16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.44
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.279
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.839
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.1321
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.67497.peg.836
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.67497.peg.837
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.67497.peg.1756
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.67497.peg.765
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67497.peg.831
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67497.peg.1765
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67497.peg.1224
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67497.peg.2267
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.67497.peg.382
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67497.peg.2103
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.67497.peg.1043
5-FCL-like_protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.67497.peg.1891
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.67497.peg.1897
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.67497.peg.1787
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.67497.peg.1788
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67497.peg.760
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67497.peg.1704
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67497.peg.2093
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.67497.peg.1012
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.67497.peg.1378
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.67497.peg.145
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.67497.peg.143
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.67497.peg.144
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.67497.peg.91
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.67497.peg.142
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.67497.peg.1016
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.67497.peg.1017
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.67497.peg.1019
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.67497.peg.1018
ATP-dependent_RNA_helicases,_bacterial	ATP-dependent RNA helicase RhlE	fig|6666666.67497.peg.1061
ATP-dependent_RNA_helicases,_bacterial	Cold-shock DEAD-box protein A	fig|6666666.67497.peg.1525
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.67497.peg.1747
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.67497.peg.2068
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.67497.peg.1508
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.67497.peg.1507
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.67497.peg.1732
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67497.peg.1548
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.67497.peg.850
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.67497.peg.2072
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.67497.peg.1451
Acetoin,_butanediol_metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.67497.peg.1450
Acetoin,_butanediol_metabolism	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.67497.peg.601
Acetolactate_synthase_subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.67497.peg.1451
Acetolactate_synthase_subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.67497.peg.1450
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.604
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.714
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.67497.peg.714
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.67497.peg.604
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Acetyl-CoA_fermentation_to_Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.67497.peg.1484
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.67497.peg.1485
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.108
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.366
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.1703
Acetyl-CoA_fermentation_to_Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.2219
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.67497.peg.1207
Acyl-CoA_thioesterase_II	TesB-like acyl-CoA thioesterase 5	fig|6666666.67497.peg.1101
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.67497.peg.1873
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.67497.peg.1934
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67497.peg.799
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.1482
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.2246
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.67497.peg.1129
Alkanesulfonate_assimilation	FMN reductase (EC 1.5.1.29)	fig|6666666.67497.peg.381
Alkanesulfonates_Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.67497.peg.381
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.67497.peg.1850
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67497.peg.90
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67497.peg.571
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67497.peg.572
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67497.peg.1529
Alpha-Amylase_locus_in_Streptocococcus	putative esterase	fig|6666666.67497.peg.2105
Alpha-acetolactate_operon	Alpha-acetolactate decarboxylase (EC 4.1.1.5)	fig|6666666.67497.peg.601
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.67497.peg.798
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.67497.peg.1545
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.67497.peg.664
Ammonia_assimilation	Ammonium transporter	fig|6666666.67497.peg.1359
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.67497.peg.519
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.67497.peg.520
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.67497.peg.773
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.772
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.789
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67497.peg.1367
Anaerobic_respiratory_reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.67497.peg.1412
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.67497.peg.1002
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.67497.peg.1003
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.67497.peg.1005
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.67497.peg.1007
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.67497.peg.1006
Arginine_Biosynthesis_--_gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.67497.peg.1001
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.67497.peg.1000
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.67497.peg.1001
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67497.peg.1548
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.67497.peg.1004
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.67497.peg.1002
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.67497.peg.1003
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.67497.peg.1005
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.67497.peg.1007
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.67497.peg.1006
Arginine_Biosynthesis_extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.67497.peg.1001
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.67497.peg.1000
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.67497.peg.1001
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67497.peg.1548
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.67497.peg.1004
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.67497.peg.1005
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.67497.peg.330
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.67497.peg.1004
Aromatic_amino_acid_degradation	Phenylalanine-specific permease	fig|6666666.67497.peg.1549
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits	fig|6666666.67497.peg.1121
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67497.peg.1367
Arsenic_resistance	Arsenical-resistance protein ACR3	fig|6666666.67497.peg.1366
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1153
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1719
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1812
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.2110
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.67497.peg.198
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.44
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.279
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.839
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.1321
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.67497.peg.1289
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.67497.peg.847
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.67497.peg.45
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.67497.peg.844
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.67497.peg.404
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.67497.peg.848
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.67497.peg.836
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.67497.peg.403
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.67497.peg.670
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.1036
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.2326
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.67497.peg.733
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.67497.peg.1861
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.67497.peg.2143
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.67497.peg.1360
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.67497.peg.837
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.67497.peg.91
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.67497.peg.142
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.67497.peg.1850
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1153
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1719
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1812
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.2110
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.44
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.279
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.839
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.1321
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.67497.peg.1289
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.67497.peg.847
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.67497.peg.45
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.67497.peg.844
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.67497.peg.848
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.67497.peg.836
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.1036
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.2326
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.67497.peg.2325
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.67497.peg.1861
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.67497.peg.2143
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.67497.peg.1036
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.67497.peg.2326
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.67497.peg.2325
Bacterial_hemoglobins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.67497.peg.214
Bacterial_hemoglobins	Hemoglobin-like protein HbO	fig|6666666.67497.peg.663
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.67497.peg.1360
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.67497.peg.1358
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.67497.peg.1179
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.67497.peg.757
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.67497.peg.464
Beta-lactamase	Negative regulator of beta-lactamase expression	fig|6666666.67497.peg.922
Beta-lactamase	Negative regulator of beta-lactamase expression	fig|6666666.67497.peg.1671
Bilin_Biosynthesis	Heme oxygenase (EC 1.14.99.3)	fig|6666666.67497.peg.244
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.67497.peg.1254
Biogenesis_of_c-type_cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.67497.peg.2057
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67497.peg.2058
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.67497.peg.2056
Biogenesis_of_c-type_cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.67497.peg.2059
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.67497.peg.1216
Biogenesis_of_cytochrome_c_oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.67497.peg.763
Biogenesis_of_cytochrome_c_oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.67497.peg.1138
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.605
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.981
Biotin_biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.1779
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.67497.peg.1282
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.67497.peg.52
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.67497.peg.778
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.67497.peg.1858
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67497.peg.53
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.221
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.419
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.449
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.575
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.579
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.723
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.1780
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.2085
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.2249
Biotin_biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.67497.peg.877
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.67497.peg.1281
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.67497.peg.1283
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.67497.peg.52
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.67497.peg.778
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.67497.peg.1826
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.67497.peg.53
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.67497.peg.2183
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.67497.peg.1387
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.67497.peg.1386
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.67497.peg.1441
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.67497.peg.1451
Branched-Chain_Amino_Acid_Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.67497.peg.1450
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67497.peg.799
Branched-Chain_Amino_Acid_Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.67497.peg.1454
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.67497.peg.1449
Branched-Chain_Amino_Acid_Biosynthesis	Threonine dehydratase biosynthetic (EC 4.3.1.19)	fig|6666666.67497.peg.1467
Broadly_distributed_proteins_not_in_subsystems	UPF0028 protein YchK	fig|6666666.67497.peg.1570
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.67497.peg.1189
Butanol_Biosynthesis	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.67497.peg.714
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67497.peg.1224
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67497.peg.2267
Butanol_Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.108
Butanol_Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.366
Butanol_Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.1703
Butanol_Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.2219
Butyrate_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.604
Butyrate_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.714
Butyrate_metabolism_cluster	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Butyrate_metabolism_cluster	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Butyrate_metabolism_cluster	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Butyrate_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.108
Butyrate_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.366
Butyrate_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.1703
Butyrate_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.2219
CBSS-100226.1.peg.2266	FIG006762: Phosphoglycerate mutase family	fig|6666666.67497.peg.768
CBSS-100226.1.peg.2266	FIG042796: Hypothetical protein	fig|6666666.67497.peg.766
CBSS-100226.1.peg.2266	FIG137478: Hypothetical protein	fig|6666666.67497.peg.767
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.67497.peg.1304
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.67497.peg.1305
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.67497.peg.2073
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67497.peg.1300
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.67497.peg.689
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.67497.peg.690
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.67497.peg.224
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.67497.peg.764
CBSS-176280.1.peg.1561	ThiJ/PfpI family protein	fig|6666666.67497.peg.54
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.67497.peg.736
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.67497.peg.1165
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.67497.peg.1195
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.67497.peg.733
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.67497.peg.1369
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.67497.peg.1347
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, ATPase component	fig|6666666.67497.peg.1135
CBSS-196164.1.peg.1690	ABC-type multidrug transport system, permease component	fig|6666666.67497.peg.1136
CBSS-196164.1.peg.1690	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.67497.peg.1138
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.67497.peg.1130
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufB	fig|6666666.67497.peg.1132
CBSS-196164.1.peg.1690	Iron-sulfur cluster assembly protein SufD	fig|6666666.67497.peg.1131
CBSS-196164.1.peg.1690	Iron-sulfur cluster regulator SufR	fig|6666666.67497.peg.1133
CBSS-196164.1.peg.461	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.67497.peg.2057
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67497.peg.2058
CBSS-196164.1.peg.461	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.67497.peg.2056
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.67497.peg.2061
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.67497.peg.697
CBSS-196164.1.peg.461	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.67497.peg.2059
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67497.peg.1034
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.79
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.717
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.777
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.67497.peg.2173
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.67497.peg.1826
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.67497.peg.1508
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.67497.peg.1507
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.67497.peg.869
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.67497.peg.1349
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.605
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.981
CBSS-246196.1.peg.364	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.1779
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.67497.peg.980
CBSS-246196.1.peg.364	Acyl dehydratase	fig|6666666.67497.peg.979
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.67497.peg.164
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.67497.peg.946
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.67497.peg.1647
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.67497.peg.1372
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.67497.peg.1512
CBSS-269482.1.peg.1294	Organic hydroperoxide resistance protein	fig|6666666.67497.peg.2167
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67497.peg.2133
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.67497.peg.1342
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.67497.peg.1041
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67497.peg.640
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.67497.peg.2053
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67497.peg.1320
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67497.peg.1964
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.67497.peg.1339
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.67497.peg.1338
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67497.peg.1040
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.67497.peg.1037
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.67497.peg.1038
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67497.peg.1367
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.67497.peg.313
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.67497.peg.2268
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.67497.peg.2322
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.423
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.451
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.2319
CBSS-316057.3.peg.1308	RNA polymerase sigma-70 factor	fig|6666666.67497.peg.1539
CBSS-316057.3.peg.1308	RNA polymerase sigma-70 factor	fig|6666666.67497.peg.1815
CBSS-316057.3.peg.1308	RNA polymerase sigma-70 factor	fig|6666666.67497.peg.1928
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.67497.peg.773
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.67497.peg.470
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.67497.peg.808
CBSS-316057.3.peg.563	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.67497.peg.811
CBSS-316057.3.peg.563	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.67497.peg.763
CBSS-316057.3.peg.563	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.67497.peg.1138
CBSS-316273.3.peg.2378	FIG006126: DNA helicase, restriction/modification system component YeeB	fig|6666666.67497.peg.1910
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.67497.peg.264
CBSS-316273.3.peg.2378	FIG045374: Type II restriction enzyme, methylase subunit YeeA	fig|6666666.67497.peg.1911
CBSS-316273.3.peg.2378	YeeC-like protein	fig|6666666.67497.peg.1909
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67497.peg.27
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67497.peg.56
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67497.peg.1515
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.67497.peg.1269
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.67497.peg.1341
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.67497.peg.516
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.67497.peg.563
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.67497.peg.1145
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67497.peg.1146
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.67497.peg.875
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.67497.peg.1438
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.67497.peg.1193
CBSS-342610.3.peg.1536	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.67497.peg.1439
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67497.peg.1034
CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.67497.peg.1253
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.67497.peg.749
CBSS-349161.4.peg.2417	FIG042796: Hypothetical protein	fig|6666666.67497.peg.766
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.67497.peg.1246
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.67497.peg.2288
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67497.peg.861
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.67497.peg.1791
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.67497.peg.1476
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.67497.peg.904
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.1482
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.2246
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.67497.peg.1959
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.67497.peg.1830
CBSS-410289.13.peg.3174	Epoxide hydrolase (EC 3.3.2.9)	fig|6666666.67497.peg.2147
CBSS-446462.5.peg.2987	DNA repair protein RecN	fig|6666666.67497.peg.1029
CBSS-446462.5.peg.2987	FIG005773: conserved membrane protein ML1361	fig|6666666.67497.peg.1031
CBSS-446462.5.peg.2987	FIG007481: hypothetical protein	fig|6666666.67497.peg.1032
CBSS-446462.5.peg.2987	NAD kinase (EC 2.7.1.23)	fig|6666666.67497.peg.1028
CBSS-446462.5.peg.2987	RNA binding methyltransferase FtsJ like	fig|6666666.67497.peg.1027
CBSS-479431.5.peg.3955	FIG011121: hypothetical protein	fig|6666666.67497.peg.2155
CBSS-479431.5.peg.3955	FIG137598: hypothetical protein	fig|6666666.67497.peg.2154
CBSS-479431.5.peg.3955	FIG146518: Zn-dependent hydrolases, including glyoxylases	fig|6666666.67497.peg.2153
CBSS-479431.5.peg.3955	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.67497.peg.2152
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.67497.peg.731
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67497.peg.729
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67497.peg.729
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.67497.peg.2169
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.1482
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.2246
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67497.peg.195
CBSS-84588.1.peg.1247	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.67497.peg.1269
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.67497.peg.315
CBSS-89187.3.peg.2957	Glutathione S-transferase domain protein	fig|6666666.67497.peg.1455
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.67497.peg.1160
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67497.peg.175
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67497.peg.1161
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.67497.peg.622
CRISPRs	CRISPR-associated helicase Cas3, protein	fig|6666666.67497.peg.2218
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.67497.peg.2212
CRISPRs	CRISPR-associated protein, Cse1 family	fig|6666666.67497.peg.2217
CRISPRs	CRISPR-associated protein, Cse2 family	fig|6666666.67497.peg.2216
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.67497.peg.1033
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.67497.peg.2329
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.67497.peg.1687
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.67497.peg.303
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67497.peg.1148
Calvin-Benson_cycle	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.67497.peg.1044
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67497.peg.1147
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.67497.peg.666
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.67497.peg.1158
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.67497.peg.1139
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67497.peg.1146
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.67497.peg.1795
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.67497.peg.755
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.67497.peg.2049
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.67497.peg.172
Carotenoids	Phytoene dehydrogenase and related proteins	fig|6666666.67497.peg.829
Catechol_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.67497.peg.485
Catechol_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.67497.peg.486
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1153
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1719
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1812
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.2110
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.67497.peg.198
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.67497.peg.197
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1735
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1738
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.67497.peg.871
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.67497.peg.977
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.67497.peg.1349
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.67497.peg.1728
Cell_division_cluster_containing_FtsZ_and_FtsW	COG1496: Uncharacterized conserved protein	fig|6666666.67497.peg.849
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsQ	fig|6666666.67497.peg.847
Cell_division_cluster_containing_FtsZ_and_FtsW	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.67497.peg.848
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021292: hypothetical protein	fig|6666666.67497.peg.851
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG021764: Possible membrane protein	fig|6666666.67497.peg.852
Cell_division_cluster_containing_FtsZ_and_FtsW	FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria	fig|6666666.67497.peg.853
Cell_division_cluster_containing_FtsZ_and_FtsW	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.67497.peg.850
Cell_division_cluster_containing_FtsZ_and_FtsW	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.67497.peg.846
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.67497.peg.555
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.67497.peg.1843
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.67497.peg.614
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67497.peg.1350
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.67497.peg.1352
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Glycine betaine transporter OpuD	fig|6666666.67497.peg.1755
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.67497.peg.1351
Choline_uptake_and_conversion_to_betaine_clusters	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67497.peg.1350
Choline_uptake_and_conversion_to_betaine_clusters	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.67497.peg.1352
Choline_uptake_and_conversion_to_betaine_clusters	High-affinity choline uptake protein BetT	fig|6666666.67497.peg.1351
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.67497.peg.128
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.67497.peg.810
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.67497.peg.41
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.67497.peg.890
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.67497.peg.892
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.67497.peg.1436
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.67497.peg.36
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.67497.peg.41
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.67497.peg.36
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.67497.peg.886
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.67497.peg.894
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67497.peg.893
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.67497.peg.825
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.67497.peg.1177
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.67497.peg.1178
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.67497.peg.1817
Chorismate_Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.67497.peg.2236
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.67497.peg.1792
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.67497.peg.1180
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.67497.peg.559
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.67497.peg.1182
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.67497.peg.1179
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.67497.peg.1092
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	FIG005666: putative helicase	fig|6666666.67497.peg.1085
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Prokaryotic ubiquitin-like protein Pup	fig|6666666.67497.peg.1090
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67497.peg.1091
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67497.peg.1089
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.67497.peg.1087
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.67497.peg.1086
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.67497.peg.1185
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.67497.peg.1183
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.67497.peg.1182
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.67497.peg.800
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.67497.peg.2288
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.67497.peg.771
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.67497.peg.212
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.67497.peg.985
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.67497.peg.1449
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67497.peg.206
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.67497.peg.1705
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.67497.peg.1372
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.67497.peg.1164
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.67497.peg.1164
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.67497.peg.771
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.67497.peg.212
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67497.peg.206
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.79
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.717
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.777
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.67497.peg.2134
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspC	fig|6666666.67497.peg.349
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.67497.peg.825
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.67497.peg.1177
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.67497.peg.1178
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.67497.peg.1817
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.67497.peg.1180
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.67497.peg.1182
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.67497.peg.1179
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.67497.peg.234
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.67497.peg.110
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.67497.peg.2151
Copper_Transport_System	Copper resistance protein CopC	fig|6666666.67497.peg.1218
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67497.peg.753
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67497.peg.1596
Copper_homeostasis	Copper chaperone	fig|6666666.67497.peg.647
Copper_homeostasis	Copper resistance protein CopC	fig|6666666.67497.peg.1218
Copper_homeostasis	Copper resistance protein D	fig|6666666.67497.peg.657
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67497.peg.753
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.67497.peg.1596
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.67497.peg.225
Cysteine_Biosynthesis	Cystathionine beta-synthase (EC 4.2.1.22)	fig|6666666.67497.peg.28
Cysteine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.67497.peg.499
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.67497.peg.55
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.67497.peg.109
Cysteine_Biosynthesis	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.67497.peg.157
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.67497.peg.110
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.67497.peg.159
Cysteine_Biosynthesis	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.67497.peg.158
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.67497.peg.57
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.67497.peg.161
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67497.peg.1461
D-gluconate_and_ketogluconates_metabolism	2,5-diketo-D-gluconate reductase A (EC 1.1.1.274)	fig|6666666.67497.peg.365
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.67497.peg.1062
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.67497.peg.119
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.67497.peg.2298
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.67497.peg.666
D-tyrosyl-tRNA(Tyr)_deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.67497.peg.1253
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.67497.peg.1476
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.67497.peg.958
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.67497.peg.975
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.67497.peg.1633
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.67497.peg.516
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	fig|6666666.67497.peg.82
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.67497.peg.2151
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.67497.peg.147
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.67497.peg.387
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.67497.peg.1368
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.67497.peg.1377
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67497.peg.7
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67497.peg.5
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.67497.peg.2190
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.67497.peg.2189
DNA_processing_cluster	Recombination protein RecR	fig|6666666.67497.peg.2188
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.67497.peg.992
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.67497.peg.986
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.67497.peg.1152
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.67497.peg.224
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.67497.peg.857
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.67497.peg.227
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.67497.peg.1029
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.67497.peg.508
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.67497.peg.173
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.67497.peg.1888
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.67497.peg.1684
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.67497.peg.1685
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.67497.peg.904
DNA_repair,_bacterial	RecA protein	fig|6666666.67497.peg.1279
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.67497.peg.1264
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.67497.peg.2276
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.67497.peg.457
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.67497.peg.1806
DNA_repair,_bacterial_RecBCD_pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.67497.peg.1805
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.67497.peg.3
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.67497.peg.736
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.67497.peg.1279
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.67497.peg.2188
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.67497.peg.2276
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.67497.peg.1279
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.67497.peg.1264
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.67497.peg.1791
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.67497.peg.1803
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.67497.peg.2285
DNA_repair,_bacterial_photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.67497.peg.2292
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.67497.peg.1279
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.67497.peg.1278
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.67497.peg.1346
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.67497.peg.1
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67497.peg.7
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67497.peg.5
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.67497.peg.2
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.67497.peg.3
DNA_replication_cluster_1	FIG002958: hypothetical protein	fig|6666666.67497.peg.522
DNA_replication_cluster_1	FIG187021: hypothetical protein	fig|6666666.67497.peg.8
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.67497.peg.871
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.67497.peg.4
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.67497.peg.1362
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67497.peg.2133
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67497.peg.7
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67497.peg.5
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.67497.peg.146
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.67497.peg.133
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.67497.peg.1787
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.67497.peg.148
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.67497.peg.1856
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.67497.peg.1855
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.67497.peg.141
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.67497.peg.1787
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.67497.peg.132
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.67497.peg.138
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.67497.peg.137
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.67497.peg.136
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.67497.peg.1788
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.67497.peg.287
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.67497.peg.1732
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.67497.peg.1172
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.67497.peg.1169
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.67497.peg.1170
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.67497.peg.1171
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.67497.peg.1107
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.67497.peg.308
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.67497.peg.1168
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.67497.peg.1173
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.67497.peg.1173
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.67497.peg.1876
DedA_family_of_inner_membrane_proteins	DedA family protein paralog	fig|6666666.67497.peg.1109
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.67497.peg.1511
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.67497.peg.1531
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.67497.peg.798
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.67497.peg.1545
Dehydrogenase_complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.67497.peg.796
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.67497.peg.1531
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67497.peg.760
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.67497.peg.415
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.67497.peg.2089
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.67497.peg.1873
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.67497.peg.2298
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.67497.peg.1244
Di-Inositol-Phosphate_biosynthesis	Inositol-1-phosphate synthase (EC 5.5.1.4)	fig|6666666.67497.peg.2282
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67497.peg.1312
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67497.peg.2066
EC699-706	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.67497.peg.784
EC699-706	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.67497.peg.784
EC699-706	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.67497.peg.2285
EC699-706	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.67497.peg.2292
EC699-706	Lactam utilization protein LamB	fig|6666666.67497.peg.785
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.67497.peg.1282
ECF_class_transporters	ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter	fig|6666666.67497.peg.290
ECF_class_transporters	ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter	fig|6666666.67497.peg.290
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.67497.peg.371
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.67497.peg.1581
ECF_class_transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67497.peg.1904
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.67497.peg.373
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.67497.peg.1583
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.67497.peg.1281
ECF_class_transporters	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.67497.peg.292
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67497.peg.1427
ECF_class_transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67497.peg.1905
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.67497.peg.372
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.67497.peg.1582
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.67497.peg.1283
ECF_class_transporters	Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter	fig|6666666.67497.peg.291
ECF_class_transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67497.peg.1903
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.67497.peg.1143
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.67497.peg.1720
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.67497.peg.119
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.67497.peg.1141
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67497.peg.1148
Entner-Doudoroff_Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.67497.peg.1142
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67497.peg.1147
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67497.peg.2079
Entner-Doudoroff_Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.67497.peg.1245
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67497.peg.896
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.67497.peg.164
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67497.peg.163
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.67497.peg.980
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.67497.peg.577
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.67497.peg.1859
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.67497.peg.577
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.67497.peg.1859
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.67497.peg.783
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.67497.peg.1866
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.67497.peg.783
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.67497.peg.1866
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.67497.peg.576
Fatty_acid_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.604
Fatty_acid_metabolism_cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.714
Fatty_acid_metabolism_cluster	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.67497.peg.604
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.605
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.981
Fatty_acid_metabolism_cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.1779
Fatty_acid_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.108
Fatty_acid_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.366
Fatty_acid_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.1703
Fatty_acid_metabolism_cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.2219
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.221
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.419
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.449
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.575
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.579
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.723
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.1780
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.2085
Fatty_acid_metabolism_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.2249
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.67497.peg.164
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.67497.peg.551
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67497.peg.163
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.67497.peg.164
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67497.peg.1224
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.67497.peg.2267
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.67497.peg.551
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67497.peg.163
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.423
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.451
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.2319
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.67497.peg.1246
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.423
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.451
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.2319
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.44
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.279
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.839
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.1321
Flavohaemoglobin	ABC-type Fe3+-siderophore transport system, permease 2 component	fig|6666666.67497.peg.1613
Flavohaemoglobin	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.67497.peg.214
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.67497.peg.202
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67497.peg.1765
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.67497.peg.128
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.67497.peg.382
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.67497.peg.679
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.67497.peg.201
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.67497.peg.200
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.67497.peg.679
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67497.peg.199
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.67497.peg.36
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.67497.peg.41
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.67497.peg.36
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.67497.peg.383
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.67497.peg.1294
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.67497.peg.202
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.67497.peg.212
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.67497.peg.198
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.67497.peg.201
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.67497.peg.200
Folate_biosynthesis_cluster	FIG027937: secreted protein	fig|6666666.67497.peg.203
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67497.peg.199
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.67497.peg.197
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.67497.peg.206
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.67497.peg.1140
Fructose_utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.67497.peg.1265
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.67497.peg.1446
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.67497.peg.2226
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.67497.peg.233
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.67497.peg.1437
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.67497.peg.806
Glutamate_and_Aspartate_uptake_in_Bacteria	Sodium/glutamate symport protein	fig|6666666.67497.peg.491
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.67497.peg.1355
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.67497.peg.806
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.79
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.717
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.777
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.67497.peg.1097
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.67497.peg.463
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.67497.peg.519
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.67497.peg.520
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.67497.peg.905
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.772
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.789
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.67497.peg.858
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.67497.peg.1355
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.772
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.789
Glutaredoxins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.67497.peg.214
Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.67497.peg.441
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.67497.peg.1193
Glutathione:_Redox_cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.67497.peg.441
Glutathione_analogs:_mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.67497.peg.124
Glutathione_analogs:_mycothiol	Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	fig|6666666.67497.peg.751
Glutathione_analogs:_mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.67497.peg.2084
Glutathione_analogs:_mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.67497.peg.1104
Glutathione_analogs:_mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.67497.peg.1708
Glutathione_analogs:_mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.67497.peg.1555
Glutathione_analogs:_mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.67497.peg.1315
Glutathione_analogs:_mycothiol	Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR	fig|6666666.67497.peg.752
Glutathione_analogs:_mycothiol	S-nitrosomycothiol reductase MscR	fig|6666666.67497.peg.751
Glutathione_analogs:_mycothiol	Uncharacterized protein Rv0487/MT0505 clustered with mycothiol biosynthesis gene	fig|6666666.67497.peg.2080
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67497.peg.896
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.67497.peg.1868
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.67497.peg.1869
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.67497.peg.2118
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.67497.peg.1384
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.67497.peg.553
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67497.peg.1704
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.67497.peg.315
Glycine_and_Serine_Utilization	Cystathionine beta-synthase (EC 4.2.1.22)	fig|6666666.67497.peg.28
Glycine_and_Serine_Utilization	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.67497.peg.499
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67497.peg.1445
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.67497.peg.313
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.67497.peg.316
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.67497.peg.1744
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.67497.peg.358
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.448
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.2070
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.2144
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67497.peg.1704
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.67497.peg.563
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.67497.peg.315
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67497.peg.2103
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.67497.peg.313
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.67497.peg.316
Glycine_cleavage_system	Sodium/glycine symporter GlyP	fig|6666666.67497.peg.420
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.67497.peg.2268
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.67497.peg.2322
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.67497.peg.2320
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.67497.peg.1490
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.67497.peg.722
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.67497.peg.1541
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.67497.peg.876
Glycogen_metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.67497.peg.1542
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.67497.peg.765
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67497.peg.1461
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.67497.peg.1720
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.67497.peg.1687
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.67497.peg.303
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.67497.peg.394
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67497.peg.1148
Glycolysis_and_Gluconeogenesis	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	fig|6666666.67497.peg.1044
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67497.peg.1147
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67497.peg.2079
Glycolysis_and_Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.67497.peg.1245
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67497.peg.896
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67497.peg.1146
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67497.peg.1461
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.67497.peg.1720
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.67497.peg.1687
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.67497.peg.394
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.67497.peg.1147
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67497.peg.2079
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67497.peg.896
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.67497.peg.1146
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.67497.peg.736
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.67497.peg.733
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.67497.peg.742
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.67497.peg.731
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67497.peg.729
Glycyl-tRNA_synthetase_containing_cluster	Zinc uptake regulation protein ZUR	fig|6666666.67497.peg.740
Glyoxylate_bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.67497.peg.1116
Glyoxylate_bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.67497.peg.359
Glyoxylate_bypass	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.67497.peg.2100
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.67497.peg.676
Glyoxylate_bypass	Malate synthase G (EC 2.3.3.9)	fig|6666666.67497.peg.2098
Glyoxylate_bypass_cluster	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.67497.peg.2100
Glyoxylate_bypass_cluster	Malate synthase G (EC 2.3.3.9)	fig|6666666.67497.peg.2098
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.67497.peg.333
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.67497.peg.727
GroEL_GroES	Chaperone protein DnaK	fig|6666666.67497.peg.96
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.67497.peg.181
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.67497.peg.1930
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.67497.peg.1931
GroEL_GroES	Heat shock protein GrpE	fig|6666666.67497.peg.97
GroEL_GroES	Heat-inducible transcription repressor HrcA	fig|6666666.67497.peg.726
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.67497.peg.333
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.67497.peg.727
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.67497.peg.96
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.67497.peg.97
Heat_shock_dnaK_gene_cluster_extended	Heat-inducible transcription repressor HrcA	fig|6666666.67497.peg.726
Heat_shock_dnaK_gene_cluster_extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.67497.peg.332
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.67497.peg.466
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.67497.peg.465
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.67497.peg.728
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.67497.peg.871
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.67497.peg.705
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.67497.peg.1756
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.67497.peg.405
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.67497.peg.1485
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	fig|6666666.67497.peg.1982
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, ATPase component HmuV	fig|6666666.67497.peg.242
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT	fig|6666666.67497.peg.240
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme ABC transporter, permease protein HmuU	fig|6666666.67497.peg.241
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Heme oxygenase (EC 1.14.99.3)	fig|6666666.67497.peg.244
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin, heme-dependent two component system response regulator ChrA	fig|6666666.67497.peg.1847
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS	fig|6666666.67497.peg.1848
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemoglobin-dependent two component system response regulator HrrA	fig|6666666.67497.peg.1322
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron-dependent repressor IdeR/DtxR	fig|6666666.67497.peg.1255
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.67497.peg.434
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Sortase A, LPXTG specific	fig|6666666.67497.peg.437
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.67497.peg.2170
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.67497.peg.2061
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.67497.peg.2068
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.67497.peg.1416
Heme_and_Siroheme_Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.67497.peg.1572
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.67497.peg.2067
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.67497.peg.2065
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.67497.peg.1232
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.67497.peg.1526
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.67497.peg.1233
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67497.peg.1312
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.67497.peg.2066
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.67497.peg.2066
Hfl_operon	GTP-binding protein HflX	fig|6666666.67497.peg.1267
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.67497.peg.123
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.67497.peg.2078
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67497.peg.1770
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67497.peg.2077
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.67497.peg.120
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.67497.peg.121
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.67497.peg.122
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.67497.peg.118
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.67497.peg.1098
Histidine_Biosynthesis	Histidinol dehydrogenase (EC 1.1.1.23)	fig|6666666.67497.peg.881
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.67497.peg.398
Histidine_Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.67497.peg.887
Histidine_Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.67497.peg.882
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	fig|6666666.67497.peg.885
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	fig|6666666.67497.peg.888
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.67497.peg.883
Histidine_Biosynthesis	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.67497.peg.889
Histidine_Biosynthesis	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.67497.peg.1099
Histidine_Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.67497.peg.886
Histidine_Degradation	Formiminoglutamase (EC 3.5.3.8)	fig|6666666.67497.peg.2256
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.67497.peg.2260
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.67497.peg.2258
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.67497.peg.2259
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.67497.peg.1388
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.67497.peg.2257
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.67497.peg.1241
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.67497.peg.466
Hypothetical_Coupled_to_RecF	DNA recombination and repair protein RecF	fig|6666666.67497.peg.3
Hypothetical_Coupled_to_RecF	FIG002958: hypothetical protein	fig|6666666.67497.peg.522
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.67497.peg.1553
Inorganic_Sulfur_Assimilation	Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	fig|6666666.67497.peg.157
Inorganic_Sulfur_Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.67497.peg.284
Inorganic_Sulfur_Assimilation	Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	fig|6666666.67497.peg.283
Inorganic_Sulfur_Assimilation	Ferredoxin-like protein involved in electron transfer	fig|6666666.67497.peg.282
Inorganic_Sulfur_Assimilation	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.67497.peg.157
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.67497.peg.159
Inorganic_Sulfur_Assimilation	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.67497.peg.158
Inorganic_Sulfur_Assimilation	Sulfate transporter, CysZ-type	fig|6666666.67497.peg.161
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.67497.peg.866
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.67497.peg.1908
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67497.peg.2133
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.67497.peg.1936
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67497.peg.729
Inteins	Translation initiation factor 2	fig|6666666.67497.peg.1305
Inteins	Translation initiation factor 2	fig|6666666.67497.peg.2073
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.1482
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.2246
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.67497.peg.1129
Iron-sulfur_cluster_assembly	DUF1794	fig|6666666.67497.peg.127
Iron-sulfur_cluster_assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.67497.peg.129
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.67497.peg.1130
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.67497.peg.1132
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.67497.peg.1131
Iron-sulfur_cluster_assembly	Iron-sulfur cluster regulator SufR	fig|6666666.67497.peg.1133
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.67497.peg.1127
Iron-sulfur_cluster_assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.67497.peg.1128
Iron-sulfur_cluster_assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.67497.peg.802
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.67497.peg.1328
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67497.peg.1237
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.67497.peg.1326
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.67497.peg.231
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67497.peg.230
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.67497.peg.1747
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.67497.peg.1683
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.67497.peg.2030
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.67497.peg.1354
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.67497.peg.1356
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.67497.peg.2307
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.67497.peg.764
LOS_core_oligosaccharide_biosynthesis	Beta-1,3-glucosyltransferase	fig|6666666.67497.peg.625
LOS_core_oligosaccharide_biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.67497.peg.567
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.67497.peg.2015
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.67497.peg.2007
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.67497.peg.2008
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.67497.peg.2016
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.67497.peg.2005
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.67497.peg.2006
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.67497.peg.2308
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.67497.peg.2307
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.67497.peg.2306
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67497.peg.640
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.67497.peg.2226
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.67497.peg.211
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.67497.peg.210
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67497.peg.640
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.67497.peg.2226
Lanthionine_Synthetases	Lanthionine biosynthesis protein LanL	fig|6666666.67497.peg.1977
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.67497.peg.622
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.67497.peg.2183
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.67497.peg.1387
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.67497.peg.1386
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.67497.peg.1441
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67497.peg.799
Lipid-linked_oligosaccharide_synthesis_related_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.67497.peg.1081
Lipid-linked_oligosaccharide_synthesis_related_cluster	Cytoplasmic membrane protein FsxA	fig|6666666.67497.peg.1082
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.67497.peg.1080
Lipid-linked_oligosaccharide_synthesis_related_cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.67497.peg.2109
Lipid-linked_oligosaccharide_synthesis_related_cluster	FIG00820327: hypothetical protein	fig|6666666.67497.peg.1077
Lipid_A_modifications	Sensor protein basS/pmrB (EC 2.7.3.-)	fig|6666666.67497.peg.1769
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.67497.peg.794
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.67497.peg.795
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.67497.peg.794
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.67497.peg.795
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67497.peg.861
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.67497.peg.895
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.67497.peg.1259
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.67497.peg.1259
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.67497.peg.1550
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.67497.peg.2172
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.67497.peg.2173
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67497.peg.27
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67497.peg.56
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.67497.peg.1515
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.67497.peg.1269
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.67497.peg.897
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.67497.peg.1552
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.67497.peg.1548
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.67497.peg.714
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.67497.peg.1484
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.67497.peg.1485
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.108
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.366
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.1703
Lysine_fermentation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.2219
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.67497.peg.731
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.67497.peg.755
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.67497.peg.722
Maltose_and_Maltodextrin_Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.67497.peg.2097
Maltose_and_Maltodextrin_Utilization	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.67497.peg.873
Maltose_and_Maltodextrin_Utilization	Maltose phosphorylase (EC 2.4.1.8)	fig|6666666.67497.peg.2096
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.67497.peg.1851
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.67497.peg.1852
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.67497.peg.1850
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.67497.peg.1849
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	fig|6666666.67497.peg.1840
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.67497.peg.1835
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.67497.peg.414
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.67497.peg.1836
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.67497.peg.1874
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.67497.peg.2032
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.67497.peg.2035
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.67497.peg.2037
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.67497.peg.2036
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.67497.peg.2041
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.67497.peg.2032
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67497.peg.195
Methicillin_resistance_in_Staphylococci	RNA polymerase sigma factor SigB	fig|6666666.67497.peg.1254
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.67497.peg.840
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.67497.peg.841
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.67497.peg.1505
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67497.peg.831
Methionine_Biosynthesis	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	fig|6666666.67497.peg.1102
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.67497.peg.293
Methionine_Biosynthesis	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.67497.peg.1831
Methionine_Biosynthesis	Cystathionine beta-synthase (EC 4.2.1.22)	fig|6666666.67497.peg.28
Methionine_Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.67497.peg.499
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.67497.peg.55
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.67497.peg.109
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.67497.peg.1895
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.67497.peg.1513
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.67497.peg.1512
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.67497.peg.1325
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.67497.peg.1914
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.67497.peg.1915
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.67497.peg.1913
Methionine_Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.67497.peg.1894
Methionine_Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.67497.peg.1894
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67497.peg.947
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67497.peg.1163
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67497.peg.1646
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.67497.peg.110
Methionine_Degradation	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.67497.peg.1831
Methionine_Degradation	Cystathionine beta-synthase (EC 4.2.1.22)	fig|6666666.67497.peg.28
Methionine_Degradation	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.67497.peg.499
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.67497.peg.1325
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.67497.peg.1914
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.67497.peg.1915
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.67497.peg.1913
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67497.peg.760
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67497.peg.947
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67497.peg.1163
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.67497.peg.1646
Methylcitrate_cycle	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.67497.peg.1863
Methylcitrate_cycle	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.67497.peg.1862
Methylcitrate_cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.67497.peg.1116
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.33
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.321
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.1713
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.33
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.321
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.1713
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.67497.peg.1193
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.67497.peg.1273
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.67497.peg.2036
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.67497.peg.2161
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.67497.peg.2161
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.67497.peg.2162
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.67497.peg.2163
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.67497.peg.2164
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.67497.peg.2165
Multi-subunit_cation_antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.67497.peg.2166
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67497.peg.195
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.67497.peg.2323
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.67497.peg.2018
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67497.peg.1389
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67497.peg.2019
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67497.peg.2242
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.67497.peg.995
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.67497.peg.994
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.67497.peg.993
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.67497.peg.2023
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.67497.peg.2024
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.67497.peg.2025
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.67497.peg.2026
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.67497.peg.1461
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.67497.peg.614
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.67497.peg.2097
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67497.peg.640
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67497.peg.1034
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.67497.peg.1286
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.67497.peg.1286
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.67497.peg.1028
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.67497.peg.439
NAD_and_NADP_cofactor_biosynthesis_global	Niacin transporter NiaP	fig|6666666.67497.peg.246
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.67497.peg.458
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.67497.peg.695
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.67497.peg.2221
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.67497.peg.2220
Niacin-Choline_transport_and_metabolism	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.67497.peg.1350
Niacin-Choline_transport_and_metabolism	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.67497.peg.1352
Niacin-Choline_transport_and_metabolism	Glycine betaine transporter OpuD	fig|6666666.67497.peg.1755
Niacin-Choline_transport_and_metabolism	High-affinity choline uptake protein BetT	fig|6666666.67497.peg.1351
Niacin-Choline_transport_and_metabolism	Niacin transporter NiaP	fig|6666666.67497.peg.246
Nitrosative_stress	Nitrite-sensitive transcriptional repressor NsrR	fig|6666666.67497.peg.213
Nitrosative_stress	Nitrite-sensitive transcriptional repressor NsrR	fig|6666666.67497.peg.1754
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.67497.peg.1328
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67497.peg.1237
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.67497.peg.1326
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.67497.peg.231
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67497.peg.230
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.67497.peg.1747
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.67497.peg.1683
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.67497.peg.1726
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.67497.peg.1727
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.67497.peg.1034
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.67497.peg.1241
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.67497.peg.2149
NusA-TFII_Cluster	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.67497.peg.1306
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.67497.peg.1304
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.67497.peg.1307
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.67497.peg.1305
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.67497.peg.2073
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67497.peg.831
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67497.peg.1765
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.67497.peg.1043
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.67497.peg.1897
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.67497.peg.1897
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.67497.peg.1737
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.67497.peg.1259
Oxidative_stress	Nitrite-sensitive transcriptional repressor NsrR	fig|6666666.67497.peg.213
Oxidative_stress	Nitrite-sensitive transcriptional repressor NsrR	fig|6666666.67497.peg.1754
Oxidative_stress	Organic hydroperoxide resistance protein	fig|6666666.67497.peg.2167
Oxidative_stress	Redox-sensitive transcriptional activator SoxR	fig|6666666.67497.peg.1622
Oxidative_stress	Superoxide dismutase [Mn] (EC 1.15.1.1)	fig|6666666.67497.peg.550
Oxidative_stress	Zinc uptake regulation protein ZUR	fig|6666666.67497.peg.740
Oxygen_and_light_sensor_PpaA-PpsR	Heme oxygenase (EC 1.14.99.3)	fig|6666666.67497.peg.244
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.67497.peg.1062
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.67497.peg.1143
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.67497.peg.1141
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.67497.peg.666
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.67497.peg.1732
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.67497.peg.1158
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.67497.peg.1140
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.67497.peg.1139
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.67497.peg.548
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.67497.peg.1231
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.44
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.279
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.839
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.67497.peg.1321
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.67497.peg.1383
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.67497.peg.195
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67497.peg.1731
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.67497.peg.463
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.772
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.67497.peg.789
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.67497.peg.2157
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.67497.peg.2279
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.67497.peg.2280
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67497.peg.1731
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.67497.peg.842
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.67497.peg.2086
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.67497.peg.105
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.67497.peg.845
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.67497.peg.846
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.67497.peg.843
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.67497.peg.840
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.67497.peg.841
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.67497.peg.1383
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.67497.peg.846
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.67497.peg.843
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.67497.peg.840
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.67497.peg.841
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.67497.peg.2318
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	FIG056164: rhomboid family serine protease	fig|6666666.67497.peg.39
Peptidyl-prolyl_cis-trans_isomerase_containing_cluster	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.67497.peg.38
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67497.peg.2058
Persister_Cells	Cell division inhibitor	fig|6666666.67497.peg.2169
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.67497.peg.937
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.67497.peg.1657
Phage_packaging_machinery	Phage portal protein	fig|6666666.67497.peg.939
Phage_packaging_machinery	Phage portal protein	fig|6666666.67497.peg.1655
Phage_packaging_machinery	Phage terminase large subunit	fig|6666666.67497.peg.940
Phage_packaging_machinery	Phage terminase large subunit	fig|6666666.67497.peg.1654
Phage_replication	DNA helicase, phage-associated	fig|6666666.67497.peg.952
Phage_replication	DNA helicase, phage-associated	fig|6666666.67497.peg.1639
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.67497.peg.866
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.67497.peg.1908
Phage_replication	DNA primase/helicase, phage-associated	fig|6666666.67497.peg.954
Phage_replication	DNA primase/helicase, phage-associated	fig|6666666.67497.peg.1637
Phage_tail_proteins_2	Phage tape measure	fig|6666666.67497.peg.929
Phage_tail_proteins_2	Phage tape measure	fig|6666666.67497.peg.1665
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.67497.peg.2236
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.67497.peg.2239
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.67497.peg.1792
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.67497.peg.559
PhoR-PhoB_two-component_regulatory_system	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.67497.peg.123
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.67497.peg.2078
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67497.peg.1770
PhoR-PhoB_two-component_regulatory_system	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67497.peg.2077
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.67497.peg.1410
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.67497.peg.1718
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.67497.peg.2074
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.67497.peg.194
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.67497.peg.123
Phosphate_metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.67497.peg.2078
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67497.peg.1770
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.67497.peg.2077
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67497.peg.729
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.67497.peg.729
Phosphate_metabolism	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.67497.peg.120
Phosphate_metabolism	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.67497.peg.121
Phosphate_metabolism	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.67497.peg.122
Phosphate_metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.67497.peg.118
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.67497.peg.1693
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.67497.peg.218
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.67497.peg.219
Phosphate_metabolism	secreted alkaline phosphatase	fig|6666666.67497.peg.504
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.67497.peg.2079
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.67497.peg.315
Photorespiration_(oxidative_C2_cycle)	Catalase (EC 1.11.1.6)	fig|6666666.67497.peg.1737
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67497.peg.2103
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.67497.peg.313
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.67497.peg.316
Photorespiration_(oxidative_C2_cycle)	Malate synthase G (EC 2.3.3.9)	fig|6666666.67497.peg.2098
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.67497.peg.765
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67497.peg.1704
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.1036
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.2326
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.67497.peg.2325
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.67497.peg.1296
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.67497.peg.2313
Polyamine_Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.67497.peg.330
Polyamine_Metabolism	Spermidine synthase (EC 2.5.1.16)	fig|6666666.67497.peg.193
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.604
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.714
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.67497.peg.714
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.67497.peg.604
Polyhydroxybutyrate_metabolism	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.605
Polyhydroxybutyrate_metabolism	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.981
Polyhydroxybutyrate_metabolism	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.1779
Polyhydroxybutyrate_metabolism	Acetoacetyl-CoA synthetase (EC 6.2.1.16)	fig|6666666.67497.peg.1780
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.108
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.366
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.1703
Polyhydroxybutyrate_metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.2219
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.67497.peg.1718
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.67497.peg.2074
Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.67497.peg.1245
Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.67497.peg.184
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.67497.peg.1766
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.67497.peg.152
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.67497.peg.1396
Potassium_homeostasis	Potassium channel protein	fig|6666666.67497.peg.1804
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.67497.peg.1452
Potassium_homeostasis	Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)	fig|6666666.67497.peg.1393
Potassium_homeostasis	Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)	fig|6666666.67497.peg.1394
Potassium_homeostasis	Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)	fig|6666666.67497.peg.1395
Potassium_homeostasis	putative Glutathione-regulated potassium-efflux system protein KefB	fig|6666666.67497.peg.392
Potassium_homeostasis	putative Glutathione-regulated potassium-efflux system protein KefB	fig|6666666.67497.peg.393
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.67497.peg.400
Proline,_4-hydroxyproline_uptake_and_utilization	L-Proline/Glycine betaine transporter ProP	fig|6666666.67497.peg.1447
Proline,_4-hydroxyproline_uptake_and_utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.67497.peg.401
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.67497.peg.1045
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.67497.peg.1522
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.67497.peg.693
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.67497.peg.692
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.67497.peg.1355
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.67497.peg.2072
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67497.peg.163
Proteasome_archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.67497.peg.1092
Proteasome_archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.67497.peg.1090
Proteasome_archaeal	Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67497.peg.1091
Proteasome_archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	fig|6666666.67497.peg.1089
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.67497.peg.1737
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.67497.peg.333
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.67497.peg.727
Protein_chaperones	Chaperone protein DnaK	fig|6666666.67497.peg.96
Protein_chaperones	ClpB protein	fig|6666666.67497.peg.323
Protein_chaperones	Heat shock protein GrpE	fig|6666666.67497.peg.97
Protein_chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.67497.peg.332
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.67497.peg.764
Protein_degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.67497.peg.1176
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.67497.peg.719
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.67497.peg.674
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.67497.peg.459
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67497.peg.672
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67497.peg.673
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.67497.peg.222
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.67497.peg.323
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.67497.peg.227
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.67497.peg.1391
Protocatechuate_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.67497.peg.485
Protocatechuate_branch_of_beta-ketoadipate_pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.67497.peg.486
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.67497.peg.50
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.67497.peg.354
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.67497.peg.1190
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.67497.peg.1191
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.67497.peg.1196
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.67497.peg.1884
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.67497.peg.1965
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.67497.peg.146
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.67497.peg.298
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.67497.peg.1921
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.67497.peg.1166
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.67497.peg.197
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.67497.peg.1923
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.67497.peg.1924
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67497.peg.296
Purine_conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67497.peg.2299
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.67497.peg.681
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.67497.peg.1873
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.67497.peg.1684
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.67497.peg.1685
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.67497.peg.1923
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.67497.peg.1924
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.67497.peg.548
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.67497.peg.1391
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67497.peg.1237
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67497.peg.1445
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.67497.peg.1148
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.67497.peg.358
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	fig|6666666.67497.peg.1206
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.67497.peg.1208
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.67497.peg.1934
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.67497.peg.799
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.67497.peg.1744
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.67497.peg.594
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.67497.peg.896
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.67497.peg.164
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.33
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.321
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.67497.peg.1713
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67497.peg.163
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.67497.peg.760
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.67497.peg.807
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67497.peg.199
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67497.peg.296
Queuosine-Archaeosine_Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.67497.peg.2299
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.67497.peg.38
Queuosine-Archaeosine_Biosynthesis	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	fig|6666666.67497.peg.292
Queuosine-Archaeosine_Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.67497.peg.2223
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.67497.peg.2225
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.67497.peg.1177
Quinone_oxidoreductase_family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.67497.peg.2245
RNA_3'-terminal_phosphate_cyclase	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.67497.peg.704
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.67497.peg.247
RNA_methylation	FIG011178: rRNA methylase	fig|6666666.67497.peg.997
RNA_methylation	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	fig|6666666.67497.peg.1544
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.67497.peg.1332
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.67497.peg.728
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.67497.peg.2327
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.67497.peg.1353
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.67497.peg.591
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.67497.peg.1480
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.1036
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.67497.peg.2326
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.67497.peg.2325
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.67497.peg.2327
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.67497.peg.1958
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.67497.peg.2018
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67497.peg.1389
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67497.peg.2019
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.67497.peg.2242
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.67497.peg.1165
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.67497.peg.769
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.67497.peg.654
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.67497.peg.687
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.67497.peg.1050
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.67497.peg.1369
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.67497.peg.536
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.67497.peg.1551
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67497.peg.1040
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.67497.peg.862
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.67497.peg.1956
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.67497.peg.1300
RecA_and_RecX	RecA protein	fig|6666666.67497.peg.1279
RecA_and_RecX	Regulatory protein RecX	fig|6666666.67497.peg.1278
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.67497.peg.2323
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.67497.peg.615
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.67497.peg.7
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.67497.peg.5
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.67497.peg.2118
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.67497.peg.1065
Respiratory_dehydrogenases_1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.67497.peg.401
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67497.peg.1611
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67497.peg.1623
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67497.peg.1677
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.67497.peg.1608
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.67497.peg.1609
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.67497.peg.968
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.67497.peg.2048
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.67497.peg.640
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.67497.peg.2049
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.67497.peg.1842
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.67497.peg.2053
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67497.peg.1155
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67497.peg.2125
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.67497.peg.1157
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.67497.peg.1154
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.67497.peg.1157
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.67497.peg.1299
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67497.peg.1155
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67497.peg.2125
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.67497.peg.1299
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.67497.peg.1156
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin transporter PnuX	fig|6666666.67497.peg.1741
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67497.peg.1155
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67497.peg.2125
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.67497.peg.1157
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.67497.peg.1154
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.67497.peg.1098
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.67497.peg.1286
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.67497.peg.1157
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67497.peg.1155
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.67497.peg.2125
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.67497.peg.1065
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.67497.peg.1168
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.67497.peg.1099
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.67497.peg.1156
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.67497.peg.1158
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.67497.peg.1378
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.67497.peg.1174
Ribonuclease_H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.67497.peg.1345
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.67497.peg.1346
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.67497.peg.1346
Ribonucleotide_reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.67497.peg.441
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.67497.peg.443
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.67497.peg.236
Ribonucleotide_reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.67497.peg.445
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.67497.peg.1262
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.67497.peg.237
Ribonucleotide_reduction	Ribonucleotide reduction protein NrdI	fig|6666666.67497.peg.442
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.67497.peg.2023
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.67497.peg.1762
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.67497.peg.1969
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.67497.peg.2015
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.67497.peg.2007
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.67497.peg.1945
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.67497.peg.1989
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.67497.peg.1967
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.67497.peg.1993
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.67497.peg.1957
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.67497.peg.1970
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.67497.peg.1348
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.67497.peg.2008
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.67497.peg.995
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.67497.peg.689
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.67497.peg.1995
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.67497.peg.1998
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.67497.peg.1988
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.67497.peg.1734
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.67497.peg.690
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.67497.peg.1773
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.67497.peg.1992
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.67497.peg.1997
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.67497.peg.1968
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.67497.peg.1772
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.67497.peg.1772
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.67497.peg.1771
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.67497.peg.1774
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.67497.peg.1774
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.67497.peg.2330
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.67497.peg.994
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.67497.peg.440
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.67497.peg.2000
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.67497.peg.1999
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.67497.peg.1987
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.67497.peg.1971
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.67497.peg.2016
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.67497.peg.2275
Ribosome_activity_modulation	Ribosomal subunit interface protein	fig|6666666.67497.peg.1825
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.67497.peg.1335
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.67497.peg.1339
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.67497.peg.1338
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.67497.peg.1202
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.67497.peg.1201
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.67497.peg.1200
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.67497.peg.233
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.67497.peg.1437
Selenoprotein_O	Selenoprotein O and cysteine-containing homologs	fig|6666666.67497.peg.1357
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.67497.peg.2143
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.605
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.981
Serine-glyoxylate_cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.1779
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.67497.peg.831
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.67497.peg.1765
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.605
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.981
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.67497.peg.1779
Serine-glyoxylate_cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.67497.peg.1116
Serine-glyoxylate_cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.67497.peg.359
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.67497.peg.1720
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.67497.peg.1043
Serine-glyoxylate_cycle	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.67497.peg.2100
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.67497.peg.676
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.67497.peg.1897
Serine-glyoxylate_cycle	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	fig|6666666.67497.peg.1784
Serine-glyoxylate_cycle	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	fig|6666666.67497.peg.1785
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.67497.peg.1897
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.67497.peg.577
Serine-glyoxylate_cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.67497.peg.1859
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67497.peg.1704
Serine-glyoxylate_cycle	Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase	fig|6666666.67497.peg.1297
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.67497.peg.2094
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67497.peg.2093
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.67497.peg.1892
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.67497.peg.1893
Serine-glyoxylate_cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.67497.peg.485
Serine-glyoxylate_cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.67497.peg.486
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.67497.peg.1445
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.67497.peg.358
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.448
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.2070
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.2144
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.448
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.2070
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.67497.peg.2144
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.67497.peg.1704
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67497.peg.861
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.67497.peg.1016
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.67497.peg.1936
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67497.peg.1731
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67497.peg.1731
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.67497.peg.1942
Sialic_Acid_Metabolism	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.67497.peg.622
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.67497.peg.1254
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.67497.peg.861
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.67497.peg.1347
Single-Rhodanese-domain_proteins	Glutathione S-transferase domain protein	fig|6666666.67497.peg.1455
Single-Rhodanese-domain_proteins	Rhodanese domain protein UPF0176, Actinobacterial subgroup	fig|6666666.67497.peg.286
Sortase	Sortase A, LPXTG specific	fig|6666666.67497.peg.434
Sortase	Sortase A, LPXTG specific	fig|6666666.67497.peg.437
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1735
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1738
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.67497.peg.1921
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.67497.peg.181
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.67497.peg.1930
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.67497.peg.1913
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.67497.peg.1776
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.67497.peg.405
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.67497.peg.1132
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.67497.peg.231
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67497.peg.230
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1153
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1719
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.1812
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.67497.peg.2110
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.67497.peg.1195
Succinate_dehydrogenase	Hypothetical succinate dehydrogenase membrane anhor protein	fig|6666666.67497.peg.2092
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.67497.peg.2095
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.67497.peg.2094
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67497.peg.2093
Sulfur_oxidation	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.67497.peg.2058
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.67497.peg.1531
TCA_Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.67497.peg.1116
TCA_Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.67497.peg.359
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.67497.peg.2103
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.67497.peg.1531
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.67497.peg.1688
TCA_Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.67497.peg.1891
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.67497.peg.676
TCA_Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.67497.peg.1313
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.67497.peg.2094
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.67497.peg.2093
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.67497.peg.1892
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.67497.peg.1893
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.67497.peg.230
Teichoic_and_lipoteichoic_acids_biosynthesis	Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	fig|6666666.67497.peg.819
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.67497.peg.1505
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.67497.peg.446
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.67497.peg.808
Terminal_cytochrome_C_oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.67497.peg.811
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.67497.peg.2025
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.67497.peg.2025
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.67497.peg.1237
Thiamin_biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.67497.peg.1011
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67497.peg.1427
Thiamin_biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67497.peg.1905
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.67497.peg.1008
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.67497.peg.1012
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.67497.peg.1378
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.67497.peg.1009
Thiamin_biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.67497.peg.1903
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.67497.peg.597
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.67497.peg.596
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.67497.peg.1259
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.67497.peg.470
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.67497.peg.2320
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.67497.peg.164
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.67497.peg.163
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.79
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.717
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.67497.peg.777
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.67497.peg.2172
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.67497.peg.2173
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.67497.peg.1513
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.67497.peg.1512
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.67497.peg.781
Ton_and_Tol_transport_systems	Iron-chelator utilization protein	fig|6666666.67497.peg.1620
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.67497.peg.1590
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.67497.peg.1591
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.67497.peg.1605
Transcription_factors_bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.67497.peg.1306
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.67497.peg.1349
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.67497.peg.2006
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.67497.peg.1710
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.67497.peg.1509
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.67497.peg.1307
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.67497.peg.1174
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.67497.peg.1728
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.67497.peg.1246
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.67497.peg.1254
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.423
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.451
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.67497.peg.2319
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.67497.peg.1539
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.67497.peg.1815
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-70 factor	fig|6666666.67497.peg.1928
Transcription_initiation,_bacterial_sigma_factors	Serine protease precursor MucD/AlgY associated with sigma factor RpoE	fig|6666666.67497.peg.1768
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.67497.peg.390
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.67497.peg.1367
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67497.peg.1731
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.67497.peg.1734
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67497.peg.1731
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1735
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1738
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.67497.peg.1732
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.67497.peg.1728
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.67497.peg.2025
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.67497.peg.1175
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.67497.peg.2025
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.67497.peg.705
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.67497.peg.1175
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.67497.peg.1338
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.67497.peg.2026
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.67497.peg.1160
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.67497.peg.1304
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.67497.peg.1962
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.67497.peg.1305
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.67497.peg.2073
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.67497.peg.993
Translation_termination_factors_bacterial	Hypothetical protein YaeJ with similarity to translation release factor	fig|6666666.67497.peg.1603
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67497.peg.1320
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.67497.peg.1964
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.67497.peg.1508
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.67497.peg.400
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.67497.peg.1736
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67497.peg.175
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.67497.peg.1161
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1735
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.67497.peg.1738
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.67497.peg.1507
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.67497.peg.1335
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.67497.peg.405
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.67497.peg.1490
Trehalose_Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.67497.peg.256
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.67497.peg.876
Trehalose_Biosynthesis	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.67497.peg.873
Trehalose_Biosynthesis	Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)	fig|6666666.67497.peg.867
Trehalose_Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.67497.peg.1489
Trehalose_Biosynthesis	Trehalose phosphorylase (EC 2.4.1.64)	fig|6666666.67497.peg.2096
Trehalose_Uptake_and_Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.67497.peg.2097
Trehalose_Uptake_and_Utilization	PTS system, glucose-specific IIA component (EC 2.7.1.69)	fig|6666666.67497.peg.319
Trehalose_Uptake_and_Utilization	PTS system, glucose-specific IIB component (EC 2.7.1.69)	fig|6666666.67497.peg.319
Trehalose_Uptake_and_Utilization	PTS system, glucose-specific IIC component (EC 2.7.1.69)	fig|6666666.67497.peg.319
Trehalose_Uptake_and_Utilization	Trehalose phosphorylase (EC 2.4.1.64)	fig|6666666.67497.peg.2096
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.67497.peg.223
Triacylglycerol_metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.67497.peg.1070
Tryptophan_synthesis	Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.67497.peg.886
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.67497.peg.128
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.67497.peg.810
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.67497.peg.41
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.67497.peg.890
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.67497.peg.892
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.67497.peg.36
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.67497.peg.41
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.67497.peg.36
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.67497.peg.894
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.67497.peg.893
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.67497.peg.1087
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.67497.peg.1537
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.67497.peg.1086
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67497.peg.1611
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67497.peg.1623
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.67497.peg.1677
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.67497.peg.1608
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.67497.peg.1609
Type_VI_secretion_systems	ClpB protein	fig|6666666.67497.peg.323
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.67497.peg.1936
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.67497.peg.1731
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.67497.peg.1731
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.67497.peg.1942
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.67497.peg.2086
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.67497.peg.105
USS-DB-7	ClpB protein	fig|6666666.67497.peg.323
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.67497.peg.814
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.67497.peg.813
Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.67497.peg.812
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.67497.peg.1231
Unspecified_monosaccharide_transport_cluster	ACT domain protein	fig|6666666.67497.peg.1123
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.67497.peg.1289
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.67497.peg.1511
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.67497.peg.1377
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiB	fig|6666666.67497.peg.1839
WhiB_and_WhiB-type_regulatory_proteins_	Sporulation regulatory protein WhiD	fig|6666666.67497.peg.1929
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-like transcription regulator	fig|6666666.67497.peg.1813
WhiB_and_WhiB-type_regulatory_proteins_	WhiB-type transcription regulator	fig|6666666.67497.peg.2156
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.67497.peg.1751
YjeE	NAD(P)HX dehydratase	fig|6666666.67497.peg.1715
YjeE	NAD(P)HX epimerase	fig|6666666.67497.peg.1715
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.67497.peg.225
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.67497.peg.234
Zinc_regulated_enzymes	Dihydroorotase (EC 3.5.2.3)	fig|6666666.67497.peg.1171
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.67497.peg.199
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.67497.peg.2323
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.67497.peg.889
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.67497.peg.2065
Zinc_regulated_enzymes	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.67497.peg.1446
Zinc_regulated_enzymes	Zinc uptake regulation protein ZUR	fig|6666666.67497.peg.740
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67497.peg.672
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.67497.peg.673
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.67497.peg.1196
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.67497.peg.2130
cAMP_signaling_in_bacteria	ElaA protein	fig|6666666.67497.peg.285
cAMP_signaling_in_bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.67497.peg.1439
cAMP_signaling_in_bacteria	Prophage Clp protease-like protein	fig|6666666.67497.peg.938
cAMP_signaling_in_bacteria	Prophage Clp protease-like protein	fig|6666666.67497.peg.1656
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.67497.peg.2152
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.67497.peg.2048
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.67497.peg.2049
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.67497.peg.1842
dTDP-rhamnose_synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.67497.peg.1841
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.67497.peg.2053
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.1482
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.67497.peg.2246
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.67497.peg.1129
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.604
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.67497.peg.714
n-Phenylalkanoic_acid_degradation	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.67497.peg.604
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.605
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.981
n-Phenylalkanoic_acid_degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.67497.peg.1779
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.108
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.366
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.1703
n-Phenylalkanoic_acid_degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.67497.peg.2219
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.221
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.419
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.449
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.575
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.579
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.723
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.1780
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.2085
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.67497.peg.2249
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.67497.peg.2133
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.67497.peg.2276
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.67497.peg.1190
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.67497.peg.1191
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.67497.peg.1033
pyrimidine_conversions	Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	fig|6666666.67497.peg.637
pyrimidine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.67497.peg.681
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.67497.peg.1873
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.67497.peg.2320
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.67497.peg.1830
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.67497.peg.383
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.67497.peg.1173
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.67497.peg.1876
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67497.peg.1155
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.67497.peg.2125
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.67497.peg.1299
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.67497.peg.1299
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.67497.peg.1156
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.67497.peg.1185
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.67497.peg.1516
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.67497.peg.1188
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.67497.peg.1464
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.67497.peg.1459
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.67497.peg.1465
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.67497.peg.1188
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.67497.peg.234
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.67497.peg.1416
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.67497.peg.1464
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.67497.peg.1459
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.67497.peg.1465
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.67497.peg.1416
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.67497.peg.742
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.67497.peg.1192
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.67497.peg.855
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.67497.peg.2294
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.67497.peg.215
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein	fig|6666666.67497.peg.712
tRNA_aminoacylation,_Lys	Putative membrane protein found fused to lysyl-tRNA synthetase like protein	fig|6666666.67497.peg.712
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.67497.peg.1753
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.67497.peg.998
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.67497.peg.999
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.67497.peg.563
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.67497.peg.1214
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.67497.peg.1886
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.67497.peg.1015
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.67497.peg.678
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.67497.peg.2313
tRNA_splicing	RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.67497.peg.704
tRNAs	tRNA-Ala-GGC	fig|6666666.67497.rna.15
tRNAs	tRNA-Arg-ACG	fig|6666666.67497.rna.58
tRNAs	tRNA-Arg-ACG	fig|6666666.67497.rna.59
tRNAs	tRNA-Arg-CCG	fig|6666666.67497.rna.46
tRNAs	tRNA-Cys-GCA	fig|6666666.67497.rna.39
tRNAs	tRNA-Gly-CCC	fig|6666666.67497.rna.20
tRNAs	tRNA-Gly-GCC	fig|6666666.67497.rna.36
tRNAs	tRNA-Gly-GCC	fig|6666666.67497.rna.38
tRNAs	tRNA-Gly-GCC	fig|6666666.67497.rna.41
tRNAs	tRNA-Leu-CAA	fig|6666666.67497.rna.29
tRNAs	tRNA-Leu-CAG	fig|6666666.67497.rna.3
tRNAs	tRNA-Leu-GAG	fig|6666666.67497.rna.34
tRNAs	tRNA-Phe-GAA	fig|6666666.67497.rna.8
tRNAs	tRNA-Pro-CGG	fig|6666666.67497.rna.55
tRNAs	tRNA-Pro-GGG	fig|6666666.67497.rna.33
tRNAs	tRNA-Ser-CGA	fig|6666666.67497.rna.57
tRNAs	tRNA-Trp-CCA	fig|6666666.67497.rna.50
tRNAs	tRNA-Val-CAC	fig|6666666.67497.rna.35
tRNAs	tRNA-Val-GAC	fig|6666666.67497.rna.37
tRNAs	tRNA-Val-GAC	fig|6666666.67497.rna.40