16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.48
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1571
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1679
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.67441.peg.1682
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.67441.peg.1681
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.67441.peg.910
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.67441.peg.1753
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67441.peg.1686
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67441.peg.900
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.1879
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.2210
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.2221
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.67441.peg.862
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.384
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.667
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.67441.peg.1310
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.67441.peg.651
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.67441.peg.637
5-FCL-like_protein	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.67441.peg.36
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.67441.peg.878
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.67441.peg.877
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67441.peg.1758
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67441.peg.968
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67441.peg.388
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.67441.peg.31
5-FCL-like_protein	Thiaminase II (EC 3.5.99.2)	fig|6666666.67441.peg.36
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.67441.peg.1183
ABC_transporter_[iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component	fig|6666666.67441.peg.1965
ABC_transporter_[iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , permease component	fig|6666666.67441.peg.1129
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.67441.peg.1811
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.67441.peg.2267
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.67441.peg.1812
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.67441.peg.2234
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.67441.peg.339
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.67441.peg.1813
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.67441.peg.1267
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.67441.peg.1059
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67441.peg.1021
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.67441.peg.1816
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.67441.peg.409
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	FIG021574: Possible membrane protein related to de Novo purine biosynthesis	fig|6666666.67441.peg.876
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.67441.peg.878
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.67441.peg.878
A_hypothetical_coupled_to_de_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.67441.peg.877
Acetoin,_butanediol_metabolism	2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)	fig|6666666.67441.peg.2245
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.67441.peg.1144
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.67441.peg.1145
Acetoin,_butanediol_metabolism	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.67441.peg.1030
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.67441.peg.1144
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.67441.peg.1145
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.67441.peg.1436
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.67441.peg.2241
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.67441.peg.277
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.67441.peg.2241
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.67441.peg.583
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67441.peg.1711
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.184
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.1117
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.67441.peg.1349
Alanine_biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.67441.peg.2002
Alkanesulfonate_assimilation	FMN reductase (EC 1.5.1.29)	fig|6666666.67441.peg.1510
Alkanesulfonates_Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.67441.peg.1510
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.67441.peg.1173
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.67441.peg.545
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67441.peg.1048
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67441.peg.2300
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67441.peg.2302
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67441.peg.2462
Alpha-acetolactate_operon	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.67441.peg.1030
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.67441.peg.1712
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.67441.peg.1867
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.78
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.89
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.1004
Anaerobic_respiratory_reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.67441.peg.730
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.67441.peg.444
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.67441.peg.444
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.444
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.1687
Archaeal_lipids	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.67441.peg.1800
Archaeal_lipids	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.67441.peg.2442
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.67441.peg.1221
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.67441.peg.1222
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.67441.peg.1224
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.67441.peg.1226
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.67441.peg.1225
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.67441.peg.1220
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.67441.peg.1219
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.67441.peg.1220
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67441.peg.1021
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.67441.peg.1223
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.67441.peg.1221
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.67441.peg.1222
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.67441.peg.1224
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.67441.peg.1226
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.67441.peg.1225
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.67441.peg.1220
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.67441.peg.1219
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.67441.peg.1220
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67441.peg.1021
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.67441.peg.1223
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.67441.peg.1224
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.67441.peg.950
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.67441.peg.1223
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.67441.peg.1017
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.67441.peg.1019
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.78
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.89
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.1004
Arsenic_resistance	Arsenical pump-driving ATPase (EC 3.6.3.16)	fig|6666666.67441.peg.87
Arsenic_resistance	Arsenical resistance operon trans-acting repressor ArsD	fig|6666666.67441.peg.88
Arsenic_resistance	Arsenical-resistance protein ACR3	fig|6666666.67441.peg.77
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.67441.peg.2478
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.67441.peg.2479
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.67441.peg.2484
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67441.peg.2475
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67441.peg.2483
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.742
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.954
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1372
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1907
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.67441.peg.2073
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.48
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1571
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1679
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.67441.peg.1534
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.67441.peg.1671
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.67441.peg.49
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.67441.peg.1674
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.67441.peg.811
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.67441.peg.1670
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.67441.peg.1682
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.67441.peg.497
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.67441.peg.812
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.67441.peg.1862
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.1243
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.2500
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.67441.peg.1784
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.67441.peg.679
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.67441.peg.327
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.67441.peg.1603
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.67441.peg.1681
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.67441.peg.2234
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.67441.peg.545
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.742
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.954
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1372
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1907
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.48
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1571
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1679
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.67441.peg.1534
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.67441.peg.1671
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.67441.peg.49
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.67441.peg.1674
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.67441.peg.1670
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.67441.peg.1682
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.1243
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.2500
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.67441.peg.2499
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.67441.peg.679
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.67441.peg.327
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.67441.peg.1243
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.67441.peg.2500
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.67441.peg.2499
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.67441.peg.1534
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.67441.peg.1972
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67441.peg.1380
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67441.peg.2112
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.67441.peg.1540
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribonuclease J2 (endoribonuclease in RNA processing)	fig|6666666.67441.peg.1536
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.67441.peg.588
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.67441.peg.2003
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.67441.peg.589
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.67441.peg.1870
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.67441.peg.1603
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.67441.peg.1598
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.67441.peg.1402
Beta-Glucoside_Metabolism	Beta-glucoside bgl operon antiterminator, BglG family	fig|6666666.67441.peg.1200
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.67441.peg.1917
Bilin_Biosynthesis	Heme oxygenase (EC 1.14.99.3)	fig|6666666.67441.peg.1731
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.67441.peg.1486
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.67441.peg.428
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.427
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.1449
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.67441.peg.429
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.67441.peg.426
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.67441.peg.1462
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.67441.peg.1755
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.67441.peg.1358
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.67441.peg.1454
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.67441.peg.1526
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.67441.peg.1247
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.67441.peg.115
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.67441.peg.1174
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.67441.peg.688
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67441.peg.1245
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67441.peg.1248
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.376
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.400
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.401
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.1795
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2161
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2162
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2297
Biotin_biosynthesis	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.67441.peg.1453
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.67441.peg.1646
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.67441.peg.1525
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.67441.peg.1527
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.67441.peg.1454
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.67441.peg.1247
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.67441.peg.115
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.67441.peg.1174
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.67441.peg.724
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67441.peg.1245
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67441.peg.1248
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.67441.peg.1454
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.67441.peg.1526
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.67441.peg.1247
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.67441.peg.115
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.67441.peg.1174
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.67441.peg.688
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.67441.peg.724
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67441.peg.1245
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67441.peg.1248
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.376
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.400
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.401
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.1795
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2161
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2162
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2297
Biotin_synthesis_cluster	Pimeloyl-CoA synthase (EC 6.2.1.14)	fig|6666666.67441.peg.1453
Biotin_synthesis_cluster	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.67441.peg.1525
Biotin_synthesis_cluster	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.67441.peg.1527
Biotin_synthesis_cluster	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.67441.peg.1297
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.67441.peg.272
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.67441.peg.1177
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.67441.peg.1178
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.67441.peg.1151
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.67441.peg.1144
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.67441.peg.1145
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67441.peg.1711
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.67441.peg.1142
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.67441.peg.1146
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase biosynthetic (EC 4.3.1.19)	fig|6666666.67441.peg.1655
Branched-Chain_Amino_Acid_Biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.67441.peg.2002
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.67441.peg.1227
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.67441.peg.1412
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.67441.peg.1749
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.67441.peg.1751
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.67441.peg.1750
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.67441.peg.1548
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.67441.peg.1549
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.67441.peg.1550
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67441.peg.1544
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.67441.peg.1848
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.67441.peg.1850
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.67441.peg.1849
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.67441.peg.2033
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.67441.peg.1754
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.67441.peg.1783
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.67441.peg.1385
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.67441.peg.1425
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.67441.peg.1784
CBSS-176299.4.peg.1292	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.67441.peg.1910
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.67441.peg.1609
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.67441.peg.1591
CBSS-1806.1.peg.1285	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.67441.peg.1436
CBSS-1806.1.peg.1285	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.67441.peg.1458
CBSS-1806.1.peg.1285	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.67441.peg.1531
CBSS-1806.1.peg.1285	FIG000859: hypothetical protein YebC	fig|6666666.67441.peg.1434
CBSS-1806.1.peg.1285	FIG049476: HIT family protein	fig|6666666.67441.peg.1459
CBSS-1806.1.peg.1285	FIG053954: Probable conserved membrane protein	fig|6666666.67441.peg.1455
CBSS-1806.1.peg.1285	Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase)	fig|6666666.67441.peg.1457
CBSS-1806.1.peg.1285	Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57)	fig|6666666.67441.peg.1456
CBSS-1806.1.peg.1285	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	fig|6666666.67441.peg.235
CBSS-1806.1.peg.1285	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.67441.peg.234
CBSS-1806.1.peg.1285	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.67441.peg.1460
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.67441.peg.1355
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.67441.peg.2253
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.67441.peg.1356
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.67441.peg.1358
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.67441.peg.1350
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.67441.peg.1352
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.67441.peg.1351
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.67441.peg.1353
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.67441.peg.428
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.427
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.1449
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.67441.peg.429
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.67441.peg.424
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.67441.peg.425
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.67441.peg.426
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67441.peg.1241
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67441.peg.2246
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.67441.peg.283
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.67441.peg.724
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.67441.peg.1654
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.67441.peg.1593
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.67441.peg.2420
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.67441.peg.2122
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.67441.peg.1420
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.67441.peg.317
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.67441.peg.1188
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.67441.peg.1189
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.67441.peg.1079
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.67441.peg.1188
CBSS-269801.1.peg.1715	Lon-like protease with PDZ domain	fig|6666666.67441.peg.754
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.67441.peg.1189
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67441.peg.343
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.67441.peg.1586
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.67441.peg.1253
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67441.peg.1488
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.67441.peg.380
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67441.peg.553
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67441.peg.1570
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.67441.peg.1583
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.67441.peg.1582
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.67441.peg.1599
CBSS-313593.3.peg.2729	FIG111991: hypothetical protein	fig|6666666.67441.peg.109
CBSS-313593.3.peg.2729	RNA polymerase sigma-70 factor	fig|6666666.67441.peg.110
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67441.peg.1251
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.67441.peg.1244
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.67441.peg.1250
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.78
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.89
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.1004
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.67441.peg.2406
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.67441.peg.2497
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.67441.peg.1732
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.67441.peg.1908
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.67441.peg.1704
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.67441.peg.1702
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.67441.peg.1755
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.67441.peg.1358
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.67441.peg.1827
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.67441.peg.2328
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.67441.peg.2241
CBSS-320388.3.peg.3759	Phytoene synthase (EC 2.5.1.32)	fig|6666666.67441.peg.1936
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.67441.peg.2241
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67441.peg.1077
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.67441.peg.1515
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.67441.peg.1585
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.67441.peg.145
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.67441.peg.2360
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.67441.peg.1364
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67441.peg.1365
CBSS-336982.3.peg.3874	FIG016317: Probable conserved transmembrane protein	fig|6666666.67441.peg.329
CBSS-336982.3.peg.3874	FIG043778: hypothetical protein	fig|6666666.67441.peg.331
CBSS-336982.3.peg.3874	FIG054221: Possible conserved alanine rich membrane protein	fig|6666666.67441.peg.330
CBSS-336982.3.peg.3874	Flp pilus assembly protein, ATPase CpaF	fig|6666666.67441.peg.328
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.325
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.413
CBSS-336982.3.peg.3874	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.1928
CBSS-336982.3.peg.3874	Septum site-determining protein MinD	fig|6666666.67441.peg.327
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.67441.peg.61
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.67441.peg.1648
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.67441.peg.1419
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.67441.peg.1152
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.67441.peg.1153
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67441.peg.1241
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.67441.peg.1485
CBSS-349102.4.peg.3442	Sodium - Bile acid symporter	fig|6666666.67441.peg.2486
CBSS-349102.4.peg.3442	Transcriptional regulator, LysR family	fig|6666666.67441.peg.940
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.67441.peg.1769
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.67441.peg.1751
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.67441.peg.1479
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.67441.peg.1147
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67441.peg.1660
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.67441.peg.873
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.67441.peg.1122
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.67441.peg.1560
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.184
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.1117
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.67441.peg.559
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.67441.peg.720
CBSS-410289.13.peg.3174	Epoxide hydrolase (EC 3.3.2.9)	fig|6666666.67441.peg.323
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.67441.peg.1238
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.67441.peg.1239
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.67441.peg.1240
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.67441.peg.1237
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.67441.peg.1236
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.67441.peg.314
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.67441.peg.315
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.67441.peg.316
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.67441.peg.317
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.67441.peg.1786
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.67441.peg.1787
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67441.peg.1788
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67441.peg.1788
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.67441.peg.1574
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.67441.peg.1572
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.48
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1571
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1679
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.67441.peg.1573
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.67441.peg.1782
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.67441.peg.1394
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.184
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.1117
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.658
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.2076
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.67441.peg.1515
CBSS-89187.3.peg.2957	Glutathione S-transferase domain protein	fig|6666666.67441.peg.1139
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.67441.peg.1379
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67441.peg.1380
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67441.peg.2112
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.67441.peg.41
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.67441.peg.42
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.67441.peg.40
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.67441.peg.975
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.67441.peg.2186
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67441.peg.1367
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.67441.peg.927
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67441.peg.1366
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.67441.peg.1865
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.67441.peg.1377
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.67441.peg.1359
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67441.peg.1365
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.67441.peg.1270
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.67441.peg.379
Carbon_Starvation	Carbon starvation protein A	fig|6666666.67441.peg.1876
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.67441.peg.2115
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.67441.peg.444
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.444
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.1687
Carotenoids	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.67441.peg.1937
Carotenoids	Phytoene synthase (EC 2.5.1.32)	fig|6666666.67441.peg.1936
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.742
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.954
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1372
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1907
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.67441.peg.2073
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.67441.peg.2074
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.932
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.935
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.67441.peg.1652
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.67441.peg.1198
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.67441.peg.1593
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.67441.peg.947
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.67441.peg.1669
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.67441.peg.1671
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.67441.peg.1670
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.67441.peg.1668
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.67441.peg.1667
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.67441.peg.1666
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.67441.peg.1816
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.67441.peg.1672
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.67441.peg.708
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.67441.peg.2370
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.67441.peg.533
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.67441.peg.532
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67441.peg.2308
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67441.peg.2309
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.67441.peg.2311
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Glycine betaine ABC transport system permease protein	fig|6666666.67441.peg.106
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.67441.peg.908
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.67441.peg.2310
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.67441.peg.108
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.67441.peg.164
Choline_uptake_and_conversion_to_betaine_clusters	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67441.peg.2308
Choline_uptake_and_conversion_to_betaine_clusters	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67441.peg.2309
Choline_uptake_and_conversion_to_betaine_clusters	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.67441.peg.2311
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.67441.peg.908
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.67441.peg.2310
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.67441.peg.1985
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.67441.peg.2478
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.67441.peg.2477
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.67441.peg.2476
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.67441.peg.1631
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.67441.peg.2479
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.67441.peg.1160
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.67441.peg.1859
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.67441.peg.2479
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.67441.peg.1636
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.67441.peg.2484
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67441.peg.2475
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67441.peg.2483
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.67441.peg.1691
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.67441.peg.1400
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.67441.peg.1401
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.67441.peg.733
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.67441.peg.248
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.67441.peg.872
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.67441.peg.1403
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.67441.peg.2366
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.67441.peg.1405
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.67441.peg.1047
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.67441.peg.1402
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.67441.peg.884
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.67441.peg.1305
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005453: Putative DeoR-family transcriptional regulator	fig|6666666.67441.peg.1301
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.67441.peg.1296
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG019733: possible DNA-binding protein	fig|6666666.67441.peg.1300
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.67441.peg.1303
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67441.peg.1304
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67441.peg.1302
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.67441.peg.1299
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.67441.peg.1298
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.67441.peg.1408
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.67441.peg.1406
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.67441.peg.1407
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.67441.peg.1405
Cluster_containing_CofD-like_protein_and_co-occuring_with_DNA_repair	FIG000506: Predicted P-loop-containing kinase	fig|6666666.67441.peg.1370
Cluster_containing_CofD-like_protein_and_co-occuring_with_DNA_repair	FIG001886: Cytoplasmic hypothetical protein	fig|6666666.67441.peg.1368
Cluster_containing_CofD-like_protein_and_co-occuring_with_DNA_repair	FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like	fig|6666666.67441.peg.1369
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.67441.peg.1407
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.67441.peg.1789
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.67441.peg.1708
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.67441.peg.1562
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.67441.peg.1290
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.67441.peg.1290
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.67441.peg.1292
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.67441.peg.1291
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.67441.peg.1289
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.67441.peg.1561
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.67441.peg.1752
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.67441.peg.1709
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.67441.peg.1147
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.67441.peg.986
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.67441.peg.2482
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.67441.peg.1202
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.67441.peg.1146
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67441.peg.2064
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67441.peg.2481
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.67441.peg.967
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.67441.peg.1189
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.67441.peg.1384
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.67441.peg.1384
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.67441.peg.2482
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67441.peg.2064
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67441.peg.2481
Coenzyme_F420_hydrogenase	Hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.67441.peg.703
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67441.peg.2246
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.67441.peg.335
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.67441.peg.836
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.67441.peg.1691
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.67441.peg.1400
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.67441.peg.1401
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.67441.peg.733
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.67441.peg.1403
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.67441.peg.1405
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.67441.peg.1047
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.67441.peg.1402
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.67441.peg.2023
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.67441.peg.1962
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.67441.peg.319
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67441.peg.54
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67441.peg.2408
Copper_homeostasis	Copper chaperone	fig|6666666.67441.peg.2407
Copper_homeostasis	Copper resistance protein D	fig|6666666.67441.peg.1875
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67441.peg.54
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67441.peg.2408
Copper_homeostasis	Multicopper oxidase	fig|6666666.67441.peg.60
Copper_homeostasis	Multicopper oxidase	fig|6666666.67441.peg.1943
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.67441.peg.2032
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.67441.peg.1961
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.67441.peg.1962
D-Galacturonate_and_D-Glucuronate_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.67441.peg.543
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67441.peg.1134
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
D-gluconate_and_ketogluconates_metabolism	5-keto-D-gluconate 5-reductase (EC 1.1.1.69)	fig|6666666.67441.peg.260
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.67441.peg.1268
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.67441.peg.258
D-gluconate_and_ketogluconates_metabolism	L-idonate 5-dehydrogenase (EC 1.1.1.264)	fig|6666666.67441.peg.259
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.67441.peg.257
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.67441.peg.680
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.67441.peg.1865
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.67441.peg.1485
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.67441.peg.1122
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.67441.peg.1195
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.67441.peg.145
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.67441.peg.319
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.67441.peg.867
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.67441.peg.1608
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.67441.peg.2426
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.67441.peg.1184
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67441.peg.10
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67441.peg.6
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.67441.peg.264
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.67441.peg.265
DNA_processing_cluster	Recombination protein RecR	fig|6666666.67441.peg.266
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.67441.peg.1210
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.67441.peg.1204
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.67441.peg.1371
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.67441.peg.2033
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.67441.peg.144
DNA_repair,_bacterial	Alkylated DNA repair protein AlkB	fig|6666666.67441.peg.366
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.67441.peg.1664
DNA_repair,_bacterial	DNA polymerase IV-like protein ImuB	fig|6666666.67441.peg.619
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.67441.peg.2030
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.67441.peg.1238
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.67441.peg.653
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.67441.peg.2114
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.67441.peg.978
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.67441.peg.977
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.67441.peg.866
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.67441.peg.1560
DNA_repair,_bacterial	RecA protein	fig|6666666.67441.peg.1523
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.67441.peg.1499
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.67441.peg.2412
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.67441.peg.1924
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.67441.peg.747
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.67441.peg.748
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.67441.peg.4
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.67441.peg.1783
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.67441.peg.1523
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.67441.peg.266
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.67441.peg.2412
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.67441.peg.1523
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.67441.peg.1499
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.67441.peg.873
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.67441.peg.751
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.67441.peg.122
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.67441.peg.1530
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.67441.peg.1523
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.67441.peg.1522
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.67441.peg.1590
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.67441.peg.1
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67441.peg.10
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67441.peg.6
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.67441.peg.3
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.67441.peg.4
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.67441.peg.156
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.67441.peg.11
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.67441.peg.1652
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.67441.peg.5
DNA_replication_strays	DNA polymerase IV-like protein ImuB	fig|6666666.67441.peg.619
DNA_replication_strays	Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.67441.peg.629
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.67441.peg.1605
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67441.peg.343
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67441.peg.10
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67441.peg.6
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.67441.peg.2001
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.67441.peg.1989
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.67441.peg.878
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.67441.peg.2005
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.67441.peg.690
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.67441.peg.691
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.67441.peg.2000
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.67441.peg.878
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.67441.peg.1988
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.67441.peg.2240
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.67441.peg.2240
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.67441.peg.877
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.67441.peg.2125
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.67441.peg.938
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.67441.peg.1392
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.67441.peg.1389
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.67441.peg.1390
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.67441.peg.1391
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.67441.peg.1321
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.67441.peg.2189
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.67441.peg.1388
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.67441.peg.1393
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.67441.peg.664
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.67441.peg.1393
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.67441.peg.1333
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.67441.peg.2424
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.67441.peg.1043
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.67441.peg.1712
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.67441.peg.1715
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.67441.peg.1043
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67441.peg.1758
Denitrification	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.67441.peg.2369
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.67441.peg.514
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.67441.peg.513
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.67441.peg.512
Denitrifying_reductase_gene_clusters	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.67441.peg.511
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribonucleoside regulator DeoR (transcriptional repressor)	fig|6666666.67441.peg.273
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.67441.peg.279
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.67441.peg.277
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.67441.peg.680
Deoxyribose_and_Deoxynucleoside_Catabolism	Thymidine phosphorylase (EC 2.4.2.4)	fig|6666666.67441.peg.2040
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.67441.peg.1476
Di-Inositol-Phosphate_biosynthesis	Inositol-1-phosphate synthase (EC 5.5.1.4)	fig|6666666.67441.peg.124
Dihydroxyacetone_kinases	DHA-specific IIA component	fig|6666666.67441.peg.2459
Dihydroxyacetone_kinases	DHA-specific phosphocarrier protein HPr	fig|6666666.67441.peg.2459
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	fig|6666666.67441.peg.2458
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	fig|6666666.67441.peg.2457
Dihydroxyacetone_kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM	fig|6666666.67441.peg.2459
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67441.peg.417
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67441.peg.1557
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.67441.peg.1526
ECF_class_transporters	ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter	fig|6666666.67441.peg.2466
ECF_class_transporters	ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter	fig|6666666.67441.peg.2466
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.67441.peg.2165
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67441.peg.989
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.67441.peg.2163
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.67441.peg.1525
ECF_class_transporters	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.67441.peg.2464
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67441.peg.987
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.67441.peg.2164
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.67441.peg.1527
ECF_class_transporters	Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter	fig|6666666.67441.peg.2465
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67441.peg.990
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.67441.peg.1363
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.67441.peg.953
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.67441.peg.258
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.67441.peg.1361
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67441.peg.1367
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.67441.peg.1362
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67441.peg.1366
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67441.peg.403
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.67441.peg.1477
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67441.peg.1629
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.67441.peg.2122
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67441.peg.2123
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.67441.peg.2420
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.67441.peg.848
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.67441.peg.848
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.67441.peg.1762
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.67441.peg.672
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.67441.peg.672
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.67441.peg.1910
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.67441.peg.2296
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.67441.peg.2122
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.67441.peg.442
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.67441.peg.2375
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67441.peg.2123
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.67441.peg.2122
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.1879
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.2210
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.2221
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.67441.peg.442
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.67441.peg.2375
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67441.peg.2123
Fermentations:_Mixed_acid	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.67441.peg.1172
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.67441.peg.395
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.67441.peg.396
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.67441.peg.394
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.67441.peg.2495
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.67441.peg.1479
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.67441.peg.2495
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.48
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1571
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1679
Flavohaemoglobin	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.67441.peg.2369
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.67441.peg.2068
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67441.peg.900
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.67441.peg.1985
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.67441.peg.862
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.67441.peg.1854
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.67441.peg.2069
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.67441.peg.2070
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.67441.peg.1854
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67441.peg.2072
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.67441.peg.1859
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.67441.peg.863
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.67441.peg.1538
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.67441.peg.2068
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.67441.peg.2073
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.67441.peg.2069
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.67441.peg.2070
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.67441.peg.2067
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67441.peg.2072
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.67441.peg.2074
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67441.peg.2064
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67441.peg.2481
Folate_biosynthesis_cluster	transmembrane protein, distant homology with ydbS	fig|6666666.67441.peg.630
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.67441.peg.542
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Sucrose-6-phosphate hydrolase (EC 3.2.1.26)	fig|6666666.67441.peg.2340
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.67441.peg.1503
Fructose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.67441.peg.2339
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.67441.peg.1504
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.67441.peg.1505
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.67441.peg.1506
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.67441.peg.1507
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.67441.peg.1504
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.67441.peg.1505
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.67441.peg.1506
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.67441.peg.1504
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.67441.peg.1505
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.67441.peg.1506
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.67441.peg.1501
Fructose_utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.67441.peg.1508
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.67441.peg.1360
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.67441.peg.1500
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	fig|6666666.67441.peg.1959
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.67441.peg.1331
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)	fig|6666666.67441.peg.1332
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.67441.peg.1559
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.67441.peg.695
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.67441.peg.706
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.67441.peg.694
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.67441.peg.696
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.67441.peg.697
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.67441.peg.698
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.67441.peg.704
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.67441.peg.699
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	putative periplasmic protein kinase ArgK and related GTPases of G3E family	fig|6666666.67441.peg.1330
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.67441.peg.347
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.67441.peg.554
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.67441.peg.1705
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.67441.peg.2063
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.67441.peg.1622
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.67441.peg.1705
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67441.peg.2246
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.67441.peg.1311
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.67441.peg.1918
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67441.peg.1720
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67441.peg.1733
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.67441.peg.504
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.67441.peg.1663
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.67441.peg.1622
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67441.peg.1720
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67441.peg.1733
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.67441.peg.1935
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.67441.peg.1419
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.67441.peg.1935
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.67441.peg.1981
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.67441.peg.402
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.67441.peg.1318
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.67441.peg.963
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.67441.peg.1010
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.67441.peg.1568
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67441.peg.1629
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.67441.peg.2355
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol uptake facilitator protein	fig|6666666.67441.peg.2356
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.67441.peg.2357
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.67441.peg.1180
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate transporter	fig|6666666.67441.peg.299
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.67441.peg.2374
Glycerol_fermentation_to_1,3-propanediol	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	fig|6666666.67441.peg.1959
Glycerol_fermentation_to_1,3-propanediol	Glycerol uptake facilitator protein	fig|6666666.67441.peg.2356
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.67441.peg.1693
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.67441.peg.2358
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.67441.peg.1762
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.1879
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.2210
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67441.peg.2221
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2211
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2222
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.67441.peg.1458
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.67441.peg.1531
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.67441.peg.2115
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Dihydroxyacetone kinase family protein	fig|6666666.67441.peg.1185
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.67441.peg.2355
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.67441.peg.2357
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.67441.peg.1180
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.67441.peg.1578
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67441.peg.968
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67441.peg.943
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67441.peg.1150
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.67441.peg.503
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.67441.peg.1417
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.67441.peg.845
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.325
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.413
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.1928
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67441.peg.968
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.67441.peg.502
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.67441.peg.2360
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.67441.peg.2406
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.67441.peg.2497
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.67441.peg.2496
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.67441.peg.1109
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.67441.peg.1796
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.67441.peg.1032
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.67441.peg.1647
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.67441.peg.1628
Glycogen_metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.67441.peg.1031
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.67441.peg.1753
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67441.peg.1134
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.67441.peg.953
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.67441.peg.975
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.67441.peg.2186
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.67441.peg.870
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67441.peg.1367
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.67441.peg.927
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67441.peg.1366
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67441.peg.403
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.67441.peg.1477
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67441.peg.1629
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67441.peg.1365
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67441.peg.1134
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.67441.peg.953
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.67441.peg.975
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.67441.peg.870
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67441.peg.1366
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67441.peg.403
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67441.peg.1629
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67441.peg.1365
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.67441.peg.1783
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.67441.peg.1784
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.67441.peg.1778
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.67441.peg.1786
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.67441.peg.1787
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67441.peg.1788
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.67441.peg.1780
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.67441.peg.1341
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.67441.peg.846
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.67441.peg.1856
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.67441.peg.1790
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.67441.peg.2226
GroEL_GroES	Chaperone protein DnaK	fig|6666666.67441.peg.2228
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.67441.peg.591
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.67441.peg.2088
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.67441.peg.590
GroEL_GroES	Heat shock protein GrpE	fig|6666666.67441.peg.2227
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.67441.peg.1791
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.67441.peg.1792
HPr_catabolite_repression_system	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.67441.peg.1508
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.67441.peg.1790
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.67441.peg.2226
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.67441.peg.2228
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.67441.peg.2227
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.67441.peg.1791
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.67441.peg.1792
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.67441.peg.2225
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.67441.peg.1793
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.67441.peg.1915
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.67441.peg.1916
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.67441.peg.1789
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.67441.peg.1652
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.67441.peg.1832
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.67441.peg.910
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.67441.peg.810
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.67441.peg.1114
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.67441.peg.119
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.67441.peg.2336
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	FIG039061: hypothetical protein related to heme utilization	fig|6666666.67441.peg.2480
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, ATPase component HmuV	fig|6666666.67441.peg.647
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT	fig|6666666.67441.peg.645
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, permease protein HmuU	fig|6666666.67441.peg.646
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme oxygenase (EC 1.14.99.3)	fig|6666666.67441.peg.1731
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme transporter analogous to IsdDEF, ATP-binding protein	fig|6666666.67441.peg.601
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin, heme-dependent two component system response regulator ChrA	fig|6666666.67441.peg.471
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS	fig|6666666.67441.peg.470
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.67441.peg.2387
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.67441.peg.2450
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system, sensory histidine kinase HrrS	fig|6666666.67441.peg.2388
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron-dependent repressor IdeR/DtxR	fig|6666666.67441.peg.1487
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.67441.peg.236
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.67441.peg.239
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.67441.peg.291
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.67441.peg.292
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.67441.peg.1339
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.67441.peg.424
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.67441.peg.415
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.67441.peg.1162
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.67441.peg.1466
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.67441.peg.1793
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.67441.peg.416
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.67441.peg.418
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.67441.peg.423
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.67441.peg.422
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67441.peg.417
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67441.peg.1557
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.67441.peg.417
Heme_biosynthesis_orphans	Radical SAM domain heme biosynthesis protein	fig|6666666.67441.peg.1203
Hexose_Phosphate_Uptake_System	Hexose phosphate transport protein UhpT	fig|6666666.67441.peg.2390
Hfl_operon	GTP-binding protein HflX	fig|6666666.67441.peg.1512
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.67441.peg.1980
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.67441.peg.404
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67441.peg.405
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.67441.peg.1978
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.67441.peg.1313
Histidine_Biosynthesis	Histidinol dehydrogenase (EC 1.1.1.23)	fig|6666666.67441.peg.1642
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.67441.peg.803
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.67441.peg.1635
Histidine_Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.67441.peg.1641
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	fig|6666666.67441.peg.1637
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	fig|6666666.67441.peg.1634
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.67441.peg.1640
Histidine_Biosynthesis	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.67441.peg.1633
Histidine_Biosynthesis	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.67441.peg.1314
Histidine_Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.67441.peg.1636
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.67441.peg.1176
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.67441.peg.1472
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.67441.peg.1915
Hydrogen-sensing_regulatory_system	Hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.67441.peg.703
Hydrogenases	Ni,Fe-hydrogenase I cytochrome b subunit	fig|6666666.67441.peg.702
Hydrogenases	Uptake hydrogenase large subunit (EC 1.12.99.6)	fig|6666666.67441.peg.701
Hydrogenases	Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	fig|6666666.67441.peg.700
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.67441.peg.2004
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.67441.peg.2003
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.67441.peg.4
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.67441.peg.156
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.67441.peg.1012
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.67441.peg.2124
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.67441.peg.1656
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67441.peg.343
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.67441.peg.1770
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67441.peg.1788
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.67441.peg.477
Inteins	Translation initiation factor 2	fig|6666666.67441.peg.1550
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.184
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.1117
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.67441.peg.1349
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.67441.peg.1984
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.67441.peg.1986
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.67441.peg.1350
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.67441.peg.1352
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.67441.peg.1351
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.67441.peg.1353
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.67441.peg.1347
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.67441.peg.1348
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.67441.peg.1706
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.67441.peg.444
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.67441.peg.1574
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67441.peg.1469
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.67441.peg.1572
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.67441.peg.2024
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67441.peg.2025
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.67441.peg.915
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.67441.peg.979
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.67441.peg.444
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.67441.peg.1800
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.67441.peg.2442
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.67441.peg.1782
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.67441.peg.444
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.67441.peg.1800
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.67441.peg.2442
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.67441.peg.444
Isoprenoinds_for_Quinones	(2E,6Z)-farnesyl diphosphate synthase (EC 2.5.1.68)	fig|6666666.67441.peg.965
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.67441.peg.444
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.444
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.1687
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.67441.peg.444
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.67441.peg.1782
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.67441.peg.1596
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.67441.peg.1597
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.67441.peg.1072
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.67441.peg.1754
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.67441.peg.2312
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.67441.peg.449
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.67441.peg.447
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.67441.peg.448
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.67441.peg.450
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.67441.peg.445
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.67441.peg.446
Lactate_utilization	L-lactate permease	fig|6666666.67441.peg.13
Lactate_utilization	L-lactate permease	fig|6666666.67441.peg.1075
Lactate_utilization	Lactate-responsive regulator LldR in Actinobacteria, GntR family	fig|6666666.67441.peg.12
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.67441.peg.1274
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.67441.peg.1275
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.67441.peg.1276
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.67441.peg.1277
Lactate_utilization	Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	fig|6666666.67441.peg.1278
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.67441.peg.1073
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.67441.peg.1074
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.67441.peg.1072
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.67441.peg.1071
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67441.peg.1488
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.67441.peg.1056
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.67441.peg.1736
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.67441.peg.1055
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67441.peg.1488
Lactose_utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.67441.peg.2170
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.67441.peg.272
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.67441.peg.1177
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.67441.peg.1178
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.67441.peg.1151
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67441.peg.1711
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67441.peg.1711
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.67441.peg.1715
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.384
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.667
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.67441.peg.1285
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.67441.peg.1286
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.67441.peg.176
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.67441.peg.1284
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.67441.peg.1283
Lipid_A_modifications	Sensor protein basS/pmrB (EC 2.7.3.-)	fig|6666666.67441.peg.894
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.67441.peg.1717
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.67441.peg.1716
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.67441.peg.1717
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.67441.peg.1716
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67441.peg.1660
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.67441.peg.1630
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.67441.peg.1494
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.67441.peg.1494
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.67441.peg.1018
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.67441.peg.1020
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.67441.peg.285
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.67441.peg.283
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67441.peg.1077
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.67441.peg.1515
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.67441.peg.1627
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.67441.peg.1013
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67441.peg.1021
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.67441.peg.1115
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.67441.peg.1114
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67441.peg.850
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.67441.peg.1389
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.67441.peg.1390
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.67441.peg.1769
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.67441.peg.1479
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.67441.peg.311
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.67441.peg.589
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.67441.peg.1786
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.67441.peg.1270
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.67441.peg.1040
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.67441.peg.1796
Maltose_and_Maltodextrin_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.67441.peg.543
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.67441.peg.1628
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.67441.peg.546
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.67441.peg.547
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.67441.peg.545
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.67441.peg.550
Maltose_and_Maltodextrin_Utilization	Pullulanase (EC 3.2.1.41)	fig|6666666.67441.peg.937
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.67441.peg.710
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.67441.peg.716
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.67441.peg.714
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.67441.peg.441
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.67441.peg.441
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.67441.peg.438
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.67441.peg.436
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.67441.peg.437
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.67441.peg.435
Mercuric_reductase	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.67441.peg.66
Mercury_resistance_operon	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.67441.peg.66
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.658
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.2076
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.67441.peg.1486
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.67441.peg.1678
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.67441.peg.1677
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.67441.peg.1086
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67441.peg.1686
Methionine_Biosynthesis	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	fig|6666666.67441.peg.1316
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.67441.peg.2271
Methionine_Biosynthesis	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.67441.peg.719
Methionine_Biosynthesis	Cystathionine beta-lyase, type II (EC 4.4.1.8)	fig|6666666.67441.peg.1806
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.67441.peg.1961
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.67441.peg.641
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.67441.peg.1078
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.67441.peg.1079
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.67441.peg.624
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.67441.peg.623
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.67441.peg.625
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.67441.peg.626
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.67441.peg.650
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.67441.peg.650
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.67441.peg.2241
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67441.peg.1382
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.67441.peg.1962
Methionine_Degradation	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.67441.peg.719
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.67441.peg.624
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.67441.peg.623
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.67441.peg.625
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.67441.peg.626
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67441.peg.1758
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.67441.peg.2241
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67441.peg.1382
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.67441.peg.2241
Methionine_Salvage	Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase	fig|6666666.67441.peg.829
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2211
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2222
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2211
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2222
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.67441.peg.1419
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.67441.peg.1521
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67441.peg.2072
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67441.peg.1374
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.67441.peg.510
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.67441.peg.521
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.67441.peg.517
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.67441.peg.519
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.67441.peg.509
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.67441.peg.509
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.67441.peg.520
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.67441.peg.902
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.67441.peg.437
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.67441.peg.307
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.67441.peg.307
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.67441.peg.306
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.67441.peg.305
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.67441.peg.304
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.67441.peg.303
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.67441.peg.302
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.658
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.2076
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.67441.peg.2498
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.67441.peg.459
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67441.peg.460
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.67441.peg.1213
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.67441.peg.1212
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.67441.peg.1211
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.67441.peg.479
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.67441.peg.480
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.67441.peg.481
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.67441.peg.483
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.67441.peg.2378
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.67441.peg.2379
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.67441.peg.2377
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67441.peg.1134
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67441.peg.1488
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67441.peg.1241
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.67441.peg.2378
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.67441.peg.1237
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.67441.peg.1939
NAD_and_NADP_cofactor_biosynthesis_global	Niacin transporter NiaP	fig|6666666.67441.peg.2409
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.67441.peg.1905
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.67441.peg.1923
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.67441.peg.1844
NAD_and_NADP_cofactor_biosynthesis_global	Nudix-related transcriptional regulator NrtR	fig|6666666.67441.peg.2376
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.67441.peg.2379
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.67441.peg.2377
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase	fig|6666666.67441.peg.801
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1)	fig|6666666.67441.peg.799
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1)	fig|6666666.67441.peg.798
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.67441.peg.695
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.67441.peg.706
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.67441.peg.694
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.67441.peg.696
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.67441.peg.697
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.67441.peg.698
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.67441.peg.704
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.67441.peg.699
Niacin-Choline_transport_and_metabolism	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67441.peg.2308
Niacin-Choline_transport_and_metabolism	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67441.peg.2309
Niacin-Choline_transport_and_metabolism	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.67441.peg.2311
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.67441.peg.908
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.67441.peg.2310
Niacin-Choline_transport_and_metabolism	Niacin transporter NiaP	fig|6666666.67441.peg.2409
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.67441.peg.1905
Nitrate_and_nitrite_ammonification	Nitrate/nitrite transporter	fig|6666666.67441.peg.515
Nitrate_and_nitrite_ammonification	Nitrate/nitrite transporter	fig|6666666.67441.peg.516
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.67441.peg.514
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.67441.peg.513
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.67441.peg.512
Nitrate_and_nitrite_ammonification	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.67441.peg.511
Nitrosative_stress	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	fig|6666666.67441.peg.2369
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.67441.peg.1574
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67441.peg.1469
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.67441.peg.1572
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.67441.peg.2024
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67441.peg.2025
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.67441.peg.915
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.67441.peg.979
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.67441.peg.951
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67441.peg.1241
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.67441.peg.1472
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.67441.peg.321
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.67441.peg.1058
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.67441.peg.749
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.67441.peg.750
NusA-TFII_Cluster	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.67441.peg.1551
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.67441.peg.1553
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.67441.peg.1549
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.67441.peg.1552
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.67441.peg.1550
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67441.peg.1686
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67441.peg.900
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.67441.peg.1310
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.67441.peg.637
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.67441.peg.637
Osmoregulation	Glycerol uptake facilitator protein	fig|6666666.67441.peg.2356
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.67441.peg.295
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.67441.peg.2425
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.67441.peg.1494
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.67441.peg.2425
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.67441.peg.2425
Oxidative_stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.67441.peg.2443
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.67441.peg.2381
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.67441.peg.1780
Oxygen_and_light_sensor_PpaA-PpsR	Heme oxygenase (EC 1.14.99.3)	fig|6666666.67441.peg.1731
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.67441.peg.1268
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.67441.peg.1363
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.67441.peg.1361
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.67441.peg.1865
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.67441.peg.938
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.67441.peg.1377
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.67441.peg.1360
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.67441.peg.1359
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.67441.peg.2380
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.67441.peg.1465
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.48
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1571
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67441.peg.1679
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase A (EC 6.3.2.4)	fig|6666666.67441.peg.1181
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.658
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67441.peg.2076
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67441.peg.939
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.67441.peg.1918
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67441.peg.1720
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67441.peg.1733
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.67441.peg.312
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.67441.peg.2415
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.67441.peg.2416
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67441.peg.939
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.67441.peg.1676
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.67441.peg.399
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.67441.peg.1958
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.67441.peg.1673
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.67441.peg.1672
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.67441.peg.1675
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.67441.peg.1678
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.67441.peg.1677
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase A (EC 6.3.2.4)	fig|6666666.67441.peg.1181
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.67441.peg.1672
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.67441.peg.1675
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.67441.peg.1678
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.67441.peg.1677
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.67441.peg.2494
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.67441.peg.29
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.67441.peg.27
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.67441.peg.1573
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.427
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.1449
Persister_Cells	Cell division inhibitor	fig|6666666.67441.peg.1394
Phage_packaging_machinery	Phage terminase large subunit	fig|6666666.67441.peg.2146
Phage_packaging_machinery	Phage terminase large subunit	fig|6666666.67441.peg.2147
Phage_packaging_machinery	Phage terminase large subunit	fig|6666666.67441.peg.2148
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.67441.peg.208
Phage_replication	DNA helicase, phage-associated	fig|6666666.67441.peg.816
Phage_replication	DNA helicase, phage-associated	fig|6666666.67441.peg.1745
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.67441.peg.1656
Phage_tail_proteins_2	Phage tape measure	fig|6666666.67441.peg.221
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.67441.peg.8
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.67441.peg.9
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.67441.peg.248
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.67441.peg.186
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.67441.peg.872
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.67441.peg.2366
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.67441.peg.1980
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.67441.peg.404
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67441.peg.405
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.67441.peg.956
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.67441.peg.2077
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.67441.peg.1980
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.67441.peg.404
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67441.peg.405
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67441.peg.1788
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67441.peg.1788
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.67441.peg.1978
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.67441.peg.2235
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67441.peg.403
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.67441.peg.1842
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.67441.peg.295
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.384
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.667
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.67441.peg.1753
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67441.peg.968
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.1243
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.2500
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.67441.peg.2499
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.67441.peg.1918
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.67441.peg.1540
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.67441.peg.2491
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67441.peg.850
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.67441.peg.956
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.67441.peg.1477
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.67441.peg.2084
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.67441.peg.444
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.444
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.67441.peg.1687
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.67441.peg.444
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.67441.peg.1782
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.742
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.954
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1372
Possible_new_toxin-antitoxin_system_including_DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1907
Possible_new_toxin-antitoxin_system_including_DivIC	FIG004853: possible toxin to DivIC	fig|6666666.67441.peg.955
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.67441.peg.898
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.67441.peg.2008
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.67441.peg.1869
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.67441.peg.2004
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.67441.peg.2004
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.67441.peg.2003
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.67441.peg.2003
Potassium_homeostasis	putative Glutathione-regulated potassium-efflux system protein KefB	fig|6666666.67441.peg.1821
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.67441.peg.805
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.67441.peg.1845
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.67441.peg.1846
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.67441.peg.1622
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.67441.peg.409
Proline_Synthesis	RNA-binding C-terminal domain PUA	fig|6666666.67441.peg.1846
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67441.peg.2123
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.67441.peg.1305
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.67441.peg.1303
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67441.peg.1304
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67441.peg.1302
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.67441.peg.295
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.67441.peg.2443
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.67441.peg.1790
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.67441.peg.2226
Protein_chaperones	Chaperone protein DnaK	fig|6666666.67441.peg.2228
Protein_chaperones	ClpB protein	fig|6666666.67441.peg.2194
Protein_chaperones	ClpB protein	fig|6666666.67441.peg.2197
Protein_chaperones	Heat shock protein GrpE	fig|6666666.67441.peg.2227
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.67441.peg.2225
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.67441.peg.1399
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.67441.peg.1798
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.67441.peg.1858
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.67441.peg.1922
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67441.peg.1860
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67441.peg.1861
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.67441.peg.2036
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.67441.peg.2194
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.67441.peg.2197
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.67441.peg.2030
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.67441.peg.444
Proteorhodopsin	Phytoene dehydrogenase (EC 1.14.99.-)	fig|6666666.67441.peg.1937
Proteorhodopsin	Phytoene synthase (EC 2.5.1.32)	fig|6666666.67441.peg.1936
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.67441.peg.2322
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.67441.peg.2323
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.67441.peg.1246
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.67441.peg.841
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.67441.peg.1426
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.67441.peg.552
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.67441.peg.2001
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.67441.peg.2131
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.67441.peg.610
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.67441.peg.1386
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.67441.peg.2074
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.67441.peg.596
Purine_conversions	Inosine-5'-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205)	fig|6666666.67441.peg.597
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67441.peg.1542
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67441.peg.1824
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67441.peg.2463
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.67441.peg.1852
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.67441.peg.277
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.67441.peg.2126
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 2	fig|6666666.67441.peg.1773
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.67441.peg.978
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.67441.peg.977
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.67441.peg.596
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205)	fig|6666666.67441.peg.597
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.67441.peg.2380
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.67441.peg.2322
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.67441.peg.2323
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67441.peg.1469
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67441.peg.943
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67441.peg.1150
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67441.peg.1367
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.67441.peg.845
Pyridoxin_(Vitamin_B6)_Biosynthesis	Predicted transcriptional regulator of pyridoxine metabolism	fig|6666666.67441.peg.233
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.67441.peg.1785
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	fig|6666666.67441.peg.235
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.67441.peg.234
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.67441.peg.583
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67441.peg.1711
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.67441.peg.503
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.67441.peg.1417
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.67441.peg.502
Pyruvate_Alanine_Serine_Interconversions	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.67441.peg.2002
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3)	fig|6666666.67441.peg.1158
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.67441.peg.2282
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.67441.peg.1172
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.67441.peg.669
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67441.peg.1629
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.67441.peg.2122
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.67441.peg.1606
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2211
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67441.peg.2222
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67441.peg.2123
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67441.peg.1758
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.67441.peg.2014
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67441.peg.2072
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67441.peg.1542
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67441.peg.1824
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67441.peg.2463
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.67441.peg.27
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.67441.peg.606
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.67441.peg.2205
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.67441.peg.2216
Queuosine-Archaeosine_Biosynthesis	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.67441.peg.2464
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.67441.peg.256
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.67441.peg.255
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.67441.peg.1400
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.67441.peg.185
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.67441.peg.1834
RNA_methylation	16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	fig|6666666.67441.peg.1378
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.67441.peg.1188
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.67441.peg.1470
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.67441.peg.2022
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.67441.peg.1028
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.67441.peg.1576
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.67441.peg.1789
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.67441.peg.914
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.67441.peg.2501
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.67441.peg.1595
RNA_methylation	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.67441.peg.1297
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.67441.peg.2283
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.67441.peg.1119
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.1243
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67441.peg.2500
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.67441.peg.2499
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.67441.peg.2501
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.67441.peg.2502
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.67441.peg.2505
RNA_modification_cluster	Protein YidD	fig|6666666.67441.peg.2503
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.67441.peg.2504
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.67441.peg.560
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.67441.peg.459
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67441.peg.460
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.67441.peg.1385
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.67441.peg.1739
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.67441.peg.1881
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.67441.peg.1548
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.67441.peg.1851
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.67441.peg.1609
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.67441.peg.1014
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67441.peg.1251
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.67441.peg.1659
RNA_pseudouridine_syntheses	Similar to ribosomal large subunit pseudouridine synthase D, type RluD4	fig|6666666.67441.peg.1954
RNA_pseudouridine_syntheses	Similar to ribosomal large subunit pseudouridine synthase D, type RluD4	fig|6666666.67441.peg.2397
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.67441.peg.562
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67441.peg.1544
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.67441.peg.1067
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair protein Mre11	fig|6666666.67441.peg.1066
RecA_and_RecX	RecA protein	fig|6666666.67441.peg.1523
RecA_and_RecX	Regulatory protein RecX	fig|6666666.67441.peg.1522
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.67441.peg.2498
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.67441.peg.2275
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67441.peg.10
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67441.peg.6
Respiratory_dehydrogenases_1	Glycerol dehydrogenase (EC 1.1.1.6)	fig|6666666.67441.peg.1964
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.67441.peg.2357
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.67441.peg.128
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.67441.peg.1272
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.67441.peg.2432
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67441.peg.2438
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.67441.peg.2436
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.67441.peg.2437
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.67441.peg.378
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67441.peg.1488
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.67441.peg.379
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.67441.peg.379
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.67441.peg.380
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67441.peg.1374
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.67441.peg.1376
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.67441.peg.1373
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.67441.peg.1376
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.67441.peg.1543
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67441.peg.1374
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.67441.peg.1543
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.67441.peg.1375
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin transporter PnuX	fig|6666666.67441.peg.922
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67441.peg.1374
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.67441.peg.1376
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.67441.peg.1373
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.67441.peg.1376
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.67441.peg.1434
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.67441.peg.1543
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67441.peg.1374
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.67441.peg.1543
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.67441.peg.1375
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin transporter PnuX	fig|6666666.67441.peg.922
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67441.peg.1544
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67441.peg.1374
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.67441.peg.1376
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.67441.peg.1373
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.67441.peg.1313
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.67441.peg.1376
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67441.peg.1374
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.67441.peg.128
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.67441.peg.1272
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.67441.peg.1388
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.67441.peg.1314
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.67441.peg.1375
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.67441.peg.1377
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.67441.peg.1183
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.67441.peg.1397
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.67441.peg.1589
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.67441.peg.1590
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.67441.peg.1590
Ribonucleases_in_Bacillus	Ribonuclease J2 (endoribonuclease in RNA processing)	fig|6666666.67441.peg.1536
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.67441.peg.1935
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.67441.peg.476
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.67441.peg.477
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.67441.peg.1933
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.67441.peg.1930
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.67441.peg.1994
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.67441.peg.1497
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.67441.peg.1934
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.67441.peg.1993
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.67441.peg.479
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.67441.peg.903
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.67441.peg.538
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.67441.peg.449
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.67441.peg.447
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.67441.peg.575
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.67441.peg.499
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.67441.peg.1617
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.67441.peg.540
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.67441.peg.493
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.67441.peg.561
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.67441.peg.537
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.67441.peg.1592
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.67441.peg.448
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.67441.peg.1213
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.67441.peg.1850
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.67441.peg.491
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.67441.peg.488
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.67441.peg.500
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.67441.peg.1616
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.67441.peg.936
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.67441.peg.1849
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.67441.peg.890
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.67441.peg.494
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.67441.peg.489
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.67441.peg.539
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.67441.peg.891
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.67441.peg.891
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.67441.peg.892
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.67441.peg.889
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.67441.peg.889
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.67441.peg.2505
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.67441.peg.1212
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.67441.peg.1938
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.67441.peg.486
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.67441.peg.487
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.67441.peg.501
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.67441.peg.1615
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.67441.peg.536
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.67441.peg.450
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.67441.peg.2411
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.67441.peg.485
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.67441.peg.558
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.67441.peg.479
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.67441.peg.557
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.67441.peg.888
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.67441.peg.888
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.67441.peg.1541
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.67441.peg.1597
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.67441.peg.495
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.67441.peg.887
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.67441.peg.887
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.67441.peg.490
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.67441.peg.1198
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.67441.peg.1835
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.67441.peg.1583
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.67441.peg.492
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.67441.peg.559
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.67441.peg.538
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.67441.peg.2413
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.67441.peg.480
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.67441.peg.535
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.67441.peg.576
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.67441.peg.725
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.67441.peg.1596
Ribosome_biogenesis_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.67441.peg.1851
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.67441.peg.1014
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.67441.peg.1659
Ribosome_biogenesis_bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.67441.peg.588
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.67441.peg.903
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.67441.peg.914
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.67441.peg.1595
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.67441.peg.1580
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.67441.peg.1583
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.67441.peg.1582
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.67441.peg.1433
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.67441.peg.1434
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.67441.peg.1432
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.67441.peg.1431
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.67441.peg.1558
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.67441.peg.327
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67441.peg.1686
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67441.peg.900
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.67441.peg.1341
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.67441.peg.846
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.67441.peg.953
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.67441.peg.1310
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.67441.peg.1624
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.67441.peg.1856
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.67441.peg.637
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.67441.peg.637
Serine-glyoxylate_cycle	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.67441.peg.1331
Serine-glyoxylate_cycle	Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)	fig|6666666.67441.peg.1332
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.67441.peg.685
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.67441.peg.687
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.67441.peg.2295
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67441.peg.968
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.67441.peg.387
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67441.peg.388
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67441.peg.943
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67441.peg.1150
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.67441.peg.845
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.325
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.413
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.1928
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.325
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.413
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67441.peg.1928
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67441.peg.968
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67441.peg.1660
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.67441.peg.339
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.67441.peg.1770
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67441.peg.939
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.67441.peg.533
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67441.peg.939
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.67441.peg.532
Sialic_Acid_Metabolism	N-acetylmannosamine kinase (EC 2.7.1.60)	fig|6666666.67441.peg.530
Sialic_Acid_Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.67441.peg.531
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.67441.peg.578
Sialic_Acid_Metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.67441.peg.347
Sialic_Acid_Metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.67441.peg.554
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.67441.peg.1486
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67441.peg.1660
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.67441.peg.1591
Single-Rhodanese-domain_proteins	Glutathione S-transferase domain protein	fig|6666666.67441.peg.1139
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.67441.peg.2423
Sortase	Sortase A, LPXTG specific	fig|6666666.67441.peg.236
Sortase	Sortase A, LPXTG specific	fig|6666666.67441.peg.239
Sortase	Sortase A, LPXTG specific	fig|6666666.67441.peg.291
Sortase	Sortase A, LPXTG specific	fig|6666666.67441.peg.292
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.932
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.935
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.67441.peg.610
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.67441.peg.591
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.67441.peg.2088
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.67441.peg.625
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.67441.peg.626
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.67441.peg.887
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.67441.peg.810
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.67441.peg.1352
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.67441.peg.2024
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67441.peg.2025
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.742
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.954
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1372
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67441.peg.1907
Stress_related_cluster	Arsenical pump-driving ATPase (EC 3.6.3.16)	fig|6666666.67441.peg.87
Stress_related_cluster	Carbon starvation protein A	fig|6666666.67441.peg.1876
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.67441.peg.1425
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.67441.peg.389
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.67441.peg.386
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.67441.peg.387
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67441.peg.388
Sucrose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.67441.peg.2339
Sucrose_utilization	PTS system, sucrose-specific IIA component (EC 2.7.1.69)	fig|6666666.67441.peg.2341
Sucrose_utilization	PTS system, sucrose-specific IIB component (EC 2.7.1.69)	fig|6666666.67441.peg.2341
Sucrose_utilization	PTS system, sucrose-specific IIC component (EC 2.7.1.69)	fig|6666666.67441.peg.2341
Sucrose_utilization	Sucrose-6-phosphate hydrolase (EC 3.2.1.26)	fig|6666666.67441.peg.2340
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.427
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67441.peg.1449
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.67441.peg.1043
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.67441.peg.1341
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.67441.peg.846
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.384
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67441.peg.667
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.67441.peg.1043
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.67441.peg.974
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.67441.peg.651
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.67441.peg.1856
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.67441.peg.1565
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.67441.peg.387
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67441.peg.388
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67441.peg.2025
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.67441.peg.1695
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.67441.peg.1086
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.67441.peg.1929
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.67441.peg.1704
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.67441.peg.1702
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.67441.peg.1971
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.67441.peg.1972
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.67441.peg.1974
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.67441.peg.1973
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.67441.peg.1971
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.67441.peg.1972
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.67441.peg.1974
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.67441.peg.1973
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.67441.peg.481
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.67441.peg.481
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67441.peg.1469
Thiamin_biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.67441.peg.32
Thiamin_biosynthesis	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.67441.peg.36
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67441.peg.987
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.67441.peg.33
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.67441.peg.35
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.67441.peg.505
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.67441.peg.30
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.67441.peg.31
Thiamin_biosynthesis	Thiaminase II (EC 3.5.99.2)	fig|6666666.67441.peg.36
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.67441.peg.1183
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.67441.peg.34
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67441.peg.990
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.67441.peg.1493
Thioredoxin-disulfide_reductase	Alkylhydroperoxidase protein D	fig|6666666.67441.peg.1492
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.67441.peg.1494
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.67441.peg.1908
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.67441.peg.1420
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.67441.peg.2496
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.67441.peg.2122
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67441.peg.2123
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.67441.peg.502
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67441.peg.2246
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.67441.peg.285
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.67441.peg.283
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.67441.peg.1078
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.67441.peg.1079
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.67441.peg.1728
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.67441.peg.1309
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.67441.peg.2347
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.67441.peg.2346
Transcription_factors_bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.67441.peg.1551
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.67441.peg.1553
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.67441.peg.1593
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.67441.peg.446
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.67441.peg.961
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.67441.peg.1082
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.67441.peg.1552
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.67441.peg.1397
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.67441.peg.947
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.67441.peg.1479
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.67441.peg.1486
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.67441.peg.2495
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.67441.peg.110
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.67441.peg.895
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.78
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.89
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67441.peg.1004
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67441.peg.939
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.67441.peg.936
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67441.peg.939
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.932
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.935
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.67441.peg.938
Transcription_repair_cluster	Short-chain dehydrogenase/reductase SDR	fig|6666666.67441.peg.1880
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.67441.peg.947
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.67441.peg.481
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.67441.peg.1398
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.67441.peg.481
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.67441.peg.1832
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.67441.peg.1398
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.67441.peg.1582
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.67441.peg.483
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.67441.peg.1379
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.67441.peg.1549
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.67441.peg.556
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.67441.peg.1550
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.67441.peg.1211
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67441.peg.553
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67441.peg.1570
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.67441.peg.1083
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.67441.peg.805
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.67441.peg.930
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67441.peg.1380
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67441.peg.2112
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.932
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67441.peg.935
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.67441.peg.1580
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.67441.peg.810
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.67441.peg.1654
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.67441.peg.2004
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.67441.peg.1109
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.67441.peg.1647
Trehalose_Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.67441.peg.1110
Trehalose_Biosynthesis	Trehalose synthase (EC 5.4.99.16)	fig|6666666.67441.peg.544
Trehalose_Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.67441.peg.2020
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.67441.peg.1567
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.67441.peg.2039
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.67441.peg.2039
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.67441.peg.1985
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.67441.peg.2478
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.67441.peg.2477
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.67441.peg.2476
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.67441.peg.1631
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.67441.peg.2479
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.67441.peg.1859
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.67441.peg.2479
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.67441.peg.2484
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67441.peg.2475
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67441.peg.2483
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.67441.peg.1299
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.67441.peg.1037
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.67441.peg.1298
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.67441.peg.1876
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67441.peg.2438
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.67441.peg.2436
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.67441.peg.2437
Type_VI_secretion_systems	ClpB protein	fig|6666666.67441.peg.2194
Type_VI_secretion_systems	ClpB protein	fig|6666666.67441.peg.2197
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.67441.peg.1770
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67441.peg.939
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67441.peg.939
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.67441.peg.578
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.67441.peg.399
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.67441.peg.1958
USS-DB-7	ClpB protein	fig|6666666.67441.peg.2194
USS-DB-7	ClpB protein	fig|6666666.67441.peg.2197
Ubiquinone_Biosynthesis_in_Eucarya	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.67441.peg.438
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.67441.peg.1699
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.67441.peg.1700
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.67441.peg.1701
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.67441.peg.984
Universal_GTPases	GTP-binding protein EngA	fig|6666666.67441.peg.1253
Universal_GTPases	GTP-binding protein Era	fig|6666666.67441.peg.1784
Universal_GTPases	GTP-binding protein HflX	fig|6666666.67441.peg.1512
Universal_GTPases	GTP-binding protein Obg	fig|6666666.67441.peg.1848
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.67441.peg.1008
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.67441.peg.732
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.67441.peg.1603
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.67441.peg.1598
Universal_GTPases	Translation elongation factor G	fig|6666666.67441.peg.481
Universal_GTPases	Translation elongation factor LepA	fig|6666666.67441.peg.1832
Universal_GTPases	Translation elongation factor Tu	fig|6666666.67441.peg.483
Universal_GTPases	Translation initiation factor 2	fig|6666666.67441.peg.1550
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.67441.peg.1465
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.67441.peg.1344
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.67441.peg.1534
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.67441.peg.2424
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.67441.peg.866
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.67441.peg.1184
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.67441.peg.711
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.67441.peg.739
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.67441.peg.313
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.67441.peg.912
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.67441.peg.589
YjeE	NAD(P)HX dehydratase	fig|6666666.67441.peg.2427
YjeE	NAD(P)HX epimerase	fig|6666666.67441.peg.2427
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.67441.peg.2032
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.67441.peg.2023
Zinc_regulated_enzymes	Dihydroorotase (EC 3.5.2.3)	fig|6666666.67441.peg.1391
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67441.peg.2072
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.67441.peg.2498
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.67441.peg.1633
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.67441.peg.418
Zinc_regulated_enzymes	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.67441.peg.1559
Zinc_regulated_enzymes	Zinc uptake regulation protein ZUR	fig|6666666.67441.peg.1780
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.67441.peg.521
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.67441.peg.517
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.67441.peg.519
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67441.peg.1860
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67441.peg.1861
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.67441.peg.1426
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.67441.peg.349
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.67441.peg.2269
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.67441.peg.1152
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.67441.peg.1153
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.67441.peg.317
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 2	fig|6666666.67441.peg.1773
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.67441.peg.378
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.67441.peg.379
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.67441.peg.379
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.67441.peg.709
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.67441.peg.380
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.184
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67441.peg.1117
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.67441.peg.1349
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67441.peg.850
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.376
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.400
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.401
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.1795
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2161
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2162
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67441.peg.2297
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67441.peg.343
pVir_Plasmid_of_Campylobacter	Plasmid partitioning protein ParA	fig|6666666.67441.peg.789
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.67441.peg.2412
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67441.peg.1374
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.67441.peg.1543
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.67441.peg.1543
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.67441.peg.1375
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.67441.peg.1408
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.67441.peg.1076
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.67441.peg.1411
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.67441.peg.1125
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.67441.peg.1135
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.67441.peg.1124
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.67441.peg.1411
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.67441.peg.2023
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.67441.peg.1162
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.67441.peg.1125
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.67441.peg.1135
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.67441.peg.1124
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.67441.peg.1162
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.67441.peg.1778
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.67441.peg.1418
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.67441.peg.1665
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.67441.peg.2444
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.67441.peg.2047
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein	fig|6666666.67441.peg.2248
tRNA_aminoacylation,_Lys	Putative membrane protein found fused to lysyl-tRNA synthetase like protein	fig|6666666.67441.peg.2248
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.67441.peg.911
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.67441.peg.1217
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.67441.peg.1218
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.67441.peg.735
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.67441.peg.1555
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.67441.peg.2360
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.67441.peg.1460
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.67441.peg.656
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.67441.peg.1228
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.67441.peg.1855
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.67441.peg.2491
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.67441.peg.1468
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.67441.peg.2504
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.67441.peg.1916
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.67441.peg.1516
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.67441.peg.562
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67441.peg.1544
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.67441.peg.1521
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.67441.peg.250
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.67441.peg.1834