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.65902.peg.958
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.65902.peg.959
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65902.peg.137
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.65902.peg.1820
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65902.peg.1947
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.65902.peg.810
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.65902.peg.807
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.65902.peg.808
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.65902.peg.809
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.65902.peg.593
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.65902.peg.594
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.65902.peg.1807
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65902.peg.806
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.65902.peg.811
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65902.peg.811
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.65902.peg.1824
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.65902.peg.414
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65902.peg.441
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65902.peg.692
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.65902.peg.1140
Dihydroxyacetone_kinases	Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29)	fig|6666666.65902.peg.1744
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65902.peg.47
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65902.peg.1776
EC699-706	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65902.peg.148
EC699-706	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65902.peg.148
EC699-706	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.65902.peg.999
EC699-706	Lactam utilization protein LamB	fig|6666666.65902.peg.147
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65902.peg.2251
ECF_class_transporters	ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65902.peg.56
ECF_class_transporters	ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65902.peg.56
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65902.peg.504
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65902.peg.2250
ECF_class_transporters	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65902.peg.1738
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65902.peg.505
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65902.peg.2252
ECF_class_transporters	Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter	fig|6666666.65902.peg.1739
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65902.peg.170
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65902.peg.2181
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.65902.peg.669
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.65902.peg.1055
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65902.peg.2179
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65902.peg.2185
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.65902.peg.2180
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65902.peg.2184
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65902.peg.1763
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65902.peg.823
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65902.peg.2053
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.65902.peg.1822
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65902.peg.1821
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65902.peg.1968
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65902.peg.831
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65902.peg.1842
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65902.peg.831
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65902.peg.1842
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65902.peg.149
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65902.peg.1835
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65902.peg.149
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65902.peg.1835
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)	fig|6666666.65902.peg.1963
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.65902.peg.832
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65902.peg.1822
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65902.peg.701
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65902.peg.1821
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.65902.peg.1822
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65902.peg.1452
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65902.peg.1802
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.65902.peg.701
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65902.peg.1821
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain	fig|6666666.65902.peg.242
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport permease EfeU	fig|6666666.65902.peg.241
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport peroxidase EfeB	fig|6666666.65902.peg.243
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport peroxidase EfeB	fig|6666666.65902.peg.1142
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.65902.peg.824
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.370
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.538
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65902.peg.858
Flavohaemoglobin	ABC-type Fe3+-siderophore transport system, permease 2 component	fig|6666666.65902.peg.1611
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65902.peg.1022
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65902.peg.135
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65902.peg.966
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65902.peg.2051
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65902.peg.182
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.65902.peg.2015
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65902.peg.1021
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65902.peg.1020
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.65902.peg.2015
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65902.peg.1019
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65902.peg.2050
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65902.peg.2050
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.65902.peg.181
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.65902.peg.2266
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65902.peg.1022
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65902.peg.1018
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65902.peg.1021
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65902.peg.1020
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.65902.peg.1023
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65902.peg.1019
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65902.peg.1017
Folate_biosynthesis_cluster	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65902.peg.905
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65902.peg.906
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.65902.peg.1127
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.65902.peg.1935
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Sucrose-6-phosphate hydrolase (EC 3.2.1.26)	fig|6666666.65902.peg.1484
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.65902.peg.745
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.65902.peg.745
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.65902.peg.745
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65902.peg.911
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.65902.peg.2178
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.65902.peg.746
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.65902.peg.1284
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.65902.peg.1957
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65902.peg.1754
Glutamate_and_Aspartate_uptake_in_Bacteria	Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4)	fig|6666666.65902.peg.1529
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.65902.peg.304
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65902.peg.32
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65902.peg.1754
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65902.peg.1042
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.65902.peg.1674
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65902.peg.2105
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.65902.peg.1496
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65902.peg.297
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65902.peg.393
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65902.peg.1207
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65902.peg.32
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65902.peg.297
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65902.peg.393
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65902.peg.2092
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65902.peg.2141
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65902.peg.2092
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.65902.peg.493
Glutathione_analogs:_mycothiol	Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	fig|6666666.65902.peg.1696
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.65902.peg.251
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.65902.peg.1671
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.65902.peg.874
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.65902.peg.1466
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.65902.peg.374
Glutathione_analogs:_mycothiol	Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR	fig|6666666.65902.peg.1695
Glutathione_analogs:_mycothiol	S-nitrosomycothiol reductase MscR	fig|6666666.65902.peg.1696
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65902.peg.2044
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65902.peg.2053
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65902.peg.870
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65902.peg.1742
Glycine_and_Serine_Utilization	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65902.peg.1227
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65902.peg.2026
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65902.peg.2044
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.65902.peg.1741
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65902.peg.1743
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65902.peg.2143
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65902.peg.939
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65902.peg.22
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65902.peg.1772
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65902.peg.870
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65902.peg.563
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65902.peg.976
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65902.peg.1450
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65902.peg.1603
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65902.peg.1742
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.94
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.1827
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.65902.peg.1741
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65902.peg.1743
Glycine_cleavage_system	Sodium/glycine symporter GlyP	fig|6666666.65902.peg.2084
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65902.peg.781
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65902.peg.1899
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65902.peg.1681
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65902.peg.1900
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65902.peg.576
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65902.peg.1304
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.65902.peg.1721
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65902.peg.2065
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65902.peg.2048
Glycogen_metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.65902.peg.1720
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65902.peg.545
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65902.peg.1164
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.65902.peg.669
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65902.peg.1363
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65902.peg.1810
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65902.peg.690
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65902.peg.2185
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65902.peg.1863
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65902.peg.2184
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65902.peg.1763
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65902.peg.823
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65902.peg.2053
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65902.peg.2183
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65902.peg.1164
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.65902.peg.669
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65902.peg.1363
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65902.peg.690
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65902.peg.2184
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65902.peg.1763
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65902.peg.2053
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65902.peg.2183
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.65902.peg.1057
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.65902.peg.1056
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65902.peg.1061
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65902.peg.1295
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.65902.peg.1637
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65902.peg.1297
Glycyl-tRNA_synthetase_containing_cluster	Transcriptional regulator in glycyl-tRNA synthetase containing cluster	fig|6666666.65902.peg.1060
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.65902.peg.1059
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65902.peg.208
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65902.peg.940
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65902.peg.2013
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65902.peg.647
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65902.peg.1299
GroEL_GroES	Chaperone protein DnaK	fig|6666666.65902.peg.645
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65902.peg.490
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65902.peg.1410
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.65902.peg.1409
GroEL_GroES	Heat shock protein GrpE	fig|6666666.65902.peg.646
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.65902.peg.1300
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65902.peg.647
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65902.peg.1299
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.65902.peg.645
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.65902.peg.646
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.65902.peg.1300
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.65902.peg.648
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65902.peg.2109
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65902.peg.2108
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65902.peg.1298
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65902.peg.2070
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.65902.peg.2042
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.65902.peg.838
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.65902.peg.157
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.65902.peg.61
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.65902.peg.119
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.65902.peg.1925
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, ATPase component HmuV	fig|6666666.65902.peg.1857
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT	fig|6666666.65902.peg.1859
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, permease protein HmuU	fig|6666666.65902.peg.1858
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65902.peg.1861
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.65902.peg.164
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.65902.peg.1458
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system, sensory histidine kinase HrrS	fig|6666666.65902.peg.165
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron-dependent repressor IdeR/DtxR	fig|6666666.65902.peg.636
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.65902.peg.1492
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.65902.peg.1522
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.65902.peg.1525
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.65902.peg.408
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65902.peg.1785
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65902.peg.1774
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65902.peg.1287
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.65902.peg.377
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.65902.peg.1775
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.65902.peg.1777
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.65902.peg.1782
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.65902.peg.1781
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65902.peg.47
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65902.peg.1776
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.65902.peg.1776
Hfl_operon	GTP-binding protein HflX	fig|6666666.65902.peg.743
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65902.peg.494
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65902.peg.1764
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65902.peg.1765
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65902.peg.497
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65902.peg.496
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65902.peg.495
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.65902.peg.498
Histidine_Degradation	Formiminoglutamase (EC 3.5.3.8)	fig|6666666.65902.peg.532
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.65902.peg.530
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.65902.peg.1110
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.65902.peg.1111
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65902.peg.531
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65902.peg.573
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65902.peg.820
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65902.peg.2109
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.65902.peg.1888
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.65902.peg.1263
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.65902.peg.1468
Inorganic_Sulfur_Assimilation	Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	fig|6666666.65902.peg.400
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65902.peg.1054
Inorganic_Sulfur_Assimilation	Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	fig|6666666.65902.peg.398
Inorganic_Sulfur_Assimilation	Ferredoxin-like protein involved in electron transfer	fig|6666666.65902.peg.399
Inorganic_Sulfur_Assimilation	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65902.peg.400
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65902.peg.402
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65902.peg.401
Inorganic_Sulfur_Assimilation	Sulfate transporter, CysZ-type	fig|6666666.65902.peg.404
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65902.peg.142
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65902.peg.2076
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1152
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1557
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65902.peg.718
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65902.peg.1297
Inteins	Translation initiation factor 2	fig|6666666.65902.peg.2279
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.581
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.1037
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65902.peg.2166
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.65902.peg.967
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.65902.peg.965
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65902.peg.2167
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.65902.peg.2169
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.65902.peg.2168
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.65902.peg.2170
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.65902.peg.2164
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.65902.peg.2165
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.65902.peg.1752
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.65902.peg.1982
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.65902.peg.1981
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65902.peg.618
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65902.peg.546
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.65902.peg.1608
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.65902.peg.954
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.65902.peg.88
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65902.peg.89
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65902.peg.953
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.65902.peg.86
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.65902.peg.87
Lactate_utilization	L-lactate permease	fig|6666666.65902.peg.616
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.65902.peg.524
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.65902.peg.617
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65902.peg.618
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.65902.peg.619
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.635
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.666
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.1791
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65902.peg.396
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.635
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.666
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.1791
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.65902.peg.662
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65902.peg.244
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65902.peg.572
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65902.peg.571
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65902.peg.1280
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65902.peg.1749
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65902.peg.1749
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65902.peg.1745
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.94
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.1827
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65902.peg.1626
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.65902.peg.1625
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65902.peg.1627
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65902.peg.1693
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.65902.peg.1628
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.65902.peg.293
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65902.peg.1740
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.65902.peg.293
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65902.peg.1740
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65902.peg.173
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.65902.peg.2054
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.65902.peg.585
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.65902.peg.585
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65902.peg.1473
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65902.peg.1476
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65902.peg.1600
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.65902.peg.1601
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65902.peg.517
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65902.peg.574
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65902.peg.614
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65902.peg.739
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65902.peg.1510
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65902.peg.1933
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65902.peg.2047
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65902.peg.2226
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.65902.peg.1469
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65902.peg.1477
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65902.peg.351
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.65902.peg.62
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.65902.peg.61
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65902.peg.1969
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65902.peg.1295
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.65902.peg.1637
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.65902.peg.1633
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.65902.peg.76
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65902.peg.1304
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65902.peg.2048
Maltose_and_Maltodextrin_Utilization	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.65902.peg.2068
Maltose_and_Maltodextrin_Utilization	Neopullulanase (EC 3.2.1.135)	fig|6666666.65902.peg.1498
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65902.peg.911
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.65902.peg.1553
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.65902.peg.1547
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65902.peg.1549
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65902.peg.1648
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65902.peg.1648
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65902.peg.1648
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.65902.peg.1656
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.65902.peg.1663
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65902.peg.1659
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.65902.peg.50
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65902.peg.1648
Mercuric_reductase	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65902.peg.768
Mercury_resistance_operon	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.65902.peg.768
Mercury_resistance_operon	Mercuric resistance operon regulatory protein	fig|6666666.65902.peg.767
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65902.peg.919
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65902.peg.1015
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.65902.peg.637
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65902.peg.859
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65902.peg.860
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65902.peg.1333
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65902.peg.655
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.65902.peg.654
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.65902.peg.1132
Methionine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65902.peg.1227
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65902.peg.194
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65902.peg.518
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.65902.peg.1122
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65902.peg.613
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65902.peg.612
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.65902.peg.308
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.65902.peg.309
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65902.peg.306
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65902.peg.307
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.65902.peg.1119
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.65902.peg.1119
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65902.peg.405
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65902.peg.2201
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65902.peg.880
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65902.peg.195
Methionine_Degradation	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65902.peg.1227
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.65902.peg.308
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.65902.peg.309
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65902.peg.306
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65902.peg.307
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65902.peg.405
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65902.peg.2201
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65902.peg.880
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65902.peg.405
Methylcitrate_cycle	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.65902.peg.1829
Methylcitrate_cycle	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.65902.peg.1831
Methylcitrate_cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65902.peg.208
Methylcitrate_cycle	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.65902.peg.1830
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65902.peg.644
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65902.peg.951
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65902.peg.644
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65902.peg.951
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65902.peg.2141
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65902.peg.2245
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65902.peg.1659
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65902.peg.488
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65902.peg.1591
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65902.peg.488
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65902.peg.1591
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65902.peg.487
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65902.peg.1592
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65902.peg.1593
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65902.peg.18
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65902.peg.1594
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65902.peg.17
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65902.peg.1595
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65902.peg.1596
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.65902.peg.2077
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65902.peg.919
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65902.peg.1015
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65902.peg.1898
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65902.peg.949
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65902.peg.947
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.65902.peg.1437
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.65902.peg.1438
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.65902.peg.1439
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.65902.peg.1441
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65902.peg.1164
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65902.peg.685
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.635
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.666
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.1791
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65902.peg.1184
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.65902.peg.2256
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.65902.peg.2256
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.65902.peg.1180
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.65902.peg.2090
NAD_and_NADP_cofactor_biosynthesis_global	Niacin transporter NiaP	fig|6666666.65902.peg.777
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65902.peg.2115
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65902.peg.2100
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.65902.peg.2030
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.65902.peg.985
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.65902.peg.986
Niacin-Choline_transport_and_metabolism	Niacin transporter NiaP	fig|6666666.65902.peg.777
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65902.peg.2115
Nitric_oxide_synthase	putative cytochrome P450 hydroxylase	fig|6666666.65902.peg.1168
Nonhomologous_End-Joining_in_Bacteria	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65902.peg.218
Nonhomologous_End-Joining_in_Bacteria	Ku domain protein	fig|6666666.65902.peg.221
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65902.peg.2002
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65902.peg.817
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65902.peg.2004
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65902.peg.41
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65902.peg.445
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65902.peg.1359
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.65902.peg.672
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65902.peg.1184
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65902.peg.820
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.65902.peg.601
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.65902.peg.702
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.65902.peg.713
NusA-TFII_Cluster	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65902.peg.2280
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.65902.peg.2278
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.65902.peg.2281
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.65902.peg.2279
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65902.peg.655
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65902.peg.135
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65902.peg.1676
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65902.peg.1125
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65902.peg.1125
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.65902.peg.1843
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.65902.peg.585
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.65902.peg.1100
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.65902.peg.1059
Oxygen_and_light_sensor_PpaA-PpsR	Heme oxygenase (EC 1.14.99.3)	fig|6666666.65902.peg.1861
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65902.peg.1635
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65902.peg.2181
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65902.peg.2179
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65902.peg.1231
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65902.peg.1947
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65902.peg.2195
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.65902.peg.2178
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.65902.peg.2177
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65902.peg.1101
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65902.peg.378
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.65902.peg.1902
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65902.peg.1788
Persister_Cells	Cell division inhibitor	fig|6666666.65902.peg.812
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.65902.peg.1718
Phage_replication	DNA helicase, phage-associated	fig|6666666.65902.peg.1513
Phage_replication	DNA helicase, phage-associated	fig|6666666.65902.peg.1515
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65902.peg.142
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65902.peg.2076
Phage_replication	DNA primase/helicase, phage-associated	fig|6666666.65902.peg.1511
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.65902.peg.1883
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.65902.peg.1882
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65902.peg.622
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.65902.peg.1949
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.65902.peg.689
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.65902.peg.336
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65902.peg.494
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65902.peg.1764
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65902.peg.1765
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.65902.peg.179
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65902.peg.664
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65902.peg.1767
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.65902.peg.1014
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65902.peg.494
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65902.peg.1764
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65902.peg.1765
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65902.peg.1297
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65902.peg.1297
Phosphate_metabolism	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65902.peg.497
Phosphate_metabolism	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65902.peg.496
Phosphate_metabolism	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65902.peg.495
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.65902.peg.498
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.65902.peg.977
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65902.peg.1763
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.65902.peg.1312
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.65902.peg.2032
Photorespiration_(oxidative_C2_cycle)	2-oxoglutarate/malate translocator	fig|6666666.65902.peg.219
Photorespiration_(oxidative_C2_cycle)	2-oxoglutarate/malate translocator	fig|6666666.65902.peg.220
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65902.peg.1742
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.65902.peg.1843
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.94
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.1827
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65902.peg.2044
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.65902.peg.1741
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65902.peg.1743
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.65902.peg.545
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65902.peg.870
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1187
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1896
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65902.peg.1897
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65902.peg.2105
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.65902.peg.2269
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65902.peg.112
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65902.peg.351
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.65902.peg.351
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65902.peg.1969
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65902.peg.664
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65902.peg.1767
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65902.peg.823
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.65902.peg.15
Polysaccharide_deacetylases	Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)	fig|6666666.65902.peg.2200
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.667
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1370
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.1694
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65902.peg.2190
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.65902.peg.665
Potassium_homeostasis	Glutathione-regulated potassium-efflux system protein KefC	fig|6666666.65902.peg.846
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.65902.peg.133
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.65902.peg.321
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.65902.peg.1155
Potassium_homeostasis	Potassium channel protein	fig|6666666.65902.peg.714
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.65902.peg.1226
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.65902.peg.160
Proline,_4-hydroxyproline_uptake_and_utilization	L-Proline/Glycine betaine transporter ProP	fig|6666666.65902.peg.1951
Proline,_4-hydroxyproline_uptake_and_utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65902.peg.590
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.65902.peg.2043
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.65902.peg.2212
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.65902.peg.1388
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.65902.peg.2027
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.65902.peg.2025
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.65902.peg.32
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65902.peg.1769
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65902.peg.1821
Propionate-CoA_to_Succinate_Module	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.65902.peg.1829
Propionate-CoA_to_Succinate_Module	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.65902.peg.1831
Propionate-CoA_to_Succinate_Module	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65902.peg.208
Propionate-CoA_to_Succinate_Module	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65902.peg.208
Propionate-CoA_to_Succinate_Module	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.65902.peg.1830
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65902.peg.1680
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65902.peg.1686
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65902.peg.1685
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65902.peg.1687
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.65902.peg.1843
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65902.peg.647
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65902.peg.1299
Protein_chaperones	Chaperone protein DnaK	fig|6666666.65902.peg.645
Protein_chaperones	ClpB protein	fig|6666666.65902.peg.1801
Protein_chaperones	Heat shock protein GrpE	fig|6666666.65902.peg.646
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.65902.peg.648
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65902.peg.546
Protein_deglycation	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65902.peg.1877
Protein_deglycation	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65902.peg.1878
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.65902.peg.2089
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.65902.peg.2158
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.65902.peg.1308
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.65902.peg.2011
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.65902.peg.2101
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65902.peg.2006
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65902.peg.2007
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.65902.peg.883
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.65902.peg.1801
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.65902.peg.889
Proteorhodopsin	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65902.peg.1877
Proteorhodopsin	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65902.peg.1878
Protocatechuate_branch_of_beta-ketoadipate_pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.65902.peg.2009
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.65902.peg.1684
Purine_Utilization	Cytosine/purine/uracil/thiamine/allantoin permease family protein	fig|6666666.65902.peg.526
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.65902.peg.935
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65902.peg.1322
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65902.peg.2138
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.65902.peg.302
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65902.peg.2136
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.65902.peg.1922
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65902.peg.1158
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.65902.peg.1814
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65902.peg.95
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.65902.peg.804
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65902.peg.1017
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65902.peg.1415
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65902.peg.1416
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65902.peg.478
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65902.peg.1737
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65902.peg.2271
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.65902.peg.2018
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65902.peg.1360
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65902.peg.1361
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65902.peg.1415
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65902.peg.1416
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65902.peg.1101
Pyrene_degradation	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.65902.peg.2009
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65902.peg.817
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65902.peg.2026
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65902.peg.2185
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65902.peg.939
Pyridoxin_(Vitamin_B6)_Biosynthesis	Predicted transcriptional regulator of pyridoxine metabolism	fig|6666666.65902.peg.1682
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.65902.peg.1293
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.65902.peg.512
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.65902.peg.1683
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.65902.peg.1402
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65902.peg.1749
Pyruvate_Alanine_Serine_Interconversions	D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	fig|6666666.65902.peg.631
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65902.peg.2143
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65902.peg.563
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65902.peg.976
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65902.peg.1450
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.65902.peg.1428
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.65902.peg.1506
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.65902.peg.1832
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65902.peg.2053
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65902.peg.1822
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.65902.peg.1976
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65902.peg.644
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65902.peg.951
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65902.peg.305
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65902.peg.2288
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65902.peg.1821
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.65902.peg.650
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65902.peg.1019
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65902.peg.478
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65902.peg.1737
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65902.peg.2271
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.65902.peg.1316
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.65902.peg.77
Queuosine-Archaeosine_Biosynthesis	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65902.peg.1738
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.65902.peg.78
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.65902.peg.627
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65902.peg.2157
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65902.peg.1036
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65902.peg.2175
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65902.peg.2040
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.65902.peg.818
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-)	fig|6666666.65902.peg.2290
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.65902.peg.1147
RNA_methylation	FIG011178: rRNA methylase	fig|6666666.65902.peg.91
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.65902.peg.1483
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.65902.peg.2000
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65902.peg.1298
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65902.peg.1895
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.65902.peg.1983
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.65902.peg.1429
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.65902.peg.1173
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1187
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65902.peg.1896
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65902.peg.1897
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65902.peg.1895
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.65902.peg.1894
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.65902.peg.1891
RNA_modification_cluster	Protein YidD	fig|6666666.65902.peg.1893
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65902.peg.1892
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.65902.peg.1915
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65902.peg.949
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65902.peg.947
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65902.peg.803
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.65902.peg.397
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.65902.peg.2121
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65902.peg.2277
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.65902.peg.2020
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.65902.peg.1026
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65902.peg.1972
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65902.peg.206
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65902.peg.1190
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.65902.peg.172
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65902.peg.1913
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65902.peg.2273
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.65902.peg.1392
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.65902.peg.1391
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.65902.peg.143
RecA_and_RecX	RecA protein	fig|6666666.65902.peg.2247
RecA_and_RecX	Regulatory protein RecX	fig|6666666.65902.peg.2246
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65902.peg.1898
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65902.peg.2185
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65902.peg.305
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.65902.peg.2288
Redox-dependent_regulation_of_nucleus_processes	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65902.peg.1863
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65902.peg.2115
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65902.peg.2100
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.65902.peg.684
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65902.peg.1881
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65902.peg.1886
Respiratory_dehydrogenases_1	D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	fig|6666666.65902.peg.631
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65902.peg.1632
Respiratory_dehydrogenases_1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65902.peg.590
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.65902.peg.479
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65902.peg.422
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.635
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.666
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65902.peg.1791
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65902.peg.419
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65902.peg.419
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65902.peg.417
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65902.peg.2192
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65902.peg.2194
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65902.peg.2191
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65902.peg.2194
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65902.peg.2272
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65902.peg.2192
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65902.peg.2272
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65902.peg.2193
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65902.peg.2192
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65902.peg.2194
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65902.peg.2191
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.65902.peg.2256
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65902.peg.2194
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65902.peg.2192
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65902.peg.1632
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65902.peg.806
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65902.peg.2193
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65902.peg.2195
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65902.peg.2242
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.65902.peg.2160
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.65902.peg.1988
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65902.peg.1987
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65902.peg.1987
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65902.peg.2092
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65902.peg.1502
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65902.peg.2094
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65902.peg.1501
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65902.peg.2096
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.65902.peg.749
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65902.peg.1503
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65902.peg.2093
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.65902.peg.1437
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.65902.peg.848
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.65902.peg.1929
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.65902.peg.954
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.65902.peg.88
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.65902.peg.1904
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.65902.peg.1940
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.65902.peg.1927
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.65902.peg.721
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.65902.peg.1914
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.65902.peg.1930
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.65902.peg.1985
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65902.peg.89
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.65902.peg.2021
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.65902.peg.723
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.65902.peg.726
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.65902.peg.1939
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.65902.peg.1952
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.65902.peg.2022
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.65902.peg.326
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.65902.peg.720
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.65902.peg.725
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.65902.peg.1928
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.65902.peg.324
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.65902.peg.323
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.65902.peg.327
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.65902.peg.327
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.65902.peg.1891
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.65902.peg.2202
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.65902.peg.2091
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.65902.peg.728
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.65902.peg.727
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.65902.peg.1938
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.65902.peg.1931
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65902.peg.953
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.65902.peg.226
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.65902.peg.1539
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.65902.peg.1998
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.65902.peg.1994
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.65902.peg.1995
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.65902.peg.2129
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.65902.peg.2130
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.65902.peg.2131
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.65902.peg.1284
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.65902.peg.1957
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.65902.peg.48
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.65902.peg.432
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65902.peg.655
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65902.peg.135
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65902.peg.208
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65902.peg.940
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.65902.peg.669
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65902.peg.1676
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65902.peg.2044
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65902.peg.2013
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65902.peg.1125
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65902.peg.1125
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65902.peg.831
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65902.peg.1842
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65902.peg.870
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65902.peg.360
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65902.peg.361
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65902.peg.2026
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65902.peg.939
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65902.peg.22
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65902.peg.1772
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65902.peg.22
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65902.peg.1772
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65902.peg.870
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65902.peg.173
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65902.peg.39
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65902.peg.2214
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65902.peg.718
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65902.peg.1946
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65902.peg.1946
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65902.peg.1396
Sialic_Acid_Metabolism	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.65902.peg.662
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.65902.peg.637
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65902.peg.173
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65902.peg.1986
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.65902.peg.388
Sortase	Sortase A, LPXTG specific	fig|6666666.65902.peg.1492
Sortase	Sortase A, LPXTG specific	fig|6666666.65902.peg.1522
Sortase	Sortase A, LPXTG specific	fig|6666666.65902.peg.1525
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1956
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1959
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65902.peg.95
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65902.peg.490
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65902.peg.1410
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65902.peg.306
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65902.peg.307
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.65902.peg.329
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.65902.peg.157
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.65902.peg.2169
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65902.peg.2137
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.65902.peg.362
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.65902.peg.74
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65902.peg.360
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65902.peg.361
Sucrose_utilization	Sucrose-6-phosphate hydrolase (EC 3.2.1.26)	fig|6666666.65902.peg.1484
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65902.peg.1788
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65902.peg.1729
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65902.peg.208
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65902.peg.940
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.94
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65902.peg.1827
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65902.peg.1729
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.65902.peg.862
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65902.peg.927
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65902.peg.1115
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.65902.peg.2013
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.65902.peg.376
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65902.peg.360
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65902.peg.361
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65902.peg.1333
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.65902.peg.2097
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65902.peg.1755
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65902.peg.1757
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.65902.peg.1439
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.65902.peg.1439
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65902.peg.817
Thiamin_biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.65902.peg.1248
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65902.peg.505
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.65902.peg.1247
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65902.peg.1245
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65902.peg.1249
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65902.peg.2242
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.65902.peg.1246
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65902.peg.170
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.65902.peg.586
Thioredoxin-disulfide_reductase	Alkylhydroperoxidase protein D	fig|6666666.65902.peg.587
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.65902.peg.585
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65902.peg.2113
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65902.peg.1681
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65902.peg.1900
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.65902.peg.1822
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65902.peg.1821
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65902.peg.563
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65902.peg.976
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65902.peg.1450
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65902.peg.1042
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65902.peg.1600
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.65902.peg.1601
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65902.peg.613
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65902.peg.612
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.65902.peg.262
Threonine_degradation	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.65902.peg.2073
Threonine_degradation	Threonine dehydrogenase and related Zn-dependent dehydrogenases	fig|6666666.65902.peg.347
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.65902.peg.373
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.65902.peg.772
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.65902.peg.1080
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.65902.peg.1081
Toxin-antitoxin_replicon_stabilization_systems	ParD protein (antitoxin to ParE)	fig|6666666.65902.peg.521
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.65902.peg.1086
Transcription_factors_bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65902.peg.2280
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65902.peg.1984
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.65902.peg.87
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.65902.peg.876
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.65902.peg.1329
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.65902.peg.2281
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.65902.peg.2160
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.65902.peg.988
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.65902.peg.824
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.65902.peg.637
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65902.peg.1375
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65902.peg.1723
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65902.peg.1901
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.65902.peg.130
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.65902.peg.794
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65902.peg.1946
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.65902.peg.1952
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65902.peg.1946
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1956
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1959
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65902.peg.1947
Transcription_repair_cluster	Short-chain dehydrogenase/reductase SDR	fig|6666666.65902.peg.98
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.65902.peg.988
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.65902.peg.1439
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.65902.peg.2159
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.65902.peg.1439
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.65902.peg.2042
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.65902.peg.2159
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.65902.peg.1995
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.65902.peg.1441
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65902.peg.2197
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.65902.peg.2278
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.65902.peg.1919
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.65902.peg.2279
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.65902.peg.2203
Translation_termination_factors_bacterial	Hypothetical protein YaeJ with similarity to translation release factor	fig|6666666.65902.peg.1079
Translation_termination_factors_bacterial	Hypothetical protein YaeJ with similarity to translation release factor	fig|6666666.65902.peg.1087
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65902.peg.371
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65902.peg.1921
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.65902.peg.1330
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.65902.peg.160
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.65902.peg.1961
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65902.peg.457
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65902.peg.2198
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1956
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65902.peg.1959
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.65902.peg.1998
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.65902.peg.157
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65902.peg.576
Trehalose_Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.65902.peg.1151
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65902.peg.2065
Trehalose_Biosynthesis	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.65902.peg.2068
Trehalose_Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.65902.peg.577
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.65902.peg.1149
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.65902.peg.375
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.65902.peg.884
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65902.peg.966
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65902.peg.2051
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.65902.peg.1213
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.65902.peg.1214
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.65902.peg.1215
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65902.peg.1212
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65902.peg.2055
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65902.peg.2050
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65902.peg.2050
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.65902.peg.1212
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.65902.peg.1210
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.65902.peg.1211
Tryptophan_synthesis	Tryptophan-associated membrane protein	fig|6666666.65902.peg.2056
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.65902.peg.1690
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.65902.peg.1725
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.65902.peg.1691
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.65902.peg.1278
Type_VI_secretion_systems	ClpB protein	fig|6666666.65902.peg.1801
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65902.peg.718
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65902.peg.1946
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65902.peg.1946
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65902.peg.1396
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65902.peg.369
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65902.peg.192
USS-DB-7	ClpB protein	fig|6666666.65902.peg.1801
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.65902.peg.1760
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.65902.peg.1759
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.65902.peg.1758
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65902.peg.378
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.65902.peg.154
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.65902.peg.2260
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65902.peg.441
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65902.peg.692
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65902.peg.1163
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.65902.peg.2241
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.65902.peg.1552
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiD	fig|6666666.65902.peg.1411
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.65902.peg.1372
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.65902.peg.608
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.65902.peg.442
YjeE	NAD(P)HX dehydratase	fig|6666666.65902.peg.30
YjeE	NAD(P)HX epimerase	fig|6666666.65902.peg.30
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65902.peg.2006
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65902.peg.2007
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65902.peg.2136
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.65902.peg.1559
cAMP_signaling_in_bacteria	ElaA protein	fig|6666666.65902.peg.1253
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.65902.peg.1282
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65902.peg.604
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65902.peg.422
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65902.peg.419
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65902.peg.419
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.65902.peg.1554
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65902.peg.417
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.581
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65902.peg.1037
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65902.peg.2166
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.65902.peg.351
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.65902.peg.1969
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.254
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.255
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.833
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.1303
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.1698
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65902.peg.2017
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1152
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65902.peg.1557
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65902.peg.213
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65902.peg.225
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65902.peg.2192
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65902.peg.2272
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65902.peg.2272
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65902.peg.2193
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65902.peg.2149
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.65902.peg.615
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.65902.peg.2146
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.65902.peg.1166
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.65902.peg.1161
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.65902.peg.1167
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.65902.peg.2146
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65902.peg.1146
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65902.peg.1287
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.65902.peg.1166
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.65902.peg.1161
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.65902.peg.1167
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.65902.peg.1287
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65902.peg.1061
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.65902.peg.2142
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.65902.peg.1204
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.65902.peg.8
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.65902.peg.908
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.65902.peg.837
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.65902.peg.469
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.65902.peg.468
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65902.peg.1603
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65902.peg.2122
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.65902.peg.921
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.65902.peg.423
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.65902.peg.2014
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65902.peg.112
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.65902.peg.816
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.65902.peg.1892
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65902.peg.2108
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65902.peg.1913
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65902.peg.2273
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65902.peg.2245
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.65902.peg.624
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65902.peg.2040
tRNAs	tRNA-Ala-CGC	fig|6666666.65902.rna.33
tRNAs	tRNA-Ala-GGC	fig|6666666.65902.rna.48
tRNAs	tRNA-Ala-GGC	fig|6666666.65902.rna.49
tRNAs	tRNA-Arg-ACG	fig|6666666.65902.rna.2
tRNAs	tRNA-Arg-ACG	fig|6666666.65902.rna.35
tRNAs	tRNA-Arg-CCG	fig|6666666.65902.rna.28
tRNAs	tRNA-Cys-GCA	fig|6666666.65902.rna.16
tRNAs	tRNA-Gly-CCC	fig|6666666.65902.rna.31
tRNAs	tRNA-Gly-GCC	fig|6666666.65902.rna.14
tRNAs	tRNA-Gly-GCC	fig|6666666.65902.rna.17
tRNAs	tRNA-Gly-GCC	fig|6666666.65902.rna.19
tRNAs	tRNA-Leu-CAA	fig|6666666.65902.rna.53
tRNAs	tRNA-Leu-CAG	fig|6666666.65902.rna.25
tRNAs	tRNA-Leu-GAG	fig|6666666.65902.rna.21
tRNAs	tRNA-Phe-GAA	fig|6666666.65902.rna.8
tRNAs	tRNA-Pro-CGG	fig|6666666.65902.rna.27
tRNAs	tRNA-Pro-GGG	fig|6666666.65902.rna.13
tRNAs	tRNA-Ser-CGA	fig|6666666.65902.rna.29
tRNAs	tRNA-Trp-CCA	fig|6666666.65902.rna.7
tRNAs	tRNA-Val-CAC	fig|6666666.65902.rna.20
tRNAs	tRNA-Val-GAC	fig|6666666.65902.rna.15
tRNAs	tRNA-Val-GAC	fig|6666666.65902.rna.18