16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.694
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.1889
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.65905.peg.1892
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.65905.peg.1891
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.65905.peg.1067
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65905.peg.680
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65905.peg.1078
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65905.peg.531
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65905.peg.1106
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.329
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.1206
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65905.peg.1552
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65905.peg.1222
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65905.peg.1227
5-FCL-like_protein	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.65905.peg.1527
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65905.peg.1094
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65905.peg.1095
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65905.peg.1956
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65905.peg.994
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65905.peg.333
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65905.peg.1807
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65905.peg.1335
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.65905.peg.628
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65905.peg.174
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.65905.peg.627
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65905.peg.323
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.65905.peg.629
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65905.peg.1706
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.65905.peg.1707
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.65905.peg.1709
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.65905.peg.1708
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.65905.peg.1522
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.65905.peg.1439
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65905.peg.1056
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65905.peg.414
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.65905.peg.1404
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65905.peg.1403
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65905.peg.1021
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65905.peg.1471
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65905.peg.1878
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65905.peg.351
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.65905.peg.1662
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65905.peg.957
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65905.peg.112
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65905.peg.957
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.65905.peg.1264
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65905.peg.1919
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65905.peg.1378
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65905.peg.1583
Alkanesulfonate_assimilation	FMN reductase (EC 1.5.1.29)	fig|6666666.65905.peg.1642
Alkanesulfonates_Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.65905.peg.1642
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65905.peg.1838
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65905.peg.1920
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.65905.peg.179
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.65905.peg.556
Ammonia_assimilation	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)	fig|6666666.65905.peg.918
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65905.peg.1938
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1931
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1939
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65905.peg.855
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65905.peg.186
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65905.peg.187
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65905.peg.1471
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65905.peg.846
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65905.peg.855
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.65905.peg.186
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.65905.peg.187
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65905.peg.1471
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65905.peg.846
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.65905.peg.854
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65905.peg.855
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.65905.peg.845
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.65905.peg.853
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.65905.peg.1012
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.65905.peg.847
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65905.peg.846
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.65905.peg.854
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.65905.peg.855
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.65905.peg.845
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.65905.peg.853
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.65905.peg.1012
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.65905.peg.847
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.65905.peg.846
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.65905.peg.188
Aromatic_amino_acid_degradation	Aromatic amino acid transport protein AroP	fig|6666666.65905.peg.1474
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.65905.peg.1472
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65905.peg.342
Bacillus_subtilis_scratch_-_gjo	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65905.peg.1360
Bacillus_subtilis_scratch_-_gjo	Ku domain protein	fig|6666666.65905.peg.1361
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.133
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.240
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.1607
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65905.peg.866
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.694
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.1889
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.65905.peg.1749
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.65905.peg.1881
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65905.peg.695
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.65905.peg.1884
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.65905.peg.276
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65905.peg.1880
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.65905.peg.1892
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65905.peg.275
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.65905.peg.1247
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.65905.peg.583
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.51
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.562
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.65905.peg.654
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.65905.peg.1195
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.65905.peg.302
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65905.peg.1828
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.65905.peg.1891
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.133
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.240
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.1607
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.694
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.1889
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.65905.peg.1749
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.65905.peg.1881
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65905.peg.695
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.65905.peg.1884
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65905.peg.1880
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.65905.peg.1892
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.51
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.562
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65905.peg.561
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.65905.peg.1195
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.65905.peg.302
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65905.peg.51
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.65905.peg.562
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.65905.peg.561
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.65905.peg.168
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.65905.peg.1828
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.65905.peg.1821
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65905.peg.1630
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.65905.peg.1959
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.65905.peg.89
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.65905.peg.1700
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65905.peg.432
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65905.peg.431
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65905.peg.433
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65905.peg.430
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.65905.peg.1671
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65905.peg.1949
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65905.peg.1593
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65905.peg.104
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65905.peg.1741
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65905.peg.102
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.65905.peg.719
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65905.peg.1191
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65905.peg.101
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.343
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.403
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.641
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.873
Biotin_biosynthesis	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.65905.peg.103
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.65905.peg.1853
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65905.peg.1740
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65905.peg.1742
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65905.peg.104
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65905.peg.102
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.65905.peg.719
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65905.peg.224
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65905.peg.101
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.65905.peg.104
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65905.peg.1741
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.65905.peg.102
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.65905.peg.719
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.65905.peg.1191
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65905.peg.224
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.65905.peg.101
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.343
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.403
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.641
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.873
Biotin_synthesis_cluster	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.65905.peg.103
Biotin_synthesis_cluster	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65905.peg.1740
Biotin_synthesis_cluster	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65905.peg.1742
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65905.peg.108
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65905.peg.1341
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65905.peg.1340
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65905.peg.1349
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65905.peg.1919
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65905.peg.1353
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.65905.peg.1513
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.65905.peg.1641
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.65905.peg.1945
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.65905.peg.1947
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.65905.peg.1946
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.65905.peg.266
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65905.peg.1763
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.65905.peg.1764
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.65905.peg.1765
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65905.peg.1759
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.65905.peg.598
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.65905.peg.599
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65905.peg.835
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65905.peg.1040
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65905.peg.1948
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.65905.peg.1502
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.65905.peg.655
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65905.peg.1617
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65905.peg.1652
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.65905.peg.654
CBSS-176299.4.peg.1292	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65905.peg.131
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65905.peg.1833
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65905.peg.1802
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65905.peg.1803
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.65905.peg.1136
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.65905.peg.1589
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.65905.peg.1590
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65905.peg.1593
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65905.peg.1584
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.65905.peg.1586
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.65905.peg.1585
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.65905.peg.1587
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.65905.peg.432
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65905.peg.431
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.65905.peg.433
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65905.peg.423
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.65905.peg.609
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.65905.peg.430
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65905.peg.49
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65905.peg.965
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.65905.peg.111
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.65905.peg.224
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.65905.peg.1404
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65905.peg.1403
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.65905.peg.1863
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65905.peg.1815
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65905.peg.586
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65905.peg.1022
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.65905.peg.909
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65905.peg.1646
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65905.peg.1330
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65905.peg.1414
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.312
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.811
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.65905.peg.1797
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65905.peg.1174
CBSS-279010.5.peg.587	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65905.peg.1174
CBSS-279010.5.peg.587	Lactam utilization protein LamB	fig|6666666.65905.peg.1173
CBSS-279010.5.peg.587	hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	fig|6666666.65905.peg.1178
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.65905.peg.56
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1176
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1702
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65905.peg.325
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65905.peg.1784
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.65905.peg.1794
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.65905.peg.1793
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65905.peg.54
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.65905.peg.52
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.65905.peg.53
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.65905.peg.1926
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65905.peg.501
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.65905.peg.559
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.65905.peg.1938
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65905.peg.132
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65905.peg.1913
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65905.peg.1911
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.65905.peg.1949
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.65905.peg.1593
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65905.peg.957
CBSS-320388.3.peg.3759	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65905.peg.840
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65905.peg.957
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65905.peg.702
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65905.peg.1416
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65905.peg.1729
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.65905.peg.1796
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65905.peg.1072
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65905.peg.379
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.65905.peg.1599
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65905.peg.1600
CBSS-336982.3.peg.3874	FIG016317: Probable conserved transmembrane protein	fig|6666666.65905.peg.304
CBSS-336982.3.peg.3874	FIG043778: hypothetical protein	fig|6666666.65905.peg.306
CBSS-336982.3.peg.3874	FIG054221: Possible conserved alanine rich membrane protein	fig|6666666.65905.peg.305
CBSS-336982.3.peg.3874	Flp pilus assembly protein, ATPase CpaF	fig|6666666.65905.peg.303
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.301
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.412
CBSS-336982.3.peg.3874	Septum site-determining protein MinD	fig|6666666.65905.peg.302
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65905.peg.49
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65905.peg.1694
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65905.peg.1040
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.65905.peg.667
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.65905.peg.1947
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.65905.peg.1688
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65905.peg.40
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65905.peg.1868
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65905.peg.1099
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.65905.peg.1371
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65905.peg.1071
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65905.peg.1378
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.65905.peg.1302
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.65905.peg.1140
CBSS-410289.13.peg.3174	Epoxide hydrolase (EC 3.3.2.9)	fig|6666666.65905.peg.298
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.65905.peg.46
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.65905.peg.47
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.65905.peg.48
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.65905.peg.45
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.65905.peg.44
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.65905.peg.290
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.65905.peg.291
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.65905.peg.292
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65905.peg.293
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.65905.peg.1621
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65905.peg.1378
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.869
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.1214
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65905.peg.1729
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65905.peg.1925
CBSS-89187.3.peg.2957	Glutathione S-transferase domain protein	fig|6666666.65905.peg.1357
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65905.peg.1613
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65905.peg.899
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65905.peg.983
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65905.peg.919
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65905.peg.1602
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65905.peg.1029
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65905.peg.1601
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65905.peg.181
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65905.peg.1612
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.65905.peg.1594
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65905.peg.1600
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.65905.peg.575
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.65905.peg.1230
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.65905.peg.1525
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65905.peg.324
Carbon_Starvation	Starvation sensing protein RspA	fig|6666666.65905.peg.136
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.65905.peg.902
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.133
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.240
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.1607
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65905.peg.866
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65905.peg.867
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65905.peg.1026
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65905.peg.1032
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65905.peg.1861
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.65905.peg.206
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65905.peg.1815
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.65905.peg.1016
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.65905.peg.1879
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.65905.peg.1881
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.65905.peg.1880
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.65905.peg.1877
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.65905.peg.1876
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.65905.peg.1875
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.65905.peg.1878
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65905.peg.1882
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65905.peg.374
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.65905.peg.1155
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65905.peg.942
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65905.peg.821
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.65905.peg.822
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.65905.peg.823
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.65905.peg.823
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.65905.peg.823
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.65905.peg.731
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65905.peg.733
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Glycine betaine ABC transport system permease protein	fig|6666666.65905.peg.927
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65905.peg.732
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65905.peg.1066
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.65905.peg.1488
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.65905.peg.929
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)	fig|6666666.65905.peg.928
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.65905.peg.926
Choline_uptake_and_conversion_to_betaine_clusters	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.65905.peg.731
Choline_uptake_and_conversion_to_betaine_clusters	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.65905.peg.733
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65905.peg.732
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65905.peg.1066
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.65905.peg.1488
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65905.peg.992
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.65905.peg.1844
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.65905.peg.1346
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65905.peg.993
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65905.peg.993
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.65905.peg.1847
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65905.peg.1900
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65905.peg.1628
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65905.peg.1629
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65905.peg.232
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.65905.peg.28
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65905.peg.1631
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65905.peg.1633
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65905.peg.1630
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65905.peg.1548
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.65905.peg.1544
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.65905.peg.1540
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.65905.peg.1543
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65905.peg.1546
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65905.peg.1547
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65905.peg.1545
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.65905.peg.1542
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.65905.peg.1541
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65905.peg.1636
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.65905.peg.1634
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65905.peg.1633
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.65905.peg.1918
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.65905.peg.40
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.65905.peg.1426
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.65905.peg.204
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.65905.peg.1353
Coenzyme_A_Biosynthesis	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65905.peg.858
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65905.peg.857
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.65905.peg.995
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.65905.peg.1330
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.65905.peg.1616
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.65905.peg.1616
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65905.peg.965
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.65905.peg.310
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.65905.peg.1122
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.65905.peg.1900
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65905.peg.1628
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.65905.peg.1629
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.65905.peg.232
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.65905.peg.1631
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.65905.peg.1633
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.65905.peg.1630
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65905.peg.820
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65905.peg.10
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.65905.peg.294
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65905.peg.12
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65905.peg.504
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65905.peg.973
Copper_homeostasis	Copper chaperone	fig|6666666.65905.peg.503
Copper_homeostasis	Copper resistance protein D	fig|6666666.65905.peg.162
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65905.peg.12
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65905.peg.504
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.65905.peg.973
Copper_homeostasis	Multicopper oxidase	fig|6666666.65905.peg.20
Copper_homeostasis	Multicopper oxidase	fig|6666666.65905.peg.1018
Copper_homeostasis	Multicopper oxidase	fig|6666666.65905.peg.1411
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.65905.peg.834
Cysteine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65905.peg.170
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65905.peg.9
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65905.peg.701
Cysteine_Biosynthesis	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65905.peg.960
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65905.peg.10
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65905.peg.958
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65905.peg.959
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.65905.peg.1145
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65905.peg.1364
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65905.peg.1838
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65905.peg.1838
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65905.peg.1523
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.65905.peg.135
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.65905.peg.1166
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.65905.peg.1186
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65905.peg.181
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.65905.peg.1694
DNA_Repair_Base_Excision	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65905.peg.1360
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.65905.peg.1371
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.65905.peg.209
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.65905.peg.1072
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	fig|6666666.65905.peg.676
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.65905.peg.294
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65905.peg.518
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65905.peg.1102
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.65905.peg.1832
DNA_Repair_Base_Excision	Ku domain protein	fig|6666666.65905.peg.1361
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.65905.peg.1334
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65905.peg.579
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65905.peg.572
DNA_ligases	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65905.peg.1360
DNA_ligases	Ku domain protein	fig|6666666.65905.peg.1361
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.65905.peg.97
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.65905.peg.99
DNA_processing_cluster	Recombination protein RecR	fig|6666666.65905.peg.100
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.65905.peg.196
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.65905.peg.446
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.65905.peg.202
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.65905.peg.1606
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.65905.peg.835
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.65905.peg.729
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.65905.peg.1872
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.65905.peg.976
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.65905.peg.829
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.65905.peg.46
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65905.peg.901
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.65905.peg.1219
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65905.peg.979
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65905.peg.980
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65905.peg.1506
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.65905.peg.1071
DNA_repair,_bacterial	RecA protein	fig|6666666.65905.peg.1738
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65905.peg.1720
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.65905.peg.507
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.65905.peg.83
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.65905.peg.245
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.65905.peg.246
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.65905.peg.570
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.65905.peg.655
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.65905.peg.1738
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.65905.peg.100
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.65905.peg.507
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.65905.peg.1738
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.65905.peg.1720
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.65905.peg.1099
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.65905.peg.248
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.65905.peg.460
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.65905.peg.1745
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.65905.peg.1738
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.65905.peg.1737
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65905.peg.1801
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.65905.peg.568
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65905.peg.579
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65905.peg.572
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.65905.peg.569
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.65905.peg.570
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.65905.peg.736
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.65905.peg.580
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65905.peg.1861
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.65905.peg.571
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.65905.peg.1829
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.312
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.811
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65905.peg.579
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65905.peg.572
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65905.peg.800
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.65905.peg.785
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.65905.peg.1094
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.65905.peg.801
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.65905.peg.1188
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.65905.peg.1187
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.65905.peg.799
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.65905.peg.1094
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.65905.peg.784
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.65905.peg.795
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.65905.peg.794
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.65905.peg.793
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.65905.peg.1095
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.65905.peg.912
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65905.peg.1021
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65905.peg.311
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.65905.peg.1343
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65905.peg.1455
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.65905.peg.1920
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65905.peg.1923
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65905.peg.1455
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65905.peg.1956
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.65905.peg.114
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.65905.peg.338
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65905.peg.112
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.65905.peg.1186
Dihydroxyacetone_kinases	Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29)	fig|6666666.65905.peg.538
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65905.peg.416
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65905.peg.1144
EC699-706	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.65905.peg.1174
EC699-706	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.65905.peg.1174
EC699-706	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.65905.peg.460
EC699-706	Lactam utilization protein LamB	fig|6666666.65905.peg.1173
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.65905.peg.1741
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65905.peg.470
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.65905.peg.1740
ECF_class_transporters	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65905.peg.1573
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65905.peg.469
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.65905.peg.1742
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65905.peg.471
Encapsulating_protein_for_DyP-type_peroxidase_and_ferritin-like_protein_oligomers	Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup	fig|6666666.65905.peg.1530
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65905.peg.1598
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.65905.peg.1009
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.65905.peg.135
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65905.peg.1596
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65905.peg.1602
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.65905.peg.1597
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65905.peg.1601
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65905.peg.345
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65905.peg.1687
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65905.peg.1842
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.65905.peg.909
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65905.peg.910
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.65905.peg.388
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65905.peg.586
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.65905.peg.1022
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65905.peg.405
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.65905.peg.1193
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65905.peg.405
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.65905.peg.1193
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.65905.peg.1957
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65905.peg.1175
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.65905.peg.1199
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65905.peg.1175
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.65905.peg.1199
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.65905.peg.131
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.65905.peg.404
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65905.peg.909
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65905.peg.910
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.65905.peg.909
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.65905.peg.531
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65905.peg.910
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65905.peg.1859
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.65905.peg.1860
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.65905.peg.1858
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain	fig|6666666.65905.peg.1014
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport permease EfeU	fig|6666666.65905.peg.1013
Ferrous_iron_transporter_EfeUOB,_low-pH-induced	Ferrous iron transport peroxidase EfeB	fig|6666666.65905.peg.1015
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.65905.peg.1688
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.694
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.1889
Flavohaemoglobin	ABC-type Fe3+-siderophore transport system, permease 2 component	fig|6666666.65905.peg.1239
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65905.peg.862
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65905.peg.1078
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.65905.peg.992
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.65905.peg.1106
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.65905.peg.591
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65905.peg.863
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65905.peg.864
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.65905.peg.591
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65905.peg.865
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.65905.peg.993
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.65905.peg.993
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.65905.peg.1105
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.65905.peg.1753
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.65905.peg.862
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.65905.peg.866
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.65905.peg.863
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.65905.peg.864
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.65905.peg.861
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65905.peg.865
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65905.peg.867
Folate_biosynthesis_cluster	Ketopantoate reductase PanG (EC 1.1.1.169)	fig|6666666.65905.peg.858
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.65905.peg.857
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.65905.peg.1232
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.65905.peg.1497
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.65905.peg.1498
Formate_hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.65905.peg.1499
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.65905.peg.1496
Formate_hydrogenase	Formate dehydrogenase O putative subunit	fig|6666666.65905.peg.1495
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.65905.peg.1316
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-mannosidase (EC 3.2.1.24)	fig|6666666.65905.peg.717
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.65905.peg.1723
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.65905.peg.1722
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.65905.peg.1595
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.65905.peg.1721
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.65905.peg.1027
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65905.peg.1915
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.65905.peg.851
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.65905.peg.1044
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.65905.peg.1915
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65905.peg.965
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.65905.peg.1554
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)	fig|6666666.65905.peg.918
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65905.peg.88
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.65905.peg.134
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1931
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1939
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.65905.peg.1871
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	glutamine synthetase family protein	fig|6666666.65905.peg.1170
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1931
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1939
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65905.peg.76
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.65905.peg.1814
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65905.peg.1645
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65905.peg.76
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.65905.peg.778
Glutathione_analogs:_mycothiol	Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	fig|6666666.65905.peg.316
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.65905.peg.344
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.65905.peg.1557
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.65905.peg.998
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.65905.peg.1481
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.65905.peg.1783
Glutathione_analogs:_mycothiol	Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR	fig|6666666.65905.peg.317
Glutathione_analogs:_mycothiol	S-nitrosomycothiol reductase MscR	fig|6666666.65905.peg.316
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65905.peg.1838
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65905.peg.1842
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65905.peg.994
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65905.peg.1925
Glycine_and_Serine_Utilization	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65905.peg.170
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65905.peg.605
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65905.peg.1350
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65905.peg.1838
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.65905.peg.1926
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65905.peg.1924
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65905.peg.1643
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65905.peg.1696
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65905.peg.1698
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65905.peg.1113
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.301
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.412
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65905.peg.994
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65905.peg.1156
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65905.peg.1159
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65905.peg.1163
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65905.peg.1695
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.65905.peg.1697
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65905.peg.379
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65905.peg.1925
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.329
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.1206
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.65905.peg.1926
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65905.peg.1924
Glycine_cleavage_system	Sodium/glycine symporter GlyP	fig|6666666.65905.peg.69
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65905.peg.501
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.65905.peg.559
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65905.peg.558
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65905.peg.1427
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65905.peg.1385
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65905.peg.640
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.65905.peg.1462
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65905.peg.1854
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65905.peg.1841
Glycogen_metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.65905.peg.1463
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65905.peg.1364
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.65905.peg.1009
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65905.peg.983
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.65905.peg.919
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65905.peg.1100
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65905.peg.1602
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.65905.peg.1029
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65905.peg.1601
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65905.peg.345
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65905.peg.1687
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65905.peg.1842
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65905.peg.1600
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65905.peg.1364
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.65905.peg.1009
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.65905.peg.983
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.65905.peg.1100
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.65905.peg.1601
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65905.peg.345
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65905.peg.1842
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.65905.peg.1600
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.65905.peg.655
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.65905.peg.654
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65905.peg.659
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65905.peg.650
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.65905.peg.658
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65905.peg.1571
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65905.peg.1112
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65905.peg.648
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.65905.peg.951
GroEL_GroES	Chaperone protein DnaK	fig|6666666.65905.peg.953
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65905.peg.886
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.65905.peg.1257
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.65905.peg.1258
GroEL_GroES	Heat shock protein GrpE	fig|6666666.65905.peg.952
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.65905.peg.647
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65905.peg.648
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.65905.peg.951
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.65905.peg.953
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.65905.peg.952
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.65905.peg.647
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.65905.peg.950
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65905.peg.91
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.65905.peg.90
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65905.peg.649
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.65905.peg.1861
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.65905.peg.621
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.65905.peg.1067
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.65905.peg.277
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.65905.peg.1380
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.65905.peg.27
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.65905.peg.1567
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.65905.peg.423
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.65905.peg.414
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65905.peg.1345
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.65905.peg.1677
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.65905.peg.415
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.65905.peg.417
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.65905.peg.421
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.65905.peg.420
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65905.peg.416
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.65905.peg.1144
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.65905.peg.416
Hfl_operon	GTP-binding protein HflX	fig|6666666.65905.peg.1726
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65905.peg.777
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65905.peg.346
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65905.peg.347
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65905.peg.774
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65905.peg.775
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65905.peg.776
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.65905.peg.773
Histidine_Degradation	Formiminoglutamase (EC 3.5.3.8)	fig|6666666.65905.peg.1446
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.65905.peg.1442
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.65905.peg.1443
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.65905.peg.1440
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.65905.peg.1441
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65905.peg.1342
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.65905.peg.1444
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65905.peg.1684
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.65905.peg.91
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.65905.peg.570
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.65905.peg.736
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.65905.peg.1497
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.65905.peg.1499
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.65905.peg.1479
Inorganic_Sulfur_Assimilation	Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	fig|6666666.65905.peg.960
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.65905.peg.911
Inorganic_Sulfur_Assimilation	Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	fig|6666666.65905.peg.1148
Inorganic_Sulfur_Assimilation	Ferredoxin-like protein involved in electron transfer	fig|6666666.65905.peg.1147
Inorganic_Sulfur_Assimilation	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.65905.peg.960
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.65905.peg.958
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.65905.peg.959
Inorganic_Sulfur_Assimilation	Sulfate transporter, CysZ-type	fig|6666666.65905.peg.1145
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65905.peg.1233
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.65905.peg.1865
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.312
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.811
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65905.peg.1265
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65905.peg.650
Inteins	Translation initiation factor 2	fig|6666666.65905.peg.1765
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65905.peg.1378
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65905.peg.1583
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.65905.peg.781
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.65905.peg.782
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.65905.peg.1584
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.65905.peg.1586
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.65905.peg.1585
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.65905.peg.1587
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.65905.peg.1581
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.65905.peg.1582
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.65905.peg.1916
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65905.peg.1919
Isoleucine_degradation	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65905.peg.1923
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65905.peg.1787
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65905.peg.1680
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65905.peg.1785
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65905.peg.824
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65905.peg.825
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65905.peg.1056
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65905.peg.978
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.65905.peg.453
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65905.peg.637
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65905.peg.966
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65905.peg.637
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.65905.peg.966
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.65905.peg.1818
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.65905.peg.1819
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65905.peg.1419
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65905.peg.1040
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65905.peg.1948
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.65905.peg.390
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.65905.peg.461
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.65905.peg.456
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65905.peg.457
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65905.peg.462
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.65905.peg.454
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.65905.peg.455
Lactate_utilization	L-lactate permease	fig|6666666.65905.peg.1417
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.65905.peg.1169
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.65905.peg.1418
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.65905.peg.1419
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.65905.peg.1420
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1176
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1702
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65905.peg.1180
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.65905.peg.1943
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.65905.peg.1181
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1176
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1702
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.65905.peg.108
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.65905.peg.1341
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.65905.peg.1340
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.65905.peg.1349
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65905.peg.1919
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65905.peg.1919
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.65905.peg.1923
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.329
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.1206
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65905.peg.1535
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.65905.peg.1536
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.65905.peg.1534
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.65905.peg.1533
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.65905.peg.1928
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65905.peg.1927
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.65905.peg.1928
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.65905.peg.1927
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65905.peg.1868
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.65905.peg.1843
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.65905.peg.1713
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.65905.peg.1713
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.65905.peg.1473
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65905.peg.116
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.65905.peg.111
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65905.peg.702
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.65905.peg.1416
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.65905.peg.1729
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65905.peg.1505
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65905.peg.1806
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.65905.peg.1840
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.65905.peg.1478
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.65905.peg.1471
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.65905.peg.1379
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.65905.peg.1380
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.65905.peg.1525
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.65905.peg.767
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.65905.peg.640
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.65905.peg.1841
Mannose_Metabolism	Alpha-mannosidase (EC 3.2.1.24)	fig|6666666.65905.peg.717
Mannose_Metabolism	Endoglucanase (EC 3.2.1.4)	fig|6666666.65905.peg.1002
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.65905.peg.1153
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.65905.peg.1143
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.65905.peg.1162
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.65905.peg.1162
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.65905.peg.1162
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65905.peg.115
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.65905.peg.1149
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65905.peg.451
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65905.peg.451
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.65905.peg.451
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.65905.peg.448
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.65905.peg.442
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65905.peg.444
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.65905.peg.440
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.65905.peg.451
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.869
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.1214
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.65905.peg.1700
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65905.peg.1888
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65905.peg.1887
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65905.peg.1401
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65905.peg.680
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.65905.peg.681
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.65905.peg.634
Methionine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65905.peg.170
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65905.peg.9
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.65905.peg.701
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.65905.peg.1225
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65905.peg.1415
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65905.peg.1414
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.65905.peg.1235
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.65905.peg.1236
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65905.peg.330
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.65905.peg.1234
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.65905.peg.1224
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.65905.peg.1224
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65905.peg.957
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65905.peg.1615
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65905.peg.342
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.65905.peg.10
Methionine_Degradation	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.65905.peg.170
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.65905.peg.1235
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.65905.peg.1236
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65905.peg.330
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.65905.peg.1234
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65905.peg.1956
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.65905.peg.957
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.65905.peg.1615
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.65905.peg.342
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.65905.peg.957
Methylcitrate_cycle	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.65905.peg.1204
Methylcitrate_cycle	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.65905.peg.1202
Methylcitrate_cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65905.peg.1571
Methylcitrate_cycle	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.65905.peg.1203
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65905.peg.458
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65905.peg.458
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.65905.peg.1645
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.65905.peg.1736
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65905.peg.865
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65905.peg.1609
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.65905.peg.1412
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65905.peg.1407
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65905.peg.763
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65905.peg.1409
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65905.peg.765
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.65905.peg.762
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.65905.peg.1413
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.65905.peg.1413
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65905.peg.764
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65905.peg.1076
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.65905.peg.1408
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.65905.peg.444
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65905.peg.889
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.65905.peg.1827
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65905.peg.889
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.65905.peg.1827
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65905.peg.890
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.65905.peg.1826
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65905.peg.891
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.65905.peg.1825
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65905.peg.892
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.65905.peg.1824
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65905.peg.893
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.65905.peg.1823
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65905.peg.894
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.65905.peg.1822
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.869
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.1214
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65905.peg.560
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65905.peg.464
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65905.peg.465
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.65905.peg.193
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.65905.peg.194
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.65905.peg.195
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.65905.peg.474
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.65905.peg.475
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.65905.peg.476
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.65905.peg.478
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.65905.peg.1364
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.65905.peg.942
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1176
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1702
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65905.peg.49
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.65905.peg.45
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.65905.peg.74
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.65905.peg.142
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.65905.peg.84
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.65905.peg.607
Nonhomologous_End-Joining_in_Bacteria	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.65905.peg.1360
Nonhomologous_End-Joining_in_Bacteria	Ku domain protein	fig|6666666.65905.peg.1361
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.65905.peg.1787
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65905.peg.1680
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.65905.peg.1785
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65905.peg.824
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65905.peg.825
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.65905.peg.1056
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.65905.peg.978
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.65905.peg.1011
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.65905.peg.49
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.65905.peg.1684
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.65905.peg.296
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.65905.peg.1448
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Nudix hydrolase family protein PA3470	fig|6666666.65905.peg.264
NusA-TFII_Cluster	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65905.peg.1766
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.65905.peg.1764
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.65905.peg.1767
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.65905.peg.1765
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.65905.peg.1508
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65905.peg.680
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65905.peg.1078
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65905.peg.1552
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65905.peg.1227
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65905.peg.1227
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.65905.peg.119
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.65905.peg.1713
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.65905.peg.369
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.65905.peg.658
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.65905.peg.1523
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.65905.peg.1598
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.65905.peg.1596
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.65905.peg.181
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.65905.peg.1021
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65905.peg.1612
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.65905.peg.1595
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.65905.peg.1594
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65905.peg.370
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65905.peg.1676
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.694
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.65905.peg.1889
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65905.peg.1337
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.869
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.65905.peg.1214
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65905.peg.1020
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.65905.peg.88
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1931
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.65905.peg.1939
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65905.peg.288
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65905.peg.509
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.65905.peg.510
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65905.peg.1020
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.65905.peg.1886
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65905.peg.341
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65905.peg.7
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.65905.peg.1883
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65905.peg.1882
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65905.peg.1885
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65905.peg.1888
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65905.peg.1887
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.65905.peg.1337
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.65905.peg.1882
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.65905.peg.1885
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.65905.peg.1888
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.65905.peg.1887
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.65905.peg.555
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.65905.peg.689
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65905.peg.688
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65905.peg.431
Persister_Cells	Cell division inhibitor	fig|6666666.65905.peg.1621
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, ATP-binding protein	fig|6666666.65905.peg.284
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, periplasmic binding protein	fig|6666666.65905.peg.281
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein I	fig|6666666.65905.peg.282
Petrobactin-mediated_iron_uptake_system	Petrobactin ABC transporter, permease protein II	fig|6666666.65905.peg.283
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65905.peg.777
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65905.peg.346
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65905.peg.347
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.65905.peg.850
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65905.peg.349
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65905.peg.1006
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.65905.peg.870
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.65905.peg.777
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.65905.peg.346
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.65905.peg.347
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65905.peg.650
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.65905.peg.650
Phosphate_metabolism	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.65905.peg.774
Phosphate_metabolism	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.65905.peg.775
Phosphate_metabolism	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.65905.peg.776
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.65905.peg.773
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.65905.peg.988
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.65905.peg.809
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.65905.peg.345
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.65905.peg.1925
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.65905.peg.119
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.329
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.1206
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65905.peg.1838
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.65905.peg.1926
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.65905.peg.1924
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65905.peg.994
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.51
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.562
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65905.peg.561
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.65905.peg.1755
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65905.peg.551
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65905.peg.349
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.65905.peg.1006
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.65905.peg.1687
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.65905.peg.883
Polysaccharide_deacetylases	Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)	fig|6666666.65905.peg.677
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.133
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.240
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.1607
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.65905.peg.1007
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.65905.peg.1080
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.65905.peg.803
Potassium_homeostasis	Potassium channel protein	fig|6666666.65905.peg.247
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.65905.peg.169
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.65905.peg.273
Proline,_4-hydroxyproline_uptake_and_utilization	L-Proline/Glycine betaine transporter ProP	fig|6666666.65905.peg.543
Proline,_4-hydroxyproline_uptake_and_utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65905.peg.955
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.65905.peg.1436
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.65905.peg.606
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.65905.peg.604
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.65905.peg.351
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65905.peg.910
Propionate-CoA_to_Succinate_Module	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.65905.peg.1204
Propionate-CoA_to_Succinate_Module	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.65905.peg.1202
Propionate-CoA_to_Succinate_Module	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.65905.peg.1571
Propionate-CoA_to_Succinate_Module	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65905.peg.1571
Propionate-CoA_to_Succinate_Module	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.65905.peg.1203
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.65905.peg.1548
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.65905.peg.1546
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65905.peg.1547
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.65905.peg.1545
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.65905.peg.119
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65905.peg.648
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.65905.peg.951
Protein_chaperones	Chaperone protein DnaK	fig|6666666.65905.peg.953
Protein_chaperones	ClpB protein	fig|6666666.65905.peg.925
Protein_chaperones	Heat shock protein GrpE	fig|6666666.65905.peg.952
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.65905.peg.950
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.65905.peg.1948
Protein_deglycation	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65905.peg.841
Protein_deglycation	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65905.peg.840
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.65905.peg.73
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.65905.peg.1627
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.65905.peg.588
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.65905.peg.85
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65905.peg.584
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65905.peg.585
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.65905.peg.839
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.65905.peg.925
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.65905.peg.829
Proteorhodopsin	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.65905.peg.841
Proteorhodopsin	Phytoene synthase (EC 2.5.1.32)	fig|6666666.65905.peg.840
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.65905.peg.587
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.65905.peg.1118
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65905.peg.796
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.65905.peg.1651
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.65905.peg.721
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65905.peg.1653
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.65905.peg.1213
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.65905.peg.1307
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.65905.peg.800
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.65905.peg.915
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65905.peg.1249
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.65905.peg.1618
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.65905.peg.867
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65905.peg.1251
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65905.peg.1252
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65905.peg.1574
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65905.peg.1757
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.65905.peg.595
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.65905.peg.112
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.65905.peg.979
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.65905.peg.980
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65905.peg.1251
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.65905.peg.1252
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.65905.peg.370
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65905.peg.1680
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65905.peg.605
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65905.peg.1350
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.65905.peg.1602
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65905.peg.1113
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.65905.peg.653
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.65905.peg.270
Pyruvate_Alanine_Serine_Interconversions	Alanine dehydrogenase (EC 1.4.1.1)	fig|6666666.65905.peg.167
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.65905.peg.1264
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.65905.peg.1919
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65905.peg.1643
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65905.peg.1696
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.65905.peg.1698
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65905.peg.1156
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65905.peg.1159
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65905.peg.1163
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65905.peg.1695
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.65905.peg.1697
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3)	fig|6666666.65905.peg.1347
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.65905.peg.411
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.65905.peg.1201
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.65905.peg.1842
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.65905.peg.909
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.65905.peg.1830
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.65905.peg.458
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65905.peg.910
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.65905.peg.1956
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.65905.peg.805
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.65905.peg.865
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65905.peg.1574
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.65905.peg.1757
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.65905.peg.688
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.65905.peg.35
Queuosine-Archaeosine_Biosynthesis	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.65905.peg.1573
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.65905.peg.37
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.65905.peg.34
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.65905.peg.1628
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65905.peg.759
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.65905.peg.1592
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65905.peg.620
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.65905.peg.1681
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.65905.peg.819
RNA_methylation	FIG011178: rRNA methylase	fig|6666666.65905.peg.192
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.65905.peg.1465
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.65905.peg.1789
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.65905.peg.649
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65905.peg.563
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.65905.peg.1817
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.65905.peg.410
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.65905.peg.1376
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.51
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.65905.peg.562
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.65905.peg.561
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.65905.peg.563
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.65905.peg.1301
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.65905.peg.464
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.65905.peg.465
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.65905.peg.1617
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.65905.peg.1944
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.65905.peg.155
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.65905.peg.1763
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.65905.peg.597
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.65905.peg.1833
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65905.peg.356
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65905.peg.54
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.65905.peg.1867
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.65905.peg.1299
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.65905.peg.1759
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.65905.peg.1432
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.65905.peg.1433
RecA_and_RecX	RecA protein	fig|6666666.65905.peg.1738
RecA_and_RecX	Regulatory protein RecX	fig|6666666.65905.peg.1737
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.65905.peg.560
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.65905.peg.943
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.65905.peg.579
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.65905.peg.572
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65905.peg.1528
Respiratory_dehydrogenases_1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.65905.peg.955
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.65905.peg.61
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65905.peg.319
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1176
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.65905.peg.1702
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65905.peg.324
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65905.peg.324
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65905.peg.325
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65905.peg.1609
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65905.peg.1611
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65905.peg.1608
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65905.peg.1611
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65905.peg.1758
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65905.peg.1609
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65905.peg.1758
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65905.peg.1610
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65905.peg.1609
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.65905.peg.1611
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.65905.peg.1608
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.65905.peg.1611
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.65905.peg.1609
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.65905.peg.1040
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.65905.peg.1528
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.65905.peg.1620
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65905.peg.1610
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.65905.peg.1612
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65905.peg.1335
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.65905.peg.1625
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.65905.peg.1800
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65905.peg.1801
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.65905.peg.1801
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.65905.peg.76
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65905.peg.78
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.65905.peg.1285
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65905.peg.80
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.65905.peg.1284
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.65905.peg.1718
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65905.peg.77
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.65905.peg.1286
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.65905.peg.474
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.65905.peg.1075
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.65905.peg.1311
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.65905.peg.461
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.65905.peg.456
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.65905.peg.1274
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.65905.peg.1322
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.65905.peg.1309
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.65905.peg.494
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.65905.peg.1300
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.65905.peg.1312
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.65905.peg.1804
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.65905.peg.457
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.65905.peg.193
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.65905.peg.598
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.65905.peg.492
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.65905.peg.489
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.65905.peg.1321
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.65905.peg.1024
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.65905.peg.599
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.65905.peg.1088
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.65905.peg.495
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.65905.peg.490
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.65905.peg.1310
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.65905.peg.1085
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.65905.peg.1084
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.65905.peg.1089
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.65905.peg.1089
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.65905.peg.567
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.65905.peg.194
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.65905.peg.75
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.65905.peg.487
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.65905.peg.488
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.65905.peg.1320
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.65905.peg.1313
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.65905.peg.462
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.65905.peg.506
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.65905.peg.225
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.65905.peg.1791
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.65905.peg.1794
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.65905.peg.1793
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.65905.peg.1660
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.65905.peg.1659
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.65905.peg.1658
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.65905.peg.1027
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.65905.peg.1493
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.65905.peg.1494
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.65905.peg.1492
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.65905.peg.1497
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.65905.peg.1499
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.65905.peg.1780
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.65905.peg.302
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.65905.peg.680
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.65905.peg.1078
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65905.peg.1571
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65905.peg.1112
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.65905.peg.1009
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.65905.peg.1552
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.65905.peg.1838
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.65905.peg.1227
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.65905.peg.1227
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65905.peg.405
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65905.peg.1192
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.65905.peg.1193
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65905.peg.994
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65905.peg.332
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65905.peg.333
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65905.peg.605
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.65905.peg.1350
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.65905.peg.1113
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.301
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.412
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.301
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.65905.peg.412
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.65905.peg.994
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65905.peg.1868
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.65905.peg.1706
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65905.peg.1265
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65905.peg.1020
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.65905.peg.821
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65905.peg.1020
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.65905.peg.822
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.65905.peg.823
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.65905.peg.823
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.65905.peg.823
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.65905.peg.1162
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.65905.peg.1162
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.65905.peg.1162
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65905.peg.1270
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.65905.peg.1700
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.65905.peg.1868
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65905.peg.1802
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.65905.peg.1803
Single-Rhodanese-domain_proteins	Glutathione S-transferase domain protein	fig|6666666.65905.peg.1357
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.65905.peg.516
Sortase	Sortase A, LPXTG specific	fig|6666666.65905.peg.602
Sortase	Sortase A, LPXTG specific	fig|6666666.65905.peg.603
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65905.peg.1026
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65905.peg.1032
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.65905.peg.1249
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65905.peg.886
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.65905.peg.1257
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65905.peg.330
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.65905.peg.1234
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.65905.peg.1091
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.65905.peg.277
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.65905.peg.1586
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.65905.peg.824
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65905.peg.825
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.133
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.240
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.65905.peg.1607
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.65905.peg.1652
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.65905.peg.334
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.65905.peg.331
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65905.peg.332
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65905.peg.333
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.65905.peg.431
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.65905.peg.1455
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.65905.peg.1571
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.65905.peg.1112
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.329
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.65905.peg.1206
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.65905.peg.1455
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.65905.peg.984
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.65905.peg.1222
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.65905.peg.1781
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.65905.peg.332
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.65905.peg.333
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.65905.peg.825
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.65905.peg.1905
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.65905.peg.1401
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.65905.peg.81
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.65905.peg.1913
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.65905.peg.1911
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.65905.peg.476
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.65905.peg.476
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.65905.peg.1680
Thiamin_biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.65905.peg.1808
Thiamin_biosynthesis	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.65905.peg.1527
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65905.peg.469
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65905.peg.761
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.65905.peg.1811
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.65905.peg.1807
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.65905.peg.1335
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.65905.peg.1810
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.65905.peg.471
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.65905.peg.1712
Thioredoxin-disulfide_reductase	Alkylhydroperoxidase protein D	fig|6666666.65905.peg.1711
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.65905.peg.1713
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.65905.peg.132
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.65905.peg.1646
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65905.peg.558
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.65905.peg.1427
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.65905.peg.909
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.65905.peg.910
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65905.peg.1156
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65905.peg.1159
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65905.peg.1163
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65905.peg.1695
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.65905.peg.1697
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.65905.peg.965
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.65905.peg.116
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.65905.peg.111
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.65905.peg.1415
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.65905.peg.1414
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.65905.peg.1935
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.65905.peg.1281
Transcription_factors_bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.65905.peg.1766
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.65905.peg.1815
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.65905.peg.455
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.65905.peg.1000
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.65905.peg.1405
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.65905.peg.1767
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.65905.peg.1625
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.65905.peg.1016
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.65905.peg.1688
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.65905.peg.1700
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.65905.peg.234
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.65905.peg.1083
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.65905.peg.476
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.65905.peg.1626
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.65905.peg.476
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.65905.peg.621
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.65905.peg.1626
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.65905.peg.1793
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.65905.peg.478
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.65905.peg.1613
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.65905.peg.1764
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.65905.peg.1305
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.65905.peg.1765
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.65905.peg.195
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.65905.peg.1784
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.65905.peg.1404
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.65905.peg.273
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.65905.peg.1034
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.65905.peg.899
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65905.peg.1026
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.65905.peg.1032
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.65905.peg.1403
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.65905.peg.1791
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.65905.peg.277
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.65905.peg.1385
Trehalose_Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.65905.peg.812
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.65905.peg.1854
Trehalose_Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.65905.peg.1384
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.65905.peg.814
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.65905.peg.1782
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.65905.peg.838
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.65905.peg.1542
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.65905.peg.1458
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.65905.peg.1541
Type_VI_secretion_systems	ClpB protein	fig|6666666.65905.peg.925
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.65905.peg.1265
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.65905.peg.1020
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.65905.peg.1020
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.65905.peg.1270
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.65905.peg.341
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.65905.peg.7
USS-DB-7	ClpB protein	fig|6666666.65905.peg.925
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.65905.peg.1908
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.65905.peg.1909
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.65905.peg.1910
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.65905.peg.1676
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.65905.peg.1576
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.65905.peg.1749
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65905.peg.311
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.65905.peg.1343
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.65905.peg.1506
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.65905.peg.1334
Utilization_of_glutathione_as_a_sulphur_source	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.65905.peg.1814
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.65905.peg.1152
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiD	fig|6666666.65905.peg.1256
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.65905.peg.238
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.65905.peg.289
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.65905.peg.1062
YjeE	NAD(P)HX dehydratase	fig|6666666.65905.peg.515
YjeE	NAD(P)HX epimerase	fig|6666666.65905.peg.515
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.65905.peg.1407
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.65905.peg.763
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.65905.peg.1409
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.65905.peg.765
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.65905.peg.762
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65905.peg.584
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.65905.peg.585
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.65905.peg.1653
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.65905.peg.314
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.65905.peg.293
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.65905.peg.319
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.65905.peg.324
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.65905.peg.324
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.65905.peg.1154
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.65905.peg.325
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.65905.peg.1378
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.65905.peg.1583
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.343
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.403
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.641
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.65905.peg.873
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.312
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.65905.peg.811
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.65905.peg.507
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.65905.peg.1609
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.65905.peg.1758
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.65905.peg.1758
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.65905.peg.1610
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.65905.peg.1636
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.65905.peg.856
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.65905.peg.1640
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.65905.peg.1367
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.65905.peg.1362
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.65905.peg.1368
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.65905.peg.1640
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.65905.peg.820
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.65905.peg.1345
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.65905.peg.1367
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.65905.peg.1362
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.65905.peg.1368
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.65905.peg.1345
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.65905.peg.659
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.65905.peg.1644
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.65905.peg.1873
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.65905.peg.536
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.65905.peg.848
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.65905.peg.1065
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.65905.peg.191
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.65905.peg.190
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.65905.peg.379
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.65905.peg.1669
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.65905.peg.1216
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.65905.peg.184
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.65905.peg.590
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.65905.peg.551
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.65905.peg.620
tRNAs	tRNA-Ala-CGC	fig|6666666.65905.rna.1
tRNAs	tRNA-Ala-GGC	fig|6666666.65905.rna.8
tRNAs	tRNA-Arg-ACG	fig|6666666.65905.rna.34
tRNAs	tRNA-Arg-ACG	fig|6666666.65905.rna.39
tRNAs	tRNA-Arg-CCG	fig|6666666.65905.rna.48
tRNAs	tRNA-Cys-GCA	fig|6666666.65905.rna.54
tRNAs	tRNA-Gly-CCC	fig|6666666.65905.rna.40
tRNAs	tRNA-Gly-GCC	fig|6666666.65905.rna.52
tRNAs	tRNA-Gly-GCC	fig|6666666.65905.rna.55
tRNAs	tRNA-Gly-GCC	fig|6666666.65905.rna.57
tRNAs	tRNA-Leu-CAA	fig|6666666.65905.rna.15
tRNAs	tRNA-Leu-CAG	fig|6666666.65905.rna.31
tRNAs	tRNA-Leu-GAG	fig|6666666.65905.rna.51
tRNAs	tRNA-Phe-GAA	fig|6666666.65905.rna.4
tRNAs	tRNA-Pro-CGG	fig|6666666.65905.rna.17
tRNAs	tRNA-Pro-GGG	fig|6666666.65905.rna.50
tRNAs	tRNA-Ser-CGA	fig|6666666.65905.rna.6
tRNAs	tRNA-Ser-GGA	fig|6666666.65905.rna.10
tRNAs	tRNA-Trp-CCA	fig|6666666.65905.rna.23
tRNAs	tRNA-Val-CAC	fig|6666666.65905.rna.58
tRNAs	tRNA-Val-GAC	fig|6666666.65905.rna.53
tRNAs	tRNA-Val-GAC	fig|6666666.65905.rna.56