fig|6666666.65894.peg.1 CDS gi|522808863|gb|ATVF01000026.1| 787 978 1 + 192 hypothetical protein - none -
fig|6666666.65894.peg.2 CDS gi|522808872|gb|ATVF01000023.1| 12 587 3 + 576 hypothetical protein - none -
fig|6666666.65894.peg.3 CDS gi|522808872|gb|ATVF01000023.1| 1219 1332 1 + 114 hypothetical protein - none -
fig|6666666.65894.peg.4 CDS gi|522808872|gb|ATVF01000023.1| 1325 1942 2 + 618 hypothetical protein - none -
fig|6666666.65894.peg.5 CDS gi|522808872|gb|ATVF01000023.1| 1935 2375 3 + 441 hypothetical protein - none -
fig|6666666.65894.peg.6 CDS gi|522808873|gb|ATVF01000022.1| 1130 537 -2 - 594 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65894.peg.7 CDS gi|522808873|gb|ATVF01000022.1| 1230 1967 3 + 738 hypothetical protein - none -
fig|6666666.65894.peg.8 CDS gi|522808873|gb|ATVF01000022.1| 2270 2419 2 + 150 hypothetical protein - none -
fig|6666666.65894.peg.9 CDS gi|522808873|gb|ATVF01000022.1| 2468 2593 2 + 126 hypothetical protein - none -
fig|6666666.65894.peg.10 CDS gi|522808874|gb|ATVF01000021.1| 123 320 3 + 198 hypothetical protein - none -
fig|6666666.65894.peg.11 CDS gi|522808874|gb|ATVF01000021.1| 380 619 2 + 240 hypothetical membrane protein - none -
fig|6666666.65894.peg.12 CDS gi|522808874|gb|ATVF01000021.1| 588 779 3 + 192 hypothetical protein - none -
fig|6666666.65894.peg.13 CDS gi|522808874|gb|ATVF01000021.1| 1268 1651 2 + 384 FIG00546213: hypothetical protein - none -
fig|6666666.65894.peg.14 CDS gi|522808874|gb|ATVF01000021.1| 2196 2801 3 + 606 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65894.peg.15 CDS gi|522808875|gb|ATVF01000020.1| 1653 562 -3 - 1092 FIG00549266: hypothetical protein - none -
fig|6666666.65894.peg.16 CDS gi|522808875|gb|ATVF01000020.1| 1663 3474 1 + 1812 Mobile element protein - none -
fig|6666666.65894.peg.17 CDS gi|522808876|gb|ATVF01000019.1| 1151 858 -2 - 294 Mobile element protein - none -
fig|6666666.65894.peg.18 CDS gi|522808876|gb|ATVF01000019.1| 2447 1377 -2 - 1071 Mobile element protein - none -
fig|6666666.65894.peg.19 CDS gi|522808876|gb|ATVF01000019.1| 2922 3365 3 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65894.peg.20 CDS gi|522808876|gb|ATVF01000019.1| 3365 3913 2 + 549 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.65894.peg.21 CDS gi|522808878|gb|ATVF01000018.1| 211 528 1 + 318 Mobile element protein - none -
fig|6666666.65894.peg.22 CDS gi|522808878|gb|ATVF01000018.1| 2634 919 -3 - 1716 D-Lactate dehydrogenase (EC 1.1.2.5) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.65894.peg.23 CDS gi|522808878|gb|ATVF01000018.1| 4170 3013 -3 - 1158 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.65894.peg.24 CDS gi|522808878|gb|ATVF01000018.1| 5293 5045 -1 - 249 hypothetical protein - none -
fig|6666666.65894.peg.25 CDS gi|522808880|gb|ATVF01000017.1| 71 1165 2 + 1095 FIG00545251: hypothetical protein - none -
fig|6666666.65894.peg.26 CDS gi|522808880|gb|ATVF01000017.1| 3364 2381 -1 - 984 ATP-grasp enzyme-like protein - none -
fig|6666666.65894.peg.27 CDS gi|522808880|gb|ATVF01000017.1| 3547 3696 1 + 150 hypothetical protein - none -
fig|6666666.65894.peg.28 CDS gi|522808880|gb|ATVF01000017.1| 3780 4184 3 + 405 serine protease - none -
fig|6666666.65894.peg.29 CDS gi|522808882|gb|ATVF01000016.1| 2630 2082 -2 - 549 FIG00547290: hypothetical protein - none -
fig|6666666.65894.peg.30 CDS gi|522808882|gb|ATVF01000016.1| 4198 3104 -1 - 1095 hypothetical membrane protein - none -
fig|6666666.65894.peg.31 CDS gi|522808882|gb|ATVF01000016.1| 5446 4346 -1 - 1101 FIG00545251: hypothetical protein - none -
fig|6666666.65894.peg.32 CDS gi|522808884|gb|ATVF01000015.1| 38 895 2 + 858 ATP binding protein of ABC transporter for sugars - none -
fig|6666666.65894.peg.33 CDS gi|522808884|gb|ATVF01000015.1| 916 1050 1 + 135 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65894.peg.34 CDS gi|522808884|gb|ATVF01000015.1| 1677 1153 -3 - 525 hypothetical membrane protein - none -
fig|6666666.65894.peg.35 CDS gi|522808884|gb|ATVF01000015.1| 2731 1817 -1 - 915 Multiple sugar ABC transporter, membrane-spanning permease protein MsmG - none -
fig|6666666.65894.peg.36 CDS gi|522808884|gb|ATVF01000015.1| 3580 2735 -1 - 846 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF - none -
fig|6666666.65894.peg.37 CDS gi|522808884|gb|ATVF01000015.1| 5100 3769 -3 - 1332 FIG00545076: hypothetical protein - none -
fig|6666666.65894.peg.38 CDS gi|522808884|gb|ATVF01000015.1| 5170 5301 1 + 132 hypothetical protein - none -
fig|6666666.65894.peg.39 CDS gi|522808884|gb|ATVF01000015.1| 6708 5464 -3 - 1245 Chromosome segregation ATPases - none -
fig|6666666.65894.peg.40 CDS gi|522808884|gb|ATVF01000015.1| 7681 6791 -1 - 891 ATP binding protein of ABC transporter for sugars - none -
fig|6666666.65894.peg.41 CDS gi|522808886|gb|ATVF01000014.1| 2169 451 -3 - 1719 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65894.peg.42 CDS gi|522808886|gb|ATVF01000014.1| 2506 3354 1 + 849 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.43 CDS gi|522808886|gb|ATVF01000014.1| 3351 5912 3 + 2562 ABC-type transporter, permease component - none -
fig|6666666.65894.peg.44 CDS gi|522808886|gb|ATVF01000014.1| 6089 7465 2 + 1377 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65894.peg.45 CDS gi|522808886|gb|ATVF01000014.1| 7535 8266 2 + 732 hypothetical protein - none -
fig|6666666.65894.peg.46 CDS gi|522808886|gb|ATVF01000014.1| 8589 8263 -3 - 327 CrcB protein - none -
fig|6666666.65894.peg.47 CDS gi|522808886|gb|ATVF01000014.1| 8882 8586 -2 - 297 camphor resistance protein CrcB - none -
fig|6666666.65894.peg.48 CDS gi|522808886|gb|ATVF01000014.1| 8991 10631 3 + 1641 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.65894.peg.49 CDS gi|522808886|gb|ATVF01000014.1| 11085 11813 3 + 729 FIG00544592: hypothetical protein - none -
fig|6666666.65894.peg.50 CDS gi|522808886|gb|ATVF01000014.1| 12340 12495 1 + 156 hypothetical protein - none -
fig|6666666.65894.peg.51 CDS gi|522808886|gb|ATVF01000014.1| 12461 12685 2 + 225 hypothetical protein - none -
fig|6666666.65894.peg.52 CDS gi|522808886|gb|ATVF01000014.1| 12730 13752 1 + 1023 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.53 CDS gi|522808886|gb|ATVF01000014.1| 13856 14269 2 + 414 FIG00543983: hypothetical protein - none -
fig|6666666.65894.peg.54 CDS gi|522808886|gb|ATVF01000014.1| 14269 15021 1 + 753 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.65894.peg.55 CDS gi|522808886|gb|ATVF01000014.1| 15861 15022 -3 - 840 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.65894.peg.56 CDS gi|522808886|gb|ATVF01000014.1| 16012 16134 1 + 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65894.peg.57 CDS gi|522808886|gb|ATVF01000014.1| 16543 16776 1 + 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.65894.peg.58 CDS gi|522808886|gb|ATVF01000014.1| 16895 17338 2 + 444 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65894.peg.59 CDS gi|522808886|gb|ATVF01000014.1| 17424 19529 3 + 2106 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65894.peg.60 CDS gi|522808886|gb|ATVF01000014.1| 20331 19582 -3 - 750 Transcriptional regulator, GntR family - none -
fig|6666666.65894.peg.61 CDS gi|522808886|gb|ATVF01000014.1| 20981 20493 -2 - 489 Putative bacterioferritin - none -
fig|6666666.65894.peg.62 CDS gi|522808886|gb|ATVF01000014.1| 21511 22515 1 + 1005 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65894.peg.63 CDS gi|522808886|gb|ATVF01000014.1| 23169 23017 -3 - 153 hypothetical protein - none -
fig|6666666.65894.peg.64 CDS gi|522808886|gb|ATVF01000014.1| 23146 24810 1 + 1665 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65894.peg.65 CDS gi|522808886|gb|ATVF01000014.1| 24924 26219 3 + 1296 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65894.peg.66 CDS gi|522808886|gb|ATVF01000014.1| 26212 26952 1 + 741 FIG00546117: hypothetical protein - none -
fig|6666666.65894.peg.67 CDS gi|522808886|gb|ATVF01000014.1| 27022 27903 1 + 882 hypothetical protein - none -
fig|6666666.65894.peg.68 CDS gi|522808886|gb|ATVF01000014.1| 29977 27977 -1 - 2001 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65894.peg.69 CDS gi|522808886|gb|ATVF01000014.1| 30889 30122 -1 - 768 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.65894.peg.70 CDS gi|522808886|gb|ATVF01000014.1| 32407 31070 -1 - 1338 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.65894.peg.71 CDS gi|522808886|gb|ATVF01000014.1| 32955 32404 -3 - 552 contains SCP/PR1 domains - none -
fig|6666666.65894.peg.72 CDS gi|522808886|gb|ATVF01000014.1| 33147 33527 3 + 381 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65894.peg.73 CDS gi|522808886|gb|ATVF01000014.1| 33536 34078 2 + 543 Transcriptional regulatory protein - none -
fig|6666666.65894.peg.74 CDS gi|522808886|gb|ATVF01000014.1| 34080 35021 3 + 942 possible hydrolase - none -
fig|6666666.65894.peg.75 CDS gi|522808886|gb|ATVF01000014.1| 35011 35748 1 + 738 FIG00545125: hypothetical protein - none -
fig|6666666.65894.peg.76 CDS gi|522808886|gb|ATVF01000014.1| 35847 36347 3 + 501 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.77 CDS gi|522808886|gb|ATVF01000014.1| 37006 36344 -1 - 663 hypothetical protein - none -
fig|6666666.65894.peg.78 CDS gi|522808886|gb|ATVF01000014.1| 37081 37932 1 + 852 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.79 CDS gi|522808886|gb|ATVF01000014.1| 38046 38813 3 + 768 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.65894.peg.80 CDS gi|522808886|gb|ATVF01000014.1| 38930 39667 2 + 738 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.65894.peg.81 CDS gi|522808886|gb|ATVF01000014.1| 39668 40273 2 + 606 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65894.peg.82 CDS gi|522808886|gb|ATVF01000014.1| 40690 40337 -1 - 354 FIG00543835: hypothetical protein - none -
fig|6666666.65894.peg.83 CDS gi|522808886|gb|ATVF01000014.1| 41182 40766 -1 - 417 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.65894.peg.84 CDS gi|522808886|gb|ATVF01000014.1| 42268 41666 -1 - 603 FIG00544635: hypothetical protein - none -
fig|6666666.65894.peg.85 CDS gi|522808886|gb|ATVF01000014.1| 42572 42691 2 + 120 hypothetical protein - none -
fig|6666666.65894.peg.86 CDS gi|522808886|gb|ATVF01000014.1| 42919 51906 1 + 8988 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65894.peg.87 CDS gi|522808886|gb|ATVF01000014.1| 53331 52105 -3 - 1227 hypothetical protein - none -
fig|6666666.65894.peg.88 CDS gi|522808886|gb|ATVF01000014.1| 54347 54219 -2 - 129 hypothetical protein - none -
fig|6666666.65894.peg.89 CDS gi|522808886|gb|ATVF01000014.1| 55786 57228 1 + 1443 putative transport protein - none -
fig|6666666.65894.peg.90 CDS gi|522808886|gb|ATVF01000014.1| 57239 57643 2 + 405 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65894.peg.91 CDS gi|522808886|gb|ATVF01000014.1| 58305 57640 -3 - 666 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.92 CDS gi|522808886|gb|ATVF01000014.1| 58808 58332 -2 - 477 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65894.peg.93 CDS gi|522808886|gb|ATVF01000014.1| 58985 59260 2 + 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65894.peg.94 CDS gi|522808886|gb|ATVF01000014.1| 59875 59315 -1 - 561 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.65894.peg.95 CDS gi|522808886|gb|ATVF01000014.1| 60457 59927 -1 - 531 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.65894.peg.96 CDS gi|522808886|gb|ATVF01000014.1| 60725 60564 -2 - 162 hypothetical protein - none -
fig|6666666.65894.peg.97 CDS gi|522808886|gb|ATVF01000014.1| 60752 62020 2 + 1269 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65894.peg.98 CDS gi|522808886|gb|ATVF01000014.1| 62111 62773 2 + 663 FIG00546362: hypothetical protein - none -
fig|6666666.65894.peg.99 CDS gi|522808886|gb|ATVF01000014.1| 63213 63524 3 + 312 hypothetical protein - none -
fig|6666666.65894.peg.100 CDS gi|522808886|gb|ATVF01000014.1| 63482 63901 2 + 420 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65894.peg.101 CDS gi|522808886|gb|ATVF01000014.1| 63886 65031 1 + 1146 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65894.peg.102 CDS gi|522808886|gb|ATVF01000014.1| 65003 65434 2 + 432 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65894.peg.103 CDS gi|522808886|gb|ATVF01000014.1| 65845 65492 -1 - 354 hypothetical protein - none -
fig|6666666.65894.peg.104 CDS gi|522808886|gb|ATVF01000014.1| 66814 68016 1 + 1203 putative lipoprotein - none -
fig|6666666.65894.peg.105 CDS gi|522808886|gb|ATVF01000014.1| 68208 69452 3 + 1245 FIG00549904: hypothetical protein - none -
fig|6666666.65894.peg.106 CDS gi|522808886|gb|ATVF01000014.1| 70121 69462 -2 - 660 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65894.peg.107 CDS gi|522808886|gb|ATVF01000014.1| 70924 70124 -1 - 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.65894.peg.108 CDS gi|522808886|gb|ATVF01000014.1| 71748 70981 -3 - 768 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.65894.peg.109 CDS gi|522808886|gb|ATVF01000014.1| 71940 72095 3 + 156 hypothetical protein - none -
fig|6666666.65894.peg.110 CDS gi|522808888|gb|ATVF01000013.1| 370 1416 1 + 1047 hypothetical protein - none -
fig|6666666.65894.peg.111 CDS gi|522808888|gb|ATVF01000013.1| 1413 2363 3 + 951 hypothetical protein - none -
fig|6666666.65894.peg.112 CDS gi|522808888|gb|ATVF01000013.1| 2536 3690 1 + 1155 RESOLVASE FAMILY RECOMBINASE - none -
fig|6666666.65894.peg.113 CDS gi|522808888|gb|ATVF01000013.1| 4117 4689 1 + 573 hypothetical protein - none -
fig|6666666.65894.peg.114 CDS gi|522808888|gb|ATVF01000013.1| 4949 5446 2 + 498 hypothetical protein - none -
fig|6666666.65894.peg.115 CDS gi|522808888|gb|ATVF01000013.1| 5874 6221 3 + 348 hypothetical protein - none -
fig|6666666.65894.peg.116 CDS gi|522808888|gb|ATVF01000013.1| 6336 6644 3 + 309 hypothetical protein - none -
fig|6666666.65894.peg.117 CDS gi|522808888|gb|ATVF01000013.1| 6644 7144 2 + 501 hypothetical protein - none -
fig|6666666.65894.peg.118 CDS gi|522808888|gb|ATVF01000013.1| 7160 7720 2 + 561 probable replicative DNA helicase - none -
fig|6666666.65894.peg.119 CDS gi|522808888|gb|ATVF01000013.1| 8216 7791 -2 - 426 Phage protein - none -
fig|6666666.65894.peg.120 CDS gi|522808888|gb|ATVF01000013.1| 8617 8324 -1 - 294 hypothetical protein - none -
fig|6666666.65894.peg.121 CDS gi|522808888|gb|ATVF01000013.1| 8973 12953 3 + 3981 hypothetical protein - none -
fig|6666666.65894.peg.122 CDS gi|522808888|gb|ATVF01000013.1| 13663 13010 -1 - 654 hypothetical protein - none -
fig|6666666.65894.peg.123 CDS gi|522808888|gb|ATVF01000013.1| 14197 13682 -1 - 516 hypothetical protein - none -
fig|6666666.65894.peg.124 CDS gi|522808888|gb|ATVF01000013.1| 15959 14208 -2 - 1752 conjugative transfer gene complex protein - none -
fig|6666666.65894.peg.125 CDS gi|522808888|gb|ATVF01000013.1| 16642 15959 -1 - 684 hypothetical protein - none -
fig|6666666.65894.peg.126 CDS gi|522808888|gb|ATVF01000013.1| 17296 16712 -1 - 585 hypothetical protein - none -
fig|6666666.65894.peg.127 CDS gi|522808888|gb|ATVF01000013.1| 18907 17306 -1 - 1602 hypothetical protein - none -
fig|6666666.65894.peg.128 CDS gi|522808888|gb|ATVF01000013.1| 18894 19166 3 + 273 hypothetical protein - none -
fig|6666666.65894.peg.129 CDS gi|522808888|gb|ATVF01000013.1| 20913 19189 -3 - 1725 FIG00547607: hypothetical protein - none -
fig|6666666.65894.peg.130 CDS gi|522808888|gb|ATVF01000013.1| 21758 20928 -2 - 831 hypothetical protein - none -
fig|6666666.65894.peg.131 CDS gi|522808888|gb|ATVF01000013.1| 23258 21774 -2 - 1485 FIG00548804: hypothetical protein - none -
fig|6666666.65894.peg.132 CDS gi|522808888|gb|ATVF01000013.1| 24965 23265 -2 - 1701 hypothetical protein - none -
fig|6666666.65894.peg.133 CDS gi|522808888|gb|ATVF01000013.1| 25759 24953 -1 - 807 hypothetical protein - none -
fig|6666666.65894.peg.134 CDS gi|522808888|gb|ATVF01000013.1| 26401 25775 -1 - 627 putative involved in replication/partition - none -
fig|6666666.65894.peg.135 CDS gi|522808888|gb|ATVF01000013.1| 26705 26427 -2 - 279 hypothetical protein - none -
fig|6666666.65894.peg.136 CDS gi|522808888|gb|ATVF01000013.1| 27009 26719 -3 - 291 hypothetical protein - none -
fig|6666666.65894.peg.137 CDS gi|522808888|gb|ATVF01000013.1| 27429 27040 -3 - 390 hypothetical protein - none -
fig|6666666.65894.peg.138 CDS gi|522808888|gb|ATVF01000013.1| 29492 27687 -2 - 1806 hypothetical protein - none -
fig|6666666.65894.peg.139 CDS gi|522808888|gb|ATVF01000013.1| 30218 29496 -2 - 723 hypothetical protein - none -
fig|6666666.65894.peg.140 CDS gi|522808888|gb|ATVF01000013.1| 31184 30249 -2 - 936 hypothetical protein - none -
fig|6666666.65894.peg.141 CDS gi|522808888|gb|ATVF01000013.1| 31356 31775 3 + 420 hypothetical protein - none -
fig|6666666.65894.peg.142 CDS gi|522808888|gb|ATVF01000013.1| 31828 32196 1 + 369 hypothetical protein - none -
fig|6666666.65894.peg.143 CDS gi|522808888|gb|ATVF01000013.1| 32757 32182 -3 - 576 hypothetical protein - none -
fig|6666666.65894.peg.144 CDS gi|522808888|gb|ATVF01000013.1| 33764 32760 -2 - 1005 hypothetical protein - none -
fig|6666666.65894.peg.145 CDS gi|522808888|gb|ATVF01000013.1| 33948 33766 -3 - 183 hypothetical protein - none -
fig|6666666.65894.peg.146 CDS gi|522808888|gb|ATVF01000013.1| 34801 36246 1 + 1446 hypothetical protein - none -
fig|6666666.65894.peg.147 CDS gi|522808888|gb|ATVF01000013.1| 36498 38345 3 + 1848 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.65894.peg.148 CDS gi|522808888|gb|ATVF01000013.1| 38348 40903 2 + 2556 hypothetical protein - none -
fig|6666666.65894.peg.149 CDS gi|522808888|gb|ATVF01000013.1| 46792 41033 -1 - 5760 hypothetical protein - none -
fig|6666666.65894.peg.150 CDS gi|522808888|gb|ATVF01000013.1| 47661 47353 -3 - 309 hypothetical protein - none -
fig|6666666.65894.peg.151 CDS gi|522808888|gb|ATVF01000013.1| 47837 47658 -2 - 180 hypothetical protein - none -
fig|6666666.65894.peg.152 CDS gi|522808888|gb|ATVF01000013.1| 47983 48162 1 + 180 hypothetical protein - none -
fig|6666666.65894.peg.153 CDS gi|522808888|gb|ATVF01000013.1| 49450 48470 -1 - 981 IncW-like replication protein - none -
fig|6666666.65894.peg.154 CDS gi|522808888|gb|ATVF01000013.1| 49889 49611 -2 - 279 hypothetical protein - none -
fig|6666666.65894.peg.155 CDS gi|522808888|gb|ATVF01000013.1| 50521 49898 -1 - 624 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65894.peg.156 CDS gi|522808888|gb|ATVF01000013.1| 50714 51385 2 + 672 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65894.peg.157 CDS gi|522808888|gb|ATVF01000013.1| 52242 51580 -3 - 663 hypothetical protein - none -
fig|6666666.65894.peg.158 CDS gi|522808888|gb|ATVF01000013.1| 53462 52242 -2 - 1221 hypothetical protein - none -
fig|6666666.65894.peg.159 CDS gi|522808888|gb|ATVF01000013.1| 53580 53741 3 + 162 Mobile element protein - none -
fig|6666666.65894.peg.160 CDS gi|522808888|gb|ATVF01000013.1| 55353 55949 3 + 597 Mobile element protein - none -
fig|6666666.65894.peg.161 CDS gi|522808888|gb|ATVF01000013.1| 56643 56074 -3 - 570 hypothetical protein - none -
fig|6666666.65894.peg.162 CDS gi|522808888|gb|ATVF01000013.1| 57057 56707 -3 - 351 hypothetical protein - none -
fig|6666666.65894.peg.163 CDS gi|522808888|gb|ATVF01000013.1| 57607 59223 1 + 1617 conserved hypothetical protein (putative ATP-binding) - none -
fig|6666666.65894.peg.164 CDS gi|522808888|gb|ATVF01000013.1| 59227 60909 1 + 1683 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65894.peg.165 CDS gi|522808888|gb|ATVF01000013.1| 61196 61393 2 + 198 Mobile element protein - none -
fig|6666666.65894.peg.166 CDS gi|522808888|gb|ATVF01000013.1| 61483 62634 1 + 1152 Mobile element protein - none -
fig|6666666.65894.peg.167 CDS gi|522808888|gb|ATVF01000013.1| 62688 63335 3 + 648 Mobile element protein - none -
fig|6666666.65894.peg.168 CDS gi|522808888|gb|ATVF01000013.1| 63740 63970 2 + 231 transposase - none -
fig|6666666.65894.peg.169 CDS gi|522808888|gb|ATVF01000013.1| 65167 64070 -1 - 1098 Mobile element protein - none -
fig|6666666.65894.peg.170 CDS gi|522808888|gb|ATVF01000013.1| 67537 65450 -1 - 2088 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65894.peg.171 CDS gi|522808888|gb|ATVF01000013.1| 68734 67661 -1 - 1074 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65894.peg.172 CDS gi|522808888|gb|ATVF01000013.1| 70467 68764 -3 - 1704 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65894.peg.173 CDS gi|522808888|gb|ATVF01000013.1| 72523 71273 -1 - 1251 FIG00546434: hypothetical protein - none -
fig|6666666.65894.peg.174 CDS gi|522808888|gb|ATVF01000013.1| 72512 74272 2 + 1761 Copper resistance protein D Copper homeostasis
fig|6666666.65894.peg.175 CDS gi|522808888|gb|ATVF01000013.1| 74619 75410 3 + 792 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65894.peg.176 CDS gi|522808888|gb|ATVF01000013.1| 75990 76697 3 + 708 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.65894.peg.177 CDS gi|522808888|gb|ATVF01000013.1| 76745 77356 2 + 612 FIG00733622: hypothetical protein - none -
fig|6666666.65894.peg.178 CDS gi|522808890|gb|ATVF01000012.1| 70 363 1 + 294 Mobile element protein - none -
fig|6666666.65894.peg.179 CDS gi|522808890|gb|ATVF01000012.1| 614 471 -2 - 144 hypothetical protein - none -
fig|6666666.65894.peg.180 CDS gi|522808890|gb|ATVF01000012.1| 2248 1163 -1 - 1086 insertion element conserved hypothetical protein - none -
fig|6666666.65894.peg.181 CDS gi|522808890|gb|ATVF01000012.1| 3542 2595 -2 - 948 ADP-ribosylglycohydrolase - none -
fig|6666666.65894.peg.182 CDS gi|522808890|gb|ATVF01000012.1| 4154 3657 -2 - 498 FIG00545451: hypothetical protein - none -
fig|6666666.65894.peg.183 CDS gi|522808890|gb|ATVF01000012.1| 4470 5477 3 + 1008 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65894.peg.184 CDS gi|522808890|gb|ATVF01000012.1| 6093 5602 -3 - 492 FIG00545221: hypothetical protein - none -
fig|6666666.65894.peg.185 CDS gi|522808890|gb|ATVF01000012.1| 6454 6858 1 + 405 putative reductase - none -
fig|6666666.65894.peg.186 CDS gi|522808890|gb|ATVF01000012.1| 7057 8466 1 + 1410 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65894.peg.187 CDS gi|522808890|gb|ATVF01000012.1| 9780 8524 -3 - 1257 FIG00546478: hypothetical protein - none -
fig|6666666.65894.peg.188 CDS gi|522808890|gb|ATVF01000012.1| 10578 9925 -3 - 654 Transcriptional regulator, GntR family - none -
fig|6666666.65894.peg.189 CDS gi|522808890|gb|ATVF01000012.1| 10760 12025 2 + 1266 FIG00545033: hypothetical protein - none -
fig|6666666.65894.peg.190 CDS gi|522808890|gb|ATVF01000012.1| 12089 12847 2 + 759 Lactam utilization protein LamB EC699-706
fig|6666666.65894.peg.191 CDS gi|522808890|gb|ATVF01000012.1| 12837 13490 3 + 654 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) EC699-706
fig|6666666.65894.peg.192 CDS gi|522808890|gb|ATVF01000012.1| 13487 14377 2 + 891 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) EC699-706
fig|6666666.65894.peg.193 CDS gi|522808890|gb|ATVF01000012.1| 14905 14381 -1 - 525 sortase or related acyltransferase - none -
fig|6666666.65894.peg.194 CDS gi|522808890|gb|ATVF01000012.1| 15637 14963 -1 - 675 putative LysR-family transcriptional regulator - none -
fig|6666666.65894.peg.195 CDS gi|522808890|gb|ATVF01000012.1| 15701 16048 2 + 348 FIG00546727: hypothetical protein - none -
fig|6666666.65894.peg.196 CDS gi|522808890|gb|ATVF01000012.1| 16770 16045 -3 - 726 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65894.peg.197 CDS gi|522808890|gb|ATVF01000012.1| 18629 16767 -2 - 1863 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65894.peg.198 CDS gi|522808890|gb|ATVF01000012.1| 20010 18706 -3 - 1305 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.65894.peg.199 CDS gi|522808890|gb|ATVF01000012.1| 20219 21214 2 + 996 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65894.peg.200 CDS gi|522808890|gb|ATVF01000012.1| 21834 21316 -3 - 519 FIG00544436: hypothetical protein - none -
fig|6666666.65894.peg.201 CDS gi|522808890|gb|ATVF01000012.1| 22672 21902 -1 - 771 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65894.peg.202 CDS gi|522808890|gb|ATVF01000012.1| 23835 22735 -3 - 1101 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.203 CDS gi|522808890|gb|ATVF01000012.1| 23839 23955 1 + 117 hypothetical protein - none -
fig|6666666.65894.peg.204 CDS gi|522808890|gb|ATVF01000012.1| 24362 24042 -2 - 321 FIG00543949: hypothetical protein - none -
fig|6666666.65894.peg.205 CDS gi|522808890|gb|ATVF01000012.1| 25277 24402 -2 - 876 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65894.peg.206 CDS gi|522808890|gb|ATVF01000012.1| 25520 25404 -2 - 117 hypothetical protein - none -
fig|6666666.65894.peg.207 CDS gi|522808890|gb|ATVF01000012.1| 25612 25956 1 + 345 FIG00544319: hypothetical protein - none -
fig|6666666.65894.peg.208 CDS gi|522808890|gb|ATVF01000012.1| 26132 26656 2 + 525 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65894.peg.209 CDS gi|522808890|gb|ATVF01000012.1| 26672 27124 2 + 453 FIG00545488: hypothetical protein - none -
fig|6666666.65894.peg.210 CDS gi|522808890|gb|ATVF01000012.1| 27870 27190 -3 - 681 FIG00543890: hypothetical protein - none -
fig|6666666.65894.peg.211 CDS gi|522808890|gb|ATVF01000012.1| 27901 28047 1 + 147 hypothetical protein - none -
fig|6666666.65894.peg.212 CDS gi|522808890|gb|ATVF01000012.1| 29084 28119 -2 - 966 Transcriptional regulator, AraC family - none -
fig|6666666.65894.peg.213 CDS gi|522808890|gb|ATVF01000012.1| 29321 30400 2 + 1080 Oxidoreductase - none -
fig|6666666.65894.peg.214 CDS gi|522808890|gb|ATVF01000012.1| 30428 31141 2 + 714 Oxidoreductase homolog - none -
fig|6666666.65894.peg.215 CDS gi|522808890|gb|ATVF01000012.1| 32010 31240 -3 - 771 hypothetical protein - none -
fig|6666666.65894.peg.216 CDS gi|522808890|gb|ATVF01000012.1| 32366 32163 -2 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65894.peg.217 CDS gi|522808890|gb|ATVF01000012.1| 34137 33181 -3 - 957 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65894.peg.218 CDS gi|522808890|gb|ATVF01000012.1| 34691 34137 -2 - 555 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65894.peg.219 CDS gi|522808890|gb|ATVF01000012.1| 35297 34740 -2 - 558 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65894.peg.220 CDS gi|522808890|gb|ATVF01000012.1| 36692 35415 -2 - 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65894.peg.221 CDS gi|522808890|gb|ATVF01000012.1| 36798 36685 -3 - 114 hypothetical protein - none -
fig|6666666.65894.peg.222 CDS gi|522808890|gb|ATVF01000012.1| 37782 36949 -3 - 834 FIG00545464: hypothetical protein - none -
fig|6666666.65894.peg.223 CDS gi|522808890|gb|ATVF01000012.1| 38034 38414 3 + 381 FIG00547647: hypothetical protein - none -
fig|6666666.65894.peg.224 CDS gi|522808890|gb|ATVF01000012.1| 38565 38945 3 + 381 hypothetical protein - none -
fig|6666666.65894.peg.225 CDS gi|522808890|gb|ATVF01000012.1| 39515 38925 -2 - 591 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65894.peg.226 CDS gi|522808890|gb|ATVF01000012.1| 39727 39527 -1 - 201 hypothetical protein - none -
fig|6666666.65894.peg.227 CDS gi|522808890|gb|ATVF01000012.1| 39821 41314 2 + 1494 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Polyamine Metabolism
fig|6666666.65894.peg.228 CDS gi|522808890|gb|ATVF01000012.1| 41414 42703 2 + 1290 FIG00547422: hypothetical protein - none -
fig|6666666.65894.peg.229 CDS gi|522808890|gb|ATVF01000012.1| 42703 45213 1 + 2511 Putative membrane protein - none -
fig|6666666.65894.peg.230 CDS gi|522808890|gb|ATVF01000012.1| 48840 45187 -3 - 3654 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.65894.peg.231 CDS gi|522808890|gb|ATVF01000012.1| 49511 48837 -2 - 675 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.232 CDS gi|522808890|gb|ATVF01000012.1| 50092 49835 -1 - 258 hypothetical protein - none -
fig|6666666.65894.peg.233 CDS gi|522808890|gb|ATVF01000012.1| 52000 50267 -1 - 1734 ABC-type transport system TetB - none -
fig|6666666.65894.peg.234 CDS gi|522808890|gb|ATVF01000012.1| 53421 51997 -3 - 1425 FIG00547058: hypothetical protein - none -
fig|6666666.65894.peg.235 CDS gi|522808890|gb|ATVF01000012.1| 54590 53484 -2 - 1107 hypothetical protein - none -
fig|6666666.65894.peg.236 CDS gi|522808890|gb|ATVF01000012.1| 56181 54688 -3 - 1494 Multicopper oxidase Copper homeostasis
fig|6666666.65894.peg.237 CDS gi|522808890|gb|ATVF01000012.1| 56260 57489 1 + 1230 Putative membrane protein - none -
fig|6666666.65894.peg.238 CDS gi|522808890|gb|ATVF01000012.1| 57600 59057 3 + 1458 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65894.peg.239 CDS gi|522808890|gb|ATVF01000012.1| 59069 60046 2 + 978 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.65894.peg.240 CDS gi|522808890|gb|ATVF01000012.1| 60051 60779 3 + 729 FIG00545789: hypothetical protein - none -
fig|6666666.65894.peg.241 CDS gi|522808890|gb|ATVF01000012.1| 61338 61949 3 + 612 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65894.peg.242 CDS gi|522808890|gb|ATVF01000012.1| 62078 62608 2 + 531 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65894.peg.243 CDS gi|522808890|gb|ATVF01000012.1| 62798 62613 -2 - 186 hypothetical protein - none -
fig|6666666.65894.peg.244 CDS gi|522808890|gb|ATVF01000012.1| 62993 62808 -2 - 186 FIG00544981: hypothetical protein - none -
fig|6666666.65894.peg.245 CDS gi|522808890|gb|ATVF01000012.1| 64525 63083 -1 - 1443 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65894.peg.246 CDS gi|522808890|gb|ATVF01000012.1| 65599 64568 -1 - 1032 2-nitropropane dioxygenase (EC 1.13.11.32) - none -
fig|6666666.65894.peg.247 CDS gi|522808890|gb|ATVF01000012.1| 65607 66236 3 + 630 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65894.peg.248 CDS gi|522808890|gb|ATVF01000012.1| 66930 66229 -3 - 702 Urea ABC transporter, ATPase protein UrtE Urea decomposition
fig|6666666.65894.peg.249 CDS gi|522808890|gb|ATVF01000012.1| 67667 66930 -2 - 738 Urea ABC transporter, ATPase protein UrtD Urea decomposition
fig|6666666.65894.peg.250 CDS gi|522808890|gb|ATVF01000012.1| 68788 67664 -1 - 1125 Urea ABC transporter, permease protein UrtC Urea decomposition
fig|6666666.65894.peg.251 CDS gi|522808890|gb|ATVF01000012.1| 69669 68785 -3 - 885 Urea ABC transporter, permease protein UrtB Urea decomposition
fig|6666666.65894.peg.252 CDS gi|522808890|gb|ATVF01000012.1| 70996 69692 -1 - 1305 Urea ABC transporter, substrate binding protein UrtA Urea decomposition
fig|6666666.65894.peg.253 CDS gi|522808890|gb|ATVF01000012.1| 71993 71133 -2 - 861 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65894.peg.254 CDS gi|522808890|gb|ATVF01000012.1| 72606 72001 -3 - 606 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65894.peg.255 CDS gi|522808890|gb|ATVF01000012.1| 73259 72615 -2 - 645 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65894.peg.256 CDS gi|522808890|gb|ATVF01000012.1| 73743 73294 -3 - 450 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65894.peg.257 CDS gi|522808890|gb|ATVF01000012.1| 75469 73754 -1 - 1716 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65894.peg.258 CDS gi|522808890|gb|ATVF01000012.1| 75878 75570 -2 - 309 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65894.peg.259 CDS gi|522808890|gb|ATVF01000012.1| 76321 76046 -1 - 276 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65894.peg.260 CDS gi|522808890|gb|ATVF01000012.1| 76599 78248 3 + 1650 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65894.peg.261 CDS gi|522808890|gb|ATVF01000012.1| 78965 78372 -2 - 594 hypothetical protein - none -
fig|6666666.65894.peg.262 CDS gi|522808892|gb|ATVF01000011.1| 451 1614 1 + 1164 PLP-dependent aminotransferase - none -
fig|6666666.65894.peg.263 CDS gi|522808892|gb|ATVF01000011.1| 2252 1611 -2 - 642 FIG00546748: hypothetical protein - none -
fig|6666666.65894.peg.264 CDS gi|522808892|gb|ATVF01000011.1| 3986 2253 -2 - 1734 DNA repair helicase - none -
fig|6666666.65894.peg.265 CDS gi|522808892|gb|ATVF01000011.1| 6240 4039 -3 - 2202 FIG00545438: hypothetical protein - none -
fig|6666666.65894.peg.266 CDS gi|522808892|gb|ATVF01000011.1| 6305 6493 2 + 189 FIG00543815: hypothetical protein - none -
fig|6666666.65894.peg.267 CDS gi|522808892|gb|ATVF01000011.1| 7162 6587 -1 - 576 FIG00996461: hypothetical protein - none -
fig|6666666.65894.peg.268 CDS gi|522808892|gb|ATVF01000011.1| 7726 8094 1 + 369 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65894.peg.269 CDS gi|522808892|gb|ATVF01000011.1| 8674 8138 -1 - 537 FIG00545981: hypothetical protein - none -
fig|6666666.65894.peg.270 CDS gi|522808892|gb|ATVF01000011.1| 9459 8686 -3 - 774 glutamine cyclotransferase - none -
fig|6666666.65894.peg.271 CDS gi|522808892|gb|ATVF01000011.1| 10181 9480 -2 - 702 Aminodeoxychorismate lyase (EC 4.1.3.38) # PabAc Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65894.peg.272 CDS gi|522808892|gb|ATVF01000011.1| 10501 11961 1 + 1461 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65894.peg.273 CDS gi|522808892|gb|ATVF01000011.1| 11961 12803 3 + 843 putative rRNA methylase - none -
fig|6666666.65894.peg.274 CDS gi|522808892|gb|ATVF01000011.1| 13663 12800 -1 - 864 FIG00544583: hypothetical protein - none -
fig|6666666.65894.peg.275 CDS gi|522808892|gb|ATVF01000011.1| 14566 13673 -1 - 894 FIG00545091: hypothetical protein - none -
fig|6666666.65894.peg.276 CDS gi|522808892|gb|ATVF01000011.1| 15803 14673 -2 - 1131 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65894.peg.277 CDS gi|522808892|gb|ATVF01000011.1| 16490 17806 2 + 1317 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
TCA Cycle
fig|6666666.65894.peg.278 CDS gi|522808892|gb|ATVF01000011.1| 17941 18297 1 + 357 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65894.peg.279 CDS gi|522808892|gb|ATVF01000011.1| 18391 19260 1 + 870 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65894.peg.280 CDS gi|522808892|gb|ATVF01000011.1| 19708 19989 1 + 282 FIG00544151: hypothetical protein - none -
fig|6666666.65894.peg.281 CDS gi|522808892|gb|ATVF01000011.1| 19996 21645 1 + 1650 putative transport protein - none -
fig|6666666.65894.peg.282 CDS gi|522808892|gb|ATVF01000011.1| 21771 22529 3 + 759 FIG00544899: hypothetical protein - none -
fig|6666666.65894.peg.283 CDS gi|522808892|gb|ATVF01000011.1| 23363 22530 -2 - 834 Putative secreted protein - none -
fig|6666666.65894.peg.284 CDS gi|522808892|gb|ATVF01000011.1| 23637 32537 3 + 8901 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65894.peg.285 CDS gi|522808892|gb|ATVF01000011.1| 32859 33119 3 + 261 FIG00544401: hypothetical protein - none -
fig|6666666.65894.peg.286 CDS gi|522808892|gb|ATVF01000011.1| 33355 33116 -1 - 240 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65894.peg.287 CDS gi|522808892|gb|ATVF01000011.1| 33818 33360 -2 - 459 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65894.peg.288 CDS gi|522808892|gb|ATVF01000011.1| 34615 33815 -1 - 801 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.65894.peg.289 CDS gi|522808892|gb|ATVF01000011.1| 35415 34657 -3 - 759 inositol monophosphatase family protein - none -
fig|6666666.65894.peg.290 CDS gi|522808892|gb|ATVF01000011.1| 35450 39994 2 + 4545 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65894.peg.291 CDS gi|522808892|gb|ATVF01000011.1| 40004 40777 2 + 774 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65894.peg.292 CDS gi|522808892|gb|ATVF01000011.1| 40741 41154 1 + 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65894.peg.293 CDS gi|522808892|gb|ATVF01000011.1| 41830 41132 -1 - 699 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65894.peg.294 CDS gi|522808892|gb|ATVF01000011.1| 43122 41944 -3 - 1179 putative transport protein - none -
fig|6666666.65894.peg.295 CDS gi|522808892|gb|ATVF01000011.1| 44767 43145 -1 - 1623 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65894.peg.296 CDS gi|522808892|gb|ATVF01000011.1| 46037 44886 -2 - 1152 FIG00546706: hypothetical protein - none -
fig|6666666.65894.peg.297 CDS gi|522808892|gb|ATVF01000011.1| 46496 46191 -2 - 306 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65894.peg.298 CDS gi|522808892|gb|ATVF01000011.1| 46565 48814 2 + 2250 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65894.peg.299 CDS gi|522808892|gb|ATVF01000011.1| 49654 48875 -1 - 780 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65894.peg.300 CDS gi|522808892|gb|ATVF01000011.1| 49719 49835 3 + 117 hypothetical protein - none -
fig|6666666.65894.peg.301 CDS gi|522808892|gb|ATVF01000011.1| 49982 51181 2 + 1200 FIG021574: Possible membrane protein related to de Novo purine biosynthesis A hypothetical coupled to de Novo Purine Biosynthesis
fig|6666666.65894.peg.302 CDS gi|522808892|gb|ATVF01000011.1| 51183 51782 3 + 600 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65894.peg.303 CDS gi|522808892|gb|ATVF01000011.1| 51789 53351 3 + 1563 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65894.peg.304 CDS gi|522808892|gb|ATVF01000011.1| 53411 54217 2 + 807 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.65894.peg.305 CDS gi|522808892|gb|ATVF01000011.1| 54860 54195 -2 - 666 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.306 CDS gi|522808892|gb|ATVF01000011.1| 55803 54943 -3 - 861 No significant database matches - none -
fig|6666666.65894.peg.307 CDS gi|522808892|gb|ATVF01000011.1| 56191 55940 -1 - 252 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.65894.peg.308 CDS gi|522808892|gb|ATVF01000011.1| 56509 56204 -1 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.65894.peg.309 CDS gi|522808892|gb|ATVF01000011.1| 56677 56513 -1 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65894.peg.310 CDS gi|522808892|gb|ATVF01000011.1| 56817 56677 -3 - 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65894.peg.311 CDS gi|522808892|gb|ATVF01000011.1| 57279 57545 3 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65894.peg.312 CDS gi|522808892|gb|ATVF01000011.1| 57557 57730 2 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65894.peg.313 CDS gi|522808892|gb|ATVF01000011.1| 57936 58631 3 + 696 two-component system, response regulator - none -
fig|6666666.65894.peg.314 CDS gi|522808892|gb|ATVF01000011.1| 58628 60064 2 + 1437 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.65894.peg.315 CDS gi|522808892|gb|ATVF01000011.1| 60143 61384 2 + 1242 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.65894.peg.316 CDS gi|522808892|gb|ATVF01000011.1| 61439 62026 2 + 588 molybdopterin biosynthesis enzyme - none -
fig|6666666.65894.peg.317 CDS gi|522808892|gb|ATVF01000011.1| 62039 62221 2 + 183 hypothetical protein - none -
fig|6666666.65894.peg.318 CDS gi|522808892|gb|ATVF01000011.1| 62684 62271 -2 - 414 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65894.peg.319 CDS gi|522808892|gb|ATVF01000011.1| 63404 62769 -2 - 636 FIG00546567: hypothetical protein - none -
fig|6666666.65894.peg.320 CDS gi|522808892|gb|ATVF01000011.1| 63995 63420 -2 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.65894.peg.321 CDS gi|522808892|gb|ATVF01000011.1| 64068 65003 3 + 936 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65894.peg.322 CDS gi|522808892|gb|ATVF01000011.1| 65031 66290 3 + 1260 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.65894.peg.323 CDS gi|522808892|gb|ATVF01000011.1| 66440 66958 2 + 519 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.65894.peg.324 CDS gi|522808892|gb|ATVF01000011.1| 67051 67974 1 + 924 FIG00544639: hypothetical protein - none -
fig|6666666.65894.peg.325 CDS gi|522808892|gb|ATVF01000011.1| 68040 68432 3 + 393 FIG00544115: hypothetical protein - none -
fig|6666666.65894.peg.326 CDS gi|522808892|gb|ATVF01000011.1| 68425 69090 1 + 666 hypothetical membrane protein - none -
fig|6666666.65894.peg.327 CDS gi|522808892|gb|ATVF01000011.1| 69112 70275 1 + 1164 putative amylase - none -
fig|6666666.65894.peg.328 CDS gi|522808892|gb|ATVF01000011.1| 71776 70262 -1 - 1515 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65894.peg.329 CDS gi|522808892|gb|ATVF01000011.1| 71869 72714 1 + 846 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65894.peg.330 CDS gi|522808892|gb|ATVF01000011.1| 72857 74650 2 + 1794 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65894.peg.331 CDS gi|522808892|gb|ATVF01000011.1| 74815 76533 1 + 1719 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65894.peg.332 CDS gi|522808892|gb|ATVF01000011.1| 76633 78684 1 + 2052 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.65894.peg.333 CDS gi|522808892|gb|ATVF01000011.1| 79351 78671 -1 - 681 FIG00548678: hypothetical protein - none -
fig|6666666.65894.peg.334 CDS gi|522808892|gb|ATVF01000011.1| 79310 80134 2 + 825 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65894.peg.335 CDS gi|522808892|gb|ATVF01000011.1| 80315 81466 2 + 1152 Cell wall-binding protein - none -
fig|6666666.65894.peg.336 CDS gi|522808892|gb|ATVF01000011.1| 81503 82369 2 + 867 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.65894.peg.337 CDS gi|522808892|gb|ATVF01000011.1| 82370 83308 2 + 939 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65894.peg.338 CDS gi|522808892|gb|ATVF01000011.1| 83341 85146 1 + 1806 ABC transporter, ATP-binding protein - none -
fig|6666666.65894.peg.339 CDS gi|522808892|gb|ATVF01000011.1| 85439 86035 2 + 597 DUF1541 domain-containing protein - none -
fig|6666666.65894.peg.340 CDS gi|522808892|gb|ATVF01000011.1| 86105 86227 2 + 123 hypothetical protein - none -
fig|6666666.65894.peg.341 CDS gi|522808892|gb|ATVF01000011.1| 86254 88176 1 + 1923 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65894.peg.342 CDS gi|522808892|gb|ATVF01000011.1| 88237 88572 1 + 336 FIG00544339: hypothetical protein - none -
fig|6666666.65894.peg.343 CDS gi|522808892|gb|ATVF01000011.1| 88648 88971 1 + 324 FIG00546704: hypothetical protein - none -
fig|6666666.65894.peg.344 CDS gi|522808892|gb|ATVF01000011.1| 89098 90021 1 + 924 FIG00545275: hypothetical protein - none -
fig|6666666.65894.peg.345 CDS gi|522808892|gb|ATVF01000011.1| 90874 90074 -1 - 801 FIG00544241: hypothetical protein - none -
fig|6666666.65894.peg.346 CDS gi|522808892|gb|ATVF01000011.1| 90956 91972 2 + 1017 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65894.peg.347 CDS gi|522808892|gb|ATVF01000011.1| 93919 92714 -1 - 1206 FIG00544244: hypothetical protein - none -
fig|6666666.65894.peg.348 CDS gi|522808892|gb|ATVF01000011.1| 94046 95413 2 + 1368 FIG00548782: hypothetical protein - none -
fig|6666666.65894.peg.349 CDS gi|522808892|gb|ATVF01000011.1| 96058 95477 -1 - 582 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.350 CDS gi|522808892|gb|ATVF01000011.1| 98420 96042 -2 - 2379 FIG00548670: hypothetical protein - none -
fig|6666666.65894.peg.351 CDS gi|522808892|gb|ATVF01000011.1| 98629 99150 1 + 522 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.65894.peg.352 CDS gi|522808892|gb|ATVF01000011.1| 99260 99919 2 + 660 FIG00545707: hypothetical protein - none -
fig|6666666.65894.peg.353 CDS gi|522808892|gb|ATVF01000011.1| 100647 99916 -3 - 732 hypothetical protein - none -
fig|6666666.65894.peg.354 CDS gi|522808892|gb|ATVF01000011.1| 100769 100656 -2 - 114 hypothetical protein - none -
fig|6666666.65894.peg.355 CDS gi|522808892|gb|ATVF01000011.1| 101961 101191 -3 - 771 hypothetical protein - none -
fig|6666666.65894.peg.356 CDS gi|522808894|gb|ATVF01000010.1| 1664 3064 2 + 1401 Tyrosine-protein kinase Wzc (EC 2.7.10.2) - none -
fig|6666666.65894.peg.357 CDS gi|522808894|gb|ATVF01000010.1| 3201 3656 3 + 456 putative protein tyrosine phosphatase - none -
fig|6666666.65894.peg.358 CDS gi|522808894|gb|ATVF01000010.1| 3718 3837 1 + 120 hypothetical protein - none -
fig|6666666.65894.peg.359 CDS gi|522808894|gb|ATVF01000010.1| 3981 5795 3 + 1815 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.65894.peg.360 CDS gi|522808894|gb|ATVF01000010.1| 5796 6956 3 + 1161 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase N-linked Glycosylation in Bacteria
fig|6666666.65894.peg.361 CDS gi|522808894|gb|ATVF01000010.1| 6943 7557 1 + 615 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.65894.peg.362 CDS gi|522808894|gb|ATVF01000010.1| 8327 9475 2 + 1149 hypothetical protein - none -
fig|6666666.65894.peg.363 CDS gi|522808894|gb|ATVF01000010.1| 9602 10399 2 + 798 Glycosyltransferase - none -
fig|6666666.65894.peg.364 CDS gi|522808894|gb|ATVF01000010.1| 10599 11765 3 + 1167 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65894.peg.365 CDS gi|522808894|gb|ATVF01000010.1| 11872 13344 1 + 1473 GumJ protein - none -
fig|6666666.65894.peg.366 CDS gi|522808894|gb|ATVF01000010.1| 13415 14713 2 + 1299 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65894.peg.367 CDS gi|522808894|gb|ATVF01000010.1| 14710 15744 1 + 1035 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65894.peg.368 CDS gi|522808894|gb|ATVF01000010.1| 15744 16739 3 + 996 glycosyltransferase - none -
fig|6666666.65894.peg.369 CDS gi|522808894|gb|ATVF01000010.1| 16938 18164 3 + 1227 hypothetical protein - none -
fig|6666666.65894.peg.370 CDS gi|522808894|gb|ATVF01000010.1| 18568 18452 -1 - 117 hypothetical protein - none -
fig|6666666.65894.peg.371 CDS gi|522808894|gb|ATVF01000010.1| 18709 20118 1 + 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.65894.peg.372 CDS gi|522808894|gb|ATVF01000010.1| 20243 21169 2 + 927 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65894.peg.373 CDS gi|522808894|gb|ATVF01000010.1| 21230 21727 2 + 498 Transcriptional regulator - none -
fig|6666666.65894.peg.374 CDS gi|522808894|gb|ATVF01000010.1| 21847 23427 1 + 1581 hypothetical protein - none -
fig|6666666.65894.peg.375 CDS gi|522808894|gb|ATVF01000010.1| 24894 23497 -3 - 1398 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.65894.peg.376 CDS gi|522808894|gb|ATVF01000010.1| 25089 24946 -3 - 144 hypothetical protein - none -
fig|6666666.65894.peg.377 CDS gi|522808894|gb|ATVF01000010.1| 25344 26117 3 + 774 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65894.peg.378 CDS gi|522808894|gb|ATVF01000010.1| 26137 28149 1 + 2013 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.65894.peg.379 CDS gi|522808894|gb|ATVF01000010.1| 28149 28898 3 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65894.peg.380 CDS gi|522808894|gb|ATVF01000010.1| 28977 29315 3 + 339 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.65894.peg.381 CDS gi|522808894|gb|ATVF01000010.1| 30538 29552 -1 - 987 FIG00547005: hypothetical protein - none -
fig|6666666.65894.peg.382 CDS gi|522808894|gb|ATVF01000010.1| 30601 31920 1 + 1320 FIG00544632: hypothetical protein - none -
fig|6666666.65894.peg.383 CDS gi|522808894|gb|ATVF01000010.1| 31932 32330 3 + 399 FIG00545952: hypothetical protein - none -
fig|6666666.65894.peg.384 CDS gi|522808894|gb|ATVF01000010.1| 32349 32654 3 + 306 FIG00544086: hypothetical protein - none -
fig|6666666.65894.peg.385 CDS gi|522808894|gb|ATVF01000010.1| 32748 32948 3 + 201 hypothetical protein - none -
fig|6666666.65894.peg.386 CDS gi|522808894|gb|ATVF01000010.1| 33133 33774 1 + 642 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.387 CDS gi|522808894|gb|ATVF01000010.1| 33783 35432 3 + 1650 Permeases of the major facilitator superfamily - none -
fig|6666666.65894.peg.388 CDS gi|522808894|gb|ATVF01000010.1| 35432 37078 2 + 1647 Permeases of the major facilitator superfamily - none -
fig|6666666.65894.peg.389 CDS gi|522808894|gb|ATVF01000010.1| 38042 37128 -2 - 915 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.65894.peg.390 CDS gi|522808894|gb|ATVF01000010.1| 38072 38755 2 + 684 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65894.peg.391 CDS gi|522808894|gb|ATVF01000010.1| 39217 38807 -1 - 411 hypothetical protein - none -
fig|6666666.65894.peg.392 CDS gi|522808894|gb|ATVF01000010.1| 39537 39223 -3 - 315 hypothetical protein - none -
fig|6666666.65894.peg.393 CDS gi|522808894|gb|ATVF01000010.1| 41774 39534 -2 - 2241 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65894.peg.394 CDS gi|522808894|gb|ATVF01000010.1| 42705 41890 -3 - 816 hypothetical protein - none -
fig|6666666.65894.peg.395 CDS gi|522808894|gb|ATVF01000010.1| 43759 43121 -1 - 639 Uncharacterized protein SCO4203 - none -
fig|6666666.65894.peg.396 CDS gi|522808894|gb|ATVF01000010.1| 44464 43961 -1 - 504 FIG00546961: hypothetical protein - none -
fig|6666666.65894.peg.397 CDS gi|522808894|gb|ATVF01000010.1| 44489 45595 2 + 1107 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65894.peg.398 CDS gi|522808894|gb|ATVF01000010.1| 45588 46229 3 + 642 FIG00545254: hypothetical protein - none -
fig|6666666.65894.peg.399 CDS gi|522808894|gb|ATVF01000010.1| 47981 46275 -2 - 1707 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.65894.peg.400 CDS gi|522808894|gb|ATVF01000010.1| 48079 49350 1 + 1272 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65894.peg.401 CDS gi|522808894|gb|ATVF01000010.1| 49411 50157 1 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65894.peg.402 CDS gi|522808894|gb|ATVF01000010.1| 50168 51409 2 + 1242 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65894.peg.403 CDS gi|522808894|gb|ATVF01000010.1| 51406 52101 1 + 696 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65894.peg.404 CDS gi|522808894|gb|ATVF01000010.1| 52378 53274 1 + 897 hypothetical protein - none -
fig|6666666.65894.peg.405 CDS gi|522808894|gb|ATVF01000010.1| 55841 53271 -2 - 2571 FIG00547394: hypothetical protein - none -
fig|6666666.65894.peg.406 CDS gi|522808894|gb|ATVF01000010.1| 56941 56024 -1 - 918 FIG00543972: hypothetical protein - none -
fig|6666666.65894.peg.407 CDS gi|522808894|gb|ATVF01000010.1| 56996 57904 2 + 909 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65894.peg.408 CDS gi|522808894|gb|ATVF01000010.1| 57930 58742 3 + 813 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.65894.peg.409 CDS gi|522808894|gb|ATVF01000010.1| 58793 59605 2 + 813 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65894.peg.410 CDS gi|522808894|gb|ATVF01000010.1| 59852 60043 2 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65894.peg.411 CDS gi|522808894|gb|ATVF01000010.1| 60190 60417 1 + 228 hypothetical protein - none -
fig|6666666.65894.peg.412 CDS gi|522808894|gb|ATVF01000010.1| 61535 60471 -2 - 1065 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65894.peg.413 CDS gi|522808894|gb|ATVF01000010.1| 61759 61983 1 + 225 Glutaredoxin-like domain protein - none -
fig|6666666.65894.peg.414 CDS gi|522808894|gb|ATVF01000010.1| 62069 63463 2 + 1395 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.415 CDS gi|522808894|gb|ATVF01000010.1| 63465 64361 3 + 897 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.416 CDS gi|522808894|gb|ATVF01000010.1| 65052 65429 3 + 378 FIG00548314: hypothetical protein - none -
fig|6666666.65894.peg.417 CDS gi|522808894|gb|ATVF01000010.1| 65507 66040 2 + 534 ThiJ/PfpI family protein - none -
fig|6666666.65894.peg.418 CDS gi|522808894|gb|ATVF01000010.1| 66107 66547 2 + 441 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65894.peg.419 CDS gi|522808894|gb|ATVF01000010.1| 66871 66575 -1 - 297 hypothetical protein - none -
fig|6666666.65894.peg.420 CDS gi|522808894|gb|ATVF01000010.1| 67370 69154 2 + 1785 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.421 CDS gi|522808894|gb|ATVF01000010.1| 69182 69607 2 + 426 FIG00546920: hypothetical protein - none -
fig|6666666.65894.peg.422 CDS gi|522808894|gb|ATVF01000010.1| 69689 70702 2 + 1014 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.65894.peg.423 CDS gi|522808894|gb|ATVF01000010.1| 70743 71339 3 + 597 FIG00543961: hypothetical protein - none -
fig|6666666.65894.peg.424 CDS gi|522808894|gb|ATVF01000010.1| 71454 71879 3 + 426 TerC family integral membrane protein - none -
fig|6666666.65894.peg.425 CDS gi|522808894|gb|ATVF01000010.1| 71951 74587 2 + 2637 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65894.peg.426 CDS gi|522808894|gb|ATVF01000010.1| 74737 75813 1 + 1077 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.427 CDS gi|522808894|gb|ATVF01000010.1| 75928 77289 1 + 1362 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.428 CDS gi|522808894|gb|ATVF01000010.1| 77408 78739 2 + 1332 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.429 CDS gi|522808894|gb|ATVF01000010.1| 78752 79360 2 + 609 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.65894.peg.430 CDS gi|522808894|gb|ATVF01000010.1| 79367 79990 2 + 624 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65894.peg.431 CDS gi|522808894|gb|ATVF01000010.1| 79991 80797 2 + 807 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65894.peg.432 CDS gi|522808894|gb|ATVF01000010.1| 80852 82477 2 + 1626 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65894.peg.433 CDS gi|522808894|gb|ATVF01000010.1| 82593 82474 -3 - 120 hypothetical protein - none -
fig|6666666.65894.peg.434 CDS gi|522808894|gb|ATVF01000010.1| 82592 83599 2 + 1008 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65894.peg.435 CDS gi|522808894|gb|ATVF01000010.1| 84040 83660 -1 - 381 putative transcription repressor - none -
fig|6666666.65894.peg.436 CDS gi|522808894|gb|ATVF01000010.1| 84473 84141 -2 - 333 FIG00544106: hypothetical protein - none -
fig|6666666.65894.peg.437 CDS gi|522808894|gb|ATVF01000010.1| 84564 84884 3 + 321 FIG00544880: hypothetical protein - none -
fig|6666666.65894.peg.438 CDS gi|522808894|gb|ATVF01000010.1| 85799 84888 -2 - 912 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65894.peg.439 CDS gi|522808894|gb|ATVF01000010.1| 85831 85959 1 + 129 hypothetical protein - none -
fig|6666666.65894.peg.440 CDS gi|522808894|gb|ATVF01000010.1| 85995 86861 3 + 867 FIG00544751: hypothetical protein - none -
fig|6666666.65894.peg.441 CDS gi|522808894|gb|ATVF01000010.1| 87988 86858 -1 - 1131 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65894.peg.442 CDS gi|522808894|gb|ATVF01000010.1| 88119 87985 -3 - 135 hypothetical protein - none -
fig|6666666.65894.peg.443 CDS gi|522808894|gb|ATVF01000010.1| 88487 88080 -2 - 408 FIG00545647: hypothetical protein - none -
fig|6666666.65894.peg.444 CDS gi|522808894|gb|ATVF01000010.1| 88891 88574 -1 - 318 hypothetical protein - none -
fig|6666666.65894.peg.445 CDS gi|522808894|gb|ATVF01000010.1| 89291 89007 -2 - 285 hypothetical protein - none -
fig|6666666.65894.peg.446 CDS gi|522808894|gb|ATVF01000010.1| 90538 89291 -1 - 1248 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.65894.peg.447 CDS gi|522808894|gb|ATVF01000010.1| 91825 90866 -1 - 960 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65894.peg.448 CDS gi|522808894|gb|ATVF01000010.1| 92145 91837 -3 - 309 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) Pterin carbinolamine dehydratase
fig|6666666.65894.peg.449 CDS gi|522808894|gb|ATVF01000010.1| 92183 92782 2 + 600 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.65894.peg.450 CDS gi|522808894|gb|ATVF01000010.1| 92806 93822 1 + 1017 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65894.peg.451 CDS gi|522808894|gb|ATVF01000010.1| 93833 95461 2 + 1629 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65894.peg.452 CDS gi|522808894|gb|ATVF01000010.1| 95462 95896 2 + 435 FIG00543979: hypothetical protein - none -
fig|6666666.65894.peg.453 CDS gi|522808894|gb|ATVF01000010.1| 96026 97249 2 + 1224 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65894.peg.454 CDS gi|522808894|gb|ATVF01000010.1| 97390 98838 1 + 1449 D-serine/D-alanine/glycine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65894.peg.455 CDS gi|522808894|gb|ATVF01000010.1| 98860 99552 1 + 693 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65894.peg.456 CDS gi|522808894|gb|ATVF01000010.1| 100903 99611 -1 - 1293 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65894.peg.457 CDS gi|522808894|gb|ATVF01000010.1| 101031 100909 -3 - 123 hypothetical protein - none -
fig|6666666.65894.peg.458 CDS gi|522808894|gb|ATVF01000010.1| 101075 102127 2 + 1053 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.65894.peg.459 CDS gi|522808894|gb|ATVF01000010.1| 103488 103826 3 + 339 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65894.peg.460 CDS gi|522808894|gb|ATVF01000010.1| 104049 104912 3 + 864 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65894.peg.461 CDS gi|522808894|gb|ATVF01000010.1| 105175 105612 1 + 438 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65894.peg.462 CDS gi|522808894|gb|ATVF01000010.1| 105700 106410 1 + 711 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65894.peg.463 CDS gi|522808894|gb|ATVF01000010.1| 107382 106486 -3 - 897 Putative protease - none -
fig|6666666.65894.peg.464 CDS gi|522808894|gb|ATVF01000010.1| 107871 107431 -3 - 441 Putative membrane protein - none -
fig|6666666.65894.peg.465 CDS gi|522808898|gb|ATVF01000009.1| 734 1924 2 + 1191 hypothetical protein - none -
fig|6666666.65894.peg.466 CDS gi|522808898|gb|ATVF01000009.1| 2962 1985 -1 - 978 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65894.peg.467 CDS gi|522808898|gb|ATVF01000009.1| 4162 3545 -1 - 618 Resolvase/integrase - none -
fig|6666666.65894.peg.468 CDS gi|522808898|gb|ATVF01000009.1| 4469 4585 2 + 117 hypothetical protein - none -
fig|6666666.65894.peg.469 CDS gi|522808898|gb|ATVF01000009.1| 5033 5629 2 + 597 cadmium resistance transporter, putative - none -
fig|6666666.65894.peg.470 CDS gi|522808898|gb|ATVF01000009.1| 7633 6590 -1 - 1044 FIG00544783: hypothetical protein - none -
fig|6666666.65894.peg.471 CDS gi|522808898|gb|ATVF01000009.1| 8135 8007 -2 - 129 hypothetical protein - none -
fig|6666666.65894.peg.472 CDS gi|522808898|gb|ATVF01000009.1| 9273 8464 -3 - 810 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - none -
fig|6666666.65894.peg.473 CDS gi|522808898|gb|ATVF01000009.1| 9368 9847 2 + 480 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.474 CDS gi|522808898|gb|ATVF01000009.1| 10684 9878 -1 - 807 hypothetical protein - none -
fig|6666666.65894.peg.475 CDS gi|522808898|gb|ATVF01000009.1| 11016 11150 3 + 135 hypothetical protein - none -
fig|6666666.65894.peg.476 CDS gi|522808898|gb|ATVF01000009.1| 12133 11285 -1 - 849 hypothetical protein - none -
fig|6666666.65894.peg.477 CDS gi|522808898|gb|ATVF01000009.1| 12446 12228 -2 - 219 hypothetical protein - none -
fig|6666666.65894.peg.478 CDS gi|522808898|gb|ATVF01000009.1| 12682 12470 -1 - 213 Putative membrane protein - none -
fig|6666666.65894.peg.479 CDS gi|522808898|gb|ATVF01000009.1| 13032 12907 -3 - 126 hypothetical protein - none -
fig|6666666.65894.peg.480 CDS gi|522808898|gb|ATVF01000009.1| 14547 13039 -3 - 1509 regulatory protein - none -
fig|6666666.65894.peg.481 CDS gi|522808898|gb|ATVF01000009.1| 14690 16036 2 + 1347 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.65894.peg.482 CDS gi|522808898|gb|ATVF01000009.1| 16039 17412 1 + 1374 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65894.peg.483 CDS gi|522808898|gb|ATVF01000009.1| 17462 18733 2 + 1272 FIG00545831: hypothetical protein - none -
fig|6666666.65894.peg.484 CDS gi|522808898|gb|ATVF01000009.1| 18796 20232 1 + 1437 Phytoene dehydrogenase and related proteins Carotenoids
fig|6666666.65894.peg.485 CDS gi|522808898|gb|ATVF01000009.1| 20552 21067 2 + 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65894.peg.486 CDS gi|522808898|gb|ATVF01000009.1| 21144 21524 3 + 381 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65894.peg.487 CDS gi|522808898|gb|ATVF01000009.1| 21670 22644 1 + 975 FIG00545886: hypothetical protein - none -
fig|6666666.65894.peg.488 CDS gi|522808898|gb|ATVF01000009.1| 23331 26555 3 + 3225 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65894.peg.489 CDS gi|522808898|gb|ATVF01000009.1| 26640 30641 3 + 4002 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65894.peg.490 CDS gi|522808898|gb|ATVF01000009.1| 30819 31001 3 + 183 FIG00546500: hypothetical protein - none -
fig|6666666.65894.peg.491 CDS gi|522808898|gb|ATVF01000009.1| 31013 31795 2 + 783 putative DNA-binding protein - none -
fig|6666666.65894.peg.492 CDS gi|522808898|gb|ATVF01000009.1| 32519 31824 -2 - 696 FIG00545089: hypothetical protein - none -
fig|6666666.65894.peg.493 CDS gi|522808898|gb|ATVF01000009.1| 32847 33215 3 + 369 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.65894.peg.494 CDS gi|522808898|gb|ATVF01000009.1| 33222 33689 3 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.65894.peg.495 CDS gi|522808898|gb|ATVF01000009.1| 34036 36165 1 + 2130 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65894.peg.496 CDS gi|522808898|gb|ATVF01000009.1| 36581 36456 -2 - 126 FIG00548059: hypothetical protein - none -
fig|6666666.65894.peg.497 CDS gi|522808898|gb|ATVF01000009.1| 36546 37736 3 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65894.peg.498 CDS gi|522808898|gb|ATVF01000009.1| 37866 38567 3 + 702 hypothetical protein - none -
fig|6666666.65894.peg.499 CDS gi|522808898|gb|ATVF01000009.1| 39351 38548 -3 - 804 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65894.peg.500 CDS gi|522808898|gb|ATVF01000009.1| 40544 39378 -2 - 1167 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.65894.peg.501 CDS gi|522808898|gb|ATVF01000009.1| 41532 40549 -3 - 984 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65894.peg.502 CDS gi|522808898|gb|ATVF01000009.1| 42307 42612 1 + 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.65894.peg.503 CDS gi|522808898|gb|ATVF01000009.1| 42645 43301 3 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65894.peg.504 CDS gi|522808898|gb|ATVF01000009.1| 43298 43954 2 + 657 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65894.peg.505 CDS gi|522808898|gb|ATVF01000009.1| 43954 44259 1 + 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65894.peg.506 CDS gi|522808898|gb|ATVF01000009.1| 44284 45126 1 + 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65894.peg.507 CDS gi|522808898|gb|ATVF01000009.1| 45143 45421 2 + 279 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.65894.peg.508 CDS gi|522808898|gb|ATVF01000009.1| 45425 45787 2 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65894.peg.509 CDS gi|522808898|gb|ATVF01000009.1| 45787 46533 1 + 747 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.65894.peg.510 CDS gi|522808898|gb|ATVF01000009.1| 46536 46952 3 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65894.peg.511 CDS gi|522808898|gb|ATVF01000009.1| 46952 47182 2 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65894.peg.512 CDS gi|522808898|gb|ATVF01000009.1| 47185 47463 1 + 279 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.65894.peg.513 CDS gi|522808898|gb|ATVF01000009.1| 47836 48204 1 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65894.peg.514 CDS gi|522808898|gb|ATVF01000009.1| 48207 48521 3 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65894.peg.515 CDS gi|522808898|gb|ATVF01000009.1| 48521 49096 2 + 576 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65894.peg.516 CDS gi|522808898|gb|ATVF01000009.1| 49772 50668 2 + 897 hypothetical protein - none -
fig|6666666.65894.peg.517 CDS gi|522808898|gb|ATVF01000009.1| 51474 50665 -3 - 810 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65894.peg.518 CDS gi|522808898|gb|ATVF01000009.1| 52321 51524 -1 - 798 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.65894.peg.519 CDS gi|522808898|gb|ATVF01000009.1| 52676 53293 2 + 618 hypothetical protein - none -
fig|6666666.65894.peg.520 CDS gi|522808898|gb|ATVF01000009.1| 54236 53421 -2 - 816 Substrate-specific component CbrT of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.65894.peg.521 CDS gi|522808898|gb|ATVF01000009.1| 55918 54233 -1 - 1686 Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.65894.peg.522 CDS gi|522808898|gb|ATVF01000009.1| 57072 55915 -3 - 1158 Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.65894.peg.523 CDS gi|522808898|gb|ATVF01000009.1| 58081 57077 -1 - 1005 hypothetical protein - none -
fig|6666666.65894.peg.524 CDS gi|522808898|gb|ATVF01000009.1| 59264 58107 -2 - 1158 LPXTG-motif cell wall anchor domain - none -
fig|6666666.65894.peg.525 CDS gi|522808898|gb|ATVF01000009.1| 60033 59512 -3 - 522 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65894.peg.526 CDS gi|522808898|gb|ATVF01000009.1| 60402 60800 3 + 399 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.65894.peg.527 CDS gi|522808898|gb|ATVF01000009.1| 60819 61355 3 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65894.peg.528 CDS gi|522808898|gb|ATVF01000009.1| 61359 61763 3 + 405 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65894.peg.529 CDS gi|522808898|gb|ATVF01000009.1| 61804 62439 1 + 636 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.65894.peg.530 CDS gi|522808898|gb|ATVF01000009.1| 62443 62628 1 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65894.peg.531 CDS gi|522808898|gb|ATVF01000009.1| 62636 63082 2 + 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65894.peg.532 CDS gi|522808898|gb|ATVF01000009.1| 63452 64774 2 + 1323 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65894.peg.533 CDS gi|522808898|gb|ATVF01000009.1| 64774 65328 1 + 555 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65894.peg.534 CDS gi|522808898|gb|ATVF01000009.1| 65515 66309 1 + 795 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65894.peg.535 CDS gi|522808898|gb|ATVF01000009.1| 66429 67211 3 + 783 Putative secreted protein - none -
fig|6666666.65894.peg.536 CDS gi|522808898|gb|ATVF01000009.1| 67320 67622 3 + 303 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65894.peg.537 CDS gi|522808898|gb|ATVF01000009.1| 67809 68177 3 + 369 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.65894.peg.538 CDS gi|522808898|gb|ATVF01000009.1| 68180 68584 2 + 405 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.65894.peg.539 CDS gi|522808898|gb|ATVF01000009.1| 68608 69213 1 + 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.65894.peg.540 CDS gi|522808898|gb|ATVF01000009.1| 69321 70337 3 + 1017 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65894.peg.541 CDS gi|522808898|gb|ATVF01000009.1| 70393 70899 1 + 507 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65894.peg.542 CDS gi|522808898|gb|ATVF01000009.1| 70993 71607 1 + 615 hypothetical protein - none -
fig|6666666.65894.peg.543 CDS gi|522808898|gb|ATVF01000009.1| 71561 72439 2 + 879 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65894.peg.544 CDS gi|522808898|gb|ATVF01000009.1| 72509 74944 2 + 2436 FIG00546597: hypothetical protein - none -
fig|6666666.65894.peg.545 CDS gi|522808898|gb|ATVF01000009.1| 75072 76325 3 + 1254 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65894.peg.546 CDS gi|522808898|gb|ATVF01000009.1| 76343 77905 2 + 1563 FAD/FMN-containing dehydrogenases - none -
fig|6666666.65894.peg.547 CDS gi|522808898|gb|ATVF01000009.1| 77969 79276 2 + 1308 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65894.peg.548 CDS gi|522808898|gb|ATVF01000009.1| 79403 79831 2 + 429 FIG00544350: hypothetical protein - none -
fig|6666666.65894.peg.549 CDS gi|522808898|gb|ATVF01000009.1| 80952 79828 -3 - 1125 subtilase family protein - none -
fig|6666666.65894.peg.550 CDS gi|522808898|gb|ATVF01000009.1| 82438 81050 -1 - 1389 FIG00544388: hypothetical protein - none -
fig|6666666.65894.peg.551 CDS gi|522808898|gb|ATVF01000009.1| 82431 82592 3 + 162 hypothetical protein - none -
fig|6666666.65894.peg.552 CDS gi|522808898|gb|ATVF01000009.1| 82662 86414 3 + 3753 FtsK/SpoIIIE family protein - none -
fig|6666666.65894.peg.553 CDS gi|522808898|gb|ATVF01000009.1| 86411 87340 2 + 930 FIG00543916: hypothetical protein - none -
fig|6666666.65894.peg.554 CDS gi|522808898|gb|ATVF01000009.1| 87487 87813 1 + 327 FIG00543840: hypothetical protein - none -
fig|6666666.65894.peg.555 CDS gi|522808898|gb|ATVF01000009.1| 87839 88129 2 + 291 FIG00544893: hypothetical protein - none -
fig|6666666.65894.peg.556 CDS gi|522808898|gb|ATVF01000009.1| 88707 88297 -3 - 411 Mobile element protein - none -
fig|6666666.65894.peg.557 CDS gi|522808898|gb|ATVF01000009.1| 89505 89212 -3 - 294 Mobile element protein - none -
fig|6666666.65894.peg.558 CDS gi|522808898|gb|ATVF01000009.1| 89808 89948 3 + 141 hypothetical protein - none -
fig|6666666.65894.peg.559 CDS gi|522808898|gb|ATVF01000009.1| 90216 90073 -3 - 144 hypothetical protein - none -
fig|6666666.65894.peg.560 CDS gi|522808898|gb|ATVF01000009.1| 90218 90391 2 + 174 hypothetical protein - none -
fig|6666666.65894.peg.561 CDS gi|522808898|gb|ATVF01000009.1| 92576 91998 -2 - 579 putative exported protein - none -
fig|6666666.65894.peg.562 CDS gi|522808898|gb|ATVF01000009.1| 93215 92790 -2 - 426 putative membrane protein - none -
fig|6666666.65894.peg.563 CDS gi|522808898|gb|ATVF01000009.1| 94532 93363 -2 - 1170 hypothetical protein - none -
fig|6666666.65894.peg.564 CDS gi|522808898|gb|ATVF01000009.1| 94485 94781 3 + 297 hypothetical protein - none -
fig|6666666.65894.peg.565 CDS gi|522808898|gb|ATVF01000009.1| 96025 94943 -1 - 1083 Inner membrane protein YihY, formerly thought to be RNase BN CBSS-342610.3.peg.283;
LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.65894.peg.566 CDS gi|522808898|gb|ATVF01000009.1| 97106 96279 -2 - 828 hypothetical protein - none -
fig|6666666.65894.peg.567 CDS gi|522808898|gb|ATVF01000009.1| 98164 97535 -1 - 630 Mobile element protein - none -
fig|6666666.65894.peg.568 CDS gi|522808898|gb|ATVF01000009.1| 98503 99528 1 + 1026 hypothetical protein - none -
fig|6666666.65894.peg.569 CDS gi|522808898|gb|ATVF01000009.1| 99977 101155 2 + 1179 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.65894.peg.570 CDS gi|522808898|gb|ATVF01000009.1| 102461 102796 2 + 336 hypothetical protein - none -
fig|6666666.65894.peg.571 CDS gi|522808898|gb|ATVF01000009.1| 103134 103391 3 + 258 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.65894.peg.572 CDS gi|522808898|gb|ATVF01000009.1| 105195 104281 -3 - 915 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.65894.peg.573 CDS gi|522808898|gb|ATVF01000009.1| 105680 105252 -2 - 429 Mannose-6-phosphate isomerase - none -
fig|6666666.65894.peg.574 CDS gi|522808898|gb|ATVF01000009.1| 107615 105738 -2 - 1878 Heavy-Metal transporting ATPase - none -
fig|6666666.65894.peg.575 CDS gi|522808898|gb|ATVF01000009.1| 108409 108257 -1 - 153 hypothetical protein - none -
fig|6666666.65894.peg.576 CDS gi|522808898|gb|ATVF01000009.1| 108567 108680 3 + 114 hypothetical protein - none -
fig|6666666.65894.peg.577 CDS gi|522808898|gb|ATVF01000009.1| 109016 108780 -2 - 237 Copper chaperone Copper homeostasis
fig|6666666.65894.peg.578 CDS gi|522808898|gb|ATVF01000009.1| 109850 109173 -2 - 678 FIG00550137: hypothetical protein - none -
fig|6666666.65894.peg.579 CDS gi|522808898|gb|ATVF01000009.1| 110238 109999 -3 - 240 Copper chaperone Copper homeostasis
fig|6666666.65894.peg.580 CDS gi|522808898|gb|ATVF01000009.1| 110644 111069 1 + 426 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.65894.peg.581 CDS gi|522808898|gb|ATVF01000009.1| 111464 111745 2 + 282 hypothetical protein - none -
fig|6666666.65894.peg.582 CDS gi|522808898|gb|ATVF01000009.1| 112551 111940 -3 - 612 Resolvase/integrase Bin - none -
fig|6666666.65894.peg.583 CDS gi|522808898|gb|ATVF01000009.1| 113441 113752 2 + 312 hypothetical protein - none -
fig|6666666.65894.peg.584 CDS gi|522808898|gb|ATVF01000009.1| 113780 114490 2 + 711 Mobile element protein - none -
fig|6666666.65894.peg.585 CDS gi|522808898|gb|ATVF01000009.1| 115436 114615 -2 - 822 hypothetical protein - none -
fig|6666666.65894.peg.586 CDS gi|522808898|gb|ATVF01000009.1| 115607 115765 2 + 159 hypothetical protein - none -
fig|6666666.65894.peg.587 CDS gi|522808898|gb|ATVF01000009.1| 116983 116321 -1 - 663 hypothetical protein - none -
fig|6666666.65894.peg.588 CDS gi|522808898|gb|ATVF01000009.1| 119255 117036 -2 - 2220 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65894.peg.589 CDS gi|522808898|gb|ATVF01000009.1| 119485 119306 -1 - 180 Cation transport ATPase - none -
fig|6666666.65894.peg.590 CDS gi|522808898|gb|ATVF01000009.1| 119687 119514 -2 - 174 FIG00549418: hypothetical protein - none -
fig|6666666.65894.peg.591 CDS gi|522808898|gb|ATVF01000009.1| 120896 119697 -2 - 1200 two-component system, sensory transduction histidine kinase - none -
fig|6666666.65894.peg.592 CDS gi|522808898|gb|ATVF01000009.1| 121615 120893 -1 - 723 two-component system, response regulator - none -
fig|6666666.65894.peg.593 CDS gi|522808898|gb|ATVF01000009.1| 121661 121819 2 + 159 hypothetical protein - none -
fig|6666666.65894.peg.594 CDS gi|522808898|gb|ATVF01000009.1| 122019 122594 3 + 576 putative exported protein - none -
fig|6666666.65894.peg.595 CDS gi|522808898|gb|ATVF01000009.1| 123000 122659 -3 - 342 hypothetical protein - none -
fig|6666666.65894.peg.596 CDS gi|522808898|gb|ATVF01000009.1| 123040 124146 1 + 1107 Multicopper oxidase Copper homeostasis
fig|6666666.65894.peg.597 CDS gi|522808898|gb|ATVF01000009.1| 124161 124283 3 + 123 hypothetical protein - none -
fig|6666666.65894.peg.598 CDS gi|522808898|gb|ATVF01000009.1| 124953 125549 3 + 597 cadmium resistance transporter, putative - none -
fig|6666666.65894.peg.599 CDS gi|522808899|gb|ATVF01000008.1| 52 651 1 + 600 serine protease - none -
fig|6666666.65894.peg.600 CDS gi|522808899|gb|ATVF01000008.1| 657 2030 3 + 1374 aminopeptidase N - none -
fig|6666666.65894.peg.601 CDS gi|522808899|gb|ATVF01000008.1| 2027 3250 2 + 1224 FIG00548230: hypothetical protein - none -
fig|6666666.65894.peg.602 CDS gi|522808899|gb|ATVF01000008.1| 4040 3357 -2 - 684 Siderophore-interacting protein - none -
fig|6666666.65894.peg.603 CDS gi|522808899|gb|ATVF01000008.1| 5099 4119 -2 - 981 periplasmic component of ABC-type Fe3+-siderophore transport system - none -
fig|6666666.65894.peg.604 CDS gi|522808899|gb|ATVF01000008.1| 5627 5187 -2 - 441 hypothetical protein - none -
fig|6666666.65894.peg.605 CDS gi|522808899|gb|ATVF01000008.1| 6284 7303 2 + 1020 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65894.peg.606 CDS gi|522808899|gb|ATVF01000008.1| 7303 8658 1 + 1356 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.65894.peg.607 CDS gi|522808899|gb|ATVF01000008.1| 8659 9522 1 + 864 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65894.peg.608 CDS gi|522808899|gb|ATVF01000008.1| 10079 11392 2 + 1314 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65894.peg.609 CDS gi|522808899|gb|ATVF01000008.1| 11406 12179 3 + 774 Creatinine amidohydrolase (EC 3.5.2.10) Creatine and Creatinine Degradation
fig|6666666.65894.peg.610 CDS gi|522808899|gb|ATVF01000008.1| 12830 12393 -2 - 438 Transcriptional regulator, AraC family - none -
fig|6666666.65894.peg.611 CDS gi|522808899|gb|ATVF01000008.1| 13057 13209 1 + 153 hypothetical protein - none -
fig|6666666.65894.peg.612 CDS gi|522808899|gb|ATVF01000008.1| 13331 14392 2 + 1062 Zn-dependent alcohol dehydrogenase - none -
fig|6666666.65894.peg.613 CDS gi|522808899|gb|ATVF01000008.1| 16085 15774 -2 - 312 hypothetical protein - none -
fig|6666666.65894.peg.614 CDS gi|522808899|gb|ATVF01000008.1| 16630 16082 -1 - 549 ThiJ/PfpI family protein - none -
fig|6666666.65894.peg.615 CDS gi|522808899|gb|ATVF01000008.1| 20398 17717 -1 - 2682 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65894.peg.616 CDS gi|522808899|gb|ATVF01000008.1| 21401 22177 2 + 777 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.65894.peg.617 CDS gi|522808899|gb|ATVF01000008.1| 23725 23021 -1 - 705 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.65894.peg.618 CDS gi|522808899|gb|ATVF01000008.1| 24175 24056 -1 - 120 hypothetical protein - none -
fig|6666666.65894.peg.619 CDS gi|522808899|gb|ATVF01000008.1| 26889 24847 -3 - 2043 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.65894.peg.620 CDS gi|522808899|gb|ATVF01000008.1| 28139 27075 -2 - 1065 FIG00545756: hypothetical protein - none -
fig|6666666.65894.peg.621 CDS gi|522808899|gb|ATVF01000008.1| 29227 28169 -1 - 1059 FIG00547241: hypothetical protein - none -
fig|6666666.65894.peg.622 CDS gi|522808899|gb|ATVF01000008.1| 29307 30017 3 + 711 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65894.peg.623 CDS gi|522808899|gb|ATVF01000008.1| 30014 30379 2 + 366 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65894.peg.624 CDS gi|522808899|gb|ATVF01000008.1| 31445 30510 -2 - 936 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.65894.peg.625 CDS gi|522808899|gb|ATVF01000008.1| 32669 31467 -2 - 1203 FIG00547211: hypothetical protein - none -
fig|6666666.65894.peg.626 CDS gi|522808899|gb|ATVF01000008.1| 33429 32794 -3 - 636 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.65894.peg.627 CDS gi|522808899|gb|ATVF01000008.1| 34535 33429 -2 - 1107 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.65894.peg.628 CDS gi|522808899|gb|ATVF01000008.1| 35192 34665 -2 - 528 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65894.peg.629 CDS gi|522808899|gb|ATVF01000008.1| 36883 35639 -1 - 1245 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65894.peg.630 CDS gi|522808899|gb|ATVF01000008.1| 37030 38454 1 + 1425 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65894.peg.631 CDS gi|522808899|gb|ATVF01000008.1| 38822 38676 -2 - 147 hypothetical protein - none -
fig|6666666.65894.peg.632 CDS gi|522808899|gb|ATVF01000008.1| 41417 38847 -2 - 2571 hypothetical protein - none -
fig|6666666.65894.peg.633 CDS gi|522808899|gb|ATVF01000008.1| 42260 41424 -2 - 837 hypothetical protein - none -
fig|6666666.65894.peg.634 CDS gi|522808899|gb|ATVF01000008.1| 43478 42765 -2 - 714 FIG00544520: hypothetical protein - none -
fig|6666666.65894.peg.635 CDS gi|522808899|gb|ATVF01000008.1| 46475 43482 -2 - 2994 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65894.peg.636 CDS gi|522808899|gb|ATVF01000008.1| 47228 47025 -2 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65894.peg.637 CDS gi|522808899|gb|ATVF01000008.1| 47505 49922 3 + 2418 FIG00545284: hypothetical protein - none -
fig|6666666.65894.peg.638 CDS gi|522808899|gb|ATVF01000008.1| 50268 49930 -3 - 339 FIG00545374: hypothetical protein - none -
fig|6666666.65894.peg.639 CDS gi|522808899|gb|ATVF01000008.1| 50575 50243 -1 - 333 Putative secreted protein - none -
fig|6666666.65894.peg.640 CDS gi|522808899|gb|ATVF01000008.1| 50795 50595 -2 - 201 FIG043778: hypothetical protein CBSS-336982.3.peg.3874
fig|6666666.65894.peg.641 CDS gi|522808899|gb|ATVF01000008.1| 51388 50819 -1 - 570 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.65894.peg.642 CDS gi|522808899|gb|ATVF01000008.1| 52053 51385 -3 - 669 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.65894.peg.643 CDS gi|522808899|gb|ATVF01000008.1| 53303 52161 -2 - 1143 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.65894.peg.644 CDS gi|522808899|gb|ATVF01000008.1| 54360 53296 -3 - 1065 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.65894.peg.645 CDS gi|522808899|gb|ATVF01000008.1| 54817 55683 1 + 867 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65894.peg.646 CDS gi|522808899|gb|ATVF01000008.1| 55902 56450 3 + 549 FIG00544230: hypothetical protein - none -
fig|6666666.65894.peg.647 CDS gi|522808899|gb|ATVF01000008.1| 56530 57531 1 + 1002 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.65894.peg.648 CDS gi|522808899|gb|ATVF01000008.1| 58738 57635 -1 - 1104 putative serine protease - none -
fig|6666666.65894.peg.649 CDS gi|522808899|gb|ATVF01000008.1| 59651 58908 -2 - 744 FIG01193531: hypothetical protein - none -
fig|6666666.65894.peg.650 CDS gi|522808899|gb|ATVF01000008.1| 60223 59651 -1 - 573 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.65894.peg.651 CDS gi|522808899|gb|ATVF01000008.1| 61009 60224 -1 - 786 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65894.peg.652 CDS gi|522808899|gb|ATVF01000008.1| 61072 61254 1 + 183 hypothetical protein - none -
fig|6666666.65894.peg.653 CDS gi|522808899|gb|ATVF01000008.1| 61510 62193 1 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65894.peg.654 CDS gi|522808899|gb|ATVF01000008.1| 63183 62359 -3 - 825 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65894.peg.655 CDS gi|522808899|gb|ATVF01000008.1| 63799 63338 -1 - 462 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65894.peg.656 CDS gi|522808899|gb|ATVF01000008.1| 63958 63803 -1 - 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65894.peg.657 CDS gi|522808899|gb|ATVF01000008.1| 64426 64079 -1 - 348 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65894.peg.658 CDS gi|522808899|gb|ATVF01000008.1| 64732 67122 1 + 2391 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65894.peg.659 CDS gi|522808899|gb|ATVF01000008.1| 67580 67119 -2 - 462 Transamidase GatB domain protein - none -
fig|6666666.65894.peg.660 CDS gi|522808899|gb|ATVF01000008.1| 67608 68516 3 + 909 putative secreted protein - none -
fig|6666666.65894.peg.661 CDS gi|522808899|gb|ATVF01000008.1| 69337 68720 -1 - 618 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65894.peg.662 CDS gi|522808899|gb|ATVF01000008.1| 69542 69961 2 + 420 hypothetical protein - none -
fig|6666666.65894.peg.663 CDS gi|522808899|gb|ATVF01000008.1| 69968 71461 2 + 1494 putative sensor kinase - none -
fig|6666666.65894.peg.664 CDS gi|522808899|gb|ATVF01000008.1| 71458 72120 1 + 663 two-component system, response regulator - none -
fig|6666666.65894.peg.665 CDS gi|522808899|gb|ATVF01000008.1| 73562 72117 -2 - 1446 FIG00544507: hypothetical protein - none -
fig|6666666.65894.peg.666 CDS gi|522808899|gb|ATVF01000008.1| 73753 76650 1 + 2898 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65894.peg.667 CDS gi|522808899|gb|ATVF01000008.1| 76647 77054 3 + 408 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65894.peg.668 CDS gi|522808899|gb|ATVF01000008.1| 77055 78587 3 + 1533 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65894.peg.669 CDS gi|522808899|gb|ATVF01000008.1| 78587 79042 2 + 456 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65894.peg.670 CDS gi|522808899|gb|ATVF01000008.1| 79043 79315 2 + 273 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65894.peg.671 CDS gi|522808899|gb|ATVF01000008.1| 79316 79633 2 + 318 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65894.peg.672 CDS gi|522808899|gb|ATVF01000008.1| 80315 79689 -2 - 627 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65894.peg.673 CDS gi|522808899|gb|ATVF01000008.1| 80759 80340 -2 - 420 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65894.peg.674 CDS gi|522808899|gb|ATVF01000008.1| 81794 80790 -2 - 1005 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65894.peg.675 CDS gi|522808899|gb|ATVF01000008.1| 81963 82310 3 + 348 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.65894.peg.676 CDS gi|522808899|gb|ATVF01000008.1| 84076 82523 -1 - 1554 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65894.peg.677 CDS gi|522808899|gb|ATVF01000008.1| 84279 84857 3 + 579 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65894.peg.678 CDS gi|522808899|gb|ATVF01000008.1| 85932 84901 -3 - 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65894.peg.679 CDS gi|522808899|gb|ATVF01000008.1| 87228 85963 -3 - 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65894.peg.680 CDS gi|522808899|gb|ATVF01000008.1| 87464 88354 2 + 891 FIG00544278: hypothetical protein - none -
fig|6666666.65894.peg.681 CDS gi|522808899|gb|ATVF01000008.1| 88595 90445 2 + 1851 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65894.peg.682 CDS gi|522808899|gb|ATVF01000008.1| 91374 90571 -3 - 804 potential surface-anchored protein - none -
fig|6666666.65894.peg.683 CDS gi|522808899|gb|ATVF01000008.1| 92249 91371 -2 - 879 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65894.peg.684 CDS gi|522808899|gb|ATVF01000008.1| 93268 92288 -1 - 981 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65894.peg.685 CDS gi|522808899|gb|ATVF01000008.1| 94738 93302 -1 - 1437 Fimbrial subunit type 2 precursor - none -
fig|6666666.65894.peg.686 CDS gi|522808899|gb|ATVF01000008.1| 99310 96008 -1 - 3303 hypothetical protein - none -
fig|6666666.65894.peg.687 CDS gi|522808899|gb|ATVF01000008.1| 99885 100997 3 + 1113 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.65894.peg.688 CDS gi|522808899|gb|ATVF01000008.1| 101027 102298 2 + 1272 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65894.peg.689 CDS gi|522808899|gb|ATVF01000008.1| 102298 103053 1 + 756 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65894.peg.690 CDS gi|522808899|gb|ATVF01000008.1| 103777 103121 -1 - 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65894.peg.691 CDS gi|522808899|gb|ATVF01000008.1| 104192 103881 -2 - 312 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65894.peg.692 CDS gi|522808899|gb|ATVF01000008.1| 106526 104280 -2 - 2247 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65894.peg.693 CDS gi|522808899|gb|ATVF01000008.1| 107189 106545 -2 - 645 FIG00544659: hypothetical protein - none -
fig|6666666.65894.peg.694 CDS gi|522808899|gb|ATVF01000008.1| 108470 107190 -2 - 1281 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65894.peg.695 CDS gi|522808899|gb|ATVF01000008.1| 109513 109130 -1 - 384 hypothetical protein - none -
fig|6666666.65894.peg.696 CDS gi|522808899|gb|ATVF01000008.1| 109847 110602 2 + 756 FIG00544944: hypothetical protein - none -
fig|6666666.65894.peg.697 CDS gi|522808899|gb|ATVF01000008.1| 110584 110823 1 + 240 Protocatechuate 3,4-dioxygenase beta subunit - none -
fig|6666666.65894.peg.698 CDS gi|522808899|gb|ATVF01000008.1| 111701 110817 -2 - 885 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.699 CDS gi|522808899|gb|ATVF01000008.1| 113177 111705 -2 - 1473 hypothetical protein - none -
fig|6666666.65894.peg.700 CDS gi|522808899|gb|ATVF01000008.1| 114356 113271 -2 - 1086 hypothetical malic enzyme protein - none -
fig|6666666.65894.peg.701 CDS gi|522808899|gb|ATVF01000008.1| 114503 115222 2 + 720 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.702 CDS gi|522808899|gb|ATVF01000008.1| 116580 115288 -3 - 1293 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.703 CDS gi|522808899|gb|ATVF01000008.1| 118958 116553 -2 - 2406 putative membrane protein - none -
fig|6666666.65894.peg.704 CDS gi|522808899|gb|ATVF01000008.1| 119190 119041 -3 - 150 hypothetical membrane protein - none -
fig|6666666.65894.peg.705 CDS gi|522808899|gb|ATVF01000008.1| 119815 119609 -1 - 207 FIG00546156: hypothetical protein - none -
fig|6666666.65894.peg.706 CDS gi|522808899|gb|ATVF01000008.1| 120394 119915 -1 - 480 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.65894.peg.707 CDS gi|522808899|gb|ATVF01000008.1| 120888 120394 -3 - 495 FIG00544249: hypothetical protein - none -
fig|6666666.65894.peg.708 CDS gi|522808899|gb|ATVF01000008.1| 120926 121948 2 + 1023 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65894.peg.709 CDS gi|522808899|gb|ATVF01000008.1| 122676 123701 3 + 1026 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65894.peg.710 CDS gi|522808899|gb|ATVF01000008.1| 123691 124113 1 + 423 hypothetical protein - none -
fig|6666666.65894.peg.711 CDS gi|522808899|gb|ATVF01000008.1| 124351 124881 1 + 531 hypothetical membrane protein - none -
fig|6666666.65894.peg.712 CDS gi|522808899|gb|ATVF01000008.1| 124907 125878 2 + 972 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65894.peg.713 CDS gi|522808899|gb|ATVF01000008.1| 127050 125875 -3 - 1176 selenocysteine lyase - none -
fig|6666666.65894.peg.714 CDS gi|522808899|gb|ATVF01000008.1| 127189 128085 1 + 897 O-antigen export system permease protein RfbD - none -
fig|6666666.65894.peg.715 CDS gi|522808899|gb|ATVF01000008.1| 128098 128895 1 + 798 O-antigen export system, ATP-binding protein - none -
fig|6666666.65894.peg.716 CDS gi|522808899|gb|ATVF01000008.1| 128948 129880 2 + 933 Putative glycosyl transferase - none -
fig|6666666.65894.peg.717 CDS gi|522808899|gb|ATVF01000008.1| 130273 129869 -1 - 405 FIG00544862: hypothetical protein - none -
fig|6666666.65894.peg.718 CDS gi|522808899|gb|ATVF01000008.1| 130716 130282 -3 - 435 FIG00544442: hypothetical protein - none -
fig|6666666.65894.peg.719 CDS gi|522808899|gb|ATVF01000008.1| 131640 130732 -3 - 909 FIG00545361: hypothetical protein - none -
fig|6666666.65894.peg.720 CDS gi|522808899|gb|ATVF01000008.1| 132220 131747 -1 - 474 FIG00544473: hypothetical protein - none -
fig|6666666.65894.peg.721 CDS gi|522808899|gb|ATVF01000008.1| 132275 132511 2 + 237 FIG00543901: hypothetical protein - none -
fig|6666666.65894.peg.722 CDS gi|522808899|gb|ATVF01000008.1| 132724 134070 1 + 1347 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65894.peg.723 CDS gi|522808899|gb|ATVF01000008.1| 134087 134848 2 + 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.65894.peg.724 CDS gi|522808899|gb|ATVF01000008.1| 134999 137032 2 + 2034 putative membrane protein - none -
fig|6666666.65894.peg.725 CDS gi|522808899|gb|ATVF01000008.1| 137106 140513 3 + 3408 putative arabinosyltransferase - none -
fig|6666666.65894.peg.726 CDS gi|522808899|gb|ATVF01000008.1| 140662 142146 1 + 1485 FIG00544621: hypothetical protein - none -
fig|6666666.65894.peg.727 CDS gi|522808899|gb|ATVF01000008.1| 143798 142278 -2 - 1521 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65894.peg.728 CDS gi|522808899|gb|ATVF01000008.1| 148330 143798 -1 - 4533 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65894.peg.729 CDS gi|522808899|gb|ATVF01000008.1| 149693 148749 -2 - 945 Putative membrane protein - none -
fig|6666666.65894.peg.730 CDS gi|522808899|gb|ATVF01000008.1| 150433 149696 -1 - 738 hypothetical protein - none -
fig|6666666.65894.peg.731 CDS gi|522808899|gb|ATVF01000008.1| 150497 152443 2 + 1947 putative endopeptidase - none -
fig|6666666.65894.peg.732 CDS gi|522808899|gb|ATVF01000008.1| 153573 152944 -3 - 630 No significant database matches - none -
fig|6666666.65894.peg.733 CDS gi|522808899|gb|ATVF01000008.1| 153741 154655 3 + 915 FIG00544069: hypothetical protein - none -
fig|6666666.65894.peg.734 CDS gi|522808899|gb|ATVF01000008.1| 155516 154641 -2 - 876 FIG00546976: hypothetical protein - none -
fig|6666666.65894.peg.735 CDS gi|522808899|gb|ATVF01000008.1| 155904 155593 -3 - 312 hypothetical protein - none -
fig|6666666.65894.peg.736 CDS gi|522808899|gb|ATVF01000008.1| 156772 155918 -1 - 855 lactoylglutathione lyase-like protein - none -
fig|6666666.65894.peg.737 CDS gi|522808899|gb|ATVF01000008.1| 157068 156772 -3 - 297 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65894.peg.738 CDS gi|522808899|gb|ATVF01000008.1| 157765 157103 -1 - 663 L-lysine permease - none -
fig|6666666.65894.peg.739 CDS gi|522808899|gb|ATVF01000008.1| 158459 157779 -2 - 681 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.65894.peg.740 CDS gi|522808899|gb|ATVF01000008.1| 158484 159128 3 + 645 putative acetyltransferase - none -
fig|6666666.65894.peg.741 CDS gi|522808899|gb|ATVF01000008.1| 159231 161573 3 + 2343 ATP-dependent helicase HrpB - none -
fig|6666666.65894.peg.742 CDS gi|522808899|gb|ATVF01000008.1| 162005 161598 -2 - 408 FIG00544309: hypothetical protein - none -
fig|6666666.65894.peg.743 CDS gi|522808899|gb|ATVF01000008.1| 162853 162071 -1 - 783 FIG00545045: hypothetical protein - none -
fig|6666666.65894.peg.744 CDS gi|522808899|gb|ATVF01000008.1| 163002 163556 3 + 555 hypothetical protein - none -
fig|6666666.65894.peg.745 CDS gi|522808899|gb|ATVF01000008.1| 163589 164710 2 + 1122 FIG00545643: hypothetical protein - none -
fig|6666666.65894.peg.746 CDS gi|522808899|gb|ATVF01000008.1| 165590 164787 -2 - 804 probable surface-anchored fimbrial subunit - none -
fig|6666666.65894.peg.747 CDS gi|522808899|gb|ATVF01000008.1| 166242 165550 -3 - 693 Fimbrial subunit type 2 precursor - none -
fig|6666666.65894.peg.748 CDS gi|522808899|gb|ATVF01000008.1| 168700 167036 -1 - 1665 FIG00545896: hypothetical protein - none -
fig|6666666.65894.peg.749 CDS gi|522808899|gb|ATVF01000008.1| 168803 168690 -2 - 114 hypothetical protein - none -
fig|6666666.65894.peg.750 CDS gi|522808899|gb|ATVF01000008.1| 168924 169334 3 + 411 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65894.peg.751 CDS gi|522808899|gb|ATVF01000008.1| 170104 169382 -1 - 723 FIG00544989: hypothetical protein - none -
fig|6666666.65894.peg.752 CDS gi|522808899|gb|ATVF01000008.1| 170208 171119 3 + 912 FIG00548151: hypothetical protein - none -
fig|6666666.65894.peg.753 CDS gi|522808899|gb|ATVF01000008.1| 171919 171167 -1 - 753 FIG00545943: hypothetical protein - none -
fig|6666666.65894.peg.754 CDS gi|522808899|gb|ATVF01000008.1| 173050 171983 -1 - 1068 FIG00544031: hypothetical protein - none -
fig|6666666.65894.peg.755 CDS gi|522808899|gb|ATVF01000008.1| 173532 173092 -3 - 441 hypothetical membrane protein - none -
fig|6666666.65894.peg.756 CDS gi|522808899|gb|ATVF01000008.1| 173824 173696 -1 - 129 hypothetical protein - none -
fig|6666666.65894.peg.757 CDS gi|522808899|gb|ATVF01000008.1| 173824 174873 1 + 1050 hypothetical protein - none -
fig|6666666.65894.peg.758 CDS gi|522808899|gb|ATVF01000008.1| 174890 176185 2 + 1296 permease of the major facilitator superfamily - none -
fig|6666666.65894.peg.759 CDS gi|522808899|gb|ATVF01000008.1| 176430 177521 3 + 1092 FIG00546074: hypothetical protein - none -
fig|6666666.65894.peg.760 CDS gi|522808899|gb|ATVF01000008.1| 178071 177514 -3 - 558 carbonic anhydrase, family 3 - none -
fig|6666666.65894.peg.761 CDS gi|522808899|gb|ATVF01000008.1| 178672 178064 -1 - 609 FIG00546535: hypothetical protein - none -
fig|6666666.65894.peg.762 CDS gi|522808899|gb|ATVF01000008.1| 178869 179783 3 + 915 putative lipase - none -
fig|6666666.65894.peg.763 CDS gi|522808899|gb|ATVF01000008.1| 180358 179771 -1 - 588 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65894.peg.764 CDS gi|522808899|gb|ATVF01000008.1| 180536 181105 2 + 570 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.65894.peg.765 CDS gi|522808899|gb|ATVF01000008.1| 181256 182071 2 + 816 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.65894.peg.766 CDS gi|522808899|gb|ATVF01000008.1| 182072 182899 2 + 828 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65894.peg.767 CDS gi|522808899|gb|ATVF01000008.1| 184262 182883 -2 - 1380 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.65894.peg.768 CDS gi|522808899|gb|ATVF01000008.1| 185113 184262 -1 - 852 FIG00548349: hypothetical protein - none -
fig|6666666.65894.peg.769 CDS gi|522808899|gb|ATVF01000008.1| 185340 186689 3 + 1350 Ribitol/Xylitol/Arabitol transporter, MFS superfamily - none -
fig|6666666.65894.peg.770 CDS gi|522808899|gb|ATVF01000008.1| 187027 188547 1 + 1521 Multiple polyol-specific dehydrogenase (EC 1.1.1.-) - none -
fig|6666666.65894.peg.771 CDS gi|522808899|gb|ATVF01000008.1| 188650 190869 1 + 2220 hypothetical protein - none -
fig|6666666.65894.peg.772 CDS gi|522808899|gb|ATVF01000008.1| 190836 191918 3 + 1083 hypothetical protein - none -
fig|6666666.65894.peg.773 CDS gi|522808899|gb|ATVF01000008.1| 192092 191955 -2 - 138 hypothetical protein - none -
fig|6666666.65894.peg.774 CDS gi|522808899|gb|ATVF01000008.1| 192380 192225 -2 - 156 hypothetical protein - none -
fig|6666666.65894.peg.775 CDS gi|522808899|gb|ATVF01000008.1| 193018 192668 -1 - 351 hypothetical membrane protein - none -
fig|6666666.65894.peg.776 CDS gi|522808899|gb|ATVF01000008.1| 193388 193008 -2 - 381 FIG00544824: hypothetical protein - none -
fig|6666666.65894.peg.777 CDS gi|522808899|gb|ATVF01000008.1| 194930 193548 -2 - 1383 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65894.peg.778 CDS gi|522808899|gb|ATVF01000008.1| 196553 194946 -2 - 1608 FIG00544709: hypothetical protein - none -
fig|6666666.65894.peg.779 CDS gi|522808899|gb|ATVF01000008.1| 200233 196751 -1 - 3483 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.65894.peg.780 CDS gi|522808899|gb|ATVF01000008.1| 200648 201952 2 + 1305 vannilate transporter VanK - none -
fig|6666666.65894.peg.781 CDS gi|522808899|gb|ATVF01000008.1| 202832 201954 -2 - 879 hypothetical protein - none -
fig|6666666.65894.peg.782 CDS gi|522808899|gb|ATVF01000008.1| 203462 202932 -2 - 531 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.65894.peg.783 CDS gi|522808899|gb|ATVF01000008.1| 203784 203434 -3 - 351 NADH-dependent flavin oxidoreductase - none -
fig|6666666.65894.peg.784 CDS gi|522808899|gb|ATVF01000008.1| 204209 203811 -2 - 399 probable bifunctional hydroxylase/oxidoreductase - none -
fig|6666666.65894.peg.785 CDS gi|522808899|gb|ATVF01000008.1| 205140 204328 -3 - 813 Phenylacetic acid degradation operon negative regulatory protein paaX - none -
fig|6666666.65894.peg.786 CDS gi|522808899|gb|ATVF01000008.1| 205492 206220 1 + 729 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65894.peg.787 CDS gi|522808899|gb|ATVF01000008.1| 206334 206215 -3 - 120 hypothetical protein - none -
fig|6666666.65894.peg.788 CDS gi|522808899|gb|ATVF01000008.1| 206326 207738 1 + 1413 Mobile element protein - none -
fig|6666666.65894.peg.789 CDS gi|522808899|gb|ATVF01000008.1| 207937 208362 1 + 426 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65894.peg.790 CDS gi|522808899|gb|ATVF01000008.1| 210040 208574 -1 - 1467 Probable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-) - none -
fig|6666666.65894.peg.791 CDS gi|522808899|gb|ATVF01000008.1| 211742 210294 -2 - 1449 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.65894.peg.792 CDS gi|522808899|gb|ATVF01000008.1| 211829 212338 2 + 510 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.793 CDS gi|522808899|gb|ATVF01000008.1| 212443 213324 1 + 882 FIG00547661: hypothetical protein - none -
fig|6666666.65894.peg.794 CDS gi|522808899|gb|ATVF01000008.1| 213343 214338 1 + 996 FIG00543870: hypothetical protein - none -
fig|6666666.65894.peg.795 CDS gi|522808899|gb|ATVF01000008.1| 215291 214335 -2 - 957 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65894.peg.796 CDS gi|522808899|gb|ATVF01000008.1| 215386 215907 1 + 522 FIG00543933: hypothetical protein - none -
fig|6666666.65894.peg.797 CDS gi|522808899|gb|ATVF01000008.1| 215995 216588 1 + 594 hypothetical protein - none -
fig|6666666.65894.peg.798 CDS gi|522808899|gb|ATVF01000008.1| 216698 217945 2 + 1248 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.65894.peg.799 CDS gi|522808899|gb|ATVF01000008.1| 218098 219579 1 + 1482 permease - none -
fig|6666666.65894.peg.800 CDS gi|522808900|gb|ATVF01000007.1| 223 1080 1 + 858 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.65894.peg.801 CDS gi|522808900|gb|ATVF01000007.1| 1197 1952 3 + 756 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65894.peg.802 CDS gi|522808900|gb|ATVF01000007.1| 2107 3123 1 + 1017 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65894.peg.803 CDS gi|522808900|gb|ATVF01000007.1| 3354 3166 -3 - 189 hypothetical protein - none -
fig|6666666.65894.peg.804 CDS gi|522808900|gb|ATVF01000007.1| 3394 4068 1 + 675 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65894.peg.805 CDS gi|522808900|gb|ATVF01000007.1| 4235 5854 2 + 1620 putative transport protein - none -
fig|6666666.65894.peg.806 CDS gi|522808900|gb|ATVF01000007.1| 6443 5913 -2 - 531 FIG00543905: hypothetical protein - none -
fig|6666666.65894.peg.807 CDS gi|522808900|gb|ATVF01000007.1| 6714 8147 3 + 1434 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.808 CDS gi|522808900|gb|ATVF01000007.1| 8473 8342 -1 - 132 hypothetical protein - none -
fig|6666666.65894.peg.809 CDS gi|522808900|gb|ATVF01000007.1| 8763 9461 3 + 699 hypothetical protein - none -
fig|6666666.65894.peg.810 CDS gi|522808900|gb|ATVF01000007.1| 10147 9527 -1 - 621 secreted hydrolase - none -
fig|6666666.65894.peg.811 CDS gi|522808900|gb|ATVF01000007.1| 10565 10398 -2 - 168 FIG00545761: hypothetical protein - none -
fig|6666666.65894.peg.812 CDS gi|522808900|gb|ATVF01000007.1| 11405 10872 -2 - 534 FIG00544729: hypothetical protein - none -
fig|6666666.65894.peg.813 CDS gi|522808900|gb|ATVF01000007.1| 12968 11523 -2 - 1446 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65894.peg.814 CDS gi|522808900|gb|ATVF01000007.1| 13113 13361 3 + 249 hypothetical protein - none -
fig|6666666.65894.peg.815 CDS gi|522808900|gb|ATVF01000007.1| 13450 14799 1 + 1350 FIG00545265: hypothetical protein - none -
fig|6666666.65894.peg.816 CDS gi|522808900|gb|ATVF01000007.1| 15322 14861 -1 - 462 FIG01270316: hypothetical protein - none -
fig|6666666.65894.peg.817 CDS gi|522808900|gb|ATVF01000007.1| 16143 15481 -3 - 663 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65894.peg.818 CDS gi|522808900|gb|ATVF01000007.1| 19407 16270 -3 - 3138 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.65894.peg.819 CDS gi|522808900|gb|ATVF01000007.1| 20777 19437 -2 - 1341 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.820 CDS gi|522808900|gb|ATVF01000007.1| 20976 22010 3 + 1035 hypothetical protein - none -
fig|6666666.65894.peg.821 CDS gi|522808900|gb|ATVF01000007.1| 22225 24033 1 + 1809 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65894.peg.822 CDS gi|522808900|gb|ATVF01000007.1| 24329 24126 -2 - 204 hypothetical protein - none -
fig|6666666.65894.peg.823 CDS gi|522808900|gb|ATVF01000007.1| 24470 25774 2 + 1305 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.65894.peg.824 CDS gi|522808900|gb|ATVF01000007.1| 27239 25812 -2 - 1428 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65894.peg.825 CDS gi|522808900|gb|ATVF01000007.1| 28957 27773 -1 - 1185 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.65894.peg.826 CDS gi|522808900|gb|ATVF01000007.1| 29700 28981 -3 - 720 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.65894.peg.827 CDS gi|522808900|gb|ATVF01000007.1| 30879 29722 -3 - 1158 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.65894.peg.828 CDS gi|522808900|gb|ATVF01000007.1| 30979 31635 1 + 657 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.65894.peg.829 CDS gi|522808900|gb|ATVF01000007.1| 31622 32122 2 + 501 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.65894.peg.830 CDS gi|522808900|gb|ATVF01000007.1| 32156 33202 2 + 1047 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65894.peg.831 CDS gi|522808900|gb|ATVF01000007.1| 33255 33374 3 + 120 hypothetical protein - none -
fig|6666666.65894.peg.832 CDS gi|522808900|gb|ATVF01000007.1| 33987 33556 -3 - 432 FIG00544601: hypothetical protein - none -
fig|6666666.65894.peg.833 CDS gi|522808900|gb|ATVF01000007.1| 34452 34309 -3 - 144 hypothetical protein - none -
fig|6666666.65894.peg.834 CDS gi|522808900|gb|ATVF01000007.1| 34698 37466 3 + 2769 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.835 CDS gi|522808900|gb|ATVF01000007.1| 38366 37575 -2 - 792 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.836 CDS gi|522808900|gb|ATVF01000007.1| 39260 38373 -2 - 888 ABC-type transporter, permease component - none -
fig|6666666.65894.peg.837 CDS gi|522808900|gb|ATVF01000007.1| 40249 39257 -1 - 993 ABC transporter substrate-binding protein - none -
fig|6666666.65894.peg.838 CDS gi|522808900|gb|ATVF01000007.1| 40519 41280 1 + 762 FIG00547038: hypothetical protein - none -
fig|6666666.65894.peg.839 CDS gi|522808900|gb|ATVF01000007.1| 42308 41277 -2 - 1032 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.65894.peg.840 CDS gi|522808900|gb|ATVF01000007.1| 42366 42740 3 + 375 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.841 CDS gi|522808900|gb|ATVF01000007.1| 42828 42715 -3 - 114 hypothetical protein - none -
fig|6666666.65894.peg.842 CDS gi|522808900|gb|ATVF01000007.1| 42866 43690 2 + 825 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.65894.peg.843 CDS gi|522808900|gb|ATVF01000007.1| 43732 44778 1 + 1047 FIG00545003: hypothetical protein - none -
fig|6666666.65894.peg.844 CDS gi|522808900|gb|ATVF01000007.1| 45726 44785 -3 - 942 putative oxidoreductase - none -
fig|6666666.65894.peg.845 CDS gi|522808900|gb|ATVF01000007.1| 46249 45899 -1 - 351 FIG00547381: hypothetical protein - none -
fig|6666666.65894.peg.846 CDS gi|522808900|gb|ATVF01000007.1| 47448 46639 -3 - 810 beta-lactamase class C - none -
fig|6666666.65894.peg.847 CDS gi|522808900|gb|ATVF01000007.1| 47876 49453 2 + 1578 putative secreted alkaline phosphatase - none -
fig|6666666.65894.peg.848 CDS gi|522808900|gb|ATVF01000007.1| 49856 51781 2 + 1926 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65894.peg.849 CDS gi|522808900|gb|ATVF01000007.1| 51835 52077 1 + 243 FIG00549194: hypothetical protein - none -
fig|6666666.65894.peg.850 CDS gi|522808900|gb|ATVF01000007.1| 53975 52074 -2 - 1902 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65894.peg.851 CDS gi|522808900|gb|ATVF01000007.1| 54015 54521 3 + 507 putative ribonuclease - none -
fig|6666666.65894.peg.852 CDS gi|522808900|gb|ATVF01000007.1| 54522 54764 3 + 243 FIG00546281: hypothetical protein - none -
fig|6666666.65894.peg.853 CDS gi|522808900|gb|ATVF01000007.1| 56705 54834 -2 - 1872 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65894.peg.854 CDS gi|522808900|gb|ATVF01000007.1| 57399 56884 -3 - 516 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) - none -
fig|6666666.65894.peg.855 CDS gi|522808900|gb|ATVF01000007.1| 59049 57769 -3 - 1281 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65894.peg.856 CDS gi|522808900|gb|ATVF01000007.1| 59727 59050 -3 - 678 Putative secreted protein - none -
fig|6666666.65894.peg.857 CDS gi|522808900|gb|ATVF01000007.1| 59750 61804 2 + 2055 FIG00543878: hypothetical protein - none -
fig|6666666.65894.peg.858 CDS gi|522808900|gb|ATVF01000007.1| 62305 61808 -1 - 498 FIG00545596: hypothetical protein - none -
fig|6666666.65894.peg.859 CDS gi|522808900|gb|ATVF01000007.1| 62874 62323 -3 - 552 FIG00544046: hypothetical protein - none -
fig|6666666.65894.peg.860 CDS gi|522808900|gb|ATVF01000007.1| 64348 62963 -1 - 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65894.peg.861 CDS gi|522808900|gb|ATVF01000007.1| 64735 65121 1 + 387 putative transcription regulator - none -
fig|6666666.65894.peg.862 CDS gi|522808900|gb|ATVF01000007.1| 65161 65574 1 + 414 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.65894.peg.863 CDS gi|522808900|gb|ATVF01000007.1| 66644 65571 -2 - 1074 FIG00544679: hypothetical protein - none -
fig|6666666.65894.peg.864 CDS gi|522808900|gb|ATVF01000007.1| 67396 66647 -1 - 750 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65894.peg.865 CDS gi|522808900|gb|ATVF01000007.1| 68134 67406 -1 - 729 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65894.peg.866 CDS gi|522808900|gb|ATVF01000007.1| 69071 68154 -2 - 918 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65894.peg.867 CDS gi|522808900|gb|ATVF01000007.1| 70558 69236 -1 - 1323 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65894.peg.868 CDS gi|522808900|gb|ATVF01000007.1| 71161 70559 -1 - 603 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65894.peg.869 CDS gi|522808900|gb|ATVF01000007.1| 72210 71161 -3 - 1050 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.65894.peg.870 CDS gi|522808900|gb|ATVF01000007.1| 72984 72259 -3 - 726 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.65894.peg.871 CDS gi|522808900|gb|ATVF01000007.1| 74126 72984 -2 - 1143 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65894.peg.872 CDS gi|522808900|gb|ATVF01000007.1| 75242 74214 -2 - 1029 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65894.peg.873 CDS gi|522808900|gb|ATVF01000007.1| 76415 75273 -2 - 1143 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65894.peg.874 CDS gi|522808900|gb|ATVF01000007.1| 76574 77029 2 + 456 hypothetical protein - none -
fig|6666666.65894.peg.875 CDS gi|522808900|gb|ATVF01000007.1| 77740 77048 -1 - 693 FIG00543880: hypothetical protein - none -
fig|6666666.65894.peg.876 CDS gi|522808900|gb|ATVF01000007.1| 78367 78014 -1 - 354 FIG00545489: hypothetical protein - none -
fig|6666666.65894.peg.877 CDS gi|522808900|gb|ATVF01000007.1| 80226 78379 -3 - 1848 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.65894.peg.878 CDS gi|522808900|gb|ATVF01000007.1| 80549 82696 2 + 2148 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65894.peg.879 CDS gi|522808900|gb|ATVF01000007.1| 82862 84727 2 + 1866 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.880 CDS gi|522808900|gb|ATVF01000007.1| 84926 84786 -2 - 141 FIG00545202: hypothetical protein - none -
fig|6666666.65894.peg.881 CDS gi|522808900|gb|ATVF01000007.1| 85142 84933 -2 - 210 putative secreted or membrane protein - none -
fig|6666666.65894.peg.882 CDS gi|522808900|gb|ATVF01000007.1| 87204 85168 -3 - 2037 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.65894.peg.883 CDS gi|522808900|gb|ATVF01000007.1| 87237 88415 3 + 1179 FIG00547479: hypothetical protein - none -
fig|6666666.65894.peg.884 CDS gi|522808900|gb|ATVF01000007.1| 88472 90277 2 + 1806 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.65894.peg.885 CDS gi|522808900|gb|ATVF01000007.1| 90281 91378 2 + 1098 uncharacterized protein probably involved in trehalose biosynthesis - none -
fig|6666666.65894.peg.886 CDS gi|522808900|gb|ATVF01000007.1| 91948 91382 -1 - 567 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.65894.peg.887 CDS gi|522808900|gb|ATVF01000007.1| 93640 91976 -1 - 1665 FIG00546957: hypothetical protein - none -
fig|6666666.65894.peg.888 CDS gi|522808900|gb|ATVF01000007.1| 94831 94307 -1 - 525 FIG00545146: hypothetical protein - none -
fig|6666666.65894.peg.889 CDS gi|522808900|gb|ATVF01000007.1| 94885 95991 1 + 1107 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.65894.peg.890 CDS gi|522808900|gb|ATVF01000007.1| 95992 97281 1 + 1290 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65894.peg.891 CDS gi|522808900|gb|ATVF01000007.1| 97293 98273 3 + 981 FIG00546307: hypothetical protein - none -
fig|6666666.65894.peg.892 CDS gi|522808900|gb|ATVF01000007.1| 98822 98304 -2 - 519 hypothetical membrane protein - none -
fig|6666666.65894.peg.893 CDS gi|522808900|gb|ATVF01000007.1| 99838 98834 -1 - 1005 Auxin Efflux Carrier - none -
fig|6666666.65894.peg.894 CDS gi|522808900|gb|ATVF01000007.1| 99876 101378 3 + 1503 putative ABC transporter substrate-binding protein - none -
fig|6666666.65894.peg.895 CDS gi|522808900|gb|ATVF01000007.1| 101375 102316 2 + 942 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65894.peg.896 CDS gi|522808900|gb|ATVF01000007.1| 102330 103157 3 + 828 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65894.peg.897 CDS gi|522808900|gb|ATVF01000007.1| 103150 104583 1 + 1434 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.898 CDS gi|522808900|gb|ATVF01000007.1| 105131 104580 -2 - 552 2@1-5@1 RNA ligase RNA processing orphans
fig|6666666.65894.peg.899 CDS gi|522808900|gb|ATVF01000007.1| 105275 105162 -2 - 114 hypothetical protein - none -
fig|6666666.65894.peg.900 CDS gi|522808900|gb|ATVF01000007.1| 105626 106387 2 + 762 FIG00546833: hypothetical protein - none -
fig|6666666.65894.peg.901 CDS gi|522808900|gb|ATVF01000007.1| 108597 106384 -3 - 2214 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.65894.peg.902 CDS gi|522808900|gb|ATVF01000007.1| 109094 110392 2 + 1299 Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30) Glyoxylate bypass;
Glyoxylate bypass cluster;
Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65894.peg.903 CDS gi|522808900|gb|ATVF01000007.1| 110712 112517 3 + 1806 FIG00548821: hypothetical protein - none -
fig|6666666.65894.peg.904 CDS gi|522808900|gb|ATVF01000007.1| 113107 114972 1 + 1866 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65894.peg.905 CDS gi|522808900|gb|ATVF01000007.1| 115301 115029 -2 - 273 FIG00545616: hypothetical protein - none -
fig|6666666.65894.peg.906 CDS gi|522808900|gb|ATVF01000007.1| 115730 116728 2 + 999 FIG00545079: hypothetical protein - none -
fig|6666666.65894.peg.907 CDS gi|522808900|gb|ATVF01000007.1| 116826 118439 3 + 1614 FIG00545027: hypothetical protein - none -
fig|6666666.65894.peg.908 CDS gi|522808900|gb|ATVF01000007.1| 118546 118929 1 + 384 hypothetical protein - none -
fig|6666666.65894.peg.909 CDS gi|522808900|gb|ATVF01000007.1| 119237 120121 2 + 885 hypothetical protein - none -
fig|6666666.65894.peg.910 CDS gi|522808900|gb|ATVF01000007.1| 122032 120185 -1 - 1848 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65894.peg.911 CDS gi|522808900|gb|ATVF01000007.1| 122271 122873 3 + 603 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65894.peg.912 CDS gi|522808900|gb|ATVF01000007.1| 123071 123334 2 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.65894.peg.913 CDS gi|522808900|gb|ATVF01000007.1| 124059 123388 -3 - 672 L-lysine permease - none -
fig|6666666.65894.peg.914 CDS gi|522808900|gb|ATVF01000007.1| 124465 124064 -1 - 402 ankyrin repeat containing protein - none -
fig|6666666.65894.peg.915 CDS gi|522808900|gb|ATVF01000007.1| 125497 124520 -1 - 978 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65894.peg.916 CDS gi|522808900|gb|ATVF01000007.1| 127175 125523 -2 - 1653 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.65894.peg.917 CDS gi|522808900|gb|ATVF01000007.1| 127855 127172 -1 - 684 FIG00545717: hypothetical protein - none -
fig|6666666.65894.peg.918 CDS gi|522808900|gb|ATVF01000007.1| 128756 127932 -2 - 825 Hypothetical protein DUF194, DegV family - none -
fig|6666666.65894.peg.919 CDS gi|522808900|gb|ATVF01000007.1| 129497 128787 -2 - 711 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.65894.peg.920 CDS gi|522808900|gb|ATVF01000007.1| 130041 129511 -3 - 531 Iojap protein - none -
fig|6666666.65894.peg.921 CDS gi|522808900|gb|ATVF01000007.1| 130870 130163 -1 - 708 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65894.peg.922 CDS gi|522808900|gb|ATVF01000007.1| 131865 130879 -3 - 987 FIG00544655: hypothetical protein - none -
fig|6666666.65894.peg.923 CDS gi|522808900|gb|ATVF01000007.1| 132504 131926 -3 - 579 hypothetical protein - none -
fig|6666666.65894.peg.924 CDS gi|522808900|gb|ATVF01000007.1| 132911 132522 -2 - 390 hypothetical protein - none -
fig|6666666.65894.peg.925 CDS gi|522808900|gb|ATVF01000007.1| 134399 133005 -2 - 1395 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65894.peg.926 CDS gi|522808900|gb|ATVF01000007.1| 135332 134418 -2 - 915 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65894.peg.927 CDS gi|522808900|gb|ATVF01000007.1| 136626 135397 -3 - 1230 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.65894.peg.928 CDS gi|522808900|gb|ATVF01000007.1| 138244 136736 -1 - 1509 COG0536: GTP-binding protein Obg - none -
fig|6666666.65894.peg.929 CDS gi|522808900|gb|ATVF01000007.1| 138474 140408 3 + 1935 xanthine/uracil permease - none -
fig|6666666.65894.peg.930 CDS gi|522808900|gb|ATVF01000007.1| 141389 140472 -2 - 918 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65894.peg.931 CDS gi|522808900|gb|ATVF01000007.1| 141454 142110 1 + 657 FIG00543952: hypothetical protein - none -
fig|6666666.65894.peg.932 CDS gi|522808900|gb|ATVF01000007.1| 142454 142188 -2 - 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65894.peg.933 CDS gi|522808900|gb|ATVF01000007.1| 142809 142504 -3 - 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65894.peg.934 CDS gi|522808900|gb|ATVF01000007.1| 146059 143036 -1 - 3024 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.65894.peg.935 CDS gi|522808900|gb|ATVF01000007.1| 146265 146966 3 + 702 hypothetical membrane protein - none -
fig|6666666.65894.peg.936 CDS gi|522808900|gb|ATVF01000007.1| 147009 148052 3 + 1044 FIG00547141: hypothetical protein - none -
fig|6666666.65894.peg.937 CDS gi|522808900|gb|ATVF01000007.1| 148110 148505 3 + 396 FIG00548167: hypothetical protein - none -
fig|6666666.65894.peg.938 CDS gi|522808900|gb|ATVF01000007.1| 148968 148558 -3 - 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.65894.peg.939 CDS gi|522808900|gb|ATVF01000007.1| 149388 149017 -3 - 372 FIG00547627: hypothetical protein - none -
fig|6666666.65894.peg.940 CDS gi|522808900|gb|ATVF01000007.1| 149387 149728 2 + 342 hypothetical protein - none -
fig|6666666.65894.peg.941 CDS gi|522808900|gb|ATVF01000007.1| 150210 149785 -3 - 426 Possible membrane protein - none -
fig|6666666.65894.peg.942 CDS gi|522808900|gb|ATVF01000007.1| 151709 150207 -2 - 1503 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65894.peg.943 CDS gi|522808900|gb|ATVF01000007.1| 154420 151709 -1 - 2712 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65894.peg.944 CDS gi|522808900|gb|ATVF01000007.1| 156065 154488 -2 - 1578 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.65894.peg.945 CDS gi|522808900|gb|ATVF01000007.1| 156264 157718 3 + 1455 FIG00543888: hypothetical protein - none -
fig|6666666.65894.peg.946 CDS gi|522808900|gb|ATVF01000007.1| 158302 157715 -1 - 588 Lysine decarboxylase family - none -
fig|6666666.65894.peg.947 CDS gi|522808900|gb|ATVF01000007.1| 159283 158312 -1 - 972 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
TCA Cycle
fig|6666666.65894.peg.948 CDS gi|522808900|gb|ATVF01000007.1| 159674 160447 2 + 774 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.949 CDS gi|522808900|gb|ATVF01000007.1| 161401 160469 -1 - 933 Auxin Efflux Carrier - none -
fig|6666666.65894.peg.950 CDS gi|522808900|gb|ATVF01000007.1| 162685 161402 -1 - 1284 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65894.peg.951 CDS gi|522808900|gb|ATVF01000007.1| 162956 163939 2 + 984 FIG00547076: hypothetical protein - none -
fig|6666666.65894.peg.952 CDS gi|522808900|gb|ATVF01000007.1| 164574 163936 -3 - 639 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.953 CDS gi|522808900|gb|ATVF01000007.1| 165317 164574 -2 - 744 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.954 CDS gi|522808900|gb|ATVF01000007.1| 165388 166155 1 + 768 Pca regulon regulatory protein PcaR Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.955 CDS gi|522808900|gb|ATVF01000007.1| 166179 167411 3 + 1233 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) - none -
fig|6666666.65894.peg.956 CDS gi|522808900|gb|ATVF01000007.1| 167415 168167 3 + 753 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.957 CDS gi|522808900|gb|ATVF01000007.1| 168178 170268 1 + 2091 DNA-binding HTH domain-containing protein - none -
fig|6666666.65894.peg.958 CDS gi|522808900|gb|ATVF01000007.1| 170628 170257 -3 - 372 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.959 CDS gi|522808900|gb|ATVF01000007.1| 171659 170628 -2 - 1032 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.960 CDS gi|522808900|gb|ATVF01000007.1| 172321 171707 -1 - 615 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.961 CDS gi|522808900|gb|ATVF01000007.1| 173025 172333 -3 - 693 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.962 CDS gi|522808900|gb|ATVF01000007.1| 174344 173184 -2 - 1161 FIG00547611: hypothetical protein - none -
fig|6666666.65894.peg.963 CDS gi|522808900|gb|ATVF01000007.1| 174798 174505 -3 - 294 Muconolactone isomerase (EC 5.3.3.4) Catechol branch of beta-ketoadipate pathway
fig|6666666.65894.peg.964 CDS gi|522808900|gb|ATVF01000007.1| 175936 174815 -1 - 1122 Muconate cycloisomerase (EC 5.5.1.1) Catechol branch of beta-ketoadipate pathway;
Muconate lactonizing enzyme family
fig|6666666.65894.peg.965 CDS gi|522808900|gb|ATVF01000007.1| 176878 176021 -1 - 858 Catechol 1,2-dioxygenase (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.65894.peg.966 CDS gi|522808900|gb|ATVF01000007.1| 177118 177002 -1 - 117 hypothetical protein - none -
fig|6666666.65894.peg.967 CDS gi|522808900|gb|ATVF01000007.1| 177342 178835 3 + 1494 Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65894.peg.968 CDS gi|522808900|gb|ATVF01000007.1| 178870 179376 1 + 507 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65894.peg.969 CDS gi|522808900|gb|ATVF01000007.1| 179388 180926 3 + 1539 benzoate dioxygenase, ferredoxin reductase component - none -
fig|6666666.65894.peg.970 CDS gi|522808900|gb|ATVF01000007.1| 180923 181753 2 + 831 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) Benzoate degradation
fig|6666666.65894.peg.971 CDS gi|522808900|gb|ATVF01000007.1| 181826 184519 2 + 2694 probable transcriptional regulator - none -
fig|6666666.65894.peg.972 CDS gi|522808900|gb|ATVF01000007.1| 184666 186015 1 + 1350 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65894.peg.973 CDS gi|522808900|gb|ATVF01000007.1| 186092 187318 2 + 1227 Benzoate transport protein Benzoate degradation
fig|6666666.65894.peg.974 CDS gi|522808900|gb|ATVF01000007.1| 188008 187382 -1 - 627 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65894.peg.975 CDS gi|522808900|gb|ATVF01000007.1| 188636 188043 -2 - 594 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65894.peg.976 CDS gi|522808900|gb|ATVF01000007.1| 190170 188827 -3 - 1344 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65894.peg.977 CDS gi|522808900|gb|ATVF01000007.1| 191541 191807 3 + 267 FIG00544802: hypothetical protein - none -
fig|6666666.65894.peg.978 CDS gi|522808900|gb|ATVF01000007.1| 191981 192820 2 + 840 FIG00997919: hypothetical protein - none -
fig|6666666.65894.peg.979 CDS gi|522808900|gb|ATVF01000007.1| 193357 192884 -1 - 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65894.peg.980 CDS gi|522808900|gb|ATVF01000007.1| 193776 193432 -3 - 345 hypothetical protein - none -
fig|6666666.65894.peg.981 CDS gi|522808900|gb|ATVF01000007.1| 194156 193785 -2 - 372 hypothetical protein - none -
fig|6666666.65894.peg.982 CDS gi|522808900|gb|ATVF01000007.1| 194963 194352 -2 - 612 FIG00544229: hypothetical protein - none -
fig|6666666.65894.peg.983 CDS gi|522808900|gb|ATVF01000007.1| 195104 197701 2 + 2598 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65894.peg.984 CDS gi|522808900|gb|ATVF01000007.1| 197851 198936 1 + 1086 conserved hypothetical protein - none -
fig|6666666.65894.peg.985 CDS gi|522808900|gb|ATVF01000007.1| 199136 198933 -2 - 204 Transcriptional regulator, Cro/CI family - none -
fig|6666666.65894.peg.986 CDS gi|522808900|gb|ATVF01000007.1| 199601 199146 -2 - 456 hypothetical protein - none -
fig|6666666.65894.peg.987 CDS gi|522808900|gb|ATVF01000007.1| 200800 199697 -1 - 1104 permease of the major facilitator superfamily - none -
fig|6666666.65894.peg.988 CDS gi|522808900|gb|ATVF01000007.1| 202130 200895 -2 - 1236 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.65894.peg.989 CDS gi|522808900|gb|ATVF01000007.1| 203772 202144 -3 - 1629 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.990 CDS gi|522808900|gb|ATVF01000007.1| 204543 203776 -3 - 768 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65894.peg.991 CDS gi|522808900|gb|ATVF01000007.1| 205607 204666 -2 - 942 putative transport protein - none -
fig|6666666.65894.peg.992 CDS gi|522808900|gb|ATVF01000007.1| 207317 205608 -2 - 1710 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.65894.peg.993 CDS gi|522808900|gb|ATVF01000007.1| 207464 209413 2 + 1950 FIG00544299: hypothetical protein - none -
fig|6666666.65894.peg.994 CDS gi|522808900|gb|ATVF01000007.1| 209581 210261 1 + 681 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65894.peg.995 CDS gi|522808900|gb|ATVF01000007.1| 210992 210264 -2 - 729 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65894.peg.996 CDS gi|522808900|gb|ATVF01000007.1| 211106 211591 2 + 486 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.997 CDS gi|522808900|gb|ATVF01000007.1| 211581 211835 3 + 255 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.998 CDS gi|522808900|gb|ATVF01000007.1| 212998 211838 -1 - 1161 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.65894.peg.999 CDS gi|522808900|gb|ATVF01000007.1| 213181 214218 1 + 1038 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65894.peg.1000 CDS gi|522808900|gb|ATVF01000007.1| 214230 214631 3 + 402 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65894.peg.1001 CDS gi|522808900|gb|ATVF01000007.1| 214658 215788 2 + 1131 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.65894.peg.1002 CDS gi|522808900|gb|ATVF01000007.1| 216414 215785 -3 - 630 FIG00545013: hypothetical protein - none -
fig|6666666.65894.peg.1003 CDS gi|522808900|gb|ATVF01000007.1| 216875 216414 -2 - 462 FIG00544139: hypothetical protein - none -
fig|6666666.65894.peg.1004 CDS gi|522808900|gb|ATVF01000007.1| 218726 217056 -2 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1005 CDS gi|522808900|gb|ATVF01000007.1| 219312 218842 -3 - 471 single-stranded DNA-binding protein - none -
fig|6666666.65894.peg.1006 CDS gi|522808900|gb|ATVF01000007.1| 221687 219564 -2 - 2124 Copper resistance protein D Copper homeostasis
fig|6666666.65894.peg.1007 CDS gi|522808900|gb|ATVF01000007.1| 222529 223386 1 + 858 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1008 CDS gi|522808906|gb|ATVF01000006.1| 723 349 -3 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.65894.peg.1009 CDS gi|522808906|gb|ATVF01000006.1| 926 2434 2 + 1509 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65894.peg.1010 CDS gi|522808906|gb|ATVF01000006.1| 3316 2486 -1 - 831 FIG00544174: hypothetical protein - none -
fig|6666666.65894.peg.1011 CDS gi|522808906|gb|ATVF01000006.1| 3950 3576 -2 - 375 Thioredoxin - none -
fig|6666666.65894.peg.1012 CDS gi|522808906|gb|ATVF01000006.1| 4136 4342 2 + 207 copper chaperone - none -
fig|6666666.65894.peg.1013 CDS gi|522808906|gb|ATVF01000006.1| 4575 5894 3 + 1320 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.65894.peg.1014 CDS gi|522808906|gb|ATVF01000006.1| 6421 5891 -1 - 531 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65894.peg.1015 CDS gi|522808906|gb|ATVF01000006.1| 8165 6618 -2 - 1548 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65894.peg.1016 CDS gi|522808906|gb|ATVF01000006.1| 9204 8752 -3 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65894.peg.1017 CDS gi|522808906|gb|ATVF01000006.1| 9869 9258 -2 - 612 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65894.peg.1018 CDS gi|522808906|gb|ATVF01000006.1| 10193 9906 -2 - 288 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.65894.peg.1019 CDS gi|522808906|gb|ATVF01000006.1| 10486 10319 -1 - 168 hypothetical protein - none -
fig|6666666.65894.peg.1020 CDS gi|522808906|gb|ATVF01000006.1| 10797 10606 -3 - 192 FIG00544411: hypothetical protein - none -
fig|6666666.65894.peg.1021 CDS gi|522808906|gb|ATVF01000006.1| 12251 10794 -2 - 1458 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1022 CDS gi|522808906|gb|ATVF01000006.1| 14523 12328 -3 - 2196 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1023 CDS gi|522808906|gb|ATVF01000006.1| 14977 14615 -1 - 363 FIG00544267: hypothetical protein - none -
fig|6666666.65894.peg.1024 CDS gi|522808906|gb|ATVF01000006.1| 15122 15583 2 + 462 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.1025 CDS gi|522808906|gb|ATVF01000006.1| 15737 16552 2 + 816 Universal stress protein family - none -
fig|6666666.65894.peg.1026 CDS gi|522808906|gb|ATVF01000006.1| 16618 17106 1 + 489 hypothetical membrane protein - none -
fig|6666666.65894.peg.1027 CDS gi|522808906|gb|ATVF01000006.1| 17479 17150 -1 - 330 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.65894.peg.1028 CDS gi|522808906|gb|ATVF01000006.1| 18550 17609 -1 - 942 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65894.peg.1029 CDS gi|522808906|gb|ATVF01000006.1| 18793 19884 1 + 1092 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.65894.peg.1030 CDS gi|522808906|gb|ATVF01000006.1| 21606 20119 -3 - 1488 ATP-dependent Zn protease - none -
fig|6666666.65894.peg.1031 CDS gi|522808906|gb|ATVF01000006.1| 21712 22521 1 + 810 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65894.peg.1032 CDS gi|522808906|gb|ATVF01000006.1| 22607 23224 2 + 618 FIG00548233: hypothetical protein - none -
fig|6666666.65894.peg.1033 CDS gi|522808906|gb|ATVF01000006.1| 23710 23225 -1 - 486 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65894.peg.1034 CDS gi|522808906|gb|ATVF01000006.1| 24728 23715 -2 - 1014 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.65894.peg.1035 CDS gi|522808906|gb|ATVF01000006.1| 24856 25821 1 + 966 ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component - none -
fig|6666666.65894.peg.1036 CDS gi|522808906|gb|ATVF01000006.1| 25943 27115 2 + 1173 FIG00543893: hypothetical protein - none -
fig|6666666.65894.peg.1037 CDS gi|522808906|gb|ATVF01000006.1| 28606 27119 -1 - 1488 sugar kinase - none -
fig|6666666.65894.peg.1038 CDS gi|522808906|gb|ATVF01000006.1| 29299 28646 -1 - 654 Conserved integral membrane protein - none -
fig|6666666.65894.peg.1039 CDS gi|522808906|gb|ATVF01000006.1| 29972 29310 -2 - 663 Conserved integral membrane protein - none -
fig|6666666.65894.peg.1040 CDS gi|522808906|gb|ATVF01000006.1| 30634 29999 -1 - 636 FIG00546992: hypothetical protein - none -
fig|6666666.65894.peg.1041 CDS gi|522808906|gb|ATVF01000006.1| 30753 32063 3 + 1311 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.65894.peg.1042 CDS gi|522808906|gb|ATVF01000006.1| 33296 32064 -2 - 1233 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.65894.peg.1043 CDS gi|522808906|gb|ATVF01000006.1| 33729 33418 -3 - 312 hypothetical protein - none -
fig|6666666.65894.peg.1044 CDS gi|522808906|gb|ATVF01000006.1| 33911 34519 2 + 609 FIG00546334: hypothetical protein - none -
fig|6666666.65894.peg.1045 CDS gi|522808906|gb|ATVF01000006.1| 37441 34583 -1 - 2859 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65894.peg.1046 CDS gi|522808906|gb|ATVF01000006.1| 37873 37502 -1 - 372 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.65894.peg.1047 CDS gi|522808906|gb|ATVF01000006.1| 38857 38123 -1 - 735 Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4) Glutathione analogs: mycothiol
fig|6666666.65894.peg.1048 CDS gi|522808906|gb|ATVF01000006.1| 39697 38858 -1 - 840 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Pterin carbinolamine dehydratase;
Salicylate and gentisate catabolism
fig|6666666.65894.peg.1049 CDS gi|522808906|gb|ATVF01000006.1| 40831 39704 -1 - 1128 Gentisate 1,2-dioxygenase (EC 1.13.11.4) Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65894.peg.1050 CDS gi|522808906|gb|ATVF01000006.1| 41861 41055 -2 - 807 Transcriptional regulator, IclR family - none -
fig|6666666.65894.peg.1051 CDS gi|522808906|gb|ATVF01000006.1| 41911 43257 1 + 1347 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65894.peg.1052 CDS gi|522808906|gb|ATVF01000006.1| 43362 44696 3 + 1335 Putative n-hydroxybenzoate hydroxylase Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65894.peg.1053 CDS gi|522808906|gb|ATVF01000006.1| 44932 44795 -1 - 138 hypothetical protein - none -
fig|6666666.65894.peg.1054 CDS gi|522808906|gb|ATVF01000006.1| 46354 45089 -1 - 1266 putative transmembrane symporter - none -
fig|6666666.65894.peg.1055 CDS gi|522808906|gb|ATVF01000006.1| 46657 47172 1 + 516 Putative integral membrane protein - none -
fig|6666666.65894.peg.1056 CDS gi|522808906|gb|ATVF01000006.1| 48211 47303 -1 - 909 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65894.peg.1057 CDS gi|522808906|gb|ATVF01000006.1| 48931 48224 -1 - 708 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65894.peg.1058 CDS gi|522808906|gb|ATVF01000006.1| 49593 48928 -3 - 666 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65894.peg.1059 CDS gi|522808906|gb|ATVF01000006.1| 50399 49590 -2 - 810 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65894.peg.1060 CDS gi|522808906|gb|ATVF01000006.1| 50819 52375 2 + 1557 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65894.peg.1061 CDS gi|522808906|gb|ATVF01000006.1| 52372 52998 1 + 627 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65894.peg.1062 CDS gi|522808906|gb|ATVF01000006.1| 53035 54075 1 + 1041 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65894.peg.1063 CDS gi|522808906|gb|ATVF01000006.1| 54078 55502 3 + 1425 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65894.peg.1064 CDS gi|522808906|gb|ATVF01000006.1| 55515 56786 3 + 1272 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65894.peg.1065 CDS gi|522808906|gb|ATVF01000006.1| 56786 57628 2 + 843 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65894.peg.1066 CDS gi|522808906|gb|ATVF01000006.1| 59304 57769 -3 - 1536 Putative integral membrane protein - none -
fig|6666666.65894.peg.1067 CDS gi|522808906|gb|ATVF01000006.1| 60136 59339 -1 - 798 Putative phosphotransferase system protein - none -
fig|6666666.65894.peg.1068 CDS gi|522808906|gb|ATVF01000006.1| 60328 61212 1 + 885 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1069 CDS gi|522808906|gb|ATVF01000006.1| 61464 62045 3 + 582 PROBABLE TETRONASIN-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER - none -
fig|6666666.65894.peg.1070 CDS gi|522808906|gb|ATVF01000006.1| 62070 62780 3 + 711 putative membrane protein - none -
fig|6666666.65894.peg.1071 CDS gi|522808906|gb|ATVF01000006.1| 62818 63201 1 + 384 Putative iron-sulphur protein - none -
fig|6666666.65894.peg.1072 CDS gi|522808906|gb|ATVF01000006.1| 64340 63249 -2 - 1092 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.65894.peg.1073 CDS gi|522808906|gb|ATVF01000006.1| 64817 65791 2 + 975 FIG00545071: hypothetical protein - none -
fig|6666666.65894.peg.1074 CDS gi|522808906|gb|ATVF01000006.1| 65943 66719 3 + 777 hypothetical protein - none -
fig|6666666.65894.peg.1075 CDS gi|522808906|gb|ATVF01000006.1| 67019 66831 -2 - 189 hypothetical protein - none -
fig|6666666.65894.peg.1076 CDS gi|522808906|gb|ATVF01000006.1| 67258 67067 -1 - 192 hypothetical protein - none -
fig|6666666.65894.peg.1077 CDS gi|522808906|gb|ATVF01000006.1| 67217 67339 2 + 123 hypothetical protein - none -
fig|6666666.65894.peg.1078 CDS gi|522808906|gb|ATVF01000006.1| 67460 68212 2 + 753 short chain dehydrogenase - none -
fig|6666666.65894.peg.1079 CDS gi|522808906|gb|ATVF01000006.1| 69802 68276 -1 - 1527 Di/tripeptide permease DtpT Proton-dependent Peptide Transporters
fig|6666666.65894.peg.1080 CDS gi|522808906|gb|ATVF01000006.1| 70824 71306 3 + 483 Nitrite-sensitive transcriptional repressor NsrR Nitrosative stress;
Oxidative stress
fig|6666666.65894.peg.1081 CDS gi|522808906|gb|ATVF01000006.1| 71354 72556 2 + 1203 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.65894.peg.1082 CDS gi|522808906|gb|ATVF01000006.1| 72961 77361 1 + 4401 FIG00545603: hypothetical protein - none -
fig|6666666.65894.peg.1083 CDS gi|522808906|gb|ATVF01000006.1| 78985 77486 -1 - 1500 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65894.peg.1084 CDS gi|522808906|gb|ATVF01000006.1| 80462 79608 -2 - 855 hypothetical protein - none -
fig|6666666.65894.peg.1085 CDS gi|522808906|gb|ATVF01000006.1| 81388 80465 -1 - 924 hypothetical protein - none -
fig|6666666.65894.peg.1086 CDS gi|522808906|gb|ATVF01000006.1| 82444 81716 -1 - 729 Putative stomatin/prohibitin-family membrane protease subunit PA4582 - none -
fig|6666666.65894.peg.1087 CDS gi|522808906|gb|ATVF01000006.1| 83221 82853 -1 - 369 hypothetical protein - none -
fig|6666666.65894.peg.1088 CDS gi|522808906|gb|ATVF01000006.1| 83603 83229 -2 - 375 hypothetical protein - none -
fig|6666666.65894.peg.1089 CDS gi|522808906|gb|ATVF01000006.1| 83785 85344 1 + 1560 Mobile element protein - none -
fig|6666666.65894.peg.1090 CDS gi|522808906|gb|ATVF01000006.1| 85341 86093 3 + 753 Mobile element protein - none -
fig|6666666.65894.peg.1091 CDS gi|522808906|gb|ATVF01000006.1| 86427 86194 -3 - 234 hypothetical protein - none -
fig|6666666.65894.peg.1092 CDS gi|522808906|gb|ATVF01000006.1| 91459 86525 -1 - 4935 putative helicase - none -
fig|6666666.65894.peg.1093 CDS gi|522808906|gb|ATVF01000006.1| 92032 91523 -1 - 510 hypothetical protein - none -
fig|6666666.65894.peg.1094 CDS gi|522808906|gb|ATVF01000006.1| 93004 92204 -1 - 801 Phosphomethylpyrimidine kinase (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65894.peg.1095 CDS gi|522808906|gb|ATVF01000006.1| 93080 93424 2 + 345 FIG00548982: hypothetical protein - none -
fig|6666666.65894.peg.1096 CDS gi|522808906|gb|ATVF01000006.1| 93550 93756 1 + 207 Copper chaperone Copper homeostasis
fig|6666666.65894.peg.1097 CDS gi|522808906|gb|ATVF01000006.1| 95139 93838 -3 - 1302 putative membrane transport protein - none -
fig|6666666.65894.peg.1098 CDS gi|522808906|gb|ATVF01000006.1| 95269 95454 1 + 186 hypothetical protein - none -
fig|6666666.65894.peg.1099 CDS gi|522808906|gb|ATVF01000006.1| 96323 95592 -2 - 732 N-carbamoylsarcosine amidase (EC 3.5.1.59) Creatine and Creatinine Degradation
fig|6666666.65894.peg.1100 CDS gi|522808906|gb|ATVF01000006.1| 96543 96286 -3 - 258 hypothetical protein - none -
fig|6666666.65894.peg.1101 CDS gi|522808906|gb|ATVF01000006.1| 96777 100619 3 + 3843 N-methylhydantoinase A (EC 3.5.2.14) Creatine and Creatinine Degradation;
Hydantoin metabolism
fig|6666666.65894.peg.1102 CDS gi|522808906|gb|ATVF01000006.1| 101436 100687 -3 - 750 Transcriptional regulator, IclR family - none -
fig|6666666.65894.peg.1103 CDS gi|522808906|gb|ATVF01000006.1| 101639 101758 2 + 120 hypothetical protein - none -
fig|6666666.65894.peg.1104 CDS gi|522808906|gb|ATVF01000006.1| 102075 101755 -3 - 321 hypothetical membrane protein - none -
fig|6666666.65894.peg.1105 CDS gi|522808906|gb|ATVF01000006.1| 102808 102095 -1 - 714 Branched-chain amino acid transport protein azlC - none -
fig|6666666.65894.peg.1106 CDS gi|522808906|gb|ATVF01000006.1| 103416 102811 -3 - 606 Putative transcriptional regulator - none -
fig|6666666.65894.peg.1107 CDS gi|522808906|gb|ATVF01000006.1| 104896 103409 -1 - 1488 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65894.peg.1108 CDS gi|522808906|gb|ATVF01000006.1| 105434 105234 -2 - 201 hypothetical protein - none -
fig|6666666.65894.peg.1109 CDS gi|522808906|gb|ATVF01000006.1| 105420 106136 3 + 717 MutT/nudix family protein - none -
fig|6666666.65894.peg.1110 CDS gi|522808906|gb|ATVF01000006.1| 106199 108763 2 + 2565 probable secreted protein. - none -
fig|6666666.65894.peg.1111 CDS gi|522808906|gb|ATVF01000006.1| 108916 112266 1 + 3351 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65894.peg.1112 CDS gi|522808906|gb|ATVF01000006.1| 112607 113257 2 + 651 putative RNA polymerase sigma factor - none -
fig|6666666.65894.peg.1113 CDS gi|522808906|gb|ATVF01000006.1| 113434 114387 1 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.65894.peg.1114 CDS gi|522808906|gb|ATVF01000006.1| 114566 114889 2 + 324 Thioredoxin - none -
fig|6666666.65894.peg.1115 CDS gi|522808906|gb|ATVF01000006.1| 114930 116183 3 + 1254 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.65894.peg.1116 CDS gi|522808906|gb|ATVF01000006.1| 116869 116237 -1 - 633 FIG007808: hypothetical protein - none -
fig|6666666.65894.peg.1117 CDS gi|522808906|gb|ATVF01000006.1| 118046 116889 -2 - 1158 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65894.peg.1118 CDS gi|522808906|gb|ATVF01000006.1| 119030 118107 -2 - 924 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65894.peg.1119 CDS gi|522808906|gb|ATVF01000006.1| 119787 119158 -3 - 630 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.65894.peg.1120 CDS gi|522808906|gb|ATVF01000006.1| 120946 119993 -1 - 954 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
RNA modification cluster
fig|6666666.65894.peg.1121 CDS gi|522808906|gb|ATVF01000006.1| 121348 121043 -1 - 306 Protein YidD RNA modification cluster
fig|6666666.65894.peg.1122 CDS gi|522808906|gb|ATVF01000006.1| 121475 121323 -2 - 153 Ribonuclease P protein component (EC 3.1.26.5) RNA modification cluster;
tRNA processing
fig|6666666.65894.peg.1123 CDS gi|522808906|gb|ATVF01000006.1| 121905 121762 -3 - 144 LSU ribosomal protein L34p RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.65894.peg.1124 CDS gi|522808906|gb|ATVF01000006.1| 122334 122167 -3 - 168 hypothetical protein - none -
fig|6666666.65894.peg.1125 CDS gi|522808906|gb|ATVF01000006.1| 122789 124372 2 + 1584 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65894.peg.1126 CDS gi|522808906|gb|ATVF01000006.1| 124885 125031 1 + 147 hypothetical protein - none -
fig|6666666.65894.peg.1127 CDS gi|522808906|gb|ATVF01000006.1| 125108 126292 2 + 1185 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65894.peg.1128 CDS gi|522808906|gb|ATVF01000006.1| 126385 127566 1 + 1182 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65894.peg.1129 CDS gi|522808906|gb|ATVF01000006.1| 127563 128108 3 + 546 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65894.peg.1130 CDS gi|522808906|gb|ATVF01000006.1| 128241 130295 3 + 2055 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65894.peg.1131 CDS gi|522808906|gb|ATVF01000006.1| 130451 130579 2 + 129 hypothetical protein - none -
fig|6666666.65894.peg.1132 CDS gi|522808906|gb|ATVF01000006.1| 130690 131559 1 + 870 FIG00544157: hypothetical protein - none -
fig|6666666.65894.peg.1133 CDS gi|522808906|gb|ATVF01000006.1| 132248 131556 -2 - 693 FIG00544786: hypothetical protein - none -
fig|6666666.65894.peg.1134 CDS gi|522808906|gb|ATVF01000006.1| 132694 132254 -1 - 441 FIG00544172: hypothetical protein - none -
fig|6666666.65894.peg.1135 CDS gi|522808906|gb|ATVF01000006.1| 133947 132853 -3 - 1095 hypothetical transcriptional regulator - none -
fig|6666666.65894.peg.1136 CDS gi|522808906|gb|ATVF01000006.1| 134295 134032 -3 - 264 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.65894.peg.1137 CDS gi|522808906|gb|ATVF01000006.1| 134501 134292 -2 - 210 Prevent host death protein, Phd antitoxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.65894.peg.1138 CDS gi|522808906|gb|ATVF01000006.1| 134602 137163 1 + 2562 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65894.peg.1139 CDS gi|522808906|gb|ATVF01000006.1| 137167 137511 1 + 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65894.peg.1140 CDS gi|522808906|gb|ATVF01000006.1| 139294 138056 -1 - 1239 putative transmembrane efflux protein - none -
fig|6666666.65894.peg.1141 CDS gi|522808906|gb|ATVF01000006.1| 139453 139902 1 + 450 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.1142 CDS gi|522808906|gb|ATVF01000006.1| 140872 140528 -1 - 345 hypothetical protein - none -
fig|6666666.65894.peg.1143 CDS gi|522808906|gb|ATVF01000006.1| 142204 140921 -1 - 1284 putative secreted protein - none -
fig|6666666.65894.peg.1144 CDS gi|522808906|gb|ATVF01000006.1| 143100 142213 -3 - 888 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65894.peg.1145 CDS gi|522808906|gb|ATVF01000006.1| 143996 143157 -2 - 840 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65894.peg.1146 CDS gi|522808906|gb|ATVF01000006.1| 144294 144019 -3 - 276 hypothetical protein - none -
fig|6666666.65894.peg.1147 CDS gi|522808906|gb|ATVF01000006.1| 144293 144679 2 + 387 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65894.peg.1148 CDS gi|522808906|gb|ATVF01000006.1| 144869 145711 2 + 843 Inositol transport system sugar-binding protein - none -
fig|6666666.65894.peg.1149 CDS gi|522808906|gb|ATVF01000006.1| 145708 146736 1 + 1029 Probable ABC transport protein, membrane component - none -
fig|6666666.65894.peg.1150 CDS gi|522808906|gb|ATVF01000006.1| 146733 147494 3 + 762 putative sugar ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1151 CDS gi|522808906|gb|ATVF01000006.1| 148268 147549 -2 - 720 FIG00547773: hypothetical protein - none -
fig|6666666.65894.peg.1152 CDS gi|522808906|gb|ATVF01000006.1| 148346 148879 2 + 534 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.1153 CDS gi|522808906|gb|ATVF01000006.1| 149012 149668 2 + 657 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.65894.peg.1154 CDS gi|522808906|gb|ATVF01000006.1| 150530 151951 2 + 1422 Dihydropyrimidinase (EC 3.5.2.2) Hydantoin metabolism;
Pyrimidine utilization
fig|6666666.65894.peg.1155 CDS gi|522808906|gb|ATVF01000006.1| 151987 153276 1 + 1290 Beta-ureidopropionase (EC 3.5.1.6) Hydantoin metabolism;
Pyrimidine utilization
fig|6666666.65894.peg.1156 CDS gi|522808906|gb|ATVF01000006.1| 153397 153281 -1 - 117 hypothetical protein - none -
fig|6666666.65894.peg.1157 CDS gi|522808906|gb|ATVF01000006.1| 153382 153615 1 + 234 major facilitator family transporter - none -
fig|6666666.65894.peg.1158 CDS gi|522808906|gb|ATVF01000006.1| 153609 154646 3 + 1038 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65894.peg.1159 CDS gi|522808906|gb|ATVF01000006.1| 154744 154866 1 + 123 hypothetical protein - none -
fig|6666666.65894.peg.1160 CDS gi|522808906|gb|ATVF01000006.1| 154889 155428 2 + 540 hypothetical protein - none -
fig|6666666.65894.peg.1161 CDS gi|522808906|gb|ATVF01000006.1| 155630 156970 2 + 1341 Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Pyrimidine utilization
fig|6666666.65894.peg.1162 CDS gi|522808906|gb|ATVF01000006.1| 156963 158342 3 + 1380 Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) Pyrimidine utilization
fig|6666666.65894.peg.1163 CDS gi|522808906|gb|ATVF01000006.1| 158615 160222 2 + 1608 Cytosine/purine/uracil/thiamine/allantoin permease family protein Purine Utilization
fig|6666666.65894.peg.1164 CDS gi|522808906|gb|ATVF01000006.1| 161834 160335 -2 - 1500 putative regulatory protein - none -
fig|6666666.65894.peg.1165 CDS gi|522808906|gb|ATVF01000006.1| 162445 162323 -1 - 123 hypothetical protein - none -
fig|6666666.65894.peg.1166 CDS gi|522808906|gb|ATVF01000006.1| 162423 163976 3 + 1554 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) - none -
fig|6666666.65894.peg.1167 CDS gi|522808906|gb|ATVF01000006.1| 163990 165309 1 + 1320 PLP-dependent aminotransferase NCgl2355 (class III) - none -
fig|6666666.65894.peg.1168 CDS gi|522808906|gb|ATVF01000006.1| 165393 166238 3 + 846 Mobile element protein - none -
fig|6666666.65894.peg.1169 CDS gi|522808906|gb|ATVF01000006.1| 166490 166738 2 + 249 Mobile element protein - none -
fig|6666666.65894.peg.1170 CDS gi|522808906|gb|ATVF01000006.1| 167034 166849 -3 - 186 hypothetical protein - none -
fig|6666666.65894.peg.1171 CDS gi|522808906|gb|ATVF01000006.1| 167102 167947 2 + 846 hypothetical protein - none -
fig|6666666.65894.peg.1172 CDS gi|522808906|gb|ATVF01000006.1| 168382 168227 -1 - 156 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65894.peg.1173 CDS gi|522808906|gb|ATVF01000006.1| 168381 168575 3 + 195 hypothetical protein - none -
fig|6666666.65894.peg.1174 CDS gi|522808906|gb|ATVF01000006.1| 170601 168601 -3 - 2001 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65894.peg.1175 CDS gi|522808906|gb|ATVF01000006.1| 172013 170598 -2 - 1416 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65894.peg.1176 CDS gi|522808906|gb|ATVF01000006.1| 173441 172017 -2 - 1425 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1177 CDS gi|522808906|gb|ATVF01000006.1| 174817 173438 -1 - 1380 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65894.peg.1178 CDS gi|522808906|gb|ATVF01000006.1| 176178 174814 -3 - 1365 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65894.peg.1179 CDS gi|522808906|gb|ATVF01000006.1| 176636 176178 -2 - 459 FIG00818182: hypothetical protein - none -
fig|6666666.65894.peg.1180 CDS gi|522808906|gb|ATVF01000006.1| 177548 176652 -2 - 897 FIG00543872: hypothetical protein - none -
fig|6666666.65894.peg.1181 CDS gi|522808906|gb|ATVF01000006.1| 179193 178036 -3 - 1158 Membrane protein - none -
fig|6666666.65894.peg.1182 CDS gi|522808906|gb|ATVF01000006.1| 179517 180221 3 + 705 hypothetical protein - none -
fig|6666666.65894.peg.1183 CDS gi|522808906|gb|ATVF01000006.1| 180382 180867 1 + 486 hypothetical protein - none -
fig|6666666.65894.peg.1184 CDS gi|522808906|gb|ATVF01000006.1| 180943 181545 1 + 603 TetR family transcriptional regulator - none -
fig|6666666.65894.peg.1185 CDS gi|522808906|gb|ATVF01000006.1| 182533 181535 -1 - 999 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.65894.peg.1186 CDS gi|522808906|gb|ATVF01000006.1| 182680 182937 1 + 258 hypothetical protein - none -
fig|6666666.65894.peg.1187 CDS gi|522808906|gb|ATVF01000006.1| 183014 184021 2 + 1008 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65894.peg.1188 CDS gi|522808906|gb|ATVF01000006.1| 184018 186783 1 + 2766 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.1189 CDS gi|522808906|gb|ATVF01000006.1| 186852 187487 3 + 636 Bacterial lipocalin - none -
fig|6666666.65894.peg.1190 CDS gi|522808906|gb|ATVF01000006.1| 188063 187479 -2 - 585 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.1191 CDS gi|522808906|gb|ATVF01000006.1| 188152 190284 1 + 2133 FIG00545392: hypothetical protein - none -
fig|6666666.65894.peg.1192 CDS gi|522808906|gb|ATVF01000006.1| 191113 190271 -1 - 843 Probable glycosyltransferase - none -
fig|6666666.65894.peg.1193 CDS gi|522808906|gb|ATVF01000006.1| 191184 192617 3 + 1434 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase;
EC699-706
fig|6666666.65894.peg.1194 CDS gi|522808906|gb|ATVF01000006.1| 194171 192624 -2 - 1548 Predicted nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.65894.peg.1195 CDS gi|522808906|gb|ATVF01000006.1| 194357 195442 2 + 1086 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.65894.peg.1196 CDS gi|522808906|gb|ATVF01000006.1| 195439 196338 1 + 900 Phytoene synthase (EC 2.5.1.32) Carotenoids;
Protein deglycation
fig|6666666.65894.peg.1197 CDS gi|522808906|gb|ATVF01000006.1| 196331 197935 2 + 1605 Phytoene dehydrogenase (EC 1.14.99.-) Carotenoids;
Protein deglycation
fig|6666666.65894.peg.1198 CDS gi|522808906|gb|ATVF01000006.1| 197932 198279 1 + 348 C50 carotenoid epsilon cyclase Carotenoids
fig|6666666.65894.peg.1199 CDS gi|522808906|gb|ATVF01000006.1| 198276 198578 3 + 303 C50 carotenoid epsilon cyclase Carotenoids
fig|6666666.65894.peg.1200 CDS gi|522808906|gb|ATVF01000006.1| 198571 199431 1 + 861 Lycopene elongase (EC 2.5.1.-) Carotenoids
fig|6666666.65894.peg.1201 CDS gi|522808906|gb|ATVF01000006.1| 199480 200334 1 + 855 FIG00547320: hypothetical protein - none -
fig|6666666.65894.peg.1202 CDS gi|522808906|gb|ATVF01000006.1| 200490 201320 3 + 831 FIG00546380: hypothetical protein - none -
fig|6666666.65894.peg.1203 CDS gi|522808906|gb|ATVF01000006.1| 201341 202054 2 + 714 hypothetical protein - none -
fig|6666666.65894.peg.1204 CDS gi|522808906|gb|ATVF01000006.1| 202060 203877 1 + 1818 FIG00544908: hypothetical protein - none -
fig|6666666.65894.peg.1205 CDS gi|522808906|gb|ATVF01000006.1| 204998 203886 -2 - 1113 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65894.peg.1206 CDS gi|522808906|gb|ATVF01000006.1| 205189 206184 1 + 996 FIG00996798: hypothetical protein - none -
fig|6666666.65894.peg.1207 CDS gi|522808906|gb|ATVF01000006.1| 206223 207584 3 + 1362 chloride channel EriC-like protein - none -
fig|6666666.65894.peg.1208 CDS gi|522808906|gb|ATVF01000006.1| 207910 208407 1 + 498 hypothetical protein - none -
fig|6666666.65894.peg.1209 CDS gi|522808906|gb|ATVF01000006.1| 209096 208404 -2 - 693 Riboflavin transporter PnuX Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.65894.peg.1210 CDS gi|522808906|gb|ATVF01000006.1| 209532 210923 3 + 1392 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.65894.peg.1211 CDS gi|522808906|gb|ATVF01000006.1| 212531 210993 -2 - 1539 CitH citrate transporter Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.65894.peg.1212 CDS gi|522808906|gb|ATVF01000006.1| 212777 214414 2 + 1638 Signal transduction histidine kinase CitA regulating citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.65894.peg.1213 CDS gi|522808906|gb|ATVF01000006.1| 214411 215070 1 + 660 Response regulator CitB of citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.65894.peg.1214 CDS gi|522808906|gb|ATVF01000006.1| 215628 216203 3 + 576 hypothetical protein - none -
fig|6666666.65894.peg.1215 CDS gi|522808906|gb|ATVF01000006.1| 216363 217739 3 + 1377 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.1216 CDS gi|522808906|gb|ATVF01000006.1| 219571 217787 -1 - 1785 Regulator of polyketide synthase expression - none -
fig|6666666.65894.peg.1217 CDS gi|522808906|gb|ATVF01000006.1| 220159 219755 -1 - 405 FIG00545336: hypothetical protein - none -
fig|6666666.65894.peg.1218 CDS gi|522808906|gb|ATVF01000006.1| 221118 221312 3 + 195 membrane transport protein - none -
fig|6666666.65894.peg.1219 CDS gi|522808906|gb|ATVF01000006.1| 221309 221524 2 + 216 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) - none -
fig|6666666.65894.peg.1220 CDS gi|522808906|gb|ATVF01000006.1| 221738 222730 2 + 993 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.65894.peg.1221 CDS gi|522808906|gb|ATVF01000006.1| 222730 222969 1 + 240 FIG00545382: hypothetical protein - none -
fig|6666666.65894.peg.1222 CDS gi|522808906|gb|ATVF01000006.1| 223103 222966 -2 - 138 hypothetical protein - none -
fig|6666666.65894.peg.1223 CDS gi|522808906|gb|ATVF01000006.1| 223174 223293 1 + 120 hypothetical protein - none -
fig|6666666.65894.peg.1224 CDS gi|522808910|gb|ATVF01000005.1| 1649 894 -2 - 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.65894.peg.1225 CDS gi|522808910|gb|ATVF01000005.1| 2674 1646 -1 - 1029 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.65894.peg.1226 CDS gi|522808910|gb|ATVF01000005.1| 3737 2718 -2 - 1020 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.65894.peg.1227 CDS gi|522808910|gb|ATVF01000005.1| 4962 3952 -3 - 1011 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.65894.peg.1228 CDS gi|522808910|gb|ATVF01000005.1| 5414 5905 2 + 492 FIG00545949: hypothetical protein - none -
fig|6666666.65894.peg.1229 CDS gi|522808910|gb|ATVF01000005.1| 5881 6006 1 + 126 hypothetical protein - none -
fig|6666666.65894.peg.1230 CDS gi|522808910|gb|ATVF01000005.1| 6205 7053 1 + 849 Phage integrase, site-specific tyrosine recombinase # Pham107 - none -
fig|6666666.65894.peg.1231 CDS gi|522808910|gb|ATVF01000005.1| 7109 7696 2 + 588 Plasmid partitioning protein ParA - none -
fig|6666666.65894.peg.1232 CDS gi|522808910|gb|ATVF01000005.1| 7709 7939 2 + 231 hypothetical protein - none -
fig|6666666.65894.peg.1233 CDS gi|522808910|gb|ATVF01000005.1| 7942 8136 1 + 195 hypothetical protein - none -
fig|6666666.65894.peg.1234 CDS gi|522808910|gb|ATVF01000005.1| 9462 10262 3 + 801 type I restriction-modification system, M subunit, putative - none -
fig|6666666.65894.peg.1235 CDS gi|522808910|gb|ATVF01000005.1| 10268 11062 2 + 795 Type I restriction modification enzyme, S subunit - none -
fig|6666666.65894.peg.1236 CDS gi|522808910|gb|ATVF01000005.1| 11305 11493 1 + 189 hypothetical protein - none -
fig|6666666.65894.peg.1237 CDS gi|522808910|gb|ATVF01000005.1| 12196 12077 -1 - 120 hypothetical protein - none -
fig|6666666.65894.peg.1238 CDS gi|522808910|gb|ATVF01000005.1| 14441 12948 -2 - 1494 hypothetical protein - none -
fig|6666666.65894.peg.1239 CDS gi|522808910|gb|ATVF01000005.1| 15137 15592 2 + 456 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65894.peg.1240 CDS gi|522808910|gb|ATVF01000005.1| 15596 16315 2 + 720 probable replicative DNA helicase - none -
fig|6666666.65894.peg.1241 CDS gi|522808910|gb|ATVF01000005.1| 18174 16798 -3 - 1377 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65894.peg.1242 CDS gi|522808910|gb|ATVF01000005.1| 19671 18244 -3 - 1428 Sporulation protein and related proteins - none -
fig|6666666.65894.peg.1243 CDS gi|522808910|gb|ATVF01000005.1| 20714 19680 -2 - 1035 Mobile element protein - none -
fig|6666666.65894.peg.1244 CDS gi|522808910|gb|ATVF01000005.1| 21673 21506 -1 - 168 hypothetical protein - none -
fig|6666666.65894.peg.1245 CDS gi|522808910|gb|ATVF01000005.1| 22007 21747 -2 - 261 hypothetical protein - none -
fig|6666666.65894.peg.1246 CDS gi|522808910|gb|ATVF01000005.1| 27608 22104 -2 - 5505 hypothetical protein - none -
fig|6666666.65894.peg.1247 CDS gi|522808910|gb|ATVF01000005.1| 27847 27713 -1 - 135 hypothetical protein - none -
fig|6666666.65894.peg.1248 CDS gi|522808910|gb|ATVF01000005.1| 28375 28238 -1 - 138 hypothetical protein - none -
fig|6666666.65894.peg.1249 CDS gi|522808910|gb|ATVF01000005.1| 28850 29044 2 + 195 hypothetical protein - none -
fig|6666666.65894.peg.1250 CDS gi|522808910|gb|ATVF01000005.1| 29607 29164 -3 - 444 hypothetical protein - none -
fig|6666666.65894.peg.1251 CDS gi|522808910|gb|ATVF01000005.1| 29948 33814 2 + 3867 hypothetical protein - none -
fig|6666666.65894.peg.1252 CDS gi|522808910|gb|ATVF01000005.1| 34365 33898 -3 - 468 hypothetical protein - none -
fig|6666666.65894.peg.1253 CDS gi|522808910|gb|ATVF01000005.1| 35501 34362 -2 - 1140 hypothetical protein - none -
fig|6666666.65894.peg.1254 CDS gi|522808910|gb|ATVF01000005.1| 35711 35565 -2 - 147 hypothetical protein - none -
fig|6666666.65894.peg.1255 CDS gi|522808910|gb|ATVF01000005.1| 35997 37004 3 + 1008 hypothetical protein - none -
fig|6666666.65894.peg.1256 CDS gi|522808910|gb|ATVF01000005.1| 37706 37377 -2 - 330 hypothetical protein - none -
fig|6666666.65894.peg.1257 CDS gi|522808910|gb|ATVF01000005.1| 38510 37995 -2 - 516 hypothetical protein - none -
fig|6666666.65894.peg.1258 CDS gi|522808910|gb|ATVF01000005.1| 40284 38545 -3 - 1740 hypothetical protein - none -
fig|6666666.65894.peg.1259 CDS gi|522808910|gb|ATVF01000005.1| 40957 40277 -1 - 681 hypothetical protein - none -
fig|6666666.65894.peg.1260 CDS gi|522808910|gb|ATVF01000005.1| 41562 40969 -3 - 594 hypothetical protein - none -
fig|6666666.65894.peg.1261 CDS gi|522808910|gb|ATVF01000005.1| 43162 41576 -1 - 1587 hypothetical protein - none -
fig|6666666.65894.peg.1262 CDS gi|522808910|gb|ATVF01000005.1| 43380 43159 -3 - 222 hypothetical protein - none -
fig|6666666.65894.peg.1263 CDS gi|522808910|gb|ATVF01000005.1| 45092 43416 -2 - 1677 FIG00547607: hypothetical protein - none -
fig|6666666.65894.peg.1264 CDS gi|522808910|gb|ATVF01000005.1| 45901 45089 -1 - 813 hypothetical protein - none -
fig|6666666.65894.peg.1265 CDS gi|522808910|gb|ATVF01000005.1| 47410 45920 -1 - 1491 FIG00548804: hypothetical protein - none -
fig|6666666.65894.peg.1266 CDS gi|522808910|gb|ATVF01000005.1| 48977 47388 -2 - 1590 hypothetical protein - none -
fig|6666666.65894.peg.1267 CDS gi|522808910|gb|ATVF01000005.1| 49855 48998 -1 - 858 hypothetical protein - none -
fig|6666666.65894.peg.1268 CDS gi|522808910|gb|ATVF01000005.1| 50472 49855 -3 - 618 putative involved in replication/partition - none -
fig|6666666.65894.peg.1269 CDS gi|522808910|gb|ATVF01000005.1| 50821 50546 -1 - 276 hypothetical protein - none -
fig|6666666.65894.peg.1270 CDS gi|522808910|gb|ATVF01000005.1| 51105 50818 -3 - 288 hypothetical protein - none -
fig|6666666.65894.peg.1271 CDS gi|522808910|gb|ATVF01000005.1| 51434 51108 -2 - 327 hypothetical protein - none -
fig|6666666.65894.peg.1272 CDS gi|522808910|gb|ATVF01000005.1| 53389 51758 -1 - 1632 hypothetical protein - none -
fig|6666666.65894.peg.1273 CDS gi|522808910|gb|ATVF01000005.1| 54062 53382 -2 - 681 hypothetical protein - none -
fig|6666666.65894.peg.1274 CDS gi|522808910|gb|ATVF01000005.1| 54893 54066 -2 - 828 hypothetical protein - none -
fig|6666666.65894.peg.1275 CDS gi|522808910|gb|ATVF01000005.1| 55557 55045 -3 - 513 hypothetical protein - none -
fig|6666666.65894.peg.1276 CDS gi|522808910|gb|ATVF01000005.1| 55933 55787 -1 - 147 hypothetical protein - none -
fig|6666666.65894.peg.1277 CDS gi|522808910|gb|ATVF01000005.1| 57390 56251 -3 - 1140 hypothetical protein - none -
fig|6666666.65894.peg.1278 CDS gi|522808910|gb|ATVF01000005.1| 57422 58093 2 + 672 hypothetical protein - none -
fig|6666666.65894.peg.1279 CDS gi|522808910|gb|ATVF01000005.1| 58350 58234 -3 - 117 hypothetical protein - none -
fig|6666666.65894.peg.1280 CDS gi|522808910|gb|ATVF01000005.1| 59170 59322 1 + 153 hypothetical protein - none -
fig|6666666.65894.peg.1281 CDS gi|522808910|gb|ATVF01000005.1| 60687 60193 -3 - 495 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65894.peg.1282 CDS gi|522808910|gb|ATVF01000005.1| 61617 60715 -3 - 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65894.peg.1283 CDS gi|522808910|gb|ATVF01000005.1| 62317 61628 -1 - 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65894.peg.1284 CDS gi|522808910|gb|ATVF01000005.1| 63824 62718 -2 - 1107 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65894.peg.1285 CDS gi|522808910|gb|ATVF01000005.1| 63912 64778 3 + 867 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65894.peg.1286 CDS gi|522808910|gb|ATVF01000005.1| 64785 65573 3 + 789 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65894.peg.1287 CDS gi|522808910|gb|ATVF01000005.1| 66792 65653 -3 - 1140 FIG00545324: hypothetical protein - none -
fig|6666666.65894.peg.1288 CDS gi|522808910|gb|ATVF01000005.1| 66886 67008 1 + 123 hypothetical protein - none -
fig|6666666.65894.peg.1289 CDS gi|522808910|gb|ATVF01000005.1| 67785 67189 -3 - 597 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) CBSS-1806.1.peg.1285;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65894.peg.1290 CDS gi|522808910|gb|ATVF01000005.1| 68690 67782 -2 - 909 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) CBSS-1806.1.peg.1285;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65894.peg.1291 CDS gi|522808910|gb|ATVF01000005.1| 68779 70155 1 + 1377 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65894.peg.1292 CDS gi|522808910|gb|ATVF01000005.1| 73087 70196 -1 - 2892 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65894.peg.1293 CDS gi|522808910|gb|ATVF01000005.1| 73243 73767 1 + 525 FIG129854: hypothetical protein - none -
fig|6666666.65894.peg.1294 CDS gi|522808910|gb|ATVF01000005.1| 73842 74519 3 + 678 FIG00544133: hypothetical protein - none -
fig|6666666.65894.peg.1295 CDS gi|522808910|gb|ATVF01000005.1| 75571 74516 -1 - 1056 Lon-like protease with PDZ domain - none -
fig|6666666.65894.peg.1296 CDS gi|522808910|gb|ATVF01000005.1| 75657 77060 3 + 1404 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65894.peg.1297 CDS gi|522808910|gb|ATVF01000005.1| 77559 77071 -3 - 489 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65894.peg.1298 CDS gi|522808910|gb|ATVF01000005.1| 77626 78417 1 + 792 FIG00544187: hypothetical protein - none -
fig|6666666.65894.peg.1299 CDS gi|522808910|gb|ATVF01000005.1| 80450 78414 -2 - 2037 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65894.peg.1300 CDS gi|522808910|gb|ATVF01000005.1| 81200 80481 -2 - 720 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65894.peg.1301 CDS gi|522808910|gb|ATVF01000005.1| 82258 81200 -1 - 1059 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65894.peg.1302 CDS gi|522808910|gb|ATVF01000005.1| 85514 82272 -2 - 3243 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65894.peg.1303 CDS gi|522808910|gb|ATVF01000005.1| 88560 85507 -3 - 3054 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65894.peg.1304 CDS gi|522808910|gb|ATVF01000005.1| 89331 88564 -3 - 768 FIG00544868: hypothetical protein - none -
fig|6666666.65894.peg.1305 CDS gi|522808910|gb|ATVF01000005.1| 90183 89341 -3 - 843 FIG00544386: hypothetical protein - none -
fig|6666666.65894.peg.1306 CDS gi|522808910|gb|ATVF01000005.1| 90449 90222 -2 - 228 FIG00543928: hypothetical protein - none -
fig|6666666.65894.peg.1307 CDS gi|522808910|gb|ATVF01000005.1| 90566 91801 2 + 1236 putative ATP-dependent RNA helicase - none -
fig|6666666.65894.peg.1308 CDS gi|522808910|gb|ATVF01000005.1| 91805 92998 2 + 1194 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65894.peg.1309 CDS gi|522808910|gb|ATVF01000005.1| 93411 92995 -3 - 417 FIG00543921: hypothetical protein - none -
fig|6666666.65894.peg.1310 CDS gi|522808910|gb|ATVF01000005.1| 93974 94234 2 + 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65894.peg.1311 CDS gi|522808910|gb|ATVF01000005.1| 95344 94718 -1 - 627 putative RNA polymerase sigma factor - none -
fig|6666666.65894.peg.1312 CDS gi|522808910|gb|ATVF01000005.1| 95510 96622 2 + 1113 FIG00544692: hypothetical protein - none -
fig|6666666.65894.peg.1313 CDS gi|522808910|gb|ATVF01000005.1| 97242 96619 -3 - 624 FIG00543821: hypothetical protein - none -
fig|6666666.65894.peg.1314 CDS gi|522808910|gb|ATVF01000005.1| 97280 98563 2 + 1284 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.1315 CDS gi|522808910|gb|ATVF01000005.1| 98556 99545 3 + 990 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65894.peg.1316 CDS gi|522808910|gb|ATVF01000005.1| 100052 99546 -2 - 507 FIG00544397: hypothetical protein - none -
fig|6666666.65894.peg.1317 CDS gi|522808910|gb|ATVF01000005.1| 100465 100055 -1 - 411 FIG00996758: hypothetical protein - none -
fig|6666666.65894.peg.1318 CDS gi|522808910|gb|ATVF01000005.1| 103480 100961 -1 - 2520 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65894.peg.1319 CDS gi|522808910|gb|ATVF01000005.1| 103439 103663 2 + 225 hypothetical protein - none -
fig|6666666.65894.peg.1320 CDS gi|522808910|gb|ATVF01000005.1| 104298 103624 -3 - 675 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65894.peg.1321 CDS gi|522808910|gb|ATVF01000005.1| 104926 104441 -1 - 486 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.65894.peg.1322 CDS gi|522808910|gb|ATVF01000005.1| 106725 105031 -3 - 1695 LpqB - none -
fig|6666666.65894.peg.1323 CDS gi|522808910|gb|ATVF01000005.1| 108377 106722 -2 - 1656 Putative two component system sensor kinase - none -
fig|6666666.65894.peg.1324 CDS gi|522808910|gb|ATVF01000005.1| 109089 108409 -3 - 681 DNA-binding response regulator mtrA - none -
fig|6666666.65894.peg.1325 CDS gi|522808910|gb|ATVF01000005.1| 109725 109114 -3 - 612 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.65894.peg.1326 CDS gi|522808910|gb|ATVF01000005.1| 111161 109725 -2 - 1437 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis
fig|6666666.65894.peg.1327 CDS gi|522808910|gb|ATVF01000005.1| 111623 111270 -2 - 354 FIG00544092: hypothetical protein - none -
fig|6666666.65894.peg.1328 CDS gi|522808910|gb|ATVF01000005.1| 111895 112650 1 + 756 FIG00544185: hypothetical protein - none -
fig|6666666.65894.peg.1329 CDS gi|522808910|gb|ATVF01000005.1| 113910 112726 -3 - 1185 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65894.peg.1330 CDS gi|522808910|gb|ATVF01000005.1| 114918 113911 -3 - 1008 FIG00545059: hypothetical protein - none -
fig|6666666.65894.peg.1331 CDS gi|522808910|gb|ATVF01000005.1| 116358 114982 -3 - 1377 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65894.peg.1332 CDS gi|522808910|gb|ATVF01000005.1| 116829 116428 -3 - 402 FIG00543823: hypothetical protein - none -
fig|6666666.65894.peg.1333 CDS gi|522808910|gb|ATVF01000005.1| 116963 117382 2 + 420 FIG00544777: hypothetical protein - none -
fig|6666666.65894.peg.1334 CDS gi|522808910|gb|ATVF01000005.1| 117750 117436 -3 - 315 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65894.peg.1335 CDS gi|522808910|gb|ATVF01000005.1| 119232 118165 -3 - 1068 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65894.peg.1336 CDS gi|522808910|gb|ATVF01000005.1| 120445 119537 -1 - 909 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65894.peg.1337 CDS gi|522808910|gb|ATVF01000005.1| 120813 122390 3 + 1578 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65894.peg.1338 CDS gi|522808910|gb|ATVF01000005.1| 122508 123158 3 + 651 FIG00996117: hypothetical protein - none -
fig|6666666.65894.peg.1339 CDS gi|522808910|gb|ATVF01000005.1| 123212 124216 2 + 1005 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.65894.peg.1340 CDS gi|522808910|gb|ATVF01000005.1| 124352 125626 2 + 1275 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.65894.peg.1341 CDS gi|522808910|gb|ATVF01000005.1| 125708 126055 2 + 348 hypothetical protein - none -
fig|6666666.65894.peg.1342 CDS gi|522808910|gb|ATVF01000005.1| 126134 127147 2 + 1014 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.65894.peg.1343 CDS gi|522808910|gb|ATVF01000005.1| 127144 127980 1 + 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.65894.peg.1344 CDS gi|522808910|gb|ATVF01000005.1| 128011 128229 1 + 219 FIG00548589: hypothetical protein - none -
fig|6666666.65894.peg.1345 CDS gi|522808910|gb|ATVF01000005.1| 128384 128226 -2 - 159 hypothetical protein - none -
fig|6666666.65894.peg.1346 CDS gi|522808910|gb|ATVF01000005.1| 128687 128424 -2 - 264 Glyoxalase family protein - none -
fig|6666666.65894.peg.1347 CDS gi|522808910|gb|ATVF01000005.1| 128715 129278 3 + 564 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65894.peg.1348 CDS gi|522808910|gb|ATVF01000005.1| 129721 129275 -1 - 447 FIG00546022: hypothetical protein - none -
fig|6666666.65894.peg.1349 CDS gi|522808910|gb|ATVF01000005.1| 130218 129721 -3 - 498 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65894.peg.1350 CDS gi|522808910|gb|ATVF01000005.1| 130674 130312 -3 - 363 FIG00547820: hypothetical protein - none -
fig|6666666.65894.peg.1351 CDS gi|522808910|gb|ATVF01000005.1| 132716 130740 -2 - 1977 Kup system potassium uptake protein Potassium homeostasis
fig|6666666.65894.peg.1352 CDS gi|522808910|gb|ATVF01000005.1| 134015 132777 -2 - 1239 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65894.peg.1353 CDS gi|522808910|gb|ATVF01000005.1| 134552 134052 -2 - 501 FIG00545249: hypothetical protein - none -
fig|6666666.65894.peg.1354 CDS gi|522808910|gb|ATVF01000005.1| 135363 134554 -3 - 810 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.65894.peg.1355 CDS gi|522808910|gb|ATVF01000005.1| 135604 137235 1 + 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.65894.peg.1356 CDS gi|522808910|gb|ATVF01000005.1| 137628 139241 3 + 1614 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.65894.peg.1357 CDS gi|522808910|gb|ATVF01000005.1| 139286 139525 2 + 240 FIG00544173: hypothetical protein - none -
fig|6666666.65894.peg.1358 CDS gi|522808910|gb|ATVF01000005.1| 139609 140220 1 + 612 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65894.peg.1359 CDS gi|522808910|gb|ATVF01000005.1| 140246 140653 2 + 408 FIG00547406: hypothetical protein - none -
fig|6666666.65894.peg.1360 CDS gi|522808910|gb|ATVF01000005.1| 141822 140740 -3 - 1083 FIG00548218: hypothetical protein - none -
fig|6666666.65894.peg.1361 CDS gi|522808910|gb|ATVF01000005.1| 142101 142997 3 + 897 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65894.peg.1362 CDS gi|522808910|gb|ATVF01000005.1| 143220 144995 3 + 1776 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65894.peg.1363 CDS gi|522808910|gb|ATVF01000005.1| 145070 145447 2 + 378 No significant database matches - none -
fig|6666666.65894.peg.1364 CDS gi|522808910|gb|ATVF01000005.1| 145521 146609 3 + 1089 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis);
Zinc regulated enzymes
fig|6666666.65894.peg.1365 CDS gi|522808910|gb|ATVF01000005.1| 147503 146589 -2 - 915 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65894.peg.1366 CDS gi|522808910|gb|ATVF01000005.1| 151028 147606 -2 - 3423 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65894.peg.1367 CDS gi|522808910|gb|ATVF01000005.1| 152893 151484 -1 - 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.65894.peg.1368 CDS gi|522808910|gb|ATVF01000005.1| 154219 153032 -1 - 1188 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65894.peg.1369 CDS gi|522808910|gb|ATVF01000005.1| 154324 155916 1 + 1593 putative phospho-sugar mutase - none -
fig|6666666.65894.peg.1370 CDS gi|522808910|gb|ATVF01000005.1| 156335 155913 -2 - 423 Putative DNA-binding protein - none -
fig|6666666.65894.peg.1371 CDS gi|522808910|gb|ATVF01000005.1| 157030 156395 -1 - 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.65894.peg.1372 CDS gi|522808910|gb|ATVF01000005.1| 157129 157392 1 + 264 hypothetical protein - none -
fig|6666666.65894.peg.1373 CDS gi|522808910|gb|ATVF01000005.1| 157389 158219 3 + 831 FIG00544549: hypothetical protein - none -
fig|6666666.65894.peg.1374 CDS gi|522808910|gb|ATVF01000005.1| 158318 159547 2 + 1230 FIG026501: hypothetical protein - none -
fig|6666666.65894.peg.1375 CDS gi|522808910|gb|ATVF01000005.1| 160837 159650 -1 - 1188 Monomeric sarcosine oxidase (EC 1.5.3.1) - none -
fig|6666666.65894.peg.1376 CDS gi|522808910|gb|ATVF01000005.1| 162055 160868 -1 - 1188 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65894.peg.1377 CDS gi|522808910|gb|ATVF01000005.1| 162415 163755 1 + 1341 amino acid permease family protein - none -
fig|6666666.65894.peg.1378 CDS gi|522808910|gb|ATVF01000005.1| 163920 165281 3 + 1362 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1379 CDS gi|522808910|gb|ATVF01000005.1| 166180 165278 -1 - 903 FIG00545198: hypothetical protein - none -
fig|6666666.65894.peg.1380 CDS gi|522808910|gb|ATVF01000005.1| 167338 166253 -1 - 1086 putative membrane protein - none -
fig|6666666.65894.peg.1381 CDS gi|522808910|gb|ATVF01000005.1| 168505 167465 -1 - 1041 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65894.peg.1382 CDS gi|522808910|gb|ATVF01000005.1| 168925 168734 -1 - 192 FIG00544199: hypothetical protein - none -
fig|6666666.65894.peg.1383 CDS gi|522808910|gb|ATVF01000005.1| 169773 169114 -3 - 660 FIG00544233: hypothetical protein - none -
fig|6666666.65894.peg.1384 CDS gi|522808910|gb|ATVF01000005.1| 170743 169775 -1 - 969 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65894.peg.1385 CDS gi|522808910|gb|ATVF01000005.1| 171984 170809 -3 - 1176 putative transport protein - none -
fig|6666666.65894.peg.1386 CDS gi|522808910|gb|ATVF01000005.1| 172241 173293 2 + 1053 Iron compound ABC uptake transporter substrate-binding protein PiaA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65894.peg.1387 CDS gi|522808910|gb|ATVF01000005.1| 173399 174343 2 + 945 transport system permease protein - none -
fig|6666666.65894.peg.1388 CDS gi|522808910|gb|ATVF01000005.1| 174340 175383 1 + 1044 ABC-type transporter, permease component - none -
fig|6666666.65894.peg.1389 CDS gi|522808910|gb|ATVF01000005.1| 175380 176189 3 + 810 putative iron transporter ATP-binding protein - none -
fig|6666666.65894.peg.1390 CDS gi|522808910|gb|ATVF01000005.1| 176200 177111 1 + 912 FIG00544109: hypothetical protein - none -
fig|6666666.65894.peg.1391 CDS gi|522808910|gb|ATVF01000005.1| 177195 179411 3 + 2217 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.65894.peg.1392 CDS gi|522808910|gb|ATVF01000005.1| 179479 180189 1 + 711 FIG00547148: hypothetical protein - none -
fig|6666666.65894.peg.1393 CDS gi|522808910|gb|ATVF01000005.1| 180435 180235 -3 - 201 hypothetical protein - none -
fig|6666666.65894.peg.1394 CDS gi|522808910|gb|ATVF01000005.1| 182652 180451 -3 - 2202 Carbon starvation protein A Carbon Starvation
fig|6666666.65894.peg.1395 CDS gi|522808910|gb|ATVF01000005.1| 183053 184366 2 + 1314 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65894.peg.1396 CDS gi|522808910|gb|ATVF01000005.1| 184560 185693 3 + 1134 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65894.peg.1397 CDS gi|522808910|gb|ATVF01000005.1| 185783 186793 2 + 1011 hypothetical protein - none -
fig|6666666.65894.peg.1398 CDS gi|522808910|gb|ATVF01000005.1| 187106 186795 -2 - 312 FIG00546438: hypothetical protein - none -
fig|6666666.65894.peg.1399 CDS gi|522808910|gb|ATVF01000005.1| 188037 187183 -3 - 855 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.65894.peg.1400 CDS gi|522808910|gb|ATVF01000005.1| 188083 188556 1 + 474 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65894.peg.1401 CDS gi|522808910|gb|ATVF01000005.1| 189028 188576 -1 - 453 Cytidine/deoxycytidylate deaminase, zinc-binding region - none -
fig|6666666.65894.peg.1402 CDS gi|522808910|gb|ATVF01000005.1| 189811 189035 -1 - 777 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65894.peg.1403 CDS gi|522808910|gb|ATVF01000005.1| 190000 190800 1 + 801 FIG00545808: hypothetical protein - none -
fig|6666666.65894.peg.1404 CDS gi|522808910|gb|ATVF01000005.1| 191487 190807 -3 - 681 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.65894.peg.1405 CDS gi|522808910|gb|ATVF01000005.1| 192877 191489 -1 - 1389 transmembrane protein, distant homology with ydbT - none -
fig|6666666.65894.peg.1406 CDS gi|522808910|gb|ATVF01000005.1| 193386 192874 -3 - 513 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65894.peg.1407 CDS gi|522808910|gb|ATVF01000005.1| 196510 193397 -1 - 3114 DNA polymerase III alpha subunit (EC 2.7.7.7) Phage replication
fig|6666666.65894.peg.1408 CDS gi|522808910|gb|ATVF01000005.1| 196728 197627 3 + 900 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.65894.peg.1409 CDS gi|522808910|gb|ATVF01000005.1| 197778 198860 3 + 1083 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.65894.peg.1410 CDS gi|522808910|gb|ATVF01000005.1| 198857 199534 2 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis
fig|6666666.65894.peg.1411 CDS gi|522808910|gb|ATVF01000005.1| 199645 200382 1 + 738 ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1412 CDS gi|522808910|gb|ATVF01000005.1| 200379 201365 3 + 987 FIG00547001: hypothetical protein - none -
fig|6666666.65894.peg.1413 CDS gi|522808910|gb|ATVF01000005.1| 201375 202859 3 + 1485 FIG00547001: hypothetical protein - none -
fig|6666666.65894.peg.1414 CDS gi|522808910|gb|ATVF01000005.1| 203709 202846 -3 - 864 FIG00546271: hypothetical protein - none -
fig|6666666.65894.peg.1415 CDS gi|522808910|gb|ATVF01000005.1| 203926 204564 1 + 639 No significant database matches - none -
fig|6666666.65894.peg.1416 CDS gi|522808910|gb|ATVF01000005.1| 206261 204660 -2 - 1602 DNA polymerase IV-like protein ImuB DNA repair, bacterial;
DNA replication strays
fig|6666666.65894.peg.1417 CDS gi|522808910|gb|ATVF01000005.1| 207034 206261 -1 - 774 FIG00544716: hypothetical protein - none -
fig|6666666.65894.peg.1418 CDS gi|522808910|gb|ATVF01000005.1| 207152 207592 2 + 441 hypothetical membrane protein - none -
fig|6666666.65894.peg.1419 CDS gi|522808910|gb|ATVF01000005.1| 207944 207633 -2 - 312 FIG00545838: hypothetical protein - none -
fig|6666666.65894.peg.1420 CDS gi|522808910|gb|ATVF01000005.1| 208636 207944 -1 - 693 two-component system response regulator - none -
fig|6666666.65894.peg.1421 CDS gi|522808910|gb|ATVF01000005.1| 209814 208690 -3 - 1125 FIG00545356: hypothetical protein - none -
fig|6666666.65894.peg.1422 CDS gi|522808910|gb|ATVF01000005.1| 210070 211215 1 + 1146 FIG00543896: hypothetical protein - none -
fig|6666666.65894.peg.1423 CDS gi|522808910|gb|ATVF01000005.1| 211685 211227 -2 - 459 FIG00548619: hypothetical protein - none -
fig|6666666.65894.peg.1424 CDS gi|522808910|gb|ATVF01000005.1| 213409 211916 -1 - 1494 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65894.peg.1425 CDS gi|522808910|gb|ATVF01000005.1| 215001 213607 -3 - 1395 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.65894.peg.1426 CDS gi|522808910|gb|ATVF01000005.1| 216359 215190 -2 - 1170 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65894.peg.1427 CDS gi|522808910|gb|ATVF01000005.1| 218021 216501 -2 - 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65894.peg.1428 CDS gi|522808910|gb|ATVF01000005.1| 218200 218571 1 + 372 FIG00544572: hypothetical protein - none -
fig|6666666.65894.peg.1429 CDS gi|522808910|gb|ATVF01000005.1| 219585 218638 -3 - 948 FIG00544252: hypothetical protein - none -
fig|6666666.65894.peg.1430 CDS gi|522808910|gb|ATVF01000005.1| 220151 219588 -2 - 564 putative RNA polymerase sigma factor - none -
fig|6666666.65894.peg.1431 CDS gi|522808910|gb|ATVF01000005.1| 220557 220856 3 + 300 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.65894.peg.1432 CDS gi|522808910|gb|ATVF01000005.1| 222588 220981 -3 - 1608 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65894.peg.1433 CDS gi|522808910|gb|ATVF01000005.1| 222898 222599 -1 - 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65894.peg.1434 CDS gi|522808910|gb|ATVF01000005.1| 223540 223115 -1 - 426 FIG00543939: hypothetical protein - none -
fig|6666666.65894.peg.1435 CDS gi|522808910|gb|ATVF01000005.1| 225351 223594 -3 - 1758 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65894.peg.1436 CDS gi|522808910|gb|ATVF01000005.1| 226404 225370 -3 - 1035 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65894.peg.1437 CDS gi|522808910|gb|ATVF01000005.1| 226941 226408 -3 - 534 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Ribosome biogenesis bacterial
fig|6666666.65894.peg.1438 CDS gi|522808910|gb|ATVF01000005.1| 227615 226938 -2 - 678 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.65894.peg.1439 CDS gi|522808910|gb|ATVF01000005.1| 228905 227622 -2 - 1284 putative aminopeptidase - none -
fig|6666666.65894.peg.1440 CDS gi|522808910|gb|ATVF01000005.1| 230555 228954 -2 - 1602 putative transport protein - none -
fig|6666666.65894.peg.1441 CDS gi|522808910|gb|ATVF01000005.1| 231215 230712 -2 - 504 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.65894.peg.1442 CDS gi|522808910|gb|ATVF01000005.1| 232347 231205 -3 - 1143 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65894.peg.1443 CDS gi|522808910|gb|ATVF01000005.1| 232416 233315 3 + 900 FIG00545792: hypothetical protein - none -
fig|6666666.65894.peg.1444 CDS gi|522808910|gb|ATVF01000005.1| 233530 233360 -1 - 171 hypothetical protein - none -
fig|6666666.65894.peg.1445 CDS gi|522808910|gb|ATVF01000005.1| 235103 233586 -2 - 1518 Mlr2412 protein - none -
fig|6666666.65894.peg.1446 CDS gi|522808910|gb|ATVF01000005.1| 235405 235100 -1 - 306 hypothetical protein - none -
fig|6666666.65894.peg.1447 CDS gi|522808910|gb|ATVF01000005.1| 236846 235503 -2 - 1344 Phosphoglucosamine mutase (EC 5.4.2.10) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65894.peg.1448 CDS gi|522808910|gb|ATVF01000005.1| 238199 237564 -2 - 636 Transposase, IS4 - none -
fig|6666666.65894.peg.1449 CDS gi|522808910|gb|ATVF01000005.1| 238367 238492 2 + 126 hypothetical protein - none -
fig|6666666.65894.peg.1450 CDS gi|522808911|gb|ATVF01000004.1| 721 2067 1 + 1347 TPR-repeat-containing protein - none -
fig|6666666.65894.peg.1451 CDS gi|522808911|gb|ATVF01000004.1| 2109 3062 3 + 954 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65894.peg.1452 CDS gi|522808911|gb|ATVF01000004.1| 3056 3214 2 + 159 hypothetical protein - none -
fig|6666666.65894.peg.1453 CDS gi|522808911|gb|ATVF01000004.1| 3253 4074 1 + 822 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.65894.peg.1454 CDS gi|522808911|gb|ATVF01000004.1| 4074 5024 3 + 951 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.65894.peg.1455 CDS gi|522808911|gb|ATVF01000004.1| 5096 6877 2 + 1782 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.65894.peg.1456 CDS gi|522808911|gb|ATVF01000004.1| 6973 8157 1 + 1185 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.65894.peg.1457 CDS gi|522808911|gb|ATVF01000004.1| 8178 9182 3 + 1005 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.65894.peg.1458 CDS gi|522808911|gb|ATVF01000004.1| 9565 11229 1 + 1665 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.65894.peg.1459 CDS gi|522808911|gb|ATVF01000004.1| 11351 11917 2 + 567 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65894.peg.1460 CDS gi|522808911|gb|ATVF01000004.1| 11914 12828 1 + 915 Tyrosine recombinase XerD - none -
fig|6666666.65894.peg.1461 CDS gi|522808911|gb|ATVF01000004.1| 13311 14150 3 + 840 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65894.peg.1462 CDS gi|522808911|gb|ATVF01000004.1| 14265 14140 -3 - 126 hypothetical protein - none -
fig|6666666.65894.peg.1463 CDS gi|522808911|gb|ATVF01000004.1| 14242 15132 1 + 891 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65894.peg.1464 CDS gi|522808911|gb|ATVF01000004.1| 15715 15152 -1 - 564 FIG00546511: hypothetical protein - none -
fig|6666666.65894.peg.1465 CDS gi|522808911|gb|ATVF01000004.1| 16029 16850 3 + 822 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65894.peg.1466 CDS gi|522808911|gb|ATVF01000004.1| 16896 17474 3 + 579 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65894.peg.1467 CDS gi|522808911|gb|ATVF01000004.1| 17600 18562 2 + 963 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65894.peg.1468 CDS gi|522808911|gb|ATVF01000004.1| 18559 19269 1 + 711 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65894.peg.1469 CDS gi|522808911|gb|ATVF01000004.1| 19266 20915 3 + 1650 GTP-binding protein EngA - none -
fig|6666666.65894.peg.1470 CDS gi|522808911|gb|ATVF01000004.1| 21410 21000 -2 - 411 hypothetical protein - none -
fig|6666666.65894.peg.1471 CDS gi|522808911|gb|ATVF01000004.1| 22395 21592 -3 - 804 FIG00545160: hypothetical protein - none -
fig|6666666.65894.peg.1472 CDS gi|522808911|gb|ATVF01000004.1| 22584 24056 3 + 1473 putative ABC transporter permease protein - none -
fig|6666666.65894.peg.1473 CDS gi|522808911|gb|ATVF01000004.1| 24053 25849 2 + 1797 ABC-type transport system ATPase component - none -
fig|6666666.65894.peg.1474 CDS gi|522808911|gb|ATVF01000004.1| 25908 26714 3 + 807 FIG00544366: hypothetical protein - none -
fig|6666666.65894.peg.1475 CDS gi|522808911|gb|ATVF01000004.1| 28281 26728 -3 - 1554 NhaP-type Na+/H+ and K+/H+ antiporter - none -
fig|6666666.65894.peg.1476 CDS gi|522808911|gb|ATVF01000004.1| 28486 29457 1 + 972 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65894.peg.1477 CDS gi|522808911|gb|ATVF01000004.1| 29951 29673 -2 - 279 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.65894.peg.1478 CDS gi|522808911|gb|ATVF01000004.1| 31211 30063 -2 - 1149 hydrolase of the alpha/beta superfamily - none -
fig|6666666.65894.peg.1479 CDS gi|522808911|gb|ATVF01000004.1| 31451 33742 2 + 2292 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65894.peg.1480 CDS gi|522808911|gb|ATVF01000004.1| 33881 34312 2 + 432 FIG00672531: hypothetical protein - none -
fig|6666666.65894.peg.1481 CDS gi|522808911|gb|ATVF01000004.1| 34450 35193 1 + 744 FIG00545122: hypothetical protein - none -
fig|6666666.65894.peg.1482 CDS gi|522808911|gb|ATVF01000004.1| 35201 35830 2 + 630 FIG00544095: hypothetical protein - none -
fig|6666666.65894.peg.1483 CDS gi|522808911|gb|ATVF01000004.1| 35957 36532 2 + 576 FIG00544641: hypothetical protein - none -
fig|6666666.65894.peg.1484 CDS gi|522808911|gb|ATVF01000004.1| 38065 36620 -1 - 1446 Putative secreted protein - none -
fig|6666666.65894.peg.1485 CDS gi|522808911|gb|ATVF01000004.1| 39001 38102 -1 - 900 FIG00545058: hypothetical protein - none -
fig|6666666.65894.peg.1486 CDS gi|522808911|gb|ATVF01000004.1| 40076 39012 -2 - 1065 FIG00546228: hypothetical protein - none -
fig|6666666.65894.peg.1487 CDS gi|522808911|gb|ATVF01000004.1| 41416 40073 -1 - 1344 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65894.peg.1488 CDS gi|522808911|gb|ATVF01000004.1| 42886 41501 -1 - 1386 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65894.peg.1489 CDS gi|522808911|gb|ATVF01000004.1| 44451 42997 -3 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.65894.peg.1490 CDS gi|522808911|gb|ATVF01000004.1| 44615 45055 2 + 441 FIG00544657: hypothetical protein - none -
fig|6666666.65894.peg.1491 CDS gi|522808911|gb|ATVF01000004.1| 45119 45703 2 + 585 FIG00544791: hypothetical protein - none -
fig|6666666.65894.peg.1492 CDS gi|522808911|gb|ATVF01000004.1| 45743 46495 2 + 753 ABC-type transporter, ATPase component - none -
fig|6666666.65894.peg.1493 CDS gi|522808911|gb|ATVF01000004.1| 46492 47235 1 + 744 FIG00543935: hypothetical protein - none -
fig|6666666.65894.peg.1494 CDS gi|522808911|gb|ATVF01000004.1| 49560 47332 -3 - 2229 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65894.peg.1495 CDS gi|522808911|gb|ATVF01000004.1| 50368 49562 -1 - 807 Hydroxyethylthiazole kinase (EC 2.7.1.50) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65894.peg.1496 CDS gi|522808911|gb|ATVF01000004.1| 51963 50563 -3 - 1401 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1497 CDS gi|522808911|gb|ATVF01000004.1| 52338 53654 3 + 1317 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65894.peg.1498 CDS gi|522808911|gb|ATVF01000004.1| 55105 53696 -1 - 1410 putative transport protein - none -
fig|6666666.65894.peg.1499 CDS gi|522808911|gb|ATVF01000004.1| 55797 55321 -3 - 477 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.65894.peg.1500 CDS gi|522808911|gb|ATVF01000004.1| 56127 56699 3 + 573 FIG00545814: hypothetical protein - none -
fig|6666666.65894.peg.1501 CDS gi|522808911|gb|ATVF01000004.1| 56862 57347 3 + 486 hypothetical protein - none -
fig|6666666.65894.peg.1502 CDS gi|522808911|gb|ATVF01000004.1| 57906 58577 3 + 672 FIG00547576: hypothetical protein - none -
fig|6666666.65894.peg.1503 CDS gi|522808911|gb|ATVF01000004.1| 58665 60161 3 + 1497 Sulfate permease Cysteine Biosynthesis
fig|6666666.65894.peg.1504 CDS gi|522808911|gb|ATVF01000004.1| 60846 60235 -3 - 612 hypothetical protein - none -
fig|6666666.65894.peg.1505 CDS gi|522808911|gb|ATVF01000004.1| 61273 61094 -1 - 180 hypothetical membrane protein - none -
fig|6666666.65894.peg.1506 CDS gi|522808911|gb|ATVF01000004.1| 62014 61277 -1 - 738 Putative secreted protein - none -
fig|6666666.65894.peg.1507 CDS gi|522808911|gb|ATVF01000004.1| 62178 62011 -3 - 168 FIG00546737: hypothetical protein - none -
fig|6666666.65894.peg.1508 CDS gi|522808911|gb|ATVF01000004.1| 62548 62940 1 + 393 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65894.peg.1509 CDS gi|522808911|gb|ATVF01000004.1| 63868 63056 -1 - 813 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65894.peg.1510 CDS gi|522808911|gb|ATVF01000004.1| 65603 63924 -2 - 1680 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65894.peg.1511 CDS gi|522808911|gb|ATVF01000004.1| 66121 65600 -1 - 522 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65894.peg.1512 CDS gi|522808911|gb|ATVF01000004.1| 67581 66247 -3 - 1335 FIG00544398: hypothetical protein - none -
fig|6666666.65894.peg.1513 CDS gi|522808911|gb|ATVF01000004.1| 67630 68604 1 + 975 Cobalamin biosynthesis protein CobG - none -
fig|6666666.65894.peg.1514 CDS gi|522808911|gb|ATVF01000004.1| 69980 68616 -2 - 1365 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.65894.peg.1515 CDS gi|522808911|gb|ATVF01000004.1| 70756 70016 -1 - 741 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65894.peg.1516 CDS gi|522808911|gb|ATVF01000004.1| 71901 70753 -3 - 1149 probable metallopeptidase - none -
fig|6666666.65894.peg.1517 CDS gi|522808911|gb|ATVF01000004.1| 71931 72572 3 + 642 FIG00545318: hypothetical protein - none -
fig|6666666.65894.peg.1518 CDS gi|522808911|gb|ATVF01000004.1| 75394 72569 -1 - 2826 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65894.peg.1519 CDS gi|522808911|gb|ATVF01000004.1| 76423 75419 -1 - 1005 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65894.peg.1520 CDS gi|522808911|gb|ATVF01000004.1| 76905 76546 -3 - 360 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65894.peg.1521 CDS gi|522808911|gb|ATVF01000004.1| 77975 76992 -2 - 984 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65894.peg.1522 CDS gi|522808911|gb|ATVF01000004.1| 78952 77987 -1 - 966 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65894.peg.1523 CDS gi|522808911|gb|ATVF01000004.1| 80430 78964 -3 - 1467 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65894.peg.1524 CDS gi|522808911|gb|ATVF01000004.1| 80630 80436 -2 - 195 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65894.peg.1525 CDS gi|522808911|gb|ATVF01000004.1| 82424 80868 -2 - 1557 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65894.peg.1526 CDS gi|522808911|gb|ATVF01000004.1| 84140 82557 -2 - 1584 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65894.peg.1527 CDS gi|522808911|gb|ATVF01000004.1| 85016 84180 -2 - 837 RNA methyltransferase - none -
fig|6666666.65894.peg.1528 CDS gi|522808911|gb|ATVF01000004.1| 86325 85063 -3 - 1263 aspartyl aminopeptidase - none -
fig|6666666.65894.peg.1529 CDS gi|522808911|gb|ATVF01000004.1| 86396 87232 2 + 837 RecB family exonuclease - none -
fig|6666666.65894.peg.1530 CDS gi|522808911|gb|ATVF01000004.1| 87356 87601 2 + 246 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.65894.peg.1531 CDS gi|522808911|gb|ATVF01000004.1| 88874 87675 -2 - 1200 FIG00544406: hypothetical protein - none -
fig|6666666.65894.peg.1532 CDS gi|522808911|gb|ATVF01000004.1| 89017 89481 1 + 465 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.1533 CDS gi|522808911|gb|ATVF01000004.1| 91141 89582 -1 - 1560 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65894.peg.1534 CDS gi|522808911|gb|ATVF01000004.1| 92102 91257 -2 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1535 CDS gi|522808911|gb|ATVF01000004.1| 92381 92118 -2 - 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1536 CDS gi|522808911|gb|ATVF01000004.1| 93155 92460 -2 - 696 possible hydrolase - none -
fig|6666666.65894.peg.1537 CDS gi|522808911|gb|ATVF01000004.1| 96874 93209 -1 - 3666 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.65894.peg.1538 CDS gi|522808911|gb|ATVF01000004.1| 97097 97678 2 + 582 FIG00546048: hypothetical protein - none -
fig|6666666.65894.peg.1539 CDS gi|522808911|gb|ATVF01000004.1| 98133 97753 -3 - 381 FIG00543988: hypothetical protein - none -
fig|6666666.65894.peg.1540 CDS gi|522808911|gb|ATVF01000004.1| 99435 98158 -3 - 1278 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65894.peg.1541 CDS gi|522808911|gb|ATVF01000004.1| 100483 99602 -1 - 882 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65894.peg.1542 CDS gi|522808911|gb|ATVF01000004.1| 100527 101477 3 + 951 putative oxidoreductase - none -
fig|6666666.65894.peg.1543 CDS gi|522808911|gb|ATVF01000004.1| 101515 102552 1 + 1038 FIG00545923: hypothetical protein - none -
fig|6666666.65894.peg.1544 CDS gi|522808911|gb|ATVF01000004.1| 102569 103684 2 + 1116 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.65894.peg.1545 CDS gi|522808911|gb|ATVF01000004.1| 104216 103785 -2 - 432 FIG00543853: hypothetical protein - none -
fig|6666666.65894.peg.1546 CDS gi|522808911|gb|ATVF01000004.1| 104766 104233 -3 - 534 Phospholipid-binding protein - none -
fig|6666666.65894.peg.1547 CDS gi|522808911|gb|ATVF01000004.1| 105886 105326 -1 - 561 hypothetical protein - none -
fig|6666666.65894.peg.1548 CDS gi|522808911|gb|ATVF01000004.1| 105954 106565 3 + 612 FIG00544509: hypothetical protein - none -
fig|6666666.65894.peg.1549 CDS gi|522808911|gb|ATVF01000004.1| 106617 107381 3 + 765 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.65894.peg.1550 CDS gi|522808911|gb|ATVF01000004.1| 107462 108088 2 + 627 FIG00545282: hypothetical protein - none -
fig|6666666.65894.peg.1551 CDS gi|522808911|gb|ATVF01000004.1| 109370 108150 -2 - 1221 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65894.peg.1552 CDS gi|522808911|gb|ATVF01000004.1| 109855 109427 -1 - 429 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.65894.peg.1553 CDS gi|522808911|gb|ATVF01000004.1| 110746 109901 -1 - 846 FIG00544636: hypothetical protein - none -
fig|6666666.65894.peg.1554 CDS gi|522808911|gb|ATVF01000004.1| 110792 111568 2 + 777 FIG00546138: hypothetical protein - none -
fig|6666666.65894.peg.1555 CDS gi|522808911|gb|ATVF01000004.1| 112682 111573 -2 - 1110 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.1556 CDS gi|522808911|gb|ATVF01000004.1| 114674 112752 -2 - 1923 cell wall-associated hydrolase - none -
fig|6666666.65894.peg.1557 CDS gi|522808911|gb|ATVF01000004.1| 114742 114629 -1 - 114 hypothetical protein - none -
fig|6666666.65894.peg.1558 CDS gi|522808911|gb|ATVF01000004.1| 115687 115172 -1 - 516 FIG00545300: hypothetical protein - none -
fig|6666666.65894.peg.1559 CDS gi|522808911|gb|ATVF01000004.1| 116039 118867 2 + 2829 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
TCA Cycle
fig|6666666.65894.peg.1560 CDS gi|522808911|gb|ATVF01000004.1| 119049 119615 3 + 567 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.1561 CDS gi|522808911|gb|ATVF01000004.1| 119665 120411 1 + 747 GMP synthase - none -
fig|6666666.65894.peg.1562 CDS gi|522808911|gb|ATVF01000004.1| 121083 120415 -3 - 669 FIG00545571: hypothetical protein - none -
fig|6666666.65894.peg.1563 CDS gi|522808911|gb|ATVF01000004.1| 121359 121105 -3 - 255 hypothetical protein - none -
fig|6666666.65894.peg.1564 CDS gi|522808911|gb|ATVF01000004.1| 121415 121684 2 + 270 ACT domain protein - none -
fig|6666666.65894.peg.1565 CDS gi|522808911|gb|ATVF01000004.1| 121700 123088 2 + 1389 FIG00848225: hypothetical protein - none -
fig|6666666.65894.peg.1566 CDS gi|522808911|gb|ATVF01000004.1| 123627 123085 -3 - 543 hypothetical protein - none -
fig|6666666.65894.peg.1567 CDS gi|522808911|gb|ATVF01000004.1| 123917 124120 2 + 204 hypothetical protein - none -
fig|6666666.65894.peg.1568 CDS gi|522808911|gb|ATVF01000004.1| 124175 124348 2 + 174 hypothetical protein - none -
fig|6666666.65894.peg.1569 CDS gi|522808911|gb|ATVF01000004.1| 125429 124476 -2 - 954 hypothetical protein - none -
fig|6666666.65894.peg.1570 CDS gi|522808911|gb|ATVF01000004.1| 125818 125426 -1 - 393 hypothetical protein - none -
fig|6666666.65894.peg.1571 CDS gi|522808911|gb|ATVF01000004.1| 126807 125995 -3 - 813 hypothetical protein - none -
fig|6666666.65894.peg.1572 CDS gi|522808911|gb|ATVF01000004.1| 128152 127679 -1 - 474 hypothetical protein - none -
fig|6666666.65894.peg.1573 CDS gi|522808911|gb|ATVF01000004.1| 128765 128193 -2 - 573 hypothetical protein - none -
fig|6666666.65894.peg.1574 CDS gi|522808911|gb|ATVF01000004.1| 129130 128810 -1 - 321 Putative membrane protein - none -
fig|6666666.65894.peg.1575 CDS gi|522808911|gb|ATVF01000004.1| 129991 129134 -1 - 858 Phage endolysin Phage lysis modules
fig|6666666.65894.peg.1576 CDS gi|522808911|gb|ATVF01000004.1| 131971 130295 -1 - 1677 Hep_Hag - none -
fig|6666666.65894.peg.1577 CDS gi|522808911|gb|ATVF01000004.1| 132776 132456 -2 - 321 hypothetical protein - none -
fig|6666666.65894.peg.1578 CDS gi|522808911|gb|ATVF01000004.1| 133837 132995 -1 - 843 hypothetical protein - none -
fig|6666666.65894.peg.1579 CDS gi|522808911|gb|ATVF01000004.1| 133994 133827 -2 - 168 hypothetical protein - none -
fig|6666666.65894.peg.1580 CDS gi|522808911|gb|ATVF01000004.1| 135892 134243 -1 - 1650 Phage minor tail protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.65894.peg.1581 CDS gi|522808911|gb|ATVF01000004.1| 136029 135889 -3 - 141 hypothetical protein - none -
fig|6666666.65894.peg.1582 CDS gi|522808911|gb|ATVF01000004.1| 135985 136668 1 + 684 hypothetical protein - none -
fig|6666666.65894.peg.1583 CDS gi|522808911|gb|ATVF01000004.1| 141351 136756 -3 - 4596 hypothetical protein - none -
fig|6666666.65894.peg.1584 CDS gi|522808911|gb|ATVF01000004.1| 141712 141428 -1 - 285 hypothetical protein - none -
fig|6666666.65894.peg.1585 CDS gi|522808911|gb|ATVF01000004.1| 142290 141817 -3 - 474 hypothetical protein - none -
fig|6666666.65894.peg.1586 CDS gi|522808911|gb|ATVF01000004.1| 143073 142471 -3 - 603 Phage major tail protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.65894.peg.1587 CDS gi|522808911|gb|ATVF01000004.1| 143323 143120 -1 - 204 hypothetical protein - none -
fig|6666666.65894.peg.1588 CDS gi|522808911|gb|ATVF01000004.1| 143896 143690 -1 - 207 hypothetical protein - none -
fig|6666666.65894.peg.1589 CDS gi|522808911|gb|ATVF01000004.1| 144189 143893 -3 - 297 hypothetical protein - none -
fig|6666666.65894.peg.1590 CDS gi|522808911|gb|ATVF01000004.1| 144791 144582 -2 - 210 hypothetical protein - none -
fig|6666666.65894.peg.1591 CDS gi|522808911|gb|ATVF01000004.1| 145821 144793 -3 - 1029 Phage major capsid protein #Fam0021 Phage capsid proteins
fig|6666666.65894.peg.1592 CDS gi|522808911|gb|ATVF01000004.1| 146195 145824 -2 - 372 Phage capsid and scaffold Phage capsid proteins
fig|6666666.65894.peg.1593 CDS gi|522808911|gb|ATVF01000004.1| 146783 146196 -2 - 588 hypothetical protein - none -
fig|6666666.65894.peg.1594 CDS gi|522808911|gb|ATVF01000004.1| 147705 146899 -3 - 807 Phage protein - none -
fig|6666666.65894.peg.1595 CDS gi|522808911|gb|ATVF01000004.1| 148667 147708 -2 - 960 Phage capsid and scaffold Phage capsid proteins
fig|6666666.65894.peg.1596 CDS gi|522808911|gb|ATVF01000004.1| 148653 148997 3 + 345 hypothetical protein - none -
fig|6666666.65894.peg.1597 CDS gi|522808911|gb|ATVF01000004.1| 150937 149321 -1 - 1617 hypothetical protein - none -
fig|6666666.65894.peg.1598 CDS gi|522808911|gb|ATVF01000004.1| 151446 150961 -3 - 486 Phage protein - none -
fig|6666666.65894.peg.1599 CDS gi|522808911|gb|ATVF01000004.1| 152001 152423 3 + 423 hypothetical protein - none -
fig|6666666.65894.peg.1600 CDS gi|522808911|gb|ATVF01000004.1| 153141 152818 -3 - 324 hypothetical protein - none -
fig|6666666.65894.peg.1601 CDS gi|522808911|gb|ATVF01000004.1| 153578 153426 -2 - 153 hypothetical protein - none -
fig|6666666.65894.peg.1602 CDS gi|522808911|gb|ATVF01000004.1| 154933 153575 -1 - 1359 DNA helicase, phage-associated Phage replication
fig|6666666.65894.peg.1603 CDS gi|522808911|gb|ATVF01000004.1| 155102 154914 -2 - 189 Phage protein - none -
fig|6666666.65894.peg.1604 CDS gi|522808911|gb|ATVF01000004.1| 158012 155490 -2 - 2523 DNA primase, phage associated - none -
fig|6666666.65894.peg.1605 CDS gi|522808911|gb|ATVF01000004.1| 158735 158145 -2 - 591 Phage protein - none -
fig|6666666.65894.peg.1606 CDS gi|522808911|gb|ATVF01000004.1| 159064 158849 -1 - 216 hypothetical protein - none -
fig|6666666.65894.peg.1607 CDS gi|522808911|gb|ATVF01000004.1| 159427 159209 -1 - 219 hypothetical protein - none -
fig|6666666.65894.peg.1608 CDS gi|522808911|gb|ATVF01000004.1| 159663 159424 -3 - 240 hypothetical protein - none -
fig|6666666.65894.peg.1609 CDS gi|522808911|gb|ATVF01000004.1| 161317 159677 -1 - 1641 Phage protein - none -
fig|6666666.65894.peg.1610 CDS gi|522808911|gb|ATVF01000004.1| 161773 161333 -1 - 441 hypothetical protein - none -
fig|6666666.65894.peg.1611 CDS gi|522808911|gb|ATVF01000004.1| 161789 161929 2 + 141 hypothetical protein - none -
fig|6666666.65894.peg.1612 CDS gi|522808911|gb|ATVF01000004.1| 162084 161938 -3 - 147 hypothetical protein - none -
fig|6666666.65894.peg.1613 CDS gi|522808911|gb|ATVF01000004.1| 162259 162071 -1 - 189 hypothetical protein - none -
fig|6666666.65894.peg.1614 CDS gi|522808911|gb|ATVF01000004.1| 162455 162264 -2 - 192 hypothetical protein - none -
fig|6666666.65894.peg.1615 CDS gi|522808911|gb|ATVF01000004.1| 162769 162452 -1 - 318 hypothetical protein - none -
fig|6666666.65894.peg.1616 CDS gi|522808911|gb|ATVF01000004.1| 162941 162771 -2 - 171 hypothetical protein - none -
fig|6666666.65894.peg.1617 CDS gi|522808911|gb|ATVF01000004.1| 163368 163114 -3 - 255 hypothetical protein - none -
fig|6666666.65894.peg.1618 CDS gi|522808911|gb|ATVF01000004.1| 163601 163365 -2 - 237 hypothetical protein - none -
fig|6666666.65894.peg.1619 CDS gi|522808911|gb|ATVF01000004.1| 164015 163788 -2 - 228 hypothetical protein - none -
fig|6666666.65894.peg.1620 CDS gi|522808911|gb|ATVF01000004.1| 164304 164858 3 + 555 hypothetical protein - none -
fig|6666666.65894.peg.1621 CDS gi|522808911|gb|ATVF01000004.1| 165861 166229 3 + 369 hypothetical protein - none -
fig|6666666.65894.peg.1622 CDS gi|522808911|gb|ATVF01000004.1| 166606 167169 1 + 564 hypothetical protein - none -
fig|6666666.65894.peg.1623 CDS gi|522808911|gb|ATVF01000004.1| 167471 167617 2 + 147 hypothetical protein - none -
fig|6666666.65894.peg.1624 CDS gi|522808911|gb|ATVF01000004.1| 167822 168223 2 + 402 hypothetical protein - none -
fig|6666666.65894.peg.1625 CDS gi|522808911|gb|ATVF01000004.1| 168330 169568 3 + 1239 prophage Lp3 protein 1, integrase - none -
fig|6666666.65894.peg.1626 CDS gi|522808911|gb|ATVF01000004.1| 171203 169572 -2 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1627 CDS gi|522808911|gb|ATVF01000004.1| 171288 172079 3 + 792 hypothetical protein - none -
fig|6666666.65894.peg.1628 CDS gi|522808911|gb|ATVF01000004.1| 172576 172154 -1 - 423 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65894.peg.1629 CDS gi|522808911|gb|ATVF01000004.1| 173019 172573 -3 - 447 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65894.peg.1630 CDS gi|522808911|gb|ATVF01000004.1| 174284 173016 -2 - 1269 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.65894.peg.1631 CDS gi|522808911|gb|ATVF01000004.1| 175044 174286 -3 - 759 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65894.peg.1632 CDS gi|522808911|gb|ATVF01000004.1| 176316 175138 -3 - 1179 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65894.peg.1633 CDS gi|522808911|gb|ATVF01000004.1| 177767 176322 -2 - 1446 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65894.peg.1634 CDS gi|522808911|gb|ATVF01000004.1| 178469 177783 -2 - 687 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65894.peg.1635 CDS gi|522808911|gb|ATVF01000004.1| 178788 180524 3 + 1737 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65894.peg.1636 CDS gi|522808911|gb|ATVF01000004.1| 180531 181550 3 + 1020 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65894.peg.1637 CDS gi|522808911|gb|ATVF01000004.1| 181557 182372 3 + 816 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65894.peg.1638 CDS gi|522808911|gb|ATVF01000004.1| 182526 183536 3 + 1011 Cytochrome oxidase assembly protein - none -
fig|6666666.65894.peg.1639 CDS gi|522808911|gb|ATVF01000004.1| 183647 184615 2 + 969 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65894.peg.1640 CDS gi|522808911|gb|ATVF01000004.1| 185614 184682 -1 - 933 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65894.peg.1641 CDS gi|522808911|gb|ATVF01000004.1| 185817 185641 -3 - 177 hypothetical protein - none -
fig|6666666.65894.peg.1642 CDS gi|522808911|gb|ATVF01000004.1| 186306 188408 3 + 2103 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65894.peg.1643 CDS gi|522808911|gb|ATVF01000004.1| 188598 189680 3 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.65894.peg.1644 CDS gi|522808911|gb|ATVF01000004.1| 189801 191336 3 + 1536 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65894.peg.1645 CDS gi|522808911|gb|ATVF01000004.1| 191361 192320 3 + 960 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65894.peg.1646 CDS gi|522808911|gb|ATVF01000004.1| 192333 193043 3 + 711 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65894.peg.1647 CDS gi|522808911|gb|ATVF01000004.1| 194354 193212 -2 - 1143 sarcosine oxidase( EC:1.5.3.1 ) - none -
fig|6666666.65894.peg.1648 CDS gi|522808911|gb|ATVF01000004.1| 195644 194496 -2 - 1149 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65894.peg.1649 CDS gi|522808911|gb|ATVF01000004.1| 196958 195648 -2 - 1311 Ammonium transporter Ammonia assimilation
fig|6666666.65894.peg.1650 CDS gi|522808911|gb|ATVF01000004.1| 197456 197223 -2 - 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65894.peg.1651 CDS gi|522808911|gb|ATVF01000004.1| 200286 197527 -3 - 2760 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65894.peg.1652 CDS gi|522808911|gb|ATVF01000004.1| 201327 200548 -3 - 780 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65894.peg.1653 CDS gi|522808911|gb|ATVF01000004.1| 202737 201520 -3 - 1218 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65894.peg.1654 CDS gi|522808911|gb|ATVF01000004.1| 203970 202966 -3 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65894.peg.1655 CDS gi|522808911|gb|ATVF01000004.1| 205462 204479 -1 - 984 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65894.peg.1656 CDS gi|522808911|gb|ATVF01000004.1| 206765 205662 -2 - 1104 Hypothetical protein UPF0052 - none -
fig|6666666.65894.peg.1657 CDS gi|522808911|gb|ATVF01000004.1| 207713 206784 -2 - 930 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.65894.peg.1658 CDS gi|522808911|gb|ATVF01000004.1| 209831 207765 -2 - 2067 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65894.peg.1659 CDS gi|522808911|gb|ATVF01000004.1| 210401 209838 -2 - 564 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65894.peg.1660 CDS gi|522808911|gb|ATVF01000004.1| 210935 210456 -2 - 480 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1661 CDS gi|522808911|gb|ATVF01000004.1| 212209 210938 -1 - 1272 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65894.peg.1662 CDS gi|522808911|gb|ATVF01000004.1| 212835 212221 -3 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65894.peg.1663 CDS gi|522808911|gb|ATVF01000004.1| 213836 212838 -2 - 999 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1664 CDS gi|522808911|gb|ATVF01000004.1| 214499 213837 -2 - 663 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1665 CDS gi|522808911|gb|ATVF01000004.1| 216103 214556 -1 - 1548 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.65894.peg.1666 CDS gi|522808911|gb|ATVF01000004.1| 217038 216100 -3 - 939 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.65894.peg.1667 CDS gi|522808911|gb|ATVF01000004.1| 217567 217100 -1 - 468 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65894.peg.1668 CDS gi|522808911|gb|ATVF01000004.1| 219847 217790 -1 - 2058 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65894.peg.1669 CDS gi|522808911|gb|ATVF01000004.1| 221097 219874 -3 - 1224 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis
fig|6666666.65894.peg.1670 CDS gi|522808911|gb|ATVF01000004.1| 222436 221189 -1 - 1248 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65894.peg.1671 CDS gi|522808911|gb|ATVF01000004.1| 222904 222626 -1 - 279 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65894.peg.1672 CDS gi|522808911|gb|ATVF01000004.1| 223506 223003 -3 - 504 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65894.peg.1673 CDS gi|522808911|gb|ATVF01000004.1| 223902 223582 -3 - 321 integration host factor - none -
fig|6666666.65894.peg.1674 CDS gi|522808911|gb|ATVF01000004.1| 224943 224107 -3 - 837 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1675 CDS gi|522808911|gb|ATVF01000004.1| 228289 224948 -1 - 3342 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65894.peg.1676 CDS gi|522808911|gb|ATVF01000004.1| 229482 228295 -3 - 1188 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65894.peg.1677 CDS gi|522808911|gb|ATVF01000004.1| 230996 229623 -2 - 1374 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis;
Zinc regulated enzymes
fig|6666666.65894.peg.1678 CDS gi|522808911|gb|ATVF01000004.1| 232026 231088 -3 - 939 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.65894.peg.1679 CDS gi|522808911|gb|ATVF01000004.1| 232602 232027 -3 - 576 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.65894.peg.1680 CDS gi|522808911|gb|ATVF01000004.1| 232981 232865 -1 - 117 hypothetical protein - none -
fig|6666666.65894.peg.1681 CDS gi|522808911|gb|ATVF01000004.1| 232961 234478 2 + 1518 Cell division inhibitor Persister Cells
fig|6666666.65894.peg.1682 CDS gi|522808911|gb|ATVF01000004.1| 234542 235012 2 + 471 FIG00544983: hypothetical protein - none -
fig|6666666.65894.peg.1683 CDS gi|522808911|gb|ATVF01000004.1| 235002 235451 3 + 450 FIG00546283: hypothetical protein - none -
fig|6666666.65894.peg.1684 CDS gi|522808911|gb|ATVF01000004.1| 236110 235517 -1 - 594 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65894.peg.1685 CDS gi|522808911|gb|ATVF01000004.1| 236763 236200 -3 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65894.peg.1686 CDS gi|522808911|gb|ATVF01000004.1| 237950 236859 -2 - 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65894.peg.1687 CDS gi|522808911|gb|ATVF01000004.1| 239080 237980 -1 - 1101 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.1688 CDS gi|522808911|gb|ATVF01000004.1| 239760 239158 -3 - 603 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.1689 CDS gi|522808911|gb|ATVF01000004.1| 240973 239750 -1 - 1224 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.1690 CDS gi|522808911|gb|ATVF01000004.1| 241296 241018 -3 - 279 signal peptidase - none -
fig|6666666.65894.peg.1691 CDS gi|522808911|gb|ATVF01000004.1| 241801 241493 -1 - 309 putative mercury resistance operon regulator MerR - none -
fig|6666666.65894.peg.1692 CDS gi|522808911|gb|ATVF01000004.1| 241855 242934 1 + 1080 ABC transporter (iron.B12.siderophore.hemin) , permease component - none -
fig|6666666.65894.peg.1693 CDS gi|522808911|gb|ATVF01000004.1| 242956 243915 1 + 960 ABC-type transporter, periplasmic component - none -
fig|6666666.65894.peg.1694 CDS gi|522808911|gb|ATVF01000004.1| 243912 244667 3 + 756 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1695 CDS gi|522808911|gb|ATVF01000004.1| 245480 244644 -2 - 837 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.1696 CDS gi|522808911|gb|ATVF01000004.1| 246690 245521 -3 - 1170 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65894.peg.1697 CDS gi|522808911|gb|ATVF01000004.1| 247259 246687 -2 - 573 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65894.peg.1698 CDS gi|522808911|gb|ATVF01000004.1| 250280 247614 -2 - 2667 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65894.peg.1699 CDS gi|522808911|gb|ATVF01000004.1| 251789 250395 -2 - 1395 ATPase, AAA family - none -
fig|6666666.65894.peg.1700 CDS gi|522808912|gb|ATVF01000003.1| 1285 1398 1 + 114 hypothetical protein - none -
fig|6666666.65894.peg.1701 CDS gi|522808912|gb|ATVF01000003.1| 2753 1554 -2 - 1200 FIG00544116: hypothetical protein - none -
fig|6666666.65894.peg.1702 CDS gi|522808912|gb|ATVF01000003.1| 4706 2910 -2 - 1797 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65894.peg.1703 CDS gi|522808912|gb|ATVF01000003.1| 5009 5896 2 + 888 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65894.peg.1704 CDS gi|522808912|gb|ATVF01000003.1| 5948 6910 2 + 963 monooxygenase, putative - none -
fig|6666666.65894.peg.1705 CDS gi|522808912|gb|ATVF01000003.1| 9545 6903 -2 - 2643 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.65894.peg.1706 CDS gi|522808912|gb|ATVF01000003.1| 11470 9611 -1 - 1860 Putative membrane protein - none -
fig|6666666.65894.peg.1707 CDS gi|522808912|gb|ATVF01000003.1| 12147 11470 -3 - 678 No significant database matches - none -
fig|6666666.65894.peg.1708 CDS gi|522808912|gb|ATVF01000003.1| 12262 12834 1 + 573 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.1709 CDS gi|522808912|gb|ATVF01000003.1| 12859 13575 1 + 717 Putative CBS domain containing protein - none -
fig|6666666.65894.peg.1710 CDS gi|522808912|gb|ATVF01000003.1| 13680 14801 3 + 1122 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.65894.peg.1711 CDS gi|522808912|gb|ATVF01000003.1| 14811 15497 3 + 687 FMN reductase (EC 1.5.1.29) Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.65894.peg.1712 CDS gi|522808912|gb|ATVF01000003.1| 15666 17015 3 + 1350 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65894.peg.1713 CDS gi|522808912|gb|ATVF01000003.1| 18345 17056 -3 - 1290 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65894.peg.1714 CDS gi|522808912|gb|ATVF01000003.1| 19044 18397 -3 - 648 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.65894.peg.1715 CDS gi|522808912|gb|ATVF01000003.1| 19202 20047 2 + 846 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65894.peg.1716 CDS gi|522808912|gb|ATVF01000003.1| 20487 20834 3 + 348 hypothetical protein - none -
fig|6666666.65894.peg.1717 CDS gi|522808912|gb|ATVF01000003.1| 23130 20953 -3 - 2178 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65894.peg.1718 CDS gi|522808912|gb|ATVF01000003.1| 23817 23260 -3 - 558 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65894.peg.1719 CDS gi|522808912|gb|ATVF01000003.1| 25374 23821 -3 - 1554 hypothetical protein - none -
fig|6666666.65894.peg.1720 CDS gi|522808912|gb|ATVF01000003.1| 26749 25544 -1 - 1206 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65894.peg.1721 CDS gi|522808912|gb|ATVF01000003.1| 28773 26755 -3 - 2019 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65894.peg.1722 CDS gi|522808912|gb|ATVF01000003.1| 29385 29035 -3 - 351 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.65894.peg.1723 CDS gi|522808912|gb|ATVF01000003.1| 30537 29446 -3 - 1092 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65894.peg.1724 CDS gi|522808912|gb|ATVF01000003.1| 31172 30552 -2 - 621 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65894.peg.1725 CDS gi|522808912|gb|ATVF01000003.1| 31840 31232 -1 - 609 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65894.peg.1726 CDS gi|522808912|gb|ATVF01000003.1| 32747 31992 -2 - 756 FIG000859: hypothetical protein YebC CBSS-1806.1.peg.1285;
Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.65894.peg.1727 CDS gi|522808912|gb|ATVF01000003.1| 33865 32996 -1 - 870 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II;
CBSS-1806.1.peg.1285
fig|6666666.65894.peg.1728 CDS gi|522808912|gb|ATVF01000003.1| 33992 34468 2 + 477 FIG00546244: hypothetical protein - none -
fig|6666666.65894.peg.1729 CDS gi|522808912|gb|ATVF01000003.1| 34968 34507 -3 - 462 FIG053954: Probable conserved membrane protein CBSS-1806.1.peg.1285
fig|6666666.65894.peg.1730 CDS gi|522808912|gb|ATVF01000003.1| 36062 34968 -2 - 1095 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) CBSS-1806.1.peg.1285
fig|6666666.65894.peg.1731 CDS gi|522808912|gb|ATVF01000003.1| 37001 36078 -2 - 924 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) CBSS-1806.1.peg.1285
fig|6666666.65894.peg.1732 CDS gi|522808912|gb|ATVF01000003.1| 37700 37032 -2 - 669 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.1733 CDS gi|522808912|gb|ATVF01000003.1| 38377 37700 -1 - 678 FIG049476: HIT family protein CBSS-1806.1.peg.1285
fig|6666666.65894.peg.1734 CDS gi|522808912|gb|ATVF01000003.1| 40421 38361 -2 - 2061 Threonyl-tRNA synthetase (EC 6.1.1.3) CBSS-1806.1.peg.1285;
tRNA aminoacylation, Thr
fig|6666666.65894.peg.1735 CDS gi|522808912|gb|ATVF01000003.1| 40498 40617 1 + 120 hypothetical protein - none -
fig|6666666.65894.peg.1736 CDS gi|522808912|gb|ATVF01000003.1| 41897 40674 -2 - 1224 Dyp-type peroxidase family protein - none -
fig|6666666.65894.peg.1737 CDS gi|522808912|gb|ATVF01000003.1| 42490 41912 -1 - 579 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65894.peg.1738 CDS gi|522808912|gb|ATVF01000003.1| 43137 42502 -3 - 636 FIG00543909: hypothetical protein - none -
fig|6666666.65894.peg.1739 CDS gi|522808912|gb|ATVF01000003.1| 44416 45111 1 + 696 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.65894.peg.1740 CDS gi|522808912|gb|ATVF01000003.1| 45162 46454 3 + 1293 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65894.peg.1741 CDS gi|522808912|gb|ATVF01000003.1| 46499 46912 2 + 414 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65894.peg.1742 CDS gi|522808912|gb|ATVF01000003.1| 47689 46988 -1 - 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.1743 CDS gi|522808912|gb|ATVF01000003.1| 48418 48972 1 + 555 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65894.peg.1744 CDS gi|522808912|gb|ATVF01000003.1| 48983 50194 2 + 1212 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.65894.peg.1745 CDS gi|522808912|gb|ATVF01000003.1| 52192 50279 -1 - 1914 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65894.peg.1746 CDS gi|522808912|gb|ATVF01000003.1| 53617 52379 -1 - 1239 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.65894.peg.1747 CDS gi|522808912|gb|ATVF01000003.1| 54655 53828 -1 - 828 FIG00545882: hypothetical protein - none -
fig|6666666.65894.peg.1748 CDS gi|522808912|gb|ATVF01000003.1| 55267 54800 -1 - 468 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65894.peg.1749 CDS gi|522808912|gb|ATVF01000003.1| 55421 55972 2 + 552 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65894.peg.1750 CDS gi|522808912|gb|ATVF01000003.1| 56462 56169 -2 - 294 FIG00545109: hypothetical protein - none -
fig|6666666.65894.peg.1751 CDS gi|522808912|gb|ATVF01000003.1| 57488 56628 -2 - 861 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.65894.peg.1752 CDS gi|522808912|gb|ATVF01000003.1| 57576 58328 3 + 753 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65894.peg.1753 CDS gi|522808912|gb|ATVF01000003.1| 58831 60336 1 + 1506 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65894.peg.1754 CDS gi|522808912|gb|ATVF01000003.1| 61693 60404 -1 - 1290 FIG00544571: hypothetical protein - none -
fig|6666666.65894.peg.1755 CDS gi|522808912|gb|ATVF01000003.1| 62300 61764 -2 - 537 FIG00545427: hypothetical protein - none -
fig|6666666.65894.peg.1756 CDS gi|522808912|gb|ATVF01000003.1| 64112 62400 -2 - 1713 DNA or RNA helicases of superfamily II - none -
fig|6666666.65894.peg.1757 CDS gi|522808912|gb|ATVF01000003.1| 64243 64109 -1 - 135 FIG00544358: hypothetical protein - none -
fig|6666666.65894.peg.1758 CDS gi|522808912|gb|ATVF01000003.1| 64406 64894 2 + 489 FIG00545207: hypothetical protein - none -
fig|6666666.65894.peg.1759 CDS gi|522808912|gb|ATVF01000003.1| 64901 66436 2 + 1536 Putative transferase - none -
fig|6666666.65894.peg.1760 CDS gi|522808912|gb|ATVF01000003.1| 66440 66874 2 + 435 D-tyrosyl-tRNA(Tyr) deacylase CBSS-342610.3.peg.283;
D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65894.peg.1761 CDS gi|522808912|gb|ATVF01000003.1| 67052 68047 2 + 996 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65894.peg.1762 CDS gi|522808912|gb|ATVF01000003.1| 68410 69096 1 + 687 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65894.peg.1763 CDS gi|522808912|gb|ATVF01000003.1| 69102 70088 3 + 987 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.65894.peg.1764 CDS gi|522808912|gb|ATVF01000003.1| 71287 70094 -1 - 1194 FIG00544535: hypothetical protein - none -
fig|6666666.65894.peg.1765 CDS gi|522808912|gb|ATVF01000003.1| 71730 72686 3 + 957 FIG00544614: hypothetical protein - none -
fig|6666666.65894.peg.1766 CDS gi|522808912|gb|ATVF01000003.1| 73636 76176 1 + 2541 putative helicase - none -
fig|6666666.65894.peg.1767 CDS gi|522808912|gb|ATVF01000003.1| 76353 77342 3 + 990 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65894.peg.1768 CDS gi|522808912|gb|ATVF01000003.1| 78641 77496 -2 - 1146 FIG00544563: hypothetical protein - none -
fig|6666666.65894.peg.1769 CDS gi|522808912|gb|ATVF01000003.1| 78797 82705 2 + 3909 ATP-dependent helicase HrpA - none -
fig|6666666.65894.peg.1770 CDS gi|522808912|gb|ATVF01000003.1| 83107 82799 -1 - 309 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.65894.peg.1771 CDS gi|522808912|gb|ATVF01000003.1| 83514 83341 -3 - 174 hypothetical protein - none -
fig|6666666.65894.peg.1772 CDS gi|522808912|gb|ATVF01000003.1| 84099 84857 3 + 759 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65894.peg.1773 CDS gi|522808912|gb|ATVF01000003.1| 85183 85962 1 + 780 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65894.peg.1774 CDS gi|522808912|gb|ATVF01000003.1| 85959 86924 3 + 966 Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65894.peg.1775 CDS gi|522808912|gb|ATVF01000003.1| 88720 87020 -1 - 1701 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.65894.peg.1776 CDS gi|522808912|gb|ATVF01000003.1| 89135 89908 2 + 774 transcriptional regulator of sugar metabolism - none -
fig|6666666.65894.peg.1777 CDS gi|522808912|gb|ATVF01000003.1| 89905 90897 1 + 993 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65894.peg.1778 CDS gi|522808912|gb|ATVF01000003.1| 90927 92942 3 + 2016 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.65894.peg.1779 CDS gi|522808912|gb|ATVF01000003.1| 93108 93377 3 + 270 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization
fig|6666666.65894.peg.1780 CDS gi|522808912|gb|ATVF01000003.1| 94096 93572 -1 - 525 FIG00546412: hypothetical protein - none -
fig|6666666.65894.peg.1781 CDS gi|522808912|gb|ATVF01000003.1| 95335 94163 -1 - 1173 xanthine/uracil permeases - none -
fig|6666666.65894.peg.1782 CDS gi|522808912|gb|ATVF01000003.1| 97049 95523 -2 - 1527 GTP-binding protein HflX Hfl operon
fig|6666666.65894.peg.1783 CDS gi|522808912|gb|ATVF01000003.1| 97263 97985 3 + 723 FIG00546075: hypothetical protein - none -
fig|6666666.65894.peg.1784 CDS gi|522808912|gb|ATVF01000003.1| 98893 98060 -1 - 834 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.1785 CDS gi|522808912|gb|ATVF01000003.1| 99807 98899 -3 - 909 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA processing
fig|6666666.65894.peg.1786 CDS gi|522808912|gb|ATVF01000003.1| 100440 99808 -3 - 633 FIG00545147: hypothetical protein - none -
fig|6666666.65894.peg.1787 CDS gi|522808912|gb|ATVF01000003.1| 100615 101967 1 + 1353 ATPase involved in DNA repair - none -
fig|6666666.65894.peg.1788 CDS gi|522808912|gb|ATVF01000003.1| 101968 103008 1 + 1041 No significant database matches - none -
fig|6666666.65894.peg.1789 CDS gi|522808912|gb|ATVF01000003.1| 103655 103005 -2 - 651 FIG00544570: hypothetical protein - none -
fig|6666666.65894.peg.1790 CDS gi|522808912|gb|ATVF01000003.1| 105355 103736 -1 - 1620 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.65894.peg.1791 CDS gi|522808912|gb|ATVF01000003.1| 105686 106402 2 + 717 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.65894.peg.1792 CDS gi|522808912|gb|ATVF01000003.1| 106434 107327 3 + 894 glutamate-binding protein GluB - none -
fig|6666666.65894.peg.1793 CDS gi|522808912|gb|ATVF01000003.1| 107443 108129 1 + 687 glutamate ABC-type transporter, permease component - none -
fig|6666666.65894.peg.1794 CDS gi|522808912|gb|ATVF01000003.1| 108129 109076 3 + 948 glutamate transporter permease protein GluD - none -
fig|6666666.65894.peg.1795 CDS gi|522808912|gb|ATVF01000003.1| 109762 109148 -1 - 615 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65894.peg.1796 CDS gi|522808912|gb|ATVF01000003.1| 110973 109861 -3 - 1113 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65894.peg.1797 CDS gi|522808912|gb|ATVF01000003.1| 111451 111224 -1 - 228 hypothetical protein - none -
fig|6666666.65894.peg.1798 CDS gi|522808912|gb|ATVF01000003.1| 111553 112164 1 + 612 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65894.peg.1799 CDS gi|522808912|gb|ATVF01000003.1| 112266 112958 3 + 693 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65894.peg.1800 CDS gi|522808912|gb|ATVF01000003.1| 112955 113566 2 + 612 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65894.peg.1801 CDS gi|522808912|gb|ATVF01000003.1| 114487 113657 -1 - 831 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65894.peg.1802 CDS gi|522808912|gb|ATVF01000003.1| 115013 114690 -2 - 324 putative transcription regulator - none -
fig|6666666.65894.peg.1803 CDS gi|522808912|gb|ATVF01000003.1| 115649 115071 -2 - 579 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.65894.peg.1804 CDS gi|522808912|gb|ATVF01000003.1| 116298 115660 -3 - 639 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.1805 CDS gi|522808912|gb|ATVF01000003.1| 116599 116892 1 + 294 FIG00544062: hypothetical protein - none -
fig|6666666.65894.peg.1806 CDS gi|522808912|gb|ATVF01000003.1| 118092 116986 -3 - 1107 Integral membrane protein TerC - none -
fig|6666666.65894.peg.1807 CDS gi|522808912|gb|ATVF01000003.1| 121362 118471 -3 - 2892 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65894.peg.1808 CDS gi|522808912|gb|ATVF01000003.1| 122207 121572 -2 - 636 FIG00544433: hypothetical protein - none -
fig|6666666.65894.peg.1809 CDS gi|522808912|gb|ATVF01000003.1| 124523 122331 -2 - 2193 Ribonuclease J2 (endoribonuclease in RNA processing) Ribonucleases in Bacillus
fig|6666666.65894.peg.1810 CDS gi|522808912|gb|ATVF01000003.1| 125500 124526 -1 - 975 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65894.peg.1811 CDS gi|522808912|gb|ATVF01000003.1| 126527 125775 -2 - 753 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65894.peg.1812 CDS gi|522808912|gb|ATVF01000003.1| 127379 126633 -2 - 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65894.peg.1813 CDS gi|522808912|gb|ATVF01000003.1| 127585 128262 1 + 678 hypothetical protein - none -
fig|6666666.65894.peg.1814 CDS gi|522808912|gb|ATVF01000003.1| 130587 128326 -3 - 2262 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65894.peg.1815 CDS gi|522808912|gb|ATVF01000003.1| 131078 130809 -2 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.65894.peg.1816 CDS gi|522808912|gb|ATVF01000003.1| 132161 131211 -2 - 951 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.1817 CDS gi|522808912|gb|ATVF01000003.1| 133226 132201 -2 - 1026 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65894.peg.1818 CDS gi|522808912|gb|ATVF01000003.1| 133258 134151 1 + 894 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.65894.peg.1819 CDS gi|522808912|gb|ATVF01000003.1| 134815 134159 -1 - 657 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.65894.peg.1820 CDS gi|522808912|gb|ATVF01000003.1| 135611 134805 -2 - 807 putative SimX4 homolog - none -
fig|6666666.65894.peg.1821 CDS gi|522808912|gb|ATVF01000003.1| 137021 135723 -2 - 1299 putative DNA-damage-inducible protein F - none -
fig|6666666.65894.peg.1822 CDS gi|522808912|gb|ATVF01000003.1| 138022 137024 -1 - 999 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.65894.peg.1823 CDS gi|522808912|gb|ATVF01000003.1| 138477 138028 -3 - 450 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65894.peg.1824 CDS gi|522808912|gb|ATVF01000003.1| 141696 138718 -3 - 2979 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65894.peg.1825 CDS gi|522808912|gb|ATVF01000003.1| 142158 141808 -3 - 351 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65894.peg.1826 CDS gi|522808912|gb|ATVF01000003.1| 143347 142346 -1 - 1002 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65894.peg.1827 CDS gi|522808912|gb|ATVF01000003.1| 143915 143379 -2 - 537 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65894.peg.1828 CDS gi|522808912|gb|ATVF01000003.1| 143969 144784 2 + 816 hypothetical protein - none -
fig|6666666.65894.peg.1829 CDS gi|522808912|gb|ATVF01000003.1| 145148 146743 2 + 1596 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.65894.peg.1830 CDS gi|522808912|gb|ATVF01000003.1| 146924 147850 2 + 927 ABC-type transporter, permease component - none -
fig|6666666.65894.peg.1831 CDS gi|522808912|gb|ATVF01000003.1| 147843 148889 3 + 1047 ABC-type transporter, permease component - none -
fig|6666666.65894.peg.1832 CDS gi|522808912|gb|ATVF01000003.1| 148886 150619 2 + 1734 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1833 CDS gi|522808912|gb|ATVF01000003.1| 152538 150772 -3 - 1767 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65894.peg.1834 CDS gi|522808912|gb|ATVF01000003.1| 152630 153367 2 + 738 UPF0246 protein YaaA - none -
fig|6666666.65894.peg.1835 CDS gi|522808912|gb|ATVF01000003.1| 154110 153364 -3 - 747 ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.65894.peg.1836 CDS gi|522808912|gb|ATVF01000003.1| 155236 154130 -1 - 1107 ChlI component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.65894.peg.1837 CDS gi|522808912|gb|ATVF01000003.1| 156171 155416 -3 - 756 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.65894.peg.1838 CDS gi|522808912|gb|ATVF01000003.1| 156213 157661 3 + 1449 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.65894.peg.1839 CDS gi|522808912|gb|ATVF01000003.1| 158163 157930 -3 - 234 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.65894.peg.1840 CDS gi|522808912|gb|ATVF01000003.1| 158437 158321 -1 - 117 hypothetical protein - none -
fig|6666666.65894.peg.1841 CDS gi|522808912|gb|ATVF01000003.1| 158644 158459 -1 - 186 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.65894.peg.1842 CDS gi|522808912|gb|ATVF01000003.1| 160293 158794 -3 - 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65894.peg.1843 CDS gi|522808912|gb|ATVF01000003.1| 160581 161801 3 + 1221 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65894.peg.1844 CDS gi|522808912|gb|ATVF01000003.1| 161859 163256 3 + 1398 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65894.peg.1845 CDS gi|522808912|gb|ATVF01000003.1| 163670 164008 2 + 339 FIG00544201: hypothetical protein - none -
fig|6666666.65894.peg.1846 CDS gi|522808912|gb|ATVF01000003.1| 164055 164411 3 + 357 FIG00544201: hypothetical protein - none -
fig|6666666.65894.peg.1847 CDS gi|522808912|gb|ATVF01000003.1| 164630 165784 2 + 1155 protein of unknown function DUF222 - none -
fig|6666666.65894.peg.1848 CDS gi|522808912|gb|ATVF01000003.1| 166761 165877 -3 - 885 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65894.peg.1849 CDS gi|522808912|gb|ATVF01000003.1| 168669 166801 -3 - 1869 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1850 CDS gi|522808912|gb|ATVF01000003.1| 169357 168725 -1 - 633 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65894.peg.1851 CDS gi|522808912|gb|ATVF01000003.1| 170483 169350 -2 - 1134 two-component system, sensor protein - none -
fig|6666666.65894.peg.1852 CDS gi|522808912|gb|ATVF01000003.1| 170593 171567 1 + 975 ABC-type transporter, permease component - none -
fig|6666666.65894.peg.1853 CDS gi|522808912|gb|ATVF01000003.1| 171620 172345 2 + 726 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.65894.peg.1854 CDS gi|522808912|gb|ATVF01000003.1| 173516 172335 -2 - 1182 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65894.peg.1855 CDS gi|522808912|gb|ATVF01000003.1| 174871 173657 -1 - 1215 Membrane-associated zinc metalloprotease - none -
fig|6666666.65894.peg.1856 CDS gi|522808912|gb|ATVF01000003.1| 176066 174894 -2 - 1173 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65894.peg.1857 CDS gi|522808912|gb|ATVF01000003.1| 176270 176719 2 + 450 hypothetical membrane protein - none -
fig|6666666.65894.peg.1858 CDS gi|522808912|gb|ATVF01000003.1| 178359 176776 -3 - 1584 FIG00546336: hypothetical protein - none -
fig|6666666.65894.peg.1859 CDS gi|522808912|gb|ATVF01000003.1| 179189 178359 -2 - 831 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65894.peg.1860 CDS gi|522808912|gb|ATVF01000003.1| 180457 179348 -1 - 1110 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.65894.peg.1861 CDS gi|522808912|gb|ATVF01000003.1| 180565 181005 1 + 441 FIG00544474: hypothetical protein - none -
fig|6666666.65894.peg.1862 CDS gi|522808912|gb|ATVF01000003.1| 182021 181128 -2 - 894 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.1863 CDS gi|522808912|gb|ATVF01000003.1| 182730 182173 -3 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65894.peg.1864 CDS gi|522808912|gb|ATVF01000003.1| 183531 182800 -3 - 732 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65894.peg.1865 CDS gi|522808912|gb|ATVF01000003.1| 184688 183861 -2 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65894.peg.1866 CDS gi|522808912|gb|ATVF01000003.1| 185702 184911 -2 - 792 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.65894.peg.1867 CDS gi|522808912|gb|ATVF01000003.1| 186214 186576 1 + 363 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.65894.peg.1868 CDS gi|522808912|gb|ATVF01000003.1| 187525 186578 -1 - 948 Tyrosine recombinase XerC - none -
fig|6666666.65894.peg.1869 CDS gi|522808912|gb|ATVF01000003.1| 188878 187691 -1 - 1188 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65894.peg.1870 CDS gi|522808912|gb|ATVF01000003.1| 190401 188878 -3 - 1524 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65894.peg.1871 CDS gi|522808912|gb|ATVF01000003.1| 190756 190388 -1 - 369 hypothetical protein - none -
fig|6666666.65894.peg.1872 CDS gi|522808912|gb|ATVF01000003.1| 191232 190927 -3 - 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65894.peg.1873 CDS gi|522808912|gb|ATVF01000003.1| 191897 191229 -2 - 669 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H;
Ribonucleases in Bacillus
fig|6666666.65894.peg.1874 CDS gi|522808912|gb|ATVF01000003.1| 192728 191925 -2 - 804 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65894.peg.1875 CDS gi|522808912|gb|ATVF01000003.1| 193604 192876 -2 - 729 Serine protease, DegP/HtrA, do-like (EC 3.4.21.-) - none -
fig|6666666.65894.peg.1876 CDS gi|522808912|gb|ATVF01000003.1| 194443 193601 -1 - 843 Serine protease, DegP/HtrA, do-like (EC 3.4.21.-) - none -
fig|6666666.65894.peg.1877 CDS gi|522808912|gb|ATVF01000003.1| 194748 195668 3 + 921 ABC-type transport systems, periplasmic component - none -
fig|6666666.65894.peg.1878 CDS gi|522808912|gb|ATVF01000003.1| 196171 195830 -1 - 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65894.peg.1879 CDS gi|522808912|gb|ATVF01000003.1| 196507 197184 1 + 678 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65894.peg.1880 CDS gi|522808912|gb|ATVF01000003.1| 197181 198326 3 + 1146 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65894.peg.1881 CDS gi|522808912|gb|ATVF01000003.1| 198323 198520 2 + 198 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.65894.peg.1882 CDS gi|522808912|gb|ATVF01000003.1| 198522 199304 3 + 783 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65894.peg.1883 CDS gi|522808912|gb|ATVF01000003.1| 199305 200384 3 + 1080 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65894.peg.1884 CDS gi|522808912|gb|ATVF01000003.1| 202725 200461 -3 - 2265 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65894.peg.1885 CDS gi|522808912|gb|ATVF01000003.1| 203134 202763 -1 - 372 FIG00545499: hypothetical protein - none -
fig|6666666.65894.peg.1886 CDS gi|522808912|gb|ATVF01000003.1| 203846 203145 -2 - 702 FIG00545875: hypothetical protein - none -
fig|6666666.65894.peg.1887 CDS gi|522808912|gb|ATVF01000003.1| 204758 203847 -2 - 912 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.65894.peg.1888 CDS gi|522808912|gb|ATVF01000003.1| 205314 204799 -3 - 516 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.65894.peg.1889 CDS gi|522808912|gb|ATVF01000003.1| 205992 205486 -3 - 507 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.65894.peg.1890 CDS gi|522808912|gb|ATVF01000003.1| 206328 206768 3 + 441 putative ankyrin repeat-containing protein - none -
fig|6666666.65894.peg.1891 CDS gi|522808912|gb|ATVF01000003.1| 208452 206836 -3 - 1617 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65894.peg.1892 CDS gi|522808912|gb|ATVF01000003.1| 210609 208531 -3 - 2079 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.65894.peg.1893 CDS gi|522808912|gb|ATVF01000003.1| 210972 210634 -3 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.65894.peg.1894 CDS gi|522808912|gb|ATVF01000003.1| 212335 211019 -1 - 1317 Ammonium transporter Ammonia assimilation
fig|6666666.65894.peg.1895 CDS gi|522808912|gb|ATVF01000003.1| 214504 212771 -1 - 1734 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65894.peg.1896 CDS gi|522808912|gb|ATVF01000003.1| 214609 214728 1 + 120 hypothetical protein - none -
fig|6666666.65894.peg.1897 CDS gi|522808912|gb|ATVF01000003.1| 218112 214738 -3 - 3375 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.65894.peg.1898 CDS gi|522808912|gb|ATVF01000003.1| 221714 218253 -2 - 3462 Chromosome partition protein smc - none -
fig|6666666.65894.peg.1899 CDS gi|522808912|gb|ATVF01000003.1| 222013 221729 -1 - 285 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.1900 CDS gi|522808912|gb|ATVF01000003.1| 223882 222050 -1 - 1833 hypothetical protein - none -
fig|6666666.65894.peg.1901 CDS gi|522808912|gb|ATVF01000003.1| 225562 224090 -1 - 1473 amino acid carrier protein - none -
fig|6666666.65894.peg.1902 CDS gi|522808912|gb|ATVF01000003.1| 226569 225715 -3 - 855 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65894.peg.1903 CDS gi|522808912|gb|ATVF01000003.1| 227305 226562 -1 - 744 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65894.peg.1904 CDS gi|522808912|gb|ATVF01000003.1| 227832 227302 -3 - 531 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65894.peg.1905 CDS gi|522808912|gb|ATVF01000003.1| 228718 227936 -1 - 783 Cell division initiation protein - none -
fig|6666666.65894.peg.1906 CDS gi|522808912|gb|ATVF01000003.1| 230221 228878 -1 - 1344 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65894.peg.1907 CDS gi|522808912|gb|ATVF01000003.1| 230825 231925 2 + 1101 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.65894.peg.1908 CDS gi|522808912|gb|ATVF01000003.1| 232320 231922 -3 - 399 FIG00544156: hypothetical protein - none -
fig|6666666.65894.peg.1909 CDS gi|522808912|gb|ATVF01000003.1| 232529 233782 2 + 1254 Metal-dependent amidase/aminoacylase/carboxypeptidase (EC 3.5.1.32) - none -
fig|6666666.65894.peg.1910 CDS gi|522808912|gb|ATVF01000003.1| 236295 233767 -3 - 2529 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65894.peg.1911 CDS gi|522808912|gb|ATVF01000003.1| 237258 236356 -3 - 903 Glyoxalase family protein - none -
fig|6666666.65894.peg.1912 CDS gi|522808912|gb|ATVF01000003.1| 238788 237436 -3 - 1353 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65894.peg.1913 CDS gi|522808912|gb|ATVF01000003.1| 240032 239073 -2 - 960 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65894.peg.1914 CDS gi|522808912|gb|ATVF01000003.1| 240925 240140 -1 - 786 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65894.peg.1915 CDS gi|522808912|gb|ATVF01000003.1| 241662 241003 -3 - 660 FIG00545012: hypothetical protein - none -
fig|6666666.65894.peg.1916 CDS gi|522808912|gb|ATVF01000003.1| 242046 241690 -3 - 357 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65894.peg.1917 CDS gi|522808912|gb|ATVF01000003.1| 242819 242046 -2 - 774 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.65894.peg.1918 CDS gi|522808912|gb|ATVF01000003.1| 243632 242844 -2 - 789 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65894.peg.1919 CDS gi|522808912|gb|ATVF01000003.1| 244391 243651 -2 - 741 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.65894.peg.1920 CDS gi|522808912|gb|ATVF01000003.1| 245045 244410 -2 - 636 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.65894.peg.1921 CDS gi|522808912|gb|ATVF01000003.1| 246420 245137 -3 - 1284 putative transport protein - none -
fig|6666666.65894.peg.1922 CDS gi|522808912|gb|ATVF01000003.1| 246726 246499 -3 - 228 hypothetical protein - none -
fig|6666666.65894.peg.1923 CDS gi|522808912|gb|ATVF01000003.1| 247332 246730 -3 - 603 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.65894.peg.1924 CDS gi|522808912|gb|ATVF01000003.1| 248466 247348 -3 - 1119 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.65894.peg.1925 CDS gi|522808912|gb|ATVF01000003.1| 249798 248470 -3 - 1329 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.65894.peg.1926 CDS gi|522808912|gb|ATVF01000003.1| 250050 251090 3 + 1041 hypothetical protein - none -
fig|6666666.65894.peg.1927 CDS gi|522808912|gb|ATVF01000003.1| 251755 251087 -1 - 669 hypothetical protein - none -
fig|6666666.65894.peg.1928 CDS gi|522808912|gb|ATVF01000003.1| 252555 251884 -3 - 672 FIG00545144: hypothetical protein - none -
fig|6666666.65894.peg.1929 CDS gi|522808912|gb|ATVF01000003.1| 252669 253226 3 + 558 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.65894.peg.1930 CDS gi|522808912|gb|ATVF01000003.1| 253263 255812 3 + 2550 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65894.peg.1931 CDS gi|522808912|gb|ATVF01000003.1| 255938 255825 -2 - 114 hypothetical protein - none -
fig|6666666.65894.peg.1932 CDS gi|522808912|gb|ATVF01000003.1| 256406 255945 -2 - 462 Transcriptional regulator, HxlR family - none -
fig|6666666.65894.peg.1933 CDS gi|522808912|gb|ATVF01000003.1| 256653 258044 3 + 1392 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65894.peg.1934 CDS gi|522808912|gb|ATVF01000003.1| 259427 258090 -2 - 1338 hypothetical protein - none -
fig|6666666.65894.peg.1935 CDS gi|522808912|gb|ATVF01000003.1| 259876 260352 1 + 477 hypothetical protein - none -
fig|6666666.65894.peg.1936 CDS gi|522808912|gb|ATVF01000003.1| 260434 262875 1 + 2442 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65894.peg.1937 CDS gi|522808912|gb|ATVF01000003.1| 262919 263965 2 + 1047 FIG00544169: hypothetical protein - none -
fig|6666666.65894.peg.1938 CDS gi|522808912|gb|ATVF01000003.1| 264034 264165 1 + 132 FIG00544735: hypothetical protein - none -
fig|6666666.65894.peg.1939 CDS gi|522808912|gb|ATVF01000003.1| 264359 265420 2 + 1062 putative oxidoreductase - none -
fig|6666666.65894.peg.1940 CDS gi|522808912|gb|ATVF01000003.1| 265855 265475 -1 - 381 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65894.peg.1941 CDS gi|522808912|gb|ATVF01000003.1| 266110 265877 -1 - 234 FIG00544856: hypothetical protein - none -
fig|6666666.65894.peg.1942 CDS gi|522808912|gb|ATVF01000003.1| 266800 266135 -1 - 666 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.65894.peg.1943 CDS gi|522808912|gb|ATVF01000003.1| 266866 268587 1 + 1722 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) Trehalose Biosynthesis
fig|6666666.65894.peg.1944 CDS gi|522808912|gb|ATVF01000003.1| 269171 268584 -2 - 588 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.1945 CDS gi|522808912|gb|ATVF01000003.1| 269255 269641 2 + 387 hypothetical protein - none -
fig|6666666.65894.peg.1946 CDS gi|522808912|gb|ATVF01000003.1| 269664 270674 3 + 1011 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.65894.peg.1947 CDS gi|522808912|gb|ATVF01000003.1| 272068 270758 -1 - 1311 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65894.peg.1948 CDS gi|522808912|gb|ATVF01000003.1| 272260 272763 1 + 504 hypothetical membrane protein - none -
fig|6666666.65894.peg.1949 CDS gi|522808912|gb|ATVF01000003.1| 274046 272871 -2 - 1176 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.65894.peg.1950 CDS gi|522808912|gb|ATVF01000003.1| 277753 274187 -1 - 3567 DNA polymerase III alpha subunit (EC 2.7.7.7) Phage replication
fig|6666666.65894.peg.1951 CDS gi|522808912|gb|ATVF01000003.1| 277861 278721 1 + 861 Protein rarD - none -
fig|6666666.65894.peg.1952 CDS gi|522808912|gb|ATVF01000003.1| 279308 278718 -2 - 591 FIG00544566: hypothetical protein - none -
fig|6666666.65894.peg.1953 CDS gi|522808912|gb|ATVF01000003.1| 280238 279309 -2 - 930 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.65894.peg.1954 CDS gi|522808912|gb|ATVF01000003.1| 280747 280238 -1 - 510 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65894.peg.1955 CDS gi|522808912|gb|ATVF01000003.1| 281043 282134 3 + 1092 FIG00544955: hypothetical protein - none -
fig|6666666.65894.peg.1956 CDS gi|522808912|gb|ATVF01000003.1| 282296 283948 2 + 1653 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.1957 CDS gi|522808912|gb|ATVF01000003.1| 284506 283949 -1 - 558 Putative secreted protein - none -
fig|6666666.65894.peg.1958 CDS gi|522808912|gb|ATVF01000003.1| 284710 285741 1 + 1032 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65894.peg.1959 CDS gi|522808912|gb|ATVF01000003.1| 287153 285738 -2 - 1416 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65894.peg.1960 CDS gi|522808912|gb|ATVF01000003.1| 288076 287246 -1 - 831 permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.65894.peg.1961 CDS gi|522808912|gb|ATVF01000003.1| 289157 288147 -2 - 1011 putative transcriptional regulator - none -
fig|6666666.65894.peg.1962 CDS gi|522808912|gb|ATVF01000003.1| 289756 289151 -1 - 606 hypothetical protein - none -
fig|6666666.65894.peg.1963 CDS gi|522808912|gb|ATVF01000003.1| 293017 289853 -1 - 3165 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65894.peg.1964 CDS gi|522808912|gb|ATVF01000003.1| 293499 293338 -3 - 162 hypothetical membrane protein - none -
fig|6666666.65894.peg.1965 CDS gi|522808912|gb|ATVF01000003.1| 294718 293627 -1 - 1092 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.65894.peg.1966 CDS gi|522808912|gb|ATVF01000003.1| 295478 295191 -2 - 288 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65894.peg.1967 CDS gi|522808912|gb|ATVF01000003.1| 296159 295707 -2 - 453 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65894.peg.1968 CDS gi|522808912|gb|ATVF01000003.1| 296941 296237 -1 - 705 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65894.peg.1969 CDS gi|522808912|gb|ATVF01000003.1| 297681 296941 -3 - 741 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65894.peg.1970 CDS gi|522808912|gb|ATVF01000003.1| 299057 297708 -2 - 1350 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65894.peg.1971 CDS gi|522808912|gb|ATVF01000003.1| 300005 299337 -2 - 669 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65894.peg.1972 CDS gi|522808912|gb|ATVF01000003.1| 301490 300033 -2 - 1458 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65894.peg.1973 CDS gi|522808912|gb|ATVF01000003.1| 302603 301521 -2 - 1083 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1974 CDS gi|522808912|gb|ATVF01000003.1| 304180 302633 -1 - 1548 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65894.peg.1975 CDS gi|522808912|gb|ATVF01000003.1| 305676 304258 -3 - 1419 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65894.peg.1976 CDS gi|522808912|gb|ATVF01000003.1| 306780 305680 -3 - 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1977 CDS gi|522808912|gb|ATVF01000003.1| 308327 306786 -2 - 1542 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65894.peg.1978 CDS gi|522808912|gb|ATVF01000003.1| 309893 308337 -2 - 1557 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65894.peg.1979 CDS gi|522808912|gb|ATVF01000003.1| 309865 309984 1 + 120 hypothetical protein - none -
fig|6666666.65894.peg.1980 CDS gi|522808912|gb|ATVF01000003.1| 312103 310001 -1 - 2103 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.1981 CDS gi|522808912|gb|ATVF01000003.1| 312936 312100 -3 - 837 FIG00544004: hypothetical protein - none -
fig|6666666.65894.peg.1982 CDS gi|522808912|gb|ATVF01000003.1| 313946 312933 -2 - 1014 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65894.peg.1983 CDS gi|522808912|gb|ATVF01000003.1| 314616 314185 -3 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65894.peg.1984 CDS gi|522808912|gb|ATVF01000003.1| 315647 315258 -2 - 390 Possible membrane protein - none -
fig|6666666.65894.peg.1985 CDS gi|522808912|gb|ATVF01000003.1| 316203 315778 -3 - 426 hypothetical protein - none -
fig|6666666.65894.peg.1986 CDS gi|522808912|gb|ATVF01000003.1| 316386 316964 3 + 579 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65894.peg.1987 CDS gi|522808912|gb|ATVF01000003.1| 317849 316965 -2 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.65894.peg.1988 CDS gi|522808912|gb|ATVF01000003.1| 318058 319158 1 + 1101 Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.65894.peg.1989 CDS gi|522808912|gb|ATVF01000003.1| 319164 320729 3 + 1566 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65894.peg.1990 CDS gi|522808912|gb|ATVF01000003.1| 321171 320800 -3 - 372 Conserved hypothetical regulatory protein - none -
fig|6666666.65894.peg.1991 CDS gi|522808912|gb|ATVF01000003.1| 321370 323595 1 + 2226 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65894.peg.1992 CDS gi|522808912|gb|ATVF01000003.1| 323602 324825 1 + 1224 FIG00549427: hypothetical protein - none -
fig|6666666.65894.peg.1993 CDS gi|522808912|gb|ATVF01000003.1| 324964 326280 1 + 1317 FIG00544316: hypothetical protein - none -
fig|6666666.65894.peg.1994 CDS gi|522808912|gb|ATVF01000003.1| 327695 326349 -2 - 1347 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.1995 CDS gi|522808912|gb|ATVF01000003.1| 328325 327822 -2 - 504 FIG00544385: hypothetical protein - none -
fig|6666666.65894.peg.1996 CDS gi|522808912|gb|ATVF01000003.1| 328456 330879 1 + 2424 putative membrane protein - none -
fig|6666666.65894.peg.1997 CDS gi|522808912|gb|ATVF01000003.1| 331055 330909 -2 - 147 hypothetical protein - none -
fig|6666666.65894.peg.1998 CDS gi|522808912|gb|ATVF01000003.1| 332315 331092 -2 - 1224 hypothetical membrane protein - none -
fig|6666666.65894.peg.1999 CDS gi|522808912|gb|ATVF01000003.1| 333335 332601 -2 - 735 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2000 CDS gi|522808912|gb|ATVF01000003.1| 334437 333475 -3 - 963 ROK family protein (putative glucokinase) - none -
fig|6666666.65894.peg.2001 CDS gi|522808912|gb|ATVF01000003.1| 335662 334517 -1 - 1146 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65894.peg.2002 CDS gi|522808912|gb|ATVF01000003.1| 336670 335690 -1 - 981 NLP/P60 family protein - none -
fig|6666666.65894.peg.2003 CDS gi|522808912|gb|ATVF01000003.1| 337556 336921 -2 - 636 putative secreted protein - none -
fig|6666666.65894.peg.2004 CDS gi|522808912|gb|ATVF01000003.1| 340089 338476 -3 - 1614 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65894.peg.2005 CDS gi|522808912|gb|ATVF01000003.1| 341312 340086 -2 - 1227 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65894.peg.2006 CDS gi|522808912|gb|ATVF01000003.1| 342196 341309 -1 - 888 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65894.peg.2007 CDS gi|522808912|gb|ATVF01000003.1| 342871 342281 -1 - 591 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65894.peg.2008 CDS gi|522808912|gb|ATVF01000003.1| 343896 343465 -3 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.65894.peg.2009 CDS gi|522808912|gb|ATVF01000003.1| 344993 343914 -2 - 1080 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65894.peg.2010 CDS gi|522808912|gb|ATVF01000003.1| 345514 347436 1 + 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65894.peg.2011 CDS gi|522808912|gb|ATVF01000003.1| 347615 347457 -2 - 159 hypothetical protein - none -
fig|6666666.65894.peg.2012 CDS gi|522808912|gb|ATVF01000003.1| 347940 347596 -3 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65894.peg.2013 CDS gi|522808912|gb|ATVF01000003.1| 348272 349000 2 + 729 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65894.peg.2014 CDS gi|522808912|gb|ATVF01000003.1| 349111 350184 1 + 1074 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.65894.peg.2015 CDS gi|522808912|gb|ATVF01000003.1| 350897 350181 -2 - 717 Short chain dehydrogenase - none -
fig|6666666.65894.peg.2016 CDS gi|522808912|gb|ATVF01000003.1| 352220 351117 -2 - 1104 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65894.peg.2017 CDS gi|522808912|gb|ATVF01000003.1| 352406 353953 2 + 1548 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65894.peg.2018 CDS gi|522808912|gb|ATVF01000003.1| 354287 353961 -2 - 327 Putative oxidoreductase - none -
fig|6666666.65894.peg.2019 CDS gi|522808913|gb|ATVF01000002.1| 1893 628 -3 - 1266 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65894.peg.2020 CDS gi|522808913|gb|ATVF01000002.1| 2099 1920 -2 - 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.65894.peg.2021 CDS gi|522808913|gb|ATVF01000002.1| 3628 2195 -1 - 1434 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65894.peg.2022 CDS gi|522808913|gb|ATVF01000002.1| 4901 3696 -2 - 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65894.peg.2023 CDS gi|522808913|gb|ATVF01000002.1| 5577 5044 -3 - 534 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65894.peg.2024 CDS gi|522808913|gb|ATVF01000002.1| 6548 5589 -2 - 960 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65894.peg.2025 CDS gi|522808913|gb|ATVF01000002.1| 7772 6567 -2 - 1206 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65894.peg.2026 CDS gi|522808913|gb|ATVF01000002.1| 8727 7774 -3 - 954 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65894.peg.2027 CDS gi|522808913|gb|ATVF01000002.1| 9971 8805 -2 - 1167 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.65894.peg.2028 CDS gi|522808913|gb|ATVF01000002.1| 11048 10005 -2 - 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65894.peg.2029 CDS gi|522808913|gb|ATVF01000002.1| 13679 11172 -2 - 2508 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65894.peg.2030 CDS gi|522808913|gb|ATVF01000002.1| 14759 13722 -2 - 1038 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65894.peg.2031 CDS gi|522808913|gb|ATVF01000002.1| 15695 14874 -2 - 822 FIG011178: rRNA methylase RNA methylation
fig|6666666.65894.peg.2032 CDS gi|522808913|gb|ATVF01000002.1| 15802 16518 1 + 717 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65894.peg.2033 CDS gi|522808913|gb|ATVF01000002.1| 17796 16576 -3 - 1221 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65894.peg.2034 CDS gi|522808913|gb|ATVF01000002.1| 19195 17870 -1 - 1326 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65894.peg.2035 CDS gi|522808913|gb|ATVF01000002.1| 20089 19253 -1 - 837 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65894.peg.2036 CDS gi|522808913|gb|ATVF01000002.1| 21018 20086 -3 - 933 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65894.peg.2037 CDS gi|522808913|gb|ATVF01000002.1| 21622 21353 -1 - 270 hypothetical protein - none -
fig|6666666.65894.peg.2038 CDS gi|522808913|gb|ATVF01000002.1| 22176 21793 -3 - 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65894.peg.2039 CDS gi|522808913|gb|ATVF01000002.1| 22433 22239 -2 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65894.peg.2040 CDS gi|522808913|gb|ATVF01000002.1| 23031 22462 -3 - 570 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65894.peg.2041 CDS gi|522808913|gb|ATVF01000002.1| 23371 25365 1 + 1995 hypothetical membrane protein - none -
fig|6666666.65894.peg.2042 CDS gi|522808913|gb|ATVF01000002.1| 28198 25349 -1 - 2850 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65894.peg.2043 CDS gi|522808913|gb|ATVF01000002.1| 28293 28895 3 + 603 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65894.peg.2044 CDS gi|522808913|gb|ATVF01000002.1| 29184 30086 3 + 903 FIG00995839: hypothetical protein - none -
fig|6666666.65894.peg.2045 CDS gi|522808913|gb|ATVF01000002.1| 30316 30197 -1 - 120 hypothetical protein - none -
fig|6666666.65894.peg.2046 CDS gi|522808913|gb|ATVF01000002.1| 30454 32754 1 + 2301 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65894.peg.2047 CDS gi|522808913|gb|ATVF01000002.1| 33607 32762 -1 - 846 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.65894.peg.2048 CDS gi|522808913|gb|ATVF01000002.1| 33715 34116 1 + 402 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.65894.peg.2049 CDS gi|522808913|gb|ATVF01000002.1| 34623 34180 -3 - 444 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65894.peg.2050 CDS gi|522808913|gb|ATVF01000002.1| 36818 34722 -2 - 2097 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65894.peg.2051 CDS gi|522808913|gb|ATVF01000002.1| 37720 37412 -1 - 309 hypothetical protein - none -
fig|6666666.65894.peg.2052 CDS gi|522808913|gb|ATVF01000002.1| 39104 38169 -2 - 936 FIG00547933: hypothetical protein - none -
fig|6666666.65894.peg.2053 CDS gi|522808913|gb|ATVF01000002.1| 40210 39101 -1 - 1110 FIG00549115: hypothetical protein - none -
fig|6666666.65894.peg.2054 CDS gi|522808913|gb|ATVF01000002.1| 41058 40207 -3 - 852 FIG00547591: hypothetical protein - none -
fig|6666666.65894.peg.2055 CDS gi|522808913|gb|ATVF01000002.1| 41246 42139 2 + 894 FIG00549203: hypothetical protein - none -
fig|6666666.65894.peg.2056 CDS gi|522808913|gb|ATVF01000002.1| 42279 44306 3 + 2028 hypothetical protein - none -
fig|6666666.65894.peg.2057 CDS gi|522808913|gb|ATVF01000002.1| 44770 45810 1 + 1041 Ribose operon repressor D-ribose utilization
fig|6666666.65894.peg.2058 CDS gi|522808913|gb|ATVF01000002.1| 45791 46726 2 + 936 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65894.peg.2059 CDS gi|522808913|gb|ATVF01000002.1| 46794 48182 3 + 1389 putative transport protein - none -
fig|6666666.65894.peg.2060 CDS gi|522808913|gb|ATVF01000002.1| 48219 49157 3 + 939 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.2061 CDS gi|522808913|gb|ATVF01000002.1| 49636 49160 -1 - 477 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65894.peg.2062 CDS gi|522808913|gb|ATVF01000002.1| 50062 49703 -1 - 360 hypothetical protein - none -
fig|6666666.65894.peg.2063 CDS gi|522808913|gb|ATVF01000002.1| 50748 50146 -3 - 603 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65894.peg.2064 CDS gi|522808913|gb|ATVF01000002.1| 52754 50796 -2 - 1959 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.65894.peg.2065 CDS gi|522808913|gb|ATVF01000002.1| 55038 53575 -3 - 1464 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.65894.peg.2066 CDS gi|522808913|gb|ATVF01000002.1| 55385 56041 2 + 657 SAM-dependent methyltransferase - none -
fig|6666666.65894.peg.2067 CDS gi|522808913|gb|ATVF01000002.1| 56922 56038 -3 - 885 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65894.peg.2068 CDS gi|522808913|gb|ATVF01000002.1| 57867 56926 -3 - 942 putative DNA-binding protein - none -
fig|6666666.65894.peg.2069 CDS gi|522808913|gb|ATVF01000002.1| 58033 58524 1 + 492 hypothetical protein - none -
fig|6666666.65894.peg.2070 CDS gi|522808913|gb|ATVF01000002.1| 58627 59961 1 + 1335 FIG00546935: hypothetical protein - none -
fig|6666666.65894.peg.2071 CDS gi|522808913|gb|ATVF01000002.1| 62677 60008 -1 - 2670 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65894.peg.2072 CDS gi|522808913|gb|ATVF01000002.1| 64527 63685 -3 - 843 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - none -
fig|6666666.65894.peg.2073 CDS gi|522808913|gb|ATVF01000002.1| 64699 65583 1 + 885 putative DNA-binding protein - none -
fig|6666666.65894.peg.2074 CDS gi|522808913|gb|ATVF01000002.1| 66629 65580 -2 - 1050 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65894.peg.2075 CDS gi|522808913|gb|ATVF01000002.1| 66783 67106 3 + 324 Transcriptional regulator, ArsR family - none -
fig|6666666.65894.peg.2076 CDS gi|522808913|gb|ATVF01000002.1| 67197 68189 3 + 993 Luciferase-like monooxygenase (EC 1.14.-.-) - none -
fig|6666666.65894.peg.2077 CDS gi|522808913|gb|ATVF01000002.1| 68179 68517 1 + 339 hypothetical protein - none -
fig|6666666.65894.peg.2078 CDS gi|522808913|gb|ATVF01000002.1| 68481 69089 3 + 609 hypothetical protein - none -
fig|6666666.65894.peg.2079 CDS gi|522808913|gb|ATVF01000002.1| 69115 69765 1 + 651 hypothetical protein - none -
fig|6666666.65894.peg.2080 CDS gi|522808913|gb|ATVF01000002.1| 69999 70922 3 + 924 Putative secreted protein - none -
fig|6666666.65894.peg.2081 CDS gi|522808913|gb|ATVF01000002.1| 70973 71926 2 + 954 amino acid ABC transporter, permease protein (glnP) - none -
fig|6666666.65894.peg.2082 CDS gi|522808913|gb|ATVF01000002.1| 71927 72691 2 + 765 ATP-binding protein - none -
fig|6666666.65894.peg.2083 CDS gi|522808913|gb|ATVF01000002.1| 73595 72906 -2 - 690 hypothetical protein - none -
fig|6666666.65894.peg.2084 CDS gi|522808913|gb|ATVF01000002.1| 74135 73656 -2 - 480 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.65894.peg.2085 CDS gi|522808913|gb|ATVF01000002.1| 74722 74135 -1 - 588 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.65894.peg.2086 CDS gi|522808913|gb|ATVF01000002.1| 74937 74722 -3 - 216 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65894.peg.2087 CDS gi|522808913|gb|ATVF01000002.1| 77105 74982 -2 - 2124 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65894.peg.2088 CDS gi|522808913|gb|ATVF01000002.1| 78806 77109 -2 - 1698 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2089 CDS gi|522808913|gb|ATVF01000002.1| 79597 78818 -1 - 780 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65894.peg.2090 CDS gi|522808913|gb|ATVF01000002.1| 80590 79604 -1 - 987 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65894.peg.2091 CDS gi|522808913|gb|ATVF01000002.1| 80696 81682 2 + 987 Putative exported protein - none -
fig|6666666.65894.peg.2092 CDS gi|522808913|gb|ATVF01000002.1| 81786 82244 3 + 459 hypothetical protein - none -
fig|6666666.65894.peg.2093 CDS gi|522808913|gb|ATVF01000002.1| 83737 82652 -1 - 1086 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65894.peg.2094 CDS gi|522808913|gb|ATVF01000002.1| 84787 83762 -1 - 1026 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2095 CDS gi|522808913|gb|ATVF01000002.1| 85003 86013 1 + 1011 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65894.peg.2096 CDS gi|522808913|gb|ATVF01000002.1| 86690 86097 -2 - 594 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65894.peg.2097 CDS gi|522808913|gb|ATVF01000002.1| 88155 86710 -3 - 1446 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65894.peg.2098 CDS gi|522808913|gb|ATVF01000002.1| 88336 89043 1 + 708 Transcriptional regulator, IclR family - none -
fig|6666666.65894.peg.2099 CDS gi|522808913|gb|ATVF01000002.1| 89559 89026 -3 - 534 FIG00546260: hypothetical protein - none -
fig|6666666.65894.peg.2100 CDS gi|522808913|gb|ATVF01000002.1| 89868 89737 -3 - 132 hypothetical protein - none -
fig|6666666.65894.peg.2101 CDS gi|522808913|gb|ATVF01000002.1| 90178 90930 1 + 753 FIG00546461: hypothetical protein - none -
fig|6666666.65894.peg.2102 CDS gi|522808913|gb|ATVF01000002.1| 91037 92449 2 + 1413 FIG00544638: hypothetical protein - none -
fig|6666666.65894.peg.2103 CDS gi|522808913|gb|ATVF01000002.1| 92507 92665 2 + 159 FIG00546288: hypothetical protein - none -
fig|6666666.65894.peg.2104 CDS gi|522808913|gb|ATVF01000002.1| 92668 92799 1 + 132 hypothetical protein - none -
fig|6666666.65894.peg.2105 CDS gi|522808913|gb|ATVF01000002.1| 92861 95251 2 + 2391 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65894.peg.2106 CDS gi|522808913|gb|ATVF01000002.1| 95794 95465 -1 - 330 hypothetical protein - none -
fig|6666666.65894.peg.2107 CDS gi|522808913|gb|ATVF01000002.1| 96950 98746 2 + 1797 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.65894.peg.2108 CDS gi|522808913|gb|ATVF01000002.1| 98958 98743 -3 - 216 FIG00549910: hypothetical protein - none -
fig|6666666.65894.peg.2109 CDS gi|522808913|gb|ATVF01000002.1| 99430 99681 1 + 252 hypothetical protein - none -
fig|6666666.65894.peg.2110 CDS gi|522808913|gb|ATVF01000002.1| 103568 102156 -2 - 1413 hypothetical protein - none -
fig|6666666.65894.peg.2111 CDS gi|522808913|gb|ATVF01000002.1| 104624 103701 -2 - 924 Transporter - none -
fig|6666666.65894.peg.2112 CDS gi|522808913|gb|ATVF01000002.1| 106367 104685 -2 - 1683 hypothetical protein - none -
fig|6666666.65894.peg.2113 CDS gi|522808913|gb|ATVF01000002.1| 108199 106376 -1 - 1824 pathogenesis related protein - none -
fig|6666666.65894.peg.2114 CDS gi|522808913|gb|ATVF01000002.1| 111321 108394 -3 - 2928 Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.65894.peg.2115 CDS gi|522808913|gb|ATVF01000002.1| 113182 111335 -1 - 1848 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.65894.peg.2116 CDS gi|522808913|gb|ATVF01000002.1| 116119 113237 -1 - 2883 helicase (Snf2/Rad54 family) - none -
fig|6666666.65894.peg.2117 CDS gi|522808913|gb|ATVF01000002.1| 116380 116213 -1 - 168 hypothetical protein - none -
fig|6666666.65894.peg.2118 CDS gi|522808913|gb|ATVF01000002.1| 117609 117448 -3 - 162 hypothetical protein - none -
fig|6666666.65894.peg.2119 CDS gi|522808913|gb|ATVF01000002.1| 118516 119037 1 + 522 hypothetical protein - none -
fig|6666666.65894.peg.2120 CDS gi|522808913|gb|ATVF01000002.1| 119211 119612 3 + 402 hypothetical membrane protein - none -
fig|6666666.65894.peg.2121 CDS gi|522808913|gb|ATVF01000002.1| 119612 119818 2 + 207 Transcriptional regulator, Cro/CI family - none -
fig|6666666.65894.peg.2122 CDS gi|522808913|gb|ATVF01000002.1| 121354 119933 -1 - 1422 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65894.peg.2123 CDS gi|522808913|gb|ATVF01000002.1| 121489 122619 1 + 1131 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65894.peg.2124 CDS gi|522808913|gb|ATVF01000002.1| 123253 122864 -1 - 390 hypothetical protein - none -
fig|6666666.65894.peg.2125 CDS gi|522808913|gb|ATVF01000002.1| 123442 123266 -1 - 177 hypothetical protein - none -
fig|6666666.65894.peg.2126 CDS gi|522808913|gb|ATVF01000002.1| 124404 123802 -3 - 603 FIG00547055: hypothetical protein - none -
fig|6666666.65894.peg.2127 CDS gi|522808913|gb|ATVF01000002.1| 125211 124405 -3 - 807 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Pterin carbinolamine dehydratase;
Salicylate and gentisate catabolism
fig|6666666.65894.peg.2128 CDS gi|522808913|gb|ATVF01000002.1| 125962 125300 -1 - 663 DEDDh 3@1-5@1 exonuclease domain of the epsilon subunit of DNA polymerase III DNA replication strays
fig|6666666.65894.peg.2129 CDS gi|522808913|gb|ATVF01000002.1| 127818 125962 -3 - 1857 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65894.peg.2130 CDS gi|522808913|gb|ATVF01000002.1| 128956 127934 -1 - 1023 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65894.peg.2131 CDS gi|522808913|gb|ATVF01000002.1| 130821 129229 -3 - 1593 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65894.peg.2132 CDS gi|522808913|gb|ATVF01000002.1| 132979 131246 -1 - 1734 FIG00544526: hypothetical protein - none -
fig|6666666.65894.peg.2133 CDS gi|522808913|gb|ATVF01000002.1| 134843 133026 -2 - 1818 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.65894.peg.2134 CDS gi|522808913|gb|ATVF01000002.1| 135821 134859 -2 - 963 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65894.peg.2135 CDS gi|522808913|gb|ATVF01000002.1| 137022 136006 -3 - 1017 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65894.peg.2136 CDS gi|522808913|gb|ATVF01000002.1| 137763 137245 -3 - 519 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65894.peg.2137 CDS gi|522808913|gb|ATVF01000002.1| 139656 137776 -3 - 1881 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65894.peg.2138 CDS gi|522808913|gb|ATVF01000002.1| 140079 141692 3 + 1614 FIG00544780: hypothetical protein - none -
fig|6666666.65894.peg.2139 CDS gi|522808913|gb|ATVF01000002.1| 141739 142311 1 + 573 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65894.peg.2140 CDS gi|522808913|gb|ATVF01000002.1| 142557 144398 3 + 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65894.peg.2141 CDS gi|522808913|gb|ATVF01000002.1| 144814 144491 -1 - 324 Transcriptional regulator, ArsR family - none -
fig|6666666.65894.peg.2142 CDS gi|522808913|gb|ATVF01000002.1| 144873 145943 3 + 1071 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.65894.peg.2143 CDS gi|522808913|gb|ATVF01000002.1| 147037 146024 -1 - 1014 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.65894.peg.2144 CDS gi|522808913|gb|ATVF01000002.1| 147977 147120 -2 - 858 putative secreted protein - none -
fig|6666666.65894.peg.2145 CDS gi|522808913|gb|ATVF01000002.1| 148111 149190 1 + 1080 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.65894.peg.2146 CDS gi|522808913|gb|ATVF01000002.1| 150059 149187 -2 - 873 lysine export regulator protein - none -
fig|6666666.65894.peg.2147 CDS gi|522808913|gb|ATVF01000002.1| 150129 150848 3 + 720 lysine exporter protein - none -
fig|6666666.65894.peg.2148 CDS gi|522808913|gb|ATVF01000002.1| 151969 150845 -1 - 1125 Putative aldo/keto-reductase family protein - none -
fig|6666666.65894.peg.2149 CDS gi|522808913|gb|ATVF01000002.1| 152743 152063 -1 - 681 NADP oxidoreductase, coenzyme F420-dependent - none -
fig|6666666.65894.peg.2150 CDS gi|522808913|gb|ATVF01000002.1| 154495 152990 -1 - 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65894.peg.2151 CDS gi|522808913|gb|ATVF01000002.1| 155685 154699 -3 - 987 Sodium-dependent transporter - none -
fig|6666666.65894.peg.2152 CDS gi|522808913|gb|ATVF01000002.1| 156585 155986 -3 - 600 N-acetylglutamate synthase related protein Arginine Biosynthesis -- gjo
fig|6666666.65894.peg.2153 CDS gi|522808913|gb|ATVF01000002.1| 157154 156783 -2 - 372 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.65894.peg.2154 CDS gi|522808913|gb|ATVF01000002.1| 158105 157161 -2 - 945 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.65894.peg.2155 CDS gi|522808913|gb|ATVF01000002.1| 159160 158141 -1 - 1020 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.65894.peg.2156 CDS gi|522808913|gb|ATVF01000002.1| 160758 159157 -3 - 1602 ABC-type sugar transport system, ATP-binding protein (EC 3.6.3.17) - none -
fig|6666666.65894.peg.2157 CDS gi|522808913|gb|ATVF01000002.1| 161852 160758 -2 - 1095 transcriptional regulator - none -
fig|6666666.65894.peg.2158 CDS gi|522808913|gb|ATVF01000002.1| 163110 162070 -3 - 1041 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65894.peg.2159 CDS gi|522808913|gb|ATVF01000002.1| 163333 163653 1 + 321 Conserved putative integral membrane protein - none -
fig|6666666.65894.peg.2160 CDS gi|522808913|gb|ATVF01000002.1| 164548 163658 -1 - 891 siderophore-interacting protein - none -
fig|6666666.65894.peg.2161 CDS gi|522808913|gb|ATVF01000002.1| 166222 164729 -1 - 1494 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65894.peg.2162 CDS gi|522808913|gb|ATVF01000002.1| 166528 166229 -1 - 300 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65894.peg.2163 CDS gi|522808913|gb|ATVF01000002.1| 166813 167475 1 + 663 FIG00544014: hypothetical protein - none -
fig|6666666.65894.peg.2164 CDS gi|522808913|gb|ATVF01000002.1| 168461 167472 -2 - 990 putative nisin resistance protein - none -
fig|6666666.65894.peg.2165 CDS gi|522808913|gb|ATVF01000002.1| 170618 168573 -2 - 2046 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65894.peg.2166 CDS gi|522808913|gb|ATVF01000002.1| 170751 171461 3 + 711 FIG00544413: hypothetical protein - none -
fig|6666666.65894.peg.2167 CDS gi|522808913|gb|ATVF01000002.1| 171571 173043 1 + 1473 permease of the major facilitator superfamily - none -
fig|6666666.65894.peg.2168 CDS gi|522808913|gb|ATVF01000002.1| 174042 173044 -3 - 999 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.65894.peg.2169 CDS gi|522808913|gb|ATVF01000002.1| 175143 174046 -3 - 1098 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.65894.peg.2170 CDS gi|522808913|gb|ATVF01000002.1| 175438 176580 1 + 1143 FIG00544505: hypothetical protein - none -
fig|6666666.65894.peg.2171 CDS gi|522808913|gb|ATVF01000002.1| 176612 177547 2 + 936 Spermidine synthase-like protein - none -
fig|6666666.65894.peg.2172 CDS gi|522808913|gb|ATVF01000002.1| 178923 177808 -3 - 1116 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65894.peg.2173 CDS gi|522808913|gb|ATVF01000002.1| 179897 178944 -2 - 954 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.65894.peg.2174 CDS gi|522808913|gb|ATVF01000002.1| 180711 179923 -3 - 789 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.65894.peg.2175 CDS gi|522808913|gb|ATVF01000002.1| 182056 180842 -1 - 1215 SAM-dependent methyltransferase - none -
fig|6666666.65894.peg.2176 CDS gi|522808913|gb|ATVF01000002.1| 182908 182108 -1 - 801 FIG00996530: hypothetical protein - none -
fig|6666666.65894.peg.2177 CDS gi|522808913|gb|ATVF01000002.1| 183833 182955 -2 - 879 ABC transporter, ATP-binding protein - none -
fig|6666666.65894.peg.2178 CDS gi|522808913|gb|ATVF01000002.1| 183986 186013 2 + 2028 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.65894.peg.2179 CDS gi|522808913|gb|ATVF01000002.1| 186131 188326 2 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65894.peg.2180 CDS gi|522808913|gb|ATVF01000002.1| 189363 188395 -3 - 969 Alkanesulfonates-binding protein Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.65894.peg.2181 CDS gi|522808913|gb|ATVF01000002.1| 190148 189396 -2 - 753 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.65894.peg.2182 CDS gi|522808913|gb|ATVF01000002.1| 190939 190157 -1 - 783 Alkanesulfonates transport system permease protein Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.65894.peg.2183 CDS gi|522808913|gb|ATVF01000002.1| 192136 190997 -1 - 1140 Alkanesulfonate monooxygenase (EC 1.14.14.5) Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.65894.peg.2184 CDS gi|522808913|gb|ATVF01000002.1| 193211 192288 -2 - 924 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65894.peg.2185 CDS gi|522808913|gb|ATVF01000002.1| 193565 193257 -2 - 309 FIG00544011: hypothetical protein - none -
fig|6666666.65894.peg.2186 CDS gi|522808913|gb|ATVF01000002.1| 193872 193585 -3 - 288 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.65894.peg.2187 CDS gi|522808913|gb|ATVF01000002.1| 194573 193881 -2 - 693 FIG00996186: hypothetical protein - none -
fig|6666666.65894.peg.2188 CDS gi|522808913|gb|ATVF01000002.1| 195082 194600 -1 - 483 FIG00544079: hypothetical protein - none -
fig|6666666.65894.peg.2189 CDS gi|522808913|gb|ATVF01000002.1| 195704 195330 -2 - 375 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2190 CDS gi|522808913|gb|ATVF01000002.1| 197167 195716 -1 - 1452 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2191 CDS gi|522808913|gb|ATVF01000002.1| 198148 197171 -1 - 978 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2192 CDS gi|522808913|gb|ATVF01000002.1| 199849 198206 -1 - 1644 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2193 CDS gi|522808913|gb|ATVF01000002.1| 200725 199910 -1 - 816 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2194 CDS gi|522808913|gb|ATVF01000002.1| 201303 200731 -3 - 573 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2195 CDS gi|522808913|gb|ATVF01000002.1| 201576 201334 -3 - 243 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2196 CDS gi|522808913|gb|ATVF01000002.1| 202527 201715 -3 - 813 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65894.peg.2197 CDS gi|522808913|gb|ATVF01000002.1| 203641 203165 -1 - 477 ATP synthase protein I - none -
fig|6666666.65894.peg.2198 CDS gi|522808913|gb|ATVF01000002.1| 204867 203704 -3 - 1164 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.65894.peg.2199 CDS gi|522808913|gb|ATVF01000002.1| 205518 204868 -3 - 651 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.65894.peg.2200 CDS gi|522808913|gb|ATVF01000002.1| 206470 205634 -1 - 837 Methylase of polypeptide chain release factors - none -
fig|6666666.65894.peg.2201 CDS gi|522808913|gb|ATVF01000002.1| 207550 206474 -1 - 1077 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.65894.peg.2202 CDS gi|522808913|gb|ATVF01000002.1| 209928 207550 -3 - 2379 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65894.peg.2203 CDS gi|522808913|gb|ATVF01000002.1| 210485 212200 2 + 1716 acyl-CoA synthetase - none -
fig|6666666.65894.peg.2204 CDS gi|522808913|gb|ATVF01000002.1| 212278 212838 1 + 561 hypothetical protein - none -
fig|6666666.65894.peg.2205 CDS gi|522808913|gb|ATVF01000002.1| 213809 212880 -2 - 930 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65894.peg.2206 CDS gi|522808913|gb|ATVF01000002.1| 215156 213819 -2 - 1338 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65894.peg.2207 CDS gi|522808913|gb|ATVF01000002.1| 215614 216321 1 + 708 hypothetical protein - none -
fig|6666666.65894.peg.2208 CDS gi|522808913|gb|ATVF01000002.1| 218607 216370 -3 - 2238 hypothetical protein - none -
fig|6666666.65894.peg.2209 CDS gi|522808913|gb|ATVF01000002.1| 219250 218600 -1 - 651 Two-component system, regulatory protein - none -
fig|6666666.65894.peg.2210 CDS gi|522808913|gb|ATVF01000002.1| 219613 220200 1 + 588 hypothetical protein - none -
fig|6666666.65894.peg.2211 CDS gi|522808913|gb|ATVF01000002.1| 221656 220289 -1 - 1368 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.2212 CDS gi|522808913|gb|ATVF01000002.1| 223309 221657 -1 - 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65894.peg.2213 CDS gi|522808913|gb|ATVF01000002.1| 224062 224472 1 + 411 hypothetical protein - none -
fig|6666666.65894.peg.2214 CDS gi|522808913|gb|ATVF01000002.1| 224735 224523 -2 - 213 FIG00546860: hypothetical protein - none -
fig|6666666.65894.peg.2215 CDS gi|522808913|gb|ATVF01000002.1| 225365 224880 -2 - 486 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.2216 CDS gi|522808913|gb|ATVF01000002.1| 225625 226164 1 + 540 FIG00545197: hypothetical protein - none -
fig|6666666.65894.peg.2217 CDS gi|522808913|gb|ATVF01000002.1| 228862 226241 -1 - 2622 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.65894.peg.2218 CDS gi|522808913|gb|ATVF01000002.1| 230043 228868 -3 - 1176 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65894.peg.2219 CDS gi|522808913|gb|ATVF01000002.1| 230992 230114 -1 - 879 FIG00545674: hypothetical protein - none -
fig|6666666.65894.peg.2220 CDS gi|522808913|gb|ATVF01000002.1| 234089 230985 -2 - 3105 Helicase, SNF2/RAD54 family - none -
fig|6666666.65894.peg.2221 CDS gi|522808913|gb|ATVF01000002.1| 234391 235953 1 + 1563 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65894.peg.2222 CDS gi|522808913|gb|ATVF01000002.1| 236056 236550 1 + 495 FIG00544279: hypothetical protein - none -
fig|6666666.65894.peg.2223 CDS gi|522808913|gb|ATVF01000002.1| 236617 237090 1 + 474 FIG00544250: hypothetical protein - none -
fig|6666666.65894.peg.2224 CDS gi|522808913|gb|ATVF01000002.1| 238257 237196 -3 - 1062 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2225 CDS gi|522808913|gb|ATVF01000002.1| 238460 239143 2 + 684 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.2226 CDS gi|522808913|gb|ATVF01000002.1| 239423 239683 2 + 261 serine protease - none -
fig|6666666.65894.peg.2227 CDS gi|522808913|gb|ATVF01000002.1| 239711 241354 2 + 1644 serine protease - none -
fig|6666666.65894.peg.2228 CDS gi|522808913|gb|ATVF01000002.1| 243746 241476 -2 - 2271 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65894.peg.2229 CDS gi|522808913|gb|ATVF01000002.1| 244056 245468 3 + 1413 putative gamma-aminobutyrate permease - none -
fig|6666666.65894.peg.2230 CDS gi|522808913|gb|ATVF01000002.1| 246277 245555 -1 - 723 hypothetical protein - none -
fig|6666666.65894.peg.2231 CDS gi|522808913|gb|ATVF01000002.1| 246599 248140 2 + 1542 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65894.peg.2232 CDS gi|522808913|gb|ATVF01000002.1| 248143 249192 1 + 1050 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65894.peg.2233 CDS gi|522808913|gb|ATVF01000002.1| 249189 250733 3 + 1545 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65894.peg.2234 CDS gi|522808913|gb|ATVF01000002.1| 250730 252286 2 + 1557 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65894.peg.2235 CDS gi|522808913|gb|ATVF01000002.1| 253497 252298 -3 - 1200 hypothetical protein - none -
fig|6666666.65894.peg.2236 CDS gi|522808913|gb|ATVF01000002.1| 253656 254054 3 + 399 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65894.peg.2237 CDS gi|522808913|gb|ATVF01000002.1| 254051 256963 2 + 2913 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.65894.peg.2238 CDS gi|522808913|gb|ATVF01000002.1| 258515 256956 -2 - 1560 non-ribosomal peptide synthetase modules and related proteins - none -
fig|6666666.65894.peg.2239 CDS gi|522808913|gb|ATVF01000002.1| 258679 259473 1 + 795 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65894.peg.2240 CDS gi|522808913|gb|ATVF01000002.1| 260357 259470 -2 - 888 hypothetical protein - none -
fig|6666666.65894.peg.2241 CDS gi|522808913|gb|ATVF01000002.1| 260779 260432 -1 - 348 hypothetical membrane protein - none -
fig|6666666.65894.peg.2242 CDS gi|522808913|gb|ATVF01000002.1| 261389 263629 2 + 2241 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.65894.peg.2243 CDS gi|522808913|gb|ATVF01000002.1| 264974 263622 -2 - 1353 putative multidrug resistance protein - none -
fig|6666666.65894.peg.2244 CDS gi|522808913|gb|ATVF01000002.1| 266188 264971 -1 - 1218 putative multidrug resistance protein - none -
fig|6666666.65894.peg.2245 CDS gi|522808913|gb|ATVF01000002.1| 266315 266812 2 + 498 FIG00547362: hypothetical protein - none -
fig|6666666.65894.peg.2246 CDS gi|522808913|gb|ATVF01000002.1| 267720 266869 -3 - 852 FIG00544678: hypothetical protein - none -
fig|6666666.65894.peg.2247 CDS gi|522808913|gb|ATVF01000002.1| 269534 267855 -2 - 1680 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65894.peg.2248 CDS gi|522808913|gb|ATVF01000002.1| 269643 270113 3 + 471 conserved hypothetical protein - none -
fig|6666666.65894.peg.2249 CDS gi|522808913|gb|ATVF01000002.1| 270193 270999 1 + 807 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65894.peg.2250 CDS gi|522808913|gb|ATVF01000002.1| 271028 271744 2 + 717 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.65894.peg.2251 CDS gi|522808913|gb|ATVF01000002.1| 271914 275606 3 + 3693 FIG00543822: hypothetical protein - none -
fig|6666666.65894.peg.2252 CDS gi|522808913|gb|ATVF01000002.1| 275797 279444 1 + 3648 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65894.peg.2253 CDS gi|522808913|gb|ATVF01000002.1| 280196 279522 -2 - 675 FIG00544048: hypothetical protein - none -
fig|6666666.65894.peg.2254 CDS gi|522808913|gb|ATVF01000002.1| 280709 280212 -2 - 498 PROBABLE TRANSMEMBRANE PROTEIN - none -
fig|6666666.65894.peg.2255 CDS gi|522808913|gb|ATVF01000002.1| 280836 282086 3 + 1251 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65894.peg.2256 CDS gi|522808913|gb|ATVF01000002.1| 282079 282666 1 + 588 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.65894.peg.2257 CDS gi|522808913|gb|ATVF01000002.1| 282695 283819 2 + 1125 Mrp protein homolog - none -
fig|6666666.65894.peg.2258 CDS gi|522808913|gb|ATVF01000002.1| 284345 283881 -2 - 465 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65894.peg.2259 CDS gi|522808913|gb|ATVF01000002.1| 284903 284388 -2 - 516 FIG00544000: hypothetical protein - none -
fig|6666666.65894.peg.2260 CDS gi|522808913|gb|ATVF01000002.1| 285695 285045 -2 - 651 putative RNA polymerase sigma factor - none -
fig|6666666.65894.peg.2261 CDS gi|522808913|gb|ATVF01000002.1| 285832 286473 1 + 642 FIG00945644: hypothetical protein - none -
fig|6666666.65894.peg.2262 CDS gi|522808913|gb|ATVF01000002.1| 287745 286516 -3 - 1230 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65894.peg.2263 CDS gi|522808913|gb|ATVF01000002.1| 287875 289035 1 + 1161 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.65894.peg.2264 CDS gi|522808913|gb|ATVF01000002.1| 289197 290702 3 + 1506 levanase/invertase - none -
fig|6666666.65894.peg.2265 CDS gi|522808913|gb|ATVF01000002.1| 291626 290757 -2 - 870 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.65894.peg.2266 CDS gi|522808913|gb|ATVF01000002.1| 291858 291691 -3 - 168 FIG00545868: hypothetical protein - none -
fig|6666666.65894.peg.2267 CDS gi|522808913|gb|ATVF01000002.1| 292250 291951 -2 - 300 FIG00545506: hypothetical protein - none -
fig|6666666.65894.peg.2268 CDS gi|522808913|gb|ATVF01000002.1| 292982 292257 -2 - 726 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.65894.peg.2269 CDS gi|522808913|gb|ATVF01000002.1| 293812 292979 -1 - 834 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.65894.peg.2270 CDS gi|522808913|gb|ATVF01000002.1| 294604 293834 -1 - 771 FIG00543965: hypothetical protein - none -
fig|6666666.65894.peg.2271 CDS gi|522808913|gb|ATVF01000002.1| 295780 294659 -1 - 1122 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.2272 CDS gi|522808913|gb|ATVF01000002.1| 295831 296781 1 + 951 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.2273 CDS gi|522808913|gb|ATVF01000002.1| 296884 298224 1 + 1341 Aromatic amino acid transport protein AroP - none -
fig|6666666.65894.peg.2274 CDS gi|522808913|gb|ATVF01000002.1| 298253 299173 2 + 921 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.2275 CDS gi|522808913|gb|ATVF01000002.1| 300348 299194 -3 - 1155 protein of unknown function DUF222 - none -
fig|6666666.65894.peg.2276 CDS gi|522808913|gb|ATVF01000002.1| 301022 300492 -2 - 531 FIG00544080: hypothetical protein - none -
fig|6666666.65894.peg.2277 CDS gi|522808913|gb|ATVF01000002.1| 302217 301111 -3 - 1107 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.2278 CDS gi|522808913|gb|ATVF01000002.1| 302544 302227 -3 - 318 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2279 CDS gi|522808913|gb|ATVF01000002.1| 303022 302609 -1 - 414 hypothetical membrane protein - none -
fig|6666666.65894.peg.2280 CDS gi|522808913|gb|ATVF01000002.1| 303908 303027 -2 - 882 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65894.peg.2281 CDS gi|522808913|gb|ATVF01000002.1| 305316 303898 -3 - 1419 LpqW - none -
fig|6666666.65894.peg.2282 CDS gi|522808913|gb|ATVF01000002.1| 307378 305465 -1 - 1914 GTP-binding protein TypA/BipA - none -
fig|6666666.65894.peg.2283 CDS gi|522808913|gb|ATVF01000002.1| 307842 308543 3 + 702 FIG00544264: hypothetical protein - none -
fig|6666666.65894.peg.2284 CDS gi|522808913|gb|ATVF01000002.1| 308549 309088 2 + 540 FIG00544603: hypothetical protein - none -
fig|6666666.65894.peg.2285 CDS gi|522808913|gb|ATVF01000002.1| 310292 309123 -2 - 1170 FIG00545606: hypothetical protein - none -
fig|6666666.65894.peg.2286 CDS gi|522808913|gb|ATVF01000002.1| 310356 310703 3 + 348 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65894.peg.2287 CDS gi|522808913|gb|ATVF01000002.1| 310750 311628 1 + 879 FIG00548480: hypothetical protein - none -
fig|6666666.65894.peg.2288 CDS gi|522808913|gb|ATVF01000002.1| 311632 312021 1 + 390 hypothetical membrane protein - none -
fig|6666666.65894.peg.2289 CDS gi|522808913|gb|ATVF01000002.1| 312416 312018 -2 - 399 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65894.peg.2290 CDS gi|522808913|gb|ATVF01000002.1| 312783 312403 -3 - 381 hypothetical protein - none -
fig|6666666.65894.peg.2291 CDS gi|522808913|gb|ATVF01000002.1| 313711 312800 -1 - 912 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.65894.peg.2292 CDS gi|522808913|gb|ATVF01000002.1| 313769 314722 2 + 954 Membrane protein, putative - none -
fig|6666666.65894.peg.2293 CDS gi|522808913|gb|ATVF01000002.1| 314859 316667 3 + 1809 hypothetical protein - none -
fig|6666666.65894.peg.2294 CDS gi|522808913|gb|ATVF01000002.1| 317230 316733 -1 - 498 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.65894.peg.2295 CDS gi|522808913|gb|ATVF01000002.1| 317383 319725 1 + 2343 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65894.peg.2296 CDS gi|522808913|gb|ATVF01000002.1| 320426 319722 -2 - 705 FIG00547157: hypothetical protein - none -
fig|6666666.65894.peg.2297 CDS gi|522808913|gb|ATVF01000002.1| 321481 320447 -1 - 1035 calcium/proton antiporter - none -
fig|6666666.65894.peg.2298 CDS gi|522808913|gb|ATVF01000002.1| 322003 321509 -1 - 495 FIG00546937: hypothetical protein - none -
fig|6666666.65894.peg.2299 CDS gi|522808913|gb|ATVF01000002.1| 322755 322000 -3 - 756 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65894.peg.2300 CDS gi|522808913|gb|ATVF01000002.1| 324092 322752 -2 - 1341 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.65894.peg.2301 CDS gi|522808913|gb|ATVF01000002.1| 324700 324092 -1 - 609 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65894.peg.2302 CDS gi|522808913|gb|ATVF01000002.1| 325078 326283 1 + 1206 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) p-Hydroxybenzoate degradation
fig|6666666.65894.peg.2303 CDS gi|522808913|gb|ATVF01000002.1| 326289 327578 3 + 1290 4-hydroxybenzoate transporter Gentisate degradation;
Salicylate and gentisate catabolism;
p-Hydroxybenzoate degradation
fig|6666666.65894.peg.2304 CDS gi|522808913|gb|ATVF01000002.1| 328070 327660 -2 - 411 FIG00544525: hypothetical protein - none -
fig|6666666.65894.peg.2305 CDS gi|522808913|gb|ATVF01000002.1| 328204 328962 1 + 759 Transcriptional regulator, GntR family - none -
fig|6666666.65894.peg.2306 CDS gi|522808913|gb|ATVF01000002.1| 329750 328959 -2 - 792 hypothetical protein - none -
fig|6666666.65894.peg.2307 CDS gi|522808913|gb|ATVF01000002.1| 330086 329967 -2 - 120 hypothetical protein - none -
fig|6666666.65894.peg.2308 CDS gi|522808913|gb|ATVF01000002.1| 330336 331394 3 + 1059 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.65894.peg.2309 CDS gi|522808913|gb|ATVF01000002.1| 331440 332558 3 + 1119 putative DNA alkylation repair protein - none -
fig|6666666.65894.peg.2310 CDS gi|522808913|gb|ATVF01000002.1| 332585 333202 2 + 618 FIG00544130: hypothetical protein - none -
fig|6666666.65894.peg.2311 CDS gi|522808913|gb|ATVF01000002.1| 334119 333199 -3 - 921 FIG00545591: hypothetical protein - none -
fig|6666666.65894.peg.2312 CDS gi|522808913|gb|ATVF01000002.1| 334242 334916 3 + 675 Nudix-related transcriptional regulator NrtR NAD and NADP cofactor biosynthesis global
fig|6666666.65894.peg.2313 CDS gi|522808913|gb|ATVF01000002.1| 335034 334906 -3 - 129 hypothetical protein - none -
fig|6666666.65894.peg.2314 CDS gi|522808913|gb|ATVF01000002.1| 335002 336171 1 + 1170 Quinolinate synthetase (EC 2.5.1.72) NAD and NADP cofactor biosynthesis global
fig|6666666.65894.peg.2315 CDS gi|522808913|gb|ATVF01000002.1| 336168 337010 3 + 843 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) NAD and NADP cofactor biosynthesis global
fig|6666666.65894.peg.2316 CDS gi|522808913|gb|ATVF01000002.1| 337011 338102 3 + 1092 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65894.peg.2317 CDS gi|522808913|gb|ATVF01000002.1| 339323 338124 -2 - 1200 permease of the major facilitator superfamily - none -
fig|6666666.65894.peg.2318 CDS gi|522808913|gb|ATVF01000002.1| 339465 339926 3 + 462 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.2319 CDS gi|522808913|gb|ATVF01000002.1| 340267 339923 -1 - 345 Alkylphosphonate utilization operon protein PhnA Alkylphosphonate utilization
fig|6666666.65894.peg.2320 CDS gi|522808913|gb|ATVF01000002.1| 340285 340728 1 + 444 hypothetical protein - none -
fig|6666666.65894.peg.2321 CDS gi|522808913|gb|ATVF01000002.1| 342368 340725 -2 - 1644 ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.2322 CDS gi|522808913|gb|ATVF01000002.1| 343179 342415 -3 - 765 FIG00547971: hypothetical protein - none -
fig|6666666.65894.peg.2323 CDS gi|522808913|gb|ATVF01000002.1| 343983 343261 -3 - 723 FIG00549881: hypothetical protein - none -
fig|6666666.65894.peg.2324 CDS gi|522808913|gb|ATVF01000002.1| 344625 343987 -3 - 639 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.65894.peg.2325 CDS gi|522808913|gb|ATVF01000002.1| 344675 346063 2 + 1389 Magnesium chelatase, subunit ChlI (EC 6.6.1.1) CBSS-336982.3.peg.1011
fig|6666666.65894.peg.2326 CDS gi|522808913|gb|ATVF01000002.1| 346087 348036 1 + 1950 FIG019045: long form Mg-chelase associated protein with vWA domain CBSS-336982.3.peg.1011
fig|6666666.65894.peg.2327 CDS gi|522808913|gb|ATVF01000002.1| 348980 348033 -2 - 948 PQQ-dependent oxidoreductase, gdhB family - none -
fig|6666666.65894.peg.2328 CDS gi|522808913|gb|ATVF01000002.1| 348961 349074 1 + 114 hypothetical protein - none -
fig|6666666.65894.peg.2329 CDS gi|522808913|gb|ATVF01000002.1| 349240 350586 1 + 1347 Putative secreted protein - none -
fig|6666666.65894.peg.2330 CDS gi|522808913|gb|ATVF01000002.1| 351153 350593 -3 - 561 Rrf2-linked NADH-flavin reductase - none -
fig|6666666.65894.peg.2331 CDS gi|522808913|gb|ATVF01000002.1| 351313 351597 1 + 285 Glyoxalase family protein - none -
fig|6666666.65894.peg.2332 CDS gi|522808913|gb|ATVF01000002.1| 352925 351594 -2 - 1332 Transcriptional regulator, XRE family - none -
fig|6666666.65894.peg.2333 CDS gi|522808913|gb|ATVF01000002.1| 353095 354594 1 + 1500 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65894.peg.2334 CDS gi|522808913|gb|ATVF01000002.1| 354594 355517 3 + 924 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65894.peg.2335 CDS gi|522808913|gb|ATVF01000002.1| 355574 356719 2 + 1146 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65894.peg.2336 CDS gi|522808913|gb|ATVF01000002.1| 358477 356795 -1 - 1683 Sulfate transporter - none -
fig|6666666.65894.peg.2337 CDS gi|522808913|gb|ATVF01000002.1| 359098 358601 -1 - 498 hypothetical protein - none -
fig|6666666.65894.peg.2338 CDS gi|522808913|gb|ATVF01000002.1| 359514 359200 -3 - 315 cation efflux protein - none -
fig|6666666.65894.peg.2339 CDS gi|522808913|gb|ATVF01000002.1| 359788 359949 1 + 162 hypothetical protein - none -
fig|6666666.65894.peg.2340 CDS gi|522808913|gb|ATVF01000002.1| 360911 360081 -2 - 831 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.65894.peg.2341 CDS gi|522808913|gb|ATVF01000002.1| 361803 360871 -3 - 933 probable methyltransferase - none -
fig|6666666.65894.peg.2342 CDS gi|522808913|gb|ATVF01000002.1| 361906 362421 1 + 516 possible transcriptional regulator - none -
fig|6666666.65894.peg.2343 CDS gi|522808913|gb|ATVF01000002.1| 362514 363035 3 + 522 hypothetical protein - none -
fig|6666666.65894.peg.2344 CDS gi|522808913|gb|ATVF01000002.1| 364159 363074 -1 - 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65894.peg.2345 CDS gi|522808913|gb|ATVF01000002.1| 364385 366073 2 + 1689 Sodium-dependent transporter - none -
fig|6666666.65894.peg.2346 CDS gi|522808913|gb|ATVF01000002.1| 366076 366249 1 + 174 hypothetical protein - none -
fig|6666666.65894.peg.2347 CDS gi|522808913|gb|ATVF01000002.1| 366340 367809 1 + 1470 FIG00546199: hypothetical protein - none -
fig|6666666.65894.peg.2348 CDS gi|522808913|gb|ATVF01000002.1| 367842 368873 3 + 1032 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.65894.peg.2349 CDS gi|522808913|gb|ATVF01000002.1| 368992 369783 1 + 792 FIG00544176: hypothetical protein - none -
fig|6666666.65894.peg.2350 CDS gi|522808913|gb|ATVF01000002.1| 370793 369816 -2 - 978 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65894.peg.2351 CDS gi|522808913|gb|ATVF01000002.1| 370908 372149 3 + 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65894.peg.2352 CDS gi|522808913|gb|ATVF01000002.1| 372174 372437 3 + 264 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65894.peg.2353 CDS gi|522808913|gb|ATVF01000002.1| 372731 372892 2 + 162 hypothetical protein - none -
fig|6666666.65894.peg.2354 CDS gi|522808913|gb|ATVF01000002.1| 374146 373250 -1 - 897 Mobile element protein - none -
fig|6666666.65894.peg.2355 CDS gi|522808913|gb|ATVF01000002.1| 374436 374143 -3 - 294 Mobile element protein - none -
fig|6666666.65894.peg.2356 CDS gi|522808914|gb|ATVF01000001.1| 1339 338 -1 - 1002 hypothetical protein - none -
fig|6666666.65894.peg.2357 CDS gi|522808914|gb|ATVF01000001.1| 1338 1475 3 + 138 FIG00544217: hypothetical protein - none -
fig|6666666.65894.peg.2358 CDS gi|522808914|gb|ATVF01000001.1| 1763 2659 2 + 897 Universal stress protein family - none -
fig|6666666.65894.peg.2359 CDS gi|522808914|gb|ATVF01000001.1| 3032 3301 2 + 270 FIG00545001: hypothetical protein - none -
fig|6666666.65894.peg.2360 CDS gi|522808914|gb|ATVF01000001.1| 3568 4209 1 + 642 Transcriptional regulator, TetR family - none -
fig|6666666.65894.peg.2361 CDS gi|522808914|gb|ATVF01000001.1| 5519 4206 -2 - 1314 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.65894.peg.2362 CDS gi|522808914|gb|ATVF01000001.1| 5695 6543 1 + 849 FIG054872: Sortase-like protein - none -
fig|6666666.65894.peg.2363 CDS gi|522808914|gb|ATVF01000001.1| 6544 6696 1 + 153 FIG060545: short hypothetical protein - none -
fig|6666666.65894.peg.2364 CDS gi|522808914|gb|ATVF01000001.1| 7133 6693 -2 - 441 FIG00544353: hypothetical protein - none -
fig|6666666.65894.peg.2365 CDS gi|522808914|gb|ATVF01000001.1| 7174 8520 1 + 1347 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65894.peg.2366 CDS gi|522808914|gb|ATVF01000001.1| 8660 9298 2 + 639 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65894.peg.2367 CDS gi|522808914|gb|ATVF01000001.1| 10007 9372 -2 - 636 FIG071084: hypothetical protein - none -
fig|6666666.65894.peg.2368 CDS gi|522808914|gb|ATVF01000001.1| 10183 11640 1 + 1458 FIG00544355: hypothetical protein - none -
fig|6666666.65894.peg.2369 CDS gi|522808914|gb|ATVF01000001.1| 13196 11604 -2 - 1593 FIG00544207: hypothetical protein - none -
fig|6666666.65894.peg.2370 CDS gi|522808914|gb|ATVF01000001.1| 14640 13336 -3 - 1305 putative transport protein - none -
fig|6666666.65894.peg.2371 CDS gi|522808914|gb|ATVF01000001.1| 14667 15581 3 + 915 putative transcription regulator - none -
fig|6666666.65894.peg.2372 CDS gi|522808914|gb|ATVF01000001.1| 15647 17044 2 + 1398 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.65894.peg.2373 CDS gi|522808914|gb|ATVF01000001.1| 17037 17732 3 + 696 Potassium uptake protein, integral membrane component, KtrA - none -
fig|6666666.65894.peg.2374 CDS gi|522808914|gb|ATVF01000001.1| 18448 17846 -1 - 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65894.peg.2375 CDS gi|522808914|gb|ATVF01000001.1| 18765 19427 3 + 663 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65894.peg.2376 CDS gi|522808914|gb|ATVF01000001.1| 19481 20710 2 + 1230 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65894.peg.2377 CDS gi|522808914|gb|ATVF01000001.1| 22005 20743 -3 - 1263 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.65894.peg.2378 CDS gi|522808914|gb|ATVF01000001.1| 23244 22048 -3 - 1197 putative transport protein - none -
fig|6666666.65894.peg.2379 CDS gi|522808914|gb|ATVF01000001.1| 23990 23565 -2 - 426 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.65894.peg.2380 CDS gi|522808914|gb|ATVF01000001.1| 24974 23994 -2 - 981 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.65894.peg.2381 CDS gi|522808914|gb|ATVF01000001.1| 25864 25076 -1 - 789 FIG00547443: hypothetical protein - none -
fig|6666666.65894.peg.2382 CDS gi|522808914|gb|ATVF01000001.1| 26553 25861 -3 - 693 Lactate-responsive regulator LldR in Actinobacteria, GntR family Lactate utilization
fig|6666666.65894.peg.2383 CDS gi|522808914|gb|ATVF01000001.1| 27121 26576 -1 - 546 FIG00548635: hypothetical protein - none -
fig|6666666.65894.peg.2384 CDS gi|522808914|gb|ATVF01000001.1| 27911 27273 -2 - 639 FIG00547651: hypothetical protein - none -
fig|6666666.65894.peg.2385 CDS gi|522808914|gb|ATVF01000001.1| 29458 27923 -1 - 1536 Predicted membrane protein (DUF2319) - none -
fig|6666666.65894.peg.2386 CDS gi|522808914|gb|ATVF01000001.1| 29858 30805 2 + 948 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate
fig|6666666.65894.peg.2387 CDS gi|522808914|gb|ATVF01000001.1| 31082 32935 2 + 1854 Pyruvate kinase family protein - none -
fig|6666666.65894.peg.2388 CDS gi|522808914|gb|ATVF01000001.1| 33046 34299 1 + 1254 putative metal ion transport protein - none -
fig|6666666.65894.peg.2389 CDS gi|522808914|gb|ATVF01000001.1| 35831 34371 -2 - 1461 L-asparagine permease - none -
fig|6666666.65894.peg.2390 CDS gi|522808914|gb|ATVF01000001.1| 37258 35852 -1 - 1407 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65894.peg.2391 CDS gi|522808914|gb|ATVF01000001.1| 37664 37269 -2 - 396 Hypothetical protein of L-Asparaginase type 2-like superfamily - none -
fig|6666666.65894.peg.2392 CDS gi|522808914|gb|ATVF01000001.1| 38237 37707 -2 - 531 Hypothetical protein of L-Asparaginase type 2-like superfamily - none -
fig|6666666.65894.peg.2393 CDS gi|522808914|gb|ATVF01000001.1| 38902 38234 -1 - 669 Transcriptional regulator, GntR family - none -
fig|6666666.65894.peg.2394 CDS gi|522808914|gb|ATVF01000001.1| 39240 40001 3 + 762 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65894.peg.2395 CDS gi|522808914|gb|ATVF01000001.1| 39979 40899 1 + 921 FIG00544431: hypothetical protein - none -
fig|6666666.65894.peg.2396 CDS gi|522808914|gb|ATVF01000001.1| 42178 40967 -1 - 1212 hypothetical protein - none -
fig|6666666.65894.peg.2397 CDS gi|522808914|gb|ATVF01000001.1| 42860 42486 -2 - 375 hypothetical protein - none -
fig|6666666.65894.peg.2398 CDS gi|522808914|gb|ATVF01000001.1| 43870 43004 -1 - 867 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65894.peg.2399 CDS gi|522808914|gb|ATVF01000001.1| 44016 43885 -3 - 132 hypothetical protein - none -
fig|6666666.65894.peg.2400 CDS gi|522808914|gb|ATVF01000001.1| 44361 44248 -3 - 114 hypothetical protein - none -
fig|6666666.65894.peg.2401 CDS gi|522808914|gb|ATVF01000001.1| 45144 44362 -3 - 783 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65894.peg.2402 CDS gi|522808914|gb|ATVF01000001.1| 46320 45565 -3 - 756 Putative conserved integral membrane protein - none -
fig|6666666.65894.peg.2403 CDS gi|522808914|gb|ATVF01000001.1| 47456 46317 -2 - 1140 putative amidase - none -
fig|6666666.65894.peg.2404 CDS gi|522808914|gb|ATVF01000001.1| 47496 48440 3 + 945 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65894.peg.2405 CDS gi|522808914|gb|ATVF01000001.1| 48447 49121 3 + 675 putative phosphoglycerate mutase - none -
fig|6666666.65894.peg.2406 CDS gi|522808914|gb|ATVF01000001.1| 49471 49127 -1 - 345 FIG00544953: hypothetical protein - none -
fig|6666666.65894.peg.2407 CDS gi|522808914|gb|ATVF01000001.1| 50613 49468 -3 - 1146 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65894.peg.2408 CDS gi|522808914|gb|ATVF01000001.1| 51449 50634 -2 - 816 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.65894.peg.2409 CDS gi|522808914|gb|ATVF01000001.1| 51581 52840 2 + 1260 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65894.peg.2410 CDS gi|522808914|gb|ATVF01000001.1| 52852 53751 1 + 900 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2411 CDS gi|522808914|gb|ATVF01000001.1| 53748 54584 3 + 837 hypothetical protein - none -
fig|6666666.65894.peg.2412 CDS gi|522808914|gb|ATVF01000001.1| 54620 56149 2 + 1530 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2413 CDS gi|522808914|gb|ATVF01000001.1| 56488 57813 1 + 1326 oxidoreductase - none -
fig|6666666.65894.peg.2414 CDS gi|522808914|gb|ATVF01000001.1| 57830 58306 2 + 477 hypothetical protein - none -
fig|6666666.65894.peg.2415 CDS gi|522808914|gb|ATVF01000001.1| 58306 59064 1 + 759 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.65894.peg.2416 CDS gi|522808914|gb|ATVF01000001.1| 61232 59109 -2 - 2124 FIG00544841: hypothetical protein - none -
fig|6666666.65894.peg.2417 CDS gi|522808914|gb|ATVF01000001.1| 61608 62813 3 + 1206 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65894.peg.2418 CDS gi|522808914|gb|ATVF01000001.1| 64717 62903 -1 - 1815 Flavin-containing monooxygenase - none -
fig|6666666.65894.peg.2419 CDS gi|522808914|gb|ATVF01000001.1| 64822 64941 1 + 120 hypothetical protein - none -
fig|6666666.65894.peg.2420 CDS gi|522808914|gb|ATVF01000001.1| 65020 65538 1 + 519 Membrane-associated phospholipid phosphatase - none -
fig|6666666.65894.peg.2421 CDS gi|522808914|gb|ATVF01000001.1| 66888 65491 -3 - 1398 FIG00545828: hypothetical protein - none -
fig|6666666.65894.peg.2422 CDS gi|522808914|gb|ATVF01000001.1| 67221 69191 3 + 1971 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65894.peg.2423 CDS gi|522808914|gb|ATVF01000001.1| 69181 69687 1 + 507 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65894.peg.2424 CDS gi|522808914|gb|ATVF01000001.1| 69684 70685 3 + 1002 putative membrane protein - none -
fig|6666666.65894.peg.2425 CDS gi|522808914|gb|ATVF01000001.1| 70823 73003 2 + 2181 hypothetical protein Rv3805c - none -
fig|6666666.65894.peg.2426 CDS gi|522808914|gb|ATVF01000001.1| 73154 74179 2 + 1026 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65894.peg.2427 CDS gi|522808914|gb|ATVF01000001.1| 74672 76639 2 + 1968 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65894.peg.2428 CDS gi|522808914|gb|ATVF01000001.1| 76642 77169 1 + 528 hypothetical protein - none -
fig|6666666.65894.peg.2429 CDS gi|522808914|gb|ATVF01000001.1| 77173 78093 1 + 921 hypothetical protein Rv3802c - none -
fig|6666666.65894.peg.2430 CDS gi|522808914|gb|ATVF01000001.1| 78284 80146 2 + 1863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.65894.peg.2431 CDS gi|522808914|gb|ATVF01000001.1| 80416 85209 1 + 4794 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65894.peg.2432 CDS gi|522808914|gb|ATVF01000001.1| 85230 86780 3 + 1551 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65894.peg.2433 CDS gi|522808914|gb|ATVF01000001.1| 87547 87182 -1 - 366 FIG00544939: hypothetical protein - none -
fig|6666666.65894.peg.2434 CDS gi|522808914|gb|ATVF01000001.1| 88626 87544 -3 - 1083 Possible membrane protein - none -
fig|6666666.65894.peg.2435 CDS gi|522808914|gb|ATVF01000001.1| 90931 88631 -1 - 2301 putative integral membrane protein - none -
fig|6666666.65894.peg.2436 CDS gi|522808914|gb|ATVF01000001.1| 91625 90939 -2 - 687 FIG00546304: hypothetical protein - none -
fig|6666666.65894.peg.2437 CDS gi|522808914|gb|ATVF01000001.1| 92392 91625 -1 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.65894.peg.2438 CDS gi|522808914|gb|ATVF01000001.1| 92792 93940 2 + 1149 hypothetical protein - none -
fig|6666666.65894.peg.2439 CDS gi|522808914|gb|ATVF01000001.1| 94146 94009 -3 - 138 hypothetical protein - none -
fig|6666666.65894.peg.2440 CDS gi|522808914|gb|ATVF01000001.1| 94454 96286 2 + 1833 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65894.peg.2441 CDS gi|522808914|gb|ATVF01000001.1| 96683 96435 -2 - 249 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.65894.peg.2442 CDS gi|522808914|gb|ATVF01000001.1| 97784 97020 -2 - 765 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65894.peg.2443 CDS gi|522808914|gb|ATVF01000001.1| 98374 97781 -1 - 594 FIG00544293: hypothetical protein - none -
fig|6666666.65894.peg.2444 CDS gi|522808914|gb|ATVF01000001.1| 98444 99562 2 + 1119 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65894.peg.2445 CDS gi|522808914|gb|ATVF01000001.1| 100912 99518 -1 - 1395 FIG00547077: hypothetical protein - none -
fig|6666666.65894.peg.2446 CDS gi|522808914|gb|ATVF01000001.1| 101757 100963 -3 - 795 FIG00547859: hypothetical protein - none -
fig|6666666.65894.peg.2447 CDS gi|522808914|gb|ATVF01000001.1| 105863 102789 -2 - 3075 Conserved putative integral membrane protein - none -
fig|6666666.65894.peg.2448 CDS gi|522808914|gb|ATVF01000001.1| 106191 105988 -3 - 204 FIG00543976: hypothetical protein - none -
fig|6666666.65894.peg.2449 CDS gi|522808914|gb|ATVF01000001.1| 106779 106300 -3 - 480 FIG00545938: hypothetical protein - none -
fig|6666666.65894.peg.2450 CDS gi|522808914|gb|ATVF01000001.1| 106913 108064 2 + 1152 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.65894.peg.2451 CDS gi|522808914|gb|ATVF01000001.1| 108208 109824 1 + 1617 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65894.peg.2452 CDS gi|522808914|gb|ATVF01000001.1| 110089 110664 1 + 576 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.65894.peg.2453 CDS gi|522808914|gb|ATVF01000001.1| 110770 112089 1 + 1320 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65894.peg.2454 CDS gi|522808914|gb|ATVF01000001.1| 113345 112086 -2 - 1260 FIG00549506: hypothetical protein - none -
fig|6666666.65894.peg.2455 CDS gi|522808914|gb|ATVF01000001.1| 114864 113416 -3 - 1449 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65894.peg.2456 CDS gi|522808914|gb|ATVF01000001.1| 115133 115912 2 + 780 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65894.peg.2457 CDS gi|522808914|gb|ATVF01000001.1| 115924 116730 1 + 807 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65894.peg.2458 CDS gi|522808914|gb|ATVF01000001.1| 116706 117038 3 + 333 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65894.peg.2459 CDS gi|522808914|gb|ATVF01000001.1| 117089 117238 2 + 150 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism
fig|6666666.65894.peg.2460 CDS gi|522808914|gb|ATVF01000001.1| 117207 118487 3 + 1281 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism
fig|6666666.65894.peg.2461 CDS gi|522808914|gb|ATVF01000001.1| 118521 119303 3 + 783 Beta-glucoside bgl operon antiterminator, BglG family Beta-Glucoside Metabolism
fig|6666666.65894.peg.2462 CDS gi|522808914|gb|ATVF01000001.1| 120025 119396 -1 - 630 conserved hypothetical protein, putative F420-dependent NADP reductase - none -
fig|6666666.65894.peg.2463 CDS gi|522808914|gb|ATVF01000001.1| 120741 120139 -3 - 603 FIG00548305: hypothetical protein - none -
fig|6666666.65894.peg.2464 CDS gi|522808914|gb|ATVF01000001.1| 121422 120829 -3 - 594 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65894.peg.2465 CDS gi|522808914|gb|ATVF01000001.1| 121658 121509 -2 - 150 hypothetical protein - none -
fig|6666666.65894.peg.2466 CDS gi|522808914|gb|ATVF01000001.1| 121662 122522 3 + 861 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.2467 CDS gi|522808914|gb|ATVF01000001.1| 122701 123447 1 + 747 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65894.peg.2468 CDS gi|522808914|gb|ATVF01000001.1| 123489 124097 3 + 609 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.65894.peg.2469 CDS gi|522808914|gb|ATVF01000001.1| 124088 125134 2 + 1047 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.65894.peg.2470 CDS gi|522808914|gb|ATVF01000001.1| 126647 125121 -2 - 1527 FIG00546798: hypothetical protein - none -
fig|6666666.65894.peg.2471 CDS gi|522808914|gb|ATVF01000001.1| 126887 128212 2 + 1326 putative peptidase - none -
fig|6666666.65894.peg.2472 CDS gi|522808914|gb|ATVF01000001.1| 129392 128166 -2 - 1227 FIG00547887: hypothetical protein - none -
fig|6666666.65894.peg.2473 CDS gi|522808914|gb|ATVF01000001.1| 129435 130124 3 + 690 putative ABC transporter - none -
fig|6666666.65894.peg.2474 CDS gi|522808914|gb|ATVF01000001.1| 130121 130846 2 + 726 putative ABC transporter - none -
fig|6666666.65894.peg.2475 CDS gi|522808914|gb|ATVF01000001.1| 130883 131710 2 + 828 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.65894.peg.2476 CDS gi|522808914|gb|ATVF01000001.1| 132125 131718 -2 - 408 hypothetical protein - none -
fig|6666666.65894.peg.2477 CDS gi|522808914|gb|ATVF01000001.1| 132197 132613 2 + 417 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein Alkylphosphonate utilization
fig|6666666.65894.peg.2478 CDS gi|522808914|gb|ATVF01000001.1| 134090 132717 -2 - 1374 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2479 CDS gi|522808914|gb|ATVF01000001.1| 134506 136242 1 + 1737 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2480 CDS gi|522808914|gb|ATVF01000001.1| 136239 136502 3 + 264 Ferredoxin-like protein involved in electron transfer Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2481 CDS gi|522808914|gb|ATVF01000001.1| 136499 137296 2 + 798 Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2482 CDS gi|522808914|gb|ATVF01000001.1| 137275 138207 1 + 933 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2483 CDS gi|522808914|gb|ATVF01000001.1| 138207 139520 3 + 1314 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2484 CDS gi|522808914|gb|ATVF01000001.1| 139633 140358 1 + 726 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.65894.peg.2485 CDS gi|522808914|gb|ATVF01000001.1| 140405 141319 2 + 915 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2486 CDS gi|522808914|gb|ATVF01000001.1| 141987 141853 -3 - 135 hypothetical protein - none -
fig|6666666.65894.peg.2487 CDS gi|522808914|gb|ATVF01000001.1| 141974 144208 2 + 2235 hypothetical protein - none -
fig|6666666.65894.peg.2488 CDS gi|522808914|gb|ATVF01000001.1| 144478 145515 1 + 1038 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2489 CDS gi|522808914|gb|ATVF01000001.1| 147057 145606 -3 - 1452 FIG00544912: hypothetical protein - none -
fig|6666666.65894.peg.2490 CDS gi|522808914|gb|ATVF01000001.1| 147365 149212 2 + 1848 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65894.peg.2491 CDS gi|522808914|gb|ATVF01000001.1| 149212 149859 1 + 648 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65894.peg.2492 CDS gi|522808914|gb|ATVF01000001.1| 150078 151268 3 + 1191 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65894.peg.2493 CDS gi|522808914|gb|ATVF01000001.1| 151332 151769 3 + 438 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65894.peg.2494 CDS gi|522808914|gb|ATVF01000001.1| 152048 153568 2 + 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.2495 CDS gi|522808914|gb|ATVF01000001.1| 154750 153599 -1 - 1152 Uncharacterized protein Rv2079/MT2140 - none -
fig|6666666.65894.peg.2496 CDS gi|522808914|gb|ATVF01000001.1| 154992 154747 -3 - 246 hypothetical protein - none -
fig|6666666.65894.peg.2497 CDS gi|522808914|gb|ATVF01000001.1| 155085 155873 3 + 789 FIG00545709: hypothetical protein - none -
fig|6666666.65894.peg.2498 CDS gi|522808914|gb|ATVF01000001.1| 157036 155870 -1 - 1167 hypothetical protein - none -
fig|6666666.65894.peg.2499 CDS gi|522808914|gb|ATVF01000001.1| 158258 157215 -2 - 1044 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.65894.peg.2500 CDS gi|522808914|gb|ATVF01000001.1| 159514 158354 -1 - 1161 FIG00547297: hypothetical protein - none -
fig|6666666.65894.peg.2501 CDS gi|522808914|gb|ATVF01000001.1| 159713 160510 2 + 798 FIG00549883: hypothetical protein - none -
fig|6666666.65894.peg.2502 CDS gi|522808914|gb|ATVF01000001.1| 160489 161043 1 + 555 FIG00549883: hypothetical protein - none -
fig|6666666.65894.peg.2503 CDS gi|522808914|gb|ATVF01000001.1| 161194 161081 -1 - 114 hypothetical protein - none -
fig|6666666.65894.peg.2504 CDS gi|522808914|gb|ATVF01000001.1| 161424 163982 3 + 2559 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65894.peg.2505 CDS gi|522808914|gb|ATVF01000001.1| 163988 164389 2 + 402 FIG00544891: hypothetical protein - none -
fig|6666666.65894.peg.2506 CDS gi|522808914|gb|ATVF01000001.1| 165796 164390 -1 - 1407 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog - none -
fig|6666666.65894.peg.2507 CDS gi|522808914|gb|ATVF01000001.1| 165964 166689 1 + 726 FIG00545075: hypothetical protein - none -
fig|6666666.65894.peg.2508 CDS gi|522808914|gb|ATVF01000001.1| 166744 167568 1 + 825 Rhodanese-related sulfurtransferase - none -
fig|6666666.65894.peg.2509 CDS gi|522808914|gb|ATVF01000001.1| 167608 169020 1 + 1413 FIG00544840: hypothetical protein - none -
fig|6666666.65894.peg.2510 CDS gi|522808914|gb|ATVF01000001.1| 169158 169712 3 + 555 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.65894.peg.2511 CDS gi|522808914|gb|ATVF01000001.1| 169747 170367 1 + 621 probable RNA methyltransferase - none -
fig|6666666.65894.peg.2512 CDS gi|522808914|gb|ATVF01000001.1| 170524 171711 1 + 1188 fructose-bisphosphate aldolase family protein - none -
fig|6666666.65894.peg.2513 CDS gi|522808914|gb|ATVF01000001.1| 171970 173004 1 + 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65894.peg.2514 CDS gi|522808914|gb|ATVF01000001.1| 173132 174307 2 + 1176 FIG00545517: hypothetical protein - none -
fig|6666666.65894.peg.2515 CDS gi|522808914|gb|ATVF01000001.1| 175041 174304 -3 - 738 FIG00545467: hypothetical protein - none -
fig|6666666.65894.peg.2516 CDS gi|522808914|gb|ATVF01000001.1| 174998 175168 2 + 171 hypothetical protein - none -
fig|6666666.65894.peg.2517 CDS gi|522808914|gb|ATVF01000001.1| 175275 176564 3 + 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65894.peg.2518 CDS gi|522808914|gb|ATVF01000001.1| 176588 176701 2 + 114 hypothetical protein - none -
fig|6666666.65894.peg.2519 CDS gi|522808914|gb|ATVF01000001.1| 176765 177979 2 + 1215 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2520 CDS gi|522808914|gb|ATVF01000001.1| 178608 178060 -3 - 549 FIG00544625: hypothetical protein - none -
fig|6666666.65894.peg.2521 CDS gi|522808914|gb|ATVF01000001.1| 180105 178738 -3 - 1368 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65894.peg.2522 CDS gi|522808914|gb|ATVF01000001.1| 180585 181967 3 + 1383 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.2523 CDS gi|522808914|gb|ATVF01000001.1| 181970 183169 2 + 1200 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.2524 CDS gi|522808914|gb|ATVF01000001.1| 183205 183321 1 + 117 hypothetical protein - none -
fig|6666666.65894.peg.2525 CDS gi|522808914|gb|ATVF01000001.1| 185844 183295 -3 - 2550 serine/threonine protein kinase - none -
fig|6666666.65894.peg.2526 CDS gi|522808914|gb|ATVF01000001.1| 186874 185828 -1 - 1047 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.65894.peg.2527 CDS gi|522808914|gb|ATVF01000001.1| 188426 186876 -2 - 1551 FIG00543876: hypothetical protein - none -
fig|6666666.65894.peg.2528 CDS gi|522808914|gb|ATVF01000001.1| 188627 189154 2 + 528 mutT3 - none -
fig|6666666.65894.peg.2529 CDS gi|522808914|gb|ATVF01000001.1| 189159 190106 3 + 948 putative ABC transporter ATP-binding protein - none -
fig|6666666.65894.peg.2530 CDS gi|522808914|gb|ATVF01000001.1| 190107 190865 3 + 759 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65894.peg.2531 CDS gi|522808914|gb|ATVF01000001.1| 190876 191697 1 + 822 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.65894.peg.2532 CDS gi|522808914|gb|ATVF01000001.1| 193004 191694 -2 - 1311 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.65894.peg.2533 CDS gi|522808914|gb|ATVF01000001.1| 193283 194479 2 + 1197 permeases of the major facilitator superfamily - none -
fig|6666666.65894.peg.2534 CDS gi|522808914|gb|ATVF01000001.1| 196010 194493 -2 - 1518 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65894.peg.2535 CDS gi|522808914|gb|ATVF01000001.1| 196806 196015 -3 - 792 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65894.peg.2536 CDS gi|522808914|gb|ATVF01000001.1| 197854 196898 -1 - 957 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65894.peg.2537 CDS gi|522808914|gb|ATVF01000001.1| 198485 197904 -2 - 582 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65894.peg.2538 CDS gi|522808914|gb|ATVF01000001.1| 198502 198714 1 + 213 FIG00544061: hypothetical protein - none -
fig|6666666.65894.peg.2539 CDS gi|522808914|gb|ATVF01000001.1| 198720 199385 3 + 666 FIG00544658: hypothetical protein - none -
fig|6666666.65894.peg.2540 CDS gi|522808914|gb|ATVF01000001.1| 199439 200575 2 + 1137 Carboxylate-amine ligase - none -
fig|6666666.65894.peg.2541 CDS gi|522808914|gb|ATVF01000001.1| 200577 201179 3 + 603 hypothetical protein - none -
fig|6666666.65894.peg.2542 CDS gi|522808914|gb|ATVF01000001.1| 202407 201193 -3 - 1215 Manganese transport protein MntH - none -
fig|6666666.65894.peg.2543 CDS gi|522808914|gb|ATVF01000001.1| 202962 202582 -3 - 381 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65894.peg.2544 CDS gi|522808914|gb|ATVF01000001.1| 203238 202963 -3 - 276 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65894.peg.2545 CDS gi|522808914|gb|ATVF01000001.1| 203751 203242 -3 - 510 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65894.peg.2546 CDS gi|522808914|gb|ATVF01000001.1| 205517 203748 -2 - 1770 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65894.peg.2547 CDS gi|522808914|gb|ATVF01000001.1| 206001 205510 -3 - 492 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65894.peg.2548 CDS gi|522808914|gb|ATVF01000001.1| 209079 206002 -3 - 3078 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65894.peg.2549 CDS gi|522808914|gb|ATVF01000001.1| 210029 209469 -2 - 561 Acetyl-CoA acetyltransferase - none -
fig|6666666.65894.peg.2550 CDS gi|522808914|gb|ATVF01000001.1| 211731 210358 -3 - 1374 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65894.peg.2551 CDS gi|522808914|gb|ATVF01000001.1| 211993 212547 1 + 555 hypothetical membrane protein - none -
fig|6666666.65894.peg.2552 CDS gi|522808914|gb|ATVF01000001.1| 212556 215303 3 + 2748 FIG00544348: hypothetical protein - none -
fig|6666666.65894.peg.2553 CDS gi|522808914|gb|ATVF01000001.1| 215380 218976 1 + 3597 FIG00545953: hypothetical protein - none -
fig|6666666.65894.peg.2554 CDS gi|522808914|gb|ATVF01000001.1| 218976 221780 3 + 2805 hypothetical protein - none -
fig|6666666.65894.peg.2555 CDS gi|522808914|gb|ATVF01000001.1| 221781 223982 3 + 2202 FIG01262165: hypothetical protein - none -
fig|6666666.65894.peg.2556 CDS gi|522808914|gb|ATVF01000001.1| 223997 225958 2 + 1962 FIG00549493: hypothetical protein - none -
fig|6666666.65894.peg.2557 CDS gi|522808914|gb|ATVF01000001.1| 225958 226962 1 + 1005 hypothetical protein - none -
fig|6666666.65894.peg.2558 CDS gi|522808914|gb|ATVF01000001.1| 226959 228281 3 + 1323 FIG00546445: hypothetical protein - none -
fig|6666666.65894.peg.2559 CDS gi|522808914|gb|ATVF01000001.1| 228278 228559 2 + 282 hypothetical protein - none -
fig|6666666.65894.peg.2560 CDS gi|522808914|gb|ATVF01000001.1| 228707 228564 -2 - 144 hypothetical protein - none -
fig|6666666.65894.peg.2561 CDS gi|522808914|gb|ATVF01000001.1| 228884 230527 2 + 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65894.peg.2562 CDS gi|522808914|gb|ATVF01000001.1| 231014 231187 2 + 174 hypothetical protein - none -
fig|6666666.65894.peg.2563 CDS gi|522808914|gb|ATVF01000001.1| 231268 231405 1 + 138 hypothetical protein - none -
fig|6666666.65894.peg.2564 CDS gi|522808914|gb|ATVF01000001.1| 231522 232433 3 + 912 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65894.peg.2565 CDS gi|522808914|gb|ATVF01000001.1| 234692 232530 -2 - 2163 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65894.peg.2566 CDS gi|522808914|gb|ATVF01000001.1| 235991 236836 2 + 846 hypothetical protein - none -
fig|6666666.65894.peg.2567 CDS gi|522808914|gb|ATVF01000001.1| 239269 237767 -1 - 1503 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65894.peg.2568 CDS gi|522808914|gb|ATVF01000001.1| 239369 240418 2 + 1050 hypothetical protein - none -
fig|6666666.65894.peg.2569 CDS gi|522808914|gb|ATVF01000001.1| 240451 240573 1 + 123 hypothetical protein - none -
fig|6666666.65894.peg.2570 CDS gi|522808914|gb|ATVF01000001.1| 240606 242186 3 + 1581 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.2571 CDS gi|522808914|gb|ATVF01000001.1| 242541 242353 -3 - 189 hypothetical protein - none -
fig|6666666.65894.peg.2572 CDS gi|522808914|gb|ATVF01000001.1| 242768 242547 -2 - 222 hypothetical protein - none -
fig|6666666.65894.peg.2573 CDS gi|522808914|gb|ATVF01000001.1| 243038 244282 2 + 1245 hypothetical protein - none -
fig|6666666.65894.peg.2574 CDS gi|522808914|gb|ATVF01000001.1| 248226 244345 -3 - 3882 putative non-ribosomal peptide synthetase - none -
fig|6666666.65894.peg.2575 CDS gi|522808914|gb|ATVF01000001.1| 248681 248235 -2 - 447 Transcriptional regulator, MarR family - none -
fig|6666666.65894.peg.2576 CDS gi|522808914|gb|ATVF01000001.1| 249138 248848 -3 - 291 rhodanese-related sulfurtransferase - none -
fig|6666666.65894.peg.2577 CDS gi|522808914|gb|ATVF01000001.1| 249482 251452 2 + 1971 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65894.peg.2578 CDS gi|522808914|gb|ATVF01000001.1| 251532 252974 3 + 1443 Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65894.peg.2579 CDS gi|522808914|gb|ATVF01000001.1| 252983 253861 2 + 879 Beta-glucoside bgl operon antiterminator, BglG family Beta-Glucoside Metabolism
fig|6666666.65894.peg.2580 CDS gi|522808914|gb|ATVF01000001.1| 253900 254508 1 + 609 Possible membrane protein - none -
fig|6666666.65894.peg.2581 CDS gi|522808914|gb|ATVF01000001.1| 254563 255009 1 + 447 FIG00547633: hypothetical protein - none -
fig|6666666.65894.peg.2582 CDS gi|522808914|gb|ATVF01000001.1| 255006 255419 3 + 414 FIG00544957: hypothetical protein - none -
fig|6666666.65894.peg.2583 CDS gi|522808914|gb|ATVF01000001.1| 255437 255862 2 + 426 Putative ESX-1 secretion system component Rv3877 - none -
fig|6666666.65894.peg.2584 CDS gi|522808914|gb|ATVF01000001.1| 255850 257391 1 + 1542 Spermidine synthase (EC 2.5.1.16) Polyamine Metabolism
fig|6666666.65894.peg.2585 CDS gi|522808914|gb|ATVF01000001.1| 257939 257463 -2 - 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65894.peg.2586 CDS gi|522808914|gb|ATVF01000001.1| 258062 259345 2 + 1284 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65894.peg.2587 CDS gi|522808914|gb|ATVF01000001.1| 259346 260290 2 + 945 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65894.peg.2588 CDS gi|522808914|gb|ATVF01000001.1| 260324 260926 2 + 603 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65894.peg.2589 CDS gi|522808914|gb|ATVF01000001.1| 261082 263601 1 + 2520 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65894.peg.2590 CDS gi|522808914|gb|ATVF01000001.1| 263594 264184 2 + 591 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65894.peg.2591 CDS gi|522808914|gb|ATVF01000001.1| 264227 265039 2 + 813 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65894.peg.2592 CDS gi|522808914|gb|ATVF01000001.1| 265032 265412 3 + 381 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65894.peg.2593 CDS gi|522808914|gb|ATVF01000001.1| 265412 265900 2 + 489 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65894.peg.2594 CDS gi|522808914|gb|ATVF01000001.1| 265905 266372 3 + 468 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65894.peg.2595 CDS gi|522808914|gb|ATVF01000001.1| 266383 267168 1 + 786 FIG00544686: hypothetical protein - none -
fig|6666666.65894.peg.2596 CDS gi|522808914|gb|ATVF01000001.1| 267168 267869 3 + 702 FIG173306: hypothetical protein - none -
fig|6666666.65894.peg.2597 CDS gi|522808914|gb|ATVF01000001.1| 267920 268684 2 + 765 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65894.peg.2598 CDS gi|522808914|gb|ATVF01000001.1| 268725 270311 3 + 1587 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65894.peg.2599 CDS gi|522808914|gb|ATVF01000001.1| 270501 271421 3 + 921 hypothetical protein - none -
fig|6666666.65894.peg.2600 CDS gi|522808914|gb|ATVF01000001.1| 271563 273098 3 + 1536 putative transport protein - none -
fig|6666666.65894.peg.2601 CDS gi|522808914|gb|ATVF01000001.1| 273140 274591 2 + 1452 putative transport protein - none -
fig|6666666.65894.peg.2602 CDS gi|522808914|gb|ATVF01000001.1| 276135 274702 -3 - 1434 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65894.peg.2603 CDS gi|522808914|gb|ATVF01000001.1| 276424 279207 1 + 2784 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65894.peg.2604 CDS gi|522808914|gb|ATVF01000001.1| 279293 279463 2 + 171 hypothetical protein - none -
fig|6666666.65894.peg.2605 CDS gi|522808914|gb|ATVF01000001.1| 280347 279442 -3 - 906 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65894.peg.2606 CDS gi|522808914|gb|ATVF01000001.1| 280426 281019 1 + 594 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.65894.peg.2607 CDS gi|522808914|gb|ATVF01000001.1| 281147 281806 2 + 660 FIG01278852: hypothetical protein - none -
fig|6666666.65894.peg.2608 CDS gi|522808914|gb|ATVF01000001.1| 282979 281894 -1 - 1086 DNA integrity scanning protein disA - none -
fig|6666666.65894.peg.2609 CDS gi|522808914|gb|ATVF01000001.1| 284440 283016 -1 - 1425 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65894.peg.2610 CDS gi|522808914|gb|ATVF01000001.1| 285131 284550 -2 - 582 FIG00544037: hypothetical protein - none -
fig|6666666.65894.peg.2611 CDS gi|522808914|gb|ATVF01000001.1| 285629 286225 2 + 597 CarD-like transcriptional regulator - none -
fig|6666666.65894.peg.2612 CDS gi|522808914|gb|ATVF01000001.1| 286239 287009 3 + 771 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65894.peg.2613 CDS gi|522808914|gb|ATVF01000001.1| 287002 287484 1 + 483 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65894.peg.2614 CDS gi|522808914|gb|ATVF01000001.1| 288303 287494 -3 - 810 ABC-type transporter, ATPase component - none -
fig|6666666.65894.peg.2615 CDS gi|522808914|gb|ATVF01000001.1| 290297 288303 -2 - 1995 FIG00544816: hypothetical protein - none -
fig|6666666.65894.peg.2616 CDS gi|522808914|gb|ATVF01000001.1| 291262 290297 -1 - 966 ABC-type transporter, permease component - none -
fig|6666666.65894.peg.2617 CDS gi|522808914|gb|ATVF01000001.1| 293071 291455 -1 - 1617 Putative transport system secreted protein - none -
fig|6666666.65894.peg.2618 CDS gi|522808914|gb|ATVF01000001.1| 293382 294104 3 + 723 Transcriptional regulator, GntR family - none -
fig|6666666.65894.peg.2619 CDS gi|522808914|gb|ATVF01000001.1| 294094 295302 1 + 1209 FIG00548186: hypothetical protein - none -
fig|6666666.65894.peg.2620 CDS gi|522808914|gb|ATVF01000001.1| 295969 295271 -1 - 699 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) - none -
fig|6666666.65894.peg.2621 CDS gi|522808914|gb|ATVF01000001.1| 296942 296019 -2 - 924 N-acetylmannosamine kinase (EC 2.7.1.60) - none -
fig|6666666.65894.peg.2622 CDS gi|522808914|gb|ATVF01000001.1| 297890 296946 -2 - 945 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65894.peg.2623 CDS gi|522808914|gb|ATVF01000001.1| 298098 299222 3 + 1125 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization
fig|6666666.65894.peg.2624 CDS gi|522808914|gb|ATVF01000001.1| 299223 299987 3 + 765 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization
fig|6666666.65894.peg.2625 CDS gi|522808914|gb|ATVF01000001.1| 300036 301301 3 + 1266 Sucrose-6-phosphate hydrolase (EC 3.2.1.26) - none -
fig|6666666.65894.peg.2626 CDS gi|522808914|gb|ATVF01000001.1| 301469 303448 2 + 1980 PTS system, sucrose-specific IIB component (EC 2.7.1.69) / PTS system, sucrose-specific IIC component (EC 2.7.1.69) / PTS system, sucrose-specific IIA component (EC 2.7.1.69) - none -
fig|6666666.65894.peg.2627 CDS gi|522808914|gb|ATVF01000001.1| 303575 304957 2 + 1383 Cysteinyl-tRNA synthetase (EC 6.1.1.16) Zinc regulated enzymes;
tRNA aminoacylation, Cys
fig|6666666.65894.peg.2628 CDS gi|522808914|gb|ATVF01000001.1| 304992 305933 3 + 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.65894.peg.2629 CDS gi|522808914|gb|ATVF01000001.1| 306873 305992 -3 - 882 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65894.peg.2630 CDS gi|522808914|gb|ATVF01000001.1| 307566 306874 -3 - 693 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65894.peg.2631 CDS gi|522808914|gb|ATVF01000001.1| 308482 307577 -1 - 906 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65894.peg.2632 CDS gi|522808914|gb|ATVF01000001.1| 308598 309698 3 + 1101 Transcriptional regulator, LacI family - none -
fig|6666666.65894.peg.2633 CDS gi|522808914|gb|ATVF01000001.1| 310465 309695 -1 - 771 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65894.peg.2634 CDS gi|522808914|gb|ATVF01000001.1| 311066 310575 -2 - 492 FIG00544334: hypothetical protein - none -
fig|6666666.65894.peg.2635 CDS gi|522808914|gb|ATVF01000001.1| 312516 311053 -3 - 1464 Trehalose-6-phosphate synthase (EC 2.4.1.15) - none -
fig|6666666.65894.peg.2636 CDS gi|522808914|gb|ATVF01000001.1| 312860 312528 -2 - 333 Putative uncharacterized protein - none -
fig|6666666.65894.peg.2637 CDS gi|522808914|gb|ATVF01000001.1| 314479 312944 -1 - 1536 Putative amino acid export carrier protein - none -
fig|6666666.65894.peg.2638 CDS gi|522808914|gb|ATVF01000001.1| 315878 314703 -2 - 1176 Phage integrase - none -
fig|6666666.65894.peg.2639 CDS gi|522808914|gb|ATVF01000001.1| 316264 315914 -1 - 351 hypothetical protein - none -
fig|6666666.65894.peg.2640 CDS gi|522808914|gb|ATVF01000001.1| 316611 316799 3 + 189 hypothetical protein - none -
fig|6666666.65894.peg.2641 CDS gi|522808914|gb|ATVF01000001.1| 316777 317157 1 + 381 hypothetical protein - none -
fig|6666666.65894.peg.2642 CDS gi|522808914|gb|ATVF01000001.1| 317330 317782 2 + 453 hypothetical protein - none -
fig|6666666.65894.peg.2643 CDS gi|522808914|gb|ATVF01000001.1| 318760 319875 1 + 1116 TnpY - none -
fig|6666666.65894.peg.2644 CDS gi|522808914|gb|ATVF01000001.1| 320136 320273 3 + 138 hypothetical protein - none -
fig|6666666.65894.peg.2645 CDS gi|522808914|gb|ATVF01000001.1| 320270 320392 2 + 123 hypothetical protein - none -
fig|6666666.65894.peg.2646 CDS gi|522808914|gb|ATVF01000001.1| 320566 320435 -1 - 132 hypothetical protein - none -
fig|6666666.65894.peg.2647 CDS gi|522808914|gb|ATVF01000001.1| 320961 321644 3 + 684 hypothetical protein - none -
fig|6666666.65894.peg.2648 CDS gi|522808914|gb|ATVF01000001.1| 321747 322151 3 + 405 hypothetical protein - none -
fig|6666666.65894.peg.2649 CDS gi|522808914|gb|ATVF01000001.1| 322720 323580 1 + 861 Ferrous iron transport permease EfeU Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65894.peg.2650 CDS gi|522808914|gb|ATVF01000001.1| 323573 324721 2 + 1149 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65894.peg.2651 CDS gi|522808914|gb|ATVF01000001.1| 324724 325992 1 + 1269 Ferrous iron transport peroxidase EfeB Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65894.peg.2652 CDS gi|522808914|gb|ATVF01000001.1| 326084 326515 2 + 432 hypothetical protein - none -
fig|6666666.65894.peg.2653 CDS gi|522808914|gb|ATVF01000001.1| 326596 327411 1 + 816 hypothetical protein - none -
fig|6666666.65894.peg.2654 CDS gi|522808914|gb|ATVF01000001.1| 328637 327408 -2 - 1230 Permease - none -
fig|6666666.65894.peg.2655 CDS gi|522808914|gb|ATVF01000001.1| 328627 328752 1 + 126 hypothetical protein - none -
fig|6666666.65894.peg.2656 CDS gi|522808914|gb|ATVF01000001.1| 329290 328760 -1 - 531 FIG00548485: hypothetical protein - none -
fig|6666666.65894.peg.2657 CDS gi|522808914|gb|ATVF01000001.1| 330782 329280 -2 - 1503 FIG00544776: hypothetical protein - none -
fig|6666666.65894.peg.2658 CDS gi|522808914|gb|ATVF01000001.1| 330990 332729 3 + 1740 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65894.peg.2659 CDS gi|522808914|gb|ATVF01000001.1| 332726 333760 2 + 1035 METAL-ACTIVATED PYRIDOXAL ENZYME - none -
fig|6666666.65894.peg.2660 CDS gi|522808914|gb|ATVF01000001.1| 333804 334559 3 + 756 FIG00545455: hypothetical protein - none -
fig|6666666.65894.peg.2661 CDS gi|522808914|gb|ATVF01000001.1| 334669 335376 1 + 708 two-component system, response regulator - none -
fig|6666666.65894.peg.2662 CDS gi|522808914|gb|ATVF01000001.1| 335394 336908 3 + 1515 putative sensor kinase - none -
fig|6666666.65894.peg.2663 CDS gi|522808914|gb|ATVF01000001.1| 337175 336978 -2 - 198 hypothetical protein - none -
fig|6666666.65894.peg.2664 CDS gi|522808914|gb|ATVF01000001.1| 337485 337345 -3 - 141 hypothetical protein - none -
fig|6666666.65894.peg.2665 CDS gi|522808914|gb|ATVF01000001.1| 337678 337541 -1 - 138 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.65894.peg.2666 CDS gi|522808914|gb|ATVF01000001.1| 337752 338327 3 + 576 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.65894.peg.2667 CDS gi|522808914|gb|ATVF01000001.1| 338720 338307 -2 - 414 HIT family protein - none -
fig|6666666.65894.peg.2668 CDS gi|522808914|gb|ATVF01000001.1| 338842 340107 1 + 1266 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2669 CDS gi|522808914|gb|ATVF01000001.1| 340136 341287 2 + 1152 Valine--pyruvate aminotransferase (EC 2.6.1.66) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65894.peg.2670 CDS gi|522808914|gb|ATVF01000001.1| 341331 342761 3 + 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65894.peg.2671 CDS gi|522808914|gb|ATVF01000001.1| 343152 343301 3 + 150 hypothetical protein - none -
fig|6666666.65894.peg.2672 CDS gi|522808914|gb|ATVF01000001.1| 343548 344441 3 + 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2673 CDS gi|522808914|gb|ATVF01000001.1| 344711 346834 2 + 2124 Protease II (EC 3.4.21.83) - none -
fig|6666666.65894.peg.2674 CDS gi|522808914|gb|ATVF01000001.1| 347132 348484 2 + 1353 putative sodium:dicarboxylate symporter - none -
fig|6666666.65894.peg.2675 CDS gi|522808914|gb|ATVF01000001.1| 348529 349212 1 + 684 FIG00546625: hypothetical protein - none -
fig|6666666.65894.peg.2676 CDS gi|522808914|gb|ATVF01000001.1| 351864 349261 -3 - 2604 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.65894.peg.2677 CDS gi|522808914|gb|ATVF01000001.1| 352066 352545 1 + 480 Glutathione peroxidase family protein - none -
fig|6666666.65894.peg.2678 CDS gi|522808914|gb|ATVF01000001.1| 352633 352878 1 + 246 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2679 CDS gi|522808914|gb|ATVF01000001.1| 352875 353546 3 + 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2680 CDS gi|522808914|gb|ATVF01000001.1| 353563 355851 1 + 2289 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2681 CDS gi|522808914|gb|ATVF01000001.1| 355965 356744 3 + 780 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.65894.peg.2682 CDS gi|522808914|gb|ATVF01000001.1| 357884 356877 -2 - 1008 acyl-CoA hydrolase - none -
fig|6666666.65894.peg.2683 CDS gi|522808914|gb|ATVF01000001.1| 357922 358299 1 + 378 FIG00544811: hypothetical protein - none -
fig|6666666.65894.peg.2684 CDS gi|522808914|gb|ATVF01000001.1| 358389 359885 3 + 1497 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2685 CDS gi|522808914|gb|ATVF01000001.1| 359959 361035 1 + 1077 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65894.peg.2686 CDS gi|522808914|gb|ATVF01000001.1| 361680 361462 -3 - 219 FIG00544089: hypothetical protein - none -
fig|6666666.65894.peg.2687 CDS gi|522808914|gb|ATVF01000001.1| 363063 361933 -3 - 1131 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65894.peg.2688 CDS gi|522808914|gb|ATVF01000001.1| 363155 364096 2 + 942 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65894.peg.2689 CDS gi|522808914|gb|ATVF01000001.1| 364800 364102 -3 - 699 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65894.peg.2690 CDS gi|522808914|gb|ATVF01000001.1| 364832 365902 2 + 1071 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.65894.peg.2691 CDS gi|522808914|gb|ATVF01000001.1| 366695 365910 -2 - 786 FIG00544976: hypothetical protein - none -
fig|6666666.65894.peg.2692 CDS gi|522808914|gb|ATVF01000001.1| 366755 367633 2 + 879 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65894.peg.2693 CDS gi|522808914|gb|ATVF01000001.1| 367953 369083 3 + 1131 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65894.peg.2694 CDS gi|522808914|gb|ATVF01000001.1| 369219 370286 3 + 1068 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65894.peg.2695 CDS gi|522808914|gb|ATVF01000001.1| 370302 371225 3 + 924 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65894.peg.2696 CDS gi|522808914|gb|ATVF01000001.1| 371268 372041 3 + 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65894.peg.2697 CDS gi|522808914|gb|ATVF01000001.1| 372972 372136 -3 - 837 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65894.peg.2698 CDS gi|522808914|gb|ATVF01000001.1| 374126 372981 -2 - 1146 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65894.peg.2699 CDS gi|522808914|gb|ATVF01000001.1| 374540 376048 2 + 1509 putative coenzyme A transferase - none -
fig|6666666.65894.peg.2700 CDS gi|522808914|gb|ATVF01000001.1| 376743 377180 3 + 438 hypothetical protein - none -
fig|6666666.65894.peg.2701 CDS gi|522808914|gb|ATVF01000001.1| 377344 377222 -1 - 123 hypothetical protein - none -
fig|6666666.65894.peg.2702 CDS gi|522808914|gb|ATVF01000001.1| 377400 378137 3 + 738 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - none -
fig|6666666.65894.peg.2703 CDS gi|522808914|gb|ATVF01000001.1| 378777 379964 3 + 1188 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) TCA Cycle
fig|6666666.65894.peg.2704 CDS gi|522808914|gb|ATVF01000001.1| 379990 380874 1 + 885 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) TCA Cycle
fig|6666666.65894.peg.2705 CDS gi|522808914|gb|ATVF01000001.1| 381289 381582 1 + 294 predicted acetyltransferase - none -
fig|6666666.65894.peg.2706 CDS gi|522808914|gb|ATVF01000001.1| 382195 381647 -1 - 549 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65894.peg.2707 CDS gi|522808914|gb|ATVF01000001.1| 383257 382322 -1 - 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65894.peg.2708 CDS gi|522808914|gb|ATVF01000001.1| 383934 384779 3 + 846 Putative transcriptional regulator - none -
fig|6666666.65894.peg.2709 CDS gi|522808914|gb|ATVF01000001.1| 385410 384808 -3 - 603 Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.65894.peg.2710 CDS gi|522808914|gb|ATVF01000001.1| 385519 386727 1 + 1209 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65894.rna.1 RNA gi|522808865|gb|ATVF01000025.1| 304 1 -1 - 304 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65894.rna.2 RNA gi|522808865|gb|ATVF01000025.1| 1758 715 -3 - 1044 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65894.rna.3 RNA gi|522808870|gb|ATVF01000024.1| 1 2400 1 + 2400 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65894.rna.4 RNA gi|522808886|gb|ATVF01000014.1| 185 305 2 + 121 5S RNA - none -
fig|6666666.65894.rna.5 RNA gi|522808886|gb|ATVF01000014.1| 11998 12070 1 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65894.rna.6 RNA gi|522808886|gb|ATVF01000014.1| 12114 12186 3 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65894.rna.7 RNA gi|522808886|gb|ATVF01000014.1| 41318 41399 2 + 82 tRNA-Leu-TAG - none -
fig|6666666.65894.rna.8 RNA gi|522808886|gb|ATVF01000014.1| 66265 66193 -1 - 73 tRNA-Lys-CTT - none -
fig|6666666.65894.rna.9 RNA gi|522808890|gb|ATVF01000012.1| 33053 32980 -2 - 74 tRNA-Leu-TAA - none -
fig|6666666.65894.rna.10 RNA gi|522808890|gb|ATVF01000012.1| 49620 49691 3 + 72 tRNA-Gln-TTG - none -
fig|6666666.65894.rna.11 RNA gi|522808892|gb|ATVF01000011.1| 206 326 2 + 121 5S RNA - none -
fig|6666666.65894.rna.12 RNA gi|522808892|gb|ATVF01000011.1| 32738 32666 -2 - 73 tRNA-Arg-CCT - none -
fig|6666666.65894.rna.13 RNA gi|522808894|gb|ATVF01000010.1| 102215 102297 2 + 83 tRNA-Tyr-GTA - none -
fig|6666666.65894.rna.14 RNA gi|522808894|gb|ATVF01000010.1| 102575 102647 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.65894.rna.15 RNA gi|522808894|gb|ATVF01000010.1| 102889 102961 1 + 73 tRNA-Thr-GGT - none -
fig|6666666.65894.rna.16 RNA gi|522808894|gb|ATVF01000010.1| 102999 103070 3 + 72 tRNA-Met-CAT - none -
fig|6666666.65894.rna.17 RNA gi|522808894|gb|ATVF01000010.1| 103185 103257 3 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.65894.rna.18 RNA gi|522808899|gb|ATVF01000008.1| 35575 35503 -1 - 73 tRNA-Thr-CGT - none -
fig|6666666.65894.rna.19 RNA gi|522808899|gb|ATVF01000008.1| 68575 68648 1 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.65894.rna.20 RNA gi|522808899|gb|ATVF01000008.1| 108775 108859 1 + 85 tRNA-Pseudo-GGA - none -
fig|6666666.65894.rna.21 RNA gi|522808899|gb|ATVF01000008.1| 119566 119479 -1 - 88 tRNA-Ser-CGA tRNAs
fig|6666666.65894.rna.22 RNA gi|522808899|gb|ATVF01000008.1| 122128 122056 -1 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65894.rna.23 RNA gi|522808899|gb|ATVF01000008.1| 122432 122360 -2 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65894.rna.24 RNA gi|522808899|gb|ATVF01000008.1| 122548 122460 -1 - 89 tRNA-Ser-GCT - none -
fig|6666666.65894.rna.25 RNA gi|522808899|gb|ATVF01000008.1| 124244 124160 -2 - 85 tRNA-Pseudo-TGA - none -
fig|6666666.65894.rna.26 RNA gi|522808899|gb|ATVF01000008.1| 220197 220077 -3 - 121 5S RNA - none -
fig|6666666.65894.rna.27 RNA gi|522808900|gb|ATVF01000007.1| 33437 33365 -2 - 73 tRNA-Val-TAC - none -
fig|6666666.65894.rna.28 RNA gi|522808900|gb|ATVF01000007.1| 47727 47654 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.65894.rna.29 RNA gi|522808900|gb|ATVF01000007.1| 49530 49602 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.65894.rna.30 RNA gi|522808900|gb|ATVF01000007.1| 49752 49824 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.65894.rna.31 RNA gi|522808900|gb|ATVF01000007.1| 190357 190284 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.65894.rna.32 RNA gi|522808900|gb|ATVF01000007.1| 190979 190908 -2 - 72 tRNA-Gly-TCC - none -
fig|6666666.65894.rna.33 RNA gi|522808900|gb|ATVF01000007.1| 221889 221961 3 + 73 tRNA-Arg-TCT - none -
fig|6666666.65894.rna.34 RNA gi|522808900|gb|ATVF01000007.1| 222291 222363 3 + 73 tRNA-His-GTG - none -
fig|6666666.65894.rna.35 RNA gi|522808906|gb|ATVF01000006.1| 137612 137685 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.65894.rna.36 RNA gi|522808906|gb|ATVF01000006.1| 137697 137769 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.65894.rna.37 RNA gi|522808906|gb|ATVF01000006.1| 137912 137985 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.65894.rna.38 RNA gi|522808906|gb|ATVF01000006.1| 139957 140029 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.65894.rna.39 RNA gi|522808906|gb|ATVF01000006.1| 140410 140482 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.65894.rna.40 RNA gi|522808906|gb|ATVF01000006.1| 177858 177941 3 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.65894.rna.41 RNA gi|522808910|gb|ATVF01000005.1| 301 1 -1 - 301 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65894.rna.42 RNA gi|522808910|gb|ATVF01000005.1| 58908 58835 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.65894.rna.43 RNA gi|522808910|gb|ATVF01000005.1| 67082 67009 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.65894.rna.44 RNA gi|522808911|gb|ATVF01000004.1| 1 367 1 + 367 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65894.rna.45 RNA gi|522808911|gb|ATVF01000004.1| 472 592 1 + 121 5S RNA - none -
fig|6666666.65894.rna.46 RNA gi|522808911|gb|ATVF01000004.1| 29573 29500 -2 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.65894.rna.47 RNA gi|522808911|gb|ATVF01000004.1| 104986 105071 1 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.65894.rna.48 RNA gi|522808911|gb|ATVF01000004.1| 105170 105255 2 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.65894.rna.49 RNA gi|522808912|gb|ATVF01000003.1| 43472 43400 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65894.rna.50 RNA gi|522808912|gb|ATVF01000003.1| 43580 43509 -2 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65894.rna.51 RNA gi|522808912|gb|ATVF01000003.1| 43662 43592 -3 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.65894.rna.52 RNA gi|522808912|gb|ATVF01000003.1| 43776 43704 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65894.rna.53 RNA gi|522808912|gb|ATVF01000003.1| 43884 43813 -3 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65894.rna.54 RNA gi|522808912|gb|ATVF01000003.1| 43990 43918 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65894.rna.55 RNA gi|522808912|gb|ATVF01000003.1| 44253 44324 3 + 72 tRNA-Val-CAC tRNAs
fig|6666666.65894.rna.56 RNA gi|522808913|gb|ATVF01000002.1| 62824 62897 1 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.65894.rna.57 RNA gi|522808913|gb|ATVF01000002.1| 117051 116979 -3 - 73 tRNA-Glu-CTC - none -
fig|6666666.65894.rna.58 RNA gi|522808913|gb|ATVF01000002.1| 117941 117869 -2 - 73 tRNA-Glu-CTC - none -
fig|6666666.65894.rna.59 RNA gi|522808913|gb|ATVF01000002.1| 118050 117979 -3 - 72 tRNA-Gln-CTG - none -
fig|6666666.65894.rna.60 RNA gi|522808913|gb|ATVF01000002.1| 118213 118141 -1 - 73 tRNA-Glu-CTC - none -
fig|6666666.65894.rna.61 RNA gi|522808913|gb|ATVF01000002.1| 118322 118251 -2 - 72 tRNA-Gln-CTG - none -
fig|6666666.65894.rna.62 RNA gi|522808913|gb|ATVF01000002.1| 223556 223628 2 + 73 tRNA-Arg-CCG tRNAs
fig|6666666.65894.rna.63 RNA gi|522808914|gb|ATVF01000001.1| 99 219 3 + 121 5S RNA - none -
fig|6666666.65894.rna.64 RNA gi|522808914|gb|ATVF01000001.1| 110001 109931 -3 - 71 tRNA-Gly-CCC tRNAs
fig|6666666.65894.rna.65 RNA gi|522808914|gb|ATVF01000001.1| 314558 314630 2 + 73 tRNA-Thr-TGT - none -
fig|6666666.65894.rna.66 RNA gi|522808914|gb|ATVF01000001.1| 376188 376260 3 + 73 tRNA-Lys-TTT - none -
fig|6666666.65894.rna.67 RNA gi|522808914|gb|ATVF01000001.1| 378300 378372 3 + 73 tRNA-Glu-TTC - none -
fig|6666666.65894.rna.68 RNA gi|522808914|gb|ATVF01000001.1| 378417 378490 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.65894.rna.69 RNA gi|522808914|gb|ATVF01000001.1| 381005 381078 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.65894.rna.70 RNA gi|522808914|gb|ATVF01000001.1| 381111 381183 3 + 73 tRNA-Phe-GAA tRNAs