fig|6666666.65901.peg.1 CDS gi|507574519|emb|CAVS020000046.1| 59 694 2 + 636 Mobile element protein - none -
fig|6666666.65901.peg.2 CDS gi|507574522|emb|CAVS020000045.1| 55 765 1 + 711 Mobile element protein - none -
fig|6666666.65901.peg.3 CDS gi|507574528|emb|CAVS020000043.1| 380 739 2 + 360 hypothetical protein - none -
fig|6666666.65901.peg.4 CDS gi|507574528|emb|CAVS020000043.1| 1147 1731 1 + 585 Mobile element protein - none -
fig|6666666.65901.peg.5 CDS gi|507574531|emb|CAVS020000042.1| 307 1767 1 + 1461 Mobile element protein - none -
fig|6666666.65901.peg.6 CDS gi|507574540|emb|CAVS020000039.1| 2990 1785 -2 - 1206 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65901.peg.7 CDS gi|507574540|emb|CAVS020000039.1| 4340 2991 -2 - 1350 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65901.peg.8 CDS gi|507574540|emb|CAVS020000039.1| 5630 4419 -2 - 1212 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.65901.peg.9 CDS gi|507574540|emb|CAVS020000039.1| 5892 7529 3 + 1638 Mobile element protein - none -
fig|6666666.65901.peg.10 CDS gi|507574540|emb|CAVS020000039.1| 9045 7756 -3 - 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65901.peg.11 CDS gi|507574540|emb|CAVS020000039.1| 9098 9892 2 + 795 hypothetical protein - none -
fig|6666666.65901.peg.12 CDS gi|507574540|emb|CAVS020000039.1| 10220 11086 2 + 867 hypothetical protein - none -
fig|6666666.65901.peg.13 CDS gi|507574540|emb|CAVS020000039.1| 12522 11404 -3 - 1119 FIG00545517: hypothetical protein - none -
fig|6666666.65901.peg.14 CDS gi|507574540|emb|CAVS020000039.1| 13703 12669 -2 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65901.peg.15 CDS gi|507574540|emb|CAVS020000039.1| 14948 13752 -2 - 1197 fructose-bisphosphate aldolase family protein - none -
fig|6666666.65901.peg.16 CDS gi|507574540|emb|CAVS020000039.1| 15842 15180 -2 - 663 probable RNA methyltransferase - none -
fig|6666666.65901.peg.17 CDS gi|507574540|emb|CAVS020000039.1| 16380 15853 -3 - 528 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.18 CDS gi|507574540|emb|CAVS020000039.1| 17018 16386 -2 - 633 Putative secreted protein - none -
fig|6666666.65901.peg.19 CDS gi|507574540|emb|CAVS020000039.1| 17286 17002 -3 - 285 hypothetical protein - none -
fig|6666666.65901.peg.20 CDS gi|507574540|emb|CAVS020000039.1| 18158 17316 -2 - 843 Rhodanese-related sulfurtransferase - none -
fig|6666666.65901.peg.21 CDS gi|507574540|emb|CAVS020000039.1| 18602 18180 -2 - 423 hypothetical protein - none -
fig|6666666.65901.peg.22 CDS gi|507574540|emb|CAVS020000039.1| 18673 19491 1 + 819 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.65901.peg.23 CDS gi|507574540|emb|CAVS020000039.1| 20453 19659 -2 - 795 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65901.peg.24 CDS gi|507574540|emb|CAVS020000039.1| 21576 21782 3 + 207 hypothetical protein - none -
fig|6666666.65901.peg.25 CDS gi|507574540|emb|CAVS020000039.1| 24344 21798 -2 - 2547 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65901.peg.26 CDS gi|507574540|emb|CAVS020000039.1| 24620 25030 2 + 411 hypothetical protein - none -
fig|6666666.65901.peg.27 CDS gi|507574540|emb|CAVS020000039.1| 26369 25041 -2 - 1329 FIG00545970: hypothetical protein - none -
fig|6666666.65901.peg.28 CDS gi|507574540|emb|CAVS020000039.1| 26450 27472 2 + 1023 flavohemoprotein - none -
fig|6666666.65901.peg.29 CDS gi|507574540|emb|CAVS020000039.1| 28292 27462 -2 - 831 FIG00545709: hypothetical protein - none -
fig|6666666.65901.peg.30 CDS gi|507574540|emb|CAVS020000039.1| 28384 28635 1 + 252 hypothetical protein - none -
fig|6666666.65901.peg.31 CDS gi|507574540|emb|CAVS020000039.1| 28750 28625 -1 - 126 hypothetical protein - none -
fig|6666666.65901.peg.32 CDS gi|507574540|emb|CAVS020000039.1| 28836 29777 3 + 942 hypothetical protein - none -
fig|6666666.65901.peg.33 CDS gi|507574540|emb|CAVS020000039.1| 29836 31602 1 + 1767 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65901.peg.34 CDS gi|507574540|emb|CAVS020000039.1| 32172 31762 -3 - 411 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65901.peg.35 CDS gi|507574540|emb|CAVS020000039.1| 33378 32194 -3 - 1185 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65901.peg.36 CDS gi|507574540|emb|CAVS020000039.1| 34219 33524 -1 - 696 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65901.peg.37 CDS gi|507574540|emb|CAVS020000039.1| 36075 34234 -3 - 1842 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65901.peg.38 CDS gi|507574540|emb|CAVS020000039.1| 37840 36320 -1 - 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65901.peg.39 CDS gi|507574540|emb|CAVS020000039.1| 37983 39386 3 + 1404 FIG00544912: hypothetical protein - none -
fig|6666666.65901.peg.40 CDS gi|507574540|emb|CAVS020000039.1| 39431 39955 2 + 525 ThiJ/PfpI family protein - none -
fig|6666666.65901.peg.41 CDS gi|507574540|emb|CAVS020000039.1| 40818 40252 -3 - 567 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.42 CDS gi|507574540|emb|CAVS020000039.1| 41757 40825 -3 - 933 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65901.peg.43 CDS gi|507574540|emb|CAVS020000039.1| 42397 41759 -1 - 639 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.65901.peg.44 CDS gi|507574540|emb|CAVS020000039.1| 43698 42409 -3 - 1290 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65901.peg.45 CDS gi|507574540|emb|CAVS020000039.1| 44612 43698 -2 - 915 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65901.peg.46 CDS gi|507574540|emb|CAVS020000039.1| 45409 44630 -1 - 780 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation;
Inorganic Sulfur Assimilation
fig|6666666.65901.peg.47 CDS gi|507574540|emb|CAVS020000039.1| 45531 45406 -3 - 126 hypothetical protein - none -
fig|6666666.65901.peg.48 CDS gi|507574540|emb|CAVS020000039.1| 47327 45663 -2 - 1665 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.65901.peg.49 CDS gi|507574540|emb|CAVS020000039.1| 47566 48936 1 + 1371 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65901.peg.50 CDS gi|507574540|emb|CAVS020000039.1| 49135 50841 1 + 1707 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65901.peg.51 CDS gi|507574540|emb|CAVS020000039.1| 50838 52790 3 + 1953 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65901.peg.52 CDS gi|507574540|emb|CAVS020000039.1| 52903 54186 1 + 1284 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.65901.peg.53 CDS gi|507574540|emb|CAVS020000039.1| 54199 54570 1 + 372 hypothetical protein - none -
fig|6666666.65901.peg.54 CDS gi|507574540|emb|CAVS020000039.1| 54563 55501 2 + 939 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65901.peg.55 CDS gi|507574540|emb|CAVS020000039.1| 55516 55737 1 + 222 hypothetical protein - none -
fig|6666666.65901.peg.56 CDS gi|507574540|emb|CAVS020000039.1| 55801 56409 1 + 609 FIG00548816: hypothetical protein - none -
fig|6666666.65901.peg.57 CDS gi|507574540|emb|CAVS020000039.1| 56431 57672 1 + 1242 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65901.peg.58 CDS gi|507574540|emb|CAVS020000039.1| 59404 57854 -1 - 1551 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65901.peg.59 CDS gi|507574540|emb|CAVS020000039.1| 60801 59473 -3 - 1329 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65901.peg.60 CDS gi|507574540|emb|CAVS020000039.1| 60992 62203 2 + 1212 hypothetical protein - none -
fig|6666666.65901.peg.61 CDS gi|507574540|emb|CAVS020000039.1| 62805 62242 -3 - 564 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) - none -
fig|6666666.65901.peg.62 CDS gi|507574540|emb|CAVS020000039.1| 63529 62942 -1 - 588 hypothetical protein - none -
fig|6666666.65901.peg.63 CDS gi|507574540|emb|CAVS020000039.1| 63748 64581 1 + 834 hypothetical protein - none -
fig|6666666.65901.peg.64 CDS gi|507574540|emb|CAVS020000039.1| 64731 66254 3 + 1524 hypothetical protein - none -
fig|6666666.65901.peg.65 CDS gi|507574540|emb|CAVS020000039.1| 68016 66301 -3 - 1716 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65901.peg.66 CDS gi|507574540|emb|CAVS020000039.1| 69268 68084 -1 - 1185 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.65901.peg.67 CDS gi|507574540|emb|CAVS020000039.1| 69372 69581 3 + 210 hypothetical protein - none -
fig|6666666.65901.peg.68 CDS gi|507574540|emb|CAVS020000039.1| 69588 72494 3 + 2907 Conserved putative integral membrane protein - none -
fig|6666666.65901.peg.69 CDS gi|507574540|emb|CAVS020000039.1| 72452 73045 2 + 594 hypothetical protein - none -
fig|6666666.65901.peg.70 CDS gi|507574540|emb|CAVS020000039.1| 73491 74144 3 + 654 hypothetical protein - none -
fig|6666666.65901.peg.71 CDS gi|507574540|emb|CAVS020000039.1| 74128 75552 1 + 1425 FIG00547077: hypothetical protein - none -
fig|6666666.65901.peg.72 CDS gi|507574540|emb|CAVS020000039.1| 75715 75951 1 + 237 hypothetical protein - none -
fig|6666666.65901.peg.73 CDS gi|507574540|emb|CAVS020000039.1| 76292 76744 2 + 453 hypothetical protein - none -
fig|6666666.65901.peg.74 CDS gi|507574540|emb|CAVS020000039.1| 77783 76719 -2 - 1065 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65901.peg.75 CDS gi|507574540|emb|CAVS020000039.1| 78154 77780 -1 - 375 hypothetical protein - none -
fig|6666666.65901.peg.76 CDS gi|507574540|emb|CAVS020000039.1| 78455 78165 -2 - 291 hypothetical protein - none -
fig|6666666.65901.peg.77 CDS gi|507574540|emb|CAVS020000039.1| 78509 79234 2 + 726 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65901.peg.78 CDS gi|507574540|emb|CAVS020000039.1| 79215 79361 3 + 147 hypothetical protein - none -
fig|6666666.65901.peg.79 CDS gi|507574540|emb|CAVS020000039.1| 81971 80145 -2 - 1827 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65901.peg.80 CDS gi|507574540|emb|CAVS020000039.1| 82203 83015 3 + 813 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.65901.peg.81 CDS gi|507574540|emb|CAVS020000039.1| 83018 83692 2 + 675 FIG00546304: hypothetical protein - none -
fig|6666666.65901.peg.82 CDS gi|507574540|emb|CAVS020000039.1| 83703 86006 3 + 2304 putative integral membrane protein - none -
fig|6666666.65901.peg.83 CDS gi|507574540|emb|CAVS020000039.1| 86041 86982 1 + 942 probable integral membrane protein - none -
fig|6666666.65901.peg.84 CDS gi|507574540|emb|CAVS020000039.1| 87062 87409 2 + 348 FIG00544939: hypothetical protein - none -
fig|6666666.65901.peg.85 CDS gi|507574540|emb|CAVS020000039.1| 89081 87540 -2 - 1542 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65901.peg.86 CDS gi|507574540|emb|CAVS020000039.1| 93784 89078 -1 - 4707 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65901.peg.87 CDS gi|507574540|emb|CAVS020000039.1| 95637 93820 -3 - 1818 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.88 CDS gi|507574540|emb|CAVS020000039.1| 96630 95674 -3 - 957 hypothetical protein Rv3802c - none -
fig|6666666.65901.peg.89 CDS gi|507574540|emb|CAVS020000039.1| 97155 96655 -3 - 501 hypothetical protein - none -
fig|6666666.65901.peg.90 CDS gi|507574540|emb|CAVS020000039.1| 99110 97155 -2 - 1956 putative esterase - none -
fig|6666666.65901.peg.91 CDS gi|507574540|emb|CAVS020000039.1| 100405 99392 -1 - 1014 putative esterase - none -
fig|6666666.65901.peg.92 CDS gi|507574540|emb|CAVS020000039.1| 102283 100472 -1 - 1812 hypothetical protein Rv3805c - none -
fig|6666666.65901.peg.93 CDS gi|507574540|emb|CAVS020000039.1| 103304 102309 -2 - 996 putative membrane protein - none -
fig|6666666.65901.peg.94 CDS gi|507574540|emb|CAVS020000039.1| 103804 103304 -1 - 501 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65901.peg.95 CDS gi|507574540|emb|CAVS020000039.1| 105743 103794 -2 - 1950 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65901.peg.96 CDS gi|507574540|emb|CAVS020000039.1| 106001 107485 2 + 1485 Sulfate permease Cysteine Biosynthesis
fig|6666666.65901.peg.97 CDS gi|507574540|emb|CAVS020000039.1| 107513 107851 2 + 339 hypothetical protein - none -
fig|6666666.65901.peg.98 CDS gi|507574540|emb|CAVS020000039.1| 107964 108920 3 + 957 Putative ABC transporter, periplasmic iron-siderophore binding protein precursor - none -
fig|6666666.65901.peg.99 CDS gi|507574540|emb|CAVS020000039.1| 109694 108927 -2 - 768 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65901.peg.100 CDS gi|507574540|emb|CAVS020000039.1| 110692 109694 -1 - 999 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.65901.peg.101 CDS gi|507574540|emb|CAVS020000039.1| 111708 110689 -3 - 1020 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65901.peg.102 CDS gi|507574540|emb|CAVS020000039.1| 112551 111715 -3 - 837 FIG00544109: hypothetical protein - none -
fig|6666666.65901.peg.103 CDS gi|507574540|emb|CAVS020000039.1| 114519 112990 -3 - 1530 Na+/H+ antiporter - none -
fig|6666666.65901.peg.104 CDS gi|507574540|emb|CAVS020000039.1| 116619 114907 -3 - 1713 hypothetical protein - none -
fig|6666666.65901.peg.105 CDS gi|507574540|emb|CAVS020000039.1| 117147 116896 -3 - 252 hypothetical protein - none -
fig|6666666.65901.peg.106 CDS gi|507574540|emb|CAVS020000039.1| 118346 117156 -2 - 1191 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65901.peg.107 CDS gi|507574540|emb|CAVS020000039.1| 118506 120464 3 + 1959 FIG00544841: hypothetical protein - none -
fig|6666666.65901.peg.108 CDS gi|507574540|emb|CAVS020000039.1| 120804 120490 -3 - 315 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.109 CDS gi|507574540|emb|CAVS020000039.1| 121949 120858 -2 - 1092 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.110 CDS gi|507574540|emb|CAVS020000039.1| 122549 123235 2 + 687 hypothetical protein - none -
fig|6666666.65901.peg.111 CDS gi|507574540|emb|CAVS020000039.1| 124056 123232 -3 - 825 Putative uncharacterized protein BCG_3875c - none -
fig|6666666.65901.peg.112 CDS gi|507574540|emb|CAVS020000039.1| 124891 124061 -1 - 831 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.113 CDS gi|507574540|emb|CAVS020000039.1| 126144 124891 -3 - 1254 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65901.peg.114 CDS gi|507574540|emb|CAVS020000039.1| 126225 126953 3 + 729 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.65901.peg.115 CDS gi|507574540|emb|CAVS020000039.1| 126963 127994 3 + 1032 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65901.peg.116 CDS gi|507574540|emb|CAVS020000039.1| 127998 128345 3 + 348 FIG00544953: hypothetical protein - none -
fig|6666666.65901.peg.117 CDS gi|507574540|emb|CAVS020000039.1| 129188 128361 -2 - 828 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65901.peg.118 CDS gi|507574540|emb|CAVS020000039.1| 130145 129231 -2 - 915 hypothetical protein - none -
fig|6666666.65901.peg.119 CDS gi|507574540|emb|CAVS020000039.1| 130163 130861 2 + 699 Putative conserved integral membrane protein - none -
fig|6666666.65901.peg.120 CDS gi|507574540|emb|CAVS020000039.1| 130893 132155 3 + 1263 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65901.peg.121 CDS gi|507574540|emb|CAVS020000039.1| 133528 132398 -1 - 1131 SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3) - none -
fig|6666666.65901.peg.122 CDS gi|507574540|emb|CAVS020000039.1| 134884 133562 -1 - 1323 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65901.peg.123 CDS gi|507574540|emb|CAVS020000039.1| 135919 134924 -1 - 996 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65901.peg.124 CDS gi|507574540|emb|CAVS020000039.1| 136873 135920 -1 - 954 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65901.peg.125 CDS gi|507574540|emb|CAVS020000039.1| 138009 137086 -3 - 924 FIG00544431: hypothetical protein - none -
fig|6666666.65901.peg.126 CDS gi|507574540|emb|CAVS020000039.1| 138736 138047 -1 - 690 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65901.peg.127 CDS gi|507574540|emb|CAVS020000039.1| 139503 138745 -3 - 759 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65901.peg.128 CDS gi|507574540|emb|CAVS020000039.1| 139569 141485 3 + 1917 Predicted membrane protein (DUF2319) - none -
fig|6666666.65901.peg.129 CDS gi|507574540|emb|CAVS020000039.1| 142139 141486 -2 - 654 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65901.peg.130 CDS gi|507574540|emb|CAVS020000039.1| 142230 142832 3 + 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65901.peg.131 CDS gi|507574540|emb|CAVS020000039.1| 143013 144188 3 + 1176 putative transport protein - none -
fig|6666666.65901.peg.132 CDS gi|507574540|emb|CAVS020000039.1| 145781 144321 -2 - 1461 FIG00544355: hypothetical protein - none -
fig|6666666.65901.peg.133 CDS gi|507574540|emb|CAVS020000039.1| 145885 146520 1 + 636 FIG071084: hypothetical protein - none -
fig|6666666.65901.peg.134 CDS gi|507574540|emb|CAVS020000039.1| 147163 146525 -1 - 639 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65901.peg.135 CDS gi|507574540|emb|CAVS020000039.1| 148403 147141 -2 - 1263 Hemoglobin-dependent two component system, sensory histidine kinase HrrS - none -
fig|6666666.65901.peg.136 CDS gi|507574540|emb|CAVS020000039.1| 148417 148962 1 + 546 FIG00544353: hypothetical protein - none -
fig|6666666.65901.peg.137 CDS gi|507574540|emb|CAVS020000039.1| 148974 149912 3 + 939 Lysine decarboxylase family - none -
fig|6666666.65901.peg.138 CDS gi|507574540|emb|CAVS020000039.1| 150069 149917 -3 - 153 FIG060545: short hypothetical protein - none -
fig|6666666.65901.peg.139 CDS gi|507574540|emb|CAVS020000039.1| 150869 150072 -2 - 798 FIG054872: Sortase-like protein - none -
fig|6666666.65901.peg.140 CDS gi|507574540|emb|CAVS020000039.1| 151520 150894 -2 - 627 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.141 CDS gi|507574540|emb|CAVS020000039.1| 151902 151633 -3 - 270 FIG00545001: hypothetical protein - none -
fig|6666666.65901.peg.142 CDS gi|507574540|emb|CAVS020000039.1| 152901 152005 -3 - 897 Universal stress protein family - none -
fig|6666666.65901.peg.143 CDS gi|507574540|emb|CAVS020000039.1| 153091 152960 -1 - 132 hypothetical protein - none -
fig|6666666.65901.peg.144 CDS gi|507574540|emb|CAVS020000039.1| 153129 154109 3 + 981 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65901.peg.145 CDS gi|507574543|emb|CAVS020000038.1| 33 632 3 + 600 SclB protein - none -
fig|6666666.65901.peg.146 CDS gi|507574543|emb|CAVS020000038.1| 852 1643 3 + 792 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65901.peg.147 CDS gi|507574543|emb|CAVS020000038.1| 1655 2326 2 + 672 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65901.peg.148 CDS gi|507574543|emb|CAVS020000038.1| 2323 3141 1 + 819 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65901.peg.149 CDS gi|507574543|emb|CAVS020000038.1| 3812 3138 -2 - 675 FIG00546625: hypothetical protein - none -
fig|6666666.65901.peg.150 CDS gi|507574543|emb|CAVS020000038.1| 3954 5429 3 + 1476 hypothetical protein - none -
fig|6666666.65901.peg.151 CDS gi|507574543|emb|CAVS020000038.1| 7507 5426 -1 - 2082 Protease II (EC 3.4.21.83) - none -
fig|6666666.65901.peg.152 CDS gi|507574543|emb|CAVS020000038.1| 8400 7504 -3 - 897 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65901.peg.153 CDS gi|507574543|emb|CAVS020000038.1| 8498 8947 2 + 450 hypothetical protein - none -
fig|6666666.65901.peg.154 CDS gi|507574543|emb|CAVS020000038.1| 10387 8951 -1 - 1437 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65901.peg.155 CDS gi|507574543|emb|CAVS020000038.1| 11682 10384 -3 - 1299 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65901.peg.156 CDS gi|507574543|emb|CAVS020000038.1| 11663 12079 2 + 417 HIT family protein - none -
fig|6666666.65901.peg.157 CDS gi|507574543|emb|CAVS020000038.1| 13433 12057 -2 - 1377 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.65901.peg.158 CDS gi|507574543|emb|CAVS020000038.1| 14145 13438 -3 - 708 two-component system, response regulator - none -
fig|6666666.65901.peg.159 CDS gi|507574543|emb|CAVS020000038.1| 14476 15912 1 + 1437 Putative amino acid export carrier protein - none -
fig|6666666.65901.peg.160 CDS gi|507574543|emb|CAVS020000038.1| 15966 16325 3 + 360 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65901.peg.161 CDS gi|507574543|emb|CAVS020000038.1| 16326 17603 3 + 1278 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.65901.peg.162 CDS gi|507574543|emb|CAVS020000038.1| 17600 17983 2 + 384 hypothetical protein - none -
fig|6666666.65901.peg.163 CDS gi|507574543|emb|CAVS020000038.1| 17980 18675 1 + 696 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65901.peg.164 CDS gi|507574543|emb|CAVS020000038.1| 18657 19427 3 + 771 Bll1128 protein - none -
fig|6666666.65901.peg.165 CDS gi|507574543|emb|CAVS020000038.1| 20334 19402 -3 - 933 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.65901.peg.166 CDS gi|507574543|emb|CAVS020000038.1| 21663 20338 -3 - 1326 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.65901.peg.167 CDS gi|507574543|emb|CAVS020000038.1| 22416 21931 -3 - 486 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65901.peg.168 CDS gi|507574543|emb|CAVS020000038.1| 23885 22413 -2 - 1473 hypothetical protein - none -
fig|6666666.65901.peg.169 CDS gi|507574543|emb|CAVS020000038.1| 24701 24039 -2 - 663 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65901.peg.170 CDS gi|507574543|emb|CAVS020000038.1| 25308 24718 -3 - 591 CarD-like transcriptional regulator - none -
fig|6666666.65901.peg.171 CDS gi|507574543|emb|CAVS020000038.1| 25490 26020 2 + 531 hypothetical protein - none -
fig|6666666.65901.peg.172 CDS gi|507574543|emb|CAVS020000038.1| 26130 27464 3 + 1335 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65901.peg.173 CDS gi|507574543|emb|CAVS020000038.1| 27794 28810 2 + 1017 hypothetical protein - none -
fig|6666666.65901.peg.174 CDS gi|507574543|emb|CAVS020000038.1| 29468 28803 -2 - 666 conserved hypothetical membrane protein - none -
fig|6666666.65901.peg.175 CDS gi|507574543|emb|CAVS020000038.1| 30098 29478 -2 - 621 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.65901.peg.176 CDS gi|507574543|emb|CAVS020000038.1| 30121 30978 1 + 858 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65901.peg.177 CDS gi|507574543|emb|CAVS020000038.1| 31127 30957 -2 - 171 FIG00543978: hypothetical protein - none -
fig|6666666.65901.peg.178 CDS gi|507574543|emb|CAVS020000038.1| 35308 32567 -1 - 2742 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65901.peg.179 CDS gi|507574543|emb|CAVS020000038.1| 35309 35422 2 + 114 hypothetical protein - none -
fig|6666666.65901.peg.180 CDS gi|507574543|emb|CAVS020000038.1| 35594 35439 -2 - 156 hypothetical protein - none -
fig|6666666.65901.peg.181 CDS gi|507574543|emb|CAVS020000038.1| 37426 35735 -1 - 1692 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) - none -
fig|6666666.65901.peg.182 CDS gi|507574543|emb|CAVS020000038.1| 39488 37419 -2 - 2070 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) - none -
fig|6666666.65901.peg.183 CDS gi|507574543|emb|CAVS020000038.1| 41079 39568 -3 - 1512 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65901.peg.184 CDS gi|507574543|emb|CAVS020000038.1| 42355 41096 -1 - 1260 Serine/threonine protein kinase - none -
fig|6666666.65901.peg.185 CDS gi|507574543|emb|CAVS020000038.1| 43167 42376 -3 - 792 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65901.peg.186 CDS gi|507574543|emb|CAVS020000038.1| 43842 43168 -3 - 675 Ketopantoate reductase PanG (EC 1.1.1.169) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65901.peg.187 CDS gi|507574543|emb|CAVS020000038.1| 44688 43870 -3 - 819 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65901.peg.188 CDS gi|507574543|emb|CAVS020000038.1| 45157 44690 -1 - 468 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65901.peg.189 CDS gi|507574543|emb|CAVS020000038.1| 45612 45154 -3 - 459 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65901.peg.190 CDS gi|507574543|emb|CAVS020000038.1| 45987 45616 -3 - 372 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65901.peg.191 CDS gi|507574543|emb|CAVS020000038.1| 46822 45980 -1 - 843 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65901.peg.192 CDS gi|507574543|emb|CAVS020000038.1| 47401 46826 -1 - 576 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.193 CDS gi|507574543|emb|CAVS020000038.1| 49679 47394 -2 - 2286 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65901.peg.194 CDS gi|507574543|emb|CAVS020000038.1| 50290 49691 -1 - 600 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65901.peg.195 CDS gi|507574543|emb|CAVS020000038.1| 50625 50404 -3 - 222 VapC toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.65901.peg.196 CDS gi|507574543|emb|CAVS020000038.1| 50987 50805 -2 - 183 hypothetical protein - none -
fig|6666666.65901.peg.197 CDS gi|507574543|emb|CAVS020000038.1| 52215 51307 -3 - 909 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65901.peg.198 CDS gi|507574543|emb|CAVS020000038.1| 53468 52215 -2 - 1254 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.199 CDS gi|507574543|emb|CAVS020000038.1| 53543 54076 2 + 534 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65901.peg.200 CDS gi|507574543|emb|CAVS020000038.1| 55146 54331 -3 - 816 hypothetical protein - none -
fig|6666666.65901.peg.201 CDS gi|507574543|emb|CAVS020000038.1| 56201 55317 -2 - 885 hypothetical protein - none -
fig|6666666.65901.peg.202 CDS gi|507574543|emb|CAVS020000038.1| 57073 56357 -1 - 717 hypothetical protein - none -
fig|6666666.65901.peg.203 CDS gi|507574543|emb|CAVS020000038.1| 57072 57368 3 + 297 rhodanese-related sulfurtransferase - none -
fig|6666666.65901.peg.204 CDS gi|507574543|emb|CAVS020000038.1| 57487 57861 1 + 375 Transcriptional regulator, MarR family - none -
fig|6666666.65901.peg.205 CDS gi|507574543|emb|CAVS020000038.1| 58955 58017 -2 - 939 hypothetical protein - none -
fig|6666666.65901.peg.206 CDS gi|507574543|emb|CAVS020000038.1| 59237 63031 2 + 3795 putative non-ribosomal peptide synthetase - none -
fig|6666666.65901.peg.207 CDS gi|507574543|emb|CAVS020000038.1| 63164 63036 -2 - 129 hypothetical protein - none -
fig|6666666.65901.peg.208 CDS gi|507574543|emb|CAVS020000038.1| 63720 63538 -3 - 183 hypothetical protein - none -
fig|6666666.65901.peg.209 CDS gi|507574543|emb|CAVS020000038.1| 65679 63907 -3 - 1773 putative phosphohydrolases, Icc family - none -
fig|6666666.65901.peg.210 CDS gi|507574543|emb|CAVS020000038.1| 66699 65800 -3 - 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65901.peg.211 CDS gi|507574543|emb|CAVS020000038.1| 66949 66803 -1 - 147 hypothetical protein - none -
fig|6666666.65901.peg.212 CDS gi|507574543|emb|CAVS020000038.1| 67121 66993 -2 - 129 hypothetical protein - none -
fig|6666666.65901.peg.213 CDS gi|507574543|emb|CAVS020000038.1| 69171 67531 -3 - 1641 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65901.peg.214 CDS gi|507574543|emb|CAVS020000038.1| 69620 70975 2 + 1356 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65901.peg.215 CDS gi|507574543|emb|CAVS020000038.1| 71143 74127 1 + 2985 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65901.peg.216 CDS gi|507574543|emb|CAVS020000038.1| 74128 74622 1 + 495 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65901.peg.217 CDS gi|507574543|emb|CAVS020000038.1| 74612 76420 2 + 1809 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65901.peg.218 CDS gi|507574543|emb|CAVS020000038.1| 76420 76932 1 + 513 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65901.peg.219 CDS gi|507574543|emb|CAVS020000038.1| 76934 77212 2 + 279 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65901.peg.220 CDS gi|507574543|emb|CAVS020000038.1| 77209 77589 1 + 381 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65901.peg.221 CDS gi|507574543|emb|CAVS020000038.1| 78709 77579 -1 - 1131 Putative cytoplasmic protein - none -
fig|6666666.65901.peg.222 CDS gi|507574543|emb|CAVS020000038.1| 80183 79053 -2 - 1131 hypothetical protein - none -
fig|6666666.65901.peg.223 CDS gi|507574543|emb|CAVS020000038.1| 80466 80242 -3 - 225 hypothetical protein - none -
fig|6666666.65901.peg.224 CDS gi|507574543|emb|CAVS020000038.1| 80482 81060 1 + 579 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65901.peg.225 CDS gi|507574543|emb|CAVS020000038.1| 81078 82118 3 + 1041 hypothetical protein - none -
fig|6666666.65901.peg.226 CDS gi|507574543|emb|CAVS020000038.1| 82121 82717 2 + 597 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65901.peg.227 CDS gi|507574543|emb|CAVS020000038.1| 82723 83514 1 + 792 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65901.peg.228 CDS gi|507574543|emb|CAVS020000038.1| 83511 84971 3 + 1461 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.229 CDS gi|507574543|emb|CAVS020000038.1| 86068 85067 -1 - 1002 hypothetical protein - none -
fig|6666666.65901.peg.230 CDS gi|507574543|emb|CAVS020000038.1| 86934 86203 -3 - 732 Putative ABC transport system membrane protein - none -
fig|6666666.65901.peg.231 CDS gi|507574543|emb|CAVS020000038.1| 87868 86927 -1 - 942 putative ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.232 CDS gi|507574543|emb|CAVS020000038.1| 88340 87861 -2 - 480 mutT3 - none -
fig|6666666.65901.peg.233 CDS gi|507574543|emb|CAVS020000038.1| 88378 89763 1 + 1386 FIG00543876: hypothetical protein - none -
fig|6666666.65901.peg.234 CDS gi|507574543|emb|CAVS020000038.1| 89799 90770 3 + 972 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.65901.peg.235 CDS gi|507574543|emb|CAVS020000038.1| 90767 93154 2 + 2388 serine/threonine protein kinase - none -
fig|6666666.65901.peg.236 CDS gi|507574543|emb|CAVS020000038.1| 95617 93179 -1 - 2439 conserved repeat domain - none -
fig|6666666.65901.peg.237 CDS gi|507574543|emb|CAVS020000038.1| 97799 95625 -2 - 2175 contains gram positive anchor domain - none -
fig|6666666.65901.peg.238 CDS gi|507574546|emb|CAVS020000037.1| 1714 206 -1 - 1509 putative coenzyme A transferase - none -
fig|6666666.65901.peg.239 CDS gi|507574546|emb|CAVS020000037.1| 1904 3064 2 + 1161 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65901.peg.240 CDS gi|507574546|emb|CAVS020000037.1| 3149 3823 2 + 675 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65901.peg.241 CDS gi|507574546|emb|CAVS020000037.1| 4666 3890 -1 - 777 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65901.peg.242 CDS gi|507574546|emb|CAVS020000037.1| 5667 4705 -3 - 963 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65901.peg.243 CDS gi|507574546|emb|CAVS020000037.1| 6754 5684 -1 - 1071 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65901.peg.244 CDS gi|507574546|emb|CAVS020000037.1| 8061 6910 -3 - 1152 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65901.peg.245 CDS gi|507574546|emb|CAVS020000037.1| 9098 8226 -2 - 873 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65901.peg.246 CDS gi|507574546|emb|CAVS020000037.1| 9133 9858 1 + 726 hypothetical protein - none -
fig|6666666.65901.peg.247 CDS gi|507574546|emb|CAVS020000037.1| 9851 10519 2 + 669 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65901.peg.248 CDS gi|507574546|emb|CAVS020000037.1| 11412 10516 -3 - 897 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65901.peg.249 CDS gi|507574546|emb|CAVS020000037.1| 11436 12488 3 + 1053 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65901.peg.250 CDS gi|507574546|emb|CAVS020000037.1| 12620 12820 2 + 201 FIG00544089: hypothetical protein - none -
fig|6666666.65901.peg.251 CDS gi|507574546|emb|CAVS020000037.1| 13940 12873 -2 - 1068 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65901.peg.252 CDS gi|507574546|emb|CAVS020000037.1| 15449 13941 -2 - 1509 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65901.peg.253 CDS gi|507574546|emb|CAVS020000037.1| 15854 15474 -2 - 381 hypothetical protein - none -
fig|6666666.65901.peg.254 CDS gi|507574546|emb|CAVS020000037.1| 15879 16886 3 + 1008 acyl-CoA hydrolase - none -
fig|6666666.65901.peg.255 CDS gi|507574546|emb|CAVS020000037.1| 19250 16974 -2 - 2277 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65901.peg.256 CDS gi|507574546|emb|CAVS020000037.1| 19932 19258 -3 - 675 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65901.peg.257 CDS gi|507574546|emb|CAVS020000037.1| 20060 19929 -2 - 132 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65901.peg.258 CDS gi|507574549|emb|CAVS020000036.1| 1443 184 -3 - 1260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65901.peg.259 CDS gi|507574549|emb|CAVS020000036.1| 2328 1480 -3 - 849 Putative transcriptional regulator - none -
fig|6666666.65901.peg.260 CDS gi|507574549|emb|CAVS020000036.1| 2586 3527 3 + 942 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65901.peg.261 CDS gi|507574549|emb|CAVS020000036.1| 3640 4239 1 + 600 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65901.peg.262 CDS gi|507574549|emb|CAVS020000036.1| 4530 4240 -3 - 291 predicted acetyltransferase - none -
fig|6666666.65901.peg.263 CDS gi|507574549|emb|CAVS020000036.1| 7206 4849 -3 - 2358 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65901.peg.264 CDS gi|507574549|emb|CAVS020000036.1| 7489 8076 1 + 588 No significant database matches - none -
fig|6666666.65901.peg.265 CDS gi|507574549|emb|CAVS020000036.1| 9501 8737 -3 - 765 Metal transporter, ZIP family - none -
fig|6666666.65901.peg.266 CDS gi|507574549|emb|CAVS020000036.1| 12957 11698 -3 - 1260 Modification methylase EcoRI (EC 2.1.1.72) - none -
fig|6666666.65901.peg.267 CDS gi|507574552|emb|CAVS020000035.1| 983 57 -2 - 927 Putative exported protein - none -
fig|6666666.65901.peg.268 CDS gi|507574552|emb|CAVS020000035.1| 1006 1980 1 + 975 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65901.peg.269 CDS gi|507574552|emb|CAVS020000035.1| 2022 2621 3 + 600 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65901.peg.270 CDS gi|507574552|emb|CAVS020000035.1| 2646 4178 3 + 1533 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.271 CDS gi|507574552|emb|CAVS020000035.1| 4179 6281 3 + 2103 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65901.peg.272 CDS gi|507574552|emb|CAVS020000035.1| 6300 6890 3 + 591 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.65901.peg.273 CDS gi|507574552|emb|CAVS020000035.1| 6891 7367 3 + 477 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.65901.peg.274 CDS gi|507574552|emb|CAVS020000035.1| 7367 8101 2 + 735 FIG00543922: hypothetical protein - none -
fig|6666666.65901.peg.275 CDS gi|507574552|emb|CAVS020000035.1| 8871 8098 -3 - 774 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.276 CDS gi|507574552|emb|CAVS020000035.1| 9836 8871 -2 - 966 putative amino acid ABC transporter permease protein - none -
fig|6666666.65901.peg.277 CDS gi|507574552|emb|CAVS020000035.1| 10738 9839 -1 - 900 ABC-type amino acid transport system, secreted component - none -
fig|6666666.65901.peg.278 CDS gi|507574552|emb|CAVS020000035.1| 11490 10855 -3 - 636 hypothetical protein - none -
fig|6666666.65901.peg.279 CDS gi|507574552|emb|CAVS020000035.1| 12721 11513 -1 - 1209 putative transporter - none -
fig|6666666.65901.peg.280 CDS gi|507574552|emb|CAVS020000035.1| 13173 12718 -3 - 456 Transcriptional regulator, MarR family - none -
fig|6666666.65901.peg.281 CDS gi|507574552|emb|CAVS020000035.1| 13761 13258 -3 - 504 hypothetical protein - none -
fig|6666666.65901.peg.282 CDS gi|507574552|emb|CAVS020000035.1| 13970 13761 -2 - 210 COG1476: Predicted transcriptional regulators - none -
fig|6666666.65901.peg.283 CDS gi|507574552|emb|CAVS020000035.1| 14089 14670 1 + 582 hypothetical protein - none -
fig|6666666.65901.peg.284 CDS gi|507574552|emb|CAVS020000035.1| 15740 16006 2 + 267 hypothetical protein - none -
fig|6666666.65901.peg.285 CDS gi|507574552|emb|CAVS020000035.1| 19112 17004 -2 - 2109 hypothetical protein - none -
fig|6666666.65901.peg.286 CDS gi|507574552|emb|CAVS020000035.1| 19252 21909 1 + 2658 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65901.peg.287 CDS gi|507574552|emb|CAVS020000035.1| 23553 22321 -3 - 1233 hypothetical protein - none -
fig|6666666.65901.peg.288 CDS gi|507574552|emb|CAVS020000035.1| 23861 25324 2 + 1464 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.65901.peg.289 CDS gi|507574552|emb|CAVS020000035.1| 25418 26023 2 + 606 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65901.peg.290 CDS gi|507574552|emb|CAVS020000035.1| 26173 26442 1 + 270 hypothetical protein - none -
fig|6666666.65901.peg.291 CDS gi|507574552|emb|CAVS020000035.1| 26509 28608 1 + 2100 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65901.peg.292 CDS gi|507574552|emb|CAVS020000035.1| 28624 29082 1 + 459 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65901.peg.293 CDS gi|507574552|emb|CAVS020000035.1| 29142 29585 3 + 444 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65901.peg.294 CDS gi|507574552|emb|CAVS020000035.1| 31742 29589 -2 - 2154 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65901.peg.295 CDS gi|507574552|emb|CAVS020000035.1| 32859 31819 -3 - 1041 FIG00995839: hypothetical protein - none -
fig|6666666.65901.peg.296 CDS gi|507574552|emb|CAVS020000035.1| 33540 32947 -3 - 594 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65901.peg.297 CDS gi|507574552|emb|CAVS020000035.1| 33626 36484 2 + 2859 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65901.peg.298 CDS gi|507574552|emb|CAVS020000035.1| 36851 37297 2 + 447 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65901.peg.299 CDS gi|507574552|emb|CAVS020000035.1| 37331 37525 2 + 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65901.peg.300 CDS gi|507574552|emb|CAVS020000035.1| 37578 37961 3 + 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65901.peg.301 CDS gi|507574552|emb|CAVS020000035.1| 38377 38096 -1 - 282 hypothetical protein - none -
fig|6666666.65901.peg.302 CDS gi|507574552|emb|CAVS020000035.1| 38688 39377 3 + 690 FIG011178: rRNA methylase RNA methylation
fig|6666666.65901.peg.303 CDS gi|507574552|emb|CAVS020000035.1| 39512 40582 2 + 1071 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65901.peg.304 CDS gi|507574552|emb|CAVS020000035.1| 40597 43104 1 + 2508 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65901.peg.305 CDS gi|507574552|emb|CAVS020000035.1| 43158 44213 3 + 1056 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65901.peg.306 CDS gi|507574552|emb|CAVS020000035.1| 44269 45429 1 + 1161 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.65901.peg.307 CDS gi|507574552|emb|CAVS020000035.1| 45442 46377 1 + 936 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65901.peg.308 CDS gi|507574552|emb|CAVS020000035.1| 46374 47552 3 + 1179 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65901.peg.309 CDS gi|507574552|emb|CAVS020000035.1| 47557 48498 1 + 942 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65901.peg.310 CDS gi|507574552|emb|CAVS020000035.1| 48495 48992 3 + 498 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65901.peg.311 CDS gi|507574552|emb|CAVS020000035.1| 49083 50297 3 + 1215 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65901.peg.312 CDS gi|507574552|emb|CAVS020000035.1| 50301 51737 3 + 1437 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65901.peg.313 CDS gi|507574552|emb|CAVS020000035.1| 52009 52560 1 + 552 hypothetical protein - none -
fig|6666666.65901.peg.314 CDS gi|507574552|emb|CAVS020000035.1| 52557 52916 3 + 360 hypothetical protein - none -
fig|6666666.65901.peg.315 CDS gi|507574552|emb|CAVS020000035.1| 52913 53092 2 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.65901.peg.316 CDS gi|507574552|emb|CAVS020000035.1| 53105 54367 2 + 1263 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65901.peg.317 CDS gi|507574555|emb|CAVS020000034.1| 29 1261 2 + 1233 putative esterase - none -
fig|6666666.65901.peg.318 CDS gi|507574555|emb|CAVS020000034.1| 1371 2552 3 + 1182 Antigen 85-B precursor (85B) (Extracellular alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl transferase 85B) (EC 2.3.1.-) - none -
fig|6666666.65901.peg.319 CDS gi|507574555|emb|CAVS020000034.1| 2632 3693 1 + 1062 Fe3+/thiamine transport system, secreted component; ABC transporter substrate-binding protein - none -
fig|6666666.65901.peg.320 CDS gi|507574555|emb|CAVS020000034.1| 3700 5310 1 + 1611 Ferric iron ABC transporter, permease protein - none -
fig|6666666.65901.peg.321 CDS gi|507574555|emb|CAVS020000034.1| 5310 6359 3 + 1050 putative ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.322 CDS gi|507574555|emb|CAVS020000034.1| 6572 7393 2 + 822 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.65901.peg.323 CDS gi|507574555|emb|CAVS020000034.1| 7439 8866 2 + 1428 hypothetical protein - none -
fig|6666666.65901.peg.324 CDS gi|507574555|emb|CAVS020000034.1| 10891 8939 -1 - 1953 hypothetical protein - none -
fig|6666666.65901.peg.325 CDS gi|507574555|emb|CAVS020000034.1| 11028 12722 3 + 1695 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65901.peg.326 CDS gi|507574555|emb|CAVS020000034.1| 13391 12738 -2 - 654 Transcriptional regulator, IclR family - none -
fig|6666666.65901.peg.327 CDS gi|507574555|emb|CAVS020000034.1| 13486 14907 1 + 1422 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65901.peg.328 CDS gi|507574555|emb|CAVS020000034.1| 14920 15174 1 + 255 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65901.peg.329 CDS gi|507574555|emb|CAVS020000034.1| 15174 15509 3 + 336 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65901.peg.330 CDS gi|507574555|emb|CAVS020000034.1| 15983 15522 -2 - 462 hypothetical protein - none -
fig|6666666.65901.peg.331 CDS gi|507574555|emb|CAVS020000034.1| 16453 15989 -1 - 465 hypothetical protein - none -
fig|6666666.65901.peg.332 CDS gi|507574555|emb|CAVS020000034.1| 17491 16481 -1 - 1011 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65901.peg.333 CDS gi|507574555|emb|CAVS020000034.1| 17594 18592 2 + 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.334 CDS gi|507574555|emb|CAVS020000034.1| 18614 19654 2 + 1041 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65901.peg.335 CDS gi|507574558|emb|CAVS020000033.1| 1132 524 -1 - 609 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.336 CDS gi|507574558|emb|CAVS020000033.1| 1672 1160 -1 - 513 hypothetical protein - none -
fig|6666666.65901.peg.337 CDS gi|507574558|emb|CAVS020000033.1| 3138 1738 -3 - 1401 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65901.peg.338 CDS gi|507574558|emb|CAVS020000033.1| 3242 3916 2 + 675 hypothetical protein - none -
fig|6666666.65901.peg.339 CDS gi|507574558|emb|CAVS020000033.1| 4923 3913 -3 - 1011 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65901.peg.340 CDS gi|507574558|emb|CAVS020000033.1| 5046 5624 3 + 579 FIG00545451: hypothetical protein - none -
fig|6666666.65901.peg.341 CDS gi|507574558|emb|CAVS020000033.1| 5877 5593 -3 - 285 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65901.peg.342 CDS gi|507574558|emb|CAVS020000033.1| 7130 5889 -2 - 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65901.peg.343 CDS gi|507574558|emb|CAVS020000033.1| 7226 8203 2 + 978 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65901.peg.344 CDS gi|507574558|emb|CAVS020000033.1| 8840 8208 -2 - 633 FIG00544176: hypothetical protein - none -
fig|6666666.65901.peg.345 CDS gi|507574558|emb|CAVS020000033.1| 9952 8906 -1 - 1047 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.65901.peg.346 CDS gi|507574558|emb|CAVS020000033.1| 11375 9984 -2 - 1392 FIG00546199: hypothetical protein - none -
fig|6666666.65901.peg.347 CDS gi|507574558|emb|CAVS020000033.1| 11461 12546 1 + 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65901.peg.348 CDS gi|507574558|emb|CAVS020000033.1| 12903 12547 -3 - 357 glyoxalase family protein superfamily - none -
fig|6666666.65901.peg.349 CDS gi|507574558|emb|CAVS020000033.1| 13642 13755 1 + 114 hypothetical protein - none -
fig|6666666.65901.peg.350 CDS gi|507574558|emb|CAVS020000033.1| 14275 13832 -1 - 444 Hypothetical protein YaeJ with similarity to translation release factor Translation termination factors bacterial
fig|6666666.65901.peg.351 CDS gi|507574558|emb|CAVS020000033.1| 15419 14361 -2 - 1059 putative membrane protein - none -
fig|6666666.65901.peg.352 CDS gi|507574558|emb|CAVS020000033.1| 15577 16416 1 + 840 hypothetical protein - none -
fig|6666666.65901.peg.353 CDS gi|507574558|emb|CAVS020000033.1| 16464 17585 3 + 1122 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.65901.peg.354 CDS gi|507574558|emb|CAVS020000033.1| 17670 18395 3 + 726 Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup Encapsulating protein for DyP-type peroxidase and ferritin-like protein oligomers
fig|6666666.65901.peg.355 CDS gi|507574558|emb|CAVS020000033.1| 18408 18746 3 + 339 Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup Encapsulating protein for DyP-type peroxidase and ferritin-like protein oligomers
fig|6666666.65901.peg.356 CDS gi|507574558|emb|CAVS020000033.1| 19019 18729 -2 - 291 hypothetical protein - none -
fig|6666666.65901.peg.357 CDS gi|507574558|emb|CAVS020000033.1| 19759 19031 -1 - 729 hypothetical protein - none -
fig|6666666.65901.peg.358 CDS gi|507574558|emb|CAVS020000033.1| 20430 19756 -3 - 675 Two-component response regulator - none -
fig|6666666.65901.peg.359 CDS gi|507574558|emb|CAVS020000033.1| 20573 21358 2 + 786 Putative membrane protein - none -
fig|6666666.65901.peg.360 CDS gi|507574558|emb|CAVS020000033.1| 21339 22178 3 + 840 hypothetical protein - none -
fig|6666666.65901.peg.361 CDS gi|507574558|emb|CAVS020000033.1| 23158 22175 -1 - 984 hypothetical protein - none -
fig|6666666.65901.peg.362 CDS gi|507574558|emb|CAVS020000033.1| 25311 23326 -3 - 1986 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.65901.peg.363 CDS gi|507574558|emb|CAVS020000033.1| 25924 25382 -1 - 543 hypothetical protein - none -
fig|6666666.65901.peg.364 CDS gi|507574558|emb|CAVS020000033.1| 27482 25950 -2 - 1533 hypothetical protein - none -
fig|6666666.65901.peg.365 CDS gi|507574558|emb|CAVS020000033.1| 28708 27590 -1 - 1119 hypothetical protein - none -
fig|6666666.65901.peg.366 CDS gi|507574558|emb|CAVS020000033.1| 29243 28749 -2 - 495 hypothetical membrane protein - none -
fig|6666666.65901.peg.367 CDS gi|507574558|emb|CAVS020000033.1| 29295 30068 3 + 774 transcriptional regulator, MerR family - none -
fig|6666666.65901.peg.368 CDS gi|507574558|emb|CAVS020000033.1| 30922 30065 -1 - 858 Ku domain protein Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65901.peg.369 CDS gi|507574558|emb|CAVS020000033.1| 30949 33234 1 + 2286 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65901.peg.370 CDS gi|507574558|emb|CAVS020000033.1| 33245 33736 2 + 492 hypothetical protein - none -
fig|6666666.65901.peg.371 CDS gi|507574558|emb|CAVS020000033.1| 33931 33740 -1 - 192 hypothetical protein - none -
fig|6666666.65901.peg.372 CDS gi|507574558|emb|CAVS020000033.1| 34555 35067 1 + 513 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65901.peg.373 CDS gi|507574558|emb|CAVS020000033.1| 36480 35074 -3 - 1407 Drug resistance transporter EmrB/QacA subfamily - none -
fig|6666666.65901.peg.374 CDS gi|507574558|emb|CAVS020000033.1| 37999 36545 -1 - 1455 Putative secreted protein - none -
fig|6666666.65901.peg.375 CDS gi|507574558|emb|CAVS020000033.1| 38566 38147 -1 - 420 Mannose-6-phosphate isomerase - none -
fig|6666666.65901.peg.376 CDS gi|507574558|emb|CAVS020000033.1| 39624 38620 -3 - 1005 hypothetical protein - none -
fig|6666666.65901.peg.377 CDS gi|507574558|emb|CAVS020000033.1| 40602 39694 -3 - 909 Membrane protein, putative - none -
fig|6666666.65901.peg.378 CDS gi|507574558|emb|CAVS020000033.1| 40758 41117 3 + 360 hypothetical protein - none -
fig|6666666.65901.peg.379 CDS gi|507574558|emb|CAVS020000033.1| 41137 41256 1 + 120 hypothetical protein - none -
fig|6666666.65901.peg.380 CDS gi|507574558|emb|CAVS020000033.1| 41253 41870 3 + 618 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65901.peg.381 CDS gi|507574558|emb|CAVS020000033.1| 41871 43217 3 + 1347 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.65901.peg.382 CDS gi|507574558|emb|CAVS020000033.1| 43214 43975 2 + 762 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65901.peg.383 CDS gi|507574558|emb|CAVS020000033.1| 43972 44439 1 + 468 FIG00546937: hypothetical protein - none -
fig|6666666.65901.peg.384 CDS gi|507574558|emb|CAVS020000033.1| 45025 44426 -1 - 600 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65901.peg.385 CDS gi|507574558|emb|CAVS020000033.1| 45345 45022 -3 - 324 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65901.peg.386 CDS gi|507574558|emb|CAVS020000033.1| 46246 45710 -1 - 537 FIG00544603: hypothetical protein - none -
fig|6666666.65901.peg.387 CDS gi|507574558|emb|CAVS020000033.1| 46930 46250 -1 - 681 FIG00544264: hypothetical protein - none -
fig|6666666.65901.peg.388 CDS gi|507574558|emb|CAVS020000033.1| 47087 49003 2 + 1917 GTP-binding protein TypA/BipA - none -
fig|6666666.65901.peg.389 CDS gi|507574558|emb|CAVS020000033.1| 49120 50697 1 + 1578 LpqW - none -
fig|6666666.65901.peg.390 CDS gi|507574558|emb|CAVS020000033.1| 50694 51566 3 + 873 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65901.peg.391 CDS gi|507574558|emb|CAVS020000033.1| 51563 51886 2 + 324 hypothetical membrane protein - none -
fig|6666666.65901.peg.392 CDS gi|507574558|emb|CAVS020000033.1| 51993 52223 3 + 231 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.65901.peg.393 CDS gi|507574558|emb|CAVS020000033.1| 52228 53328 1 + 1101 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.394 CDS gi|507574558|emb|CAVS020000033.1| 53389 53952 1 + 564 FIG00544080: hypothetical protein - none -
fig|6666666.65901.peg.395 CDS gi|507574558|emb|CAVS020000033.1| 54055 55128 1 + 1074 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.396 CDS gi|507574558|emb|CAVS020000033.1| 56580 55606 -3 - 975 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.397 CDS gi|507574558|emb|CAVS020000033.1| 57950 56586 -2 - 1365 Phenylalanine-specific permease - none -
fig|6666666.65901.peg.398 CDS gi|507574558|emb|CAVS020000033.1| 59338 57950 -1 - 1389 Phenylalanine-specific permease - none -
fig|6666666.65901.peg.399 CDS gi|507574558|emb|CAVS020000033.1| 60287 59397 -2 - 891 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.400 CDS gi|507574558|emb|CAVS020000033.1| 60359 61450 2 + 1092 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.401 CDS gi|507574558|emb|CAVS020000033.1| 61454 62239 2 + 786 FIG00543965: hypothetical protein - none -
fig|6666666.65901.peg.402 CDS gi|507574558|emb|CAVS020000033.1| 62232 63083 3 + 852 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.65901.peg.403 CDS gi|507574558|emb|CAVS020000033.1| 63092 63796 2 + 705 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.65901.peg.404 CDS gi|507574558|emb|CAVS020000033.1| 63807 64115 3 + 309 FIG00545506: hypothetical protein - none -
fig|6666666.65901.peg.405 CDS gi|507574558|emb|CAVS020000033.1| 64131 64301 3 + 171 FIG00545868: hypothetical protein - none -
fig|6666666.65901.peg.406 CDS gi|507574558|emb|CAVS020000033.1| 64328 65191 2 + 864 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.65901.peg.407 CDS gi|507574558|emb|CAVS020000033.1| 66595 65195 -1 - 1401 levanase/invertase - none -
fig|6666666.65901.peg.408 CDS gi|507574558|emb|CAVS020000033.1| 67749 66592 -3 - 1158 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.65901.peg.409 CDS gi|507574558|emb|CAVS020000033.1| 67748 69034 2 + 1287 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65901.peg.410 CDS gi|507574558|emb|CAVS020000033.1| 69705 69031 -3 - 675 FIG00945644: hypothetical protein - none -
fig|6666666.65901.peg.411 CDS gi|507574558|emb|CAVS020000033.1| 69782 70375 2 + 594 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65901.peg.412 CDS gi|507574558|emb|CAVS020000033.1| 70385 70765 2 + 381 hypothetical protein - none -
fig|6666666.65901.peg.413 CDS gi|507574558|emb|CAVS020000033.1| 70776 71192 3 + 417 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65901.peg.414 CDS gi|507574558|emb|CAVS020000033.1| 72321 71185 -3 - 1137 Mrp protein homolog - none -
fig|6666666.65901.peg.415 CDS gi|507574558|emb|CAVS020000033.1| 72368 72895 2 + 528 PROBABLE TRANSMEMBRANE PROTEIN - none -
fig|6666666.65901.peg.416 CDS gi|507574558|emb|CAVS020000033.1| 72888 73613 3 + 726 hypothetical protein - none -
fig|6666666.65901.peg.417 CDS gi|507574558|emb|CAVS020000033.1| 77435 73701 -2 - 3735 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65901.peg.418 CDS gi|507574558|emb|CAVS020000033.1| 81086 77559 -2 - 3528 FIG00543822: hypothetical protein - none -
fig|6666666.65901.peg.419 CDS gi|507574558|emb|CAVS020000033.1| 82050 81163 -3 - 888 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.65901.peg.420 CDS gi|507574558|emb|CAVS020000033.1| 82132 83715 1 + 1584 putative esterase - none -
fig|6666666.65901.peg.421 CDS gi|507574558|emb|CAVS020000033.1| 83819 84676 2 + 858 FIG00544678: hypothetical protein - none -
fig|6666666.65901.peg.422 CDS gi|507574558|emb|CAVS020000033.1| 85197 84673 -3 - 525 hypothetical protein - none -
fig|6666666.65901.peg.423 CDS gi|507574558|emb|CAVS020000033.1| 85354 86562 1 + 1209 putative multidrug resistance protein - none -
fig|6666666.65901.peg.424 CDS gi|507574558|emb|CAVS020000033.1| 86559 87563 3 + 1005 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.425 CDS gi|507574558|emb|CAVS020000033.1| 87672 88460 3 + 789 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.426 CDS gi|507574558|emb|CAVS020000033.1| 88466 89164 2 + 699 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.65901.peg.427 CDS gi|507574558|emb|CAVS020000033.1| 89155 90327 1 + 1173 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.65901.peg.428 CDS gi|507574558|emb|CAVS020000033.1| 93553 90536 -1 - 3018 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.65901.peg.429 CDS gi|507574558|emb|CAVS020000033.1| 93942 93553 -3 - 390 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65901.peg.430 CDS gi|507574558|emb|CAVS020000033.1| 94955 93996 -2 - 960 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.65901.peg.431 CDS gi|507574558|emb|CAVS020000033.1| 96476 95073 -2 - 1404 putative gamma-aminobutyrate permease - none -
fig|6666666.65901.peg.432 CDS gi|507574558|emb|CAVS020000033.1| 98250 96901 -3 - 1350 Magnesium citrate secondary transporter - none -
fig|6666666.65901.peg.433 CDS gi|507574558|emb|CAVS020000033.1| 99200 98265 -2 - 936 hypothetical protein - none -
fig|6666666.65901.peg.434 CDS gi|507574558|emb|CAVS020000033.1| 99349 101493 1 + 2145 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65901.peg.435 CDS gi|507574558|emb|CAVS020000033.1| 101537 102313 2 + 777 hypothetical protein - none -
fig|6666666.65901.peg.436 CDS gi|507574558|emb|CAVS020000033.1| 102922 102440 -1 - 483 FIG00544250: hypothetical protein - none -
fig|6666666.65901.peg.437 CDS gi|507574558|emb|CAVS020000033.1| 103555 102956 -1 - 600 FIG00544279: hypothetical protein - none -
fig|6666666.65901.peg.438 CDS gi|507574558|emb|CAVS020000033.1| 105130 103562 -1 - 1569 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65901.peg.439 CDS gi|507574558|emb|CAVS020000033.1| 105387 108401 3 + 3015 Helicase, SNF2/RAD54 family - none -
fig|6666666.65901.peg.440 CDS gi|507574558|emb|CAVS020000033.1| 108394 109212 1 + 819 FIG00545674: hypothetical protein - none -
fig|6666666.65901.peg.441 CDS gi|507574558|emb|CAVS020000033.1| 109270 110421 1 + 1152 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65901.peg.442 CDS gi|507574558|emb|CAVS020000033.1| 110425 113073 1 + 2649 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.65901.peg.443 CDS gi|507574558|emb|CAVS020000033.1| 113085 113558 3 + 474 Transcriptional regulator, MarR family - none -
fig|6666666.65901.peg.444 CDS gi|507574558|emb|CAVS020000033.1| 113648 113878 2 + 231 PspC domain protein - none -
fig|6666666.65901.peg.445 CDS gi|507574558|emb|CAVS020000033.1| 114519 113875 -3 - 645 Polysaccharide deacetylase Polysaccharide deacetylases
fig|6666666.65901.peg.446 CDS gi|507574558|emb|CAVS020000033.1| 114596 114712 2 + 117 hypothetical protein - none -
fig|6666666.65901.peg.447 CDS gi|507574558|emb|CAVS020000033.1| 115751 115077 -2 - 675 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.65901.peg.448 CDS gi|507574558|emb|CAVS020000033.1| 117305 115752 -2 - 1554 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.65901.peg.449 CDS gi|507574558|emb|CAVS020000033.1| 118087 117302 -1 - 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.65901.peg.450 CDS gi|507574558|emb|CAVS020000033.1| 119846 118179 -2 - 1668 L-lactate permease Lactate utilization
fig|6666666.65901.peg.451 CDS gi|507574558|emb|CAVS020000033.1| 119954 121678 2 + 1725 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65901.peg.452 CDS gi|507574558|emb|CAVS020000033.1| 121679 123043 2 + 1365 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.453 CDS gi|507574558|emb|CAVS020000033.1| 123130 124482 1 + 1353 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65901.peg.454 CDS gi|507574558|emb|CAVS020000033.1| 124495 125424 1 + 930 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65901.peg.455 CDS gi|507574558|emb|CAVS020000033.1| 126761 125421 -2 - 1341 hypothetical protein; putative His-Me finger endonuclease domain - none -
fig|6666666.65901.peg.456 CDS gi|507574558|emb|CAVS020000033.1| 127193 129112 2 + 1920 von Willebrand factor type A domain protein - none -
fig|6666666.65901.peg.457 CDS gi|507574558|emb|CAVS020000033.1| 130864 129125 -1 - 1740 acyl-CoA synthetase - none -
fig|6666666.65901.peg.458 CDS gi|507574558|emb|CAVS020000033.1| 131096 132874 2 + 1779 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65901.peg.459 CDS gi|507574558|emb|CAVS020000033.1| 132874 133953 1 + 1080 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.65901.peg.460 CDS gi|507574558|emb|CAVS020000033.1| 133979 134785 2 + 807 Methylase of polypeptide chain release factors - none -
fig|6666666.65901.peg.461 CDS gi|507574558|emb|CAVS020000033.1| 134811 135467 3 + 657 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.65901.peg.462 CDS gi|507574558|emb|CAVS020000033.1| 135474 136637 3 + 1164 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.65901.peg.463 CDS gi|507574558|emb|CAVS020000033.1| 136624 137055 1 + 432 FIG048548: ATP synthase protein I2 - none -
fig|6666666.65901.peg.464 CDS gi|507574558|emb|CAVS020000033.1| 137411 138205 2 + 795 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.465 CDS gi|507574558|emb|CAVS020000033.1| 138303 138548 3 + 246 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.466 CDS gi|507574558|emb|CAVS020000033.1| 138596 139168 2 + 573 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.467 CDS gi|507574558|emb|CAVS020000033.1| 139174 140007 1 + 834 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.468 CDS gi|507574558|emb|CAVS020000033.1| 140017 141681 1 + 1665 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.469 CDS gi|507574558|emb|CAVS020000033.1| 141733 142701 1 + 969 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.470 CDS gi|507574558|emb|CAVS020000033.1| 142705 144216 1 + 1512 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.471 CDS gi|507574558|emb|CAVS020000033.1| 144228 144596 3 + 369 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65901.peg.472 CDS gi|507574558|emb|CAVS020000033.1| 144731 145210 2 + 480 hypothetical protein - none -
fig|6666666.65901.peg.473 CDS gi|507574558|emb|CAVS020000033.1| 145260 145925 3 + 666 FIG00996186: hypothetical protein - none -
fig|6666666.65901.peg.474 CDS gi|507574558|emb|CAVS020000033.1| 145967 146212 2 + 246 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.65901.peg.475 CDS gi|507574558|emb|CAVS020000033.1| 146223 146525 3 + 303 FIG00544011: hypothetical protein - none -
fig|6666666.65901.peg.476 CDS gi|507574558|emb|CAVS020000033.1| 146532 147365 3 + 834 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65901.peg.477 CDS gi|507574558|emb|CAVS020000033.1| 149551 147362 -1 - 2190 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65901.peg.478 CDS gi|507574558|emb|CAVS020000033.1| 151587 149560 -3 - 2028 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.65901.peg.479 CDS gi|507574558|emb|CAVS020000033.1| 151681 152523 1 + 843 ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.480 CDS gi|507574558|emb|CAVS020000033.1| 152573 153418 2 + 846 FIG00996530: hypothetical protein - none -
fig|6666666.65901.peg.481 CDS gi|507574558|emb|CAVS020000033.1| 153408 154547 3 + 1140 SAM-dependent methyltransferase - none -
fig|6666666.65901.peg.482 CDS gi|507574558|emb|CAVS020000033.1| 154558 155667 1 + 1110 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65901.peg.483 CDS gi|507574558|emb|CAVS020000033.1| 155710 156774 1 + 1065 Putative hydrolase - none -
fig|6666666.65901.peg.484 CDS gi|507574558|emb|CAVS020000033.1| 157559 156771 -2 - 789 Spermidine synthase-like protein - none -
fig|6666666.65901.peg.485 CDS gi|507574558|emb|CAVS020000033.1| 157865 157581 -2 - 285 hypothetical protein - none -
fig|6666666.65901.peg.486 CDS gi|507574558|emb|CAVS020000033.1| 159846 157900 -3 - 1947 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65901.peg.487 CDS gi|507574558|emb|CAVS020000033.1| 160275 161294 3 + 1020 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.65901.peg.488 CDS gi|507574558|emb|CAVS020000033.1| 161305 162162 1 + 858 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.65901.peg.489 CDS gi|507574558|emb|CAVS020000033.1| 162204 162542 3 + 339 hypothetical protein - none -
fig|6666666.65901.peg.490 CDS gi|507574558|emb|CAVS020000033.1| 163233 162550 -3 - 684 FIG00544413: hypothetical protein - none -
fig|6666666.65901.peg.491 CDS gi|507574558|emb|CAVS020000033.1| 163295 165322 2 + 2028 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65901.peg.492 CDS gi|507574558|emb|CAVS020000033.1| 166549 165542 -1 - 1008 possible beta-lactamase - none -
fig|6666666.65901.peg.493 CDS gi|507574558|emb|CAVS020000033.1| 167007 166549 -3 - 459 FIG00545064: hypothetical protein - none -
fig|6666666.65901.peg.494 CDS gi|507574558|emb|CAVS020000033.1| 167721 167056 -3 - 666 FIG00544014: hypothetical protein - none -
fig|6666666.65901.peg.495 CDS gi|507574558|emb|CAVS020000033.1| 167804 168943 2 + 1140 putative cytochrome P450 hydroxylase - none -
fig|6666666.65901.peg.496 CDS gi|507574558|emb|CAVS020000033.1| 169012 169311 1 + 300 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65901.peg.497 CDS gi|507574558|emb|CAVS020000033.1| 169318 170799 1 + 1482 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65901.peg.498 CDS gi|507574558|emb|CAVS020000033.1| 170864 172084 2 + 1221 permease of the major facilitator superfamily - none -
fig|6666666.65901.peg.499 CDS gi|507574558|emb|CAVS020000033.1| 172095 173126 3 + 1032 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65901.peg.500 CDS gi|507574558|emb|CAVS020000033.1| 173143 173667 1 + 525 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.65901.peg.501 CDS gi|507574558|emb|CAVS020000033.1| 174428 173625 -2 - 804 hypothetical protein - none -
fig|6666666.65901.peg.502 CDS gi|507574558|emb|CAVS020000033.1| 174952 174428 -1 - 525 hypothetical protein - none -
fig|6666666.65901.peg.503 CDS gi|507574558|emb|CAVS020000033.1| 175031 175498 2 + 468 hypothetical protein - none -
fig|6666666.65901.peg.504 CDS gi|507574558|emb|CAVS020000033.1| 175843 177345 1 + 1503 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65901.peg.505 CDS gi|507574558|emb|CAVS020000033.1| 177594 177710 3 + 117 hypothetical protein - none -
fig|6666666.65901.peg.506 CDS gi|507574558|emb|CAVS020000033.1| 179316 177901 -3 - 1416 FIG00545305: hypothetical protein - none -
fig|6666666.65901.peg.507 CDS gi|507574558|emb|CAVS020000033.1| 179487 179335 -3 - 153 hypothetical protein - none -
fig|6666666.65901.peg.508 CDS gi|507574558|emb|CAVS020000033.1| 179476 180324 1 + 849 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.65901.peg.509 CDS gi|507574558|emb|CAVS020000033.1| 181970 180321 -2 - 1650 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65901.peg.510 CDS gi|507574558|emb|CAVS020000033.1| 182159 181998 -2 - 162 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65901.peg.511 CDS gi|507574558|emb|CAVS020000033.1| 182701 182165 -1 - 537 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65901.peg.512 CDS gi|507574558|emb|CAVS020000033.1| 182981 184804 2 + 1824 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65901.peg.513 CDS gi|507574558|emb|CAVS020000033.1| 184807 185325 1 + 519 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65901.peg.514 CDS gi|507574558|emb|CAVS020000033.1| 185399 186415 2 + 1017 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65901.peg.515 CDS gi|507574558|emb|CAVS020000033.1| 187101 186484 -3 - 618 hypothetical protein - none -
fig|6666666.65901.peg.516 CDS gi|507574558|emb|CAVS020000033.1| 187381 188286 1 + 906 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65901.peg.517 CDS gi|507574558|emb|CAVS020000033.1| 188309 190093 2 + 1785 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.65901.peg.518 CDS gi|507574558|emb|CAVS020000033.1| 190121 190951 2 + 831 Putative lipoprotein - none -
fig|6666666.65901.peg.519 CDS gi|507574558|emb|CAVS020000033.1| 191012 192028 2 + 1017 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65901.peg.520 CDS gi|507574558|emb|CAVS020000033.1| 192039 193487 3 + 1449 FIG00545237: hypothetical protein - none -
fig|6666666.65901.peg.521 CDS gi|507574558|emb|CAVS020000033.1| 193530 195395 3 + 1866 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65901.peg.522 CDS gi|507574558|emb|CAVS020000033.1| 195397 195963 1 + 567 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65901.peg.523 CDS gi|507574558|emb|CAVS020000033.1| 196031 196789 2 + 759 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65901.peg.524 CDS gi|507574558|emb|CAVS020000033.1| 197850 196795 -3 - 1056 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65901.peg.525 CDS gi|507574558|emb|CAVS020000033.1| 198086 199048 2 + 963 hypothetical protein - none -
fig|6666666.65901.peg.526 CDS gi|507574558|emb|CAVS020000033.1| 199347 200771 3 + 1425 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65901.peg.527 CDS gi|507574561|emb|CAVS020000032.1| 476 84 -2 - 393 hypothetical protein - none -
fig|6666666.65901.peg.528 CDS gi|507574561|emb|CAVS020000032.1| 489 1325 3 + 837 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65901.peg.529 CDS gi|507574561|emb|CAVS020000032.1| 1425 2564 3 + 1140 Cell wall-binding protein - none -
fig|6666666.65901.peg.530 CDS gi|507574561|emb|CAVS020000032.1| 2565 3419 3 + 855 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.65901.peg.531 CDS gi|507574561|emb|CAVS020000032.1| 3409 4356 1 + 948 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65901.peg.532 CDS gi|507574561|emb|CAVS020000032.1| 4375 6192 1 + 1818 ABC transporter, ATP-binding protein - none -
fig|6666666.65901.peg.533 CDS gi|507574561|emb|CAVS020000032.1| 6203 6526 2 + 324 FIG00544339: hypothetical protein - none -
fig|6666666.65901.peg.534 CDS gi|507574561|emb|CAVS020000032.1| 6711 7880 3 + 1170 Mn2+/Fe2+ transporter, NRAMP family - none -
fig|6666666.65901.peg.535 CDS gi|507574561|emb|CAVS020000032.1| 7890 8669 3 + 780 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase CBSS-279010.5.peg.587
fig|6666666.65901.peg.536 CDS gi|507574561|emb|CAVS020000032.1| 8767 9846 1 + 1080 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.537 CDS gi|507574561|emb|CAVS020000032.1| 11645 9897 -2 - 1749 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65901.peg.538 CDS gi|507574561|emb|CAVS020000032.1| 13202 11649 -2 - 1554 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) CBSS-279010.5.peg.587;
CBSS-279010.5.peg.587;
EC699-706;
EC699-706
fig|6666666.65901.peg.539 CDS gi|507574561|emb|CAVS020000032.1| 13954 13199 -1 - 756 Lactam utilization protein LamB CBSS-279010.5.peg.587;
EC699-706
fig|6666666.65901.peg.540 CDS gi|507574561|emb|CAVS020000032.1| 14652 14014 -3 - 639 Transcriptional regulator, GntR family - none -
fig|6666666.65901.peg.541 CDS gi|507574561|emb|CAVS020000032.1| 14839 15690 1 + 852 FIG00545275: hypothetical protein - none -
fig|6666666.65901.peg.542 CDS gi|507574561|emb|CAVS020000032.1| 16257 15691 -3 - 567 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.65901.peg.543 CDS gi|507574561|emb|CAVS020000032.1| 17000 16254 -2 - 747 FIG00544241: hypothetical protein - none -
fig|6666666.65901.peg.544 CDS gi|507574561|emb|CAVS020000032.1| 17072 18055 2 + 984 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65901.peg.545 CDS gi|507574561|emb|CAVS020000032.1| 19464 18064 -3 - 1401 hypothetical protein - none -
fig|6666666.65901.peg.546 CDS gi|507574561|emb|CAVS020000032.1| 19855 21306 1 + 1452 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65901.peg.547 CDS gi|507574561|emb|CAVS020000032.1| 21309 21761 3 + 453 hypothetical protein - none -
fig|6666666.65901.peg.548 CDS gi|507574561|emb|CAVS020000032.1| 22869 21739 -3 - 1131 Glycosyltransferase - none -
fig|6666666.65901.peg.549 CDS gi|507574561|emb|CAVS020000032.1| 24066 22870 -3 - 1197 Sulfolipid (UDP-sulfoquinovose) biosynthesis protein - none -
fig|6666666.65901.peg.550 CDS gi|507574561|emb|CAVS020000032.1| 25111 24314 -1 - 798 hypothetical protein - none -
fig|6666666.65901.peg.551 CDS gi|507574561|emb|CAVS020000032.1| 25266 25625 3 + 360 hypothetical protein - none -
fig|6666666.65901.peg.552 CDS gi|507574561|emb|CAVS020000032.1| 26209 25622 -1 - 588 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.553 CDS gi|507574561|emb|CAVS020000032.1| 28578 26212 -3 - 2367 FIG00545740: hypothetical protein - none -
fig|6666666.65901.peg.554 CDS gi|507574561|emb|CAVS020000032.1| 29755 28625 -1 - 1131 COG family: RecA-superfamily ATPases implicated in signal transduction - none -
fig|6666666.65901.peg.555 CDS gi|507574561|emb|CAVS020000032.1| 30050 29865 -2 - 186 hypothetical protein - none -
fig|6666666.65901.peg.556 CDS gi|507574561|emb|CAVS020000032.1| 30176 31681 2 + 1506 Sodium/di- and tricarboxylate cotransporter - none -
fig|6666666.65901.peg.557 CDS gi|507574561|emb|CAVS020000032.1| 33153 31678 -3 - 1476 hypothetical protein - none -
fig|6666666.65901.peg.558 CDS gi|507574561|emb|CAVS020000032.1| 33494 33156 -2 - 339 hypothetical protein - none -
fig|6666666.65901.peg.559 CDS gi|507574561|emb|CAVS020000032.1| 33576 34490 3 + 915 ADP-ribosylglycohydrolase - none -
fig|6666666.65901.peg.560 CDS gi|507574561|emb|CAVS020000032.1| 35537 34476 -2 - 1062 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.561 CDS gi|507574561|emb|CAVS020000032.1| 35681 36793 2 + 1113 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.65901.peg.562 CDS gi|507574561|emb|CAVS020000032.1| 36830 38101 2 + 1272 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65901.peg.563 CDS gi|507574561|emb|CAVS020000032.1| 38098 38766 1 + 669 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65901.peg.564 CDS gi|507574561|emb|CAVS020000032.1| 40384 38753 -1 - 1632 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65901.peg.565 CDS gi|507574561|emb|CAVS020000032.1| 40426 40971 1 + 546 putative reductase - none -
fig|6666666.65901.peg.566 CDS gi|507574561|emb|CAVS020000032.1| 41537 40968 -2 - 570 hypothetical protein - none -
fig|6666666.65901.peg.567 CDS gi|507574561|emb|CAVS020000032.1| 42126 41548 -3 - 579 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65901.peg.568 CDS gi|507574561|emb|CAVS020000032.1| 42173 43042 2 + 870 2-nitropropane dioxygenase (EC 1.13.11.32) - none -
fig|6666666.65901.peg.569 CDS gi|507574561|emb|CAVS020000032.1| 43039 43350 1 + 312 hypothetical protein - none -
fig|6666666.65901.peg.570 CDS gi|507574561|emb|CAVS020000032.1| 44141 43347 -2 - 795 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65901.peg.571 CDS gi|507574561|emb|CAVS020000032.1| 44704 44147 -1 - 558 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65901.peg.572 CDS gi|507574561|emb|CAVS020000032.1| 45426 44779 -3 - 648 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65901.peg.573 CDS gi|507574561|emb|CAVS020000032.1| 46895 45561 -2 - 1335 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65901.peg.574 CDS gi|507574561|emb|CAVS020000032.1| 47901 46885 -3 - 1017 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65901.peg.575 CDS gi|507574561|emb|CAVS020000032.1| 49190 47898 -2 - 1293 Aromatic amino acid transport protein AroP - none -
fig|6666666.65901.peg.576 CDS gi|507574561|emb|CAVS020000032.1| 49703 49257 -2 - 447 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.65901.peg.577 CDS gi|507574561|emb|CAVS020000032.1| 50760 49783 -3 - 978 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.65901.peg.578 CDS gi|507574561|emb|CAVS020000032.1| 52207 50765 -1 - 1443 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65901.peg.579 CDS gi|507574561|emb|CAVS020000032.1| 53494 52268 -1 - 1227 Putative membrane protein - none -
fig|6666666.65901.peg.580 CDS gi|507574561|emb|CAVS020000032.1| 53551 55041 1 + 1491 Multicopper oxidase Copper homeostasis
fig|6666666.65901.peg.581 CDS gi|507574561|emb|CAVS020000032.1| 56843 55038 -2 - 1806 hypothetical protein - none -
fig|6666666.65901.peg.582 CDS gi|507574561|emb|CAVS020000032.1| 57828 58430 3 + 603 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.583 CDS gi|507574561|emb|CAVS020000032.1| 58436 62068 2 + 3633 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.65901.peg.584 CDS gi|507574561|emb|CAVS020000032.1| 62687 62184 -2 - 504 PROBABLE INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65901.peg.585 CDS gi|507574561|emb|CAVS020000032.1| 62855 64000 2 + 1146 Nucleoside-diphosphate-sugar epimerase - none -
fig|6666666.65901.peg.586 CDS gi|507574561|emb|CAVS020000032.1| 65306 63981 -2 - 1326 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65901.peg.587 CDS gi|507574561|emb|CAVS020000032.1| 65900 65547 -2 - 354 putative membrane protein. - none -
fig|6666666.65901.peg.588 CDS gi|507574561|emb|CAVS020000032.1| 66790 65918 -1 - 873 Putative secreted hydrolase - none -
fig|6666666.65901.peg.589 CDS gi|507574561|emb|CAVS020000032.1| 68174 66801 -2 - 1374 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase;
EC699-706
fig|6666666.65901.peg.590 CDS gi|507574561|emb|CAVS020000032.1| 68204 68668 2 + 465 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.591 CDS gi|507574561|emb|CAVS020000032.1| 69587 68661 -2 - 927 Suppressor of fused - none -
fig|6666666.65901.peg.592 CDS gi|507574561|emb|CAVS020000032.1| 69719 70525 2 + 807 FIG00543890: hypothetical protein - none -
fig|6666666.65901.peg.593 CDS gi|507574561|emb|CAVS020000032.1| 71132 70605 -2 - 528 hypothetical protein - none -
fig|6666666.65901.peg.594 CDS gi|507574561|emb|CAVS020000032.1| 71694 71173 -3 - 522 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65901.peg.595 CDS gi|507574561|emb|CAVS020000032.1| 72259 71801 -1 - 459 FIG00544319: hypothetical protein - none -
fig|6666666.65901.peg.596 CDS gi|507574561|emb|CAVS020000032.1| 72358 73230 1 + 873 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65901.peg.597 CDS gi|507574561|emb|CAVS020000032.1| 73231 73530 1 + 300 hypothetical protein - none -
fig|6666666.65901.peg.598 CDS gi|507574561|emb|CAVS020000032.1| 73549 74328 1 + 780 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65901.peg.599 CDS gi|507574561|emb|CAVS020000032.1| 75261 74329 -3 - 933 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65901.peg.600 CDS gi|507574561|emb|CAVS020000032.1| 75366 76658 3 + 1293 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.65901.peg.601 CDS gi|507574561|emb|CAVS020000032.1| 77083 76655 -1 - 429 FIG00546727: hypothetical protein - none -
fig|6666666.65901.peg.602 CDS gi|507574561|emb|CAVS020000032.1| 77082 77660 3 + 579 putative LysR-family transcriptional regulator - none -
fig|6666666.65901.peg.603 CDS gi|507574561|emb|CAVS020000032.1| 77714 78310 2 + 597 hypothetical protein - none -
fig|6666666.65901.peg.604 CDS gi|507574561|emb|CAVS020000032.1| 78497 78955 2 + 459 sortase or related acyltransferase - none -
fig|6666666.65901.peg.605 CDS gi|507574561|emb|CAVS020000032.1| 80031 78952 -3 - 1080 permease of the major facilitator superfamily - none -
fig|6666666.65901.peg.606 CDS gi|507574564|emb|CAVS020000031.1| 5 568 2 + 564 Co/Zn/Cd efflux system component - none -
fig|6666666.65901.peg.607 CDS gi|507574564|emb|CAVS020000031.1| 1199 576 -2 - 624 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65901.peg.608 CDS gi|507574564|emb|CAVS020000031.1| 1252 1659 1 + 408 FIG00544115: hypothetical protein - none -
fig|6666666.65901.peg.609 CDS gi|507574564|emb|CAVS020000031.1| 1652 2281 2 + 630 hypothetical membrane protein - none -
fig|6666666.65901.peg.610 CDS gi|507574564|emb|CAVS020000031.1| 3814 2282 -1 - 1533 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65901.peg.611 CDS gi|507574564|emb|CAVS020000031.1| 3969 4826 3 + 858 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65901.peg.612 CDS gi|507574564|emb|CAVS020000031.1| 4932 6737 3 + 1806 High-affinity choline uptake protein BetT Niacin-Choline transport and metabolism
fig|6666666.65901.peg.613 CDS gi|507574564|emb|CAVS020000031.1| 6822 8666 3 + 1845 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65901.peg.614 CDS gi|507574567|emb|CAVS020000030.1| 114 905 3 + 792 Phytoene dehydrogenase and related proteins - none -
fig|6666666.65901.peg.615 CDS gi|507574567|emb|CAVS020000030.1| 1173 889 -3 - 285 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65901.peg.616 CDS gi|507574567|emb|CAVS020000030.1| 1654 1175 -1 - 480 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65901.peg.617 CDS gi|507574567|emb|CAVS020000030.1| 2448 1651 -3 - 798 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.65901.peg.618 CDS gi|507574567|emb|CAVS020000030.1| 3218 2445 -2 - 774 inositol monophosphatase family protein - none -
fig|6666666.65901.peg.619 CDS gi|507574567|emb|CAVS020000030.1| 3249 7880 3 + 4632 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65901.peg.620 CDS gi|507574567|emb|CAVS020000030.1| 9451 7904 -1 - 1548 hypothetical protein - none -
fig|6666666.65901.peg.621 CDS gi|507574567|emb|CAVS020000030.1| 9779 9543 -2 - 237 hypothetical protein - none -
fig|6666666.65901.peg.622 CDS gi|507574567|emb|CAVS020000030.1| 11215 10562 -1 - 654 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65901.peg.623 CDS gi|507574567|emb|CAVS020000030.1| 13063 11330 -1 - 1734 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65901.peg.624 CDS gi|507574567|emb|CAVS020000030.1| 13078 13416 1 + 339 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.65901.peg.625 CDS gi|507574567|emb|CAVS020000030.1| 13717 13424 -1 - 294 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65901.peg.626 CDS gi|507574567|emb|CAVS020000030.1| 13785 16097 3 + 2313 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65901.peg.627 CDS gi|507574567|emb|CAVS020000030.1| 16800 16102 -3 - 699 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65901.peg.628 CDS gi|507574567|emb|CAVS020000030.1| 17858 17118 -2 - 741 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65901.peg.629 CDS gi|507574567|emb|CAVS020000030.1| 18039 19400 3 + 1362 hypothetical protein - none -
fig|6666666.65901.peg.630 CDS gi|507574567|emb|CAVS020000030.1| 19432 19995 1 + 564 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.65901.peg.631 CDS gi|507574567|emb|CAVS020000030.1| 19988 21526 2 + 1539 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65901.peg.632 CDS gi|507574567|emb|CAVS020000030.1| 21574 22410 1 + 837 hypothetical protein - none -
fig|6666666.65901.peg.633 CDS gi|507574567|emb|CAVS020000030.1| 22507 22992 1 + 486 Putative membrane protein - none -
fig|6666666.65901.peg.634 CDS gi|507574567|emb|CAVS020000030.1| 23004 23804 3 + 801 hypothetical protein - none -
fig|6666666.65901.peg.635 CDS gi|507574567|emb|CAVS020000030.1| 24484 23801 -1 - 684 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.636 CDS gi|507574567|emb|CAVS020000030.1| 24881 24633 -2 - 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.65901.peg.637 CDS gi|507574567|emb|CAVS020000030.1| 25201 24896 -1 - 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.65901.peg.638 CDS gi|507574567|emb|CAVS020000030.1| 25369 25205 -1 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65901.peg.639 CDS gi|507574567|emb|CAVS020000030.1| 25509 25369 -3 - 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65901.peg.640 CDS gi|507574567|emb|CAVS020000030.1| 26528 25926 -2 - 603 DNA-binding response regulator, LuxR family - none -
fig|6666666.65901.peg.641 CDS gi|507574567|emb|CAVS020000030.1| 27571 26525 -1 - 1047 putative two-component system sensor kinase - none -
fig|6666666.65901.peg.642 CDS gi|507574567|emb|CAVS020000030.1| 27908 28450 2 + 543 hypothetical protein - none -
fig|6666666.65901.peg.643 CDS gi|507574567|emb|CAVS020000030.1| 28597 28866 1 + 270 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.65901.peg.644 CDS gi|507574567|emb|CAVS020000030.1| 28888 29061 1 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65901.peg.645 CDS gi|507574567|emb|CAVS020000030.1| 29170 29868 1 + 699 two-component system, response regulator - none -
fig|6666666.65901.peg.646 CDS gi|507574567|emb|CAVS020000030.1| 29865 31346 3 + 1482 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.65901.peg.647 CDS gi|507574567|emb|CAVS020000030.1| 31448 32713 2 + 1266 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.65901.peg.648 CDS gi|507574567|emb|CAVS020000030.1| 32765 33325 2 + 561 molybdopterin biosynthesis enzyme - none -
fig|6666666.65901.peg.649 CDS gi|507574567|emb|CAVS020000030.1| 33373 33546 1 + 174 hypothetical protein - none -
fig|6666666.65901.peg.650 CDS gi|507574567|emb|CAVS020000030.1| 33997 33575 -1 - 423 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65901.peg.651 CDS gi|507574567|emb|CAVS020000030.1| 34625 33981 -2 - 645 Heat shock protein 22.5 (Hsp22.5) - none -
fig|6666666.65901.peg.652 CDS gi|507574567|emb|CAVS020000030.1| 35238 34660 -3 - 579 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65901.peg.653 CDS gi|507574567|emb|CAVS020000030.1| 35314 36288 1 + 975 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65901.peg.654 CDS gi|507574567|emb|CAVS020000030.1| 36307 37653 1 + 1347 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.65901.peg.655 CDS gi|507574567|emb|CAVS020000030.1| 37664 38311 2 + 648 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.65901.peg.656 CDS gi|507574567|emb|CAVS020000030.1| 38427 39635 3 + 1209 FIG037137: Putative conserved transmembrane protein - none -
fig|6666666.65901.peg.657 CDS gi|507574570|emb|CAVS020000029.1| 1040 876 -2 - 165 hypothetical protein - none -
fig|6666666.65901.peg.658 CDS gi|507574570|emb|CAVS020000029.1| 1786 1142 -1 - 645 hypothetical protein - none -
fig|6666666.65901.peg.659 CDS gi|507574570|emb|CAVS020000029.1| 3447 1807 -3 - 1641 DNA repair helicase - none -
fig|6666666.65901.peg.660 CDS gi|507574570|emb|CAVS020000029.1| 3483 3710 3 + 228 ParD protein (antitoxin to ParE) Toxin-antitoxin replicon stabilization systems
fig|6666666.65901.peg.661 CDS gi|507574570|emb|CAVS020000029.1| 5134 3953 -1 - 1182 possible ABC transporter, permease component - none -
fig|6666666.65901.peg.662 CDS gi|507574570|emb|CAVS020000029.1| 6012 5134 -3 - 879 ABC transporter, ATP-binding protein - none -
fig|6666666.65901.peg.663 CDS gi|507574570|emb|CAVS020000029.1| 6506 6009 -2 - 498 Putative membrane protein - none -
fig|6666666.65901.peg.664 CDS gi|507574570|emb|CAVS020000029.1| 6760 6503 -1 - 258 transcriptional regulator, HTH_3 family - none -
fig|6666666.65901.peg.665 CDS gi|507574570|emb|CAVS020000029.1| 6846 9662 3 + 2817 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65901.peg.666 CDS gi|507574570|emb|CAVS020000029.1| 11716 9659 -1 - 2058 hypothetical protein - none -
fig|6666666.65901.peg.667 CDS gi|507574570|emb|CAVS020000029.1| 11770 11964 1 + 195 FIG00543815: hypothetical protein - none -
fig|6666666.65901.peg.668 CDS gi|507574570|emb|CAVS020000029.1| 12933 12211 -3 - 723 FIG00996461: hypothetical protein - none -
fig|6666666.65901.peg.669 CDS gi|507574570|emb|CAVS020000029.1| 13187 13570 2 + 384 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65901.peg.670 CDS gi|507574570|emb|CAVS020000029.1| 14089 13586 -1 - 504 FIG00545981: hypothetical protein - none -
fig|6666666.65901.peg.671 CDS gi|507574570|emb|CAVS020000029.1| 14895 14101 -3 - 795 glutamine cyclotransferase - none -
fig|6666666.65901.peg.672 CDS gi|507574570|emb|CAVS020000029.1| 14935 15615 1 + 681 FIG00546806: hypothetical protein - none -
fig|6666666.65901.peg.673 CDS gi|507574570|emb|CAVS020000029.1| 15674 17143 2 + 1470 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65901.peg.674 CDS gi|507574570|emb|CAVS020000029.1| 17144 17944 2 + 801 putative rRNA methylase - none -
fig|6666666.65901.peg.675 CDS gi|507574570|emb|CAVS020000029.1| 18786 17941 -3 - 846 FIG00544583: hypothetical protein - none -
fig|6666666.65901.peg.676 CDS gi|507574570|emb|CAVS020000029.1| 19854 18805 -3 - 1050 FIG00545091: hypothetical protein - none -
fig|6666666.65901.peg.677 CDS gi|507574570|emb|CAVS020000029.1| 20064 21359 3 + 1296 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65901.peg.678 CDS gi|507574570|emb|CAVS020000029.1| 21508 21867 1 + 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65901.peg.679 CDS gi|507574570|emb|CAVS020000029.1| 21877 22704 1 + 828 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65901.peg.680 CDS gi|507574570|emb|CAVS020000029.1| 22898 23236 2 + 339 FIG00544151: hypothetical protein - none -
fig|6666666.65901.peg.681 CDS gi|507574570|emb|CAVS020000029.1| 23240 24889 2 + 1650 putative transport protein - none -
fig|6666666.65901.peg.682 CDS gi|507574570|emb|CAVS020000029.1| 25787 24948 -2 - 840 Putative secreted protein - none -
fig|6666666.65901.peg.683 CDS gi|507574570|emb|CAVS020000029.1| 26493 25795 -3 - 699 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.65901.peg.684 CDS gi|507574570|emb|CAVS020000029.1| 27039 26758 -3 - 282 Mobile element protein - none -
fig|6666666.65901.peg.685 CDS gi|507574570|emb|CAVS020000029.1| 28277 27225 -2 - 1053 hypothetical protein - none -
fig|6666666.65901.peg.686 CDS gi|507574573|emb|CAVS020000028.1| 1218 2444 3 + 1227 hydrolase of the alpha/beta superfamily - none -
fig|6666666.65901.peg.687 CDS gi|507574573|emb|CAVS020000028.1| 2444 2842 2 + 399 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.65901.peg.688 CDS gi|507574573|emb|CAVS020000028.1| 3952 3071 -1 - 882 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) - none -
fig|6666666.65901.peg.689 CDS gi|507574573|emb|CAVS020000028.1| 4553 4008 -2 - 546 carbonic anhydrase, family 3 - none -
fig|6666666.65901.peg.690 CDS gi|507574573|emb|CAVS020000028.1| 5522 4587 -2 - 936 hypothetical protein - none -
fig|6666666.65901.peg.691 CDS gi|507574573|emb|CAVS020000028.1| 6543 5602 -3 - 942 hypothetical protein - none -
fig|6666666.65901.peg.692 CDS gi|507574573|emb|CAVS020000028.1| 6564 7346 3 + 783 FIG00545160: hypothetical protein - none -
fig|6666666.65901.peg.693 CDS gi|507574573|emb|CAVS020000028.1| 8056 7343 -1 - 714 hypothetical protein - none -
fig|6666666.65901.peg.694 CDS gi|507574573|emb|CAVS020000028.1| 9704 8061 -2 - 1644 GTP-binding protein EngA - none -
fig|6666666.65901.peg.695 CDS gi|507574573|emb|CAVS020000028.1| 10402 9701 -1 - 702 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65901.peg.696 CDS gi|507574573|emb|CAVS020000028.1| 11332 10403 -1 - 930 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65901.peg.697 CDS gi|507574573|emb|CAVS020000028.1| 11901 11344 -3 - 558 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65901.peg.698 CDS gi|507574573|emb|CAVS020000028.1| 12778 11957 -1 - 822 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65901.peg.699 CDS gi|507574573|emb|CAVS020000028.1| 13647 12778 -3 - 870 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65901.peg.700 CDS gi|507574573|emb|CAVS020000028.1| 14248 13709 -1 - 540 hypothetical protein - none -
fig|6666666.65901.peg.701 CDS gi|507574573|emb|CAVS020000028.1| 14240 14839 2 + 600 hypothetical protein - none -
fig|6666666.65901.peg.702 CDS gi|507574573|emb|CAVS020000028.1| 15823 14903 -1 - 921 Tyrosine recombinase XerD - none -
fig|6666666.65901.peg.703 CDS gi|507574573|emb|CAVS020000028.1| 16474 15827 -1 - 648 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65901.peg.704 CDS gi|507574573|emb|CAVS020000028.1| 17342 16494 -2 - 849 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.65901.peg.705 CDS gi|507574573|emb|CAVS020000028.1| 18598 17357 -1 - 1242 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.65901.peg.706 CDS gi|507574573|emb|CAVS020000028.1| 20369 18642 -2 - 1728 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.65901.peg.707 CDS gi|507574573|emb|CAVS020000028.1| 21311 20391 -2 - 921 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.65901.peg.708 CDS gi|507574573|emb|CAVS020000028.1| 22136 21312 -2 - 825 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.65901.peg.709 CDS gi|507574573|emb|CAVS020000028.1| 22343 22158 -2 - 186 hypothetical protein - none -
fig|6666666.65901.peg.710 CDS gi|507574573|emb|CAVS020000028.1| 23317 22334 -1 - 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65901.peg.711 CDS gi|507574573|emb|CAVS020000028.1| 23996 23322 -2 - 675 TPR-repeat-containing protein - none -
fig|6666666.65901.peg.712 CDS gi|507574573|emb|CAVS020000028.1| 24039 24443 3 + 405 hypothetical protein - none -
fig|6666666.65901.peg.713 CDS gi|507574576|emb|CAVS020000027.1| 100 555 1 + 456 probable Xaa-Pro dipeptidase( EC:3.4.13.9 ) - none -
fig|6666666.65901.peg.714 CDS gi|507574576|emb|CAVS020000027.1| 548 1282 2 + 735 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65901.peg.715 CDS gi|507574576|emb|CAVS020000027.1| 1303 1851 1 + 549 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65901.peg.716 CDS gi|507574576|emb|CAVS020000027.1| 1942 3429 1 + 1488 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65901.peg.717 CDS gi|507574576|emb|CAVS020000027.1| 3434 4429 2 + 996 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65901.peg.718 CDS gi|507574576|emb|CAVS020000027.1| 4889 4512 -2 - 378 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65901.peg.719 CDS gi|507574576|emb|CAVS020000027.1| 5009 5356 2 + 348 hypothetical protein - none -
fig|6666666.65901.peg.720 CDS gi|507574576|emb|CAVS020000027.1| 5455 5318 -1 - 138 hypothetical protein - none -
fig|6666666.65901.peg.721 CDS gi|507574576|emb|CAVS020000027.1| 5720 6073 2 + 354 Putative secreted protein - none -
fig|6666666.65901.peg.722 CDS gi|507574576|emb|CAVS020000027.1| 7545 6226 -3 - 1320 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65901.peg.723 CDS gi|507574576|emb|CAVS020000027.1| 7679 9016 2 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65901.peg.724 CDS gi|507574576|emb|CAVS020000027.1| 9278 11395 2 + 2118 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.65901.peg.725 CDS gi|507574576|emb|CAVS020000027.1| 11441 11692 2 + 252 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.65901.peg.726 CDS gi|507574576|emb|CAVS020000027.1| 11696 12571 2 + 876 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.65901.peg.727 CDS gi|507574576|emb|CAVS020000027.1| 12880 13848 1 + 969 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65901.peg.728 CDS gi|507574576|emb|CAVS020000027.1| 14298 13849 -3 - 450 FIG00544657: hypothetical protein - none -
fig|6666666.65901.peg.729 CDS gi|507574576|emb|CAVS020000027.1| 14351 15820 2 + 1470 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pentose phosphate pathway
fig|6666666.65901.peg.730 CDS gi|507574576|emb|CAVS020000027.1| 15864 17174 3 + 1311 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65901.peg.731 CDS gi|507574576|emb|CAVS020000027.1| 17192 18586 2 + 1395 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.65901.peg.732 CDS gi|507574576|emb|CAVS020000027.1| 18583 19635 1 + 1053 FIG00546228: hypothetical protein - none -
fig|6666666.65901.peg.733 CDS gi|507574576|emb|CAVS020000027.1| 19635 20492 3 + 858 FIG00545058: hypothetical protein - none -
fig|6666666.65901.peg.734 CDS gi|507574576|emb|CAVS020000027.1| 20541 21992 3 + 1452 Putative secreted protein - none -
fig|6666666.65901.peg.735 CDS gi|507574576|emb|CAVS020000027.1| 22755 22189 -3 - 567 FIG00544641: hypothetical protein - none -
fig|6666666.65901.peg.736 CDS gi|507574576|emb|CAVS020000027.1| 23434 22874 -1 - 561 FIG00544095: hypothetical protein - none -
fig|6666666.65901.peg.737 CDS gi|507574576|emb|CAVS020000027.1| 24195 23434 -3 - 762 FIG00545122: hypothetical protein - none -
fig|6666666.65901.peg.738 CDS gi|507574576|emb|CAVS020000027.1| 24641 24216 -2 - 426 FIG00672531: hypothetical protein - none -
fig|6666666.65901.peg.739 CDS gi|507574576|emb|CAVS020000027.1| 25919 24729 -2 - 1191 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65901.peg.740 CDS gi|507574579|emb|CAVS020000026.1| 1017 91 -3 - 927 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65901.peg.741 CDS gi|507574579|emb|CAVS020000026.1| 1190 3022 2 + 1833 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65901.peg.742 CDS gi|507574579|emb|CAVS020000026.1| 3030 4292 3 + 1263 hypothetical protein - none -
fig|6666666.65901.peg.743 CDS gi|507574579|emb|CAVS020000026.1| 4305 5666 3 + 1362 ATPase, AAA family - none -
fig|6666666.65901.peg.744 CDS gi|507574579|emb|CAVS020000026.1| 5740 8406 1 + 2667 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65901.peg.745 CDS gi|507574579|emb|CAVS020000026.1| 8547 9035 3 + 489 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65901.peg.746 CDS gi|507574579|emb|CAVS020000026.1| 9038 10186 2 + 1149 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65901.peg.747 CDS gi|507574579|emb|CAVS020000026.1| 10190 11011 2 + 822 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65901.peg.748 CDS gi|507574579|emb|CAVS020000026.1| 11485 12708 1 + 1224 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65901.peg.749 CDS gi|507574579|emb|CAVS020000026.1| 12705 13373 3 + 669 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65901.peg.750 CDS gi|507574579|emb|CAVS020000026.1| 13405 14457 1 + 1053 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65901.peg.751 CDS gi|507574579|emb|CAVS020000026.1| 14460 14894 3 + 435 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65901.peg.752 CDS gi|507574579|emb|CAVS020000026.1| 14894 15985 2 + 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65901.peg.753 CDS gi|507574579|emb|CAVS020000026.1| 16037 16600 2 + 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65901.peg.754 CDS gi|507574579|emb|CAVS020000026.1| 16600 17232 1 + 633 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65901.peg.755 CDS gi|507574579|emb|CAVS020000026.1| 17346 18188 3 + 843 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.65901.peg.756 CDS gi|507574579|emb|CAVS020000026.1| 18661 18185 -1 - 477 FIG00546283: hypothetical protein - none -
fig|6666666.65901.peg.757 CDS gi|507574579|emb|CAVS020000026.1| 19143 18661 -3 - 483 FIG00544983: hypothetical protein - none -
fig|6666666.65901.peg.758 CDS gi|507574579|emb|CAVS020000026.1| 20471 19140 -2 - 1332 Cell division inhibitor Persister Cells
fig|6666666.65901.peg.759 CDS gi|507574579|emb|CAVS020000026.1| 20602 21177 1 + 576 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.760 CDS gi|507574579|emb|CAVS020000026.1| 21174 22124 3 + 951 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.761 CDS gi|507574579|emb|CAVS020000026.1| 22121 23404 2 + 1284 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.762 CDS gi|507574579|emb|CAVS020000026.1| 23408 23887 2 + 480 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.763 CDS gi|507574579|emb|CAVS020000026.1| 23911 27267 1 + 3357 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.764 CDS gi|507574579|emb|CAVS020000026.1| 27267 28094 3 + 828 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.65901.peg.765 CDS gi|507574579|emb|CAVS020000026.1| 28306 28641 1 + 336 integration host factor - none -
fig|6666666.65901.peg.766 CDS gi|507574579|emb|CAVS020000026.1| 28716 29231 3 + 516 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65901.peg.767 CDS gi|507574579|emb|CAVS020000026.1| 29246 29563 2 + 318 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65901.peg.768 CDS gi|507574579|emb|CAVS020000026.1| 29652 30908 3 + 1257 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65901.peg.769 CDS gi|507574579|emb|CAVS020000026.1| 31050 32267 3 + 1218 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.770 CDS gi|507574579|emb|CAVS020000026.1| 33130 32264 -1 - 867 hypothetical protein - none -
fig|6666666.65901.peg.771 CDS gi|507574579|emb|CAVS020000026.1| 33493 33134 -1 - 360 hypothetical protein - none -
fig|6666666.65901.peg.772 CDS gi|507574579|emb|CAVS020000026.1| 34494 33511 -3 - 984 Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) Polysaccharide deacetylases
fig|6666666.65901.peg.773 CDS gi|507574579|emb|CAVS020000026.1| 34630 36639 1 + 2010 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65901.peg.774 CDS gi|507574579|emb|CAVS020000026.1| 36680 37171 2 + 492 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65901.peg.775 CDS gi|507574579|emb|CAVS020000026.1| 37185 38114 3 + 930 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.65901.peg.776 CDS gi|507574579|emb|CAVS020000026.1| 38111 39589 2 + 1479 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.65901.peg.777 CDS gi|507574579|emb|CAVS020000026.1| 39600 40262 3 + 663 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65901.peg.778 CDS gi|507574579|emb|CAVS020000026.1| 40259 41257 2 + 999 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65901.peg.779 CDS gi|507574579|emb|CAVS020000026.1| 41238 41825 3 + 588 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65901.peg.780 CDS gi|507574579|emb|CAVS020000026.1| 41837 43090 2 + 1254 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65901.peg.781 CDS gi|507574579|emb|CAVS020000026.1| 43114 43599 1 + 486 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.65901.peg.782 CDS gi|507574579|emb|CAVS020000026.1| 43677 44210 3 + 534 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65901.peg.783 CDS gi|507574579|emb|CAVS020000026.1| 44214 46274 3 + 2061 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65901.peg.784 CDS gi|507574579|emb|CAVS020000026.1| 46383 47240 3 + 858 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.65901.peg.785 CDS gi|507574579|emb|CAVS020000026.1| 47275 48240 1 + 966 Hypothetical protein UPF0052 - none -
fig|6666666.65901.peg.786 CDS gi|507574579|emb|CAVS020000026.1| 48291 49259 3 + 969 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65901.peg.787 CDS gi|507574579|emb|CAVS020000026.1| 49498 50508 1 + 1011 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65901.peg.788 CDS gi|507574579|emb|CAVS020000026.1| 50600 51811 2 + 1212 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65901.peg.789 CDS gi|507574579|emb|CAVS020000026.1| 51826 52599 1 + 774 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65901.peg.790 CDS gi|507574579|emb|CAVS020000026.1| 52681 52917 1 + 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65901.peg.791 CDS gi|507574579|emb|CAVS020000026.1| 53624 52941 -2 - 684 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65901.peg.792 CDS gi|507574579|emb|CAVS020000026.1| 54543 53614 -3 - 930 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65901.peg.793 CDS gi|507574579|emb|CAVS020000026.1| 56099 54561 -2 - 1539 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65901.peg.794 CDS gi|507574579|emb|CAVS020000026.1| 57192 56101 -3 - 1092 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.65901.peg.795 CDS gi|507574579|emb|CAVS020000026.1| 59436 57202 -3 - 2235 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65901.peg.796 CDS gi|507574579|emb|CAVS020000026.1| 59533 60447 1 + 915 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65901.peg.797 CDS gi|507574579|emb|CAVS020000026.1| 61400 60444 -2 - 957 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65901.peg.798 CDS gi|507574579|emb|CAVS020000026.1| 62352 61402 -3 - 951 Cytochrome oxidase assembly protein - none -
fig|6666666.65901.peg.799 CDS gi|507574579|emb|CAVS020000026.1| 63165 62401 -3 - 765 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65901.peg.800 CDS gi|507574579|emb|CAVS020000026.1| 64091 63165 -2 - 927 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65901.peg.801 CDS gi|507574579|emb|CAVS020000026.1| 65637 64084 -3 - 1554 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65901.peg.802 CDS gi|507574579|emb|CAVS020000026.1| 65919 66686 3 + 768 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65901.peg.803 CDS gi|507574579|emb|CAVS020000026.1| 66679 68124 1 + 1446 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65901.peg.804 CDS gi|507574579|emb|CAVS020000026.1| 68125 69288 1 + 1164 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65901.peg.805 CDS gi|507574579|emb|CAVS020000026.1| 69301 70056 1 + 756 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65901.peg.806 CDS gi|507574579|emb|CAVS020000026.1| 70056 71288 3 + 1233 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.65901.peg.807 CDS gi|507574579|emb|CAVS020000026.1| 71285 71734 2 + 450 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65901.peg.808 CDS gi|507574579|emb|CAVS020000026.1| 71737 72111 1 + 375 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65901.peg.809 CDS gi|507574579|emb|CAVS020000026.1| 72322 73950 1 + 1629 ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.810 CDS gi|507574579|emb|CAVS020000026.1| 75577 73976 -1 - 1602 hypothetical protein - none -
fig|6666666.65901.peg.811 CDS gi|507574579|emb|CAVS020000026.1| 78314 78556 2 + 243 hypothetical protein - none -
fig|6666666.65901.peg.812 CDS gi|507574579|emb|CAVS020000026.1| 81245 79881 -2 - 1365 FIG00848225: hypothetical protein - none -
fig|6666666.65901.peg.813 CDS gi|507574579|emb|CAVS020000026.1| 81524 81255 -2 - 270 ACT domain protein - none -
fig|6666666.65901.peg.814 CDS gi|507574579|emb|CAVS020000026.1| 81566 82234 2 + 669 FIG00545571: hypothetical protein - none -
fig|6666666.65901.peg.815 CDS gi|507574579|emb|CAVS020000026.1| 82953 82231 -3 - 723 GMP synthase - none -
fig|6666666.65901.peg.816 CDS gi|507574579|emb|CAVS020000026.1| 83542 82991 -1 - 552 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.817 CDS gi|507574579|emb|CAVS020000026.1| 86413 83636 -1 - 2778 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Methylcitrate cycle;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65901.peg.818 CDS gi|507574579|emb|CAVS020000026.1| 86623 87099 1 + 477 hypothetical protein - none -
fig|6666666.65901.peg.819 CDS gi|507574579|emb|CAVS020000026.1| 87120 87242 3 + 123 hypothetical protein - none -
fig|6666666.65901.peg.820 CDS gi|507574579|emb|CAVS020000026.1| 87648 89378 3 + 1731 cell wall-associated hydrolase - none -
fig|6666666.65901.peg.821 CDS gi|507574579|emb|CAVS020000026.1| 89397 90434 3 + 1038 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.822 CDS gi|507574579|emb|CAVS020000026.1| 91183 90431 -1 - 753 FIG00546138: hypothetical protein - none -
fig|6666666.65901.peg.823 CDS gi|507574579|emb|CAVS020000026.1| 91296 92066 3 + 771 FIG00544636: hypothetical protein - none -
fig|6666666.65901.peg.824 CDS gi|507574579|emb|CAVS020000026.1| 92088 92516 3 + 429 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.65901.peg.825 CDS gi|507574579|emb|CAVS020000026.1| 92517 93791 3 + 1275 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65901.peg.826 CDS gi|507574579|emb|CAVS020000026.1| 94332 93763 -3 - 570 FIG00545282: hypothetical protein - none -
fig|6666666.65901.peg.827 CDS gi|507574579|emb|CAVS020000026.1| 95030 94353 -2 - 678 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.65901.peg.828 CDS gi|507574579|emb|CAVS020000026.1| 96985 95243 -1 - 1743 hypothetical protein - none -
fig|6666666.65901.peg.829 CDS gi|507574579|emb|CAVS020000026.1| 97144 96989 -1 - 156 hypothetical protein - none -
fig|6666666.65901.peg.830 CDS gi|507574579|emb|CAVS020000026.1| 97759 97950 1 + 192 hypothetical protein - none -
fig|6666666.65901.peg.831 CDS gi|507574579|emb|CAVS020000026.1| 98316 99767 3 + 1452 FIG00544414: hypothetical protein - none -
fig|6666666.65901.peg.832 CDS gi|507574579|emb|CAVS020000026.1| 99768 101573 3 + 1806 ABC transporter TetB - none -
fig|6666666.65901.peg.833 CDS gi|507574579|emb|CAVS020000026.1| 101595 102128 3 + 534 Phospholipid-binding protein - none -
fig|6666666.65901.peg.834 CDS gi|507574579|emb|CAVS020000026.1| 102139 102495 1 + 357 FIG00543853: hypothetical protein - none -
fig|6666666.65901.peg.835 CDS gi|507574579|emb|CAVS020000026.1| 103571 102492 -2 - 1080 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.836 CDS gi|507574579|emb|CAVS020000026.1| 104636 103584 -2 - 1053 FIG00545923: hypothetical protein - none -
fig|6666666.65901.peg.837 CDS gi|507574579|emb|CAVS020000026.1| 104695 105552 1 + 858 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65901.peg.838 CDS gi|507574579|emb|CAVS020000026.1| 105569 106783 2 + 1215 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65901.peg.839 CDS gi|507574579|emb|CAVS020000026.1| 106799 107206 2 + 408 FIG00543988: hypothetical protein - none -
fig|6666666.65901.peg.840 CDS gi|507574579|emb|CAVS020000026.1| 107229 107867 3 + 639 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.65901.peg.841 CDS gi|507574579|emb|CAVS020000026.1| 107913 109361 3 + 1449 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65901.peg.842 CDS gi|507574579|emb|CAVS020000026.1| 109460 110770 2 + 1311 C4-dicarboxylate transporter DcuA - none -
fig|6666666.65901.peg.843 CDS gi|507574579|emb|CAVS020000026.1| 110860 112443 1 + 1584 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65901.peg.844 CDS gi|507574579|emb|CAVS020000026.1| 113330 112440 -2 - 891 RecB family exonuclease - none -
fig|6666666.65901.peg.845 CDS gi|507574579|emb|CAVS020000026.1| 113342 114553 2 + 1212 aspartyl aminopeptidase - none -
fig|6666666.65901.peg.846 CDS gi|507574579|emb|CAVS020000026.1| 114602 115402 2 + 801 RNA methyltransferase - none -
fig|6666666.65901.peg.847 CDS gi|507574579|emb|CAVS020000026.1| 115432 116952 1 + 1521 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65901.peg.848 CDS gi|507574579|emb|CAVS020000026.1| 117735 116971 -3 - 765 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65901.peg.849 CDS gi|507574579|emb|CAVS020000026.1| 119383 118013 -1 - 1371 Transcriptional regulator, GntR family / Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65901.peg.850 CDS gi|507574579|emb|CAVS020000026.1| 119454 120329 3 + 876 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65901.peg.851 CDS gi|507574579|emb|CAVS020000026.1| 121887 120433 -3 - 1455 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.65901.peg.852 CDS gi|507574579|emb|CAVS020000026.1| 121984 123483 1 + 1500 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65901.peg.853 CDS gi|507574579|emb|CAVS020000026.1| 123494 123682 2 + 189 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65901.peg.854 CDS gi|507574579|emb|CAVS020000026.1| 123711 125078 3 + 1368 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65901.peg.855 CDS gi|507574579|emb|CAVS020000026.1| 125085 126038 3 + 954 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65901.peg.856 CDS gi|507574579|emb|CAVS020000026.1| 126038 126964 2 + 927 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65901.peg.857 CDS gi|507574579|emb|CAVS020000026.1| 127000 127263 1 + 264 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65901.peg.858 CDS gi|507574579|emb|CAVS020000026.1| 127273 128283 1 + 1011 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65901.peg.859 CDS gi|507574579|emb|CAVS020000026.1| 128289 131051 3 + 2763 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65901.peg.860 CDS gi|507574579|emb|CAVS020000026.1| 131623 131048 -1 - 576 FIG00545318: hypothetical protein - none -
fig|6666666.65901.peg.861 CDS gi|507574582|emb|CAVS020000025.1| 17 376 2 + 360 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin synthesis cluster
fig|6666666.65901.peg.862 CDS gi|507574582|emb|CAVS020000025.1| 400 762 1 + 363 putative transcription regulator - none -
fig|6666666.65901.peg.863 CDS gi|507574582|emb|CAVS020000025.1| 834 1709 3 + 876 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65901.peg.864 CDS gi|507574582|emb|CAVS020000025.1| 2529 1924 -3 - 606 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65901.peg.865 CDS gi|507574582|emb|CAVS020000025.1| 3215 2526 -2 - 690 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65901.peg.866 CDS gi|507574582|emb|CAVS020000025.1| 3787 3221 -1 - 567 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65901.peg.867 CDS gi|507574582|emb|CAVS020000025.1| 3858 4046 3 + 189 hypothetical protein - none -
fig|6666666.65901.peg.868 CDS gi|507574582|emb|CAVS020000025.1| 4280 4059 -2 - 222 hypothetical protein - none -
fig|6666666.65901.peg.869 CDS gi|507574582|emb|CAVS020000025.1| 4281 5408 3 + 1128 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65901.peg.870 CDS gi|507574582|emb|CAVS020000025.1| 5409 5990 3 + 582 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65901.peg.871 CDS gi|507574582|emb|CAVS020000025.1| 6053 6754 2 + 702 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.872 CDS gi|507574582|emb|CAVS020000025.1| 6751 7899 1 + 1149 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65901.peg.873 CDS gi|507574582|emb|CAVS020000025.1| 7924 9450 1 + 1527 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA processing
fig|6666666.65901.peg.874 CDS gi|507574582|emb|CAVS020000025.1| 9459 10082 3 + 624 Putative membrane protein - none -
fig|6666666.65901.peg.875 CDS gi|507574582|emb|CAVS020000025.1| 11230 10151 -1 - 1080 No significant database matches - none -
fig|6666666.65901.peg.876 CDS gi|507574582|emb|CAVS020000025.1| 12605 11244 -2 - 1362 ATPase involved in DNA repair - none -
fig|6666666.65901.peg.877 CDS gi|507574582|emb|CAVS020000025.1| 12733 13299 1 + 567 hypothetical protein - none -
fig|6666666.65901.peg.878 CDS gi|507574582|emb|CAVS020000025.1| 13296 14195 3 + 900 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.65901.peg.879 CDS gi|507574582|emb|CAVS020000025.1| 14192 15001 2 + 810 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.880 CDS gi|507574582|emb|CAVS020000025.1| 15130 16041 1 + 912 hypothetical protein - none -
fig|6666666.65901.peg.881 CDS gi|507574582|emb|CAVS020000025.1| 16596 16081 -3 - 516 hypothetical protein - none -
fig|6666666.65901.peg.882 CDS gi|507574582|emb|CAVS020000025.1| 17356 16616 -1 - 741 FIG00546075: hypothetical protein - none -
fig|6666666.65901.peg.883 CDS gi|507574582|emb|CAVS020000025.1| 17445 18974 3 + 1530 GTP-binding protein HflX Hfl operon
fig|6666666.65901.peg.884 CDS gi|507574582|emb|CAVS020000025.1| 19720 18971 -1 - 750 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.65901.peg.885 CDS gi|507574582|emb|CAVS020000025.1| 19843 21108 1 + 1266 xanthine/uracil permeases - none -
fig|6666666.65901.peg.886 CDS gi|507574582|emb|CAVS020000025.1| 21453 21184 -3 - 270 Phosphocarrier protein of PTS system - none -
fig|6666666.65901.peg.887 CDS gi|507574582|emb|CAVS020000025.1| 22327 21539 -1 - 789 Transcriptional repressor of the fructose operon, DeoR family - none -
fig|6666666.65901.peg.888 CDS gi|507574582|emb|CAVS020000025.1| 23058 22378 -3 - 681 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65901.peg.889 CDS gi|507574582|emb|CAVS020000025.1| 23527 23649 1 + 123 hypothetical protein - none -
fig|6666666.65901.peg.890 CDS gi|507574582|emb|CAVS020000025.1| 23850 24164 3 + 315 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.65901.peg.891 CDS gi|507574582|emb|CAVS020000025.1| 28100 24180 -2 - 3921 ATP-dependent helicase HrpA - none -
fig|6666666.65901.peg.892 CDS gi|507574582|emb|CAVS020000025.1| 29117 28161 -2 - 957 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65901.peg.893 CDS gi|507574582|emb|CAVS020000025.1| 29235 29831 3 + 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.65901.peg.894 CDS gi|507574582|emb|CAVS020000025.1| 29871 30395 3 + 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.65901.peg.895 CDS gi|507574582|emb|CAVS020000025.1| 33969 30538 -3 - 3432 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.65901.peg.896 CDS gi|507574582|emb|CAVS020000025.1| 35363 34116 -2 - 1248 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.65901.peg.897 CDS gi|507574582|emb|CAVS020000025.1| 38002 35462 -1 - 2541 putative helicase - none -
fig|6666666.65901.peg.898 CDS gi|507574582|emb|CAVS020000025.1| 39103 38036 -1 - 1068 FIG00544614: hypothetical protein - none -
fig|6666666.65901.peg.899 CDS gi|507574582|emb|CAVS020000025.1| 39120 40472 3 + 1353 hypothetical protein - none -
fig|6666666.65901.peg.900 CDS gi|507574582|emb|CAVS020000025.1| 41469 40480 -3 - 990 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.65901.peg.901 CDS gi|507574582|emb|CAVS020000025.1| 42184 41507 -1 - 678 Iron-dependent repressor IdeR/DtxR - none -
fig|6666666.65901.peg.902 CDS gi|507574582|emb|CAVS020000025.1| 43322 42321 -2 - 1002 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65901.peg.903 CDS gi|507574582|emb|CAVS020000025.1| 43868 43434 -2 - 435 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65901.peg.904 CDS gi|507574582|emb|CAVS020000025.1| 45444 43885 -3 - 1560 Putative transferase - none -
fig|6666666.65901.peg.905 CDS gi|507574582|emb|CAVS020000025.1| 45893 45471 -2 - 423 putative membrane protein - none -
fig|6666666.65901.peg.906 CDS gi|507574582|emb|CAVS020000025.1| 45942 46199 3 + 258 FIG00544358: hypothetical protein - none -
fig|6666666.65901.peg.907 CDS gi|507574582|emb|CAVS020000025.1| 46196 47959 2 + 1764 DNA or RNA helicases of superfamily II - none -
fig|6666666.65901.peg.908 CDS gi|507574582|emb|CAVS020000025.1| 48008 48622 2 + 615 hypothetical protein - none -
fig|6666666.65901.peg.909 CDS gi|507574582|emb|CAVS020000025.1| 50225 48708 -2 - 1518 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65901.peg.910 CDS gi|507574582|emb|CAVS020000025.1| 51152 50394 -2 - 759 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65901.peg.911 CDS gi|507574582|emb|CAVS020000025.1| 51319 51612 1 + 294 FIG00545109: hypothetical protein - none -
fig|6666666.65901.peg.912 CDS gi|507574582|emb|CAVS020000025.1| 52226 51693 -2 - 534 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65901.peg.913 CDS gi|507574582|emb|CAVS020000025.1| 52347 52847 3 + 501 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65901.peg.914 CDS gi|507574582|emb|CAVS020000025.1| 52933 53922 1 + 990 FIG00545882: hypothetical protein - none -
fig|6666666.65901.peg.915 CDS gi|507574582|emb|CAVS020000025.1| 53923 55200 1 + 1278 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.65901.peg.916 CDS gi|507574582|emb|CAVS020000025.1| 55266 57227 3 + 1962 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65901.peg.917 CDS gi|507574582|emb|CAVS020000025.1| 58429 57224 -1 - 1206 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.65901.peg.918 CDS gi|507574582|emb|CAVS020000025.1| 59083 58442 -1 - 642 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65901.peg.919 CDS gi|507574582|emb|CAVS020000025.1| 59209 59910 1 + 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.920 CDS gi|507574582|emb|CAVS020000025.1| 60365 59964 -2 - 402 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65901.peg.921 CDS gi|507574582|emb|CAVS020000025.1| 61546 60362 -1 - 1185 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65901.peg.922 CDS gi|507574582|emb|CAVS020000025.1| 62288 61626 -2 - 663 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.65901.peg.923 CDS gi|507574582|emb|CAVS020000025.1| 62403 63863 3 + 1461 hypothetical protein - none -
fig|6666666.65901.peg.924 CDS gi|507574582|emb|CAVS020000025.1| 63866 64840 2 + 975 Asparagine synthetase (EC 6.3.5.4) - none -
fig|6666666.65901.peg.925 CDS gi|507574582|emb|CAVS020000025.1| 66043 66615 1 + 573 Copper resistance protein CopC Copper Transport System;
Copper homeostasis
fig|6666666.65901.peg.926 CDS gi|507574582|emb|CAVS020000025.1| 66626 67237 2 + 612 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65901.peg.927 CDS gi|507574582|emb|CAVS020000025.1| 67251 68468 3 + 1218 Dyp-type peroxidase family protein - none -
fig|6666666.65901.peg.928 CDS gi|507574582|emb|CAVS020000025.1| 68578 70632 1 + 2055 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.65901.peg.929 CDS gi|507574582|emb|CAVS020000025.1| 70616 71236 2 + 621 FIG049476: HIT family protein - none -
fig|6666666.65901.peg.930 CDS gi|507574582|emb|CAVS020000025.1| 71229 71864 3 + 636 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.931 CDS gi|507574582|emb|CAVS020000025.1| 71865 72809 3 + 945 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.65901.peg.932 CDS gi|507574582|emb|CAVS020000025.1| 72875 73903 2 + 1029 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.65901.peg.933 CDS gi|507574582|emb|CAVS020000025.1| 73900 74355 1 + 456 FIG053954: Probable conserved membrane protein - none -
fig|6666666.65901.peg.934 CDS gi|507574582|emb|CAVS020000025.1| 74422 75174 1 + 753 FIG000859: hypothetical protein - none -
fig|6666666.65901.peg.935 CDS gi|507574582|emb|CAVS020000025.1| 75279 75812 3 + 534 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65901.peg.936 CDS gi|507574582|emb|CAVS020000025.1| 75809 76423 2 + 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65901.peg.937 CDS gi|507574582|emb|CAVS020000025.1| 76436 77512 2 + 1077 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65901.peg.938 CDS gi|507574582|emb|CAVS020000025.1| 77669 79594 2 + 1926 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65901.peg.939 CDS gi|507574582|emb|CAVS020000025.1| 79597 80808 1 + 1212 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65901.peg.940 CDS gi|507574582|emb|CAVS020000025.1| 80870 82444 2 + 1575 dipeptide-binding protein DciAE - none -
fig|6666666.65901.peg.941 CDS gi|507574582|emb|CAVS020000025.1| 82462 83037 1 + 576 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65901.peg.942 CDS gi|507574582|emb|CAVS020000025.1| 83085 85361 3 + 2277 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65901.peg.943 CDS gi|507574582|emb|CAVS020000025.1| 85547 87601 2 + 2055 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.65901.peg.944 CDS gi|507574582|emb|CAVS020000025.1| 88128 87829 -3 - 300 hypothetical protein - none -
fig|6666666.65901.peg.945 CDS gi|507574582|emb|CAVS020000025.1| 89230 88271 -1 - 960 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65901.peg.946 CDS gi|507574582|emb|CAVS020000025.1| 89338 89973 1 + 636 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.65901.peg.947 CDS gi|507574582|emb|CAVS020000025.1| 90022 91320 1 + 1299 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65901.peg.948 CDS gi|507574582|emb|CAVS020000025.1| 92711 91317 -2 - 1395 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65901.peg.949 CDS gi|507574582|emb|CAVS020000025.1| 93498 92767 -3 - 732 Putative CBS domain containing protein - none -
fig|6666666.65901.peg.950 CDS gi|507574585|emb|CAVS020000024.1| 569 300 -2 - 270 hypothetical protein - none -
fig|6666666.65901.peg.951 CDS gi|507574585|emb|CAVS020000024.1| 564 2399 3 + 1836 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65901.peg.952 CDS gi|507574585|emb|CAVS020000024.1| 2517 2957 3 + 441 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65901.peg.953 CDS gi|507574585|emb|CAVS020000024.1| 2950 3951 1 + 1002 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.65901.peg.954 CDS gi|507574585|emb|CAVS020000024.1| 3944 5281 2 + 1338 putative DNA-damage-inducible protein F - none -
fig|6666666.65901.peg.955 CDS gi|507574585|emb|CAVS020000024.1| 5278 6078 1 + 801 putative SimX4 homolog - none -
fig|6666666.65901.peg.956 CDS gi|507574585|emb|CAVS020000024.1| 6078 6740 3 + 663 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.65901.peg.957 CDS gi|507574585|emb|CAVS020000024.1| 7759 6902 -1 - 858 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65901.peg.958 CDS gi|507574585|emb|CAVS020000024.1| 7827 8795 3 + 969 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65901.peg.959 CDS gi|507574585|emb|CAVS020000024.1| 8792 9754 2 + 963 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.960 CDS gi|507574585|emb|CAVS020000024.1| 9858 10127 3 + 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.65901.peg.961 CDS gi|507574585|emb|CAVS020000024.1| 10492 12780 1 + 2289 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65901.peg.962 CDS gi|507574585|emb|CAVS020000024.1| 14459 12855 -2 - 1605 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65901.peg.963 CDS gi|507574585|emb|CAVS020000024.1| 14727 14990 3 + 264 hypothetical protein - none -
fig|6666666.65901.peg.964 CDS gi|507574585|emb|CAVS020000024.1| 15247 14987 -1 - 261 hypothetical protein - none -
fig|6666666.65901.peg.965 CDS gi|507574585|emb|CAVS020000024.1| 15814 15257 -1 - 558 No significant database matches - none -
fig|6666666.65901.peg.966 CDS gi|507574585|emb|CAVS020000024.1| 16011 16754 3 + 744 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65901.peg.967 CDS gi|507574585|emb|CAVS020000024.1| 16755 17387 3 + 633 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65901.peg.968 CDS gi|507574585|emb|CAVS020000024.1| 17424 18332 3 + 909 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65901.peg.969 CDS gi|507574585|emb|CAVS020000024.1| 18335 20473 2 + 2139 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.65901.peg.970 CDS gi|507574585|emb|CAVS020000024.1| 20724 21011 3 + 288 hypothetical protein - none -
fig|6666666.65901.peg.971 CDS gi|507574585|emb|CAVS020000024.1| 21080 21538 2 + 459 hypothetical protein - none -
fig|6666666.65901.peg.972 CDS gi|507574585|emb|CAVS020000024.1| 21549 22175 3 + 627 hypothetical protein - none -
fig|6666666.65901.peg.973 CDS gi|507574585|emb|CAVS020000024.1| 22324 25425 1 + 3102 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65901.peg.974 CDS gi|507574585|emb|CAVS020000024.1| 25842 27017 3 + 1176 Integral membrane protein TerC - none -
fig|6666666.65901.peg.975 CDS gi|507574585|emb|CAVS020000024.1| 27305 27021 -2 - 285 hypothetical protein - none -
fig|6666666.65901.peg.976 CDS gi|507574585|emb|CAVS020000024.1| 27334 27894 1 + 561 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.977 CDS gi|507574588|emb|CAVS020000023.1| 3166 350 -1 - 2817 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65901.peg.978 CDS gi|507574588|emb|CAVS020000023.1| 3358 3756 1 + 399 hypothetical protein - none -
fig|6666666.65901.peg.979 CDS gi|507574588|emb|CAVS020000023.1| 4733 4308 -2 - 426 hypothetical protein - none -
fig|6666666.65901.peg.980 CDS gi|507574588|emb|CAVS020000023.1| 5627 4764 -2 - 864 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65901.peg.981 CDS gi|507574588|emb|CAVS020000023.1| 6152 5676 -2 - 477 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.65901.peg.982 CDS gi|507574588|emb|CAVS020000023.1| 6774 6142 -3 - 633 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.65901.peg.983 CDS gi|507574588|emb|CAVS020000023.1| 6811 7944 1 + 1134 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.65901.peg.984 CDS gi|507574588|emb|CAVS020000023.1| 7954 8634 1 + 681 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.65901.peg.985 CDS gi|507574588|emb|CAVS020000023.1| 8638 9753 1 + 1116 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.65901.peg.986 CDS gi|507574588|emb|CAVS020000023.1| 10368 11753 3 + 1386 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65901.peg.987 CDS gi|507574588|emb|CAVS020000023.1| 12929 11769 -2 - 1161 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.65901.peg.988 CDS gi|507574588|emb|CAVS020000023.1| 13012 13218 1 + 207 FIG00544054: hypothetical protein - none -
fig|6666666.65901.peg.989 CDS gi|507574588|emb|CAVS020000023.1| 14799 13225 -3 - 1575 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65901.peg.990 CDS gi|507574588|emb|CAVS020000023.1| 14883 16217 3 + 1335 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.991 CDS gi|507574588|emb|CAVS020000023.1| 16214 19228 2 + 3015 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.65901.peg.992 CDS gi|507574588|emb|CAVS020000023.1| 19393 19692 1 + 300 hypothetical protein - none -
fig|6666666.65901.peg.993 CDS gi|507574588|emb|CAVS020000023.1| 19718 21169 2 + 1452 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65901.peg.994 CDS gi|507574588|emb|CAVS020000023.1| 21195 21347 3 + 153 FIG00545201: hypothetical protein - none -
fig|6666666.65901.peg.995 CDS gi|507574588|emb|CAVS020000023.1| 21418 22434 1 + 1017 hypothetical protein - none -
fig|6666666.65901.peg.996 CDS gi|507574588|emb|CAVS020000023.1| 23071 22415 -1 - 657 hypothetical protein - none -
fig|6666666.65901.peg.997 CDS gi|507574588|emb|CAVS020000023.1| 23165 23689 2 + 525 MutT/NUDIX family protein - none -
fig|6666666.65901.peg.998 CDS gi|507574588|emb|CAVS020000023.1| 23686 24240 1 + 555 possible glycosyl hydrolase - none -
fig|6666666.65901.peg.999 CDS gi|507574588|emb|CAVS020000023.1| 24329 25366 2 + 1038 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.1000 CDS gi|507574588|emb|CAVS020000023.1| 26290 25421 -1 - 870 FIG00544618: hypothetical protein - none -
fig|6666666.65901.peg.1001 CDS gi|507574588|emb|CAVS020000023.1| 27073 26447 -1 - 627 FIG00546509: hypothetical protein - none -
fig|6666666.65901.peg.1002 CDS gi|507574588|emb|CAVS020000023.1| 28559 27123 -2 - 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1003 CDS gi|507574588|emb|CAVS020000023.1| 28634 29110 2 + 477 hypothetical protein - none -
fig|6666666.65901.peg.1004 CDS gi|507574588|emb|CAVS020000023.1| 30396 29107 -3 - 1290 Integral membrane protein - none -
fig|6666666.65901.peg.1005 CDS gi|507574588|emb|CAVS020000023.1| 31190 30393 -2 - 798 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65901.peg.1006 CDS gi|507574588|emb|CAVS020000023.1| 32270 31227 -2 - 1044 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65901.peg.1007 CDS gi|507574588|emb|CAVS020000023.1| 33061 32276 -1 - 786 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65901.peg.1008 CDS gi|507574588|emb|CAVS020000023.1| 33476 33090 -2 - 387 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65901.peg.1009 CDS gi|507574588|emb|CAVS020000023.1| 34552 33479 -1 - 1074 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65901.peg.1010 CDS gi|507574588|emb|CAVS020000023.1| 37378 34565 -1 - 2814 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65901.peg.1011 CDS gi|507574588|emb|CAVS020000023.1| 39029 37455 -2 - 1575 Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) Dihydroxyacetone kinases
fig|6666666.65901.peg.1012 CDS gi|507574588|emb|CAVS020000023.1| 41317 39212 -1 - 2106 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.65901.peg.1013 CDS gi|507574588|emb|CAVS020000023.1| 41428 41847 1 + 420 Putative oxidoreductase - none -
fig|6666666.65901.peg.1014 CDS gi|507574588|emb|CAVS020000023.1| 43435 41948 -1 - 1488 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65901.peg.1015 CDS gi|507574588|emb|CAVS020000023.1| 43505 44611 2 + 1107 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65901.peg.1016 CDS gi|507574588|emb|CAVS020000023.1| 45594 44608 -3 - 987 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.65901.peg.1017 CDS gi|507574588|emb|CAVS020000023.1| 46311 45598 -3 - 714 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65901.peg.1018 CDS gi|507574588|emb|CAVS020000023.1| 46451 46795 2 + 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65901.peg.1019 CDS gi|507574588|emb|CAVS020000023.1| 47843 46860 -2 - 984 nisin-resistance protein - none -
fig|6666666.65901.peg.1020 CDS gi|507574588|emb|CAVS020000023.1| 49840 47918 -1 - 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65901.peg.1021 CDS gi|507574588|emb|CAVS020000023.1| 50186 51280 2 + 1095 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65901.peg.1022 CDS gi|507574588|emb|CAVS020000023.1| 51299 51730 2 + 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.65901.peg.1023 CDS gi|507574588|emb|CAVS020000023.1| 52133 52753 2 + 621 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65901.peg.1024 CDS gi|507574588|emb|CAVS020000023.1| 52817 53665 2 + 849 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65901.peg.1025 CDS gi|507574588|emb|CAVS020000023.1| 53662 54882 1 + 1221 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65901.peg.1026 CDS gi|507574588|emb|CAVS020000023.1| 54882 56513 3 + 1632 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65901.peg.1027 CDS gi|507574588|emb|CAVS020000023.1| 57039 57809 3 + 771 putative secreted protein - none -
fig|6666666.65901.peg.1028 CDS gi|507574588|emb|CAVS020000023.1| 57970 58992 1 + 1023 NLP/P60 family protein - none -
fig|6666666.65901.peg.1029 CDS gi|507574588|emb|CAVS020000023.1| 58976 60124 2 + 1149 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65901.peg.1030 CDS gi|507574588|emb|CAVS020000023.1| 60154 61089 1 + 936 ROK family protein (putative glucokinase) - none -
fig|6666666.65901.peg.1031 CDS gi|507574588|emb|CAVS020000023.1| 61104 61832 3 + 729 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.1032 CDS gi|507574588|emb|CAVS020000023.1| 61829 62044 2 + 216 hypothetical protein - none -
fig|6666666.65901.peg.1033 CDS gi|507574588|emb|CAVS020000023.1| 62045 62557 2 + 513 FIG00544385: hypothetical protein - none -
fig|6666666.65901.peg.1034 CDS gi|507574588|emb|CAVS020000023.1| 62635 64023 1 + 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65901.peg.1035 CDS gi|507574588|emb|CAVS020000023.1| 65696 64362 -2 - 1335 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65901.peg.1036 CDS gi|507574588|emb|CAVS020000023.1| 67492 65987 -1 - 1506 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65901.peg.1037 CDS gi|507574588|emb|CAVS020000023.1| 68574 67492 -3 - 1083 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.65901.peg.1038 CDS gi|507574588|emb|CAVS020000023.1| 69181 68618 -1 - 564 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65901.peg.1039 CDS gi|507574588|emb|CAVS020000023.1| 69370 69771 1 + 402 hypothetical protein - none -
fig|6666666.65901.peg.1040 CDS gi|507574588|emb|CAVS020000023.1| 69892 70254 1 + 363 hypothetical protein - none -
fig|6666666.65901.peg.1041 CDS gi|507574588|emb|CAVS020000023.1| 70671 71105 3 + 435 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65901.peg.1042 CDS gi|507574588|emb|CAVS020000023.1| 71297 72310 2 + 1014 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65901.peg.1043 CDS gi|507574588|emb|CAVS020000023.1| 72461 72985 2 + 525 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.65901.peg.1044 CDS gi|507574588|emb|CAVS020000023.1| 73084 75066 1 + 1983 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1045 CDS gi|507574588|emb|CAVS020000023.1| 75088 76572 1 + 1485 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65901.peg.1046 CDS gi|507574588|emb|CAVS020000023.1| 76569 78089 3 + 1521 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65901.peg.1047 CDS gi|507574588|emb|CAVS020000023.1| 78126 79226 3 + 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1048 CDS gi|507574588|emb|CAVS020000023.1| 79223 80626 2 + 1404 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65901.peg.1049 CDS gi|507574588|emb|CAVS020000023.1| 80783 82078 2 + 1296 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65901.peg.1050 CDS gi|507574588|emb|CAVS020000023.1| 82086 83168 3 + 1083 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1051 CDS gi|507574588|emb|CAVS020000023.1| 83165 84586 2 + 1422 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65901.peg.1052 CDS gi|507574588|emb|CAVS020000023.1| 84588 85235 3 + 648 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65901.peg.1053 CDS gi|507574588|emb|CAVS020000023.1| 85321 86559 1 + 1239 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65901.peg.1054 CDS gi|507574588|emb|CAVS020000023.1| 86574 87299 3 + 726 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65901.peg.1055 CDS gi|507574588|emb|CAVS020000023.1| 87292 87990 1 + 699 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65901.peg.1056 CDS gi|507574588|emb|CAVS020000023.1| 88030 88524 1 + 495 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65901.peg.1057 CDS gi|507574588|emb|CAVS020000023.1| 88543 88854 1 + 312 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65901.peg.1058 CDS gi|507574588|emb|CAVS020000023.1| 88981 89946 1 + 966 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.65901.peg.1059 CDS gi|507574588|emb|CAVS020000023.1| 90186 93362 3 + 3177 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65901.peg.1060 CDS gi|507574588|emb|CAVS020000023.1| 93749 95047 2 + 1299 hypothetical protein; putative His-Me finger endonuclease domain - none -
fig|6666666.65901.peg.1061 CDS gi|507574588|emb|CAVS020000023.1| 95082 96473 3 + 1392 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65901.peg.1062 CDS gi|507574588|emb|CAVS020000023.1| 97352 96462 -2 - 891 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65901.peg.1063 CDS gi|507574588|emb|CAVS020000023.1| 97427 98005 2 + 579 Putative secreted protein - none -
fig|6666666.65901.peg.1064 CDS gi|507574588|emb|CAVS020000023.1| 98940 98002 -3 - 939 hypothetical protein - none -
fig|6666666.65901.peg.1065 CDS gi|507574588|emb|CAVS020000023.1| 99013 99522 1 + 510 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65901.peg.1066 CDS gi|507574588|emb|CAVS020000023.1| 99512 100441 2 + 930 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65901.peg.1067 CDS gi|507574588|emb|CAVS020000023.1| 100442 100936 2 + 495 hypothetical protein - none -
fig|6666666.65901.peg.1068 CDS gi|507574588|emb|CAVS020000023.1| 100988 102742 2 + 1755 hypothetical protein - none -
fig|6666666.65901.peg.1069 CDS gi|507574588|emb|CAVS020000023.1| 102743 103480 2 + 738 ABC-type transporter, ATPase component - none -
fig|6666666.65901.peg.1070 CDS gi|507574588|emb|CAVS020000023.1| 103481 104749 2 + 1269 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) - none -
fig|6666666.65901.peg.1071 CDS gi|507574588|emb|CAVS020000023.1| 104798 108367 2 + 3570 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65901.peg.1072 CDS gi|507574588|emb|CAVS020000023.1| 108962 108441 -2 - 522 hypothetical protein - none -
fig|6666666.65901.peg.1073 CDS gi|507574588|emb|CAVS020000023.1| 109454 108999 -2 - 456 hypothetical protein - none -
fig|6666666.65901.peg.1074 CDS gi|507574588|emb|CAVS020000023.1| 111467 109608 -2 - 1860 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.65901.peg.1075 CDS gi|507574588|emb|CAVS020000023.1| 111604 112905 1 + 1302 Threonine dehydratase (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis;
Threonine degradation
fig|6666666.65901.peg.1076 CDS gi|507574588|emb|CAVS020000023.1| 112910 113551 2 + 642 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.65901.peg.1077 CDS gi|507574588|emb|CAVS020000023.1| 113571 113804 3 + 234 hypothetical protein - none -
fig|6666666.65901.peg.1078 CDS gi|507574588|emb|CAVS020000023.1| 113821 114189 1 + 369 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65901.peg.1079 CDS gi|507574588|emb|CAVS020000023.1| 115189 114191 -1 - 999 FIG00544169: hypothetical protein - none -
fig|6666666.65901.peg.1080 CDS gi|507574588|emb|CAVS020000023.1| 117630 115255 -3 - 2376 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65901.peg.1081 CDS gi|507574588|emb|CAVS020000023.1| 118162 117641 -1 - 522 hypothetical protein - none -
fig|6666666.65901.peg.1082 CDS gi|507574588|emb|CAVS020000023.1| 119671 118277 -1 - 1395 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65901.peg.1083 CDS gi|507574588|emb|CAVS020000023.1| 121839 119671 -3 - 2169 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65901.peg.1084 CDS gi|507574588|emb|CAVS020000023.1| 122410 121862 -1 - 549 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.65901.peg.1085 CDS gi|507574588|emb|CAVS020000023.1| 122657 123397 2 + 741 hypothetical protein - none -
fig|6666666.65901.peg.1086 CDS gi|507574588|emb|CAVS020000023.1| 123451 123906 1 + 456 hypothetical membrane protein - none -
fig|6666666.65901.peg.1087 CDS gi|507574588|emb|CAVS020000023.1| 124955 123903 -2 - 1053 hypothetical protein - none -
fig|6666666.65901.peg.1088 CDS gi|507574588|emb|CAVS020000023.1| 125057 125236 2 + 180 hypothetical protein - none -
fig|6666666.65901.peg.1089 CDS gi|507574588|emb|CAVS020000023.1| 125238 126536 3 + 1299 putative transport protein - none -
fig|6666666.65901.peg.1090 CDS gi|507574588|emb|CAVS020000023.1| 126564 127193 3 + 630 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) - none -
fig|6666666.65901.peg.1091 CDS gi|507574588|emb|CAVS020000023.1| 127198 128010 1 + 813 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) - none -
fig|6666666.65901.peg.1092 CDS gi|507574588|emb|CAVS020000023.1| 128014 128715 1 + 702 Tryptophan-associated membrane protein Tryptophan synthesis
fig|6666666.65901.peg.1093 CDS gi|507574588|emb|CAVS020000023.1| 128760 129578 3 + 819 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65901.peg.1094 CDS gi|507574588|emb|CAVS020000023.1| 129596 130555 2 + 960 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65901.peg.1095 CDS gi|507574588|emb|CAVS020000023.1| 130518 131972 3 + 1455 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65901.peg.1096 CDS gi|507574588|emb|CAVS020000023.1| 131985 134402 3 + 2418 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65901.peg.1097 CDS gi|507574588|emb|CAVS020000023.1| 135181 134441 -1 - 741 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65901.peg.1098 CDS gi|507574588|emb|CAVS020000023.1| 137015 135174 -2 - 1842 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65901.peg.1099 CDS gi|507574588|emb|CAVS020000023.1| 139459 137075 -1 - 2385 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65901.peg.1100 CDS gi|507574588|emb|CAVS020000023.1| 140765 139512 -2 - 1254 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.1101 CDS gi|507574588|emb|CAVS020000023.1| 142121 140769 -2 - 1353 No significant database matches - none -
fig|6666666.65901.peg.1102 CDS gi|507574588|emb|CAVS020000023.1| 142141 142530 1 + 390 FIG00544156: hypothetical protein - none -
fig|6666666.65901.peg.1103 CDS gi|507574588|emb|CAVS020000023.1| 143627 142500 -2 - 1128 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65901.peg.1104 CDS gi|507574588|emb|CAVS020000023.1| 143728 145074 1 + 1347 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65901.peg.1105 CDS gi|507574588|emb|CAVS020000023.1| 145101 145823 3 + 723 Cell division initiation protein - none -
fig|6666666.65901.peg.1106 CDS gi|507574588|emb|CAVS020000023.1| 145843 146379 1 + 537 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65901.peg.1107 CDS gi|507574588|emb|CAVS020000023.1| 146376 147140 3 + 765 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65901.peg.1108 CDS gi|507574588|emb|CAVS020000023.1| 147133 147954 1 + 822 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65901.peg.1109 CDS gi|507574588|emb|CAVS020000023.1| 147977 148483 2 + 507 NADH-FMN oxidoreductase - none -
fig|6666666.65901.peg.1110 CDS gi|507574588|emb|CAVS020000023.1| 148538 150046 2 + 1509 amino acid carrier protein - none -
fig|6666666.65901.peg.1111 CDS gi|507574588|emb|CAVS020000023.1| 150068 151888 2 + 1821 hypothetical protein - none -
fig|6666666.65901.peg.1112 CDS gi|507574588|emb|CAVS020000023.1| 151924 152193 1 + 270 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65901.peg.1113 CDS gi|507574588|emb|CAVS020000023.1| 152647 156102 1 + 3456 Chromosome partition protein smc - none -
fig|6666666.65901.peg.1114 CDS gi|507574588|emb|CAVS020000023.1| 156131 157762 2 + 1632 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65901.peg.1115 CDS gi|507574588|emb|CAVS020000023.1| 157884 159515 3 + 1632 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65901.peg.1116 CDS gi|507574588|emb|CAVS020000023.1| 161989 159836 -1 - 2154 O-antigen acetylase - none -
fig|6666666.65901.peg.1117 CDS gi|507574588|emb|CAVS020000023.1| 162373 162870 1 + 498 SSU ribosomal protein S16p - none -
fig|6666666.65901.peg.1118 CDS gi|507574588|emb|CAVS020000023.1| 163164 163664 3 + 501 16S rRNA processing protein RimM - none -
fig|6666666.65901.peg.1119 CDS gi|507574588|emb|CAVS020000023.1| 163657 164721 1 + 1065 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.65901.peg.1120 CDS gi|507574588|emb|CAVS020000023.1| 164816 166201 2 + 1386 Putative anaerobic c4-dicarboxylate transport protein - none -
fig|6666666.65901.peg.1121 CDS gi|507574588|emb|CAVS020000023.1| 166238 168508 2 + 2271 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65901.peg.1122 CDS gi|507574588|emb|CAVS020000023.1| 168623 168970 2 + 348 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65901.peg.1123 CDS gi|507574588|emb|CAVS020000023.1| 170983 169139 -1 - 1845 hypothetical protein - none -
fig|6666666.65901.peg.1124 CDS gi|507574588|emb|CAVS020000023.1| 171130 171963 1 + 834 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65901.peg.1125 CDS gi|507574588|emb|CAVS020000023.1| 171968 172624 2 + 657 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.65901.peg.1126 CDS gi|507574588|emb|CAVS020000023.1| 172621 172926 1 + 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65901.peg.1127 CDS gi|507574588|emb|CAVS020000023.1| 173511 173245 -3 - 267 hypothetical protein - none -
fig|6666666.65901.peg.1128 CDS gi|507574588|emb|CAVS020000023.1| 173521 173793 1 + 273 hypothetical protein - none -
fig|6666666.65901.peg.1129 CDS gi|507574588|emb|CAVS020000023.1| 173798 175306 2 + 1509 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65901.peg.1130 CDS gi|507574588|emb|CAVS020000023.1| 175307 176482 2 + 1176 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65901.peg.1131 CDS gi|507574588|emb|CAVS020000023.1| 176528 177400 2 + 873 Tyrosine recombinase XerC - none -
fig|6666666.65901.peg.1132 CDS gi|507574588|emb|CAVS020000023.1| 177902 177363 -2 - 540 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.65901.peg.1133 CDS gi|507574588|emb|CAVS020000023.1| 178247 178008 -2 - 240 hypothetical protein - none -
fig|6666666.65901.peg.1134 CDS gi|507574588|emb|CAVS020000023.1| 178203 179159 3 + 957 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.65901.peg.1135 CDS gi|507574588|emb|CAVS020000023.1| 179356 180174 1 + 819 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65901.peg.1136 CDS gi|507574588|emb|CAVS020000023.1| 180407 181090 2 + 684 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65901.peg.1137 CDS gi|507574588|emb|CAVS020000023.1| 182169 181087 -3 - 1083 putative amidase - none -
fig|6666666.65901.peg.1138 CDS gi|507574588|emb|CAVS020000023.1| 182247 182804 3 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65901.peg.1139 CDS gi|507574588|emb|CAVS020000023.1| 182811 183761 3 + 951 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.1140 CDS gi|507574588|emb|CAVS020000023.1| 183820 184923 1 + 1104 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.65901.peg.1141 CDS gi|507574588|emb|CAVS020000023.1| 185727 185194 -3 - 534 hypothetical membrane protein - none -
fig|6666666.65901.peg.1142 CDS gi|507574588|emb|CAVS020000023.1| 185914 187077 1 + 1164 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65901.peg.1143 CDS gi|507574588|emb|CAVS020000023.1| 187093 188301 1 + 1209 Membrane-associated zinc metalloprotease - none -
fig|6666666.65901.peg.1144 CDS gi|507574588|emb|CAVS020000023.1| 188322 189485 3 + 1164 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65901.peg.1145 CDS gi|507574588|emb|CAVS020000023.1| 189487 191301 1 + 1815 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1146 CDS gi|507574588|emb|CAVS020000023.1| 191326 192255 1 + 930 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65901.peg.1147 CDS gi|507574588|emb|CAVS020000023.1| 192812 192396 -2 - 417 hypothetical protein - none -
fig|6666666.65901.peg.1148 CDS gi|507574588|emb|CAVS020000023.1| 193276 192866 -1 - 411 hypothetical protein - none -
fig|6666666.65901.peg.1149 CDS gi|507574588|emb|CAVS020000023.1| 195025 193598 -1 - 1428 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65901.peg.1150 CDS gi|507574588|emb|CAVS020000023.1| 196074 195067 -3 - 1008 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65901.peg.1151 CDS gi|507574588|emb|CAVS020000023.1| 196206 197717 3 + 1512 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65901.peg.1152 CDS gi|507574588|emb|CAVS020000023.1| 198929 197724 -2 - 1206 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.65901.peg.1153 CDS gi|507574588|emb|CAVS020000023.1| 198954 199694 3 + 741 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1154 CDS gi|507574588|emb|CAVS020000023.1| 199858 200751 1 + 894 hypothetical protein - none -
fig|6666666.65901.peg.1155 CDS gi|507574588|emb|CAVS020000023.1| 201485 200748 -2 - 738 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65901.peg.1156 CDS gi|507574588|emb|CAVS020000023.1| 202166 202624 2 + 459 hypothetical protein - none -
fig|6666666.65901.peg.1157 CDS gi|507574588|emb|CAVS020000023.1| 203444 202719 -2 - 726 hypothetical protein - none -
fig|6666666.65901.peg.1158 CDS gi|507574588|emb|CAVS020000023.1| 204141 203455 -3 - 687 UPF0246 protein YaaA - none -
fig|6666666.65901.peg.1159 CDS gi|507574588|emb|CAVS020000023.1| 204173 205960 2 + 1788 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65901.peg.1160 CDS gi|507574588|emb|CAVS020000023.1| 206806 205982 -1 - 825 hypothetical protein - none -
fig|6666666.65901.peg.1161 CDS gi|507574588|emb|CAVS020000023.1| 206829 207380 3 + 552 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.65901.peg.1162 CDS gi|507574588|emb|CAVS020000023.1| 207377 208396 2 + 1020 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65901.peg.1163 CDS gi|507574588|emb|CAVS020000023.1| 208539 208871 3 + 333 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65901.peg.1164 CDS gi|507574591|emb|CAVS020000022.1| 8 238 2 + 231 Integral membrane protein - none -
fig|6666666.65901.peg.1165 CDS gi|507574591|emb|CAVS020000022.1| 245 1906 2 + 1662 hypothetical protein - none -
fig|6666666.65901.peg.1166 CDS gi|507574591|emb|CAVS020000022.1| 2322 2531 3 + 210 hypothetical protein - none -
fig|6666666.65901.peg.1167 CDS gi|507574591|emb|CAVS020000022.1| 2512 3915 1 + 1404 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65901.peg.1168 CDS gi|507574591|emb|CAVS020000022.1| 4697 3885 -2 - 813 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.65901.peg.1169 CDS gi|507574591|emb|CAVS020000022.1| 4969 4694 -1 - 276 hypothetical protein - none -
fig|6666666.65901.peg.1170 CDS gi|507574591|emb|CAVS020000022.1| 5005 5565 1 + 561 hypothetical protein - none -
fig|6666666.65901.peg.1171 CDS gi|507574591|emb|CAVS020000022.1| 5538 5849 3 + 312 hypothetical protein - none -
fig|6666666.65901.peg.1172 CDS gi|507574594|emb|CAVS020000021.1| 59 694 2 + 636 Mobile element protein - none -
fig|6666666.65901.peg.1173 CDS gi|507574594|emb|CAVS020000021.1| 1027 1290 1 + 264 hypothetical protein - none -
fig|6666666.65901.peg.1174 CDS gi|507574594|emb|CAVS020000021.1| 1309 1953 1 + 645 hypothetical protein - none -
fig|6666666.65901.peg.1175 CDS gi|507574594|emb|CAVS020000021.1| 3467 2187 -2 - 1281 Transcriptional regulator, XRE family - none -
fig|6666666.65901.peg.1176 CDS gi|507574594|emb|CAVS020000021.1| 5831 4179 -2 - 1653 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65901.peg.1177 CDS gi|507574594|emb|CAVS020000021.1| 5915 6568 2 + 654 hypothetical protein - none -
fig|6666666.65901.peg.1178 CDS gi|507574594|emb|CAVS020000021.1| 6746 7381 2 + 636 hypothetical protein - none -
fig|6666666.65901.peg.1179 CDS gi|507574594|emb|CAVS020000021.1| 7532 8329 2 + 798 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65901.peg.1180 CDS gi|507574594|emb|CAVS020000021.1| 8461 9903 1 + 1443 putative transport protein - none -
fig|6666666.65901.peg.1181 CDS gi|507574594|emb|CAVS020000021.1| 9896 10876 2 + 981 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.1182 CDS gi|507574594|emb|CAVS020000021.1| 11061 11876 3 + 816 hypothetical protein - none -
fig|6666666.65901.peg.1183 CDS gi|507574594|emb|CAVS020000021.1| 11909 12760 2 + 852 hypothetical protein - none -
fig|6666666.65901.peg.1184 CDS gi|507574597|emb|CAVS020000020.1| 1210 527 -1 - 684 hypothetical protein - none -
fig|6666666.65901.peg.1185 CDS gi|507574597|emb|CAVS020000020.1| 1209 1814 3 + 606 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65901.peg.1186 CDS gi|507574597|emb|CAVS020000020.1| 2244 1828 -3 - 417 hypothetical protein - none -
fig|6666666.65901.peg.1187 CDS gi|507574597|emb|CAVS020000020.1| 2446 3186 1 + 741 FIG00545464: hypothetical protein - none -
fig|6666666.65901.peg.1188 CDS gi|507574597|emb|CAVS020000020.1| 3247 4521 1 + 1275 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.65901.peg.1189 CDS gi|507574597|emb|CAVS020000020.1| 4681 5508 1 + 828 hypothetical protein - none -
fig|6666666.65901.peg.1190 CDS gi|507574597|emb|CAVS020000020.1| 6094 5930 -1 - 165 hypothetical protein - none -
fig|6666666.65901.peg.1191 CDS gi|507574597|emb|CAVS020000020.1| 6435 8099 3 + 1665 hypothetical protein - none -
fig|6666666.65901.peg.1192 CDS gi|507574597|emb|CAVS020000020.1| 8124 8714 3 + 591 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65901.peg.1193 CDS gi|507574597|emb|CAVS020000020.1| 8730 9302 3 + 573 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65901.peg.1194 CDS gi|507574597|emb|CAVS020000020.1| 9299 10222 2 + 924 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65901.peg.1195 CDS gi|507574597|emb|CAVS020000020.1| 10507 10235 -1 - 273 hypothetical protein - none -
fig|6666666.65901.peg.1196 CDS gi|507574597|emb|CAVS020000020.1| 10624 11787 1 + 1164 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) Sialic Acid Metabolism
fig|6666666.65901.peg.1197 CDS gi|507574597|emb|CAVS020000020.1| 11894 13159 2 + 1266 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65901.peg.1198 CDS gi|507574597|emb|CAVS020000020.1| 13335 14633 3 + 1299 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65901.peg.1199 CDS gi|507574597|emb|CAVS020000020.1| 14614 16047 1 + 1434 glycosyl transferase, group 1 - none -
fig|6666666.65901.peg.1200 CDS gi|507574597|emb|CAVS020000020.1| 16093 17991 1 + 1899 Conserved domain protein - none -
fig|6666666.65901.peg.1201 CDS gi|507574597|emb|CAVS020000020.1| 19497 18793 -3 - 705 hypothetical protein - none -
fig|6666666.65901.peg.1202 CDS gi|507574597|emb|CAVS020000020.1| 20548 22125 1 + 1578 hypothetical protein - none -
fig|6666666.65901.peg.1203 CDS gi|507574597|emb|CAVS020000020.1| 22517 25192 2 + 2676 hypothetical protein - none -
fig|6666666.65901.peg.1204 CDS gi|507574597|emb|CAVS020000020.1| 25230 27410 3 + 2181 conserved domain protein - none -
fig|6666666.65901.peg.1205 CDS gi|507574597|emb|CAVS020000020.1| 29794 27905 -1 - 1890 hypothetical protein - none -
fig|6666666.65901.peg.1206 CDS gi|507574597|emb|CAVS020000020.1| 31206 36269 3 + 5064 hypothetical protein - none -
fig|6666666.65901.peg.1207 CDS gi|507574597|emb|CAVS020000020.1| 36324 37262 3 + 939 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65901.peg.1208 CDS gi|507574597|emb|CAVS020000020.1| 37415 37266 -2 - 150 ThiJ/PfpI family protein - none -
fig|6666666.65901.peg.1209 CDS gi|507574597|emb|CAVS020000020.1| 38569 37571 -1 - 999 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.65901.peg.1210 CDS gi|507574600|emb|CAVS020000019.1| 64 330 1 + 267 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65901.peg.1211 CDS gi|507574603|emb|CAVS020000018.1| 4 483 1 + 480 possible sugar transferase - none -
fig|6666666.65901.peg.1212 CDS gi|507574603|emb|CAVS020000018.1| 491 1246 2 + 756 putative N-formylglutamate aminohydrolase - none -
fig|6666666.65901.peg.1213 CDS gi|507574603|emb|CAVS020000018.1| 2345 1308 -2 - 1038 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.1214 CDS gi|507574603|emb|CAVS020000018.1| 3855 2455 -3 - 1401 hypothetical protein - none -
fig|6666666.65901.peg.1215 CDS gi|507574603|emb|CAVS020000018.1| 4817 3888 -2 - 930 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.65901.peg.1216 CDS gi|507574603|emb|CAVS020000018.1| 5600 4827 -2 - 774 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.65901.peg.1217 CDS gi|507574603|emb|CAVS020000018.1| 6452 5661 -2 - 792 FIG00997919: hypothetical protein - none -
fig|6666666.65901.peg.1218 CDS gi|507574603|emb|CAVS020000018.1| 6906 8267 3 + 1362 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65901.peg.1219 CDS gi|507574603|emb|CAVS020000018.1| 8646 9242 3 + 597 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65901.peg.1220 CDS gi|507574603|emb|CAVS020000018.1| 9273 9893 3 + 621 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65901.peg.1221 CDS gi|507574603|emb|CAVS020000018.1| 10598 9957 -2 - 642 hypothetical protein - none -
fig|6666666.65901.peg.1222 CDS gi|507574603|emb|CAVS020000018.1| 10786 12066 1 + 1281 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65901.peg.1223 CDS gi|507574603|emb|CAVS020000018.1| 12810 12085 -3 - 726 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.1224 CDS gi|507574603|emb|CAVS020000018.1| 12954 13907 3 + 954 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65901.peg.1225 CDS gi|507574603|emb|CAVS020000018.1| 13930 16641 1 + 2712 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65901.peg.1226 CDS gi|507574603|emb|CAVS020000018.1| 16642 18135 1 + 1494 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65901.peg.1227 CDS gi|507574603|emb|CAVS020000018.1| 18132 18557 3 + 426 Putative membrane protein - none -
fig|6666666.65901.peg.1228 CDS gi|507574603|emb|CAVS020000018.1| 19975 18566 -1 - 1410 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.1229 CDS gi|507574603|emb|CAVS020000018.1| 20001 20306 3 + 306 hypothetical protein - none -
fig|6666666.65901.peg.1230 CDS gi|507574603|emb|CAVS020000018.1| 20335 20745 1 + 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.65901.peg.1231 CDS gi|507574603|emb|CAVS020000018.1| 20881 21441 1 + 561 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.1232 CDS gi|507574603|emb|CAVS020000018.1| 21628 24348 1 + 2721 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.65901.peg.1233 CDS gi|507574603|emb|CAVS020000018.1| 24533 24838 2 + 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65901.peg.1234 CDS gi|507574603|emb|CAVS020000018.1| 24859 25203 1 + 345 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65901.peg.1235 CDS gi|507574603|emb|CAVS020000018.1| 25294 26799 1 + 1506 COG0536: GTP-binding protein Obg - none -
fig|6666666.65901.peg.1236 CDS gi|507574603|emb|CAVS020000018.1| 26821 27747 1 + 927 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.65901.peg.1237 CDS gi|507574603|emb|CAVS020000018.1| 27766 28674 1 + 909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65901.peg.1238 CDS gi|507574603|emb|CAVS020000018.1| 28824 29345 3 + 522 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65901.peg.1239 CDS gi|507574603|emb|CAVS020000018.1| 29355 30290 3 + 936 FIG00544655: hypothetical protein - none -
fig|6666666.65901.peg.1240 CDS gi|507574603|emb|CAVS020000018.1| 30290 30688 2 + 399 hypothetical protein - none -
fig|6666666.65901.peg.1241 CDS gi|507574603|emb|CAVS020000018.1| 30695 31315 2 + 621 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65901.peg.1242 CDS gi|507574603|emb|CAVS020000018.1| 31381 31854 1 + 474 Iojap protein - none -
fig|6666666.65901.peg.1243 CDS gi|507574603|emb|CAVS020000018.1| 31858 32490 1 + 633 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.65901.peg.1244 CDS gi|507574603|emb|CAVS020000018.1| 32491 33291 1 + 801 Hypothetical protein DUF194, DegV family - none -
fig|6666666.65901.peg.1245 CDS gi|507574603|emb|CAVS020000018.1| 33385 34041 1 + 657 Competence protein - none -
fig|6666666.65901.peg.1246 CDS gi|507574603|emb|CAVS020000018.1| 34045 34701 1 + 657 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.65901.peg.1247 CDS gi|507574603|emb|CAVS020000018.1| 35030 35206 2 + 177 hypothetical protein - none -
fig|6666666.65901.peg.1248 CDS gi|507574603|emb|CAVS020000018.1| 35301 36551 3 + 1251 Transposase - none -
fig|6666666.65901.peg.1249 CDS gi|507574603|emb|CAVS020000018.1| 36652 37677 1 + 1026 integrase, putative - none -
fig|6666666.65901.peg.1250 CDS gi|507574603|emb|CAVS020000018.1| 38111 38446 2 + 336 Transposon Tn21 resolvase - none -
fig|6666666.65901.peg.1251 CDS gi|507574603|emb|CAVS020000018.1| 39081 38656 -3 - 426 hypothetical protein - none -
fig|6666666.65901.peg.1252 CDS gi|507574603|emb|CAVS020000018.1| 39198 40256 3 + 1059 hypothetical protein - none -
fig|6666666.65901.peg.1253 CDS gi|507574603|emb|CAVS020000018.1| 40295 41422 2 + 1128 hypothetical protein - none -
fig|6666666.65901.peg.1254 CDS gi|507574603|emb|CAVS020000018.1| 41616 42179 3 + 564 hypothetical protein - none -
fig|6666666.65901.peg.1255 CDS gi|507574603|emb|CAVS020000018.1| 45098 42231 -2 - 2868 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.65901.peg.1256 CDS gi|507574603|emb|CAVS020000018.1| 46750 45107 -1 - 1644 hypothetical protein - none -
fig|6666666.65901.peg.1257 CDS gi|507574603|emb|CAVS020000018.1| 49959 47902 -3 - 2058 hypothetical protein - none -
fig|6666666.65901.peg.1258 CDS gi|507574603|emb|CAVS020000018.1| 51035 50049 -2 - 987 Mobile element protein - none -
fig|6666666.65901.peg.1259 CDS gi|507574603|emb|CAVS020000018.1| 52276 51032 -1 - 1245 transporter, putative - none -
fig|6666666.65901.peg.1260 CDS gi|507574603|emb|CAVS020000018.1| 53682 52273 -3 - 1410 putative ABC transporter permease protein - none -
fig|6666666.65901.peg.1261 CDS gi|507574603|emb|CAVS020000018.1| 55166 56119 2 + 954 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.65901.peg.1262 CDS gi|507574603|emb|CAVS020000018.1| 56164 57099 1 + 936 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65901.peg.1263 CDS gi|507574603|emb|CAVS020000018.1| 57096 57743 3 + 648 L-lysine permease - none -
fig|6666666.65901.peg.1264 CDS gi|507574603|emb|CAVS020000018.1| 58726 57740 -1 - 987 hypothetical protein - none -
fig|6666666.65901.peg.1265 CDS gi|507574603|emb|CAVS020000018.1| 59081 58818 -2 - 264 SSU ribosomal protein S20p - none -
fig|6666666.65901.peg.1266 CDS gi|507574603|emb|CAVS020000018.1| 59775 59269 -3 - 507 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65901.peg.1267 CDS gi|507574603|emb|CAVS020000018.1| 60678 59809 -3 - 870 hypothetical protein - none -
fig|6666666.65901.peg.1268 CDS gi|507574603|emb|CAVS020000018.1| 60725 62599 2 + 1875 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65901.peg.1269 CDS gi|507574603|emb|CAVS020000018.1| 64591 62600 -1 - 1992 hypothetical protein - none -
fig|6666666.65901.peg.1270 CDS gi|507574603|emb|CAVS020000018.1| 64608 65825 3 + 1218 Proline iminopeptidase (EC 3.4.11.5) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65901.peg.1271 CDS gi|507574603|emb|CAVS020000018.1| 65825 65941 2 + 117 hypothetical protein - none -
fig|6666666.65901.peg.1272 CDS gi|507574603|emb|CAVS020000018.1| 66828 65938 -3 - 891 Ribokinase (EC 2.7.1.15) D-ribose utilization
fig|6666666.65901.peg.1273 CDS gi|507574603|emb|CAVS020000018.1| 68189 66858 -2 - 1332 Oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein - none -
fig|6666666.65901.peg.1274 CDS gi|507574603|emb|CAVS020000018.1| 68955 68176 -3 - 780 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65901.peg.1275 CDS gi|507574603|emb|CAVS020000018.1| 69875 68952 -2 - 924 putative ABC transporter permease protein - none -
fig|6666666.65901.peg.1276 CDS gi|507574603|emb|CAVS020000018.1| 71281 69872 -1 - 1410 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65901.peg.1277 CDS gi|507574603|emb|CAVS020000018.1| 72089 71310 -2 - 780 Transcriptional regulator, GntR family - none -
fig|6666666.65901.peg.1278 CDS gi|507574603|emb|CAVS020000018.1| 73193 72210 -2 - 984 FIG00546389: hypothetical protein - none -
fig|6666666.65901.peg.1279 CDS gi|507574603|emb|CAVS020000018.1| 74637 73207 -3 - 1431 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65901.peg.1280 CDS gi|507574603|emb|CAVS020000018.1| 75777 74725 -3 - 1053 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.65901.peg.1281 CDS gi|507574603|emb|CAVS020000018.1| 78295 75779 -1 - 2517 Probable conserved integral membrane protein - none -
fig|6666666.65901.peg.1282 CDS gi|507574603|emb|CAVS020000018.1| 80191 78341 -1 - 1851 putative ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.1283 CDS gi|507574603|emb|CAVS020000018.1| 80266 80862 1 + 597 FIG00545146: hypothetical protein - none -
fig|6666666.65901.peg.1284 CDS gi|507574603|emb|CAVS020000018.1| 81632 80859 -2 - 774 putative carboxylesterase - none -
fig|6666666.65901.peg.1285 CDS gi|507574603|emb|CAVS020000018.1| 81665 83620 2 + 1956 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.65901.peg.1286 CDS gi|507574603|emb|CAVS020000018.1| 83717 84898 2 + 1182 hypothetical protein - none -
fig|6666666.65901.peg.1287 CDS gi|507574603|emb|CAVS020000018.1| 84910 85062 1 + 153 hypothetical protein - none -
fig|6666666.65901.peg.1288 CDS gi|507574603|emb|CAVS020000018.1| 85087 85227 1 + 141 FIG00545202: hypothetical protein - none -
fig|6666666.65901.peg.1289 CDS gi|507574603|emb|CAVS020000018.1| 87368 85224 -2 - 2145 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65901.peg.1290 CDS gi|507574603|emb|CAVS020000018.1| 87413 89251 2 + 1839 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.1291 CDS gi|507574603|emb|CAVS020000018.1| 89339 90007 2 + 669 FIG00543880: hypothetical protein - none -
fig|6666666.65901.peg.1292 CDS gi|507574603|emb|CAVS020000018.1| 90018 91136 3 + 1119 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65901.peg.1293 CDS gi|507574603|emb|CAVS020000018.1| 91146 92159 3 + 1014 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65901.peg.1294 CDS gi|507574603|emb|CAVS020000018.1| 92170 93471 1 + 1302 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65901.peg.1295 CDS gi|507574603|emb|CAVS020000018.1| 93452 94006 2 + 555 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.65901.peg.1296 CDS gi|507574603|emb|CAVS020000018.1| 94018 95040 1 + 1023 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.65901.peg.1297 CDS gi|507574603|emb|CAVS020000018.1| 95037 95615 3 + 579 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65901.peg.1298 CDS gi|507574603|emb|CAVS020000018.1| 95612 96928 2 + 1317 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.65901.peg.1299 CDS gi|507574603|emb|CAVS020000018.1| 96987 98051 3 + 1065 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4) Acetoin, butanediol metabolism
fig|6666666.65901.peg.1300 CDS gi|507574603|emb|CAVS020000018.1| 98061 98912 3 + 852 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65901.peg.1301 CDS gi|507574603|emb|CAVS020000018.1| 100009 98972 -1 - 1038 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.1302 CDS gi|507574603|emb|CAVS020000018.1| 100149 101141 3 + 993 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65901.peg.1303 CDS gi|507574603|emb|CAVS020000018.1| 101188 101868 1 + 681 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65901.peg.1304 CDS gi|507574603|emb|CAVS020000018.1| 101878 102606 1 + 729 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65901.peg.1305 CDS gi|507574603|emb|CAVS020000018.1| 103044 102607 -3 - 438 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.65901.peg.1306 CDS gi|507574603|emb|CAVS020000018.1| 103542 103060 -3 - 483 Transcriptional regulator in glycyl-tRNA synthetase containing cluster Glycyl-tRNA synthetase containing cluster
fig|6666666.65901.peg.1307 CDS gi|507574603|emb|CAVS020000018.1| 103709 105091 2 + 1383 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65901.peg.1308 CDS gi|507574603|emb|CAVS020000018.1| 105111 105608 3 + 498 FIG00544046: hypothetical protein - none -
fig|6666666.65901.peg.1309 CDS gi|507574603|emb|CAVS020000018.1| 105605 106063 2 + 459 hypothetical protein - none -
fig|6666666.65901.peg.1310 CDS gi|507574603|emb|CAVS020000018.1| 108242 106221 -2 - 2022 FIG00543878: hypothetical protein - none -
fig|6666666.65901.peg.1311 CDS gi|507574603|emb|CAVS020000018.1| 108263 109516 2 + 1254 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65901.peg.1312 CDS gi|507574603|emb|CAVS020000018.1| 110466 109531 -3 - 936 Arsenical pump-driving ATPase (EC 3.6.3.16) Arsenic resistance;
Stress related cluster
fig|6666666.65901.peg.1313 CDS gi|507574603|emb|CAVS020000018.1| 110726 110457 -2 - 270 FIG059250: hypothetical protein Stress related cluster
fig|6666666.65901.peg.1314 CDS gi|507574603|emb|CAVS020000018.1| 112410 110698 -3 - 1713 Carbon starvation protein A Carbon Starvation;
Stress related cluster
fig|6666666.65901.peg.1315 CDS gi|507574603|emb|CAVS020000018.1| 112780 113799 1 + 1020 hypothetical protein - none -
fig|6666666.65901.peg.1316 CDS gi|507574603|emb|CAVS020000018.1| 113909 114298 2 + 390 FIG00547096: hypothetical protein - none -
fig|6666666.65901.peg.1317 CDS gi|507574603|emb|CAVS020000018.1| 114334 114474 1 + 141 hypothetical protein - none -
fig|6666666.65901.peg.1318 CDS gi|507574603|emb|CAVS020000018.1| 114828 114556 -3 - 273 hypothetical protein - none -
fig|6666666.65901.peg.1319 CDS gi|507574603|emb|CAVS020000018.1| 115220 114828 -2 - 393 Ribonuclease - none -
fig|6666666.65901.peg.1320 CDS gi|507574606|emb|CAVS020000017.1| 192 998 3 + 807 putative ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.1321 CDS gi|507574606|emb|CAVS020000017.1| 999 3527 3 + 2529 ABC-type transporter, permease component - none -
fig|6666666.65901.peg.1322 CDS gi|507574606|emb|CAVS020000017.1| 3857 3537 -2 - 321 hypothetical protein - none -
fig|6666666.65901.peg.1323 CDS gi|507574606|emb|CAVS020000017.1| 4233 3883 -3 - 351 hypothetical protein - none -
fig|6666666.65901.peg.1324 CDS gi|507574606|emb|CAVS020000017.1| 4603 4253 -1 - 351 CrcB protein - none -
fig|6666666.65901.peg.1325 CDS gi|507574606|emb|CAVS020000017.1| 4883 4614 -2 - 270 hypothetical protein - none -
fig|6666666.65901.peg.1326 CDS gi|507574606|emb|CAVS020000017.1| 6381 4963 -3 - 1419 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.65901.peg.1327 CDS gi|507574606|emb|CAVS020000017.1| 6491 8116 2 + 1626 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.65901.peg.1328 CDS gi|507574606|emb|CAVS020000017.1| 8135 8617 2 + 483 FIG00544597: hypothetical protein - none -
fig|6666666.65901.peg.1329 CDS gi|507574606|emb|CAVS020000017.1| 8676 9467 3 + 792 hypothetical protein - none -
fig|6666666.65901.peg.1330 CDS gi|507574606|emb|CAVS020000017.1| 10517 9834 -2 - 684 TolA protein Ton and Tol transport systems
fig|6666666.65901.peg.1331 CDS gi|507574606|emb|CAVS020000017.1| 10567 11010 1 + 444 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65901.peg.1332 CDS gi|507574606|emb|CAVS020000017.1| 11003 11773 2 + 771 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.65901.peg.1333 CDS gi|507574606|emb|CAVS020000017.1| 11788 11973 1 + 186 hypothetical protein - none -
fig|6666666.65901.peg.1334 CDS gi|507574606|emb|CAVS020000017.1| 12785 11970 -2 - 816 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.65901.peg.1335 CDS gi|507574606|emb|CAVS020000017.1| 12909 13031 3 + 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65901.peg.1336 CDS gi|507574606|emb|CAVS020000017.1| 13350 13580 3 + 231 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.65901.peg.1337 CDS gi|507574606|emb|CAVS020000017.1| 13760 14281 2 + 522 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65901.peg.1338 CDS gi|507574606|emb|CAVS020000017.1| 14292 16457 3 + 2166 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65901.peg.1339 CDS gi|507574606|emb|CAVS020000017.1| 17199 16486 -3 - 714 Transcriptional regulator, GntR family - none -
fig|6666666.65901.peg.1340 CDS gi|507574606|emb|CAVS020000017.1| 17350 18339 1 + 990 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65901.peg.1341 CDS gi|507574606|emb|CAVS020000017.1| 18607 20364 1 + 1758 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65901.peg.1342 CDS gi|507574606|emb|CAVS020000017.1| 20456 21175 2 + 720 FIG00546117: hypothetical protein - none -
fig|6666666.65901.peg.1343 CDS gi|507574606|emb|CAVS020000017.1| 23129 21165 -2 - 1965 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65901.peg.1344 CDS gi|507574606|emb|CAVS020000017.1| 24479 23133 -2 - 1347 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.65901.peg.1345 CDS gi|507574606|emb|CAVS020000017.1| 24517 24870 1 + 354 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65901.peg.1346 CDS gi|507574606|emb|CAVS020000017.1| 24880 25419 1 + 540 Transcriptional regulatory protein - none -
fig|6666666.65901.peg.1347 CDS gi|507574606|emb|CAVS020000017.1| 25648 26481 1 + 834 FIG00545125: hypothetical protein - none -
fig|6666666.65901.peg.1348 CDS gi|507574606|emb|CAVS020000017.1| 26492 27313 2 + 822 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1349 CDS gi|507574606|emb|CAVS020000017.1| 27341 28114 2 + 774 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.65901.peg.1350 CDS gi|507574606|emb|CAVS020000017.1| 28137 28865 3 + 729 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.65901.peg.1351 CDS gi|507574606|emb|CAVS020000017.1| 28859 29458 2 + 600 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65901.peg.1352 CDS gi|507574606|emb|CAVS020000017.1| 29481 29858 3 + 378 hypothetical protein - none -
fig|6666666.65901.peg.1353 CDS gi|507574606|emb|CAVS020000017.1| 30290 29913 -2 - 378 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65901.peg.1354 CDS gi|507574606|emb|CAVS020000017.1| 30739 30287 -1 - 453 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.65901.peg.1355 CDS gi|507574606|emb|CAVS020000017.1| 31413 30946 -3 - 468 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65901.peg.1356 CDS gi|507574606|emb|CAVS020000017.1| 31511 31786 2 + 276 hypothetical protein - none -
fig|6666666.65901.peg.1357 CDS gi|507574606|emb|CAVS020000017.1| 31900 32544 1 + 645 putative lipoprotein - none -
fig|6666666.65901.peg.1358 CDS gi|507574606|emb|CAVS020000017.1| 33117 32551 -3 - 567 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.65901.peg.1359 CDS gi|507574606|emb|CAVS020000017.1| 33218 34420 2 + 1203 hypothetical protein - none -
fig|6666666.65901.peg.1360 CDS gi|507574606|emb|CAVS020000017.1| 34732 35928 1 + 1197 putative lipoprotein - none -
fig|6666666.65901.peg.1361 CDS gi|507574606|emb|CAVS020000017.1| 36830 36201 -2 - 630 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65901.peg.1362 CDS gi|507574606|emb|CAVS020000017.1| 37637 36831 -2 - 807 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.65901.peg.1363 CDS gi|507574606|emb|CAVS020000017.1| 37962 37648 -3 - 315 Transcriptional regulator - none -
fig|6666666.65901.peg.1364 CDS gi|507574606|emb|CAVS020000017.1| 38384 37959 -2 - 426 hypothetical protein - none -
fig|6666666.65901.peg.1365 CDS gi|507574606|emb|CAVS020000017.1| 39823 38426 -1 - 1398 putative transport protein - none -
fig|6666666.65901.peg.1366 CDS gi|507574606|emb|CAVS020000017.1| 40394 42376 2 + 1983 Copper resistance protein D Copper homeostasis
fig|6666666.65901.peg.1367 CDS gi|507574606|emb|CAVS020000017.1| 42474 43178 3 + 705 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65901.peg.1368 CDS gi|507574606|emb|CAVS020000017.1| 43297 44967 1 + 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.1369 CDS gi|507574606|emb|CAVS020000017.1| 44977 45390 1 + 414 FIG00544139: hypothetical protein - none -
fig|6666666.65901.peg.1370 CDS gi|507574606|emb|CAVS020000017.1| 45391 46017 1 + 627 FIG00545013: hypothetical protein - none -
fig|6666666.65901.peg.1371 CDS gi|507574606|emb|CAVS020000017.1| 46427 46014 -2 - 414 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65901.peg.1372 CDS gi|507574606|emb|CAVS020000017.1| 47367 46411 -3 - 957 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65901.peg.1373 CDS gi|507574606|emb|CAVS020000017.1| 47433 48575 3 + 1143 Cystathionine gamma-lyase (EC 4.4.1.1) Cysteine Biosynthesis;
Glycine and Serine Utilization;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.1374 CDS gi|507574606|emb|CAVS020000017.1| 50955 48562 -3 - 2394 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65901.peg.1375 CDS gi|507574606|emb|CAVS020000017.1| 51055 51606 1 + 552 FIG00544229: hypothetical protein - none -
fig|6666666.65901.peg.1376 CDS gi|507574606|emb|CAVS020000017.1| 51612 52094 3 + 483 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65901.peg.1377 CDS gi|507574606|emb|CAVS020000017.1| 52543 53148 1 + 606 hypothetical protein - none -
fig|6666666.65901.peg.1378 CDS gi|507574606|emb|CAVS020000017.1| 54169 53150 -1 - 1020 Acyl-CoA thioesterase 1 - none -
fig|6666666.65901.peg.1379 CDS gi|507574606|emb|CAVS020000017.1| 54556 54197 -1 - 360 hypothetical protein - none -
fig|6666666.65901.peg.1380 CDS gi|507574606|emb|CAVS020000017.1| 55739 54567 -2 - 1173 Glycosyl transferase, family 2 - none -
fig|6666666.65901.peg.1381 CDS gi|507574606|emb|CAVS020000017.1| 56605 55736 -1 - 870 hypothetical protein - none -
fig|6666666.65901.peg.1382 CDS gi|507574606|emb|CAVS020000017.1| 57426 56602 -3 - 825 FIG00549203: hypothetical protein - none -
fig|6666666.65901.peg.1383 CDS gi|507574606|emb|CAVS020000017.1| 57463 58392 1 + 930 FIG00547591: hypothetical protein - none -
fig|6666666.65901.peg.1384 CDS gi|507574606|emb|CAVS020000017.1| 58389 59504 3 + 1116 FIG00549115: hypothetical protein - none -
fig|6666666.65901.peg.1385 CDS gi|507574609|emb|CAVS020000016.1| 637 1659 1 + 1023 hypothetical protein - none -
fig|6666666.65901.peg.1386 CDS gi|507574609|emb|CAVS020000016.1| 1819 1965 1 + 147 hypothetical protein - none -
fig|6666666.65901.peg.1387 CDS gi|507574609|emb|CAVS020000016.1| 2056 2487 1 + 432 single-stranded DNA-binding protein - none -
fig|6666666.65901.peg.1388 CDS gi|507574609|emb|CAVS020000016.1| 2660 2484 -2 - 177 hypothetical protein - none -
fig|6666666.65901.peg.1389 CDS gi|507574609|emb|CAVS020000016.1| 3109 3654 1 + 546 hypothetical protein - none -
fig|6666666.65901.peg.1390 CDS gi|507574609|emb|CAVS020000016.1| 3651 4010 3 + 360 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.65901.peg.1391 CDS gi|507574609|emb|CAVS020000016.1| 4007 4336 2 + 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.65901.peg.1392 CDS gi|507574609|emb|CAVS020000016.1| 4436 4756 2 + 321 hypothetical protein - none -
fig|6666666.65901.peg.1393 CDS gi|507574609|emb|CAVS020000016.1| 6247 5546 -1 - 702 hypothetical protein - none -
fig|6666666.65901.peg.1394 CDS gi|507574609|emb|CAVS020000016.1| 6798 6499 -3 - 300 hypothetical protein - none -
fig|6666666.65901.peg.1395 CDS gi|507574609|emb|CAVS020000016.1| 8634 7210 -3 - 1425 Mercuric ion reductase (EC 1.16.1.1) Mercuric reductase;
Mercury resistance operon
fig|6666666.65901.peg.1396 CDS gi|507574609|emb|CAVS020000016.1| 8734 9132 1 + 399 Mercuric resistance operon regulatory protein Mercury resistance operon
fig|6666666.65901.peg.1397 CDS gi|507574609|emb|CAVS020000016.1| 9916 10083 1 + 168 Mobile element protein - none -
fig|6666666.65901.peg.1398 CDS gi|507574609|emb|CAVS020000016.1| 10740 10399 -3 - 342 hypothetical protein - none -
fig|6666666.65901.peg.1399 CDS gi|507574609|emb|CAVS020000016.1| 13284 11032 -3 - 2253 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65901.peg.1400 CDS gi|507574609|emb|CAVS020000016.1| 13748 13539 -2 - 210 Copper chaperone Copper homeostasis
fig|6666666.65901.peg.1401 CDS gi|507574609|emb|CAVS020000016.1| 14005 14118 1 + 114 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65901.peg.1402 CDS gi|507574609|emb|CAVS020000016.1| 15913 14348 -1 - 1566 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.65901.peg.1403 CDS gi|507574609|emb|CAVS020000016.1| 17871 16444 -3 - 1428 Multicopper oxidase Copper homeostasis
fig|6666666.65901.peg.1404 CDS gi|507574609|emb|CAVS020000016.1| 18518 17943 -2 - 576 putative exported protein - none -
fig|6666666.65901.peg.1405 CDS gi|507574609|emb|CAVS020000016.1| 18922 19644 1 + 723 two-component system, response regulator - none -
fig|6666666.65901.peg.1406 CDS gi|507574609|emb|CAVS020000016.1| 19641 20768 3 + 1128 two-component system, sensory transduction histidine kinase - none -
fig|6666666.65901.peg.1407 CDS gi|507574609|emb|CAVS020000016.1| 21055 21207 1 + 153 Cation transport ATPase - none -
fig|6666666.65901.peg.1408 CDS gi|507574609|emb|CAVS020000016.1| 21903 21214 -3 - 690 ThiJ/PfpI family protein - none -
fig|6666666.65901.peg.1409 CDS gi|507574609|emb|CAVS020000016.1| 22271 21936 -2 - 336 hypothetical protein - none -
fig|6666666.65901.peg.1410 CDS gi|507574609|emb|CAVS020000016.1| 22928 22494 -2 - 435 hypothetical protein - none -
fig|6666666.65901.peg.1411 CDS gi|507574609|emb|CAVS020000016.1| 24046 22946 -1 - 1101 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65901.peg.1412 CDS gi|507574609|emb|CAVS020000016.1| 24829 24047 -1 - 783 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65901.peg.1413 CDS gi|507574609|emb|CAVS020000016.1| 25026 24832 -3 - 195 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.65901.peg.1414 CDS gi|507574609|emb|CAVS020000016.1| 26081 25023 -2 - 1059 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65901.peg.1415 CDS gi|507574609|emb|CAVS020000016.1| 26911 26210 -1 - 702 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65901.peg.1416 CDS gi|507574609|emb|CAVS020000016.1| 27155 26904 -2 - 252 hypothetical protein - none -
fig|6666666.65901.peg.1417 CDS gi|507574609|emb|CAVS020000016.1| 27832 27356 -1 - 477 unknown - none -
fig|6666666.65901.peg.1418 CDS gi|507574609|emb|CAVS020000016.1| 28762 27857 -1 - 906 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.65901.peg.1419 CDS gi|507574609|emb|CAVS020000016.1| 28873 29040 1 + 168 hypothetical protein - none -
fig|6666666.65901.peg.1420 CDS gi|507574609|emb|CAVS020000016.1| 29070 30812 3 + 1743 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.65901.peg.1421 CDS gi|507574609|emb|CAVS020000016.1| 31279 30848 -1 - 432 ElaA protein cAMP signaling in bacteria
fig|6666666.65901.peg.1422 CDS gi|507574609|emb|CAVS020000016.1| 32507 31254 -2 - 1254 10 TMS hypothetical membrane protein - none -
fig|6666666.65901.peg.1423 CDS gi|507574609|emb|CAVS020000016.1| 32629 33486 1 + 858 hypothetical protein - none -
fig|6666666.65901.peg.1424 CDS gi|507574609|emb|CAVS020000016.1| 34296 33496 -3 - 801 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65901.peg.1425 CDS gi|507574609|emb|CAVS020000016.1| 36103 34304 -1 - 1800 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.65901.peg.1426 CDS gi|507574609|emb|CAVS020000016.1| 36267 37367 3 + 1101 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65901.peg.1427 CDS gi|507574609|emb|CAVS020000016.1| 37553 38245 2 + 693 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65901.peg.1428 CDS gi|507574609|emb|CAVS020000016.1| 38248 39150 1 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65901.peg.1429 CDS gi|507574609|emb|CAVS020000016.1| 39167 39664 2 + 498 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65901.peg.1430 CDS gi|507574609|emb|CAVS020000016.1| 39692 40342 2 + 651 hypothetical protein - none -
fig|6666666.65901.peg.1431 CDS gi|507574609|emb|CAVS020000016.1| 42198 40843 -3 - 1356 Putative membrane protein - none -
fig|6666666.65901.peg.1432 CDS gi|507574609|emb|CAVS020000016.1| 42379 42227 -1 - 153 hypothetical protein - none -
fig|6666666.65901.peg.1433 CDS gi|507574609|emb|CAVS020000016.1| 42612 43277 3 + 666 hypothetical protein - none -
fig|6666666.65901.peg.1434 CDS gi|507574609|emb|CAVS020000016.1| 43383 43940 3 + 558 hypothetical protein - none -
fig|6666666.65901.peg.1435 CDS gi|507574609|emb|CAVS020000016.1| 44106 44699 3 + 594 hypothetical protein - none -
fig|6666666.65901.peg.1436 CDS gi|507574609|emb|CAVS020000016.1| 44871 45902 3 + 1032 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.65901.peg.1437 CDS gi|507574609|emb|CAVS020000016.1| 45913 46887 1 + 975 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.65901.peg.1438 CDS gi|507574609|emb|CAVS020000016.1| 46880 47881 2 + 1002 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.65901.peg.1439 CDS gi|507574609|emb|CAVS020000016.1| 47878 48633 1 + 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.65901.peg.1440 CDS gi|507574612|emb|CAVS020000015.1| 800 4222 2 + 3423 FtsK/SpoIIIE family protein - none -
fig|6666666.65901.peg.1441 CDS gi|507574612|emb|CAVS020000015.1| 4219 5118 1 + 900 hypothetical protein - none -
fig|6666666.65901.peg.1442 CDS gi|507574612|emb|CAVS020000015.1| 5222 5533 2 + 312 FIG00543840: hypothetical protein - none -
fig|6666666.65901.peg.1443 CDS gi|507574612|emb|CAVS020000015.1| 5544 5828 3 + 285 hypothetical protein - none -
fig|6666666.65901.peg.1444 CDS gi|507574612|emb|CAVS020000015.1| 6127 6570 1 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65901.peg.1445 CDS gi|507574612|emb|CAVS020000015.1| 6570 7115 3 + 546 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.65901.peg.1446 CDS gi|507574612|emb|CAVS020000015.1| 8253 7174 -3 - 1080 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.1447 CDS gi|507574612|emb|CAVS020000015.1| 8361 9746 3 + 1386 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65901.peg.1448 CDS gi|507574612|emb|CAVS020000015.1| 9855 10181 3 + 327 hypothetical protein - none -
fig|6666666.65901.peg.1449 CDS gi|507574612|emb|CAVS020000015.1| 10178 11278 2 + 1101 hypothetical protein - none -
fig|6666666.65901.peg.1450 CDS gi|507574612|emb|CAVS020000015.1| 11281 11559 1 + 279 hypothetical protein - none -
fig|6666666.65901.peg.1451 CDS gi|507574612|emb|CAVS020000015.1| 12421 11567 -1 - 855 FIG00545792: hypothetical protein - none -
fig|6666666.65901.peg.1452 CDS gi|507574612|emb|CAVS020000015.1| 12502 13152 1 + 651 hypothetical membrane protein - none -
fig|6666666.65901.peg.1453 CDS gi|507574612|emb|CAVS020000015.1| 13160 14227 2 + 1068 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65901.peg.1454 CDS gi|507574612|emb|CAVS020000015.1| 14228 14695 2 + 468 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.65901.peg.1455 CDS gi|507574612|emb|CAVS020000015.1| 14706 15209 3 + 504 hypothetical protein - none -
fig|6666666.65901.peg.1456 CDS gi|507574612|emb|CAVS020000015.1| 15209 15841 2 + 633 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.65901.peg.1457 CDS gi|507574612|emb|CAVS020000015.1| 15838 16314 1 + 477 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65901.peg.1458 CDS gi|507574612|emb|CAVS020000015.1| 16311 17360 3 + 1050 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65901.peg.1459 CDS gi|507574612|emb|CAVS020000015.1| 17426 17887 2 + 462 FIG00543939: hypothetical protein - none -
fig|6666666.65901.peg.1460 CDS gi|507574612|emb|CAVS020000015.1| 18043 18342 1 + 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65901.peg.1461 CDS gi|507574612|emb|CAVS020000015.1| 18348 19955 3 + 1608 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65901.peg.1462 CDS gi|507574612|emb|CAVS020000015.1| 20448 20137 -3 - 312 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.65901.peg.1463 CDS gi|507574612|emb|CAVS020000015.1| 20725 21300 1 + 576 putative RNA polymerase sigma factor - none -
fig|6666666.65901.peg.1464 CDS gi|507574612|emb|CAVS020000015.1| 21318 22238 3 + 921 hypothetical protein - none -
fig|6666666.65901.peg.1465 CDS gi|507574612|emb|CAVS020000015.1| 22606 22235 -1 - 372 FIG00544572: hypothetical protein - none -
fig|6666666.65901.peg.1466 CDS gi|507574612|emb|CAVS020000015.1| 22742 24265 2 + 1524 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65901.peg.1467 CDS gi|507574612|emb|CAVS020000015.1| 24275 25429 2 + 1155 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65901.peg.1468 CDS gi|507574612|emb|CAVS020000015.1| 25504 26742 1 + 1239 Aerotaxis sensor receptor protein - none -
fig|6666666.65901.peg.1469 CDS gi|507574612|emb|CAVS020000015.1| 26861 28420 2 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65901.peg.1470 CDS gi|507574612|emb|CAVS020000015.1| 29495 28443 -2 - 1053 hypothetical protein - none -
fig|6666666.65901.peg.1471 CDS gi|507574612|emb|CAVS020000015.1| 29656 30735 1 + 1080 FIG00545356: hypothetical protein - none -
fig|6666666.65901.peg.1472 CDS gi|507574612|emb|CAVS020000015.1| 30732 31355 3 + 624 two-component system response regulator - none -
fig|6666666.65901.peg.1473 CDS gi|507574612|emb|CAVS020000015.1| 33223 31352 -1 - 1872 FIG00544299: hypothetical protein - none -
fig|6666666.65901.peg.1474 CDS gi|507574612|emb|CAVS020000015.1| 33351 34982 3 + 1632 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.65901.peg.1475 CDS gi|507574612|emb|CAVS020000015.1| 34983 36002 3 + 1020 putative transport protein - none -
fig|6666666.65901.peg.1476 CDS gi|507574612|emb|CAVS020000015.1| 35999 36874 2 + 876 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65901.peg.1477 CDS gi|507574612|emb|CAVS020000015.1| 36871 38475 1 + 1605 putative ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.1478 CDS gi|507574612|emb|CAVS020000015.1| 38468 39670 2 + 1203 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.65901.peg.1479 CDS gi|507574612|emb|CAVS020000015.1| 40166 39681 -2 - 486 hypothetical protein - none -
fig|6666666.65901.peg.1480 CDS gi|507574612|emb|CAVS020000015.1| 40859 40443 -2 - 417 hypothetical membrane protein - none -
fig|6666666.65901.peg.1481 CDS gi|507574612|emb|CAVS020000015.1| 41080 41757 1 + 678 hypothetical protein - none -
fig|6666666.65901.peg.1482 CDS gi|507574612|emb|CAVS020000015.1| 41754 43307 3 + 1554 DNA polymerase-like protein PA0670 - none -
fig|6666666.65901.peg.1483 CDS gi|507574612|emb|CAVS020000015.1| 43895 43308 -2 - 588 No significant database matches - none -
fig|6666666.65901.peg.1484 CDS gi|507574612|emb|CAVS020000015.1| 44035 44913 1 + 879 FIG00546271: hypothetical protein - none -
fig|6666666.65901.peg.1485 CDS gi|507574612|emb|CAVS020000015.1| 45892 45122 -1 - 771 Cof-like hydrolase - none -
fig|6666666.65901.peg.1486 CDS gi|507574612|emb|CAVS020000015.1| 46605 45904 -3 - 702 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.1487 CDS gi|507574612|emb|CAVS020000015.1| 47630 46602 -2 - 1029 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.1488 CDS gi|507574612|emb|CAVS020000015.1| 48521 47631 -2 - 891 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.1489 CDS gi|507574612|emb|CAVS020000015.1| 49455 48565 -3 - 891 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65901.peg.1490 CDS gi|507574612|emb|CAVS020000015.1| 49622 52786 2 + 3165 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65901.peg.1491 CDS gi|507574612|emb|CAVS020000015.1| 53782 54276 1 + 495 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65901.peg.1492 CDS gi|507574612|emb|CAVS020000015.1| 54273 55676 3 + 1404 transmembrane protein, distant homology with ydbT - none -
fig|6666666.65901.peg.1493 CDS gi|507574612|emb|CAVS020000015.1| 56112 56984 3 + 873 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65901.peg.1494 CDS gi|507574612|emb|CAVS020000015.1| 57033 57383 3 + 351 FIG00545460: hypothetical protein - none -
fig|6666666.65901.peg.1495 CDS gi|507574612|emb|CAVS020000015.1| 57579 58478 3 + 900 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) - none -
fig|6666666.65901.peg.1496 CDS gi|507574612|emb|CAVS020000015.1| 58511 59572 2 + 1062 hypothetical protein - none -
fig|6666666.65901.peg.1497 CDS gi|507574612|emb|CAVS020000015.1| 59582 61240 2 + 1659 Ferric iron ABC transporter, permease protein - none -
fig|6666666.65901.peg.1498 CDS gi|507574612|emb|CAVS020000015.1| 61315 61980 1 + 666 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65901.peg.1499 CDS gi|507574612|emb|CAVS020000015.1| 63113 61977 -2 - 1137 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65901.peg.1500 CDS gi|507574612|emb|CAVS020000015.1| 64448 63114 -2 - 1335 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65901.peg.1501 CDS gi|507574612|emb|CAVS020000015.1| 64636 65514 1 + 879 hypothetical protein - none -
fig|6666666.65901.peg.1502 CDS gi|507574612|emb|CAVS020000015.1| 67939 65762 -1 - 2178 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.65901.peg.1503 CDS gi|507574612|emb|CAVS020000015.1| 68109 68954 3 + 846 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65901.peg.1504 CDS gi|507574612|emb|CAVS020000015.1| 68957 69748 2 + 792 Putative inner membrane protein - none -
fig|6666666.65901.peg.1505 CDS gi|507574612|emb|CAVS020000015.1| 69868 70914 1 + 1047 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65901.peg.1506 CDS gi|507574612|emb|CAVS020000015.1| 70914 71117 3 + 204 hypothetical protein - none -
fig|6666666.65901.peg.1507 CDS gi|507574612|emb|CAVS020000015.1| 71817 71134 -3 - 684 hypothetical protein - none -
fig|6666666.65901.peg.1508 CDS gi|507574612|emb|CAVS020000015.1| 72497 71814 -2 - 684 putative ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.1509 CDS gi|507574612|emb|CAVS020000015.1| 72763 72494 -1 - 270 Transcriptional regulator, GntR family - none -
fig|6666666.65901.peg.1510 CDS gi|507574612|emb|CAVS020000015.1| 74732 72933 -2 - 1800 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65901.peg.1511 CDS gi|507574612|emb|CAVS020000015.1| 74941 74747 -1 - 195 hypothetical protein - none -
fig|6666666.65901.peg.1512 CDS gi|507574612|emb|CAVS020000015.1| 83979 74953 -3 - 9027 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65901.peg.1513 CDS gi|507574612|emb|CAVS020000015.1| 85647 84016 -3 - 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.65901.peg.1514 CDS gi|507574612|emb|CAVS020000015.1| 85772 86179 2 + 408 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65901.peg.1515 CDS gi|507574612|emb|CAVS020000015.1| 86986 86336 -1 - 651 GMP synthase (EC 6.3.5.2) - none -
fig|6666666.65901.peg.1516 CDS gi|507574612|emb|CAVS020000015.1| 87189 87028 -3 - 162 hypothetical protein - none -
fig|6666666.65901.peg.1517 CDS gi|507574612|emb|CAVS020000015.1| 87368 87186 -2 - 183 hypothetical protein - none -
fig|6666666.65901.peg.1518 CDS gi|507574612|emb|CAVS020000015.1| 87683 88693 2 + 1011 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65901.peg.1519 CDS gi|507574612|emb|CAVS020000015.1| 90608 88716 -2 - 1893 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65901.peg.1520 CDS gi|507574612|emb|CAVS020000015.1| 90964 90605 -1 - 360 putative transcriptional regulator (ArsR family) - none -
fig|6666666.65901.peg.1521 CDS gi|507574612|emb|CAVS020000015.1| 91120 92214 1 + 1095 putative membrane protein - none -
fig|6666666.65901.peg.1522 CDS gi|507574612|emb|CAVS020000015.1| 93430 92174 -1 - 1257 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1523 CDS gi|507574612|emb|CAVS020000015.1| 94570 93431 -1 - 1140 FIG00547296: hypothetical protein - none -
fig|6666666.65901.peg.1524 CDS gi|507574612|emb|CAVS020000015.1| 95876 94638 -2 - 1239 FIG026501: hypothetical protein - none -
fig|6666666.65901.peg.1525 CDS gi|507574612|emb|CAVS020000015.1| 96981 95887 -3 - 1095 FIG00544549: hypothetical protein - none -
fig|6666666.65901.peg.1526 CDS gi|507574612|emb|CAVS020000015.1| 97265 96978 -2 - 288 hypothetical protein - none -
fig|6666666.65901.peg.1527 CDS gi|507574612|emb|CAVS020000015.1| 97337 97981 2 + 645 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.65901.peg.1528 CDS gi|507574612|emb|CAVS020000015.1| 98087 98488 2 + 402 predicted transcriptional regulator - none -
fig|6666666.65901.peg.1529 CDS gi|507574612|emb|CAVS020000015.1| 98595 99776 3 + 1182 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65901.peg.1530 CDS gi|507574612|emb|CAVS020000015.1| 99841 101247 1 + 1407 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65901.peg.1531 CDS gi|507574612|emb|CAVS020000015.1| 101413 101526 1 + 114 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle
fig|6666666.65901.peg.1532 CDS gi|507574612|emb|CAVS020000015.1| 101682 105110 3 + 3429 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65901.peg.1533 CDS gi|507574612|emb|CAVS020000015.1| 105868 105356 -1 - 513 Putative acetyltransferase - none -
fig|6666666.65901.peg.1534 CDS gi|507574612|emb|CAVS020000015.1| 105883 106812 1 + 930 hypothetical protein - none -
fig|6666666.65901.peg.1535 CDS gi|507574612|emb|CAVS020000015.1| 108605 106821 -2 - 1785 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65901.peg.1536 CDS gi|507574612|emb|CAVS020000015.1| 109582 108698 -1 - 885 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65901.peg.1537 CDS gi|507574612|emb|CAVS020000015.1| 109878 110939 3 + 1062 FIG00548218: hypothetical protein - none -
fig|6666666.65901.peg.1538 CDS gi|507574612|emb|CAVS020000015.1| 111863 111285 -2 - 579 hypothetical protein - none -
fig|6666666.65901.peg.1539 CDS gi|507574612|emb|CAVS020000015.1| 112433 112035 -2 - 399 FIG00547406: hypothetical protein - none -
fig|6666666.65901.peg.1540 CDS gi|507574612|emb|CAVS020000015.1| 112746 112516 -3 - 231 Transposase - none -
fig|6666666.65901.peg.1541 CDS gi|507574612|emb|CAVS020000015.1| 114941 115084 2 + 144 hypothetical protein - none -
fig|6666666.65901.peg.1542 CDS gi|507574612|emb|CAVS020000015.1| 115096 115620 1 + 525 hypothetical protein - none -
fig|6666666.65901.peg.1543 CDS gi|507574612|emb|CAVS020000015.1| 116207 115617 -2 - 591 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65901.peg.1544 CDS gi|507574612|emb|CAVS020000015.1| 116392 116207 -1 - 186 hypothetical protein - none -
fig|6666666.65901.peg.1545 CDS gi|507574612|emb|CAVS020000015.1| 117926 116412 -2 - 1515 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65901.peg.1546 CDS gi|507574612|emb|CAVS020000015.1| 119268 118021 -3 - 1248 hypothetical protein - none -
fig|6666666.65901.peg.1547 CDS gi|507574612|emb|CAVS020000015.1| 121601 119421 -2 - 2181 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65901.peg.1548 CDS gi|507574612|emb|CAVS020000015.1| 121712 122428 2 + 717 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.1549 CDS gi|507574612|emb|CAVS020000015.1| 122451 122912 3 + 462 hypothetical membrane protein - none -
fig|6666666.65901.peg.1550 CDS gi|507574612|emb|CAVS020000015.1| 123656 122922 -2 - 735 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.65901.peg.1551 CDS gi|507574612|emb|CAVS020000015.1| 123715 124878 1 + 1164 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65901.peg.1552 CDS gi|507574612|emb|CAVS020000015.1| 124883 125386 2 + 504 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65901.peg.1553 CDS gi|507574612|emb|CAVS020000015.1| 125397 125846 3 + 450 hypothetical protein - none -
fig|6666666.65901.peg.1554 CDS gi|507574612|emb|CAVS020000015.1| 125981 126106 2 + 126 hypothetical protein - none -
fig|6666666.65901.peg.1555 CDS gi|507574612|emb|CAVS020000015.1| 126523 126203 -1 - 321 hypothetical protein - none -
fig|6666666.65901.peg.1556 CDS gi|507574612|emb|CAVS020000015.1| 127283 126630 -2 - 654 FIG00545912: hypothetical protein - none -
fig|6666666.65901.peg.1557 CDS gi|507574612|emb|CAVS020000015.1| 127436 127317 -2 - 120 hypothetical protein - none -
fig|6666666.65901.peg.1558 CDS gi|507574612|emb|CAVS020000015.1| 128978 127473 -2 - 1506 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65901.peg.1559 CDS gi|507574612|emb|CAVS020000015.1| 129162 130109 3 + 948 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65901.peg.1560 CDS gi|507574612|emb|CAVS020000015.1| 130146 131264 3 + 1119 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65901.peg.1561 CDS gi|507574612|emb|CAVS020000015.1| 131545 131841 1 + 297 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65901.peg.1562 CDS gi|507574612|emb|CAVS020000015.1| 132262 131846 -1 - 417 FIG00544777: hypothetical protein - none -
fig|6666666.65901.peg.1563 CDS gi|507574612|emb|CAVS020000015.1| 132461 132877 2 + 417 FIG00543823: hypothetical protein - none -
fig|6666666.65901.peg.1564 CDS gi|507574612|emb|CAVS020000015.1| 132938 134308 2 + 1371 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65901.peg.1565 CDS gi|507574612|emb|CAVS020000015.1| 134334 135332 3 + 999 FIG00545059: hypothetical protein - none -
fig|6666666.65901.peg.1566 CDS gi|507574612|emb|CAVS020000015.1| 135343 136524 1 + 1182 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65901.peg.1567 CDS gi|507574612|emb|CAVS020000015.1| 137666 136554 -2 - 1113 hypothetical protein - none -
fig|6666666.65901.peg.1568 CDS gi|507574612|emb|CAVS020000015.1| 137891 138241 2 + 351 FIG00544092: hypothetical protein - none -
fig|6666666.65901.peg.1569 CDS gi|507574612|emb|CAVS020000015.1| 138246 138854 3 + 609 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.65901.peg.1570 CDS gi|507574612|emb|CAVS020000015.1| 138906 139589 3 + 684 DNA-binding response regulator mtrA - none -
fig|6666666.65901.peg.1571 CDS gi|507574612|emb|CAVS020000015.1| 139623 141260 3 + 1638 Putative two component system sensor kinase - none -
fig|6666666.65901.peg.1572 CDS gi|507574612|emb|CAVS020000015.1| 141253 142956 1 + 1704 LpqB - none -
fig|6666666.65901.peg.1573 CDS gi|507574612|emb|CAVS020000015.1| 142967 143593 2 + 627 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.65901.peg.1574 CDS gi|507574612|emb|CAVS020000015.1| 143736 144428 3 + 693 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65901.peg.1575 CDS gi|507574612|emb|CAVS020000015.1| 144631 147198 1 + 2568 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65901.peg.1576 CDS gi|507574612|emb|CAVS020000015.1| 147512 147225 -2 - 288 hypothetical protein - none -
fig|6666666.65901.peg.1577 CDS gi|507574612|emb|CAVS020000015.1| 147815 148228 2 + 414 FIG00996758: hypothetical protein - none -
fig|6666666.65901.peg.1578 CDS gi|507574612|emb|CAVS020000015.1| 148228 148731 1 + 504 FIG00544397: hypothetical protein - none -
fig|6666666.65901.peg.1579 CDS gi|507574612|emb|CAVS020000015.1| 149730 148705 -3 - 1026 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65901.peg.1580 CDS gi|507574612|emb|CAVS020000015.1| 151025 149730 -2 - 1296 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65901.peg.1581 CDS gi|507574612|emb|CAVS020000015.1| 151024 151686 1 + 663 FIG00543821: hypothetical protein - none -
fig|6666666.65901.peg.1582 CDS gi|507574612|emb|CAVS020000015.1| 152115 151702 -3 - 414 Cys-tRNA(Pro) deacylase YbaK - none -
fig|6666666.65901.peg.1583 CDS gi|507574612|emb|CAVS020000015.1| 152212 152850 1 + 639 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65901.peg.1584 CDS gi|507574612|emb|CAVS020000015.1| 152850 153128 3 + 279 hypothetical protein - none -
fig|6666666.65901.peg.1585 CDS gi|507574612|emb|CAVS020000015.1| 153681 154997 3 + 1317 conserved repeat domain - none -
fig|6666666.65901.peg.1586 CDS gi|507574612|emb|CAVS020000015.1| 155523 155260 -3 - 264 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65901.peg.1587 CDS gi|507574612|emb|CAVS020000015.1| 156051 156464 3 + 414 Putative membrane protein - none -
fig|6666666.65901.peg.1588 CDS gi|507574612|emb|CAVS020000015.1| 157709 156498 -2 - 1212 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65901.peg.1589 CDS gi|507574612|emb|CAVS020000015.1| 159031 157706 -1 - 1326 putative ATP-dependent RNA helicase - none -
fig|6666666.65901.peg.1590 CDS gi|507574612|emb|CAVS020000015.1| 159068 159292 2 + 225 putative ATP-binding protein - none -
fig|6666666.65901.peg.1591 CDS gi|507574612|emb|CAVS020000015.1| 159304 160482 1 + 1179 FIG00544386: hypothetical protein - none -
fig|6666666.65901.peg.1592 CDS gi|507574612|emb|CAVS020000015.1| 160613 161224 2 + 612 hypothetical protein - none -
fig|6666666.65901.peg.1593 CDS gi|507574612|emb|CAVS020000015.1| 161221 164364 1 + 3144 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65901.peg.1594 CDS gi|507574612|emb|CAVS020000015.1| 164357 167668 2 + 3312 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65901.peg.1595 CDS gi|507574612|emb|CAVS020000015.1| 167665 168741 1 + 1077 Potassium channel protein Potassium homeostasis
fig|6666666.65901.peg.1596 CDS gi|507574612|emb|CAVS020000015.1| 168746 169522 2 + 777 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65901.peg.1597 CDS gi|507574612|emb|CAVS020000015.1| 169513 171561 1 + 2049 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65901.peg.1598 CDS gi|507574612|emb|CAVS020000015.1| 172418 171588 -2 - 831 hypothetical protein - none -
fig|6666666.65901.peg.1599 CDS gi|507574612|emb|CAVS020000015.1| 172461 172976 3 + 516 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65901.peg.1600 CDS gi|507574612|emb|CAVS020000015.1| 174500 172986 -2 - 1515 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65901.peg.1601 CDS gi|507574612|emb|CAVS020000015.1| 174528 175601 3 + 1074 Lon-like protease with PDZ domain - none -
fig|6666666.65901.peg.1602 CDS gi|507574612|emb|CAVS020000015.1| 176318 175602 -2 - 717 FIG00544133: hypothetical protein - none -
fig|6666666.65901.peg.1603 CDS gi|507574612|emb|CAVS020000015.1| 176847 176329 -3 - 519 FIG129854: hypothetical protein - none -
fig|6666666.65901.peg.1604 CDS gi|507574612|emb|CAVS020000015.1| 176990 179896 2 + 2907 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65901.peg.1605 CDS gi|507574615|emb|CAVS020000014.1| 218 478 2 + 261 hypothetical protein - none -
fig|6666666.65901.peg.1606 CDS gi|507574615|emb|CAVS020000014.1| 1219 1034 -1 - 186 hypothetical protein - none -
fig|6666666.65901.peg.1607 CDS gi|507574615|emb|CAVS020000014.1| 1746 2129 3 + 384 hypothetical protein - none -
fig|6666666.65901.peg.1608 CDS gi|507574615|emb|CAVS020000014.1| 2148 2366 3 + 219 hypothetical protein - none -
fig|6666666.65901.peg.1609 CDS gi|507574615|emb|CAVS020000014.1| 3670 2531 -1 - 1140 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65901.peg.1610 CDS gi|507574615|emb|CAVS020000014.1| 4482 3667 -3 - 816 Probable membrane protein - none -
fig|6666666.65901.peg.1611 CDS gi|507574615|emb|CAVS020000014.1| 4546 5454 1 + 909 hypothetical protein - none -
fig|6666666.65901.peg.1612 CDS gi|507574615|emb|CAVS020000014.1| 5508 6620 3 + 1113 hypothetical protein - none -
fig|6666666.65901.peg.1613 CDS gi|507574615|emb|CAVS020000014.1| 6617 7255 2 + 639 Putative two-component system response regulator - none -
fig|6666666.65901.peg.1614 CDS gi|507574615|emb|CAVS020000014.1| 7322 8023 2 + 702 ABC transport system ATP-binding protein - none -
fig|6666666.65901.peg.1615 CDS gi|507574615|emb|CAVS020000014.1| 8023 9432 1 + 1410 hypothetical membrane protein - none -
fig|6666666.65901.peg.1616 CDS gi|507574615|emb|CAVS020000014.1| 10416 9439 -3 - 978 hypothetical protein - none -
fig|6666666.65901.peg.1617 CDS gi|507574615|emb|CAVS020000014.1| 11442 10495 -3 - 948 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65901.peg.1618 CDS gi|507574615|emb|CAVS020000014.1| 11426 12070 2 + 645 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65901.peg.1619 CDS gi|507574615|emb|CAVS020000014.1| 12476 12030 -2 - 447 hypothetical protein - none -
fig|6666666.65901.peg.1620 CDS gi|507574615|emb|CAVS020000014.1| 12435 14036 3 + 1602 di- and tricarboxylate transporter - none -
fig|6666666.65901.peg.1621 CDS gi|507574615|emb|CAVS020000014.1| 14105 14635 2 + 531 hypothetical protein - none -
fig|6666666.65901.peg.1622 CDS gi|507574615|emb|CAVS020000014.1| 14636 16273 2 + 1638 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65901.peg.1623 CDS gi|507574615|emb|CAVS020000014.1| 16270 16680 1 + 411 FIG00543979: hypothetical protein - none -
fig|6666666.65901.peg.1624 CDS gi|507574615|emb|CAVS020000014.1| 16745 17968 2 + 1224 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65901.peg.1625 CDS gi|507574615|emb|CAVS020000014.1| 19502 18579 -2 - 924 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.65901.peg.1626 CDS gi|507574615|emb|CAVS020000014.1| 20224 19499 -1 - 726 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.65901.peg.1627 CDS gi|507574615|emb|CAVS020000014.1| 21144 20221 -3 - 924 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.65901.peg.1628 CDS gi|507574615|emb|CAVS020000014.1| 21416 21180 -2 - 237 hypothetical protein - none -
fig|6666666.65901.peg.1629 CDS gi|507574615|emb|CAVS020000014.1| 21510 22199 3 + 690 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65901.peg.1630 CDS gi|507574615|emb|CAVS020000014.1| 23416 22196 -1 - 1221 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65901.peg.1631 CDS gi|507574615|emb|CAVS020000014.1| 23512 24537 1 + 1026 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.65901.peg.1632 CDS gi|507574615|emb|CAVS020000014.1| 25364 25684 2 + 321 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65901.peg.1633 CDS gi|507574615|emb|CAVS020000014.1| 25800 26828 3 + 1029 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65901.peg.1634 CDS gi|507574615|emb|CAVS020000014.1| 27000 27428 3 + 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65901.peg.1635 CDS gi|507574615|emb|CAVS020000014.1| 27493 28200 1 + 708 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65901.peg.1636 CDS gi|507574615|emb|CAVS020000014.1| 29349 28270 -3 - 1080 No significant database matches - none -
fig|6666666.65901.peg.1637 CDS gi|507574615|emb|CAVS020000014.1| 30234 30073 -3 - 162 hypothetical protein - none -
fig|6666666.65901.peg.1638 CDS gi|507574615|emb|CAVS020000014.1| 30652 31173 1 + 522 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65901.peg.1639 CDS gi|507574615|emb|CAVS020000014.1| 31226 31615 2 + 390 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65901.peg.1640 CDS gi|507574615|emb|CAVS020000014.1| 31707 32645 3 + 939 hypothetical protein - none -
fig|6666666.65901.peg.1641 CDS gi|507574615|emb|CAVS020000014.1| 32964 36461 3 + 3498 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65901.peg.1642 CDS gi|507574615|emb|CAVS020000014.1| 36546 40544 3 + 3999 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65901.peg.1643 CDS gi|507574615|emb|CAVS020000014.1| 40624 40875 1 + 252 hypothetical protein - none -
fig|6666666.65901.peg.1644 CDS gi|507574615|emb|CAVS020000014.1| 41582 40965 -2 - 618 hypothetical protein - none -
fig|6666666.65901.peg.1645 CDS gi|507574615|emb|CAVS020000014.1| 41814 42185 3 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65901.peg.1646 CDS gi|507574615|emb|CAVS020000014.1| 42189 42656 3 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65901.peg.1647 CDS gi|507574615|emb|CAVS020000014.1| 42859 44979 1 + 2121 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65901.peg.1648 CDS gi|507574615|emb|CAVS020000014.1| 45269 45129 -2 - 141 hypothetical protein - none -
fig|6666666.65901.peg.1649 CDS gi|507574615|emb|CAVS020000014.1| 45270 46505 3 + 1236 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65901.peg.1650 CDS gi|507574615|emb|CAVS020000014.1| 46592 47272 2 + 681 hypothetical protein - none -
fig|6666666.65901.peg.1651 CDS gi|507574615|emb|CAVS020000014.1| 47829 47269 -3 - 561 hypothetical protein - none -
fig|6666666.65901.peg.1652 CDS gi|507574615|emb|CAVS020000014.1| 48506 47826 -2 - 681 hypothetical protein - none -
fig|6666666.65901.peg.1653 CDS gi|507574615|emb|CAVS020000014.1| 49470 48490 -3 - 981 hypothetical protein - none -
fig|6666666.65901.peg.1654 CDS gi|507574615|emb|CAVS020000014.1| 49670 49470 -2 - 201 hypothetical protein - none -
fig|6666666.65901.peg.1655 CDS gi|507574615|emb|CAVS020000014.1| 50015 49713 -2 - 303 hypothetical protein - none -
fig|6666666.65901.peg.1656 CDS gi|507574615|emb|CAVS020000014.1| 50579 50019 -2 - 561 Alkaline shock protein 23 - none -
fig|6666666.65901.peg.1657 CDS gi|507574615|emb|CAVS020000014.1| 51169 51474 1 + 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.65901.peg.1658 CDS gi|507574615|emb|CAVS020000014.1| 51511 52167 1 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65901.peg.1659 CDS gi|507574615|emb|CAVS020000014.1| 52164 52829 3 + 666 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65901.peg.1660 CDS gi|507574615|emb|CAVS020000014.1| 52830 53135 3 + 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65901.peg.1661 CDS gi|507574615|emb|CAVS020000014.1| 53178 54011 3 + 834 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65901.peg.1662 CDS gi|507574615|emb|CAVS020000014.1| 54028 54303 1 + 276 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.65901.peg.1663 CDS gi|507574615|emb|CAVS020000014.1| 54307 54666 1 + 360 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65901.peg.1664 CDS gi|507574615|emb|CAVS020000014.1| 54666 55409 3 + 744 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.65901.peg.1665 CDS gi|507574615|emb|CAVS020000014.1| 55413 55829 3 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65901.peg.1666 CDS gi|507574615|emb|CAVS020000014.1| 55829 56068 2 + 240 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65901.peg.1667 CDS gi|507574615|emb|CAVS020000014.1| 56071 56355 1 + 285 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.65901.peg.1668 CDS gi|507574615|emb|CAVS020000014.1| 56533 58635 1 + 2103 Putative phosphatase - none -
fig|6666666.65901.peg.1669 CDS gi|507574615|emb|CAVS020000014.1| 58739 60604 2 + 1866 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65901.peg.1670 CDS gi|507574615|emb|CAVS020000014.1| 61754 60879 -2 - 876 Fructokinase (EC 2.7.1.4) - none -
fig|6666666.65901.peg.1671 CDS gi|507574615|emb|CAVS020000014.1| 62643 61822 -3 - 822 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.65901.peg.1672 CDS gi|507574615|emb|CAVS020000014.1| 64258 62666 -1 - 1593 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.65901.peg.1673 CDS gi|507574615|emb|CAVS020000014.1| 66050 64251 -2 - 1800 putative ABC transporter - none -
fig|6666666.65901.peg.1674 CDS gi|507574615|emb|CAVS020000014.1| 66825 66124 -3 - 702 Formate-nitrate transporter - none -
fig|6666666.65901.peg.1675 CDS gi|507574615|emb|CAVS020000014.1| 67331 67699 2 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65901.peg.1676 CDS gi|507574615|emb|CAVS020000014.1| 67703 68017 2 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65901.peg.1677 CDS gi|507574615|emb|CAVS020000014.1| 68017 68604 1 + 588 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65901.peg.1678 CDS gi|507574615|emb|CAVS020000014.1| 68935 70452 1 + 1518 Major facilitator superfamily - none -
fig|6666666.65901.peg.1679 CDS gi|507574615|emb|CAVS020000014.1| 71204 70449 -2 - 756 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.65901.peg.1680 CDS gi|507574615|emb|CAVS020000014.1| 71383 72096 1 + 714 Phage protein - none -
fig|6666666.65901.peg.1681 CDS gi|507574615|emb|CAVS020000014.1| 72579 72163 -3 - 417 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65901.peg.1682 CDS gi|507574615|emb|CAVS020000014.1| 73008 72598 -3 - 411 Peptidase M20D, amidohydrolase - none -
fig|6666666.65901.peg.1683 CDS gi|507574615|emb|CAVS020000014.1| 73362 73760 3 + 399 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.65901.peg.1684 CDS gi|507574615|emb|CAVS020000014.1| 73780 74316 1 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65901.peg.1685 CDS gi|507574615|emb|CAVS020000014.1| 74319 74723 3 + 405 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65901.peg.1686 CDS gi|507574615|emb|CAVS020000014.1| 74764 75408 1 + 645 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.65901.peg.1687 CDS gi|507574615|emb|CAVS020000014.1| 75414 75599 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65901.peg.1688 CDS gi|507574615|emb|CAVS020000014.1| 75607 76074 1 + 468 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65901.peg.1689 CDS gi|507574615|emb|CAVS020000014.1| 76501 77829 1 + 1329 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65901.peg.1690 CDS gi|507574615|emb|CAVS020000014.1| 77829 78374 3 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65901.peg.1691 CDS gi|507574615|emb|CAVS020000014.1| 78396 79247 3 + 852 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65901.peg.1692 CDS gi|507574615|emb|CAVS020000014.1| 79299 80102 3 + 804 Putative secreted protein - none -
fig|6666666.65901.peg.1693 CDS gi|507574615|emb|CAVS020000014.1| 80268 80486 3 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65901.peg.1694 CDS gi|507574615|emb|CAVS020000014.1| 80599 81030 1 + 432 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.65901.peg.1695 CDS gi|507574615|emb|CAVS020000014.1| 81034 81435 1 + 402 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.65901.peg.1696 CDS gi|507574615|emb|CAVS020000014.1| 81462 82067 3 + 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.65901.peg.1697 CDS gi|507574615|emb|CAVS020000014.1| 82181 83194 2 + 1014 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65901.peg.1698 CDS gi|507574615|emb|CAVS020000014.1| 83241 83744 3 + 504 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65901.peg.1699 CDS gi|507574615|emb|CAVS020000014.1| 83854 84684 1 + 831 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65901.peg.1700 CDS gi|507574615|emb|CAVS020000014.1| 84718 86850 1 + 2133 FIG00546597: hypothetical protein - none -
fig|6666666.65901.peg.1701 CDS gi|507574615|emb|CAVS020000014.1| 88448 86877 -2 - 1572 Putative integral membrane protein - none -
fig|6666666.65901.peg.1702 CDS gi|507574615|emb|CAVS020000014.1| 89248 88445 -1 - 804 Putative phosphotransferase system protein - none -
fig|6666666.65901.peg.1703 CDS gi|507574615|emb|CAVS020000014.1| 89395 90609 1 + 1215 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65901.peg.1704 CDS gi|507574615|emb|CAVS020000014.1| 91690 90617 -1 - 1074 subtilase family protein - none -
fig|6666666.65901.peg.1705 CDS gi|507574615|emb|CAVS020000014.1| 91814 91692 -2 - 123 hypothetical protein - none -
fig|6666666.65901.peg.1706 CDS gi|507574618|emb|CAVS020000013.1| 297 55 -3 - 243 FIG01267924: hypothetical protein - none -
fig|6666666.65901.peg.1707 CDS gi|507574618|emb|CAVS020000013.1| 362 673 2 + 312 hypothetical protein - none -
fig|6666666.65901.peg.1708 CDS gi|507574618|emb|CAVS020000013.1| 1433 675 -2 - 759 Inositol transport system ATP-binding protein - none -
fig|6666666.65901.peg.1709 CDS gi|507574618|emb|CAVS020000013.1| 2450 1434 -2 - 1017 Probable ABC transport protein, membrane component - none -
fig|6666666.65901.peg.1710 CDS gi|507574618|emb|CAVS020000013.1| 3463 2447 -1 - 1017 Inositol transport system sugar-binding protein - none -
fig|6666666.65901.peg.1711 CDS gi|507574618|emb|CAVS020000013.1| 4453 3491 -1 - 963 Auxin Efflux Carrier - none -
fig|6666666.65901.peg.1712 CDS gi|507574618|emb|CAVS020000013.1| 5260 4469 -1 - 792 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65901.peg.1713 CDS gi|507574618|emb|CAVS020000013.1| 5469 6308 3 + 840 Putative glycosyltransferase - none -
fig|6666666.65901.peg.1714 CDS gi|507574618|emb|CAVS020000013.1| 6319 7695 1 + 1377 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.65901.peg.1715 CDS gi|507574618|emb|CAVS020000013.1| 7688 8374 2 + 687 Potassium uptake protein, integral membrane component, KtrA - none -
fig|6666666.65901.peg.1716 CDS gi|507574618|emb|CAVS020000013.1| 8784 8437 -3 - 348 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.65901.peg.1717 CDS gi|507574618|emb|CAVS020000013.1| 8900 9955 2 + 1056 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65901.peg.1718 CDS gi|507574618|emb|CAVS020000013.1| 9952 10359 1 + 408 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65901.peg.1719 CDS gi|507574618|emb|CAVS020000013.1| 10519 10364 -1 - 156 hypothetical protein - none -
fig|6666666.65901.peg.1720 CDS gi|507574621|emb|CAVS020000012.1| 79 1341 1 + 1263 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65901.peg.1721 CDS gi|507574621|emb|CAVS020000012.1| 2487 1342 -3 - 1146 hypothetical protein - none -
fig|6666666.65901.peg.1722 CDS gi|507574621|emb|CAVS020000012.1| 3784 2672 -1 - 1113 hypothetical protein - none -
fig|6666666.65901.peg.1723 CDS gi|507574621|emb|CAVS020000012.1| 4016 3789 -2 - 228 hypothetical protein - none -
fig|6666666.65901.peg.1724 CDS gi|507574621|emb|CAVS020000012.1| 3984 4730 3 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65901.peg.1725 CDS gi|507574621|emb|CAVS020000012.1| 4743 5924 3 + 1182 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65901.peg.1726 CDS gi|507574621|emb|CAVS020000012.1| 5926 6615 1 + 690 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65901.peg.1727 CDS gi|507574621|emb|CAVS020000012.1| 7546 6632 -1 - 915 FIG00543972: hypothetical protein - none -
fig|6666666.65901.peg.1728 CDS gi|507574621|emb|CAVS020000012.1| 7664 8545 2 + 882 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65901.peg.1729 CDS gi|507574621|emb|CAVS020000012.1| 8545 9429 1 + 885 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.65901.peg.1730 CDS gi|507574621|emb|CAVS020000012.1| 9461 10270 2 + 810 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65901.peg.1731 CDS gi|507574621|emb|CAVS020000012.1| 10449 10640 3 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65901.peg.1732 CDS gi|507574621|emb|CAVS020000012.1| 12111 11104 -3 - 1008 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65901.peg.1733 CDS gi|507574621|emb|CAVS020000012.1| 12196 12432 1 + 237 Glutaredoxin-like domain protein - none -
fig|6666666.65901.peg.1734 CDS gi|507574621|emb|CAVS020000012.1| 12545 13804 2 + 1260 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1735 CDS gi|507574621|emb|CAVS020000012.1| 13805 14686 2 + 882 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1736 CDS gi|507574621|emb|CAVS020000012.1| 14998 16734 1 + 1737 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1737 CDS gi|507574621|emb|CAVS020000012.1| 16774 17784 1 + 1011 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1738 CDS gi|507574621|emb|CAVS020000012.1| 17819 18391 2 + 573 hypothetical membrane protein - none -
fig|6666666.65901.peg.1739 CDS gi|507574621|emb|CAVS020000012.1| 18395 18916 2 + 522 hypothetical protein - none -
fig|6666666.65901.peg.1740 CDS gi|507574621|emb|CAVS020000012.1| 18913 21519 1 + 2607 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65901.peg.1741 CDS gi|507574621|emb|CAVS020000012.1| 21531 22580 3 + 1050 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1742 CDS gi|507574621|emb|CAVS020000012.1| 22580 24013 2 + 1434 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1743 CDS gi|507574621|emb|CAVS020000012.1| 24045 24806 3 + 762 FIG00945547: hypothetical protein - none -
fig|6666666.65901.peg.1744 CDS gi|507574621|emb|CAVS020000012.1| 25844 25008 -2 - 837 putative dehydrogenase - none -
fig|6666666.65901.peg.1745 CDS gi|507574621|emb|CAVS020000012.1| 25865 27190 2 + 1326 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65901.peg.1746 CDS gi|507574621|emb|CAVS020000012.1| 27191 27793 2 + 603 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.65901.peg.1747 CDS gi|507574621|emb|CAVS020000012.1| 27802 28374 1 + 573 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65901.peg.1748 CDS gi|507574621|emb|CAVS020000012.1| 28375 29148 1 + 774 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65901.peg.1749 CDS gi|507574621|emb|CAVS020000012.1| 29149 30798 1 + 1650 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65901.peg.1750 CDS gi|507574621|emb|CAVS020000012.1| 30823 31806 1 + 984 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65901.peg.1751 CDS gi|507574621|emb|CAVS020000012.1| 31806 32825 3 + 1020 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.65901.peg.1752 CDS gi|507574621|emb|CAVS020000012.1| 32822 33079 2 + 258 FIG00545941: hypothetical protein - none -
fig|6666666.65901.peg.1753 CDS gi|507574624|emb|CAVS020000011.1| 2454 103 -3 - 2352 FIG00545284: hypothetical protein - none -
fig|6666666.65901.peg.1754 CDS gi|507574624|emb|CAVS020000011.1| 2630 2833 2 + 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65901.peg.1755 CDS gi|507574624|emb|CAVS020000011.1| 3504 2878 -3 - 627 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65901.peg.1756 CDS gi|507574624|emb|CAVS020000011.1| 3641 6523 2 + 2883 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65901.peg.1757 CDS gi|507574624|emb|CAVS020000011.1| 6678 7715 3 + 1038 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.1758 CDS gi|507574624|emb|CAVS020000011.1| 9295 7772 -1 - 1524 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65901.peg.1759 CDS gi|507574624|emb|CAVS020000011.1| 9333 10532 3 + 1200 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65901.peg.1760 CDS gi|507574624|emb|CAVS020000011.1| 13350 12130 -3 - 1221 Integrase - none -
fig|6666666.65901.peg.1761 CDS gi|507574624|emb|CAVS020000011.1| 13690 13460 -1 - 231 hypothetical protein - none -
fig|6666666.65901.peg.1762 CDS gi|507574624|emb|CAVS020000011.1| 14233 14427 1 + 195 hypothetical protein - none -
fig|6666666.65901.peg.1763 CDS gi|507574624|emb|CAVS020000011.1| 14614 14444 -1 - 171 hypothetical protein - none -
fig|6666666.65901.peg.1764 CDS gi|507574624|emb|CAVS020000011.1| 15037 15270 1 + 234 hypothetical protein - none -
fig|6666666.65901.peg.1765 CDS gi|507574624|emb|CAVS020000011.1| 15295 15585 1 + 291 hypothetical protein - none -
fig|6666666.65901.peg.1766 CDS gi|507574624|emb|CAVS020000011.1| 15637 15837 1 + 201 hypothetical protein - none -
fig|6666666.65901.peg.1767 CDS gi|507574624|emb|CAVS020000011.1| 16229 16786 2 + 558 hypothetical protein - none -
fig|6666666.65901.peg.1768 CDS gi|507574624|emb|CAVS020000011.1| 16889 17119 2 + 231 hypothetical protein - none -
fig|6666666.65901.peg.1769 CDS gi|507574624|emb|CAVS020000011.1| 17116 17295 1 + 180 hypothetical protein - none -
fig|6666666.65901.peg.1770 CDS gi|507574624|emb|CAVS020000011.1| 17282 17437 2 + 156 hypothetical protein - none -
fig|6666666.65901.peg.1771 CDS gi|507574624|emb|CAVS020000011.1| 17434 17655 1 + 222 hypothetical protein - none -
fig|6666666.65901.peg.1772 CDS gi|507574624|emb|CAVS020000011.1| 17652 18641 3 + 990 hypothetical protein - none -
fig|6666666.65901.peg.1773 CDS gi|507574624|emb|CAVS020000011.1| 18644 18928 2 + 285 hypothetical protein - none -
fig|6666666.65901.peg.1774 CDS gi|507574624|emb|CAVS020000011.1| 18925 19173 1 + 249 hypothetical protein - none -
fig|6666666.65901.peg.1775 CDS gi|507574624|emb|CAVS020000011.1| 19170 19466 3 + 297 hypothetical protein - none -
fig|6666666.65901.peg.1776 CDS gi|507574624|emb|CAVS020000011.1| 19463 19744 2 + 282 hypothetical protein - none -
fig|6666666.65901.peg.1777 CDS gi|507574624|emb|CAVS020000011.1| 19892 20629 2 + 738 hypothetical protein - none -
fig|6666666.65901.peg.1778 CDS gi|507574624|emb|CAVS020000011.1| 22407 21169 -3 - 1239 hypothetical protein - none -
fig|6666666.65901.peg.1779 CDS gi|507574624|emb|CAVS020000011.1| 23302 24591 1 + 1290 Phage protein - none -
fig|6666666.65901.peg.1780 CDS gi|507574624|emb|CAVS020000011.1| 24727 25122 1 + 396 hypothetical protein - none -
fig|6666666.65901.peg.1781 CDS gi|507574624|emb|CAVS020000011.1| 25145 26668 2 + 1524 phage terminase, large subunit, putative - none -
fig|6666666.65901.peg.1782 CDS gi|507574624|emb|CAVS020000011.1| 26684 27985 2 + 1302 hypothetical protein - none -
fig|6666666.65901.peg.1783 CDS gi|507574624|emb|CAVS020000011.1| 28011 29318 3 + 1308 hypothetical protein - none -
fig|6666666.65901.peg.1784 CDS gi|507574624|emb|CAVS020000011.1| 29328 29720 3 + 393 hypothetical protein - none -
fig|6666666.65901.peg.1785 CDS gi|507574624|emb|CAVS020000011.1| 29733 30659 3 + 927 hypothetical protein - none -
fig|6666666.65901.peg.1786 CDS gi|507574624|emb|CAVS020000011.1| 30659 31081 2 + 423 hypothetical protein - none -
fig|6666666.65901.peg.1787 CDS gi|507574624|emb|CAVS020000011.1| 31106 31543 2 + 438 hypothetical protein - none -
fig|6666666.65901.peg.1788 CDS gi|507574624|emb|CAVS020000011.1| 31553 31912 2 + 360 hypothetical protein - none -
fig|6666666.65901.peg.1789 CDS gi|507574624|emb|CAVS020000011.1| 31899 32216 3 + 318 hypothetical protein - none -
fig|6666666.65901.peg.1790 CDS gi|507574624|emb|CAVS020000011.1| 32226 32645 3 + 420 hypothetical protein - none -
fig|6666666.65901.peg.1791 CDS gi|507574624|emb|CAVS020000011.1| 32638 33444 1 + 807 hypothetical protein - none -
fig|6666666.65901.peg.1792 CDS gi|507574624|emb|CAVS020000011.1| 33665 34003 2 + 339 hypothetical protein - none -
fig|6666666.65901.peg.1793 CDS gi|507574624|emb|CAVS020000011.1| 34007 34621 2 + 615 hypothetical protein - none -
fig|6666666.65901.peg.1794 CDS gi|507574624|emb|CAVS020000011.1| 34648 40932 1 + 6285 Group B streptococcal surface immunogenic protein - none -
fig|6666666.65901.peg.1795 CDS gi|507574624|emb|CAVS020000011.1| 40932 41681 3 + 750 hypothetical protein - none -
fig|6666666.65901.peg.1796 CDS gi|507574624|emb|CAVS020000011.1| 41750 42721 2 + 972 immunity-specific protein Beta286 - none -
fig|6666666.65901.peg.1797 CDS gi|507574624|emb|CAVS020000011.1| 42722 45592 2 + 2871 hypothetical protein - none -
fig|6666666.65901.peg.1798 CDS gi|507574624|emb|CAVS020000011.1| 45690 46040 3 + 351 hypothetical protein - none -
fig|6666666.65901.peg.1799 CDS gi|507574624|emb|CAVS020000011.1| 46062 46442 3 + 381 hypothetical protein - none -
fig|6666666.65901.peg.1800 CDS gi|507574624|emb|CAVS020000011.1| 46459 46812 1 + 354 hypothetical protein - none -
fig|6666666.65901.peg.1801 CDS gi|507574624|emb|CAVS020000011.1| 46854 47531 3 + 678 hypothetical protein - none -
fig|6666666.65901.peg.1802 CDS gi|507574624|emb|CAVS020000011.1| 47600 49039 2 + 1440 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.65901.peg.1803 CDS gi|507574624|emb|CAVS020000011.1| 49042 49386 1 + 345 hypothetical protein - none -
fig|6666666.65901.peg.1804 CDS gi|507574624|emb|CAVS020000011.1| 49409 49828 2 + 420 Phage protein - none -
fig|6666666.65901.peg.1805 CDS gi|507574624|emb|CAVS020000011.1| 50621 50283 -2 - 339 hypothetical protein - none -
fig|6666666.65901.peg.1806 CDS gi|507574624|emb|CAVS020000011.1| 51248 50820 -2 - 429 hypothetical protein - none -
fig|6666666.65901.peg.1807 CDS gi|507574624|emb|CAVS020000011.1| 53236 51611 -1 - 1626 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.1808 CDS gi|507574624|emb|CAVS020000011.1| 53290 54114 1 + 825 Putative secreted hydrolase - none -
fig|6666666.65901.peg.1809 CDS gi|507574624|emb|CAVS020000011.1| 54125 55219 2 + 1095 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.65901.peg.1810 CDS gi|507574624|emb|CAVS020000011.1| 55220 55840 2 + 621 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.65901.peg.1811 CDS gi|507574624|emb|CAVS020000011.1| 56181 55837 -3 - 345 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65901.peg.1812 CDS gi|507574624|emb|CAVS020000011.1| 56867 56178 -2 - 690 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65901.peg.1813 CDS gi|507574624|emb|CAVS020000011.1| 57679 56882 -1 - 798 FIG00546606: hypothetical protein - none -
fig|6666666.65901.peg.1814 CDS gi|507574624|emb|CAVS020000011.1| 58545 57679 -3 - 867 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65901.peg.1815 CDS gi|507574624|emb|CAVS020000011.1| 59889 58561 -3 - 1329 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.65901.peg.1816 CDS gi|507574624|emb|CAVS020000011.1| 60874 59891 -1 - 984 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65901.peg.1817 CDS gi|507574624|emb|CAVS020000011.1| 62059 60881 -1 - 1179 putative conserved integral membrane protein - none -
fig|6666666.65901.peg.1818 CDS gi|507574624|emb|CAVS020000011.1| 63303 62056 -3 - 1248 aminopeptidase N - none -
fig|6666666.65901.peg.1819 CDS gi|507574624|emb|CAVS020000011.1| 65284 63317 -1 - 1968 Putative prolyl oligopeptidase family protein - none -
fig|6666666.65901.peg.1820 CDS gi|507574624|emb|CAVS020000011.1| 66407 65286 -2 - 1122 FIG00544202: hypothetical protein - none -
fig|6666666.65901.peg.1821 CDS gi|507574624|emb|CAVS020000011.1| 66502 66663 1 + 162 hypothetical protein - none -
fig|6666666.65901.peg.1822 CDS gi|507574624|emb|CAVS020000011.1| 68190 66754 -3 - 1437 hypothetical protein - none -
fig|6666666.65901.peg.1823 CDS gi|507574624|emb|CAVS020000011.1| 68271 69683 3 + 1413 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65901.peg.1824 CDS gi|507574624|emb|CAVS020000011.1| 70555 70091 -1 - 465 hypothetical protein - none -
fig|6666666.65901.peg.1825 CDS gi|507574624|emb|CAVS020000011.1| 70859 70611 -2 - 249 hypothetical protein - none -
fig|6666666.65901.peg.1826 CDS gi|507574624|emb|CAVS020000011.1| 70821 71594 3 + 774 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65901.peg.1827 CDS gi|507574624|emb|CAVS020000011.1| 71616 73694 3 + 2079 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65901.peg.1828 CDS gi|507574624|emb|CAVS020000011.1| 73694 74443 2 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65901.peg.1829 CDS gi|507574624|emb|CAVS020000011.1| 74544 74912 3 + 369 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.65901.peg.1830 CDS gi|507574624|emb|CAVS020000011.1| 74991 76280 3 + 1290 FIG00544632: hypothetical protein - none -
fig|6666666.65901.peg.1831 CDS gi|507574624|emb|CAVS020000011.1| 76295 76825 2 + 531 hypothetical protein - none -
fig|6666666.65901.peg.1832 CDS gi|507574624|emb|CAVS020000011.1| 76831 77145 1 + 315 FIG00544701: hypothetical protein - none -
fig|6666666.65901.peg.1833 CDS gi|507574624|emb|CAVS020000011.1| 77900 77133 -2 - 768 hypothetical protein - none -
fig|6666666.65901.peg.1834 CDS gi|507574624|emb|CAVS020000011.1| 78149 77910 -2 - 240 Methylase of polypeptide chain release factors - none -
fig|6666666.65901.peg.1835 CDS gi|507574624|emb|CAVS020000011.1| 79206 78715 -3 - 492 FIG00546961: hypothetical protein - none -
fig|6666666.65901.peg.1836 CDS gi|507574624|emb|CAVS020000011.1| 79225 80232 1 + 1008 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65901.peg.1837 CDS gi|507574624|emb|CAVS020000011.1| 82272 80536 -3 - 1737 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.1838 CDS gi|507574624|emb|CAVS020000011.1| 84000 82306 -3 - 1695 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65901.peg.1839 CDS gi|507574624|emb|CAVS020000011.1| 84143 85129 2 + 987 FIG00545148: hypothetical protein - none -
fig|6666666.65901.peg.1840 CDS gi|507574627|emb|CAVS020000010.1| 2953 1142 -1 - 1812 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65901.peg.1841 CDS gi|507574627|emb|CAVS020000010.1| 3985 3134 -1 - 852 FIG00544278: hypothetical protein - none -
fig|6666666.65901.peg.1842 CDS gi|507574627|emb|CAVS020000010.1| 4076 5341 2 + 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65901.peg.1843 CDS gi|507574627|emb|CAVS020000010.1| 5354 6379 2 + 1026 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65901.peg.1844 CDS gi|507574627|emb|CAVS020000010.1| 7891 6410 -1 - 1482 FIG00544530: hypothetical protein - none -
fig|6666666.65901.peg.1845 CDS gi|507574627|emb|CAVS020000010.1| 8520 7972 -3 - 549 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65901.peg.1846 CDS gi|507574627|emb|CAVS020000010.1| 8868 8533 -3 - 336 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65901.peg.1847 CDS gi|507574627|emb|CAVS020000010.1| 9137 8871 -2 - 267 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65901.peg.1848 CDS gi|507574627|emb|CAVS020000010.1| 9578 9141 -2 - 438 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65901.peg.1849 CDS gi|507574627|emb|CAVS020000010.1| 11125 9578 -1 - 1548 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65901.peg.1850 CDS gi|507574627|emb|CAVS020000010.1| 11586 11125 -3 - 462 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65901.peg.1851 CDS gi|507574627|emb|CAVS020000010.1| 14499 11590 -3 - 2910 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65901.peg.1852 CDS gi|507574627|emb|CAVS020000010.1| 14591 16063 2 + 1473 FIG00544507: hypothetical protein - none -
fig|6666666.65901.peg.1853 CDS gi|507574627|emb|CAVS020000010.1| 16211 18175 2 + 1965 hypothetical protein - none -
fig|6666666.65901.peg.1854 CDS gi|507574627|emb|CAVS020000010.1| 18458 21688 2 + 3231 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.65901.peg.1855 CDS gi|507574627|emb|CAVS020000010.1| 22522 21776 -1 - 747 hypothetical protein - none -
fig|6666666.65901.peg.1856 CDS gi|507574627|emb|CAVS020000010.1| 23708 23577 -2 - 132 hypothetical protein - none -
fig|6666666.65901.peg.1857 CDS gi|507574627|emb|CAVS020000010.1| 25383 24478 -3 - 906 putative secreted protein - none -
fig|6666666.65901.peg.1858 CDS gi|507574627|emb|CAVS020000010.1| 25399 25848 1 + 450 Transamidase GatB domain protein - none -
fig|6666666.65901.peg.1859 CDS gi|507574627|emb|CAVS020000010.1| 28289 25845 -2 - 2445 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65901.peg.1860 CDS gi|507574627|emb|CAVS020000010.1| 28611 28829 3 + 219 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65901.peg.1861 CDS gi|507574627|emb|CAVS020000010.1| 28845 29000 3 + 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65901.peg.1862 CDS gi|507574627|emb|CAVS020000010.1| 29001 29456 3 + 456 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65901.peg.1863 CDS gi|507574627|emb|CAVS020000010.1| 29530 30309 1 + 780 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65901.peg.1864 CDS gi|507574627|emb|CAVS020000010.1| 31059 30376 -3 - 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65901.peg.1865 CDS gi|507574627|emb|CAVS020000010.1| 31315 32097 1 + 783 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65901.peg.1866 CDS gi|507574627|emb|CAVS020000010.1| 32094 32627 3 + 534 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.65901.peg.1867 CDS gi|507574627|emb|CAVS020000010.1| 32628 33326 3 + 699 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65901.peg.1868 CDS gi|507574627|emb|CAVS020000010.1| 33337 34524 1 + 1188 putative serine protease - none -
fig|6666666.65901.peg.1869 CDS gi|507574627|emb|CAVS020000010.1| 35071 34514 -1 - 558 FIG00544230: hypothetical protein - none -
fig|6666666.65901.peg.1870 CDS gi|507574627|emb|CAVS020000010.1| 35191 36216 1 + 1026 Cytosolic acyl coenzyme A thioester hydrolase, inducible (EC 3.1.2.2) - none -
fig|6666666.65901.peg.1871 CDS gi|507574627|emb|CAVS020000010.1| 37036 36224 -1 - 813 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65901.peg.1872 CDS gi|507574627|emb|CAVS020000010.1| 37216 38232 1 + 1017 hypothetical protein - none -
fig|6666666.65901.peg.1873 CDS gi|507574627|emb|CAVS020000010.1| 38233 39354 1 + 1122 Flp pilus assembly protein, ATPase CpaF - none -
fig|6666666.65901.peg.1874 CDS gi|507574627|emb|CAVS020000010.1| 39351 40094 3 + 744 FIG016317: Probable conserved transmembrane protein - none -
fig|6666666.65901.peg.1875 CDS gi|507574627|emb|CAVS020000010.1| 40091 40639 2 + 549 type II secretion system protein - none -
fig|6666666.65901.peg.1876 CDS gi|507574627|emb|CAVS020000010.1| 40734 40874 3 + 141 hypothetical protein - none -
fig|6666666.65901.peg.1877 CDS gi|507574627|emb|CAVS020000010.1| 40874 41143 2 + 270 Putative secreted protein - none -
fig|6666666.65901.peg.1878 CDS gi|507574630|emb|CAVS020000009.1| 184 963 1 + 780 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65901.peg.1879 CDS gi|507574630|emb|CAVS020000009.1| 1003 1365 1 + 363 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65901.peg.1880 CDS gi|507574630|emb|CAVS020000009.1| 1429 2055 1 + 627 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65901.peg.1881 CDS gi|507574630|emb|CAVS020000009.1| 2157 3242 3 + 1086 FIG00546880: hypothetical protein - none -
fig|6666666.65901.peg.1882 CDS gi|507574630|emb|CAVS020000009.1| 3966 3253 -3 - 714 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65901.peg.1883 CDS gi|507574630|emb|CAVS020000009.1| 5257 3959 -1 - 1299 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65901.peg.1884 CDS gi|507574630|emb|CAVS020000009.1| 6260 5268 -2 - 993 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.65901.peg.1885 CDS gi|507574633|emb|CAVS020000008.1| 1335 2135 3 + 801 hypothetical protein - none -
fig|6666666.65901.peg.1886 CDS gi|507574633|emb|CAVS020000008.1| 2863 2219 -1 - 645 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.1887 CDS gi|507574633|emb|CAVS020000008.1| 2862 3803 3 + 942 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.1888 CDS gi|507574633|emb|CAVS020000008.1| 5530 3806 -1 - 1725 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65901.peg.1889 CDS gi|507574633|emb|CAVS020000008.1| 5916 5620 -3 - 297 hypothetical protein - none -
fig|6666666.65901.peg.1890 CDS gi|507574633|emb|CAVS020000008.1| 6481 6050 -1 - 432 hypothetical protein - none -
fig|6666666.65901.peg.1891 CDS gi|507574633|emb|CAVS020000008.1| 6922 8202 1 + 1281 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65901.peg.1892 CDS gi|507574633|emb|CAVS020000008.1| 8520 8323 -3 - 198 hypothetical protein - none -
fig|6666666.65901.peg.1893 CDS gi|507574636|emb|CAVS020000007.1| 812 24 -2 - 789 O-antigen export system, ATP-binding protein - none -
fig|6666666.65901.peg.1894 CDS gi|507574636|emb|CAVS020000007.1| 1717 830 -1 - 888 O-antigen export system permease protein RfbD - none -
fig|6666666.65901.peg.1895 CDS gi|507574636|emb|CAVS020000007.1| 1823 3034 2 + 1212 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65901.peg.1896 CDS gi|507574636|emb|CAVS020000007.1| 3966 3031 -3 - 936 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65901.peg.1897 CDS gi|507574636|emb|CAVS020000007.1| 4590 4093 -3 - 498 hypothetical protein - none -
fig|6666666.65901.peg.1898 CDS gi|507574636|emb|CAVS020000007.1| 7174 4928 -1 - 2247 Cell surface protein - none -
fig|6666666.65901.peg.1899 CDS gi|507574636|emb|CAVS020000007.1| 7342 8703 1 + 1362 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65901.peg.1900 CDS gi|507574636|emb|CAVS020000007.1| 8955 11225 3 + 2271 hypothetical protein - none -
fig|6666666.65901.peg.1901 CDS gi|507574636|emb|CAVS020000007.1| 12218 11238 -2 - 981 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65901.peg.1902 CDS gi|507574636|emb|CAVS020000007.1| 12293 12775 2 + 483 FIG00544249: hypothetical protein - none -
fig|6666666.65901.peg.1903 CDS gi|507574636|emb|CAVS020000007.1| 12798 13232 3 + 435 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.65901.peg.1904 CDS gi|507574636|emb|CAVS020000007.1| 13309 13536 1 + 228 hypothetical protein - none -
fig|6666666.65901.peg.1905 CDS gi|507574636|emb|CAVS020000007.1| 13772 16135 2 + 2364 putative membrane protein - none -
fig|6666666.65901.peg.1906 CDS gi|507574636|emb|CAVS020000007.1| 16132 17379 1 + 1248 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.1907 CDS gi|507574639|emb|CAVS020000006.1| 30 1892 3 + 1863 hypothetical protein - none -
fig|6666666.65901.peg.1908 CDS gi|507574639|emb|CAVS020000006.1| 2037 2582 3 + 546 hypothetical protein - none -
fig|6666666.65901.peg.1909 CDS gi|507574639|emb|CAVS020000006.1| 2667 4019 3 + 1353 FIG00544776: hypothetical protein - none -
fig|6666666.65901.peg.1910 CDS gi|507574639|emb|CAVS020000006.1| 4021 5205 1 + 1185 FIG00544207: hypothetical protein - none -
fig|6666666.65901.peg.1911 CDS gi|507574639|emb|CAVS020000006.1| 5569 5186 -1 - 384 Multicopper oxidase Copper homeostasis
fig|6666666.65901.peg.1912 CDS gi|507574639|emb|CAVS020000006.1| 5661 6347 3 + 687 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN - none -
fig|6666666.65901.peg.1913 CDS gi|507574639|emb|CAVS020000006.1| 7516 6344 -1 - 1173 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.65901.peg.1914 CDS gi|507574639|emb|CAVS020000006.1| 7574 9193 2 + 1620 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65901.peg.1915 CDS gi|507574639|emb|CAVS020000006.1| 9228 10472 3 + 1245 Putative ATP/GTP binding protein - none -
fig|6666666.65901.peg.1916 CDS gi|507574639|emb|CAVS020000006.1| 10483 11640 1 + 1158 Neopullulanase (EC 3.2.1.135) Maltose and Maltodextrin Utilization
fig|6666666.65901.peg.1917 CDS gi|507574639|emb|CAVS020000006.1| 12179 11619 -2 - 561 hypothetical protein - none -
fig|6666666.65901.peg.1918 CDS gi|507574639|emb|CAVS020000006.1| 12871 12347 -1 - 525 hypothetical protein - none -
fig|6666666.65901.peg.1919 CDS gi|507574639|emb|CAVS020000006.1| 14041 12902 -1 - 1140 FIG016551: Putative peptidase - none -
fig|6666666.65901.peg.1920 CDS gi|507574639|emb|CAVS020000006.1| 14254 14841 1 + 588 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.1921 CDS gi|507574639|emb|CAVS020000006.1| 14851 16209 1 + 1359 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.65901.peg.1922 CDS gi|507574639|emb|CAVS020000006.1| 17442 16213 -3 - 1230 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65901.peg.1923 CDS gi|507574639|emb|CAVS020000006.1| 17579 18511 2 + 933 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65901.peg.1924 CDS gi|507574639|emb|CAVS020000006.1| 19445 18660 -2 - 786 hypothetical protein - none -
fig|6666666.65901.peg.1925 CDS gi|507574639|emb|CAVS020000006.1| 20417 19446 -2 - 972 FIG00544490: hypothetical protein - none -
fig|6666666.65901.peg.1926 CDS gi|507574639|emb|CAVS020000006.1| 20568 22211 3 + 1644 FIG00544558: hypothetical protein - none -
fig|6666666.65901.peg.1927 CDS gi|507574639|emb|CAVS020000006.1| 23175 22186 -3 - 990 FIG00545643: hypothetical protein - none -
fig|6666666.65901.peg.1928 CDS gi|507574639|emb|CAVS020000006.1| 23194 23943 1 + 750 FIG00545045: hypothetical protein - none -
fig|6666666.65901.peg.1929 CDS gi|507574639|emb|CAVS020000006.1| 25377 23926 -3 - 1452 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.65901.peg.1930 CDS gi|507574639|emb|CAVS020000006.1| 25634 26110 2 + 477 hypothetical protein - none -
fig|6666666.65901.peg.1931 CDS gi|507574639|emb|CAVS020000006.1| 28157 26091 -2 - 2067 ATP-dependent helicase HrpB - none -
fig|6666666.65901.peg.1932 CDS gi|507574639|emb|CAVS020000006.1| 28477 28761 1 + 285 2@1-5@1 RNA ligase RNA processing orphans
fig|6666666.65901.peg.1933 CDS gi|507574639|emb|CAVS020000006.1| 30083 28749 -2 - 1335 13E12 repeat family protein - none -
fig|6666666.65901.peg.1934 CDS gi|507574639|emb|CAVS020000006.1| 30487 30630 1 + 144 hypothetical protein - none -
fig|6666666.65901.peg.1935 CDS gi|507574639|emb|CAVS020000006.1| 30676 30942 1 + 267 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.65901.peg.1936 CDS gi|507574639|emb|CAVS020000006.1| 30939 31649 3 + 711 putative oxidoreductase - none -
fig|6666666.65901.peg.1937 CDS gi|507574639|emb|CAVS020000006.1| 32680 31646 -1 - 1035 Capsule biosynthesis protein capA - none -
fig|6666666.65901.peg.1938 CDS gi|507574639|emb|CAVS020000006.1| 32698 32985 1 + 288 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65901.peg.1939 CDS gi|507574639|emb|CAVS020000006.1| 32985 33668 3 + 684 putative hydroxylase - none -
fig|6666666.65901.peg.1940 CDS gi|507574639|emb|CAVS020000006.1| 34312 33665 -1 - 648 FIG00544069: hypothetical protein - none -
fig|6666666.65901.peg.1941 CDS gi|507574639|emb|CAVS020000006.1| 36186 34306 -3 - 1881 putative endopeptidase - none -
fig|6666666.65901.peg.1942 CDS gi|507574639|emb|CAVS020000006.1| 37030 36179 -1 - 852 hypothetical protein - none -
fig|6666666.65901.peg.1943 CDS gi|507574639|emb|CAVS020000006.1| 40232 37035 -2 - 3198 putative arabinosyltransferase - none -
fig|6666666.65901.peg.1944 CDS gi|507574639|emb|CAVS020000006.1| 42063 40234 -3 - 1830 putative membrane protein - none -
fig|6666666.65901.peg.1945 CDS gi|507574639|emb|CAVS020000006.1| 42728 42084 -2 - 645 putative two-component system response regulator - none -
fig|6666666.65901.peg.1946 CDS gi|507574639|emb|CAVS020000006.1| 43402 42725 -1 - 678 putative two-component system sensor kinase - none -
fig|6666666.65901.peg.1947 CDS gi|507574639|emb|CAVS020000006.1| 43495 44160 1 + 666 ABC transporter - none -
fig|6666666.65901.peg.1948 CDS gi|507574639|emb|CAVS020000006.1| 44157 45539 3 + 1383 hypothetical protein - none -
fig|6666666.65901.peg.1949 CDS gi|507574639|emb|CAVS020000006.1| 46300 45536 -1 - 765 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.65901.peg.1950 CDS gi|507574639|emb|CAVS020000006.1| 47716 46313 -1 - 1404 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65901.peg.1951 CDS gi|507574639|emb|CAVS020000006.1| 47968 47732 -1 - 237 FIG00543901: hypothetical protein - none -
fig|6666666.65901.peg.1952 CDS gi|507574639|emb|CAVS020000006.1| 47985 48776 3 + 792 hypothetical protein - none -
fig|6666666.65901.peg.1953 CDS gi|507574639|emb|CAVS020000006.1| 48788 49216 2 + 429 hypothetical protein - none -
fig|6666666.65901.peg.1954 CDS gi|507574639|emb|CAVS020000006.1| 50105 49203 -2 - 903 Putative glycosyl transferase - none -
fig|6666666.65901.peg.1955 CDS gi|507574645|emb|CAVS020000004.1| 248 1348 2 + 1101 hypothetical protein - none -
fig|6666666.65901.peg.1956 CDS gi|507574645|emb|CAVS020000004.1| 1576 2211 1 + 636 hypothetical protein - none -
fig|6666666.65901.peg.1957 CDS gi|507574645|emb|CAVS020000004.1| 2870 2607 -2 - 264 hypothetical protein - none -
fig|6666666.65901.peg.1958 CDS gi|507574645|emb|CAVS020000004.1| 3692 4330 2 + 639 L-lysine permease - none -
fig|6666666.65901.peg.1959 CDS gi|507574645|emb|CAVS020000004.1| 5272 4628 -1 - 645 hypothetical protein - none -
fig|6666666.65901.peg.1960 CDS gi|507574645|emb|CAVS020000004.1| 6127 5903 -1 - 225 hypothetical protein - none -
fig|6666666.65901.peg.1961 CDS gi|507574645|emb|CAVS020000004.1| 6575 6351 -2 - 225 hypothetical protein - none -
fig|6666666.65901.peg.1962 CDS gi|507574645|emb|CAVS020000004.1| 6929 7867 2 + 939 hypothetical protein - none -
fig|6666666.65901.peg.1963 CDS gi|507574645|emb|CAVS020000004.1| 11272 8936 -1 - 2337 putative DNA helicase - none -
fig|6666666.65901.peg.1964 CDS gi|507574645|emb|CAVS020000004.1| 17602 11279 -1 - 6324 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.65901.peg.1965 CDS gi|507574645|emb|CAVS020000004.1| 18860 18982 2 + 123 hypothetical protein - none -
fig|6666666.65901.peg.1966 CDS gi|507574645|emb|CAVS020000004.1| 25942 21374 -1 - 4569 Type II restriction enzyme, methylase subunits - none -
fig|6666666.65901.peg.1967 CDS gi|507574645|emb|CAVS020000004.1| 28820 25947 -2 - 2874 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.65901.peg.1968 CDS gi|507574645|emb|CAVS020000004.1| 29545 28937 -1 - 609 hypothetical protein - none -
fig|6666666.65901.peg.1969 CDS gi|507574645|emb|CAVS020000004.1| 32077 30911 -1 - 1167 hypothetical protein - none -
fig|6666666.65901.peg.1970 CDS gi|507574645|emb|CAVS020000004.1| 35351 32064 -2 - 3288 FIG007317: hypothetical protein - none -
fig|6666666.65901.peg.1971 CDS gi|507574645|emb|CAVS020000004.1| 35947 35348 -1 - 600 FIG039767: hypothetical protein - none -
fig|6666666.65901.peg.1972 CDS gi|507574645|emb|CAVS020000004.1| 37410 35944 -3 - 1467 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.65901.peg.1973 CDS gi|507574645|emb|CAVS020000004.1| 39036 37603 -3 - 1434 hypothetical protein - none -
fig|6666666.65901.peg.1974 CDS gi|507574645|emb|CAVS020000004.1| 39146 39601 2 + 456 hypothetical protein - none -
fig|6666666.65901.peg.1975 CDS gi|507574645|emb|CAVS020000004.1| 39782 40249 2 + 468 hypothetical protein - none -
fig|6666666.65901.peg.1976 CDS gi|507574645|emb|CAVS020000004.1| 41021 40314 -2 - 708 hypothetical protein - none -
fig|6666666.65901.peg.1977 CDS gi|507574645|emb|CAVS020000004.1| 42376 41144 -1 - 1233 putative transmembrane symporter - none -
fig|6666666.65901.peg.1978 CDS gi|507574645|emb|CAVS020000004.1| 42464 42913 2 + 450 Putative integral membrane protein - none -
fig|6666666.65901.peg.1979 CDS gi|507574645|emb|CAVS020000004.1| 42920 43129 2 + 210 hypothetical protein - none -
fig|6666666.65901.peg.1980 CDS gi|507574645|emb|CAVS020000004.1| 43314 44873 3 + 1560 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65901.peg.1981 CDS gi|507574645|emb|CAVS020000004.1| 44866 46170 1 + 1305 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65901.peg.1982 CDS gi|507574645|emb|CAVS020000004.1| 46181 47377 2 + 1197 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65901.peg.1983 CDS gi|507574645|emb|CAVS020000004.1| 47679 48200 3 + 522 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65901.peg.1984 CDS gi|507574645|emb|CAVS020000004.1| 48215 48562 2 + 348 Putative iron-sulphur protein - none -
fig|6666666.65901.peg.1985 CDS gi|507574645|emb|CAVS020000004.1| 48563 49504 2 + 942 Sodium - Bile acid symporter - none -
fig|6666666.65901.peg.1986 CDS gi|507574645|emb|CAVS020000004.1| 49514 49816 2 + 303 No significant database matches - none -
fig|6666666.65901.peg.1987 CDS gi|507574645|emb|CAVS020000004.1| 50524 51786 1 + 1263 hypothetical protein; putative His-Me finger endonuclease domain - none -
fig|6666666.65901.peg.1988 CDS gi|507574645|emb|CAVS020000004.1| 52218 51790 -3 - 429 hypothetical protein - none -
fig|6666666.65901.peg.1989 CDS gi|507574645|emb|CAVS020000004.1| 52678 52415 -1 - 264 hypothetical protein - none -
fig|6666666.65901.peg.1990 CDS gi|507574645|emb|CAVS020000004.1| 53421 52816 -3 - 606 Putative transcriptional regulator - none -
fig|6666666.65901.peg.1991 CDS gi|507574645|emb|CAVS020000004.1| 54904 53414 -1 - 1491 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65901.peg.1992 CDS gi|507574645|emb|CAVS020000004.1| 55232 55699 2 + 468 MutT/nudix family protein - none -
fig|6666666.65901.peg.1993 CDS gi|507574645|emb|CAVS020000004.1| 55696 58116 1 + 2421 probable secreted protein. - none -
fig|6666666.65901.peg.1994 CDS gi|507574645|emb|CAVS020000004.1| 58113 61424 3 + 3312 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65901.peg.1995 CDS gi|507574645|emb|CAVS020000004.1| 61498 62061 1 + 564 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65901.peg.1996 CDS gi|507574645|emb|CAVS020000004.1| 62073 63074 3 + 1002 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65901.peg.1997 CDS gi|507574645|emb|CAVS020000004.1| 63085 63408 1 + 324 Thioredoxin - none -
fig|6666666.65901.peg.1998 CDS gi|507574645|emb|CAVS020000004.1| 63452 64630 2 + 1179 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.65901.peg.1999 CDS gi|507574645|emb|CAVS020000004.1| 65670 64627 -3 - 1044 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65901.peg.2000 CDS gi|507574645|emb|CAVS020000004.1| 66615 65674 -3 - 942 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65901.peg.2001 CDS gi|507574645|emb|CAVS020000004.1| 67194 66616 -3 - 579 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.65901.peg.2002 CDS gi|507574645|emb|CAVS020000004.1| 68293 67328 -1 - 966 Inner membrane protein translocase component YidC, long form RNA modification cluster
fig|6666666.65901.peg.2003 CDS gi|507574645|emb|CAVS020000004.1| 68590 68303 -1 - 288 Protein YidD RNA modification cluster
fig|6666666.65901.peg.2004 CDS gi|507574645|emb|CAVS020000004.1| 68850 68590 -3 - 261 Ribonuclease P protein component (EC 3.1.26.5) RNA modification cluster;
tRNA processing
fig|6666666.65901.peg.2005 CDS gi|507574645|emb|CAVS020000004.1| 69097 68960 -1 - 138 LSU ribosomal protein L34p RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.65901.peg.2006 CDS gi|507574645|emb|CAVS020000004.1| 69843 71420 3 + 1578 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65901.peg.2007 CDS gi|507574645|emb|CAVS020000004.1| 71507 71650 2 + 144 hypothetical protein - none -
fig|6666666.65901.peg.2008 CDS gi|507574645|emb|CAVS020000004.1| 72083 73267 2 + 1185 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65901.peg.2009 CDS gi|507574645|emb|CAVS020000004.1| 73271 74452 2 + 1182 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65901.peg.2010 CDS gi|507574645|emb|CAVS020000004.1| 74436 75044 3 + 609 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65901.peg.2011 CDS gi|507574645|emb|CAVS020000004.1| 75190 77289 1 + 2100 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65901.peg.2012 CDS gi|507574645|emb|CAVS020000004.1| 77831 77391 -2 - 441 hypothetical protein - none -
fig|6666666.65901.peg.2013 CDS gi|507574645|emb|CAVS020000004.1| 78399 77974 -3 - 426 hypothetical protein - none -
fig|6666666.65901.peg.2014 CDS gi|507574645|emb|CAVS020000004.1| 78460 78669 1 + 210 hypothetical protein - none -
fig|6666666.65901.peg.2015 CDS gi|507574645|emb|CAVS020000004.1| 78997 78725 -1 - 273 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.65901.peg.2016 CDS gi|507574645|emb|CAVS020000004.1| 79206 78994 -3 - 213 Prevent host death protein, Phd antitoxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.65901.peg.2017 CDS gi|507574645|emb|CAVS020000004.1| 79268 81817 2 + 2550 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65901.peg.2018 CDS gi|507574645|emb|CAVS020000004.1| 81821 82165 2 + 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65901.peg.2019 CDS gi|507574645|emb|CAVS020000004.1| 83364 82264 -3 - 1101 conserved repeat domain - none -
fig|6666666.65901.peg.2020 CDS gi|507574645|emb|CAVS020000004.1| 84052 85797 1 + 1746 ATP-dependent DNA helicase - none -
fig|6666666.65901.peg.2021 CDS gi|507574645|emb|CAVS020000004.1| 85935 86501 3 + 567 hypothetical protein - none -
fig|6666666.65901.peg.2022 CDS gi|507574645|emb|CAVS020000004.1| 86532 87371 3 + 840 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.65901.peg.2023 CDS gi|507574645|emb|CAVS020000004.1| 87368 88897 2 + 1530 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.65901.peg.2024 CDS gi|507574645|emb|CAVS020000004.1| 89421 92978 3 + 3558 hypothetical protein - none -
fig|6666666.65901.peg.2025 CDS gi|507574645|emb|CAVS020000004.1| 93640 93203 -1 - 438 hypothetical protein - none -
fig|6666666.65901.peg.2026 CDS gi|507574645|emb|CAVS020000004.1| 95789 93696 -2 - 2094 Putative membrane protein - none -
fig|6666666.65901.peg.2027 CDS gi|507574645|emb|CAVS020000004.1| 96370 95786 -1 - 585 No significant database matches - none -
fig|6666666.65901.peg.2028 CDS gi|507574645|emb|CAVS020000004.1| 96497 97051 2 + 555 Transcriptional regulator, TetR family - none -
fig|6666666.65901.peg.2029 CDS gi|507574645|emb|CAVS020000004.1| 97810 97052 -1 - 759 hypothetical protein - none -
fig|6666666.65901.peg.2030 CDS gi|507574645|emb|CAVS020000004.1| 98125 99057 1 + 933 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65901.peg.2031 CDS gi|507574645|emb|CAVS020000004.1| 99071 101329 2 + 2259 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.65901.peg.2032 CDS gi|507574645|emb|CAVS020000004.1| 101730 102521 3 + 792 hypothetical protein - none -
fig|6666666.65901.peg.2033 CDS gi|507574645|emb|CAVS020000004.1| 102676 103197 1 + 522 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65901.peg.2034 CDS gi|507574645|emb|CAVS020000004.1| 103264 103932 1 + 669 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.65901.peg.2035 CDS gi|507574645|emb|CAVS020000004.1| 104404 104204 -1 - 201 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65901.peg.2036 CDS gi|507574645|emb|CAVS020000004.1| 106609 104531 -1 - 2079 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65901.peg.2037 CDS gi|507574645|emb|CAVS020000004.1| 108181 106610 -1 - 1572 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65901.peg.2038 CDS gi|507574645|emb|CAVS020000004.1| 109636 108182 -1 - 1455 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65901.peg.2039 CDS gi|507574645|emb|CAVS020000004.1| 110985 109633 -3 - 1353 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65901.peg.2040 CDS gi|507574645|emb|CAVS020000004.1| 112340 110982 -2 - 1359 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65901.peg.2041 CDS gi|507574645|emb|CAVS020000004.1| 112786 112337 -1 - 450 FIG00818182: hypothetical protein - none -
fig|6666666.65901.peg.2042 CDS gi|507574645|emb|CAVS020000004.1| 113682 112798 -3 - 885 FIG00543872: hypothetical protein - none -
fig|6666666.65901.peg.2043 CDS gi|507574645|emb|CAVS020000004.1| 117459 115939 -3 - 1521 hypothetical protein - none -
fig|6666666.65901.peg.2044 CDS gi|507574645|emb|CAVS020000004.1| 119631 117694 -3 - 1938 hypothetical protein - none -
fig|6666666.65901.peg.2045 CDS gi|507574648|emb|CAVS020000003.1| 2962 134 -1 - 2829 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65901.peg.2046 CDS gi|507574648|emb|CAVS020000003.1| 3220 3636 1 + 417 hypothetical protein - none -
fig|6666666.65901.peg.2047 CDS gi|507574648|emb|CAVS020000003.1| 4959 3640 -3 - 1320 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65901.peg.2048 CDS gi|507574648|emb|CAVS020000003.1| 5173 5036 -1 - 138 hypothetical protein - none -
fig|6666666.65901.peg.2049 CDS gi|507574648|emb|CAVS020000003.1| 7523 5238 -2 - 2286 hypothetical protein - none -
fig|6666666.65901.peg.2050 CDS gi|507574651|emb|CAVS020000002.1| 736 1668 1 + 933 hypothetical protein - none -
fig|6666666.65901.peg.2051 CDS gi|507574651|emb|CAVS020000002.1| 1678 2841 1 + 1164 Arabinose efflux permease - none -
fig|6666666.65901.peg.2052 CDS gi|507574651|emb|CAVS020000002.1| 3909 3268 -3 - 642 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.65901.peg.2053 CDS gi|507574651|emb|CAVS020000002.1| 4913 3909 -2 - 1005 FIG00545752: hypothetical protein - none -
fig|6666666.65901.peg.2054 CDS gi|507574651|emb|CAVS020000002.1| 4978 6117 1 + 1140 two-component system histidine kinase ChrS - none -
fig|6666666.65901.peg.2055 CDS gi|507574651|emb|CAVS020000002.1| 6114 6716 3 + 603 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65901.peg.2056 CDS gi|507574651|emb|CAVS020000002.1| 6727 7269 1 + 543 Pirin - none -
fig|6666666.65901.peg.2057 CDS gi|507574651|emb|CAVS020000002.1| 7351 8775 1 + 1425 Putative transport protein - none -
fig|6666666.65901.peg.2058 CDS gi|507574651|emb|CAVS020000002.1| 8793 10133 3 + 1341 hypothetical protein - none -
fig|6666666.65901.peg.2059 CDS gi|507574651|emb|CAVS020000002.1| 10527 10198 -3 - 330 hypothetical protein - none -
fig|6666666.65901.peg.2060 CDS gi|507574651|emb|CAVS020000002.1| 10889 10524 -2 - 366 Inner membrane protein - none -
fig|6666666.65901.peg.2061 CDS gi|507574651|emb|CAVS020000002.1| 11392 10886 -1 - 507 Conserved integral membrane protein - none -
fig|6666666.65901.peg.2062 CDS gi|507574651|emb|CAVS020000002.1| 11416 12366 1 + 951 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65901.peg.2063 CDS gi|507574651|emb|CAVS020000002.1| 13354 12356 -1 - 999 hypothetical protein - none -
fig|6666666.65901.peg.2064 CDS gi|507574651|emb|CAVS020000002.1| 13731 13570 -3 - 162 hypothetical protein - none -
fig|6666666.65901.peg.2065 CDS gi|507574651|emb|CAVS020000002.1| 14652 13774 -3 - 879 Transporter - none -
fig|6666666.65901.peg.2066 CDS gi|507574651|emb|CAVS020000002.1| 15452 15282 -2 - 171 hypothetical protein - none -
fig|6666666.65901.peg.2067 CDS gi|507574654|emb|CAVS020000001.1| 1301 303 -2 - 999 hypothetical protein - none -
fig|6666666.65901.peg.2068 CDS gi|507574654|emb|CAVS020000001.1| 2059 1301 -1 - 759 ABC transporter ATP-binding protein - none -
fig|6666666.65901.peg.2069 CDS gi|507574654|emb|CAVS020000001.1| 2430 2056 -3 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.65901.peg.2070 CDS gi|507574654|emb|CAVS020000001.1| 2614 4011 1 + 1398 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65901.peg.2071 CDS gi|507574654|emb|CAVS020000001.1| 5227 4271 -1 - 957 FIG00544174: hypothetical protein - none -
fig|6666666.65901.peg.2072 CDS gi|507574654|emb|CAVS020000001.1| 5687 5316 -2 - 372 Thioredoxin - none -
fig|6666666.65901.peg.2073 CDS gi|507574654|emb|CAVS020000001.1| 5809 6009 1 + 201 hypothetical protein - none -
fig|6666666.65901.peg.2074 CDS gi|507574654|emb|CAVS020000001.1| 6022 6222 1 + 201 Copper chaperone Copper homeostasis
fig|6666666.65901.peg.2075 CDS gi|507574654|emb|CAVS020000001.1| 6295 8514 1 + 2220 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65901.peg.2076 CDS gi|507574654|emb|CAVS020000001.1| 8554 9867 1 + 1314 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.65901.peg.2077 CDS gi|507574654|emb|CAVS020000001.1| 10074 9886 -3 - 189 hypothetical protein - none -
fig|6666666.65901.peg.2078 CDS gi|507574654|emb|CAVS020000001.1| 10227 10832 3 + 606 hypothetical protein - none -
fig|6666666.65901.peg.2079 CDS gi|507574654|emb|CAVS020000001.1| 12346 10829 -1 - 1518 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65901.peg.2080 CDS gi|507574654|emb|CAVS020000001.1| 12877 13149 1 + 273 hypothetical protein - none -
fig|6666666.65901.peg.2081 CDS gi|507574654|emb|CAVS020000001.1| 15192 13120 -3 - 2073 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.65901.peg.2082 CDS gi|507574654|emb|CAVS020000001.1| 16209 15535 -3 - 675 putative ABC transporter - none -
fig|6666666.65901.peg.2083 CDS gi|507574654|emb|CAVS020000001.1| 16895 16209 -2 - 687 putative ABC transporter - none -
fig|6666666.65901.peg.2084 CDS gi|507574654|emb|CAVS020000001.1| 17419 16898 -1 - 522 hypothetical protein - none -
fig|6666666.65901.peg.2085 CDS gi|507574654|emb|CAVS020000001.1| 18244 17792 -1 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65901.peg.2086 CDS gi|507574654|emb|CAVS020000001.1| 18934 18293 -1 - 642 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65901.peg.2087 CDS gi|507574654|emb|CAVS020000001.1| 19273 18986 -1 - 288 SSU ribosomal protein S6p - none -
fig|6666666.65901.peg.2088 CDS gi|507574654|emb|CAVS020000001.1| 19913 19725 -2 - 189 hypothetical protein - none -
fig|6666666.65901.peg.2089 CDS gi|507574654|emb|CAVS020000001.1| 21078 19924 -3 - 1155 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65901.peg.2090 CDS gi|507574654|emb|CAVS020000001.1| 23729 21087 -2 - 2643 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65901.peg.2091 CDS gi|507574654|emb|CAVS020000001.1| 24206 23832 -2 - 375 hypothetical protein - none -
fig|6666666.65901.peg.2092 CDS gi|507574654|emb|CAVS020000001.1| 24265 24726 1 + 462 Transcriptional regulator, MarR family - none -
fig|6666666.65901.peg.2093 CDS gi|507574654|emb|CAVS020000001.1| 24892 25770 1 + 879 Universal stress protein family - none -
fig|6666666.65901.peg.2094 CDS gi|507574654|emb|CAVS020000001.1| 25781 26239 2 + 459 hypothetical membrane protein - none -
fig|6666666.65901.peg.2095 CDS gi|507574654|emb|CAVS020000001.1| 27119 26211 -2 - 909 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65901.peg.2096 CDS gi|507574654|emb|CAVS020000001.1| 27468 27133 -3 - 336 Excisionase - none -
fig|6666666.65901.peg.2097 CDS gi|507574654|emb|CAVS020000001.1| 29016 27523 -3 - 1494 ATP-dependent Zn protease - none -
fig|6666666.65901.peg.2098 CDS gi|507574654|emb|CAVS020000001.1| 29042 29848 2 + 807 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65901.peg.2099 CDS gi|507574654|emb|CAVS020000001.1| 29849 31141 2 + 1293 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65901.peg.2100 CDS gi|507574654|emb|CAVS020000001.1| 31117 31446 1 + 330 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65901.peg.2101 CDS gi|507574654|emb|CAVS020000001.1| 31439 32395 2 + 957 Putative monooxygenase - none -
fig|6666666.65901.rna.1 RNA gi|507574516|emb|CAVS020000047.1| 95 670 2 + 576 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65901.rna.2 RNA gi|507574525|emb|CAVS020000044.1| 71 192 2 + 122 5S RNA - none -
fig|6666666.65901.rna.3 RNA gi|507574534|emb|CAVS020000041.1| 1 2416 1 + 2416 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65901.rna.4 RNA gi|507574537|emb|CAVS020000040.1| 257 1765 2 + 1509 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65901.rna.5 RNA gi|507574540|emb|CAVS020000039.1| 62867 62937 2 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.65901.rna.6 RNA gi|507574543|emb|CAVS020000038.1| 14391 14319 -3 - 73 tRNA-Thr-TGT - none -
fig|6666666.65901.rna.7 RNA gi|507574546|emb|CAVS020000037.1| 153 81 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.65901.rna.8 RNA gi|507574549|emb|CAVS020000036.1| 4660 4588 -1 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.65901.rna.9 RNA gi|507574549|emb|CAVS020000036.1| 4762 4689 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.65901.rna.10 RNA gi|507574549|emb|CAVS020000036.1| 7341 7268 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.65901.rna.11 RNA gi|507574549|emb|CAVS020000036.1| 7415 7343 -2 - 73 tRNA-Glu-TTC - none -
fig|6666666.65901.rna.12 RNA gi|507574552|emb|CAVS020000035.1| 16929 16856 -3 - 74 tRNA-Leu-CAA tRNAs
fig|6666666.65901.rna.13 RNA gi|507574555|emb|CAVS020000034.1| 6437 6509 2 + 73 tRNA-Glu-CTC - none -
fig|6666666.65901.rna.14 RNA gi|507574558|emb|CAVS020000033.1| 114869 114796 -2 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.65901.rna.15 RNA gi|507574558|emb|CAVS020000033.1| 200930 201001 2 + 72 tRNA-Gln-CTG - none -
fig|6666666.65901.rna.16 RNA gi|507574558|emb|CAVS020000033.1| 201031 201103 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.65901.rna.17 RNA gi|507574561|emb|CAVS020000032.1| 57699 57628 -3 - 72 tRNA-Gln-TTG - none -
fig|6666666.65901.rna.18 RNA gi|507574561|emb|CAVS020000032.1| 65467 65540 1 + 74 tRNA-Leu-TAA - none -
fig|6666666.65901.rna.19 RNA gi|507574567|emb|CAVS020000030.1| 39711 39783 3 + 73 tRNA-Ala-CGC tRNAs
fig|6666666.65901.rna.20 RNA gi|507574570|emb|CAVS020000029.1| 4 125 1 + 122 5S RNA - none -
fig|6666666.65901.rna.21 RNA gi|507574570|emb|CAVS020000029.1| 26613 26685 3 + 73 tRNA-Arg-CCT - none -
fig|6666666.65901.rna.22 RNA gi|507574573|emb|CAVS020000028.1| 2935 3008 1 + 74 tRNA-Pro-GGG tRNAs
fig|6666666.65901.rna.23 RNA gi|507574573|emb|CAVS020000028.1| 25250 25129 -2 - 122 5S RNA - none -
fig|6666666.65901.rna.24 RNA gi|507574579|emb|CAVS020000026.1| 98096 98011 -2 - 86 tRNA-Leu-GAG tRNAs
fig|6666666.65901.rna.25 RNA gi|507574582|emb|CAVS020000025.1| 64958 64886 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65901.rna.26 RNA gi|507574582|emb|CAVS020000025.1| 65065 64994 -1 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65901.rna.27 RNA gi|507574582|emb|CAVS020000025.1| 65154 65084 -3 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.65901.rna.28 RNA gi|507574582|emb|CAVS020000025.1| 65273 65201 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65901.rna.29 RNA gi|507574582|emb|CAVS020000025.1| 65380 65309 -1 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65901.rna.30 RNA gi|507574582|emb|CAVS020000025.1| 65475 65403 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65901.rna.31 RNA gi|507574582|emb|CAVS020000025.1| 65713 65784 1 + 72 tRNA-Val-CAC tRNAs
fig|6666666.65901.rna.32 RNA gi|507574588|emb|CAVS020000023.1| 3928 3856 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.65901.rna.33 RNA gi|507574594|emb|CAVS020000021.1| 893 821 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.65901.rna.34 RNA gi|507574597|emb|CAVS020000020.1| 13222 13295 1 + 74 tRNA-Met-CAT - none -
fig|6666666.65901.rna.35 RNA gi|507574603|emb|CAVS020000018.1| 6536 6607 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.65901.rna.36 RNA gi|507574603|emb|CAVS020000018.1| 6750 6823 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.65901.rna.37 RNA gi|507574606|emb|CAVS020000017.1| 9588 9660 3 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65901.rna.38 RNA gi|507574606|emb|CAVS020000017.1| 9702 9774 3 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65901.rna.39 RNA gi|507574606|emb|CAVS020000017.1| 30848 30929 2 + 82 tRNA-Leu-TAG - none -
fig|6666666.65901.rna.40 RNA gi|507574606|emb|CAVS020000017.1| 34520 34448 -2 - 73 tRNA-Lys-CTT - none -
fig|6666666.65901.rna.41 RNA gi|507574606|emb|CAVS020000017.1| 36153 36081 -3 - 73 tRNA-His-GTG - none -
fig|6666666.65901.rna.42 RNA gi|507574606|emb|CAVS020000017.1| 40338 40265 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.65901.rna.43 RNA gi|507574609|emb|CAVS020000016.1| 98 171 2 + 74 tRNA-Met-CAT - none -
fig|6666666.65901.rna.44 RNA gi|507574615|emb|CAVS020000014.1| 24602 24683 2 + 82 tRNA-Tyr-GTA - none -
fig|6666666.65901.rna.45 RNA gi|507574615|emb|CAVS020000014.1| 25007 25079 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.65901.rna.46 RNA gi|507574615|emb|CAVS020000014.1| 25131 25202 3 + 72 tRNA-Met-CAT - none -
fig|6666666.65901.rna.47 RNA gi|507574615|emb|CAVS020000014.1| 25267 25339 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.65901.rna.48 RNA gi|507574624|emb|CAVS020000011.1| 10598 10670 2 + 73 tRNA-Thr-CGT - none -
fig|6666666.65901.rna.49 RNA gi|507574624|emb|CAVS020000011.1| 33490 33576 1 + 87 tRNA-Undet-??? - none -
fig|6666666.65901.rna.50 RNA gi|507574627|emb|CAVS020000010.1| 24393 24320 -3 - 74 tRNA-Pro-CGG tRNAs
fig|6666666.65901.rna.51 RNA gi|507574633|emb|CAVS020000008.1| 6682 6597 -1 - 86 tRNA-Pseudo-GGA - none -
fig|6666666.65901.rna.52 RNA gi|507574636|emb|CAVS020000007.1| 3998 4082 2 + 85 tRNA-Ser-TGA - none -
fig|6666666.65901.rna.53 RNA gi|507574636|emb|CAVS020000007.1| 4664 4751 2 + 88 tRNA-Ser-GCT - none -
fig|6666666.65901.rna.54 RNA gi|507574636|emb|CAVS020000007.1| 4757 4829 2 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65901.rna.55 RNA gi|507574636|emb|CAVS020000007.1| 8784 8856 3 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65901.rna.56 RNA gi|507574636|emb|CAVS020000007.1| 13575 13659 3 + 85 tRNA-Ser-CGA tRNAs
fig|6666666.65901.rna.57 RNA gi|507574645|emb|CAVS020000004.1| 83752 83825 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.65901.rna.58 RNA gi|507574645|emb|CAVS020000004.1| 83844 83916 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.65901.rna.59 RNA gi|507574645|emb|CAVS020000004.1| 113862 113945 3 + 84 tRNA-Leu-CAG tRNAs