fig|6666666.65904.peg.1 CDS gi|481784874|gb|ARAV01000059.1| 189 1328 3 + 1140 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65904.peg.2 CDS gi|481784878|gb|ARAV01000058.1| 1569 157 -3 - 1413 hypothetical protein - none -
fig|6666666.65904.peg.3 CDS gi|481784882|gb|ARAV01000057.1| 331 852 1 + 522 hypothetical protein - none -
fig|6666666.65904.peg.4 CDS gi|481784882|gb|ARAV01000057.1| 1604 1134 -2 - 471 hypothetical protein - none -
fig|6666666.65904.peg.5 CDS gi|481784882|gb|ARAV01000057.1| 1768 1601 -1 - 168 hypothetical protein - none -
fig|6666666.65904.peg.6 CDS gi|481784886|gb|ARAV01000056.1| 18 1049 3 + 1032 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) - none -
fig|6666666.65904.peg.7 CDS gi|481784886|gb|ARAV01000056.1| 1171 1872 1 + 702 IncW-like replication protein - none -
fig|6666666.65904.peg.8 CDS gi|481784889|gb|ARAV01000055.1| 40 369 1 + 330 Transposase - none -
fig|6666666.65904.peg.9 CDS gi|481784889|gb|ARAV01000055.1| 716 600 -2 - 117 hypothetical protein - none -
fig|6666666.65904.peg.10 CDS gi|481784889|gb|ARAV01000055.1| 1319 1185 -2 - 135 hypothetical protein - none -
fig|6666666.65904.peg.11 CDS gi|481784893|gb|ARAV01000054.1| 1728 337 -3 - 1392 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65904.peg.12 CDS gi|481784893|gb|ARAV01000054.1| 1929 2405 3 + 477 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.13 CDS gi|481784897|gb|ARAV01000053.1| 894 457 -3 - 438 hypothetical protein - none -
fig|6666666.65904.peg.14 CDS gi|481784897|gb|ARAV01000053.1| 1568 963 -2 - 606 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.15 CDS gi|481784897|gb|ARAV01000053.1| 1788 1994 3 + 207 hypothetical protein - none -
fig|6666666.65904.peg.16 CDS gi|481784897|gb|ARAV01000053.1| 2039 2380 2 + 342 Death on curing protein, Doc toxin - none -
fig|6666666.65904.peg.17 CDS gi|481784900|gb|ARAV01000052.1| 837 448 -3 - 390 Mercuric resistance operon regulatory protein Mercury resistance operon
fig|6666666.65904.peg.18 CDS gi|481784900|gb|ARAV01000052.1| 936 2357 3 + 1422 Mercuric ion reductase (EC 1.16.1.1) Mercuric reductase;
Mercury resistance operon
fig|6666666.65904.peg.19 CDS gi|481784900|gb|ARAV01000052.1| 2666 2836 2 + 171 hypothetical protein - none -
fig|6666666.65904.peg.20 CDS gi|481784904|gb|ARAV01000051.1| 18 470 3 + 453 Resolvase/integrase - none -
fig|6666666.65904.peg.21 CDS gi|481784904|gb|ARAV01000051.1| 803 603 -2 - 201 hypothetical protein - none -
fig|6666666.65904.peg.22 CDS gi|481784904|gb|ARAV01000051.1| 1798 1013 -1 - 786 SCE15.07, unknown, len: 249aa - none -
fig|6666666.65904.peg.23 CDS gi|481784904|gb|ARAV01000051.1| 2542 2273 -1 - 270 hypothetical protein - none -
fig|6666666.65904.peg.24 CDS gi|481784904|gb|ARAV01000051.1| 2619 2891 3 + 273 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) - none -
fig|6666666.65904.peg.25 CDS gi|481784908|gb|ARAV01000050.1| 884 2416 2 + 1533 hypothetical protein - none -
fig|6666666.65904.peg.26 CDS gi|481784912|gb|ARAV01000049.1| 1037 831 -2 - 207 Mobile element protein - none -
fig|6666666.65904.peg.27 CDS gi|481784912|gb|ARAV01000049.1| 1264 1064 -1 - 201 Mobile element protein - none -
fig|6666666.65904.peg.28 CDS gi|481784916|gb|ARAV01000048.1| 957 136 -3 - 822 Drug resistance transporter EmrB/QacA subfamily - none -
fig|6666666.65904.peg.29 CDS gi|481784916|gb|ARAV01000048.1| 1486 1082 -1 - 405 putative transcriptional regulator (MerR family) - none -
fig|6666666.65904.peg.30 CDS gi|481784916|gb|ARAV01000048.1| 1656 3215 3 + 1560 Sulfate permease Cysteine Biosynthesis
fig|6666666.65904.peg.31 CDS gi|481784920|gb|ARAV01000047.1| 535 705 1 + 171 Transcriptional regulator ArsR family - none -
fig|6666666.65904.peg.32 CDS gi|481784920|gb|ARAV01000047.1| 706 1302 1 + 597 cadmium resistance transporter, putative - none -
fig|6666666.65904.peg.33 CDS gi|481784920|gb|ARAV01000047.1| 1608 1438 -3 - 171 site-specific recombinase/resolvase - none -
fig|6666666.65904.peg.34 CDS gi|481784920|gb|ARAV01000047.1| 2011 1754 -1 - 258 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.65904.peg.35 CDS gi|481784920|gb|ARAV01000047.1| 3424 2483 -1 - 942 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65904.peg.36 CDS gi|481784920|gb|ARAV01000047.1| 3386 3682 2 + 297 hypothetical protein - none -
fig|6666666.65904.peg.37 CDS gi|481784924|gb|ARAV01000046.1| 435 812 3 + 378 2,4-dichlorophenol 6-monooxygenase (EC 1.14.13.20) - none -
fig|6666666.65904.peg.38 CDS gi|481784924|gb|ARAV01000046.1| 1418 834 -2 - 585 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.39 CDS gi|481784924|gb|ARAV01000046.1| 3783 1396 -3 - 2388 FIG00548670: hypothetical protein - none -
fig|6666666.65904.peg.40 CDS gi|481784928|gb|ARAV01000045.1| 18 152 3 + 135 Mobile element protein - none -
fig|6666666.65904.peg.41 CDS gi|481784928|gb|ARAV01000045.1| 815 408 -2 - 408 Mobile element protein - none -
fig|6666666.65904.peg.42 CDS gi|481784928|gb|ARAV01000045.1| 1122 913 -3 - 210 Mobile element protein - none -
fig|6666666.65904.peg.43 CDS gi|481784928|gb|ARAV01000045.1| 2080 1430 -1 - 651 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.44 CDS gi|481784928|gb|ARAV01000045.1| 2797 2090 -1 - 708 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.65904.peg.45 CDS gi|481784928|gb|ARAV01000045.1| 4166 3375 -2 - 792 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65904.peg.46 CDS gi|481784931|gb|ARAV01000044.1| 595 53 -1 - 543 ABC transporter, ATP-binding protein - none -
fig|6666666.65904.peg.47 CDS gi|481784931|gb|ARAV01000044.1| 1367 663 -2 - 705 two-component system response regulator - none -
fig|6666666.65904.peg.48 CDS gi|481784931|gb|ARAV01000044.1| 2536 1364 -1 - 1173 two-component system sensor kinase - none -
fig|6666666.65904.peg.49 CDS gi|481784931|gb|ARAV01000044.1| 3286 2618 -1 - 669 hypothetical protein - none -
fig|6666666.65904.peg.50 CDS gi|481784931|gb|ARAV01000044.1| 4786 3644 -1 - 1143 hypothetical protein - none -
fig|6666666.65904.peg.51 CDS gi|481784935|gb|ARAV01000043.1| 12 212 3 + 201 Mobile element protein - none -
fig|6666666.65904.peg.52 CDS gi|481784935|gb|ARAV01000043.1| 369 1091 3 + 723 putative two-component system sensor kinase - none -
fig|6666666.65904.peg.53 CDS gi|481784935|gb|ARAV01000043.1| 1088 1750 2 + 663 two-component system response regulator - none -
fig|6666666.65904.peg.54 CDS gi|481784935|gb|ARAV01000043.1| 2146 2009 -1 - 138 hypothetical protein - none -
fig|6666666.65904.peg.55 CDS gi|481784935|gb|ARAV01000043.1| 3049 2195 -1 - 855 hypothetical protein - none -
fig|6666666.65904.peg.56 CDS gi|481784935|gb|ARAV01000043.1| 4395 3073 -3 - 1323 Putative membrane protein - none -
fig|6666666.65904.peg.57 CDS gi|481784935|gb|ARAV01000043.1| 5333 4392 -2 - 942 putative non-ribosomal peptide synthetase - none -
fig|6666666.65904.peg.58 CDS gi|481784935|gb|ARAV01000043.1| 5469 5305 -3 - 165 Mobile element protein - none -
fig|6666666.65904.peg.59 CDS gi|481784939|gb|ARAV01000042.1| 565 939 1 + 375 Resolvase - none -
fig|6666666.65904.peg.60 CDS gi|481784939|gb|ARAV01000042.1| 2457 2038 -3 - 420 hypothetical protein - none -
fig|6666666.65904.peg.61 CDS gi|481784939|gb|ARAV01000042.1| 2543 2776 2 + 234 putative transcriptional regulator - none -
fig|6666666.65904.peg.62 CDS gi|481784939|gb|ARAV01000042.1| 3126 3800 3 + 675 Mrr restriction system protein - none -
fig|6666666.65904.peg.63 CDS gi|481784939|gb|ARAV01000042.1| 4270 4091 -1 - 180 hypothetical protein - none -
fig|6666666.65904.peg.64 CDS gi|481784939|gb|ARAV01000042.1| 4732 4418 -1 - 315 hypothetical protein - none -
fig|6666666.65904.peg.65 CDS gi|481784939|gb|ARAV01000042.1| 5463 5657 3 + 195 hypothetical protein - none -
fig|6666666.65904.peg.66 CDS gi|481784943|gb|ARAV01000041.1| 2496 493 -3 - 2004 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.65904.peg.67 CDS gi|481784943|gb|ARAV01000041.1| 3796 2483 -1 - 1314 FIG036446: hypothetical protein - none -
fig|6666666.65904.peg.68 CDS gi|481784943|gb|ARAV01000041.1| 4923 5039 3 + 117 hypothetical protein - none -
fig|6666666.65904.peg.69 CDS gi|481784947|gb|ARAV01000040.1| 151 414 1 + 264 hypothetical protein - none -
fig|6666666.65904.peg.70 CDS gi|481784947|gb|ARAV01000040.1| 2343 796 -3 - 1548 hypothetical protein - none -
fig|6666666.65904.peg.71 CDS gi|481784947|gb|ARAV01000040.1| 2773 2528 -1 - 246 hypothetical protein - none -
fig|6666666.65904.peg.72 CDS gi|481784947|gb|ARAV01000040.1| 3327 2782 -3 - 546 Plasmid partitioning protein ParA - none -
fig|6666666.65904.peg.73 CDS gi|481784947|gb|ARAV01000040.1| 4855 5508 1 + 654 hypothetical protein - none -
fig|6666666.65904.peg.74 CDS gi|481784951|gb|ARAV01000039.1| 1983 253 -3 - 1731 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.65904.peg.75 CDS gi|481784951|gb|ARAV01000039.1| 2741 2628 -2 - 114 hypothetical protein - none -
fig|6666666.65904.peg.76 CDS gi|481784951|gb|ARAV01000039.1| 4162 2786 -1 - 1377 hypothetical protein - none -
fig|6666666.65904.peg.77 CDS gi|481784951|gb|ARAV01000039.1| 5135 4500 -2 - 636 Potassium uptake protein, integral membrane component, KtrA - none -
fig|6666666.65904.peg.78 CDS gi|481784951|gb|ARAV01000039.1| 6561 5185 -3 - 1377 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.65904.peg.79 CDS gi|481784955|gb|ARAV01000038.1| 25 198 1 + 174 Mobile element protein - none -
fig|6666666.65904.peg.80 CDS gi|481784955|gb|ARAV01000038.1| 572 225 -2 - 348 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.81 CDS gi|481784955|gb|ARAV01000038.1| 672 1013 3 + 342 permease of the major facilitator superfamily - none -
fig|6666666.65904.peg.82 CDS gi|481784955|gb|ARAV01000038.1| 1131 1883 3 + 753 permease of the major facilitator superfamily - none -
fig|6666666.65904.peg.83 CDS gi|481784955|gb|ARAV01000038.1| 4025 1890 -2 - 2136 hypothetical protein - none -
fig|6666666.65904.peg.84 CDS gi|481784955|gb|ARAV01000038.1| 4505 4110 -2 - 396 hypothetical protein - none -
fig|6666666.65904.peg.85 CDS gi|481784955|gb|ARAV01000038.1| 5591 4713 -2 - 879 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65904.peg.86 CDS gi|481784955|gb|ARAV01000038.1| 5681 6946 2 + 1266 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65904.peg.87 CDS gi|481784955|gb|ARAV01000038.1| 7186 7323 1 + 138 hypothetical protein - none -
fig|6666666.65904.peg.88 CDS gi|481784959|gb|ARAV01000037.1| 1352 438 -2 - 915 hypothetical protein - none -
fig|6666666.65904.peg.89 CDS gi|481784959|gb|ARAV01000037.1| 2346 1345 -3 - 1002 hypothetical protein - none -
fig|6666666.65904.peg.90 CDS gi|481784959|gb|ARAV01000037.1| 3002 3124 2 + 123 hypothetical protein - none -
fig|6666666.65904.peg.91 CDS gi|481784959|gb|ARAV01000037.1| 4710 3325 -3 - 1386 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.65904.peg.92 CDS gi|481784959|gb|ARAV01000037.1| 4705 5190 1 + 486 hypothetical protein - none -
fig|6666666.65904.peg.93 CDS gi|481784959|gb|ARAV01000037.1| 5481 5359 -3 - 123 hypothetical protein - none -
fig|6666666.65904.peg.94 CDS gi|481784959|gb|ARAV01000037.1| 6024 5788 -3 - 237 hypothetical protein - none -
fig|6666666.65904.peg.95 CDS gi|481784959|gb|ARAV01000037.1| 6023 6136 2 + 114 hypothetical protein - none -
fig|6666666.65904.peg.96 CDS gi|481784959|gb|ARAV01000037.1| 6984 6310 -3 - 675 Mobile element protein - none -
fig|6666666.65904.peg.97 CDS gi|481784963|gb|ARAV01000036.1| 1174 503 -1 - 672 CRISPR-associated protein, CT1974 - none -
fig|6666666.65904.peg.98 CDS gi|481784963|gb|ARAV01000036.1| 1878 1171 -3 - 708 CRISPR-associated protein, CT1976 - none -
fig|6666666.65904.peg.99 CDS gi|481784963|gb|ARAV01000036.1| 3024 1882 -3 - 1143 CRISPR-associated protein, Cse4 family CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.65904.peg.100 CDS gi|481784963|gb|ARAV01000036.1| 3388 3044 -1 - 345 CRISPR-associated protein, Cse2 family CRISPRs
fig|6666666.65904.peg.101 CDS gi|481784963|gb|ARAV01000036.1| 5418 3706 -3 - 1713 CRISPR-associated protein, Cse1 family CRISPRs
fig|6666666.65904.peg.102 CDS gi|481784963|gb|ARAV01000036.1| 7569 5506 -3 - 2064 CRISPR-associated helicase Cas3, protein CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.65904.peg.103 CDS gi|481784963|gb|ARAV01000036.1| 7865 7665 -2 - 201 Mobile element protein - none -
fig|6666666.65904.peg.104 CDS gi|481784967|gb|ARAV01000035.1| 115 1116 1 + 1002 D-amino-acid oxidase (EC 1.4.3.3) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65904.peg.105 CDS gi|481784967|gb|ARAV01000035.1| 1113 1436 3 + 324 hypothetical protein - none -
fig|6666666.65904.peg.106 CDS gi|481784967|gb|ARAV01000035.1| 1436 2953 2 + 1518 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65904.peg.107 CDS gi|481784967|gb|ARAV01000035.1| 3154 3954 1 + 801 4-hydroxyproline epimerase (EC 5.1.1.8) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65904.peg.108 CDS gi|481784967|gb|ARAV01000035.1| 4010 5572 2 + 1563 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) Proline, 4-hydroxyproline uptake and utilization;
Xylose utilization
fig|6666666.65904.peg.109 CDS gi|481784967|gb|ARAV01000035.1| 6167 6006 -2 - 162 hypothetical protein - none -
fig|6666666.65904.peg.110 CDS gi|481784967|gb|ARAV01000035.1| 6407 6174 -2 - 234 transposase - none -
fig|6666666.65904.peg.111 CDS gi|481784967|gb|ARAV01000035.1| 7427 7161 -2 - 267 Mobile element protein - none -
fig|6666666.65904.peg.112 CDS gi|481784967|gb|ARAV01000035.1| 7792 8253 1 + 462 Mobile element protein - none -
fig|6666666.65904.peg.113 CDS gi|481784967|gb|ARAV01000035.1| 8300 8515 2 + 216 Mobile element protein - none -
fig|6666666.65904.peg.114 CDS gi|481784971|gb|ARAV01000034.1| 1446 1057 -3 - 390 CRISPR-associated protein Cas1 CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.65904.peg.115 CDS gi|481784975|gb|ARAV01000033.1| 57 179 3 + 123 hypothetical protein - none -
fig|6666666.65904.peg.116 CDS gi|481784975|gb|ARAV01000033.1| 2543 2743 2 + 201 hypothetical protein - none -
fig|6666666.65904.peg.117 CDS gi|481784983|gb|ARAV01000031.1| 1210 302 -1 - 909 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65904.peg.118 CDS gi|481784983|gb|ARAV01000031.1| 1969 1214 -1 - 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.65904.peg.119 CDS gi|481784983|gb|ARAV01000031.1| 3015 1966 -3 - 1050 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.65904.peg.120 CDS gi|481784983|gb|ARAV01000031.1| 3997 3008 -1 - 990 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.65904.peg.121 CDS gi|481784983|gb|ARAV01000031.1| 4998 4000 -3 - 999 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.65904.peg.122 CDS gi|481784983|gb|ARAV01000031.1| 5623 5189 -1 - 435 hypothetical protein - none -
fig|6666666.65904.peg.123 CDS gi|481784983|gb|ARAV01000031.1| 6733 5711 -1 - 1023 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.65904.peg.124 CDS gi|481784983|gb|ARAV01000031.1| 6879 7256 3 + 378 transcriptional regulator, ArsR family - none -
fig|6666666.65904.peg.125 CDS gi|481784983|gb|ARAV01000031.1| 7253 8899 2 + 1647 Sulfate permease Cysteine Biosynthesis
fig|6666666.65904.peg.126 CDS gi|481784983|gb|ARAV01000031.1| 9405 9578 3 + 174 hypothetical protein - none -
fig|6666666.65904.peg.127 CDS gi|481784983|gb|ARAV01000031.1| 9864 10514 3 + 651 Phage antirepressor protein #of cryptic prophage CP-933M - none -
fig|6666666.65904.peg.128 CDS gi|481784983|gb|ARAV01000031.1| 10800 10477 -3 - 324 hypothetical protein - none -
fig|6666666.65904.peg.129 CDS gi|481784983|gb|ARAV01000031.1| 10810 11481 1 + 672 probably phage genome - none -
fig|6666666.65904.peg.130 CDS gi|481784983|gb|ARAV01000031.1| 11541 11945 3 + 405 hypothetical protein - none -
fig|6666666.65904.peg.131 CDS gi|481784983|gb|ARAV01000031.1| 12151 11939 -1 - 213 Mobile element protein - none -
fig|6666666.65904.peg.132 CDS gi|481784987|gb|ARAV01000030.1| 2753 276 -2 - 2478 hypothetical protein - none -
fig|6666666.65904.peg.133 CDS gi|481784987|gb|ARAV01000030.1| 3837 2923 -3 - 915 Transcriptional regulator, LysR family CBSS-349102.4.peg.3442
fig|6666666.65904.peg.134 CDS gi|481784987|gb|ARAV01000030.1| 3939 4991 3 + 1053 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.135 CDS gi|481784987|gb|ARAV01000030.1| 5002 5871 1 + 870 Catechol 1,2-dioxygenase 1 (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.65904.peg.136 CDS gi|481784987|gb|ARAV01000030.1| 5884 7719 1 + 1836 2,4-dichlorophenol 6-monooxygenase (EC 1.14.13.20) - none -
fig|6666666.65904.peg.137 CDS gi|481784987|gb|ARAV01000030.1| 10616 7824 -2 - 2793 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65904.peg.138 CDS gi|481784987|gb|ARAV01000030.1| 11095 10754 -1 - 342 hypothetical protein - none -
fig|6666666.65904.peg.139 CDS gi|481784987|gb|ARAV01000030.1| 11678 11511 -2 - 168 hypothetical protein - none -
fig|6666666.65904.peg.140 CDS gi|481784987|gb|ARAV01000030.1| 11710 12033 1 + 324 hypothetical protein - none -
fig|6666666.65904.peg.141 CDS gi|481784987|gb|ARAV01000030.1| 12068 12652 2 + 585 hypothetical protein - none -
fig|6666666.65904.peg.142 CDS gi|481784987|gb|ARAV01000030.1| 12810 12649 -3 - 162 hypothetical protein - none -
fig|6666666.65904.peg.143 CDS gi|481784991|gb|ARAV01000029.1| 16 189 1 + 174 Mobile element protein - none -
fig|6666666.65904.peg.144 CDS gi|481784991|gb|ARAV01000029.1| 312 632 3 + 321 hypothetical protein - none -
fig|6666666.65904.peg.145 CDS gi|481784991|gb|ARAV01000029.1| 935 2557 2 + 1623 hypothetical protein - none -
fig|6666666.65904.peg.146 CDS gi|481784991|gb|ARAV01000029.1| 2708 4234 2 + 1527 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65904.peg.147 CDS gi|481784991|gb|ARAV01000029.1| 4256 4471 2 + 216 hypothetical protein - none -
fig|6666666.65904.peg.148 CDS gi|481784991|gb|ARAV01000029.1| 4471 5061 1 + 591 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65904.peg.149 CDS gi|481784991|gb|ARAV01000029.1| 5087 5485 2 + 399 FIG00547406: hypothetical protein - none -
fig|6666666.65904.peg.150 CDS gi|481784991|gb|ARAV01000029.1| 6232 5690 -1 - 543 hypothetical protein - none -
fig|6666666.65904.peg.151 CDS gi|481784991|gb|ARAV01000029.1| 7396 6326 -1 - 1071 FIG00548218: hypothetical protein - none -
fig|6666666.65904.peg.152 CDS gi|481784991|gb|ARAV01000029.1| 7686 8570 3 + 885 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65904.peg.153 CDS gi|481784991|gb|ARAV01000029.1| 8763 10535 3 + 1773 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.154 CDS gi|481784991|gb|ARAV01000029.1| 10567 11040 1 + 474 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65904.peg.155 CDS gi|481784991|gb|ARAV01000029.1| 11276 11037 -2 - 240 hypothetical protein - none -
fig|6666666.65904.peg.156 CDS gi|481784991|gb|ARAV01000029.1| 12491 11610 -2 - 882 Beta-glucoside bgl operon antiterminator, BglG family Beta-Glucoside Metabolism
fig|6666666.65904.peg.157 CDS gi|481784991|gb|ARAV01000029.1| 13931 12516 -2 - 1416 Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65904.peg.158 CDS gi|481784991|gb|ARAV01000029.1| 15984 14002 -3 - 1983 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65904.peg.159 CDS gi|481784995|gb|ARAV01000028.1| 371 508 2 + 138 hypothetical protein - none -
fig|6666666.65904.peg.160 CDS gi|481784995|gb|ARAV01000028.1| 1699 2907 1 + 1209 Antigen 85-B precursor (85B) (Extracellular alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl transferase 85B) (EC 2.3.1.-) - none -
fig|6666666.65904.peg.161 CDS gi|481784995|gb|ARAV01000028.1| 3770 2904 -2 - 867 putative secreted hydrolase - none -
fig|6666666.65904.peg.162 CDS gi|481784995|gb|ARAV01000028.1| 4412 3864 -2 - 549 hypothetical protein - none -
fig|6666666.65904.peg.163 CDS gi|481784995|gb|ARAV01000028.1| 6477 4480 -3 - 1998 hypothetical protein - none -
fig|6666666.65904.peg.164 CDS gi|481784995|gb|ARAV01000028.1| 7280 6672 -2 - 609 Transcriptional regulator, IclR family - none -
fig|6666666.65904.peg.165 CDS gi|481784995|gb|ARAV01000028.1| 7422 8843 3 + 1422 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65904.peg.166 CDS gi|481784995|gb|ARAV01000028.1| 8872 9468 1 + 597 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65904.peg.167 CDS gi|481784995|gb|ARAV01000028.1| 9659 10606 2 + 948 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.168 CDS gi|481784995|gb|ARAV01000028.1| 10609 11430 1 + 822 integral membrane protein - none -
fig|6666666.65904.peg.169 CDS gi|481784995|gb|ARAV01000028.1| 11479 12582 1 + 1104 two-component system sensor kinase - none -
fig|6666666.65904.peg.170 CDS gi|481784995|gb|ARAV01000028.1| 12593 13219 2 + 627 putative two-component response regulator - none -
fig|6666666.65904.peg.171 CDS gi|481784995|gb|ARAV01000028.1| 14223 13222 -3 - 1002 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65904.peg.172 CDS gi|481784995|gb|ARAV01000028.1| 14308 15306 1 + 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.173 CDS gi|481784995|gb|ARAV01000028.1| 15326 16378 2 + 1053 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65904.peg.174 CDS gi|481784999|gb|ARAV01000027.1| 1518 418 -3 - 1101 benzyl alcohol dehydrogenase - none -
fig|6666666.65904.peg.175 CDS gi|481784999|gb|ARAV01000027.1| 1652 2245 2 + 594 hypothetical protein - none -
fig|6666666.65904.peg.176 CDS gi|481784999|gb|ARAV01000027.1| 2295 3182 3 + 888 hypothetical protein - none -
fig|6666666.65904.peg.177 CDS gi|481784999|gb|ARAV01000027.1| 6354 3169 -3 - 3186 putative helicase - none -
fig|6666666.65904.peg.178 CDS gi|481784999|gb|ARAV01000027.1| 6626 8029 2 + 1404 metabolite-proton symporter - none -
fig|6666666.65904.peg.179 CDS gi|481784999|gb|ARAV01000027.1| 9018 8026 -3 - 993 Transcriptional regulator, LysR family CBSS-349102.4.peg.3442
fig|6666666.65904.peg.180 CDS gi|481784999|gb|ARAV01000027.1| 9090 10001 3 + 912 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) - none -
fig|6666666.65904.peg.181 CDS gi|481784999|gb|ARAV01000027.1| 10038 11537 3 + 1500 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) - none -
fig|6666666.65904.peg.182 CDS gi|481784999|gb|ARAV01000027.1| 16434 11617 -3 - 4818 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.65904.peg.183 CDS gi|481784999|gb|ARAV01000027.1| 17637 16438 -3 - 1200 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.65904.peg.184 CDS gi|481784999|gb|ARAV01000027.1| 17917 17717 -1 - 201 Mobile element protein - none -
fig|6666666.65904.peg.185 CDS gi|481785003|gb|ARAV01000026.1| 485 363 -2 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65904.peg.186 CDS gi|481785003|gb|ARAV01000026.1| 2006 615 -2 - 1392 FIG00544486: hypothetical protein - none -
fig|6666666.65904.peg.187 CDS gi|481785003|gb|ARAV01000026.1| 2042 2884 2 + 843 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.65904.peg.188 CDS gi|481785003|gb|ARAV01000026.1| 3729 2893 -3 - 837 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.65904.peg.189 CDS gi|481785003|gb|ARAV01000026.1| 3801 4376 3 + 576 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.190 CDS gi|481785003|gb|ARAV01000026.1| 4445 6793 2 + 2349 Integral membrane protein - none -
fig|6666666.65904.peg.191 CDS gi|481785003|gb|ARAV01000026.1| 7825 7094 -1 - 732 FIG00544592: hypothetical protein - none -
fig|6666666.65904.peg.192 CDS gi|481785003|gb|ARAV01000026.1| 8407 7859 -1 - 549 FIG00544597: hypothetical protein - none -
fig|6666666.65904.peg.193 CDS gi|481785003|gb|ARAV01000026.1| 10119 8464 -3 - 1656 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.65904.peg.194 CDS gi|481785003|gb|ARAV01000026.1| 10132 10260 1 + 129 hypothetical protein - none -
fig|6666666.65904.peg.195 CDS gi|481785003|gb|ARAV01000026.1| 10420 11838 1 + 1419 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.65904.peg.196 CDS gi|481785003|gb|ARAV01000026.1| 11860 12198 1 + 339 CrcB protein - none -
fig|6666666.65904.peg.197 CDS gi|481785003|gb|ARAV01000026.1| 12177 12542 3 + 366 CrcB protein - none -
fig|6666666.65904.peg.198 CDS gi|481785003|gb|ARAV01000026.1| 15107 12549 -2 - 2559 ABC-type transporter, permease component - none -
fig|6666666.65904.peg.199 CDS gi|481785003|gb|ARAV01000026.1| 15920 15111 -2 - 810 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.200 CDS gi|481785003|gb|ARAV01000026.1| 16057 17766 1 + 1710 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65904.peg.201 CDS gi|481785007|gb|ARAV01000025.1| 431 1183 2 + 753 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65904.peg.202 CDS gi|481785007|gb|ARAV01000025.1| 2979 1414 -3 - 1566 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.65904.peg.203 CDS gi|481785007|gb|ARAV01000025.1| 3596 3114 -2 - 483 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65904.peg.204 CDS gi|481785007|gb|ARAV01000025.1| 5145 3661 -3 - 1485 Multicopper oxidase Copper homeostasis
fig|6666666.65904.peg.205 CDS gi|481785007|gb|ARAV01000025.1| 5803 5228 -1 - 576 putative exported protein - none -
fig|6666666.65904.peg.206 CDS gi|481785007|gb|ARAV01000025.1| 6098 5871 -2 - 228 FIG00549074: hypothetical protein - none -
fig|6666666.65904.peg.207 CDS gi|481785007|gb|ARAV01000025.1| 6207 6929 3 + 723 two-component system, response regulator - none -
fig|6666666.65904.peg.208 CDS gi|481785007|gb|ARAV01000025.1| 6926 8074 2 + 1149 two-component system, sensory transduction histidine kinase - none -
fig|6666666.65904.peg.209 CDS gi|481785007|gb|ARAV01000025.1| 8136 8309 3 + 174 FIG00549418: hypothetical protein - none -
fig|6666666.65904.peg.210 CDS gi|481785007|gb|ARAV01000025.1| 8281 8517 1 + 237 Cation transport ATPase - none -
fig|6666666.65904.peg.211 CDS gi|481785007|gb|ARAV01000025.1| 8696 8499 -2 - 198 FIG01257340: hypothetical protein - none -
fig|6666666.65904.peg.212 CDS gi|481785007|gb|ARAV01000025.1| 8682 10748 3 + 2067 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65904.peg.213 CDS gi|481785007|gb|ARAV01000025.1| 10840 11502 1 + 663 hypothetical protein - none -
fig|6666666.65904.peg.214 CDS gi|481785007|gb|ARAV01000025.1| 11590 12642 1 + 1053 NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal (EC 1.2.1.59) - none -
fig|6666666.65904.peg.215 CDS gi|481785007|gb|ARAV01000025.1| 13638 12754 -3 - 885 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.216 CDS gi|481785007|gb|ARAV01000025.1| 16493 14058 -2 - 2436 Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9); Fructose-6-phosphate phosphoketolase (EC 4.1.2.22) Fermentations: Lactate;
Fermentations: Lactate;
Pentose phosphate pathway;
Pentose phosphate pathway
fig|6666666.65904.peg.217 CDS gi|481785007|gb|ARAV01000025.1| 17086 16676 -1 - 411 Ferredoxin Inorganic Sulfur Assimilation;
Soluble cytochromes and functionally related electron carriers
fig|6666666.65904.peg.218 CDS gi|481785007|gb|ARAV01000025.1| 17456 18064 2 + 609 FIG00548649: hypothetical protein - none -
fig|6666666.65904.peg.219 CDS gi|481785007|gb|ARAV01000025.1| 18360 18148 -3 - 213 Mobile element protein - none -
fig|6666666.65904.peg.220 CDS gi|481785011|gb|ARAV01000024.1| 876 652 -3 - 225 hypothetical protein - none -
fig|6666666.65904.peg.221 CDS gi|481785011|gb|ARAV01000024.1| 895 1341 1 + 447 hypothetical protein - none -
fig|6666666.65904.peg.222 CDS gi|481785011|gb|ARAV01000024.1| 1992 1351 -3 - 642 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65904.peg.223 CDS gi|481785011|gb|ARAV01000024.1| 2148 2750 3 + 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65904.peg.224 CDS gi|481785011|gb|ARAV01000024.1| 2920 3549 1 + 630 hypothetical protein - none -
fig|6666666.65904.peg.225 CDS gi|481785011|gb|ARAV01000024.1| 5001 4111 -3 - 891 putative transcription regulator - none -
fig|6666666.65904.peg.226 CDS gi|481785011|gb|ARAV01000024.1| 5072 6271 2 + 1200 putative transport protein - none -
fig|6666666.65904.peg.227 CDS gi|481785011|gb|ARAV01000024.1| 6412 7998 1 + 1587 FIG00544207: hypothetical protein - none -
fig|6666666.65904.peg.228 CDS gi|481785011|gb|ARAV01000024.1| 9343 7985 -1 - 1359 FIG00544355: hypothetical protein - none -
fig|6666666.65904.peg.229 CDS gi|481785011|gb|ARAV01000024.1| 9594 10229 3 + 636 FIG071084: hypothetical protein - none -
fig|6666666.65904.peg.230 CDS gi|481785011|gb|ARAV01000024.1| 10891 10253 -1 - 639 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65904.peg.231 CDS gi|481785011|gb|ARAV01000024.1| 12153 10888 -3 - 1266 Hemoglobin-dependent two component system, sensory histidine kinase HrrS - none -
fig|6666666.65904.peg.232 CDS gi|481785011|gb|ARAV01000024.1| 12494 13483 2 + 990 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster
fig|6666666.65904.peg.233 CDS gi|481785011|gb|ARAV01000024.1| 14037 13480 -3 - 558 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.234 CDS gi|481785011|gb|ARAV01000024.1| 14283 14777 3 + 495 hypothetical protein - none -
fig|6666666.65904.peg.235 CDS gi|481785011|gb|ARAV01000024.1| 15306 14806 -3 - 501 hypothetical protein - none -
fig|6666666.65904.peg.236 CDS gi|481785011|gb|ARAV01000024.1| 15938 15681 -2 - 258 Transglycosylase-associated protein - none -
fig|6666666.65904.peg.237 CDS gi|481785011|gb|ARAV01000024.1| 17072 16173 -2 - 900 Universal stress protein family - none -
fig|6666666.65904.peg.238 CDS gi|481785011|gb|ARAV01000024.1| 17306 17178 -2 - 129 hypothetical protein - none -
fig|6666666.65904.peg.239 CDS gi|481785011|gb|ARAV01000024.1| 17446 18303 1 + 858 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65904.peg.240 CDS gi|481785015|gb|ARAV01000023.1| 22 195 1 + 174 Mobile element protein - none -
fig|6666666.65904.peg.241 CDS gi|481785015|gb|ARAV01000023.1| 1185 1655 3 + 471 FIG00544492: hypothetical protein - none -
fig|6666666.65904.peg.242 CDS gi|481785015|gb|ARAV01000023.1| 1752 2264 3 + 513 ferritin - none -
fig|6666666.65904.peg.243 CDS gi|481785015|gb|ARAV01000023.1| 2390 3310 2 + 921 Plant-induced nitrilase (EC 3.5.5.1), hydrolyses beta-cyano-L-alanine Nitrilase
fig|6666666.65904.peg.244 CDS gi|481785015|gb|ARAV01000023.1| 3636 3797 3 + 162 hypothetical protein - none -
fig|6666666.65904.peg.245 CDS gi|481785015|gb|ARAV01000023.1| 3984 4844 3 + 861 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.246 CDS gi|481785015|gb|ARAV01000023.1| 6411 4897 -3 - 1515 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.247 CDS gi|481785015|gb|ARAV01000023.1| 7961 6435 -2 - 1527 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.248 CDS gi|481785015|gb|ARAV01000023.1| 8187 10427 3 + 2241 hypothetical protein - none -
fig|6666666.65904.peg.249 CDS gi|481785015|gb|ARAV01000023.1| 10394 11494 2 + 1101 McrBC 5-methylcytosine restriction system component - none -
fig|6666666.65904.peg.250 CDS gi|481785015|gb|ARAV01000023.1| 13551 11491 -3 - 2061 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.65904.peg.251 CDS gi|481785015|gb|ARAV01000023.1| 14398 13607 -1 - 792 FIG00547049: hypothetical protein - none -
fig|6666666.65904.peg.252 CDS gi|481785015|gb|ARAV01000023.1| 14608 15759 1 + 1152 No significant database matches - none -
fig|6666666.65904.peg.253 CDS gi|481785015|gb|ARAV01000023.1| 16556 15765 -2 - 792 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65904.peg.254 CDS gi|481785015|gb|ARAV01000023.1| 17388 16567 -3 - 822 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65904.peg.255 CDS gi|481785015|gb|ARAV01000023.1| 17428 18534 1 + 1107 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65904.peg.256 CDS gi|481785015|gb|ARAV01000023.1| 18577 19269 1 + 693 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65904.peg.257 CDS gi|481785015|gb|ARAV01000023.1| 19289 20191 2 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65904.peg.258 CDS gi|481785015|gb|ARAV01000023.1| 20216 20704 2 + 489 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65904.peg.259 CDS gi|481785015|gb|ARAV01000023.1| 20701 21060 1 + 360 FIG016027: protein of unknown function YeaO - none -
fig|6666666.65904.peg.260 CDS gi|481785015|gb|ARAV01000023.1| 21057 21743 3 + 687 short chain dehydrogenase - none -
fig|6666666.65904.peg.261 CDS gi|481785015|gb|ARAV01000023.1| 23381 22239 -2 - 1143 Integrase - none -
fig|6666666.65904.peg.262 CDS gi|481785015|gb|ARAV01000023.1| 23636 23424 -2 - 213 Mobile element protein - none -
fig|6666666.65904.peg.263 CDS gi|481785019|gb|ARAV01000022.1| 959 57 -2 - 903 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.65904.peg.264 CDS gi|481785019|gb|ARAV01000022.1| 1090 956 -1 - 135 hypothetical protein - none -
fig|6666666.65904.peg.265 CDS gi|481785019|gb|ARAV01000022.1| 1646 2452 2 + 807 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.65904.peg.266 CDS gi|481785019|gb|ARAV01000022.1| 2594 3559 2 + 966 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.65904.peg.267 CDS gi|481785019|gb|ARAV01000022.1| 3782 3621 -2 - 162 Unnamed protein product - none -
fig|6666666.65904.peg.268 CDS gi|481785019|gb|ARAV01000022.1| 3828 3950 3 + 123 hypothetical protein - none -
fig|6666666.65904.peg.269 CDS gi|481785019|gb|ARAV01000022.1| 4868 4191 -2 - 678 PUTATIVE TRANSMEMBRANE PROTEIN - none -
fig|6666666.65904.peg.270 CDS gi|481785019|gb|ARAV01000022.1| 4930 5700 1 + 771 Transcriptional regulator, AraC family - none -
fig|6666666.65904.peg.271 CDS gi|481785019|gb|ARAV01000022.1| 6306 5692 -3 - 615 Transporter, LysE family - none -
fig|6666666.65904.peg.272 CDS gi|481785019|gb|ARAV01000022.1| 6373 6882 1 + 510 Transcriptional regulator, AsnC family - none -
fig|6666666.65904.peg.273 CDS gi|481785019|gb|ARAV01000022.1| 6896 7333 2 + 438 hypothetical protein - none -
fig|6666666.65904.peg.274 CDS gi|481785019|gb|ARAV01000022.1| 7745 7915 2 + 171 hypothetical protein - none -
fig|6666666.65904.peg.275 CDS gi|481785019|gb|ARAV01000022.1| 8472 8125 -3 - 348 hypothetical protein - none -
fig|6666666.65904.peg.276 CDS gi|481785019|gb|ARAV01000022.1| 9485 8562 -2 - 924 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.65904.peg.277 CDS gi|481785019|gb|ARAV01000022.1| 10744 9650 -1 - 1095 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65904.peg.278 CDS gi|481785019|gb|ARAV01000022.1| 12357 10798 -3 - 1560 Gluconate transporter family protein D-gluconate and ketogluconates metabolism
fig|6666666.65904.peg.279 CDS gi|481785019|gb|ARAV01000022.1| 13198 12512 -1 - 687 Transcriptional regulator, GntR family - none -
fig|6666666.65904.peg.280 CDS gi|481785019|gb|ARAV01000022.1| 14014 13316 -1 - 699 ABC transport system ATP-binding protein - none -
fig|6666666.65904.peg.281 CDS gi|481785019|gb|ARAV01000022.1| 15014 14016 -2 - 999 FIG00545752: hypothetical protein - none -
fig|6666666.65904.peg.282 CDS gi|481785019|gb|ARAV01000022.1| 15119 16252 2 + 1134 two component system histidine kinase - none -
fig|6666666.65904.peg.283 CDS gi|481785019|gb|ARAV01000022.1| 16245 16853 3 + 609 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65904.peg.284 CDS gi|481785019|gb|ARAV01000022.1| 17770 16874 -1 - 897 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65904.peg.285 CDS gi|481785019|gb|ARAV01000022.1| 18534 17773 -3 - 762 expressed protein - none -
fig|6666666.65904.peg.286 CDS gi|481785019|gb|ARAV01000022.1| 18710 19369 2 + 660 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.287 CDS gi|481785019|gb|ARAV01000022.1| 19399 20421 1 + 1023 monooxygenase, putative - none -
fig|6666666.65904.peg.288 CDS gi|481785019|gb|ARAV01000022.1| 20730 20425 -3 - 306 hypothetical protein - none -
fig|6666666.65904.peg.289 CDS gi|481785019|gb|ARAV01000022.1| 20817 21977 3 + 1161 FIG00543893: hypothetical protein - none -
fig|6666666.65904.peg.290 CDS gi|481785019|gb|ARAV01000022.1| 22235 21981 -2 - 255 hypothetical protein - none -
fig|6666666.65904.peg.291 CDS gi|481785019|gb|ARAV01000022.1| 22482 22267 -3 - 216 hypothetical protein - none -
fig|6666666.65904.peg.292 CDS gi|481785019|gb|ARAV01000022.1| 22795 22655 -1 - 141 hypothetical protein - none -
fig|6666666.65904.peg.293 CDS gi|481785019|gb|ARAV01000022.1| 22974 24605 3 + 1632 TPP-requiring enzyme co-localized with fatty acid metabolic genes - none -
fig|6666666.65904.peg.294 CDS gi|481785019|gb|ARAV01000022.1| 24934 24752 -1 - 183 hypothetical protein - none -
fig|6666666.65904.peg.295 CDS gi|481785019|gb|ARAV01000022.1| 25735 24944 -1 - 792 4-oxalocrotonate decarboxylase (EC 4.1.1.77) - none -
fig|6666666.65904.peg.296 CDS gi|481785019|gb|ARAV01000022.1| 27293 25836 -2 - 1458 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.65904.peg.297 CDS gi|481785019|gb|ARAV01000022.1| 27906 27706 -3 - 201 Mobile element protein - none -
fig|6666666.65904.peg.298 CDS gi|481785023|gb|ARAV01000021.1| 164 286 2 + 123 hypothetical protein - none -
fig|6666666.65904.peg.299 CDS gi|481785023|gb|ARAV01000021.1| 975 1628 3 + 654 putative branched-chain amino acid permease - none -
fig|6666666.65904.peg.300 CDS gi|481785023|gb|ARAV01000021.1| 1625 1951 2 + 327 hypothetical protein - none -
fig|6666666.65904.peg.301 CDS gi|481785023|gb|ARAV01000021.1| 2200 1964 -1 - 237 hypothetical protein - none -
fig|6666666.65904.peg.302 CDS gi|481785023|gb|ARAV01000021.1| 2342 4381 2 + 2040 N-methylhydantoinase A (EC 3.5.2.14) Creatine and Creatinine Degradation;
Hydantoin metabolism
fig|6666666.65904.peg.303 CDS gi|481785023|gb|ARAV01000021.1| 4378 5958 1 + 1581 N-methylhydantoinase B (EC 3.5.2.14) Creatine and Creatinine Degradation;
Hydantoin metabolism
fig|6666666.65904.peg.304 CDS gi|481785023|gb|ARAV01000021.1| 7527 5968 -3 - 1560 Sulfate permease Cysteine Biosynthesis
fig|6666666.65904.peg.305 CDS gi|481785023|gb|ARAV01000021.1| 8189 7635 -2 - 555 hypothetical protein - none -
fig|6666666.65904.peg.306 CDS gi|481785023|gb|ARAV01000021.1| 9319 8258 -1 - 1062 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65904.peg.307 CDS gi|481785023|gb|ARAV01000021.1| 10116 9391 -3 - 726 hypothetical protein - none -
fig|6666666.65904.peg.308 CDS gi|481785023|gb|ARAV01000021.1| 10393 11157 1 + 765 Short chain dehydrogenase - none -
fig|6666666.65904.peg.309 CDS gi|481785023|gb|ARAV01000021.1| 11343 12695 3 + 1353 hypothetical protein - none -
fig|6666666.65904.peg.310 CDS gi|481785023|gb|ARAV01000021.1| 12697 12993 1 + 297 hypothetical membrane protein - none -
fig|6666666.65904.peg.311 CDS gi|481785023|gb|ARAV01000021.1| 13544 12990 -2 - 555 Transcriptional regulator, GntR family - none -
fig|6666666.65904.peg.312 CDS gi|481785023|gb|ARAV01000021.1| 13727 16525 2 + 2799 Fe-S protein, homolog of lactate dehydrogenase SO1521 - none -
fig|6666666.65904.peg.313 CDS gi|481785023|gb|ARAV01000021.1| 16774 17418 1 + 645 Predicted dinucleotide-binding enzymes - none -
fig|6666666.65904.peg.314 CDS gi|481785023|gb|ARAV01000021.1| 17420 18478 2 + 1059 putative oxidoreductase protein - none -
fig|6666666.65904.peg.315 CDS gi|481785023|gb|ARAV01000021.1| 19982 18483 -2 - 1500 sugar kinase - none -
fig|6666666.65904.peg.316 CDS gi|481785023|gb|ARAV01000021.1| 20142 21413 3 + 1272 hypothetical protein - none -
fig|6666666.65904.peg.317 CDS gi|481785023|gb|ARAV01000021.1| 21749 21387 -2 - 363 hypothetical membrane protein - none -
fig|6666666.65904.peg.318 CDS gi|481785023|gb|ARAV01000021.1| 22135 21746 -1 - 390 Inner membrane protein - none -
fig|6666666.65904.peg.319 CDS gi|481785023|gb|ARAV01000021.1| 22726 22154 -1 - 573 hypothetical protein - none -
fig|6666666.65904.peg.320 CDS gi|481785023|gb|ARAV01000021.1| 22789 23739 1 + 951 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.321 CDS gi|481785023|gb|ARAV01000021.1| 23740 24639 1 + 900 hypothetical protein - none -
fig|6666666.65904.peg.322 CDS gi|481785023|gb|ARAV01000021.1| 27567 24739 -3 - 2829 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65904.peg.323 CDS gi|481785023|gb|ARAV01000021.1| 28511 27636 -2 - 876 hypothetical protein - none -
fig|6666666.65904.peg.324 CDS gi|481785023|gb|ARAV01000021.1| 28680 29312 3 + 633 hypothetical protein - none -
fig|6666666.65904.peg.325 CDS gi|481785023|gb|ARAV01000021.1| 29433 29888 3 + 456 hypothetical protein - none -
fig|6666666.65904.peg.326 CDS gi|481785023|gb|ARAV01000021.1| 31112 29889 -2 - 1224 hypothetical protein - none -
fig|6666666.65904.peg.327 CDS gi|481785023|gb|ARAV01000021.1| 31569 31321 -3 - 249 hypothetical protein - none -
fig|6666666.65904.peg.328 CDS gi|481785023|gb|ARAV01000021.1| 31597 32166 1 + 570 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65904.peg.329 CDS gi|481785023|gb|ARAV01000021.1| 32302 32526 1 + 225 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65904.peg.330 CDS gi|481785023|gb|ARAV01000021.1| 33620 32523 -2 - 1098 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis);
Zinc regulated enzymes
fig|6666666.65904.peg.331 CDS gi|481785023|gb|ARAV01000021.1| 33989 34150 2 + 162 hypothetical protein - none -
fig|6666666.65904.peg.332 CDS gi|481785023|gb|ARAV01000021.1| 34189 35151 1 + 963 hypothetical protein - none -
fig|6666666.65904.peg.333 CDS gi|481785028|gb|ARAV01000020.1| 1038 1625 3 + 588 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65904.peg.334 CDS gi|481785028|gb|ARAV01000020.1| 1654 2391 1 + 738 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65904.peg.335 CDS gi|481785028|gb|ARAV01000020.1| 3370 2486 -1 - 885 FIG00544174: hypothetical protein - none -
fig|6666666.65904.peg.336 CDS gi|481785028|gb|ARAV01000020.1| 3375 3530 3 + 156 hypothetical protein - none -
fig|6666666.65904.peg.337 CDS gi|481785028|gb|ARAV01000020.1| 3939 3553 -3 - 387 Thioredoxin - none -
fig|6666666.65904.peg.338 CDS gi|481785028|gb|ARAV01000020.1| 4042 4245 1 + 204 copper chaperone - none -
fig|6666666.65904.peg.339 CDS gi|481785028|gb|ARAV01000020.1| 4417 5319 1 + 903 hypothetical protein - none -
fig|6666666.65904.peg.340 CDS gi|481785028|gb|ARAV01000020.1| 5322 5657 3 + 336 hypothetical protein - none -
fig|6666666.65904.peg.341 CDS gi|481785028|gb|ARAV01000020.1| 5662 6144 1 + 483 hypothetical protein - none -
fig|6666666.65904.peg.342 CDS gi|481785028|gb|ARAV01000020.1| 6205 6405 1 + 201 Copper chaperone Copper homeostasis
fig|6666666.65904.peg.343 CDS gi|481785028|gb|ARAV01000020.1| 6513 8795 3 + 2283 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65904.peg.344 CDS gi|481785028|gb|ARAV01000020.1| 8875 10203 1 + 1329 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.65904.peg.345 CDS gi|481785028|gb|ARAV01000020.1| 10502 10305 -2 - 198 hypothetical protein - none -
fig|6666666.65904.peg.346 CDS gi|481785028|gb|ARAV01000020.1| 12181 10709 -1 - 1473 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65904.peg.347 CDS gi|481785028|gb|ARAV01000020.1| 13016 13324 2 + 309 putative ABC transporter - none -
fig|6666666.65904.peg.348 CDS gi|481785028|gb|ARAV01000020.1| 13727 14047 2 + 321 putative ABC transporter - none -
fig|6666666.65904.peg.349 CDS gi|481785028|gb|ARAV01000020.1| 14609 14157 -2 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65904.peg.350 CDS gi|481785028|gb|ARAV01000020.1| 15306 14656 -3 - 651 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65904.peg.351 CDS gi|481785028|gb|ARAV01000020.1| 15701 15405 -2 - 297 SSU ribosomal protein S6p - none -
fig|6666666.65904.peg.352 CDS gi|481785028|gb|ARAV01000020.1| 16028 15828 -2 - 201 hypothetical protein - none -
fig|6666666.65904.peg.353 CDS gi|481785028|gb|ARAV01000020.1| 17500 16031 -1 - 1470 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65904.peg.354 CDS gi|481785028|gb|ARAV01000020.1| 19770 17509 -3 - 2262 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65904.peg.355 CDS gi|481785028|gb|ARAV01000020.1| 20283 19990 -3 - 294 FIG00544267: hypothetical protein - none -
fig|6666666.65904.peg.356 CDS gi|481785028|gb|ARAV01000020.1| 20617 20474 -1 - 144 hypothetical protein - none -
fig|6666666.65904.peg.357 CDS gi|481785028|gb|ARAV01000020.1| 20591 21562 2 + 972 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.65904.peg.358 CDS gi|481785028|gb|ARAV01000020.1| 21680 22093 2 + 414 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.359 CDS gi|481785028|gb|ARAV01000020.1| 22151 23125 2 + 975 Universal stress protein family - none -
fig|6666666.65904.peg.360 CDS gi|481785028|gb|ARAV01000020.1| 23136 23606 3 + 471 hypothetical membrane protein - none -
fig|6666666.65904.peg.361 CDS gi|481785028|gb|ARAV01000020.1| 24527 23616 -2 - 912 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65904.peg.362 CDS gi|481785028|gb|ARAV01000020.1| 24665 25705 2 + 1041 putative oxidoreductase protein - none -
fig|6666666.65904.peg.363 CDS gi|481785028|gb|ARAV01000020.1| 26066 25728 -2 - 339 hypothetical protein - none -
fig|6666666.65904.peg.364 CDS gi|481785028|gb|ARAV01000020.1| 27574 26081 -1 - 1494 ATP-dependent Zn protease - none -
fig|6666666.65904.peg.365 CDS gi|481785028|gb|ARAV01000020.1| 29897 27693 -2 - 2205 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.65904.peg.366 CDS gi|481785028|gb|ARAV01000020.1| 30339 30079 -3 - 261 hypothetical protein - none -
fig|6666666.65904.peg.367 CDS gi|481785028|gb|ARAV01000020.1| 30373 31668 1 + 1296 Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30) Glyoxylate bypass;
Glyoxylate bypass cluster;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle
fig|6666666.65904.peg.368 CDS gi|481785028|gb|ARAV01000020.1| 31806 32312 3 + 507 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.65904.peg.369 CDS gi|481785028|gb|ARAV01000020.1| 32343 33155 3 + 813 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65904.peg.370 CDS gi|481785028|gb|ARAV01000020.1| 33416 33165 -2 - 252 hypothetical protein - none -
fig|6666666.65904.peg.371 CDS gi|481785028|gb|ARAV01000020.1| 33480 35042 3 + 1563 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65904.peg.372 CDS gi|481785028|gb|ARAV01000020.1| 35560 35021 -1 - 540 hypothetical protein - none -
fig|6666666.65904.peg.373 CDS gi|481785028|gb|ARAV01000020.1| 36658 35804 -1 - 855 hypothetical protein - none -
fig|6666666.65904.peg.374 CDS gi|481785033|gb|ARAV01000019.1| 1045 53 -1 - 993 Phage portal protein # Pham3 Phage packaging machinery
fig|6666666.65904.peg.375 CDS gi|481785033|gb|ARAV01000019.1| 2605 1100 -1 - 1506 hypothetical protein - none -
fig|6666666.65904.peg.376 CDS gi|481785033|gb|ARAV01000019.1| 3090 2605 -3 - 486 hypothetical protein - none -
fig|6666666.65904.peg.377 CDS gi|481785033|gb|ARAV01000019.1| 5677 5480 -1 - 198 hypothetical protein - none -
fig|6666666.65904.peg.378 CDS gi|481785033|gb|ARAV01000019.1| 6038 5688 -2 - 351 Phage protein - none -
fig|6666666.65904.peg.379 CDS gi|481785033|gb|ARAV01000019.1| 6198 6013 -3 - 186 hypothetical protein - none -
fig|6666666.65904.peg.380 CDS gi|481785033|gb|ARAV01000019.1| 6443 6195 -2 - 249 hypothetical protein - none -
fig|6666666.65904.peg.381 CDS gi|481785033|gb|ARAV01000019.1| 6724 6554 -1 - 171 hypothetical protein - none -
fig|6666666.65904.peg.382 CDS gi|481785033|gb|ARAV01000019.1| 7479 6724 -3 - 756 hypothetical protein - none -
fig|6666666.65904.peg.383 CDS gi|481785033|gb|ARAV01000019.1| 7774 7646 -1 - 129 hypothetical protein - none -
fig|6666666.65904.peg.384 CDS gi|481785033|gb|ARAV01000019.1| 8552 8289 -2 - 264 hypothetical protein - none -
fig|6666666.65904.peg.385 CDS gi|481785033|gb|ARAV01000019.1| 9120 8698 -3 - 423 hypothetical protein - none -
fig|6666666.65904.peg.386 CDS gi|481785033|gb|ARAV01000019.1| 10026 9121 -3 - 906 hypothetical protein - none -
fig|6666666.65904.peg.387 CDS gi|481785033|gb|ARAV01000019.1| 10323 10039 -3 - 285 hypothetical protein - none -
fig|6666666.65904.peg.388 CDS gi|481785033|gb|ARAV01000019.1| 10535 10320 -2 - 216 hypothetical protein - none -
fig|6666666.65904.peg.389 CDS gi|481785033|gb|ARAV01000019.1| 10785 10528 -3 - 258 hypothetical protein - none -
fig|6666666.65904.peg.390 CDS gi|481785033|gb|ARAV01000019.1| 11044 10775 -1 - 270 hypothetical protein - none -
fig|6666666.65904.peg.391 CDS gi|481785033|gb|ARAV01000019.1| 12031 11054 -1 - 978 Phage-related protein - none -
fig|6666666.65904.peg.392 CDS gi|481785033|gb|ARAV01000019.1| 12206 12024 -2 - 183 hypothetical protein - none -
fig|6666666.65904.peg.393 CDS gi|481785033|gb|ARAV01000019.1| 12387 12196 -3 - 192 hypothetical protein - none -
fig|6666666.65904.peg.394 CDS gi|481785033|gb|ARAV01000019.1| 12530 12384 -2 - 147 hypothetical protein - none -
fig|6666666.65904.peg.395 CDS gi|481785033|gb|ARAV01000019.1| 12699 12511 -3 - 189 hypothetical protein - none -
fig|6666666.65904.peg.396 CDS gi|481785033|gb|ARAV01000019.1| 13063 12683 -1 - 381 hypothetical protein - none -
fig|6666666.65904.peg.397 CDS gi|481785033|gb|ARAV01000019.1| 13412 13230 -2 - 183 hypothetical protein - none -
fig|6666666.65904.peg.398 CDS gi|481785033|gb|ARAV01000019.1| 13585 13409 -1 - 177 hypothetical protein - none -
fig|6666666.65904.peg.399 CDS gi|481785033|gb|ARAV01000019.1| 15019 14189 -1 - 831 hypothetical protein - none -
fig|6666666.65904.peg.400 CDS gi|481785033|gb|ARAV01000019.1| 15773 15033 -2 - 741 hypothetical protein - none -
fig|6666666.65904.peg.401 CDS gi|481785033|gb|ARAV01000019.1| 16099 15896 -1 - 204 hypothetical protein - none -
fig|6666666.65904.peg.402 CDS gi|481785033|gb|ARAV01000019.1| 16295 16786 2 + 492 hypothetical protein - none -
fig|6666666.65904.peg.403 CDS gi|481785033|gb|ARAV01000019.1| 17284 17640 1 + 357 hypothetical protein - none -
fig|6666666.65904.peg.404 CDS gi|481785033|gb|ARAV01000019.1| 17714 18862 2 + 1149 Integrase - none -
fig|6666666.65904.peg.405 CDS gi|481785033|gb|ARAV01000019.1| 19440 19036 -3 - 405 FIG00544601: hypothetical protein - none -
fig|6666666.65904.peg.406 CDS gi|481785033|gb|ARAV01000019.1| 19719 22448 3 + 2730 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.407 CDS gi|481785033|gb|ARAV01000019.1| 22754 22608 -2 - 147 hypothetical protein - none -
fig|6666666.65904.peg.408 CDS gi|481785033|gb|ARAV01000019.1| 22964 23575 2 + 612 DUF1541 domain-containing protein - none -
fig|6666666.65904.peg.409 CDS gi|481785033|gb|ARAV01000019.1| 24209 23559 -2 - 651 possible secreted peptidase - none -
fig|6666666.65904.peg.410 CDS gi|481785033|gb|ARAV01000019.1| 25195 24212 -1 - 984 putative hydrolase - none -
fig|6666666.65904.peg.411 CDS gi|481785033|gb|ARAV01000019.1| 25344 26846 3 + 1503 Sodium/di- and tricarboxylate cotransporter - none -
fig|6666666.65904.peg.412 CDS gi|481785033|gb|ARAV01000019.1| 26880 27191 3 + 312 hypothetical protein - none -
fig|6666666.65904.peg.413 CDS gi|481785033|gb|ARAV01000019.1| 27211 28011 1 + 801 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.65904.peg.414 CDS gi|481785033|gb|ARAV01000019.1| 29007 28012 -3 - 996 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65904.peg.415 CDS gi|481785033|gb|ARAV01000019.1| 29107 29706 1 + 600 Acetyltransferase - none -
fig|6666666.65904.peg.416 CDS gi|481785033|gb|ARAV01000019.1| 30050 29703 -2 - 348 hypothetical protein - none -
fig|6666666.65904.peg.417 CDS gi|481785033|gb|ARAV01000019.1| 31218 30256 -3 - 963 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65904.peg.418 CDS gi|481785033|gb|ARAV01000019.1| 31516 31211 -1 - 306 putative transport protein - none -
fig|6666666.65904.peg.419 CDS gi|481785033|gb|ARAV01000019.1| 32674 31535 -1 - 1140 putative transport protein - none -
fig|6666666.65904.peg.420 CDS gi|481785033|gb|ARAV01000019.1| 33590 32763 -2 - 828 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65904.peg.421 CDS gi|481785033|gb|ARAV01000019.1| 34549 33602 -1 - 948 hypothetical protein - none -
fig|6666666.65904.peg.422 CDS gi|481785033|gb|ARAV01000019.1| 34706 34572 -2 - 135 hypothetical protein - none -
fig|6666666.65904.peg.423 CDS gi|481785033|gb|ARAV01000019.1| 35561 34839 -2 - 723 hypothetical protein - none -
fig|6666666.65904.peg.424 CDS gi|481785033|gb|ARAV01000019.1| 37174 35690 -1 - 1485 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.65904.peg.425 CDS gi|481785033|gb|ARAV01000019.1| 37241 37891 2 + 651 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65904.peg.426 CDS gi|481785033|gb|ARAV01000019.1| 38248 37898 -1 - 351 hypothetical protein - none -
fig|6666666.65904.peg.427 CDS gi|481785033|gb|ARAV01000019.1| 39242 39538 2 + 297 hypothetical protein - none -
fig|6666666.65904.peg.428 CDS gi|481785033|gb|ARAV01000019.1| 39686 41929 2 + 2244 hypothetical protein - none -
fig|6666666.65904.peg.429 CDS gi|481785033|gb|ARAV01000019.1| 42110 41970 -2 - 141 putative non-ribosomal peptide synthetase - none -
fig|6666666.65904.peg.430 CDS gi|481785033|gb|ARAV01000019.1| 42282 42082 -3 - 201 Mobile element protein - none -
fig|6666666.65904.peg.431 CDS gi|481785036|gb|ARAV01000018.1| 733 602 -1 - 132 hypothetical protein - none -
fig|6666666.65904.peg.432 CDS gi|481785036|gb|ARAV01000018.1| 960 2855 3 + 1896 (MTV035.06c), len: 957. Member of M. tuberculosis Gly-, Ala-rich PGRS subfamily of PE protein family.Similar tomany others. Contains PS00583 pfkB family of carbohydrate kinases signature 1. FASTA scores: Z95890|MTCY28_25 (914 aa) opt: 3849 z-score: 2368.8 E(): 0; 67.8% identity in 903 aa overlap. TBparse score is 0.870 - none -
fig|6666666.65904.peg.433 CDS gi|481785036|gb|ARAV01000018.1| 3776 2865 -2 - 912 PQQ-dependent oxidoreductase, gdhB family - none -
fig|6666666.65904.peg.434 CDS gi|481785036|gb|ARAV01000018.1| 4232 5518 2 + 1287 Putative secreted protein - none -
fig|6666666.65904.peg.435 CDS gi|481785036|gb|ARAV01000018.1| 5745 6029 3 + 285 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.65904.peg.436 CDS gi|481785036|gb|ARAV01000018.1| 6282 6683 3 + 402 hypothetical protein - none -
fig|6666666.65904.peg.437 CDS gi|481785036|gb|ARAV01000018.1| 6838 7428 1 + 591 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.438 CDS gi|481785036|gb|ARAV01000018.1| 7948 7436 -1 - 513 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65904.peg.439 CDS gi|481785036|gb|ARAV01000018.1| 9271 8015 -1 - 1257 hypothetical protein - none -
fig|6666666.65904.peg.440 CDS gi|481785036|gb|ARAV01000018.1| 10001 9300 -2 - 702 FIG00549881: hypothetical protein - none -
fig|6666666.65904.peg.441 CDS gi|481785036|gb|ARAV01000018.1| 10623 10003 -3 - 621 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.65904.peg.442 CDS gi|481785036|gb|ARAV01000018.1| 10658 12046 2 + 1389 Magnesium chelatase, subunit ChlI (EC 6.6.1.1) CBSS-336982.3.peg.1011
fig|6666666.65904.peg.443 CDS gi|481785036|gb|ARAV01000018.1| 12067 14025 1 + 1959 FIG019045: long form Mg-chelase associated protein with vWA domain CBSS-336982.3.peg.1011
fig|6666666.65904.peg.444 CDS gi|481785036|gb|ARAV01000018.1| 14033 14509 2 + 477 hypothetical protein - none -
fig|6666666.65904.peg.445 CDS gi|481785036|gb|ARAV01000018.1| 16195 14516 -1 - 1680 Ubiquinone biosynthesis monooxygenase UbiB - none -
fig|6666666.65904.peg.446 CDS gi|481785036|gb|ARAV01000018.1| 16238 17026 2 + 789 putative spermidine synthase - none -
fig|6666666.65904.peg.447 CDS gi|481785036|gb|ARAV01000018.1| 17517 17023 -3 - 495 hypothetical protein - none -
fig|6666666.65904.peg.448 CDS gi|481785036|gb|ARAV01000018.1| 18168 17560 -3 - 609 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65904.peg.449 CDS gi|481785036|gb|ARAV01000018.1| 18631 18158 -1 - 474 RNA polymerase, sigma-24 subunit, ECF subfamily - none -
fig|6666666.65904.peg.450 CDS gi|481785036|gb|ARAV01000018.1| 18720 19091 3 + 372 hypothetical protein - none -
fig|6666666.65904.peg.451 CDS gi|481785036|gb|ARAV01000018.1| 19224 19111 -3 - 114 hypothetical protein - none -
fig|6666666.65904.peg.452 CDS gi|481785036|gb|ARAV01000018.1| 19580 19227 -2 - 354 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65904.peg.453 CDS gi|481785036|gb|ARAV01000018.1| 20352 19711 -3 - 642 hypothetical protein - none -
fig|6666666.65904.peg.454 CDS gi|481785036|gb|ARAV01000018.1| 20438 21307 2 + 870 hypothetical protein - none -
fig|6666666.65904.peg.455 CDS gi|481785036|gb|ARAV01000018.1| 21304 21741 1 + 438 putative membrane protein - none -
fig|6666666.65904.peg.456 CDS gi|481785036|gb|ARAV01000018.1| 22562 21738 -2 - 825 hypothetical protein - none -
fig|6666666.65904.peg.457 CDS gi|481785036|gb|ARAV01000018.1| 23224 22649 -1 - 576 hypothetical protein - none -
fig|6666666.65904.peg.458 CDS gi|481785036|gb|ARAV01000018.1| 23738 24244 2 + 507 Transcriptional regulator, GntR family - none -
fig|6666666.65904.peg.459 CDS gi|481785036|gb|ARAV01000018.1| 24510 25457 3 + 948 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65904.peg.460 CDS gi|481785036|gb|ARAV01000018.1| 25470 26423 3 + 954 phosphotriesterase - none -
fig|6666666.65904.peg.461 CDS gi|481785036|gb|ARAV01000018.1| 26435 27562 2 + 1128 Salicylate hydroxylase (EC 1.14.13.1) Salicylate and gentisate catabolism;
Salicylate ester degradation
fig|6666666.65904.peg.462 CDS gi|481785036|gb|ARAV01000018.1| 27597 28529 3 + 933 Esterase/lipase - none -
fig|6666666.65904.peg.463 CDS gi|481785036|gb|ARAV01000018.1| 28618 29988 1 + 1371 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65904.peg.464 CDS gi|481785036|gb|ARAV01000018.1| 30189 31385 3 + 1197 hypothetical protein - none -
fig|6666666.65904.peg.465 CDS gi|481785036|gb|ARAV01000018.1| 32381 31458 -2 - 924 beta-lactamase-like protein - none -
fig|6666666.65904.peg.466 CDS gi|481785036|gb|ARAV01000018.1| 32547 34277 3 + 1731 FIG01132288: hypothetical protein - none -
fig|6666666.65904.peg.467 CDS gi|481785036|gb|ARAV01000018.1| 35010 35930 3 + 921 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65904.peg.468 CDS gi|481785036|gb|ARAV01000018.1| 35927 37525 2 + 1599 hypothetical protein - none -
fig|6666666.65904.peg.469 CDS gi|481785036|gb|ARAV01000018.1| 38102 37530 -2 - 573 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.470 CDS gi|481785036|gb|ARAV01000018.1| 38206 40377 1 + 2172 FIG00545392: hypothetical protein - none -
fig|6666666.65904.peg.471 CDS gi|481785036|gb|ARAV01000018.1| 40983 40558 -3 - 426 hypothetical protein - none -
fig|6666666.65904.peg.472 CDS gi|481785036|gb|ARAV01000018.1| 41625 41185 -3 - 441 FIG00544626: hypothetical protein - none -
fig|6666666.65904.peg.473 CDS gi|481785036|gb|ARAV01000018.1| 41730 42296 3 + 567 hypothetical protein - none -
fig|6666666.65904.peg.474 CDS gi|481785036|gb|ARAV01000018.1| 42352 42744 1 + 393 hypothetical protein - none -
fig|6666666.65904.peg.475 CDS gi|481785036|gb|ARAV01000018.1| 43727 42786 -2 - 942 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65904.peg.476 CDS gi|481785036|gb|ARAV01000018.1| 43746 45344 3 + 1599 Mobile element protein - none -
fig|6666666.65904.peg.477 CDS gi|481785036|gb|ARAV01000018.1| 45348 46118 3 + 771 Mobile element protein - none -
fig|6666666.65904.peg.478 CDS gi|481785036|gb|ARAV01000018.1| 46291 46614 1 + 324 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.479 CDS gi|481785036|gb|ARAV01000018.1| 46711 47274 1 + 564 hypothetical protein - none -
fig|6666666.65904.peg.480 CDS gi|481785036|gb|ARAV01000018.1| 48120 47254 -3 - 867 Acyl-CoA thioesterase 1 - none -
fig|6666666.65904.peg.481 CDS gi|481785036|gb|ARAV01000018.1| 48292 48092 -1 - 201 Mobile element protein - none -
fig|6666666.65904.peg.482 CDS gi|481785038|gb|ARAV01000017.1| 1446 1126 -3 - 321 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Iron-sulfur cluster assembly;
Soluble cytochromes and functionally related electron carriers
fig|6666666.65904.peg.483 CDS gi|481785038|gb|ARAV01000017.1| 2246 1500 -2 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.484 CDS gi|481785038|gb|ARAV01000017.1| 4079 2250 -2 - 1830 Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, C-terminal domain Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.485 CDS gi|481785038|gb|ARAV01000017.1| 5217 4120 -3 - 1098 Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, N-terminal domain Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.486 CDS gi|481785038|gb|ARAV01000017.1| 6562 5282 -1 - 1281 putative cytochrome P450 hydroxylase - none -
fig|6666666.65904.peg.487 CDS gi|481785038|gb|ARAV01000017.1| 6979 6749 -1 - 231 hypothetical protein - none -
fig|6666666.65904.peg.488 CDS gi|481785038|gb|ARAV01000017.1| 8332 7568 -1 - 765 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.489 CDS gi|481785038|gb|ARAV01000017.1| 9558 8335 -3 - 1224 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.65904.peg.490 CDS gi|481785038|gb|ARAV01000017.1| 10378 9608 -1 - 771 Pca regulon regulatory protein PcaR Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.491 CDS gi|481785038|gb|ARAV01000017.1| 10492 11235 1 + 744 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.492 CDS gi|481785038|gb|ARAV01000017.1| 11256 11882 3 + 627 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.65904.peg.493 CDS gi|481785038|gb|ARAV01000017.1| 12085 13362 1 + 1278 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65904.peg.494 CDS gi|481785038|gb|ARAV01000017.1| 14123 13359 -2 - 765 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.495 CDS gi|481785038|gb|ARAV01000017.1| 14450 15448 2 + 999 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65904.peg.496 CDS gi|481785038|gb|ARAV01000017.1| 15492 16967 3 + 1476 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65904.peg.497 CDS gi|481785038|gb|ARAV01000017.1| 16993 19671 1 + 2679 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65904.peg.498 CDS gi|481785038|gb|ARAV01000017.1| 19672 21297 1 + 1626 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65904.peg.499 CDS gi|481785038|gb|ARAV01000017.1| 21298 21747 1 + 450 Putative membrane protein - none -
fig|6666666.65904.peg.500 CDS gi|481785038|gb|ARAV01000017.1| 21769 22635 1 + 867 Ribosomal protein S6 glutaminyl transferase - none -
fig|6666666.65904.peg.501 CDS gi|481785038|gb|ARAV01000017.1| 22628 23422 2 + 795 Ribosomal protein S6 glutaminyl transferase - none -
fig|6666666.65904.peg.502 CDS gi|481785038|gb|ARAV01000017.1| 23460 23771 3 + 312 hypothetical protein - none -
fig|6666666.65904.peg.503 CDS gi|481785038|gb|ARAV01000017.1| 23819 24229 2 + 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.65904.peg.504 CDS gi|481785038|gb|ARAV01000017.1| 24635 24330 -2 - 306 hypothetical protein - none -
fig|6666666.65904.peg.505 CDS gi|481785038|gb|ARAV01000017.1| 26243 24720 -2 - 1524 hypothetical protein - none -
fig|6666666.65904.peg.506 CDS gi|481785038|gb|ARAV01000017.1| 26498 28204 2 + 1707 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65904.peg.507 CDS gi|481785038|gb|ARAV01000017.1| 28455 31685 3 + 3231 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.65904.peg.508 CDS gi|481785038|gb|ARAV01000017.1| 31877 32182 2 + 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65904.peg.509 CDS gi|481785038|gb|ARAV01000017.1| 32214 32492 3 + 279 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65904.peg.510 CDS gi|481785038|gb|ARAV01000017.1| 33311 32583 -2 - 729 hypothetical protein - none -
fig|6666666.65904.peg.511 CDS gi|481785038|gb|ARAV01000017.1| 33488 34987 2 + 1500 COG0536: GTP-binding protein Obg - none -
fig|6666666.65904.peg.512 CDS gi|481785038|gb|ARAV01000017.1| 35011 36174 1 + 1164 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.65904.peg.513 CDS gi|481785038|gb|ARAV01000017.1| 36177 37097 3 + 921 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.514 CDS gi|481785038|gb|ARAV01000017.1| 37115 38026 2 + 912 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.515 CDS gi|481785038|gb|ARAV01000017.1| 38026 38934 1 + 909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.516 CDS gi|481785038|gb|ARAV01000017.1| 38955 40244 3 + 1290 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65904.peg.517 CDS gi|481785038|gb|ARAV01000017.1| 40348 41277 1 + 930 hypothetical protein - none -
fig|6666666.65904.peg.518 CDS gi|481785038|gb|ARAV01000017.1| 41345 41917 2 + 573 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65904.peg.519 CDS gi|481785038|gb|ARAV01000017.1| 42095 42568 2 + 474 Iojap protein - none -
fig|6666666.65904.peg.520 CDS gi|481785038|gb|ARAV01000017.1| 42680 43288 2 + 609 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.65904.peg.521 CDS gi|481785038|gb|ARAV01000017.1| 43276 44100 1 + 825 Hypothetical protein DUF194, DegV family - none -
fig|6666666.65904.peg.522 CDS gi|481785038|gb|ARAV01000017.1| 44182 44865 1 + 684 FIG00545717: hypothetical protein - none -
fig|6666666.65904.peg.523 CDS gi|481785038|gb|ARAV01000017.1| 45054 44866 -3 - 189 hypothetical protein - none -
fig|6666666.65904.peg.524 CDS gi|481785038|gb|ARAV01000017.1| 45279 46919 3 + 1641 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.65904.peg.525 CDS gi|481785038|gb|ARAV01000017.1| 47942 46926 -2 - 1017 hypothetical protein - none -
fig|6666666.65904.peg.526 CDS gi|481785038|gb|ARAV01000017.1| 48089 49015 2 + 927 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65904.peg.527 CDS gi|481785038|gb|ARAV01000017.1| 49030 49422 1 + 393 ankyrin repeat containing protein - none -
fig|6666666.65904.peg.528 CDS gi|481785038|gb|ARAV01000017.1| 49419 50072 3 + 654 Threonine efflux protein - none -
fig|6666666.65904.peg.529 CDS gi|481785038|gb|ARAV01000017.1| 50963 50073 -2 - 891 hypothetical protein - none -
fig|6666666.65904.peg.530 CDS gi|481785038|gb|ARAV01000017.1| 51306 51043 -3 - 264 SSU ribosomal protein S20p - none -
fig|6666666.65904.peg.531 CDS gi|481785038|gb|ARAV01000017.1| 52351 51470 -1 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.65904.peg.532 CDS gi|481785038|gb|ARAV01000017.1| 52440 53090 3 + 651 Thioredoxin - none -
fig|6666666.65904.peg.533 CDS gi|481785038|gb|ARAV01000017.1| 53698 53087 -1 - 612 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65904.peg.534 CDS gi|481785038|gb|ARAV01000017.1| 54024 55880 3 + 1857 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65904.peg.535 CDS gi|481785038|gb|ARAV01000017.1| 56796 55897 -3 - 900 Mobile element protein - none -
fig|6666666.65904.peg.536 CDS gi|481785038|gb|ARAV01000017.1| 56773 58035 1 + 1263 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.65904.peg.537 CDS gi|481785038|gb|ARAV01000017.1| 58460 58245 -2 - 216 Mobile element protein - none -
fig|6666666.65904.peg.538 CDS gi|481785041|gb|ARAV01000016.1| 1650 379 -3 - 1272 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65904.peg.539 CDS gi|481785041|gb|ARAV01000016.1| 1866 1687 -3 - 180 UPF0434 protein YcaR - none -
fig|6666666.65904.peg.540 CDS gi|481785041|gb|ARAV01000016.1| 2519 1878 -2 - 642 hypothetical protein - none -
fig|6666666.65904.peg.541 CDS gi|481785041|gb|ARAV01000016.1| 4080 2506 -3 - 1575 FIG00543839: hypothetical protein - none -
fig|6666666.65904.peg.542 CDS gi|481785041|gb|ARAV01000016.1| 5174 4080 -2 - 1095 FIG00547275: hypothetical protein - none -
fig|6666666.65904.peg.543 CDS gi|481785041|gb|ARAV01000016.1| 6751 5318 -1 - 1434 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65904.peg.544 CDS gi|481785041|gb|ARAV01000016.1| 7956 6751 -3 - 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65904.peg.545 CDS gi|481785041|gb|ARAV01000016.1| 8534 8037 -2 - 498 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65904.peg.546 CDS gi|481785041|gb|ARAV01000016.1| 9474 8536 -3 - 939 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65904.peg.547 CDS gi|481785041|gb|ARAV01000016.1| 10655 9477 -2 - 1179 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65904.peg.548 CDS gi|481785041|gb|ARAV01000016.1| 11598 10657 -3 - 942 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65904.peg.549 CDS gi|481785041|gb|ARAV01000016.1| 12769 11609 -1 - 1161 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.65904.peg.550 CDS gi|481785041|gb|ARAV01000016.1| 13843 12800 -1 - 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65904.peg.551 CDS gi|481785041|gb|ARAV01000016.1| 16421 13911 -2 - 2511 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65904.peg.552 CDS gi|481785041|gb|ARAV01000016.1| 17503 16445 -1 - 1059 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65904.peg.553 CDS gi|481785041|gb|ARAV01000016.1| 18402 17566 -3 - 837 FIG011178: rRNA methylase RNA methylation
fig|6666666.65904.peg.554 CDS gi|481785041|gb|ARAV01000016.1| 18969 18583 -3 - 387 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65904.peg.555 CDS gi|481785041|gb|ARAV01000016.1| 19218 19024 -3 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65904.peg.556 CDS gi|481785041|gb|ARAV01000016.1| 19599 19252 -3 - 348 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65904.peg.557 CDS gi|481785041|gb|ARAV01000016.1| 20031 22007 3 + 1977 hypothetical protein - none -
fig|6666666.65904.peg.558 CDS gi|481785041|gb|ARAV01000016.1| 24853 22004 -1 - 2850 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65904.peg.559 CDS gi|481785041|gb|ARAV01000016.1| 24962 25564 2 + 603 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65904.peg.560 CDS gi|481785041|gb|ARAV01000016.1| 25663 26568 1 + 906 FIG00995839: hypothetical protein - none -
fig|6666666.65904.peg.561 CDS gi|481785041|gb|ARAV01000016.1| 26668 28881 1 + 2214 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65904.peg.562 CDS gi|481785041|gb|ARAV01000016.1| 29377 28934 -1 - 444 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65904.peg.563 CDS gi|481785041|gb|ARAV01000016.1| 29837 29484 -2 - 354 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65904.peg.564 CDS gi|481785041|gb|ARAV01000016.1| 32061 29968 -3 - 2094 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65904.peg.565 CDS gi|481785041|gb|ARAV01000016.1| 32490 32104 -3 - 387 hypothetical protein - none -
fig|6666666.65904.peg.566 CDS gi|481785041|gb|ARAV01000016.1| 33110 33448 2 + 339 hypothetical protein - none -
fig|6666666.65904.peg.567 CDS gi|481785041|gb|ARAV01000016.1| 33680 34012 2 + 333 hypothetical protein - none -
fig|6666666.65904.peg.568 CDS gi|481785041|gb|ARAV01000016.1| 34132 37053 1 + 2922 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.65904.peg.569 CDS gi|481785041|gb|ARAV01000016.1| 37085 41698 2 + 4614 Type II restriction enzyme, methylase subunits - none -
fig|6666666.65904.peg.570 CDS gi|481785041|gb|ARAV01000016.1| 41746 48138 1 + 6393 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.65904.peg.571 CDS gi|481785041|gb|ARAV01000016.1| 48160 50511 1 + 2352 putative DNA helicase - none -
fig|6666666.65904.peg.572 CDS gi|481785041|gb|ARAV01000016.1| 51836 50724 -2 - 1113 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.65904.peg.573 CDS gi|481785041|gb|ARAV01000016.1| 52776 51847 -3 - 930 putative oxidoreductase - none -
fig|6666666.65904.peg.574 CDS gi|481785041|gb|ARAV01000016.1| 52878 53369 3 + 492 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.575 CDS gi|481785041|gb|ARAV01000016.1| 53856 53515 -3 - 342 hypothetical protein - none -
fig|6666666.65904.peg.576 CDS gi|481785041|gb|ARAV01000016.1| 54556 53963 -1 - 594 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65904.peg.577 CDS gi|481785041|gb|ARAV01000016.1| 56123 54648 -2 - 1476 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.65904.peg.578 CDS gi|481785041|gb|ARAV01000016.1| 56331 57059 3 + 729 SAM-dependent methyltransferases - none -
fig|6666666.65904.peg.579 CDS gi|481785041|gb|ARAV01000016.1| 58102 57056 -1 - 1047 hypothetical protein - none -
fig|6666666.65904.peg.580 CDS gi|481785041|gb|ARAV01000016.1| 60695 58086 -2 - 2610 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65904.peg.581 CDS gi|481785041|gb|ARAV01000016.1| 61089 61988 3 + 900 Arginase (EC 3.5.3.1) Arginine and Ornithine Degradation
fig|6666666.65904.peg.582 CDS gi|481785041|gb|ARAV01000016.1| 62085 62447 3 + 363 hypothetical protein - none -
fig|6666666.65904.peg.583 CDS gi|481785041|gb|ARAV01000016.1| 62566 63486 1 + 921 Putative membrane protein - none -
fig|6666666.65904.peg.584 CDS gi|481785041|gb|ARAV01000016.1| 63497 63820 2 + 324 hypothetical protein - none -
fig|6666666.65904.peg.585 CDS gi|481785041|gb|ARAV01000016.1| 64001 64894 2 + 894 ABC-type amino acid transport system, secreted component - none -
fig|6666666.65904.peg.586 CDS gi|481785041|gb|ARAV01000016.1| 64894 65835 1 + 942 putative amino acid ABC transporter permease protein - none -
fig|6666666.65904.peg.587 CDS gi|481785041|gb|ARAV01000016.1| 65836 66603 1 + 768 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.588 CDS gi|481785041|gb|ARAV01000016.1| 67376 66630 -2 - 747 FIG00543922: hypothetical protein - none -
fig|6666666.65904.peg.589 CDS gi|481785041|gb|ARAV01000016.1| 67849 67373 -1 - 477 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.65904.peg.590 CDS gi|481785041|gb|ARAV01000016.1| 68433 67846 -3 - 588 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.65904.peg.591 CDS gi|481785041|gb|ARAV01000016.1| 70548 68455 -3 - 2094 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65904.peg.592 CDS gi|481785041|gb|ARAV01000016.1| 72089 70554 -2 - 1536 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.593 CDS gi|481785041|gb|ARAV01000016.1| 72745 72101 -1 - 645 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65904.peg.594 CDS gi|481785041|gb|ARAV01000016.1| 73708 72746 -1 - 963 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65904.peg.595 CDS gi|481785041|gb|ARAV01000016.1| 73743 74678 3 + 936 Putative exported protein - none -
fig|6666666.65904.peg.596 CDS gi|481785044|gb|ARAV01000015.1| 10 210 1 + 201 Mobile element protein - none -
fig|6666666.65904.peg.597 CDS gi|481785044|gb|ARAV01000015.1| 342 653 3 + 312 putative rubredoxin reductase - none -
fig|6666666.65904.peg.598 CDS gi|481785044|gb|ARAV01000015.1| 650 1384 2 + 735 FIG00546671: hypothetical protein - none -
fig|6666666.65904.peg.599 CDS gi|481785044|gb|ARAV01000015.1| 1381 2871 1 + 1491 NAD-dependent aldehyde dehydrogenase - none -
fig|6666666.65904.peg.600 CDS gi|481785044|gb|ARAV01000015.1| 2996 4225 2 + 1230 Benzoate transport protein Benzoate degradation
fig|6666666.65904.peg.601 CDS gi|481785044|gb|ARAV01000015.1| 4559 4269 -2 - 291 hypothetical protein - none -
fig|6666666.65904.peg.602 CDS gi|481785044|gb|ARAV01000015.1| 4588 4977 1 + 390 hypothetical protein - none -
fig|6666666.65904.peg.603 CDS gi|481785044|gb|ARAV01000015.1| 6261 4981 -3 - 1281 permease of the major facilitator superfamily - none -
fig|6666666.65904.peg.604 CDS gi|481785044|gb|ARAV01000015.1| 6510 7844 3 + 1335 putative transport protein - none -
fig|6666666.65904.peg.605 CDS gi|481785044|gb|ARAV01000015.1| 8055 7855 -3 - 201 hypothetical protein - none -
fig|6666666.65904.peg.606 CDS gi|481785044|gb|ARAV01000015.1| 9244 8123 -1 - 1122 Muconate cycloisomerase (EC 5.5.1.1) Catechol branch of beta-ketoadipate pathway;
Muconate lactonizing enzyme family
fig|6666666.65904.peg.607 CDS gi|481785044|gb|ARAV01000015.1| 10200 9331 -3 - 870 Catechol 1,2-dioxygenase (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.65904.peg.608 CDS gi|481785044|gb|ARAV01000015.1| 10751 12271 2 + 1521 Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) Aromatic dioxygenase mess;
Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65904.peg.609 CDS gi|481785044|gb|ARAV01000015.1| 12319 12813 1 + 495 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) Aromatic dioxygenase mess;
Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65904.peg.610 CDS gi|481785044|gb|ARAV01000015.1| 12887 14473 2 + 1587 benzoate dioxygenase, ferredoxin reductase component - none -
fig|6666666.65904.peg.611 CDS gi|481785044|gb|ARAV01000015.1| 14473 15312 1 + 840 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) Benzoate degradation
fig|6666666.65904.peg.612 CDS gi|481785044|gb|ARAV01000015.1| 15370 17943 1 + 2574 putative transcriptional regulator - none -
fig|6666666.65904.peg.613 CDS gi|481785044|gb|ARAV01000015.1| 18009 20276 3 + 2268 hypothetical protein - none -
fig|6666666.65904.peg.614 CDS gi|481785044|gb|ARAV01000015.1| 21730 20432 -1 - 1299 4-hydroxybenzoate transporter Gentisate degradation;
Salicylate and gentisate catabolism;
p-Hydroxybenzoate degradation
fig|6666666.65904.peg.615 CDS gi|481785044|gb|ARAV01000015.1| 22965 21766 -3 - 1200 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) p-Hydroxybenzoate degradation
fig|6666666.65904.peg.616 CDS gi|481785044|gb|ARAV01000015.1| 23371 22967 -1 - 405 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.617 CDS gi|481785044|gb|ARAV01000015.1| 24474 23371 -3 - 1104 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.618 CDS gi|481785044|gb|ARAV01000015.1| 25104 24508 -3 - 597 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.619 CDS gi|481785044|gb|ARAV01000015.1| 25846 25133 -1 - 714 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.620 CDS gi|481785044|gb|ARAV01000015.1| 26483 26016 -2 - 468 FIG00546761: hypothetical protein - none -
fig|6666666.65904.peg.621 CDS gi|481785044|gb|ARAV01000015.1| 28119 26653 -3 - 1467 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.622 CDS gi|481785044|gb|ARAV01000015.1| 29715 28261 -3 - 1455 Lignostilbene-alpha,beta-dioxygenase and related enzymes - none -
fig|6666666.65904.peg.623 CDS gi|481785044|gb|ARAV01000015.1| 31291 29747 -1 - 1545 FAD/FMN-containing dehydrogenases - none -
fig|6666666.65904.peg.624 CDS gi|481785044|gb|ARAV01000015.1| 32735 31425 -2 - 1311 hypothetical protein - none -
fig|6666666.65904.peg.625 CDS gi|481785044|gb|ARAV01000015.1| 33188 35671 2 + 2484 hypothetical protein - none -
fig|6666666.65904.peg.626 CDS gi|481785044|gb|ARAV01000015.1| 36447 35827 -3 - 621 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65904.peg.627 CDS gi|481785044|gb|ARAV01000015.1| 37139 36471 -2 - 669 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65904.peg.628 CDS gi|481785044|gb|ARAV01000015.1| 37754 37173 -2 - 582 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.629 CDS gi|481785044|gb|ARAV01000015.1| 37901 39085 2 + 1185 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.65904.peg.630 CDS gi|481785044|gb|ARAV01000015.1| 39470 39090 -2 - 381 probable tautomerase - none -
fig|6666666.65904.peg.631 CDS gi|481785044|gb|ARAV01000015.1| 40494 39481 -3 - 1014 Putative membrane protein YeiH - none -
fig|6666666.65904.peg.632 CDS gi|481785044|gb|ARAV01000015.1| 40611 41495 3 + 885 Transcriptional regulator, LysR family CBSS-349102.4.peg.3442
fig|6666666.65904.peg.633 CDS gi|481785044|gb|ARAV01000015.1| 43768 41519 -1 - 2250 Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.65904.peg.634 CDS gi|481785044|gb|ARAV01000015.1| 44943 43771 -3 - 1173 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65904.peg.635 CDS gi|481785044|gb|ARAV01000015.1| 46559 45171 -2 - 1389 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65904.peg.636 CDS gi|481785044|gb|ARAV01000015.1| 47891 47103 -2 - 789 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.637 CDS gi|481785044|gb|ARAV01000015.1| 48260 47964 -2 - 297 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65904.peg.638 CDS gi|481785044|gb|ARAV01000015.1| 48730 49512 1 + 783 FIG00997919: hypothetical protein - none -
fig|6666666.65904.peg.639 CDS gi|481785044|gb|ARAV01000015.1| 49609 50160 1 + 552 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65904.peg.640 CDS gi|481785044|gb|ARAV01000015.1| 50314 50433 1 + 120 hypothetical protein - none -
fig|6666666.65904.peg.641 CDS gi|481785044|gb|ARAV01000015.1| 50961 50488 -3 - 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65904.peg.642 CDS gi|481785044|gb|ARAV01000015.1| 51637 51023 -1 - 615 FIG00544229: hypothetical protein - none -
fig|6666666.65904.peg.643 CDS gi|481785044|gb|ARAV01000015.1| 51798 54203 3 + 2406 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65904.peg.644 CDS gi|481785044|gb|ARAV01000015.1| 54284 54694 2 + 411 hypothetical protein - none -
fig|6666666.65904.peg.645 CDS gi|481785044|gb|ARAV01000015.1| 54774 56108 3 + 1335 two component sensor kinase - none -
fig|6666666.65904.peg.646 CDS gi|481785044|gb|ARAV01000015.1| 56105 56758 2 + 654 two-component system, response regulator - none -
fig|6666666.65904.peg.647 CDS gi|481785044|gb|ARAV01000015.1| 57462 56755 -3 - 708 Transcriptional regulator, GntR family - none -
fig|6666666.65904.peg.648 CDS gi|481785044|gb|ARAV01000015.1| 58725 57589 -3 - 1137 Cystathionine gamma-lyase (EC 4.4.1.1) Cysteine Biosynthesis;
Glycine and Serine Utilization;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.649 CDS gi|481785044|gb|ARAV01000015.1| 58867 59853 1 + 987 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65904.peg.650 CDS gi|481785044|gb|ARAV01000015.1| 59871 60245 3 + 375 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65904.peg.651 CDS gi|481785044|gb|ARAV01000015.1| 60253 61407 1 + 1155 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.65904.peg.652 CDS gi|481785044|gb|ARAV01000015.1| 62035 61415 -1 - 621 FIG00545013: hypothetical protein - none -
fig|6666666.65904.peg.653 CDS gi|481785044|gb|ARAV01000015.1| 62397 62032 -3 - 366 FIG00544139: hypothetical protein - none -
fig|6666666.65904.peg.654 CDS gi|481785044|gb|ARAV01000015.1| 64153 62483 -1 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.655 CDS gi|481785044|gb|ARAV01000015.1| 64863 64210 -3 - 654 Putative single-strand binding protein - none -
fig|6666666.65904.peg.656 CDS gi|481785044|gb|ARAV01000015.1| 67209 64993 -3 - 2217 Copper resistance protein D Copper homeostasis
fig|6666666.65904.peg.657 CDS gi|481785044|gb|ARAV01000015.1| 67245 68159 3 + 915 Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) DNA-binding regulatory proteins, strays
fig|6666666.65904.peg.658 CDS gi|481785044|gb|ARAV01000015.1| 68535 68765 3 + 231 Transcriptional regulator, Cro/CI family - none -
fig|6666666.65904.peg.659 CDS gi|481785044|gb|ARAV01000015.1| 68762 69562 2 + 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.65904.peg.660 CDS gi|481785044|gb|ARAV01000015.1| 69691 69566 -1 - 126 hypothetical protein - none -
fig|6666666.65904.peg.661 CDS gi|481785044|gb|ARAV01000015.1| 70437 69670 -3 - 768 Beta-glucoside bgl operon antiterminator, BglG family Beta-Glucoside Metabolism
fig|6666666.65904.peg.662 CDS gi|481785044|gb|ARAV01000015.1| 71866 70451 -1 - 1416 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism
fig|6666666.65904.peg.663 CDS gi|481785044|gb|ARAV01000015.1| 72345 71893 -3 - 453 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism
fig|6666666.65904.peg.664 CDS gi|481785044|gb|ARAV01000015.1| 73311 72373 -3 - 939 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism
fig|6666666.65904.peg.665 CDS gi|481785044|gb|ARAV01000015.1| 75380 73332 -2 - 2049 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65904.peg.666 CDS gi|481785044|gb|ARAV01000015.1| 75600 76421 3 + 822 hypothetical protein - none -
fig|6666666.65904.peg.667 CDS gi|481785044|gb|ARAV01000015.1| 76970 76386 -2 - 585 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.65904.peg.668 CDS gi|481785044|gb|ARAV01000015.1| 77313 76954 -3 - 360 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.65904.peg.669 CDS gi|481785049|gb|ARAV01000014.1| 666 899 3 + 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.65904.peg.670 CDS gi|481785049|gb|ARAV01000014.1| 1084 1629 1 + 546 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65904.peg.671 CDS gi|481785049|gb|ARAV01000014.1| 1714 3879 1 + 2166 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65904.peg.672 CDS gi|481785049|gb|ARAV01000014.1| 4665 3952 -3 - 714 Transcriptional regulator, GntR family - none -
fig|6666666.65904.peg.673 CDS gi|481785049|gb|ARAV01000014.1| 6222 4855 -3 - 1368 Exopolysaccharide biosynthesis transcriptional activator EpsA Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65904.peg.674 CDS gi|481785049|gb|ARAV01000014.1| 7086 8837 3 + 1752 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.65904.peg.675 CDS gi|481785049|gb|ARAV01000014.1| 8834 9985 2 + 1152 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase N-linked Glycosylation in Bacteria
fig|6666666.65904.peg.676 CDS gi|481785049|gb|ARAV01000014.1| 9982 11019 1 + 1038 ATP-grasp enzyme-like protein - none -
fig|6666666.65904.peg.677 CDS gi|481785049|gb|ARAV01000014.1| 11087 12331 2 + 1245 hypothetical protein - none -
fig|6666666.65904.peg.678 CDS gi|481785049|gb|ARAV01000014.1| 12402 13172 3 + 771 Glycosyl transferase, group 2 family protein - none -
fig|6666666.65904.peg.679 CDS gi|481785049|gb|ARAV01000014.1| 13209 13952 3 + 744 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.65904.peg.680 CDS gi|481785049|gb|ARAV01000014.1| 15120 13942 -3 - 1179 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65904.peg.681 CDS gi|481785049|gb|ARAV01000014.1| 15501 16496 3 + 996 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65904.peg.682 CDS gi|481785049|gb|ARAV01000014.1| 16940 18634 2 + 1695 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65904.peg.683 CDS gi|481785049|gb|ARAV01000014.1| 18800 20053 2 + 1254 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.684 CDS gi|481785049|gb|ARAV01000014.1| 20053 20799 1 + 747 FIG00546117: hypothetical protein - none -
fig|6666666.65904.peg.685 CDS gi|481785049|gb|ARAV01000014.1| 20919 20803 -3 - 117 hypothetical protein - none -
fig|6666666.65904.peg.686 CDS gi|481785049|gb|ARAV01000014.1| 21574 20954 -1 - 621 hypothetical protein - none -
fig|6666666.65904.peg.687 CDS gi|481785049|gb|ARAV01000014.1| 22342 21653 -1 - 690 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.65904.peg.688 CDS gi|481785049|gb|ARAV01000014.1| 24406 22424 -1 - 1983 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65904.peg.689 CDS gi|481785049|gb|ARAV01000014.1| 25689 24418 -3 - 1272 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.65904.peg.690 CDS gi|481785049|gb|ARAV01000014.1| 26376 25846 -3 - 531 hypothetical protein - none -
fig|6666666.65904.peg.691 CDS gi|481785049|gb|ARAV01000014.1| 26556 26843 3 + 288 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65904.peg.692 CDS gi|481785049|gb|ARAV01000014.1| 26903 27439 2 + 537 Transcriptional regulatory protein - none -
fig|6666666.65904.peg.693 CDS gi|481785049|gb|ARAV01000014.1| 27474 28421 3 + 948 possible hydrolase - none -
fig|6666666.65904.peg.694 CDS gi|481785049|gb|ARAV01000014.1| 28502 29152 2 + 651 FIG00545125: hypothetical protein - none -
fig|6666666.65904.peg.695 CDS gi|481785049|gb|ARAV01000014.1| 29379 29780 3 + 402 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.696 CDS gi|481785049|gb|ARAV01000014.1| 29792 30643 2 + 852 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.697 CDS gi|481785049|gb|ARAV01000014.1| 30652 31464 1 + 813 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.65904.peg.698 CDS gi|481785049|gb|ARAV01000014.1| 31514 32245 2 + 732 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended
fig|6666666.65904.peg.699 CDS gi|481785049|gb|ARAV01000014.1| 32239 32850 1 + 612 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65904.peg.700 CDS gi|481785049|gb|ARAV01000014.1| 33243 32851 -3 - 393 FIG00543835: hypothetical protein - none -
fig|6666666.65904.peg.701 CDS gi|481785049|gb|ARAV01000014.1| 33717 33244 -3 - 474 hypothetical protein - none -
fig|6666666.65904.peg.702 CDS gi|481785049|gb|ARAV01000014.1| 34190 43030 2 + 8841 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65904.peg.703 CDS gi|481785049|gb|ARAV01000014.1| 43033 43413 1 + 381 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.704 CDS gi|481785049|gb|ARAV01000014.1| 44229 43588 -3 - 642 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.705 CDS gi|481785049|gb|ARAV01000014.1| 44725 44231 -1 - 495 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65904.peg.706 CDS gi|481785049|gb|ARAV01000014.1| 44796 45074 3 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65904.peg.707 CDS gi|481785049|gb|ARAV01000014.1| 45163 45762 1 + 600 putative lipoprotein - none -
fig|6666666.65904.peg.708 CDS gi|481785049|gb|ARAV01000014.1| 46335 45772 -3 - 564 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.65904.peg.709 CDS gi|481785049|gb|ARAV01000014.1| 46874 46374 -2 - 501 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.65904.peg.710 CDS gi|481785049|gb|ARAV01000014.1| 48358 47039 -1 - 1320 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.65904.peg.711 CDS gi|481785049|gb|ARAV01000014.1| 49209 48382 -3 - 828 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.65904.peg.712 CDS gi|481785049|gb|ARAV01000014.1| 50761 49400 -1 - 1362 D-mannonate oxidoreductase (EC 1.1.1.57) - none -
fig|6666666.65904.peg.713 CDS gi|481785049|gb|ARAV01000014.1| 52029 50758 -3 - 1272 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.65904.peg.714 CDS gi|481785049|gb|ARAV01000014.1| 53020 52259 -1 - 762 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) - none -
fig|6666666.65904.peg.715 CDS gi|481785049|gb|ARAV01000014.1| 54211 53090 -1 - 1122 transcriptional regulator - none -
fig|6666666.65904.peg.716 CDS gi|481785049|gb|ARAV01000014.1| 55139 54444 -2 - 696 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65904.peg.717 CDS gi|481785049|gb|ARAV01000014.1| 57016 55136 -1 - 1881 hypothetical protein - none -
fig|6666666.65904.peg.718 CDS gi|481785049|gb|ARAV01000014.1| 57523 58626 1 + 1104 putative lipoprotein - none -
fig|6666666.65904.peg.719 CDS gi|481785049|gb|ARAV01000014.1| 58636 59595 1 + 960 FIG00544715: hypothetical protein - none -
fig|6666666.65904.peg.720 CDS gi|481785049|gb|ARAV01000014.1| 59719 60987 1 + 1269 hypothetical protein - none -
fig|6666666.65904.peg.721 CDS gi|481785049|gb|ARAV01000014.1| 61241 61948 2 + 708 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.722 CDS gi|481785049|gb|ARAV01000014.1| 61983 62786 3 + 804 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65904.peg.723 CDS gi|481785049|gb|ARAV01000014.1| 62801 63943 2 + 1143 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) - none -
fig|6666666.65904.peg.724 CDS gi|481785049|gb|ARAV01000014.1| 64003 64767 1 + 765 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC 1.1.1.-) - none -
fig|6666666.65904.peg.725 CDS gi|481785049|gb|ARAV01000014.1| 64805 67741 2 + 2937 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.65904.peg.726 CDS gi|481785049|gb|ARAV01000014.1| 67741 68520 1 + 780 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65904.peg.727 CDS gi|481785049|gb|ARAV01000014.1| 68528 69388 2 + 861 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.65904.peg.728 CDS gi|481785049|gb|ARAV01000014.1| 69381 70649 3 + 1269 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.65904.peg.729 CDS gi|481785049|gb|ARAV01000014.1| 70649 71338 2 + 690 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.730 CDS gi|481785049|gb|ARAV01000014.1| 72551 71349 -2 - 1203 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65904.peg.731 CDS gi|481785049|gb|ARAV01000014.1| 72816 74066 3 + 1251 Manganese transport protein MntH - none -
fig|6666666.65904.peg.732 CDS gi|481785049|gb|ARAV01000014.1| 74741 74061 -2 - 681 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.65904.peg.733 CDS gi|481785049|gb|ARAV01000014.1| 75533 74823 -2 - 711 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65904.peg.734 CDS gi|481785049|gb|ARAV01000014.1| 76556 75921 -2 - 636 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65904.peg.735 CDS gi|481785049|gb|ARAV01000014.1| 76774 78330 1 + 1557 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.65904.peg.736 CDS gi|481785052|gb|ARAV01000013.1| 16 189 1 + 174 Mobile element protein - none -
fig|6666666.65904.peg.737 CDS gi|481785052|gb|ARAV01000013.1| 2086 971 -1 - 1116 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65904.peg.738 CDS gi|481785052|gb|ARAV01000013.1| 2917 2087 -1 - 831 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) NAD and NADP cofactor biosynthesis global
fig|6666666.65904.peg.739 CDS gi|481785052|gb|ARAV01000013.1| 4216 2927 -1 - 1290 Quinolinate synthetase (EC 2.5.1.72) NAD and NADP cofactor biosynthesis global
fig|6666666.65904.peg.740 CDS gi|481785052|gb|ARAV01000013.1| 4864 4220 -1 - 645 Nudix-related transcriptional regulator NrtR NAD and NADP cofactor biosynthesis global
fig|6666666.65904.peg.741 CDS gi|481785052|gb|ARAV01000013.1| 5521 5976 1 + 456 hypothetical protein - none -
fig|6666666.65904.peg.742 CDS gi|481785052|gb|ARAV01000013.1| 6066 6992 3 + 927 FIG00545591: hypothetical protein - none -
fig|6666666.65904.peg.743 CDS gi|481785052|gb|ARAV01000013.1| 8589 7024 -3 - 1566 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65904.peg.744 CDS gi|481785052|gb|ARAV01000013.1| 9125 8691 -2 - 435 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.745 CDS gi|481785052|gb|ARAV01000013.1| 9295 9774 1 + 480 hypothetical protein - none -
fig|6666666.65904.peg.746 CDS gi|481785052|gb|ARAV01000013.1| 9776 11212 2 + 1437 Multicopper oxidase Copper homeostasis
fig|6666666.65904.peg.747 CDS gi|481785052|gb|ARAV01000013.1| 12278 11214 -2 - 1065 Phage-encoded chromosome degrading nuclease YokF - none -
fig|6666666.65904.peg.748 CDS gi|481785052|gb|ARAV01000013.1| 13461 12385 -3 - 1077 No significant database matches - none -
fig|6666666.65904.peg.749 CDS gi|481785052|gb|ARAV01000013.1| 13500 13622 3 + 123 hypothetical protein - none -
fig|6666666.65904.peg.750 CDS gi|481785052|gb|ARAV01000013.1| 18798 13600 -3 - 5199 hypothetical protein - none -
fig|6666666.65904.peg.751 CDS gi|481785052|gb|ARAV01000013.1| 20639 19008 -2 - 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.65904.peg.752 CDS gi|481785052|gb|ARAV01000013.1| 20799 21527 3 + 729 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.65904.peg.753 CDS gi|481785052|gb|ARAV01000013.1| 21539 22000 2 + 462 FIG00545249: hypothetical protein - none -
fig|6666666.65904.peg.754 CDS gi|481785052|gb|ARAV01000013.1| 22722 21997 -3 - 726 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.65904.peg.755 CDS gi|481785052|gb|ARAV01000013.1| 22756 23940 1 + 1185 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65904.peg.756 CDS gi|481785052|gb|ARAV01000013.1| 24002 24478 2 + 477 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65904.peg.757 CDS gi|481785052|gb|ARAV01000013.1| 24629 24955 2 + 327 hypothetical protein - none -
fig|6666666.65904.peg.758 CDS gi|481785052|gb|ARAV01000013.1| 25749 24952 -3 - 798 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.759 CDS gi|481785052|gb|ARAV01000013.1| 25902 26783 3 + 882 hypothetical protein - none -
fig|6666666.65904.peg.760 CDS gi|481785052|gb|ARAV01000013.1| 27101 26790 -2 - 312 hypothetical protein - none -
fig|6666666.65904.peg.761 CDS gi|481785052|gb|ARAV01000013.1| 27836 27180 -2 - 657 FIG00545912: hypothetical protein - none -
fig|6666666.65904.peg.762 CDS gi|481785052|gb|ARAV01000013.1| 27998 29581 2 + 1584 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65904.peg.763 CDS gi|481785052|gb|ARAV01000013.1| 29605 30921 1 + 1317 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65904.peg.764 CDS gi|481785052|gb|ARAV01000013.1| 32269 30914 -1 - 1356 D-beta-hydroxybutyrate permease Polyhydroxybutyrate metabolism
fig|6666666.65904.peg.765 CDS gi|481785052|gb|ARAV01000013.1| 32262 32429 3 + 168 hypothetical protein - none -
fig|6666666.65904.peg.766 CDS gi|481785052|gb|ARAV01000013.1| 32510 33091 2 + 582 hypothetical protein - none -
fig|6666666.65904.peg.767 CDS gi|481785052|gb|ARAV01000013.1| 34673 33102 -2 - 1572 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65904.peg.768 CDS gi|481785052|gb|ARAV01000013.1| 34838 35743 2 + 906 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65904.peg.769 CDS gi|481785052|gb|ARAV01000013.1| 35792 36871 2 + 1080 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65904.peg.770 CDS gi|481785052|gb|ARAV01000013.1| 37197 37496 3 + 300 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65904.peg.771 CDS gi|481785052|gb|ARAV01000013.1| 37871 37509 -2 - 363 FIG00544777: hypothetical protein - none -
fig|6666666.65904.peg.772 CDS gi|481785052|gb|ARAV01000013.1| 38122 38544 1 + 423 FIG00543823: hypothetical protein - none -
fig|6666666.65904.peg.773 CDS gi|481785052|gb|ARAV01000013.1| 38658 40028 3 + 1371 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65904.peg.774 CDS gi|481785052|gb|ARAV01000013.1| 40039 41022 1 + 984 FIG00545059: hypothetical protein - none -
fig|6666666.65904.peg.775 CDS gi|481785052|gb|ARAV01000013.1| 41068 42237 1 + 1170 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65904.peg.776 CDS gi|481785052|gb|ARAV01000013.1| 43188 42307 -3 - 882 hypothetical protein - none -
fig|6666666.65904.peg.777 CDS gi|481785052|gb|ARAV01000013.1| 43626 43979 3 + 354 FIG00544092: hypothetical protein - none -
fig|6666666.65904.peg.778 CDS gi|481785052|gb|ARAV01000013.1| 44094 45551 3 + 1458 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.779 CDS gi|481785052|gb|ARAV01000013.1| 45554 46156 2 + 603 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.65904.peg.780 CDS gi|481785052|gb|ARAV01000013.1| 46169 46852 2 + 684 DNA-binding response regulator mtrA - none -
fig|6666666.65904.peg.781 CDS gi|481785052|gb|ARAV01000013.1| 46922 48433 2 + 1512 Putative two component system sensor kinase - none -
fig|6666666.65904.peg.782 CDS gi|481785052|gb|ARAV01000013.1| 48436 50172 1 + 1737 LpqB - none -
fig|6666666.65904.peg.783 CDS gi|481785052|gb|ARAV01000013.1| 50511 50774 3 + 264 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.65904.peg.784 CDS gi|481785052|gb|ARAV01000013.1| 50876 51550 2 + 675 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65904.peg.785 CDS gi|481785052|gb|ARAV01000013.1| 51730 54273 1 + 2544 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65904.peg.786 CDS gi|481785052|gb|ARAV01000013.1| 54531 54280 -3 - 252 hypothetical protein - none -
fig|6666666.65904.peg.787 CDS gi|481785052|gb|ARAV01000013.1| 54820 55215 1 + 396 FIG00996758: hypothetical protein - none -
fig|6666666.65904.peg.788 CDS gi|481785052|gb|ARAV01000013.1| 55218 55712 3 + 495 FIG00544397: hypothetical protein - none -
fig|6666666.65904.peg.789 CDS gi|481785052|gb|ARAV01000013.1| 56597 55686 -2 - 912 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65904.peg.790 CDS gi|481785052|gb|ARAV01000013.1| 57984 56701 -3 - 1284 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.791 CDS gi|481785052|gb|ARAV01000013.1| 58004 58663 2 + 660 FIG00543821: hypothetical protein - none -
fig|6666666.65904.peg.792 CDS gi|481785052|gb|ARAV01000013.1| 58734 59288 3 + 555 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65904.peg.793 CDS gi|481785052|gb|ARAV01000013.1| 59285 59563 2 + 279 hypothetical protein - none -
fig|6666666.65904.peg.794 CDS gi|481785052|gb|ARAV01000013.1| 60101 59841 -2 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65904.peg.795 CDS gi|481785052|gb|ARAV01000013.1| 60715 61152 1 + 438 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.796 CDS gi|481785052|gb|ARAV01000013.1| 62342 61149 -2 - 1194 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65904.peg.797 CDS gi|481785052|gb|ARAV01000013.1| 63686 62343 -2 - 1344 putative ATP-dependent RNA helicase - none -
fig|6666666.65904.peg.798 CDS gi|481785052|gb|ARAV01000013.1| 63779 64003 2 + 225 hypothetical protein - none -
fig|6666666.65904.peg.799 CDS gi|481785052|gb|ARAV01000013.1| 64024 64998 1 + 975 FIG00544386: hypothetical protein - none -
fig|6666666.65904.peg.800 CDS gi|481785052|gb|ARAV01000013.1| 65009 65731 2 + 723 hypothetical protein - none -
fig|6666666.65904.peg.801 CDS gi|481785052|gb|ARAV01000013.1| 65735 68785 2 + 3051 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65904.peg.802 CDS gi|481785052|gb|ARAV01000013.1| 68778 72056 3 + 3279 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65904.peg.803 CDS gi|481785052|gb|ARAV01000013.1| 72060 73145 3 + 1086 Potassium channel protein Potassium homeostasis
fig|6666666.65904.peg.804 CDS gi|481785052|gb|ARAV01000013.1| 73145 73909 2 + 765 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65904.peg.805 CDS gi|481785052|gb|ARAV01000013.1| 73910 75955 2 + 2046 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65904.peg.806 CDS gi|481785052|gb|ARAV01000013.1| 76820 75939 -2 - 882 hypothetical protein - none -
fig|6666666.65904.peg.807 CDS gi|481785052|gb|ARAV01000013.1| 76873 77373 1 + 501 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65904.peg.808 CDS gi|481785052|gb|ARAV01000013.1| 78776 77370 -2 - 1407 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65904.peg.809 CDS gi|481785052|gb|ARAV01000013.1| 78858 79940 3 + 1083 Lon-like protease with PDZ domain - none -
fig|6666666.65904.peg.810 CDS gi|481785052|gb|ARAV01000013.1| 80647 79946 -1 - 702 FIG00544133: hypothetical protein - none -
fig|6666666.65904.peg.811 CDS gi|481785052|gb|ARAV01000013.1| 81228 80695 -3 - 534 FIG129854: hypothetical protein - none -
fig|6666666.65904.peg.812 CDS gi|481785052|gb|ARAV01000013.1| 81376 84285 1 + 2910 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65904.peg.813 CDS gi|481785052|gb|ARAV01000013.1| 85696 84656 -1 - 1041 Mobile element protein - none -
fig|6666666.65904.peg.814 CDS gi|481785052|gb|ARAV01000013.1| 86112 86729 3 + 618 2,4@1-dihydroxyacetophenone dioxygenase - none -
fig|6666666.65904.peg.815 CDS gi|481785052|gb|ARAV01000013.1| 86819 86694 -2 - 126 hypothetical protein - none -
fig|6666666.65904.peg.816 CDS gi|481785056|gb|ARAV01000012.1| 6203 2301 -2 - 3903 hypothetical protein - none -
fig|6666666.65904.peg.817 CDS gi|481785056|gb|ARAV01000012.1| 6543 6659 3 + 117 hypothetical protein - none -
fig|6666666.65904.peg.818 CDS gi|481785056|gb|ARAV01000012.1| 6911 7786 2 + 876 O-antigen export system, permease protein - none -
fig|6666666.65904.peg.819 CDS gi|481785056|gb|ARAV01000012.1| 8109 8606 3 + 498 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.65904.peg.820 CDS gi|481785056|gb|ARAV01000012.1| 10896 8662 -3 - 2235 hypothetical protein - none -
fig|6666666.65904.peg.821 CDS gi|481785056|gb|ARAV01000012.1| 13737 11086 -3 - 2652 conserved domain protein - none -
fig|6666666.65904.peg.822 CDS gi|481785056|gb|ARAV01000012.1| 15531 13993 -3 - 1539 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65904.peg.823 CDS gi|481785056|gb|ARAV01000012.1| 16817 15528 -2 - 1290 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65904.peg.824 CDS gi|481785056|gb|ARAV01000012.1| 18296 17079 -2 - 1218 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65904.peg.825 CDS gi|481785056|gb|ARAV01000012.1| 18745 19944 1 + 1200 Drug resistance transporter - none -
fig|6666666.65904.peg.826 CDS gi|481785056|gb|ARAV01000012.1| 21120 19948 -3 - 1173 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) Sialic Acid Metabolism
fig|6666666.65904.peg.827 CDS gi|481785056|gb|ARAV01000012.1| 21300 21569 3 + 270 hypothetical protein - none -
fig|6666666.65904.peg.828 CDS gi|481785056|gb|ARAV01000012.1| 22528 21578 -1 - 951 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65904.peg.829 CDS gi|481785056|gb|ARAV01000012.1| 23094 22525 -3 - 570 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65904.peg.830 CDS gi|481785056|gb|ARAV01000012.1| 23555 23121 -2 - 435 Putative membrane protein - none -
fig|6666666.65904.peg.831 CDS gi|481785056|gb|ARAV01000012.1| 24442 23708 -1 - 735 hypothetical protein - none -
fig|6666666.65904.peg.832 CDS gi|481785056|gb|ARAV01000012.1| 25037 25576 2 + 540 hypothetical protein - none -
fig|6666666.65904.peg.833 CDS gi|481785056|gb|ARAV01000012.1| 26921 25644 -2 - 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.65904.peg.834 CDS gi|481785056|gb|ARAV01000012.1| 27792 27046 -3 - 747 FIG00545464: hypothetical protein - none -
fig|6666666.65904.peg.835 CDS gi|481785056|gb|ARAV01000012.1| 28073 28504 2 + 432 hypothetical protein - none -
fig|6666666.65904.peg.836 CDS gi|481785056|gb|ARAV01000012.1| 29106 28501 -3 - 606 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65904.peg.837 CDS gi|481785056|gb|ARAV01000012.1| 31071 29176 -3 - 1896 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65904.peg.838 CDS gi|481785056|gb|ARAV01000012.1| 31220 31723 2 + 504 putative ribonuclease - none -
fig|6666666.65904.peg.839 CDS gi|481785056|gb|ARAV01000012.1| 31716 31979 3 + 264 hypothetical protein - none -
fig|6666666.65904.peg.840 CDS gi|481785056|gb|ARAV01000012.1| 33109 32000 -1 - 1110 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65904.peg.841 CDS gi|481785056|gb|ARAV01000012.1| 33380 35398 2 + 2019 FIG00543878: hypothetical protein - none -
fig|6666666.65904.peg.842 CDS gi|481785056|gb|ARAV01000012.1| 35884 35408 -1 - 477 hypothetical protein - none -
fig|6666666.65904.peg.843 CDS gi|481785056|gb|ARAV01000012.1| 36384 35881 -3 - 504 FIG00544046: hypothetical protein - none -
fig|6666666.65904.peg.844 CDS gi|481785056|gb|ARAV01000012.1| 37766 36384 -2 - 1383 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65904.peg.845 CDS gi|481785056|gb|ARAV01000012.1| 38065 38562 1 + 498 putative transcription regulator - none -
fig|6666666.65904.peg.846 CDS gi|481785056|gb|ARAV01000012.1| 38695 39123 1 + 429 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.65904.peg.847 CDS gi|481785056|gb|ARAV01000012.1| 40211 39120 -2 - 1092 FIG00544679: hypothetical protein - none -
fig|6666666.65904.peg.848 CDS gi|481785056|gb|ARAV01000012.1| 40945 40208 -1 - 738 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65904.peg.849 CDS gi|481785056|gb|ARAV01000012.1| 41693 40953 -2 - 741 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65904.peg.850 CDS gi|481785056|gb|ARAV01000012.1| 42621 41695 -3 - 927 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65904.peg.851 CDS gi|481785056|gb|ARAV01000012.1| 43461 42637 -3 - 825 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65904.peg.852 CDS gi|481785056|gb|ARAV01000012.1| 44312 43461 -2 - 852 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65904.peg.853 CDS gi|481785056|gb|ARAV01000012.1| 44504 45568 2 + 1065 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4) Acetoin, butanediol metabolism
fig|6666666.65904.peg.854 CDS gi|481785056|gb|ARAV01000012.1| 47030 45696 -2 - 1335 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.65904.peg.855 CDS gi|481785056|gb|ARAV01000012.1| 47614 47030 -1 - 585 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65904.peg.856 CDS gi|481785056|gb|ARAV01000012.1| 48618 47611 -3 - 1008 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.65904.peg.857 CDS gi|481785056|gb|ARAV01000012.1| 49333 48629 -1 - 705 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.65904.peg.858 CDS gi|481785056|gb|ARAV01000012.1| 50460 49333 -3 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65904.peg.859 CDS gi|481785056|gb|ARAV01000012.1| 51496 50480 -1 - 1017 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65904.peg.860 CDS gi|481785056|gb|ARAV01000012.1| 52650 51544 -3 - 1107 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65904.peg.861 CDS gi|481785056|gb|ARAV01000012.1| 53347 52676 -1 - 672 FIG00543880: hypothetical protein - none -
fig|6666666.65904.peg.862 CDS gi|481785056|gb|ARAV01000012.1| 55338 53476 -3 - 1863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.863 CDS gi|481785056|gb|ARAV01000012.1| 55503 57638 3 + 2136 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65904.peg.864 CDS gi|481785056|gb|ARAV01000012.1| 57785 57645 -2 - 141 hypothetical protein - none -
fig|6666666.65904.peg.865 CDS gi|481785056|gb|ARAV01000012.1| 57971 57792 -2 - 180 hypothetical protein - none -
fig|6666666.65904.peg.866 CDS gi|481785056|gb|ARAV01000012.1| 59865 57976 -3 - 1890 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.65904.peg.867 CDS gi|481785056|gb|ARAV01000012.1| 60035 61255 2 + 1221 FIG00547479: hypothetical protein - none -
fig|6666666.65904.peg.868 CDS gi|481785056|gb|ARAV01000012.1| 61818 61252 -3 - 567 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65904.peg.869 CDS gi|481785056|gb|ARAV01000012.1| 62482 61916 -1 - 567 hypothetical protein - none -
fig|6666666.65904.peg.870 CDS gi|481785056|gb|ARAV01000012.1| 62598 64472 3 + 1875 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.871 CDS gi|481785056|gb|ARAV01000012.1| 64497 65633 3 + 1137 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.65904.peg.872 CDS gi|481785056|gb|ARAV01000012.1| 65644 67398 1 + 1755 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.65904.peg.873 CDS gi|481785056|gb|ARAV01000012.1| 67398 68504 3 + 1107 uncharacterized protein probably involved in trehalose biosynthesis - none -
fig|6666666.65904.peg.874 CDS gi|481785056|gb|ARAV01000012.1| 68591 69985 2 + 1395 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65904.peg.875 CDS gi|481785056|gb|ARAV01000012.1| 70077 71102 3 + 1026 FIG00546389: hypothetical protein - none -
fig|6666666.65904.peg.876 CDS gi|481785056|gb|ARAV01000012.1| 71276 72409 2 + 1134 hypothetical protein - none -
fig|6666666.65904.peg.877 CDS gi|481785056|gb|ARAV01000012.1| 73040 72411 -2 - 630 Auxin Efflux Carrier - none -
fig|6666666.65904.peg.878 CDS gi|481785056|gb|ARAV01000012.1| 73327 72992 -1 - 336 putative transport protein - none -
fig|6666666.65904.peg.879 CDS gi|481785056|gb|ARAV01000012.1| 73530 75020 3 + 1491 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.65904.peg.880 CDS gi|481785056|gb|ARAV01000012.1| 75017 75955 2 + 939 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65904.peg.881 CDS gi|481785056|gb|ARAV01000012.1| 75952 76773 1 + 822 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65904.peg.882 CDS gi|481785056|gb|ARAV01000012.1| 76770 78140 3 + 1371 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) - none -
fig|6666666.65904.peg.883 CDS gi|481785056|gb|ARAV01000012.1| 78998 78117 -2 - 882 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65904.peg.884 CDS gi|481785056|gb|ARAV01000012.1| 80182 79001 -1 - 1182 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65904.peg.885 CDS gi|481785056|gb|ARAV01000012.1| 81220 80255 -1 - 966 Aldo-keto reductase - none -
fig|6666666.65904.peg.886 CDS gi|481785056|gb|ARAV01000012.1| 81324 81935 3 + 612 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.887 CDS gi|481785056|gb|ARAV01000012.1| 82381 81905 -1 - 477 2@1-5@1 RNA ligase RNA processing orphans
fig|6666666.65904.peg.888 CDS gi|481785056|gb|ARAV01000012.1| 82926 82447 -3 - 480 hypothetical protein - none -
fig|6666666.65904.peg.889 CDS gi|481785056|gb|ARAV01000012.1| 82957 83865 1 + 909 Ribokinase (EC 2.7.1.15) D-ribose utilization
fig|6666666.65904.peg.890 CDS gi|481785056|gb|ARAV01000012.1| 83996 83862 -2 - 135 hypothetical protein - none -
fig|6666666.65904.peg.891 CDS gi|481785056|gb|ARAV01000012.1| 85278 84007 -3 - 1272 Proline iminopeptidase (EC 3.4.11.5) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65904.peg.892 CDS gi|481785056|gb|ARAV01000012.1| 85308 86039 3 + 732 Aldose 1-epimerase - none -
fig|6666666.65904.peg.893 CDS gi|481785056|gb|ARAV01000012.1| 86157 87863 3 + 1707 FIG00548821: hypothetical protein - none -
fig|6666666.65904.peg.894 CDS gi|481785056|gb|ARAV01000012.1| 88491 87865 -3 - 627 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - none -
fig|6666666.65904.peg.895 CDS gi|481785056|gb|ARAV01000012.1| 88654 90612 1 + 1959 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65904.peg.896 CDS gi|481785056|gb|ARAV01000012.1| 90623 91963 2 + 1341 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.65904.peg.897 CDS gi|481785056|gb|ARAV01000012.1| 92006 92410 2 + 405 hypothetical protein - none -
fig|6666666.65904.peg.898 CDS gi|481785056|gb|ARAV01000012.1| 93833 92397 -2 - 1437 Mobile element protein - none -
fig|6666666.65904.peg.899 CDS gi|481785060|gb|ARAV01000011.1| 20 172 2 + 153 Mobile element protein - none -
fig|6666666.65904.peg.900 CDS gi|481785060|gb|ARAV01000011.1| 3463 2033 -1 - 1431 Predicted membrane protein (DUF2319) - none -
fig|6666666.65904.peg.901 CDS gi|481785060|gb|ARAV01000011.1| 4039 5913 1 + 1875 Pyruvate kinase family protein - none -
fig|6666666.65904.peg.902 CDS gi|481785060|gb|ARAV01000011.1| 5910 6623 3 + 714 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) CBSS-176299.4.peg.1996A;
Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65904.peg.903 CDS gi|481785060|gb|ARAV01000011.1| 6634 7545 1 + 912 hypothetical protein - none -
fig|6666666.65904.peg.904 CDS gi|481785060|gb|ARAV01000011.1| 7739 8689 2 + 951 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65904.peg.905 CDS gi|481785060|gb|ARAV01000011.1| 8689 9618 1 + 930 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65904.peg.906 CDS gi|481785060|gb|ARAV01000011.1| 9730 11055 1 + 1326 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65904.peg.907 CDS gi|481785060|gb|ARAV01000011.1| 11101 12234 1 + 1134 SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3) - none -
fig|6666666.65904.peg.908 CDS gi|481785060|gb|ARAV01000011.1| 12571 12320 -1 - 252 hypothetical protein - none -
fig|6666666.65904.peg.909 CDS gi|481785060|gb|ARAV01000011.1| 14028 12733 -3 - 1296 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65904.peg.910 CDS gi|481785060|gb|ARAV01000011.1| 14795 14097 -2 - 699 Putative conserved integral membrane protein - none -
fig|6666666.65904.peg.911 CDS gi|481785060|gb|ARAV01000011.1| 14828 15748 2 + 921 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65904.peg.912 CDS gi|481785060|gb|ARAV01000011.1| 15748 16341 1 + 594 putative phosphoglycerate mutase - none -
fig|6666666.65904.peg.913 CDS gi|481785060|gb|ARAV01000011.1| 16698 16351 -3 - 348 FIG00544953: hypothetical protein - none -
fig|6666666.65904.peg.914 CDS gi|481785060|gb|ARAV01000011.1| 17768 16695 -2 - 1074 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.915 CDS gi|481785060|gb|ARAV01000011.1| 18342 17833 -3 - 510 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.65904.peg.916 CDS gi|481785060|gb|ARAV01000011.1| 18701 19981 2 + 1281 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65904.peg.917 CDS gi|481785060|gb|ARAV01000011.1| 19983 20861 3 + 879 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.918 CDS gi|481785060|gb|ARAV01000011.1| 20891 21733 2 + 843 Cof family hydrolase - none -
fig|6666666.65904.peg.919 CDS gi|481785060|gb|ARAV01000011.1| 21738 23225 3 + 1488 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.920 CDS gi|481785060|gb|ARAV01000011.1| 25273 23222 -1 - 2052 FIG00544841: hypothetical protein - none -
fig|6666666.65904.peg.921 CDS gi|481785060|gb|ARAV01000011.1| 25550 26728 2 + 1179 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65904.peg.922 CDS gi|481785060|gb|ARAV01000011.1| 26959 26813 -1 - 147 hypothetical protein - none -
fig|6666666.65904.peg.923 CDS gi|481785060|gb|ARAV01000011.1| 27226 27384 1 + 159 hypothetical protein - none -
fig|6666666.65904.peg.924 CDS gi|481785060|gb|ARAV01000011.1| 27557 28159 2 + 603 hypothetical protein - none -
fig|6666666.65904.peg.925 CDS gi|481785060|gb|ARAV01000011.1| 28422 28285 -3 - 138 hypothetical protein - none -
fig|6666666.65904.peg.926 CDS gi|481785060|gb|ARAV01000011.1| 28366 30321 1 + 1956 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65904.peg.927 CDS gi|481785060|gb|ARAV01000011.1| 30311 30817 2 + 507 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65904.peg.928 CDS gi|481785060|gb|ARAV01000011.1| 30814 31806 1 + 993 putative membrane protein - none -
fig|6666666.65904.peg.929 CDS gi|481785060|gb|ARAV01000011.1| 31844 33646 2 + 1803 hypothetical protein Rv3805c - none -
fig|6666666.65904.peg.930 CDS gi|481785060|gb|ARAV01000011.1| 33663 34751 3 + 1089 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65904.peg.931 CDS gi|481785060|gb|ARAV01000011.1| 35053 36981 1 + 1929 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65904.peg.932 CDS gi|481785060|gb|ARAV01000011.1| 37154 36978 -2 - 177 hypothetical protein - none -
fig|6666666.65904.peg.933 CDS gi|481785060|gb|ARAV01000011.1| 37228 37482 1 + 255 FIG00544389: hypothetical protein - none -
fig|6666666.65904.peg.934 CDS gi|481785060|gb|ARAV01000011.1| 37498 38430 1 + 933 hypothetical protein Rv3802c - none -
fig|6666666.65904.peg.935 CDS gi|481785060|gb|ARAV01000011.1| 38531 40366 2 + 1836 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.936 CDS gi|481785060|gb|ARAV01000011.1| 40641 45413 3 + 4773 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.937 CDS gi|481785060|gb|ARAV01000011.1| 45415 46956 1 + 1542 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65904.peg.938 CDS gi|481785060|gb|ARAV01000011.1| 47706 47146 -3 - 561 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) Protein-L-isoaspartate O-methyltransferase;
Stationary phase repair cluster
fig|6666666.65904.peg.939 CDS gi|481785060|gb|ARAV01000011.1| 48102 47746 -3 - 357 FIG00544939: hypothetical protein - none -
fig|6666666.65904.peg.940 CDS gi|481785060|gb|ARAV01000011.1| 49150 48113 -1 - 1038 conserved hypothetical protein 374 - none -
fig|6666666.65904.peg.941 CDS gi|481785060|gb|ARAV01000011.1| 51426 49147 -3 - 2280 putative integral membrane protein - none -
fig|6666666.65904.peg.942 CDS gi|481785060|gb|ARAV01000011.1| 52124 51444 -2 - 681 FIG00546304: hypothetical protein - none -
fig|6666666.65904.peg.943 CDS gi|481785060|gb|ARAV01000011.1| 52912 52124 -1 - 789 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.65904.peg.944 CDS gi|481785060|gb|ARAV01000011.1| 53483 55312 2 + 1830 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65904.peg.945 CDS gi|481785060|gb|ARAV01000011.1| 56236 55475 -1 - 762 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65904.peg.946 CDS gi|481785060|gb|ARAV01000011.1| 56266 57339 1 + 1074 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65904.peg.947 CDS gi|481785060|gb|ARAV01000011.1| 58762 57326 -1 - 1437 FIG00547077: hypothetical protein - none -
fig|6666666.65904.peg.948 CDS gi|481785060|gb|ARAV01000011.1| 59909 58767 -2 - 1143 hypothetical protein - none -
fig|6666666.65904.peg.949 CDS gi|481785060|gb|ARAV01000011.1| 60839 60189 -2 - 651 hypothetical protein - none -
fig|6666666.65904.peg.950 CDS gi|481785060|gb|ARAV01000011.1| 64009 60953 -1 - 3057 Conserved putative integral membrane protein - none -
fig|6666666.65904.peg.951 CDS gi|481785060|gb|ARAV01000011.1| 64247 64050 -2 - 198 FIG00543976: hypothetical protein - none -
fig|6666666.65904.peg.952 CDS gi|481785060|gb|ARAV01000011.1| 64751 64269 -2 - 483 hypothetical protein - none -
fig|6666666.65904.peg.953 CDS gi|481785060|gb|ARAV01000011.1| 64875 66083 3 + 1209 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.65904.peg.954 CDS gi|481785060|gb|ARAV01000011.1| 66121 67824 1 + 1704 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65904.peg.955 CDS gi|481785060|gb|ARAV01000011.1| 67986 69809 3 + 1824 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65904.peg.956 CDS gi|481785060|gb|ARAV01000011.1| 70552 69833 -1 - 720 putative secreted lipase - none -
fig|6666666.65904.peg.957 CDS gi|481785060|gb|ARAV01000011.1| 71617 70787 -1 - 831 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65904.peg.958 CDS gi|481785060|gb|ARAV01000011.1| 72180 73376 3 + 1197 Mobile element protein - none -
fig|6666666.65904.peg.959 CDS gi|481785060|gb|ARAV01000011.1| 73606 74175 1 + 570 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.65904.peg.960 CDS gi|481785060|gb|ARAV01000011.1| 74453 74184 -2 - 270 hypothetical protein - none -
fig|6666666.65904.peg.961 CDS gi|481785060|gb|ARAV01000011.1| 74804 76105 2 + 1302 PLP-dependent aminotransferase NCgl2355 (class III) - none -
fig|6666666.65904.peg.962 CDS gi|481785060|gb|ARAV01000011.1| 76165 76908 1 + 744 putative oxidoreductase - none -
fig|6666666.65904.peg.963 CDS gi|481785060|gb|ARAV01000011.1| 76924 77259 1 + 336 putative oxidoreductase - none -
fig|6666666.65904.peg.964 CDS gi|481785060|gb|ARAV01000011.1| 77350 78660 1 + 1311 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65904.peg.965 CDS gi|481785060|gb|ARAV01000011.1| 78678 79028 3 + 351 hypothetical protein - none -
fig|6666666.65904.peg.966 CDS gi|481785060|gb|ARAV01000011.1| 80352 79039 -3 - 1314 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65904.peg.967 CDS gi|481785060|gb|ARAV01000011.1| 80965 80450 -1 - 516 hypothetical protein - none -
fig|6666666.65904.peg.968 CDS gi|481785060|gb|ARAV01000011.1| 84093 81376 -3 - 2718 Fe-S oxidoreductase - none -
fig|6666666.65904.peg.969 CDS gi|481785060|gb|ARAV01000011.1| 84773 84195 -2 - 579 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.970 CDS gi|481785060|gb|ARAV01000011.1| 84817 85881 1 + 1065 hydrolase, alpha/beta fold family - none -
fig|6666666.65904.peg.971 CDS gi|481785060|gb|ARAV01000011.1| 87830 85887 -2 - 1944 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65904.peg.972 CDS gi|481785060|gb|ARAV01000011.1| 89538 87823 -3 - 1716 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65904.peg.973 CDS gi|481785060|gb|ARAV01000011.1| 91553 89721 -2 - 1833 hypothetical protein - none -
fig|6666666.65904.peg.974 CDS gi|481785060|gb|ARAV01000011.1| 93126 91774 -3 - 1353 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65904.peg.975 CDS gi|481785060|gb|ARAV01000011.1| 93454 95127 1 + 1674 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.65904.peg.976 CDS gi|481785060|gb|ARAV01000011.1| 95383 96165 1 + 783 Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Inorganic Sulfur Assimilation
fig|6666666.65904.peg.977 CDS gi|481785060|gb|ARAV01000011.1| 96165 97079 3 + 915 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65904.peg.978 CDS gi|481785060|gb|ARAV01000011.1| 97079 98368 2 + 1290 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65904.peg.979 CDS gi|481785060|gb|ARAV01000011.1| 98410 99147 1 + 738 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.65904.peg.980 CDS gi|481785060|gb|ARAV01000011.1| 99150 100106 3 + 957 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65904.peg.981 CDS gi|481785060|gb|ARAV01000011.1| 100109 101032 2 + 924 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65904.peg.982 CDS gi|481785060|gb|ARAV01000011.1| 101827 101991 1 + 165 hypothetical protein - none -
fig|6666666.65904.peg.983 CDS gi|481785060|gb|ARAV01000011.1| 102087 102284 3 + 198 hypothetical protein - none -
fig|6666666.65904.peg.984 CDS gi|481785060|gb|ARAV01000011.1| 102652 103212 1 + 561 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.985 CDS gi|481785060|gb|ARAV01000011.1| 103740 103216 -3 - 525 intracellular protease, PfpI family - none -
fig|6666666.65904.peg.986 CDS gi|481785060|gb|ARAV01000011.1| 105220 103844 -1 - 1377 putative integral membrane protein - none -
fig|6666666.65904.peg.987 CDS gi|481785060|gb|ARAV01000011.1| 105283 106269 1 + 987 hypothetical protein - none -
fig|6666666.65904.peg.988 CDS gi|481785060|gb|ARAV01000011.1| 106509 108377 3 + 1869 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65904.peg.989 CDS gi|481785060|gb|ARAV01000011.1| 108470 109165 2 + 696 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65904.peg.990 CDS gi|481785060|gb|ARAV01000011.1| 109355 110545 2 + 1191 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65904.peg.991 CDS gi|481785060|gb|ARAV01000011.1| 110568 110975 3 + 408 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65904.peg.992 CDS gi|481785060|gb|ARAV01000011.1| 111131 112651 2 + 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.993 CDS gi|481785060|gb|ARAV01000011.1| 114496 112727 -1 - 1770 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.994 CDS gi|481785060|gb|ARAV01000011.1| 115737 114547 -3 - 1191 protein of unknown function DUF1023 - none -
fig|6666666.65904.peg.995 CDS gi|481785060|gb|ARAV01000011.1| 115871 115734 -2 - 138 hypothetical protein - none -
fig|6666666.65904.peg.996 CDS gi|481785060|gb|ARAV01000011.1| 116069 116860 2 + 792 FIG00545709: hypothetical protein - none -
fig|6666666.65904.peg.997 CDS gi|481785060|gb|ARAV01000011.1| 118062 116857 -3 - 1206 flavohemoprotein - none -
fig|6666666.65904.peg.998 CDS gi|481785060|gb|ARAV01000011.1| 119163 118084 -3 - 1080 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.65904.peg.999 CDS gi|481785060|gb|ARAV01000011.1| 120469 119231 -1 - 1239 Probable NreB protein - none -
fig|6666666.65904.peg.1000 CDS gi|481785060|gb|ARAV01000011.1| 120815 120471 -2 - 345 transcriptional regulator, ArsR family - none -
fig|6666666.65904.peg.1001 CDS gi|481785060|gb|ARAV01000011.1| 122017 120902 -1 - 1116 FIG00547297: hypothetical protein - none -
fig|6666666.65904.peg.1002 CDS gi|481785060|gb|ARAV01000011.1| 122429 122229 -2 - 201 Mobile element protein - none -
fig|6666666.65904.peg.1003 CDS gi|481785064|gb|ARAV01000010.1| 279 965 3 + 687 ATP-binding protein of ABC transporter system - none -
fig|6666666.65904.peg.1004 CDS gi|481785064|gb|ARAV01000010.1| 962 2362 2 + 1401 hypothetical protein - none -
fig|6666666.65904.peg.1005 CDS gi|481785064|gb|ARAV01000010.1| 3414 2560 -3 - 855 Transcriptional regulator, DeoR family - none -
fig|6666666.65904.peg.1006 CDS gi|481785064|gb|ARAV01000010.1| 3648 4205 3 + 558 hypothetical protein - none -
fig|6666666.65904.peg.1007 CDS gi|481785064|gb|ARAV01000010.1| 4598 4224 -2 - 375 hypothetical protein - none -
fig|6666666.65904.peg.1008 CDS gi|481785064|gb|ARAV01000010.1| 4884 5495 3 + 612 hypothetical protein - none -
fig|6666666.65904.peg.1009 CDS gi|481785064|gb|ARAV01000010.1| 6110 6940 2 + 831 FIG00543872: hypothetical protein - none -
fig|6666666.65904.peg.1010 CDS gi|481785064|gb|ARAV01000010.1| 6960 7406 3 + 447 FIG00818182: hypothetical protein - none -
fig|6666666.65904.peg.1011 CDS gi|481785064|gb|ARAV01000010.1| 7403 8806 2 + 1404 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65904.peg.1012 CDS gi|481785064|gb|ARAV01000010.1| 8806 10203 1 + 1398 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65904.peg.1013 CDS gi|481785064|gb|ARAV01000010.1| 10200 11642 3 + 1443 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1014 CDS gi|481785064|gb|ARAV01000010.1| 11642 13219 2 + 1578 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65904.peg.1015 CDS gi|481785064|gb|ARAV01000010.1| 13219 15207 1 + 1989 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65904.peg.1016 CDS gi|481785064|gb|ARAV01000010.1| 15278 15547 2 + 270 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65904.peg.1017 CDS gi|481785064|gb|ARAV01000010.1| 16704 16060 -3 - 645 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.65904.peg.1018 CDS gi|481785064|gb|ARAV01000010.1| 17283 16759 -3 - 525 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65904.peg.1019 CDS gi|481785064|gb|ARAV01000010.1| 17764 17456 -1 - 309 hypothetical protein - none -
fig|6666666.65904.peg.1020 CDS gi|481785064|gb|ARAV01000010.1| 20837 18591 -2 - 2247 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.65904.peg.1021 CDS gi|481785064|gb|ARAV01000010.1| 21899 20922 -2 - 978 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65904.peg.1022 CDS gi|481785064|gb|ARAV01000010.1| 22187 22936 2 + 750 hypothetical protein - none -
fig|6666666.65904.peg.1023 CDS gi|481785064|gb|ARAV01000010.1| 23830 23982 1 + 153 hypothetical protein - none -
fig|6666666.65904.peg.1024 CDS gi|481785064|gb|ARAV01000010.1| 25647 24706 -3 - 942 ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65904.peg.1025 CDS gi|481785064|gb|ARAV01000010.1| 26360 25644 -2 - 717 ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65904.peg.1026 CDS gi|481785064|gb|ARAV01000010.1| 27421 26357 -1 - 1065 ABC transporter (iron.B12.siderophore.hemin) , permease component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65904.peg.1027 CDS gi|481785064|gb|ARAV01000010.1| 27498 27803 3 + 306 putative mercury resistance operon regulator MerR - none -
fig|6666666.65904.peg.1028 CDS gi|481785064|gb|ARAV01000010.1| 27838 28068 1 + 231 hypothetical protein - none -
fig|6666666.65904.peg.1029 CDS gi|481785064|gb|ARAV01000010.1| 28065 28205 3 + 141 hypothetical protein - none -
fig|6666666.65904.peg.1030 CDS gi|481785064|gb|ARAV01000010.1| 28730 28266 -2 - 465 Molecular chaperone (small heat shock protein) - none -
fig|6666666.65904.peg.1031 CDS gi|481785064|gb|ARAV01000010.1| 28949 29743 2 + 795 putative 3-alpha-hydroxysteroid dehydrogenase - none -
fig|6666666.65904.peg.1032 CDS gi|481785064|gb|ARAV01000010.1| 29765 30220 2 + 456 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.1033 CDS gi|481785064|gb|ARAV01000010.1| 31026 30235 -3 - 792 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65904.peg.1034 CDS gi|481785064|gb|ARAV01000010.1| 31648 31037 -1 - 612 hypothetical protein - none -
fig|6666666.65904.peg.1035 CDS gi|481785064|gb|ARAV01000010.1| 33080 31662 -2 - 1419 probable oxidoreductase - none -
fig|6666666.65904.peg.1036 CDS gi|481785064|gb|ARAV01000010.1| 34256 33318 -2 - 939 hypothetical protein - none -
fig|6666666.65904.peg.1037 CDS gi|481785064|gb|ARAV01000010.1| 34399 34881 1 + 483 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.1038 CDS gi|481785064|gb|ARAV01000010.1| 35557 34901 -1 - 657 Response regulator CitB of citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.65904.peg.1039 CDS gi|481785064|gb|ARAV01000010.1| 37205 35559 -2 - 1647 Signal transduction histidine kinase CitA regulating citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.65904.peg.1040 CDS gi|481785064|gb|ARAV01000010.1| 37476 39023 3 + 1548 CitH citrate transporter Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.65904.peg.1041 CDS gi|481785064|gb|ARAV01000010.1| 39136 39804 1 + 669 hypothetical protein - none -
fig|6666666.65904.peg.1042 CDS gi|481785064|gb|ARAV01000010.1| 39884 40444 2 + 561 hypothetical protein - none -
fig|6666666.65904.peg.1043 CDS gi|481785064|gb|ARAV01000010.1| 40534 41049 1 + 516 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65904.peg.1044 CDS gi|481785064|gb|ARAV01000010.1| 41055 41537 3 + 483 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.65904.peg.1045 CDS gi|481785064|gb|ARAV01000010.1| 41530 42117 1 + 588 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65904.peg.1046 CDS gi|481785064|gb|ARAV01000010.1| 42135 42803 3 + 669 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.65904.peg.1047 CDS gi|481785064|gb|ARAV01000010.1| 42806 43432 2 + 627 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65904.peg.1048 CDS gi|481785064|gb|ARAV01000010.1| 43429 44277 1 + 849 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65904.peg.1049 CDS gi|481785064|gb|ARAV01000010.1| 44750 44331 -2 - 420 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65904.peg.1050 CDS gi|481785064|gb|ARAV01000010.1| 45818 45117 -2 - 702 FIG00545464: hypothetical protein - none -
fig|6666666.65904.peg.1051 CDS gi|481785064|gb|ARAV01000010.1| 46817 45870 -2 - 948 Oxidoreductase, aldo/keto reductase family - none -
fig|6666666.65904.peg.1052 CDS gi|481785064|gb|ARAV01000010.1| 47568 47026 -3 - 543 ChrB domain protein - none -
fig|6666666.65904.peg.1053 CDS gi|481785064|gb|ARAV01000010.1| 47658 50174 3 + 2517 hypothetical protein - none -
fig|6666666.65904.peg.1054 CDS gi|481785064|gb|ARAV01000010.1| 50263 50889 1 + 627 hypothetical protein - none -
fig|6666666.65904.peg.1055 CDS gi|481785064|gb|ARAV01000010.1| 51116 50886 -2 - 231 hypothetical protein - none -
fig|6666666.65904.peg.1056 CDS gi|481785064|gb|ARAV01000010.1| 52119 51775 -3 - 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65904.peg.1057 CDS gi|481785064|gb|ARAV01000010.1| 54737 52122 -2 - 2616 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65904.peg.1058 CDS gi|481785064|gb|ARAV01000010.1| 54934 55104 1 + 171 hypothetical protein - none -
fig|6666666.65904.peg.1059 CDS gi|481785064|gb|ARAV01000010.1| 55101 55388 3 + 288 Death on curing protein, Doc toxin - none -
fig|6666666.65904.peg.1060 CDS gi|481785064|gb|ARAV01000010.1| 55616 56068 2 + 453 hypothetical protein - none -
fig|6666666.65904.peg.1061 CDS gi|481785064|gb|ARAV01000010.1| 56699 56073 -2 - 627 DNA double-strand break repair protein Mre11 - none -
fig|6666666.65904.peg.1062 CDS gi|481785064|gb|ARAV01000010.1| 57224 56718 -2 - 507 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65904.peg.1063 CDS gi|481785064|gb|ARAV01000010.1| 57753 57235 -3 - 519 NADH-FMN oxidoreductase - none -
fig|6666666.65904.peg.1064 CDS gi|481785064|gb|ARAV01000010.1| 58644 57865 -3 - 780 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component - none -
fig|6666666.65904.peg.1065 CDS gi|481785064|gb|ARAV01000010.1| 59679 58645 -3 - 1035 Substrate-binding region of ABC-type glycine betaine transport system - none -
fig|6666666.65904.peg.1066 CDS gi|481785064|gb|ARAV01000010.1| 60569 59685 -2 - 885 taurine transport system permease protein - none -
fig|6666666.65904.peg.1067 CDS gi|481785064|gb|ARAV01000010.1| 61741 60566 -1 - 1176 Alkanesulfonate monooxygenase (EC 1.14.14.5) Alkanesulfonates Utilization
fig|6666666.65904.peg.1068 CDS gi|481785064|gb|ARAV01000010.1| 62056 63069 1 + 1014 possible transcriptional regulator, ROK family - none -
fig|6666666.65904.peg.1069 CDS gi|481785064|gb|ARAV01000010.1| 64291 63083 -1 - 1209 probable dibenzothiophene desulfurization enzyme - none -
fig|6666666.65904.peg.1070 CDS gi|481785064|gb|ARAV01000010.1| 65490 64288 -3 - 1203 probable dibenzothiophene desulfurization enzyme - none -
fig|6666666.65904.peg.1071 CDS gi|481785064|gb|ARAV01000010.1| 66908 65487 -2 - 1422 probable dibenzothiophene desulfurization enzyme - none -
fig|6666666.65904.peg.1072 CDS gi|481785064|gb|ARAV01000010.1| 69152 67083 -2 - 2070 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65904.peg.1073 CDS gi|481785064|gb|ARAV01000010.1| 69921 69292 -3 - 630 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65904.peg.1074 CDS gi|481785064|gb|ARAV01000010.1| 71099 69921 -2 - 1179 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65904.peg.1075 CDS gi|481785064|gb|ARAV01000010.1| 72351 71161 -3 - 1191 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65904.peg.1076 CDS gi|481785064|gb|ARAV01000010.1| 74636 72999 -2 - 1638 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65904.peg.1077 CDS gi|481785064|gb|ARAV01000010.1| 75138 75272 3 + 135 hypothetical protein - none -
fig|6666666.65904.peg.1078 CDS gi|481785064|gb|ARAV01000010.1| 75535 75672 1 + 138 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.65904.peg.1079 CDS gi|481785064|gb|ARAV01000010.1| 76345 77319 1 + 975 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster
fig|6666666.65904.peg.1080 CDS gi|481785064|gb|ARAV01000010.1| 77473 78105 1 + 633 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.65904.peg.1081 CDS gi|481785064|gb|ARAV01000010.1| 78196 79188 1 + 993 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65904.peg.1082 CDS gi|481785064|gb|ARAV01000010.1| 79189 80340 1 + 1152 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65904.peg.1083 CDS gi|481785064|gb|ARAV01000010.1| 80390 81043 2 + 654 FIG007808: hypothetical protein - none -
fig|6666666.65904.peg.1084 CDS gi|481785064|gb|ARAV01000010.1| 81116 82663 2 + 1548 hypothetical protein - none -
fig|6666666.65904.peg.1085 CDS gi|481785064|gb|ARAV01000010.1| 83766 82660 -3 - 1107 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.65904.peg.1086 CDS gi|481785064|gb|ARAV01000010.1| 84280 83942 -1 - 339 Thioredoxin - none -
fig|6666666.65904.peg.1087 CDS gi|481785064|gb|ARAV01000010.1| 85243 84317 -1 - 927 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.65904.peg.1088 CDS gi|481785064|gb|ARAV01000010.1| 85934 85353 -2 - 582 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.65904.peg.1089 CDS gi|481785064|gb|ARAV01000010.1| 89441 86082 -2 - 3360 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65904.peg.1090 CDS gi|481785064|gb|ARAV01000010.1| 92294 89691 -2 - 2604 probable secreted protein. - none -
fig|6666666.65904.peg.1091 CDS gi|481785064|gb|ARAV01000010.1| 93688 92342 -1 - 1347 MutT/nudix family protein - none -
fig|6666666.65904.peg.1092 CDS gi|481785064|gb|ARAV01000010.1| 93687 94979 3 + 1293 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65904.peg.1093 CDS gi|481785064|gb|ARAV01000010.1| 94972 95580 1 + 609 Putative transcriptional regulator - none -
fig|6666666.65904.peg.1094 CDS gi|481785064|gb|ARAV01000010.1| 95580 96338 3 + 759 Branched-chain amino acid transport protein azlC - none -
fig|6666666.65904.peg.1095 CDS gi|481785064|gb|ARAV01000010.1| 96339 96680 3 + 342 hypothetical membrane protein - none -
fig|6666666.65904.peg.1096 CDS gi|481785064|gb|ARAV01000010.1| 97067 96762 -2 - 306 hypothetical protein - none -
fig|6666666.65904.peg.1097 CDS gi|481785064|gb|ARAV01000010.1| 98062 97085 -1 - 978 Sodium - Bile acid symporter CBSS-349102.4.peg.3442
fig|6666666.65904.peg.1098 CDS gi|481785064|gb|ARAV01000010.1| 98086 99168 1 + 1083 NADH-dependent flavin oxidoreductase - none -
fig|6666666.65904.peg.1099 CDS gi|481785064|gb|ARAV01000010.1| 100762 99173 -1 - 1590 putative ABC transporter - none -
fig|6666666.65904.peg.1100 CDS gi|481785064|gb|ARAV01000010.1| 101643 100759 -3 - 885 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.1101 CDS gi|481785064|gb|ARAV01000010.1| 102452 101631 -2 - 822 regulatory protein, MerR - none -
fig|6666666.65904.peg.1102 CDS gi|481785064|gb|ARAV01000010.1| 103056 102505 -3 - 552 hypothetical protein - none -
fig|6666666.65904.peg.1103 CDS gi|481785064|gb|ARAV01000010.1| 103983 103141 -3 - 843 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65904.peg.1104 CDS gi|481785064|gb|ARAV01000010.1| 105228 103987 -3 - 1242 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65904.peg.1105 CDS gi|481785064|gb|ARAV01000010.1| 106681 105260 -1 - 1422 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65904.peg.1106 CDS gi|481785064|gb|ARAV01000010.1| 107702 106674 -2 - 1029 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65904.peg.1107 CDS gi|481785064|gb|ARAV01000010.1| 108344 107709 -2 - 636 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65904.peg.1108 CDS gi|481785064|gb|ARAV01000010.1| 109909 108341 -1 - 1569 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65904.peg.1109 CDS gi|481785064|gb|ARAV01000010.1| 110635 110159 -1 - 477 putative tryptophan transpoter - none -
fig|6666666.65904.peg.1110 CDS gi|481785064|gb|ARAV01000010.1| 110722 111030 1 + 309 hypothetical protein - none -
fig|6666666.65904.peg.1111 CDS gi|481785064|gb|ARAV01000010.1| 111667 111053 -1 - 615 Amidases related to nicotinamidase NAD and NADP cofactor biosynthesis global
fig|6666666.65904.peg.1112 CDS gi|481785064|gb|ARAV01000010.1| 111735 112727 3 + 993 Transcriptional regulator, AraC family - none -
fig|6666666.65904.peg.1113 CDS gi|481785064|gb|ARAV01000010.1| 112913 114190 2 + 1278 putative transmembrane symporter - none -
fig|6666666.65904.peg.1114 CDS gi|481785064|gb|ARAV01000010.1| 114422 114733 2 + 312 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Iron-sulfur cluster assembly;
Soluble cytochromes and functionally related electron carriers
fig|6666666.65904.peg.1115 CDS gi|481785064|gb|ARAV01000010.1| 115518 114730 -3 - 789 FIG00547443: hypothetical protein - none -
fig|6666666.65904.peg.1116 CDS gi|481785064|gb|ARAV01000010.1| 116873 115533 -2 - 1341 Putative ABC transport system permease protein - none -
fig|6666666.65904.peg.1117 CDS gi|481785064|gb|ARAV01000010.1| 117984 116875 -3 - 1110 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.65904.peg.1118 CDS gi|481785064|gb|ARAV01000010.1| 118277 120286 2 + 2010 hypothetical protein - none -
fig|6666666.65904.peg.1119 CDS gi|481785064|gb|ARAV01000010.1| 123032 120615 -2 - 2418 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65904.peg.1120 CDS gi|481785064|gb|ARAV01000010.1| 123411 123010 -3 - 402 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.65904.peg.1121 CDS gi|481785064|gb|ARAV01000010.1| 123504 123929 3 + 426 COG1765: Predicted redox protein, regulator of disulfide bond formation - none -
fig|6666666.65904.peg.1122 CDS gi|481785068|gb|ARAV01000009.1| 393 277 -3 - 117 hypothetical protein - none -
fig|6666666.65904.peg.1123 CDS gi|481785068|gb|ARAV01000009.1| 544 678 1 + 135 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65904.peg.1124 CDS gi|481785068|gb|ARAV01000009.1| 1042 641 -1 - 402 hypothetical protein - none -
fig|6666666.65904.peg.1125 CDS gi|481785068|gb|ARAV01000009.1| 1041 2789 3 + 1749 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.65904.peg.1126 CDS gi|481785068|gb|ARAV01000009.1| 2867 3133 2 + 267 Phosphocarrier protein of PTS system - none -
fig|6666666.65904.peg.1127 CDS gi|481785068|gb|ARAV01000009.1| 4500 3208 -3 - 1293 xanthine/uracil permeases - none -
fig|6666666.65904.peg.1128 CDS gi|481785068|gb|ARAV01000009.1| 6065 4509 -2 - 1557 GTP-binding protein HflX Hfl operon
fig|6666666.65904.peg.1129 CDS gi|481785068|gb|ARAV01000009.1| 6207 6953 3 + 747 FIG00546075: hypothetical protein - none -
fig|6666666.65904.peg.1130 CDS gi|481785068|gb|ARAV01000009.1| 6977 7495 2 + 519 hypothetical protein - none -
fig|6666666.65904.peg.1131 CDS gi|481785068|gb|ARAV01000009.1| 8292 7492 -3 - 801 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.1132 CDS gi|481785068|gb|ARAV01000009.1| 9191 8289 -2 - 903 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.65904.peg.1133 CDS gi|481785068|gb|ARAV01000009.1| 9784 9188 -1 - 597 FIG00545147: hypothetical protein - none -
fig|6666666.65904.peg.1134 CDS gi|481785068|gb|ARAV01000009.1| 9951 11321 3 + 1371 ATPase involved in DNA repair - none -
fig|6666666.65904.peg.1135 CDS gi|481785068|gb|ARAV01000009.1| 11324 12427 2 + 1104 No significant database matches - none -
fig|6666666.65904.peg.1136 CDS gi|481785068|gb|ARAV01000009.1| 13269 12424 -3 - 846 hypothetical protein - none -
fig|6666666.65904.peg.1137 CDS gi|481785068|gb|ARAV01000009.1| 14137 13457 -1 - 681 hypothetical protein - none -
fig|6666666.65904.peg.1138 CDS gi|481785068|gb|ARAV01000009.1| 15750 14236 -3 - 1515 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster
fig|6666666.65904.peg.1139 CDS gi|481785068|gb|ARAV01000009.1| 15948 16676 3 + 729 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.65904.peg.1140 CDS gi|481785068|gb|ARAV01000009.1| 16702 17589 1 + 888 glutamate-binding protein GluB - none -
fig|6666666.65904.peg.1141 CDS gi|481785068|gb|ARAV01000009.1| 17620 18306 1 + 687 glutamate ABC-type transporter, permease component - none -
fig|6666666.65904.peg.1142 CDS gi|481785068|gb|ARAV01000009.1| 18306 19244 3 + 939 glutamate transporter permease protein GluD - none -
fig|6666666.65904.peg.1143 CDS gi|481785068|gb|ARAV01000009.1| 19923 19336 -3 - 588 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65904.peg.1144 CDS gi|481785068|gb|ARAV01000009.1| 21068 19929 -2 - 1140 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65904.peg.1145 CDS gi|481785068|gb|ARAV01000009.1| 21075 21227 3 + 153 hypothetical protein - none -
fig|6666666.65904.peg.1146 CDS gi|481785068|gb|ARAV01000009.1| 21523 21308 -1 - 216 hypothetical protein - none -
fig|6666666.65904.peg.1147 CDS gi|481785068|gb|ARAV01000009.1| 21600 22181 3 + 582 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65904.peg.1148 CDS gi|481785068|gb|ARAV01000009.1| 22193 22882 2 + 690 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65904.peg.1149 CDS gi|481785068|gb|ARAV01000009.1| 22879 23493 1 + 615 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65904.peg.1150 CDS gi|481785068|gb|ARAV01000009.1| 24392 23562 -2 - 831 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65904.peg.1151 CDS gi|481785068|gb|ARAV01000009.1| 24842 24480 -2 - 363 putative transcription regulator - none -
fig|6666666.65904.peg.1152 CDS gi|481785068|gb|ARAV01000009.1| 25405 24866 -1 - 540 Protein Implicated in DNA repair function with RecA and MutS DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.65904.peg.1153 CDS gi|481785068|gb|ARAV01000009.1| 25961 25398 -2 - 564 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.1154 CDS gi|481785068|gb|ARAV01000009.1| 26052 26345 3 + 294 FIG00544062: hypothetical protein - none -
fig|6666666.65904.peg.1155 CDS gi|481785068|gb|ARAV01000009.1| 27600 26425 -3 - 1176 Integral membrane protein TerC - none -
fig|6666666.65904.peg.1156 CDS gi|481785068|gb|ARAV01000009.1| 27867 29615 3 + 1749 Sulfate transporter - none -
fig|6666666.65904.peg.1157 CDS gi|481785068|gb|ARAV01000009.1| 32608 29612 -1 - 2997 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65904.peg.1158 CDS gi|481785068|gb|ARAV01000009.1| 33402 32797 -3 - 606 hypothetical protein - none -
fig|6666666.65904.peg.1159 CDS gi|481785068|gb|ARAV01000009.1| 35461 33440 -1 - 2022 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.65904.peg.1160 CDS gi|481785068|gb|ARAV01000009.1| 36372 35464 -3 - 909 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65904.peg.1161 CDS gi|481785068|gb|ARAV01000009.1| 37362 36604 -3 - 759 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65904.peg.1162 CDS gi|481785068|gb|ARAV01000009.1| 38151 37405 -3 - 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65904.peg.1163 CDS gi|481785068|gb|ARAV01000009.1| 38286 38681 3 + 396 Lactoylglutathione lyase and related lyases - none -
fig|6666666.65904.peg.1164 CDS gi|481785068|gb|ARAV01000009.1| 39820 38678 -1 - 1143 D-serine dehydratase (EC 4.3.1.18) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65904.peg.1165 CDS gi|481785068|gb|ARAV01000009.1| 39954 40562 3 + 609 No significant database matches - none -
fig|6666666.65904.peg.1166 CDS gi|481785068|gb|ARAV01000009.1| 42896 40629 -2 - 2268 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65904.peg.1167 CDS gi|481785068|gb|ARAV01000009.1| 44097 43012 -3 - 1086 hypothetical protein - none -
fig|6666666.65904.peg.1168 CDS gi|481785068|gb|ARAV01000009.1| 44438 44169 -2 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.65904.peg.1169 CDS gi|481785068|gb|ARAV01000009.1| 45531 44584 -3 - 948 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65904.peg.1170 CDS gi|481785068|gb|ARAV01000009.1| 46588 45611 -1 - 978 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65904.peg.1171 CDS gi|481785068|gb|ARAV01000009.1| 46619 47512 2 + 894 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses
fig|6666666.65904.peg.1172 CDS gi|481785068|gb|ARAV01000009.1| 48163 47507 -1 - 657 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.65904.peg.1173 CDS gi|481785068|gb|ARAV01000009.1| 48960 48163 -3 - 798 putative SimX4 homolog - none -
fig|6666666.65904.peg.1174 CDS gi|481785068|gb|ARAV01000009.1| 50265 48964 -3 - 1302 putative DNA-damage-inducible protein F - none -
fig|6666666.65904.peg.1175 CDS gi|481785068|gb|ARAV01000009.1| 51227 50262 -2 - 966 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.65904.peg.1176 CDS gi|481785068|gb|ARAV01000009.1| 51668 51228 -2 - 441 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65904.peg.1177 CDS gi|481785068|gb|ARAV01000009.1| 51898 52020 1 + 123 hypothetical protein - none -
fig|6666666.65904.peg.1178 CDS gi|481785068|gb|ARAV01000009.1| 52024 53703 1 + 1680 hypothetical protein - none -
fig|6666666.65904.peg.1179 CDS gi|481785068|gb|ARAV01000009.1| 56639 53700 -2 - 2940 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65904.peg.1180 CDS gi|481785068|gb|ARAV01000009.1| 58188 57181 -3 - 1008 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65904.peg.1181 CDS gi|481785068|gb|ARAV01000009.1| 58761 58201 -3 - 561 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65904.peg.1182 CDS gi|481785068|gb|ARAV01000009.1| 58864 59613 1 + 750 hypothetical protein - none -
fig|6666666.65904.peg.1183 CDS gi|481785068|gb|ARAV01000009.1| 59808 60959 3 + 1152 Ornithine cyclodeaminase (EC 4.3.1.12) Arginine and Ornithine Degradation
fig|6666666.65904.peg.1184 CDS gi|481785068|gb|ARAV01000009.1| 61000 62436 1 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1185 CDS gi|481785068|gb|ARAV01000009.1| 62526 63587 3 + 1062 hypothetical protein - none -
fig|6666666.65904.peg.1186 CDS gi|481785068|gb|ARAV01000009.1| 65387 63630 -2 - 1758 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65904.peg.1187 CDS gi|481785068|gb|ARAV01000009.1| 65428 66138 1 + 711 UPF0246 protein YaaA - none -
fig|6666666.65904.peg.1188 CDS gi|481785068|gb|ARAV01000009.1| 66173 67294 2 + 1122 COG family: RecA-superfamily ATPases implicated in signal transduction - none -
fig|6666666.65904.peg.1189 CDS gi|481785068|gb|ARAV01000009.1| 68613 67291 -3 - 1323 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.65904.peg.1190 CDS gi|481785068|gb|ARAV01000009.1| 69191 68613 -2 - 579 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism
fig|6666666.65904.peg.1191 CDS gi|481785068|gb|ARAV01000009.1| 70243 69194 -1 - 1050 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.65904.peg.1192 CDS gi|481785068|gb|ARAV01000009.1| 71386 70406 -1 - 981 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) ## LSU rRNA m2G1835 RNA methylation
fig|6666666.65904.peg.1193 CDS gi|481785068|gb|ARAV01000009.1| 72110 71373 -2 - 738 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.1194 CDS gi|481785068|gb|ARAV01000009.1| 72135 73262 3 + 1128 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.65904.peg.1195 CDS gi|481785068|gb|ARAV01000009.1| 74142 73267 -3 - 876 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.65904.peg.1196 CDS gi|481785068|gb|ARAV01000009.1| 75717 74218 -3 - 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65904.peg.1197 CDS gi|481785068|gb|ARAV01000009.1| 76004 75762 -2 - 243 hypothetical protein - none -
fig|6666666.65904.peg.1198 CDS gi|481785068|gb|ARAV01000009.1| 75996 76991 3 + 996 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65904.peg.1199 CDS gi|481785068|gb|ARAV01000009.1| 77073 78488 3 + 1416 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65904.peg.1200 CDS gi|481785068|gb|ARAV01000009.1| 78801 79178 3 + 378 hypothetical membrane protein - none -
fig|6666666.65904.peg.1201 CDS gi|481785068|gb|ARAV01000009.1| 79208 79615 2 + 408 hypothetical protein - none -
fig|6666666.65904.peg.1202 CDS gi|481785068|gb|ARAV01000009.1| 80508 79624 -3 - 885 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65904.peg.1203 CDS gi|481785068|gb|ARAV01000009.1| 82355 80505 -2 - 1851 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1204 CDS gi|481785068|gb|ARAV01000009.1| 83580 82417 -3 - 1164 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65904.peg.1205 CDS gi|481785068|gb|ARAV01000009.1| 84851 83640 -2 - 1212 Membrane-associated zinc metalloprotease - none -
fig|6666666.65904.peg.1206 CDS gi|481785068|gb|ARAV01000009.1| 86063 84882 -2 - 1182 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65904.peg.1207 CDS gi|481785068|gb|ARAV01000009.1| 86195 86617 2 + 423 hypothetical membrane protein - none -
fig|6666666.65904.peg.1208 CDS gi|481785068|gb|ARAV01000009.1| 87795 86677 -3 - 1119 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.65904.peg.1209 CDS gi|481785068|gb|ARAV01000009.1| 87997 88284 1 + 288 FIG00544474: hypothetical protein - none -
fig|6666666.65904.peg.1210 CDS gi|481785068|gb|ARAV01000009.1| 89193 88285 -3 - 909 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.1211 CDS gi|481785068|gb|ARAV01000009.1| 89806 89249 -1 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65904.peg.1212 CDS gi|481785068|gb|ARAV01000009.1| 90623 89895 -2 - 729 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65904.peg.1213 CDS gi|481785068|gb|ARAV01000009.1| 91647 90820 -3 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65904.peg.1214 CDS gi|481785068|gb|ARAV01000009.1| 92686 91829 -1 - 858 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.65904.peg.1215 CDS gi|481785068|gb|ARAV01000009.1| 94460 93534 -2 - 927 Tyrosine recombinase XerC - none -
fig|6666666.65904.peg.1216 CDS gi|481785068|gb|ARAV01000009.1| 95691 94498 -3 - 1194 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65904.peg.1217 CDS gi|481785068|gb|ARAV01000009.1| 97211 95688 -2 - 1524 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65904.peg.1218 CDS gi|481785068|gb|ARAV01000009.1| 97566 97198 -3 - 369 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.65904.peg.1219 CDS gi|481785068|gb|ARAV01000009.1| 98007 97699 -3 - 309 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65904.peg.1220 CDS gi|481785068|gb|ARAV01000009.1| 98654 98004 -2 - 651 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.65904.peg.1221 CDS gi|481785068|gb|ARAV01000009.1| 99402 98656 -3 - 747 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65904.peg.1222 CDS gi|481785068|gb|ARAV01000009.1| 100380 99538 -3 - 843 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.65904.peg.1223 CDS gi|481785068|gb|ARAV01000009.1| 101786 100461 -2 - 1326 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.1224 CDS gi|481785068|gb|ARAV01000009.1| 101891 103192 2 + 1302 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65904.peg.1225 CDS gi|481785068|gb|ARAV01000009.1| 103301 105379 2 + 2079 Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) - none -
fig|6666666.65904.peg.1226 CDS gi|481785068|gb|ARAV01000009.1| 105473 108076 2 + 2604 Phage infection protein - none -
fig|6666666.65904.peg.1227 CDS gi|481785068|gb|ARAV01000009.1| 108073 110292 1 + 2220 hypothetical protein - none -
fig|6666666.65904.peg.1228 CDS gi|481785068|gb|ARAV01000009.1| 110768 110421 -2 - 348 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65904.peg.1229 CDS gi|481785068|gb|ARAV01000009.1| 111078 111728 3 + 651 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65904.peg.1230 CDS gi|481785068|gb|ARAV01000009.1| 111721 112851 1 + 1131 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65904.peg.1231 CDS gi|481785068|gb|ARAV01000009.1| 112848 113045 3 + 198 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.65904.peg.1232 CDS gi|481785068|gb|ARAV01000009.1| 113048 113830 2 + 783 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65904.peg.1233 CDS gi|481785068|gb|ARAV01000009.1| 113833 114927 1 + 1095 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65904.peg.1234 CDS gi|481785068|gb|ARAV01000009.1| 117242 114924 -2 - 2319 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65904.peg.1235 CDS gi|481785068|gb|ARAV01000009.1| 118590 117352 -3 - 1239 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.65904.peg.1236 CDS gi|481785068|gb|ARAV01000009.1| 118703 119203 2 + 501 hypothetical protein - none -
fig|6666666.65904.peg.1237 CDS gi|481785068|gb|ARAV01000009.1| 119206 119790 1 + 585 probable transcriptional regulator - none -
fig|6666666.65904.peg.1238 CDS gi|481785068|gb|ARAV01000009.1| 120646 119765 -1 - 882 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) - none -
fig|6666666.65904.peg.1239 CDS gi|481785068|gb|ARAV01000009.1| 122191 120674 -1 - 1518 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) - none -
fig|6666666.65904.peg.1240 CDS gi|481785068|gb|ARAV01000009.1| 122169 122288 3 + 120 hypothetical protein - none -
fig|6666666.65904.peg.1241 CDS gi|481785068|gb|ARAV01000009.1| 122448 125024 3 + 2577 Protein acetyltransferase Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.1242 CDS gi|481785068|gb|ARAV01000009.1| 125035 126189 1 + 1155 NAD-independent protein deacetylase AcuC Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.1243 CDS gi|481785068|gb|ARAV01000009.1| 126981 126202 -3 - 780 3-hydroxyacyl-CoA dehydrogenase - none -
fig|6666666.65904.peg.1244 CDS gi|481785068|gb|ARAV01000009.1| 128190 126991 -3 - 1200 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.65904.peg.1245 CDS gi|481785068|gb|ARAV01000009.1| 128388 128951 3 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.1246 CDS gi|481785068|gb|ARAV01000009.1| 129250 129050 -1 - 201 Mobile element protein - none -
fig|6666666.65904.peg.1247 CDS gi|481785072|gb|ARAV01000008.1| 2405 1572 -2 - 834 hypothetical protein - none -
fig|6666666.65904.peg.1248 CDS gi|481785072|gb|ARAV01000008.1| 3001 3162 1 + 162 hypothetical protein - none -
fig|6666666.65904.peg.1249 CDS gi|481785072|gb|ARAV01000008.1| 3263 3856 2 + 594 hypothetical protein - none -
fig|6666666.65904.peg.1250 CDS gi|481785072|gb|ARAV01000008.1| 3859 4995 1 + 1137 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65904.peg.1251 CDS gi|481785072|gb|ARAV01000008.1| 5022 5921 3 + 900 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65904.peg.1252 CDS gi|481785072|gb|ARAV01000008.1| 6991 5918 -1 - 1074 Abortive infection bacteriophage resistance protein - none -
fig|6666666.65904.peg.1253 CDS gi|481785072|gb|ARAV01000008.1| 7233 8168 3 + 936 Auxin Efflux Carrier - none -
fig|6666666.65904.peg.1254 CDS gi|481785072|gb|ARAV01000008.1| 8501 8178 -2 - 324 FIG00544880: hypothetical protein - none -
fig|6666666.65904.peg.1255 CDS gi|481785072|gb|ARAV01000008.1| 8557 8841 1 + 285 hypothetical protein - none -
fig|6666666.65904.peg.1256 CDS gi|481785072|gb|ARAV01000008.1| 9155 8838 -2 - 318 FIG00545941: hypothetical protein - none -
fig|6666666.65904.peg.1257 CDS gi|481785072|gb|ARAV01000008.1| 10550 9477 -2 - 1074 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65904.peg.1258 CDS gi|481785072|gb|ARAV01000008.1| 12277 10616 -1 - 1662 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65904.peg.1259 CDS gi|481785072|gb|ARAV01000008.1| 13051 12287 -1 - 765 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65904.peg.1260 CDS gi|481785072|gb|ARAV01000008.1| 13641 13075 -3 - 567 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65904.peg.1261 CDS gi|481785072|gb|ARAV01000008.1| 14251 13643 -1 - 609 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.65904.peg.1262 CDS gi|481785072|gb|ARAV01000008.1| 15583 14258 -1 - 1326 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.1263 CDS gi|481785072|gb|ARAV01000008.1| 15950 15636 -2 - 315 Quaternary ammonium compound-resistance protein SugE - none -
fig|6666666.65904.peg.1264 CDS gi|481785072|gb|ARAV01000008.1| 16827 16063 -3 - 765 FIG00945547: hypothetical protein - none -
fig|6666666.65904.peg.1265 CDS gi|481785072|gb|ARAV01000008.1| 18215 16839 -2 - 1377 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.1266 CDS gi|481785072|gb|ARAV01000008.1| 19292 18237 -2 - 1056 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.1267 CDS gi|481785072|gb|ARAV01000008.1| 19679 19329 -2 - 351 hypothetical protein - none -
fig|6666666.65904.peg.1268 CDS gi|481785072|gb|ARAV01000008.1| 20517 19690 -3 - 828 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65904.peg.1269 CDS gi|481785072|gb|ARAV01000008.1| 23205 20614 -3 - 2592 FUPA26 P-type ATPase - none -
fig|6666666.65904.peg.1270 CDS gi|481785072|gb|ARAV01000008.1| 23730 23248 -3 - 483 hypothetical membrane protein - none -
fig|6666666.65904.peg.1271 CDS gi|481785072|gb|ARAV01000008.1| 24401 23730 -2 - 672 hypothetical membrane protein - none -
fig|6666666.65904.peg.1272 CDS gi|481785072|gb|ARAV01000008.1| 25396 24398 -1 - 999 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.65904.peg.1273 CDS gi|481785072|gb|ARAV01000008.1| 27149 25440 -2 - 1710 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.1274 CDS gi|481785072|gb|ARAV01000008.1| 27820 27491 -1 - 330 hypothetical protein - none -
fig|6666666.65904.peg.1275 CDS gi|481785072|gb|ARAV01000008.1| 28734 27853 -3 - 882 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.1276 CDS gi|481785072|gb|ARAV01000008.1| 30063 28735 -3 - 1329 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.1277 CDS gi|481785072|gb|ARAV01000008.1| 30392 30150 -2 - 243 Glutaredoxin-like domain protein - none -
fig|6666666.65904.peg.1278 CDS gi|481785072|gb|ARAV01000008.1| 30489 31529 3 + 1041 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.1279 CDS gi|481785072|gb|ARAV01000008.1| 32145 31954 -3 - 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65904.peg.1280 CDS gi|481785072|gb|ARAV01000008.1| 33104 32289 -2 - 816 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65904.peg.1281 CDS gi|481785072|gb|ARAV01000008.1| 34107 33145 -3 - 963 Putative membrane protein - none -
fig|6666666.65904.peg.1282 CDS gi|481785072|gb|ARAV01000008.1| 34968 34108 -3 - 861 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65904.peg.1283 CDS gi|481785072|gb|ARAV01000008.1| 35099 35965 2 + 867 FIG00543972: hypothetical protein - none -
fig|6666666.65904.peg.1284 CDS gi|481785072|gb|ARAV01000008.1| 36682 35990 -1 - 693 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65904.peg.1285 CDS gi|481785072|gb|ARAV01000008.1| 37932 36679 -3 - 1254 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65904.peg.1286 CDS gi|481785072|gb|ARAV01000008.1| 38712 37966 -3 - 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65904.peg.1287 CDS gi|481785072|gb|ARAV01000008.1| 40029 38764 -3 - 1266 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65904.peg.1288 CDS gi|481785072|gb|ARAV01000008.1| 40738 40097 -1 - 642 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.65904.peg.1289 CDS gi|481785072|gb|ARAV01000008.1| 42378 40735 -3 - 1644 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.65904.peg.1290 CDS gi|481785072|gb|ARAV01000008.1| 43181 42378 -2 - 804 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.65904.peg.1291 CDS gi|481785072|gb|ARAV01000008.1| 43432 44934 1 + 1503 hypothetical protein - none -
fig|6666666.65904.peg.1292 CDS gi|481785072|gb|ARAV01000008.1| 45045 46757 3 + 1713 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.1293 CDS gi|481785072|gb|ARAV01000008.1| 46857 48566 3 + 1710 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.1294 CDS gi|481785072|gb|ARAV01000008.1| 48884 50485 2 + 1602 Putative oxidase - none -
fig|6666666.65904.peg.1295 CDS gi|481785072|gb|ARAV01000008.1| 50491 50751 1 + 261 hypothetical protein - none -
fig|6666666.65904.peg.1296 CDS gi|481785072|gb|ARAV01000008.1| 50921 59950 2 + 9030 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65904.peg.1297 CDS gi|481785072|gb|ARAV01000008.1| 60268 60032 -1 - 237 hypothetical protein - none -
fig|6666666.65904.peg.1298 CDS gi|481785072|gb|ARAV01000008.1| 60505 61524 1 + 1020 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.65904.peg.1299 CDS gi|481785072|gb|ARAV01000008.1| 61626 62912 3 + 1287 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.65904.peg.1300 CDS gi|481785072|gb|ARAV01000008.1| 62996 64012 2 + 1017 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.65904.peg.1301 CDS gi|481785072|gb|ARAV01000008.1| 64013 64849 2 + 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.65904.peg.1302 CDS gi|481785072|gb|ARAV01000008.1| 65931 64846 -3 - 1086 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65904.peg.1303 CDS gi|481785072|gb|ARAV01000008.1| 65956 66447 1 + 492 FIG00546961: hypothetical protein - none -
fig|6666666.65904.peg.1304 CDS gi|481785072|gb|ARAV01000008.1| 66468 67283 3 + 816 Methylase of polypeptide chain release factors - none -
fig|6666666.65904.peg.1305 CDS gi|481785072|gb|ARAV01000008.1| 67298 68134 2 + 837 hypothetical protein - none -
fig|6666666.65904.peg.1306 CDS gi|481785072|gb|ARAV01000008.1| 68642 68103 -2 - 540 No significant database matches - none -
fig|6666666.65904.peg.1307 CDS gi|481785072|gb|ARAV01000008.1| 68956 68648 -1 - 309 FIG00544701: hypothetical protein - none -
fig|6666666.65904.peg.1308 CDS gi|481785072|gb|ARAV01000008.1| 69586 68957 -1 - 630 hypothetical protein - none -
fig|6666666.65904.peg.1309 CDS gi|481785072|gb|ARAV01000008.1| 70945 69617 -1 - 1329 FIG00544632: hypothetical protein - none -
fig|6666666.65904.peg.1310 CDS gi|481785072|gb|ARAV01000008.1| 71429 71061 -2 - 369 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.65904.peg.1311 CDS gi|481785072|gb|ARAV01000008.1| 72256 71507 -1 - 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65904.peg.1312 CDS gi|481785072|gb|ARAV01000008.1| 74265 72256 -3 - 2010 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65904.peg.1313 CDS gi|481785072|gb|ARAV01000008.1| 75040 74282 -1 - 759 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65904.peg.1314 CDS gi|481785072|gb|ARAV01000008.1| 75506 76894 2 + 1389 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.65904.peg.1315 CDS gi|481785072|gb|ARAV01000008.1| 78373 76961 -1 - 1413 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65904.peg.1316 CDS gi|481785072|gb|ARAV01000008.1| 78879 80015 3 + 1137 FIG00544202: hypothetical protein - none -
fig|6666666.65904.peg.1317 CDS gi|481785072|gb|ARAV01000008.1| 80043 82010 3 + 1968 Putative prolyl oligopeptidase family protein - none -
fig|6666666.65904.peg.1318 CDS gi|481785072|gb|ARAV01000008.1| 82007 83344 2 + 1338 aminopeptidase N - none -
fig|6666666.65904.peg.1319 CDS gi|481785072|gb|ARAV01000008.1| 83361 84593 3 + 1233 putative conserved integral membrane protein - none -
fig|6666666.65904.peg.1320 CDS gi|481785072|gb|ARAV01000008.1| 85630 84554 -1 - 1077 No significant database matches - none -
fig|6666666.65904.peg.1321 CDS gi|481785072|gb|ARAV01000008.1| 85759 86745 1 + 987 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65904.peg.1322 CDS gi|481785072|gb|ARAV01000008.1| 86756 88111 2 + 1356 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.65904.peg.1323 CDS gi|481785072|gb|ARAV01000008.1| 88134 89006 3 + 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65904.peg.1324 CDS gi|481785072|gb|ARAV01000008.1| 89006 89806 2 + 801 FIG00546606: hypothetical protein - none -
fig|6666666.65904.peg.1325 CDS gi|481785072|gb|ARAV01000008.1| 89814 90509 3 + 696 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65904.peg.1326 CDS gi|481785072|gb|ARAV01000008.1| 90513 90860 3 + 348 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65904.peg.1327 CDS gi|481785072|gb|ARAV01000008.1| 90905 91771 2 + 867 Protein-disulfide isomerase - none -
fig|6666666.65904.peg.1328 CDS gi|481785072|gb|ARAV01000008.1| 92691 91783 -3 - 909 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.65904.peg.1329 CDS gi|481785072|gb|ARAV01000008.1| 93329 92703 -2 - 627 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.65904.peg.1330 CDS gi|481785072|gb|ARAV01000008.1| 94429 93329 -1 - 1101 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.65904.peg.1331 CDS gi|481785072|gb|ARAV01000008.1| 96493 94484 -1 - 2010 FIG00546273: hypothetical protein - none -
fig|6666666.65904.peg.1332 CDS gi|481785072|gb|ARAV01000008.1| 97549 96701 -1 - 849 Putative secreted hydrolase - none -
fig|6666666.65904.peg.1333 CDS gi|481785072|gb|ARAV01000008.1| 97854 99518 3 + 1665 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.1334 CDS gi|481785072|gb|ARAV01000008.1| 100667 99630 -2 - 1038 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.1335 CDS gi|481785072|gb|ARAV01000008.1| 102215 100998 -2 - 1218 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65904.peg.1336 CDS gi|481785072|gb|ARAV01000008.1| 102322 103797 1 + 1476 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65904.peg.1337 CDS gi|481785072|gb|ARAV01000008.1| 104546 103815 -2 - 732 hypothetical protein - none -
fig|6666666.65904.peg.1338 CDS gi|481785072|gb|ARAV01000008.1| 107513 104550 -2 - 2964 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65904.peg.1339 CDS gi|481785072|gb|ARAV01000008.1| 107823 108449 3 + 627 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65904.peg.1340 CDS gi|481785072|gb|ARAV01000008.1| 108737 108534 -2 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65904.peg.1341 CDS gi|481785072|gb|ARAV01000008.1| 108989 111334 2 + 2346 FIG00545284: hypothetical protein - none -
fig|6666666.65904.peg.1342 CDS gi|481785072|gb|ARAV01000008.1| 111654 111331 -3 - 324 hypothetical protein - none -
fig|6666666.65904.peg.1343 CDS gi|481785072|gb|ARAV01000008.1| 111944 111651 -2 - 294 Putative secreted protein - none -
fig|6666666.65904.peg.1344 CDS gi|481785072|gb|ARAV01000008.1| 112237 112019 -1 - 219 FIG043778: hypothetical protein CBSS-336982.3.peg.3874
fig|6666666.65904.peg.1345 CDS gi|481785072|gb|ARAV01000008.1| 112748 112281 -2 - 468 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.65904.peg.1346 CDS gi|481785072|gb|ARAV01000008.1| 113638 112871 -1 - 768 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.65904.peg.1347 CDS gi|481785072|gb|ARAV01000008.1| 114798 113638 -3 - 1161 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.65904.peg.1348 CDS gi|481785072|gb|ARAV01000008.1| 115832 114795 -2 - 1038 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.65904.peg.1349 CDS gi|481785072|gb|ARAV01000008.1| 116262 117086 3 + 825 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.1350 CDS gi|481785072|gb|ARAV01000008.1| 117791 117105 -2 - 687 hypothetical protein - none -
fig|6666666.65904.peg.1351 CDS gi|481785072|gb|ARAV01000008.1| 117929 118432 2 + 504 hypothetical protein - none -
fig|6666666.65904.peg.1352 CDS gi|481785072|gb|ARAV01000008.1| 118523 119452 2 + 930 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.65904.peg.1353 CDS gi|481785072|gb|ARAV01000008.1| 120670 119477 -1 - 1194 putative serine protease - none -
fig|6666666.65904.peg.1354 CDS gi|481785072|gb|ARAV01000008.1| 121541 120771 -2 - 771 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65904.peg.1355 CDS gi|481785072|gb|ARAV01000008.1| 122165 121560 -2 - 606 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.65904.peg.1356 CDS gi|481785072|gb|ARAV01000008.1| 123019 122162 -1 - 858 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65904.peg.1357 CDS gi|481785072|gb|ARAV01000008.1| 123461 124144 2 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65904.peg.1358 CDS gi|481785072|gb|ARAV01000008.1| 125049 124216 -3 - 834 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65904.peg.1359 CDS gi|481785072|gb|ARAV01000008.1| 125586 125125 -3 - 462 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65904.peg.1360 CDS gi|481785072|gb|ARAV01000008.1| 125741 125586 -2 - 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65904.peg.1361 CDS gi|481785072|gb|ARAV01000008.1| 126134 125760 -2 - 375 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65904.peg.1362 CDS gi|481785072|gb|ARAV01000008.1| 126369 128810 3 + 2442 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1363 CDS gi|481785072|gb|ARAV01000008.1| 129270 128818 -3 - 453 Transamidase GatB domain protein - none -
fig|6666666.65904.peg.1364 CDS gi|481785072|gb|ARAV01000008.1| 129306 130217 3 + 912 putative secreted protein - none -
fig|6666666.65904.peg.1365 CDS gi|481785072|gb|ARAV01000008.1| 130663 130842 1 + 180 hypothetical protein - none -
fig|6666666.65904.peg.1366 CDS gi|481785072|gb|ARAV01000008.1| 132287 130839 -2 - 1449 hypothetical protein - none -
fig|6666666.65904.peg.1367 CDS gi|481785072|gb|ARAV01000008.1| 132722 132345 -2 - 378 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65904.peg.1368 CDS gi|481785072|gb|ARAV01000008.1| 132979 132722 -1 - 258 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65904.peg.1369 CDS gi|481785072|gb|ARAV01000008.1| 133356 132976 -3 - 381 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65904.peg.1370 CDS gi|481785072|gb|ARAV01000008.1| 134864 133353 -2 - 1512 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65904.peg.1371 CDS gi|481785072|gb|ARAV01000008.1| 135283 134861 -1 - 423 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65904.peg.1372 CDS gi|481785072|gb|ARAV01000008.1| 138114 135280 -3 - 2835 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65904.peg.1373 CDS gi|481785072|gb|ARAV01000008.1| 140003 138450 -2 - 1554 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65904.peg.1374 CDS gi|481785072|gb|ARAV01000008.1| 140147 140689 2 + 543 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65904.peg.1375 CDS gi|481785072|gb|ARAV01000008.1| 140799 142079 3 + 1281 hypothetical protein - none -
fig|6666666.65904.peg.1376 CDS gi|481785072|gb|ARAV01000008.1| 143083 142076 -1 - 1008 hypothetical protein - none -
fig|6666666.65904.peg.1377 CDS gi|481785072|gb|ARAV01000008.1| 145045 143207 -1 - 1839 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65904.peg.1378 CDS gi|481785072|gb|ARAV01000008.1| 145341 145880 3 + 540 hypothetical protein - none -
fig|6666666.65904.peg.1379 CDS gi|481785072|gb|ARAV01000008.1| 146758 145895 -1 - 864 FIG00544278: hypothetical protein - none -
fig|6666666.65904.peg.1380 CDS gi|481785072|gb|ARAV01000008.1| 146900 148165 2 + 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65904.peg.1381 CDS gi|481785072|gb|ARAV01000008.1| 148211 149251 2 + 1041 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65904.peg.1382 CDS gi|481785072|gb|ARAV01000008.1| 149429 149869 2 + 441 hypothetical protein - none -
fig|6666666.65904.peg.1383 CDS gi|481785072|gb|ARAV01000008.1| 149929 150921 1 + 993 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.65904.peg.1384 CDS gi|481785072|gb|ARAV01000008.1| 150946 152229 1 + 1284 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65904.peg.1385 CDS gi|481785072|gb|ARAV01000008.1| 152222 152977 2 + 756 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65904.peg.1386 CDS gi|481785077|gb|ARAV01000007.1| 53 265 2 + 213 Mobile element protein - none -
fig|6666666.65904.peg.1387 CDS gi|481785077|gb|ARAV01000007.1| 3901 488 -1 - 3414 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65904.peg.1388 CDS gi|481785077|gb|ARAV01000007.1| 5278 4139 -1 - 1140 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65904.peg.1389 CDS gi|481785077|gb|ARAV01000007.1| 6232 5312 -1 - 921 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65904.peg.1390 CDS gi|481785077|gb|ARAV01000007.1| 7744 6233 -1 - 1512 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65904.peg.1391 CDS gi|481785077|gb|ARAV01000007.1| 7985 9313 2 + 1329 Transcriptional regulator, XRE family - none -
fig|6666666.65904.peg.1392 CDS gi|481785077|gb|ARAV01000007.1| 10716 9310 -3 - 1407 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65904.peg.1393 CDS gi|481785077|gb|ARAV01000007.1| 11984 10776 -2 - 1209 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65904.peg.1394 CDS gi|481785077|gb|ARAV01000007.1| 12396 12073 -3 - 324 Putative DNA-binding protein - none -
fig|6666666.65904.peg.1395 CDS gi|481785077|gb|ARAV01000007.1| 13300 12665 -1 - 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.65904.peg.1396 CDS gi|481785077|gb|ARAV01000007.1| 13370 13681 2 + 312 hypothetical protein - none -
fig|6666666.65904.peg.1397 CDS gi|481785077|gb|ARAV01000007.1| 13678 14634 1 + 957 FIG00544549: hypothetical protein - none -
fig|6666666.65904.peg.1398 CDS gi|481785077|gb|ARAV01000007.1| 14656 15894 1 + 1239 FIG026501: hypothetical protein - none -
fig|6666666.65904.peg.1399 CDS gi|481785077|gb|ARAV01000007.1| 16652 15936 -2 - 717 hypothetical protein - none -
fig|6666666.65904.peg.1400 CDS gi|481785077|gb|ARAV01000007.1| 16792 18102 1 + 1311 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1401 CDS gi|481785077|gb|ARAV01000007.1| 19147 18062 -1 - 1086 putative membrane protein - none -
fig|6666666.65904.peg.1402 CDS gi|481785077|gb|ARAV01000007.1| 19298 19594 2 + 297 hypothetical protein - none -
fig|6666666.65904.peg.1403 CDS gi|481785077|gb|ARAV01000007.1| 20684 19668 -2 - 1017 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65904.peg.1404 CDS gi|481785077|gb|ARAV01000007.1| 21021 20758 -3 - 264 hypothetical protein - none -
fig|6666666.65904.peg.1405 CDS gi|481785077|gb|ARAV01000007.1| 21103 21459 1 + 357 Transcriptional regulator, GntR family - none -
fig|6666666.65904.peg.1406 CDS gi|481785077|gb|ARAV01000007.1| 21456 22145 3 + 690 ABC transporter, ATP-binding protein - none -
fig|6666666.65904.peg.1407 CDS gi|481785077|gb|ARAV01000007.1| 22142 22855 2 + 714 hypothetical protein - none -
fig|6666666.65904.peg.1408 CDS gi|481785077|gb|ARAV01000007.1| 23658 22852 -3 - 807 Putative inner membrane protein - none -
fig|6666666.65904.peg.1409 CDS gi|481785077|gb|ARAV01000007.1| 24598 23708 -1 - 891 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65904.peg.1410 CDS gi|481785077|gb|ARAV01000007.1| 24875 27052 2 + 2178 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.65904.peg.1411 CDS gi|481785077|gb|ARAV01000007.1| 27141 27737 3 + 597 hypothetical protein - none -
fig|6666666.65904.peg.1412 CDS gi|481785077|gb|ARAV01000007.1| 29529 27751 -3 - 1779 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.65904.peg.1413 CDS gi|481785077|gb|ARAV01000007.1| 29979 31301 3 + 1323 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65904.peg.1414 CDS gi|481785077|gb|ARAV01000007.1| 31370 32512 2 + 1143 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65904.peg.1415 CDS gi|481785077|gb|ARAV01000007.1| 32832 32509 -3 - 324 hypothetical protein - none -
fig|6666666.65904.peg.1416 CDS gi|481785077|gb|ARAV01000007.1| 33695 32835 -2 - 861 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65904.peg.1417 CDS gi|481785077|gb|ARAV01000007.1| 33720 34190 3 + 471 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65904.peg.1418 CDS gi|481785077|gb|ARAV01000007.1| 34878 34216 -3 - 663 Uncharacterized protein conserved in bacteria - none -
fig|6666666.65904.peg.1419 CDS gi|481785077|gb|ARAV01000007.1| 36274 34883 -1 - 1392 transmembrane protein, distant homology with ydbT - none -
fig|6666666.65904.peg.1420 CDS gi|481785077|gb|ARAV01000007.1| 36774 36271 -3 - 504 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65904.peg.1421 CDS gi|481785077|gb|ARAV01000007.1| 39894 36805 -3 - 3090 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65904.peg.1422 CDS gi|481785077|gb|ARAV01000007.1| 40074 40958 3 + 885 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.1423 CDS gi|481785077|gb|ARAV01000007.1| 40958 41986 2 + 1029 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.1424 CDS gi|481785077|gb|ARAV01000007.1| 41983 42663 1 + 681 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.1425 CDS gi|481785077|gb|ARAV01000007.1| 42696 43472 3 + 777 Cof-like hydrolase - none -
fig|6666666.65904.peg.1426 CDS gi|481785077|gb|ARAV01000007.1| 44417 43476 -2 - 942 FIG00546271: hypothetical protein - none -
fig|6666666.65904.peg.1427 CDS gi|481785077|gb|ARAV01000007.1| 44683 44558 -1 - 126 hypothetical protein - none -
fig|6666666.65904.peg.1428 CDS gi|481785077|gb|ARAV01000007.1| 44819 44688 -2 - 132 hypothetical protein - none -
fig|6666666.65904.peg.1429 CDS gi|481785077|gb|ARAV01000007.1| 44901 45122 3 + 222 No significant database matches - none -
fig|6666666.65904.peg.1430 CDS gi|481785077|gb|ARAV01000007.1| 46674 45133 -3 - 1542 DNA polymerase-like protein PA0670 - none -
fig|6666666.65904.peg.1431 CDS gi|481785077|gb|ARAV01000007.1| 47409 46675 -3 - 735 hypothetical protein - none -
fig|6666666.65904.peg.1432 CDS gi|481785077|gb|ARAV01000007.1| 48071 47490 -2 - 582 cadmium resistance transporter, putative - none -
fig|6666666.65904.peg.1433 CDS gi|481785077|gb|ARAV01000007.1| 48179 48886 2 + 708 Pirin-like protein YhhW, possibly qercetin 2,3-dioxygenase activity - none -
fig|6666666.65904.peg.1434 CDS gi|481785077|gb|ARAV01000007.1| 49214 48897 -2 - 318 hypothetical membrane protein - none -
fig|6666666.65904.peg.1435 CDS gi|481785077|gb|ARAV01000007.1| 49279 49692 1 + 414 hypothetical membrane protein - none -
fig|6666666.65904.peg.1436 CDS gi|481785077|gb|ARAV01000007.1| 50358 49708 -3 - 651 two-component system response regulator - none -
fig|6666666.65904.peg.1437 CDS gi|481785077|gb|ARAV01000007.1| 51537 50365 -3 - 1173 FIG00545356: hypothetical protein - none -
fig|6666666.65904.peg.1438 CDS gi|481785077|gb|ARAV01000007.1| 51648 52778 3 + 1131 FIG00543896: hypothetical protein - none -
fig|6666666.65904.peg.1439 CDS gi|481785077|gb|ARAV01000007.1| 54415 52859 -1 - 1557 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65904.peg.1440 CDS gi|481785077|gb|ARAV01000007.1| 56214 54439 -3 - 1776 hypothetical protein - none -
fig|6666666.65904.peg.1441 CDS gi|481785077|gb|ARAV01000007.1| 57490 56357 -1 - 1134 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65904.peg.1442 CDS gi|481785077|gb|ARAV01000007.1| 59137 57614 -1 - 1524 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65904.peg.1443 CDS gi|481785077|gb|ARAV01000007.1| 59283 59651 3 + 369 FIG00544572: hypothetical protein - none -
fig|6666666.65904.peg.1444 CDS gi|481785077|gb|ARAV01000007.1| 60553 59648 -1 - 906 hypothetical protein - none -
fig|6666666.65904.peg.1445 CDS gi|481785077|gb|ARAV01000007.1| 61127 60546 -2 - 582 putative RNA polymerase sigma factor - none -
fig|6666666.65904.peg.1446 CDS gi|481785077|gb|ARAV01000007.1| 61792 62130 1 + 339 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.65904.peg.1447 CDS gi|481785077|gb|ARAV01000007.1| 63844 62225 -1 - 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65904.peg.1448 CDS gi|481785077|gb|ARAV01000007.1| 64162 63863 -1 - 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65904.peg.1449 CDS gi|481785077|gb|ARAV01000007.1| 65374 64316 -1 - 1059 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65904.peg.1450 CDS gi|481785077|gb|ARAV01000007.1| 65878 65378 -1 - 501 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65904.peg.1451 CDS gi|481785077|gb|ARAV01000007.1| 66531 65875 -3 - 657 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.65904.peg.1452 CDS gi|481785077|gb|ARAV01000007.1| 67034 66531 -2 - 504 hypothetical protein - none -
fig|6666666.65904.peg.1453 CDS gi|481785077|gb|ARAV01000007.1| 68650 67055 -1 - 1596 putative transport protein - none -
fig|6666666.65904.peg.1454 CDS gi|481785077|gb|ARAV01000007.1| 69409 68678 -1 - 732 SAM-dependent methyltransferases - none -
fig|6666666.65904.peg.1455 CDS gi|481785077|gb|ARAV01000007.1| 69893 69393 -2 - 501 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.65904.peg.1456 CDS gi|481785077|gb|ARAV01000007.1| 70994 69900 -2 - 1095 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65904.peg.1457 CDS gi|481785077|gb|ARAV01000007.1| 71676 71011 -3 - 666 hypothetical membrane protein - none -
fig|6666666.65904.peg.1458 CDS gi|481785077|gb|ARAV01000007.1| 72174 71695 -3 - 480 hypothetical protein - none -
fig|6666666.65904.peg.1459 CDS gi|481785077|gb|ARAV01000007.1| 74217 72355 -3 - 1863 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65904.peg.1460 CDS gi|481785077|gb|ARAV01000007.1| 74351 75193 2 + 843 FIG00545792: hypothetical protein - none -
fig|6666666.65904.peg.1461 CDS gi|481785077|gb|ARAV01000007.1| 75423 75190 -3 - 234 hypothetical protein - none -
fig|6666666.65904.peg.1462 CDS gi|481785077|gb|ARAV01000007.1| 77096 75423 -2 - 1674 hypothetical protein - none -
fig|6666666.65904.peg.1463 CDS gi|481785077|gb|ARAV01000007.1| 77235 77083 -3 - 153 hypothetical protein - none -
fig|6666666.65904.peg.1464 CDS gi|481785077|gb|ARAV01000007.1| 78907 77555 -1 - 1353 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65904.peg.1465 CDS gi|481785077|gb|ARAV01000007.1| 79552 78986 -1 - 567 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.65904.peg.1466 CDS gi|481785077|gb|ARAV01000007.1| 79995 79552 -3 - 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65904.peg.1467 CDS gi|481785077|gb|ARAV01000007.1| 80693 80400 -2 - 294 hypothetical protein - none -
fig|6666666.65904.peg.1468 CDS gi|481785077|gb|ARAV01000007.1| 81070 80729 -1 - 342 hypothetical protein - none -
fig|6666666.65904.peg.1469 CDS gi|481785077|gb|ARAV01000007.1| 82172 81204 -2 - 969 hypothetical protein - none -
fig|6666666.65904.peg.1470 CDS gi|481785077|gb|ARAV01000007.1| 85852 82169 -1 - 3684 FtsK/SpoIIIE family protein - none -
fig|6666666.65904.peg.1471 CDS gi|481785077|gb|ARAV01000007.1| 86085 87317 3 + 1233 Putative surface-anchored membrane protein - none -
fig|6666666.65904.peg.1472 CDS gi|481785077|gb|ARAV01000007.1| 87314 88468 2 + 1155 subtilase family protein - none -
fig|6666666.65904.peg.1473 CDS gi|481785077|gb|ARAV01000007.1| 88928 88476 -2 - 453 hypothetical protein - none -
fig|6666666.65904.peg.1474 CDS gi|481785077|gb|ARAV01000007.1| 89053 89475 1 + 423 hypothetical protein - none -
fig|6666666.65904.peg.1475 CDS gi|481785077|gb|ARAV01000007.1| 89726 89472 -2 - 255 putative hydrolase - none -
fig|6666666.65904.peg.1476 CDS gi|481785077|gb|ARAV01000007.1| 90781 90245 -1 - 537 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65904.peg.1477 CDS gi|481785077|gb|ARAV01000007.1| 92204 90897 -2 - 1308 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65904.peg.1478 CDS gi|481785077|gb|ARAV01000007.1| 93802 92279 -1 - 1524 FAD/FMN-containing dehydrogenases - none -
fig|6666666.65904.peg.1479 CDS gi|481785077|gb|ARAV01000007.1| 94961 93858 -2 - 1104 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.1480 CDS gi|481785077|gb|ARAV01000007.1| 97348 95165 -1 - 2184 hypothetical protein - none -
fig|6666666.65904.peg.1481 CDS gi|481785077|gb|ARAV01000007.1| 98369 97467 -2 - 903 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65904.peg.1482 CDS gi|481785077|gb|ARAV01000007.1| 99130 98594 -1 - 537 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65904.peg.1483 CDS gi|481785077|gb|ARAV01000007.1| 100235 99222 -2 - 1014 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65904.peg.1484 CDS gi|481785077|gb|ARAV01000007.1| 100971 100366 -3 - 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.65904.peg.1485 CDS gi|481785077|gb|ARAV01000007.1| 101388 100996 -3 - 393 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.65904.peg.1486 CDS gi|481785077|gb|ARAV01000007.1| 101760 101392 -3 - 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.65904.peg.1487 CDS gi|481785077|gb|ARAV01000007.1| 102156 101938 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65904.peg.1488 CDS gi|481785077|gb|ARAV01000007.1| 103095 102367 -3 - 729 Putative secreted protein - none -
fig|6666666.65904.peg.1489 CDS gi|481785077|gb|ARAV01000007.1| 103935 103132 -3 - 804 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65904.peg.1490 CDS gi|481785077|gb|ARAV01000007.1| 104601 104056 -3 - 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65904.peg.1491 CDS gi|481785077|gb|ARAV01000007.1| 105920 104601 -2 - 1320 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65904.peg.1492 CDS gi|481785077|gb|ARAV01000007.1| 106180 106692 1 + 513 hypothetical protein - none -
fig|6666666.65904.peg.1493 CDS gi|481785077|gb|ARAV01000007.1| 107208 106762 -3 - 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65904.peg.1494 CDS gi|481785077|gb|ARAV01000007.1| 107401 107216 -1 - 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65904.peg.1495 CDS gi|481785077|gb|ARAV01000007.1| 108048 107407 -3 - 642 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.65904.peg.1496 CDS gi|481785077|gb|ARAV01000007.1| 108493 108089 -1 - 405 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65904.peg.1497 CDS gi|481785077|gb|ARAV01000007.1| 109033 108497 -1 - 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65904.peg.1498 CDS gi|481785077|gb|ARAV01000007.1| 109449 109051 -3 - 399 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.65904.peg.1499 CDS gi|481785077|gb|ARAV01000007.1| 109812 112103 3 + 2292 Putative formate dehydrogenase oxidoreductase protein Formate hydrogenase
fig|6666666.65904.peg.1500 CDS gi|481785077|gb|ARAV01000007.1| 112109 112405 2 + 297 hypothetical protein - none -
fig|6666666.65904.peg.1501 CDS gi|481785077|gb|ARAV01000007.1| 112392 113264 3 + 873 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.65904.peg.1502 CDS gi|481785077|gb|ARAV01000007.1| 113945 113235 -2 - 711 Phage protein - none -
fig|6666666.65904.peg.1503 CDS gi|481785077|gb|ARAV01000007.1| 114083 114889 2 + 807 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65904.peg.1504 CDS gi|481785077|gb|ARAV01000007.1| 115692 114901 -3 - 792 formate/nitrite transporter family protein - none -
fig|6666666.65904.peg.1505 CDS gi|481785077|gb|ARAV01000007.1| 115929 115768 -3 - 162 hypothetical protein - none -
fig|6666666.65904.peg.1506 CDS gi|481785077|gb|ARAV01000007.1| 115948 117186 1 + 1239 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.1507 CDS gi|481785077|gb|ARAV01000007.1| 117190 118848 1 + 1659 major facilitator superfamily MFS_1 - none -
fig|6666666.65904.peg.1508 CDS gi|481785077|gb|ARAV01000007.1| 119528 118950 -2 - 579 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65904.peg.1509 CDS gi|481785077|gb|ARAV01000007.1| 119844 119530 -3 - 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65904.peg.1510 CDS gi|481785077|gb|ARAV01000007.1| 120217 119849 -1 - 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65904.peg.1511 CDS gi|481785077|gb|ARAV01000007.1| 120271 120384 1 + 114 hypothetical protein - none -
fig|6666666.65904.peg.1512 CDS gi|481785077|gb|ARAV01000007.1| 121369 120440 -1 - 930 hypothetical protein - none -
fig|6666666.65904.peg.1513 CDS gi|481785077|gb|ARAV01000007.1| 121897 121616 -1 - 282 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.65904.peg.1514 CDS gi|481785077|gb|ARAV01000007.1| 122130 121900 -3 - 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65904.peg.1515 CDS gi|481785077|gb|ARAV01000007.1| 122546 122130 -2 - 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65904.peg.1516 CDS gi|481785077|gb|ARAV01000007.1| 123299 122553 -2 - 747 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.65904.peg.1517 CDS gi|481785077|gb|ARAV01000007.1| 123661 123299 -1 - 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65904.peg.1518 CDS gi|481785077|gb|ARAV01000007.1| 123940 123665 -1 - 276 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.65904.peg.1519 CDS gi|481785077|gb|ARAV01000007.1| 124790 123957 -2 - 834 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65904.peg.1520 CDS gi|481785077|gb|ARAV01000007.1| 125134 124829 -1 - 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65904.peg.1521 CDS gi|481785077|gb|ARAV01000007.1| 125796 125134 -3 - 663 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65904.peg.1522 CDS gi|481785077|gb|ARAV01000007.1| 126449 125793 -2 - 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65904.peg.1523 CDS gi|481785077|gb|ARAV01000007.1| 126794 126489 -2 - 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.65904.peg.1524 CDS gi|481785077|gb|ARAV01000007.1| 127514 127984 2 + 471 Alkaline shock protein 23 - none -
fig|6666666.65904.peg.1525 CDS gi|481785077|gb|ARAV01000007.1| 127986 128318 3 + 333 hypothetical protein - none -
fig|6666666.65904.peg.1526 CDS gi|481785077|gb|ARAV01000007.1| 128315 128518 2 + 204 hypothetical protein - none -
fig|6666666.65904.peg.1527 CDS gi|481785077|gb|ARAV01000007.1| 128518 129300 1 + 783 hypothetical protein - none -
fig|6666666.65904.peg.1528 CDS gi|481785077|gb|ARAV01000007.1| 129297 129854 3 + 558 hypothetical protein - none -
fig|6666666.65904.peg.1529 CDS gi|481785077|gb|ARAV01000007.1| 129854 130408 2 + 555 hypothetical protein - none -
fig|6666666.65904.peg.1530 CDS gi|481785077|gb|ARAV01000007.1| 131103 130405 -3 - 699 hypothetical protein - none -
fig|6666666.65904.peg.1531 CDS gi|481785077|gb|ARAV01000007.1| 132394 131204 -1 - 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65904.peg.1532 CDS gi|481785077|gb|ARAV01000007.1| 134971 132803 -1 - 2169 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65904.peg.1533 CDS gi|481785077|gb|ARAV01000007.1| 135660 135193 -3 - 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65904.peg.1534 CDS gi|481785077|gb|ARAV01000007.1| 136035 135664 -3 - 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65904.peg.1535 CDS gi|481785077|gb|ARAV01000007.1| 136352 137029 2 + 678 hypothetical protein - none -
fig|6666666.65904.peg.1536 CDS gi|481785077|gb|ARAV01000007.1| 141129 137131 -3 - 3999 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65904.peg.1537 CDS gi|481785077|gb|ARAV01000007.1| 144724 141248 -1 - 3477 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65904.peg.1538 CDS gi|481785077|gb|ARAV01000007.1| 146110 145163 -1 - 948 FIG00545886: hypothetical protein - none -
fig|6666666.65904.peg.1539 CDS gi|481785077|gb|ARAV01000007.1| 146687 146301 -2 - 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65904.peg.1540 CDS gi|481785077|gb|ARAV01000007.1| 147289 146765 -1 - 525 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65904.peg.1541 CDS gi|481785077|gb|ARAV01000007.1| 149009 147543 -2 - 1467 Phytoene dehydrogenase and related proteins - none -
fig|6666666.65904.peg.1542 CDS gi|481785077|gb|ARAV01000007.1| 150048 149017 -3 - 1032 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65904.peg.1543 CDS gi|481785077|gb|ARAV01000007.1| 150859 150143 -1 - 717 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65904.peg.1544 CDS gi|481785077|gb|ARAV01000007.1| 151357 150929 -1 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65904.peg.1545 CDS gi|481785077|gb|ARAV01000007.1| 151516 151385 -1 - 132 hypothetical protein - none -
fig|6666666.65904.peg.1546 CDS gi|481785077|gb|ARAV01000007.1| 152501 151566 -2 - 936 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65904.peg.1547 CDS gi|481785077|gb|ARAV01000007.1| 152963 152640 -2 - 324 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65904.peg.1548 CDS gi|481785077|gb|ARAV01000007.1| 154739 153723 -2 - 1017 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.65904.peg.1549 CDS gi|481785077|gb|ARAV01000007.1| 154891 156120 1 + 1230 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65904.peg.1550 CDS gi|481785077|gb|ARAV01000007.1| 156826 156137 -1 - 690 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65904.peg.1551 CDS gi|481785077|gb|ARAV01000007.1| 158069 156858 -2 - 1212 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65904.peg.1552 CDS gi|481785077|gb|ARAV01000007.1| 158558 158124 -2 - 435 FIG00543979: hypothetical protein - none -
fig|6666666.65904.peg.1553 CDS gi|481785077|gb|ARAV01000007.1| 160189 158558 -1 - 1632 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65904.peg.1554 CDS gi|481785077|gb|ARAV01000007.1| 160802 160197 -2 - 606 hypothetical protein - none -
fig|6666666.65904.peg.1555 CDS gi|481785077|gb|ARAV01000007.1| 161793 160831 -3 - 963 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65904.peg.1556 CDS gi|481785077|gb|ARAV01000007.1| 162393 161803 -3 - 591 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.65904.peg.1557 CDS gi|481785077|gb|ARAV01000007.1| 162461 163414 2 + 954 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65904.peg.1558 CDS gi|481785077|gb|ARAV01000007.1| 163811 163668 -2 - 144 hypothetical protein - none -
fig|6666666.65904.peg.1559 CDS gi|481785077|gb|ARAV01000007.1| 164406 163984 -3 - 423 hypothetical protein - none -
fig|6666666.65904.peg.1560 CDS gi|481785081|gb|ARAV01000006.1| 784 2811 1 + 2028 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65904.peg.1561 CDS gi|481785081|gb|ARAV01000006.1| 3003 3485 3 + 483 hypothetical protein - none -
fig|6666666.65904.peg.1562 CDS gi|481785081|gb|ARAV01000006.1| 3927 3457 -3 - 471 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65904.peg.1563 CDS gi|481785081|gb|ARAV01000006.1| 4318 4061 -1 - 258 Alkylphosphonate utilization operon protein PhnA Alkylphosphonate utilization
fig|6666666.65904.peg.1564 CDS gi|481785081|gb|ARAV01000006.1| 4689 4330 -3 - 360 hypothetical protein - none -
fig|6666666.65904.peg.1565 CDS gi|481785081|gb|ARAV01000006.1| 5912 4827 -2 - 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65904.peg.1566 CDS gi|481785081|gb|ARAV01000006.1| 5971 7449 1 + 1479 FIG00546199: hypothetical protein - none -
fig|6666666.65904.peg.1567 CDS gi|481785081|gb|ARAV01000006.1| 7479 8582 3 + 1104 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.65904.peg.1568 CDS gi|481785081|gb|ARAV01000006.1| 8831 9397 2 + 567 hypothetical membrane protein - none -
fig|6666666.65904.peg.1569 CDS gi|481785081|gb|ARAV01000006.1| 10373 9408 -2 - 966 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65904.peg.1570 CDS gi|481785081|gb|ARAV01000006.1| 10523 11716 2 + 1194 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65904.peg.1571 CDS gi|481785081|gb|ARAV01000006.1| 11775 12041 3 + 267 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65904.peg.1572 CDS gi|481785081|gb|ARAV01000006.1| 12628 12044 -1 - 585 FIG00545451: hypothetical protein - none -
fig|6666666.65904.peg.1573 CDS gi|481785081|gb|ARAV01000006.1| 12909 13919 3 + 1011 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.1574 CDS gi|481785081|gb|ARAV01000006.1| 14026 15426 1 + 1401 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65904.peg.1575 CDS gi|481785081|gb|ARAV01000006.1| 15491 16015 2 + 525 hypothetical protein - none -
fig|6666666.65904.peg.1576 CDS gi|481785081|gb|ARAV01000006.1| 16981 15986 -1 - 996 hypothetical protein - none -
fig|6666666.65904.peg.1577 CDS gi|481785081|gb|ARAV01000006.1| 17051 17692 2 + 642 hypothetical protein - none -
fig|6666666.65904.peg.1578 CDS gi|481785081|gb|ARAV01000006.1| 17686 19242 1 + 1557 permease of the major facilitator superfamily - none -
fig|6666666.65904.peg.1579 CDS gi|481785081|gb|ARAV01000006.1| 19885 19328 -1 - 558 sortase or related acyltransferase - none -
fig|6666666.65904.peg.1580 CDS gi|481785081|gb|ARAV01000006.1| 21308 19956 -2 - 1353 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.65904.peg.1581 CDS gi|481785081|gb|ARAV01000006.1| 22103 21462 -2 - 642 hypothetical protein - none -
fig|6666666.65904.peg.1582 CDS gi|481785081|gb|ARAV01000006.1| 22796 22158 -2 - 639 putative LysR-family transcriptional regulator - none -
fig|6666666.65904.peg.1583 CDS gi|481785081|gb|ARAV01000006.1| 22815 23210 3 + 396 FIG00546727: hypothetical protein - none -
fig|6666666.65904.peg.1584 CDS gi|481785081|gb|ARAV01000006.1| 24567 23278 -3 - 1290 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.65904.peg.1585 CDS gi|481785081|gb|ARAV01000006.1| 24753 25607 3 + 855 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65904.peg.1586 CDS gi|481785081|gb|ARAV01000006.1| 26390 25620 -2 - 771 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65904.peg.1587 CDS gi|481785081|gb|ARAV01000006.1| 27506 26412 -2 - 1095 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.1588 CDS gi|481785081|gb|ARAV01000006.1| 28071 27769 -3 - 303 FIG00543949: hypothetical protein - none -
fig|6666666.65904.peg.1589 CDS gi|481785081|gb|ARAV01000006.1| 28946 28077 -2 - 870 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65904.peg.1590 CDS gi|481785081|gb|ARAV01000006.1| 29100 29570 3 + 471 FIG00544319: hypothetical protein - none -
fig|6666666.65904.peg.1591 CDS gi|481785081|gb|ARAV01000006.1| 29732 30253 2 + 522 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65904.peg.1592 CDS gi|481785081|gb|ARAV01000006.1| 30322 30648 1 + 327 hypothetical protein - none -
fig|6666666.65904.peg.1593 CDS gi|481785081|gb|ARAV01000006.1| 31406 30645 -2 - 762 hypothetical protein - none -
fig|6666666.65904.peg.1594 CDS gi|481785081|gb|ARAV01000006.1| 32429 31596 -2 - 834 FIG00543890: hypothetical protein - none -
fig|6666666.65904.peg.1595 CDS gi|481785081|gb|ARAV01000006.1| 32595 33557 3 + 963 Suppressor of fused - none -
fig|6666666.65904.peg.1596 CDS gi|481785081|gb|ARAV01000006.1| 33727 35181 1 + 1455 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65904.peg.1597 CDS gi|481785081|gb|ARAV01000006.1| 38820 35197 -3 - 3624 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.65904.peg.1598 CDS gi|481785081|gb|ARAV01000006.1| 39490 38873 -1 - 618 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.1599 CDS gi|481785081|gb|ARAV01000006.1| 41311 39743 -1 - 1569 Multicopper oxidase Copper homeostasis
fig|6666666.65904.peg.1600 CDS gi|481785081|gb|ARAV01000006.1| 41582 42895 2 + 1314 Putative membrane protein - none -
fig|6666666.65904.peg.1601 CDS gi|481785081|gb|ARAV01000006.1| 43055 44512 2 + 1458 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65904.peg.1602 CDS gi|481785081|gb|ARAV01000006.1| 44524 45501 1 + 978 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.65904.peg.1603 CDS gi|481785081|gb|ARAV01000006.1| 45737 46246 2 + 510 Fumarate reductase, flavoprotein subunit precursor (EC 1.3.99.1) - none -
fig|6666666.65904.peg.1604 CDS gi|481785081|gb|ARAV01000006.1| 46246 48675 1 + 2430 Fumarate reductase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase
fig|6666666.65904.peg.1605 CDS gi|481785081|gb|ARAV01000006.1| 48725 49633 2 + 909 Hypothetical similar to thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.65904.peg.1606 CDS gi|481785081|gb|ARAV01000006.1| 49729 51081 1 + 1353 hypothetical protein - none -
fig|6666666.65904.peg.1607 CDS gi|481785081|gb|ARAV01000006.1| 52210 51074 -1 - 1137 putative multidrug resistance protein - none -
fig|6666666.65904.peg.1608 CDS gi|481785081|gb|ARAV01000006.1| 52287 52829 3 + 543 DNA alkylation repair enzyme - none -
fig|6666666.65904.peg.1609 CDS gi|481785081|gb|ARAV01000006.1| 52913 54262 2 + 1350 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65904.peg.1610 CDS gi|481785081|gb|ARAV01000006.1| 54486 55112 3 + 627 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65904.peg.1611 CDS gi|481785081|gb|ARAV01000006.1| 55191 55748 3 + 558 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65904.peg.1612 CDS gi|481785081|gb|ARAV01000006.1| 55969 56712 1 + 744 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.1613 CDS gi|481785081|gb|ARAV01000006.1| 58200 56827 -3 - 1374 Putative n-hydroxybenzoate hydroxylase Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65904.peg.1614 CDS gi|481785081|gb|ARAV01000006.1| 59616 58249 -3 - 1368 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65904.peg.1615 CDS gi|481785081|gb|ARAV01000006.1| 59681 60466 2 + 786 hypothetical protein - none -
fig|6666666.65904.peg.1616 CDS gi|481785081|gb|ARAV01000006.1| 60590 61711 2 + 1122 Gentisate 1,2-dioxygenase (EC 1.13.11.4) Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65904.peg.1617 CDS gi|481785081|gb|ARAV01000006.1| 61716 62543 3 + 828 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65904.peg.1618 CDS gi|481785081|gb|ARAV01000006.1| 62543 63256 2 + 714 Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4) Glutathione analogs: mycothiol
fig|6666666.65904.peg.1619 CDS gi|481785081|gb|ARAV01000006.1| 64755 63343 -3 - 1413 hypothetical protein - none -
fig|6666666.65904.peg.1620 CDS gi|481785081|gb|ARAV01000006.1| 65708 64752 -2 - 957 oxidoreductase - none -
fig|6666666.65904.peg.1621 CDS gi|481785081|gb|ARAV01000006.1| 65722 66375 1 + 654 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65904.peg.1622 CDS gi|481785081|gb|ARAV01000006.1| 66993 66433 -3 - 561 putative reductase - none -
fig|6666666.65904.peg.1623 CDS gi|481785081|gb|ARAV01000006.1| 67172 68803 2 + 1632 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65904.peg.1624 CDS gi|481785081|gb|ARAV01000006.1| 69672 68800 -3 - 873 hypothetical protein - none -
fig|6666666.65904.peg.1625 CDS gi|481785081|gb|ARAV01000006.1| 69799 70563 1 + 765 putative secreted protein - none -
fig|6666666.65904.peg.1626 CDS gi|481785081|gb|ARAV01000006.1| 70929 70564 -3 - 366 hypothetical protein - none -
fig|6666666.65904.peg.1627 CDS gi|481785081|gb|ARAV01000006.1| 71896 70934 -1 - 963 Inner membrane protein YihY, formerly thought to be RNase BN CBSS-342610.3.peg.283;
LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.65904.peg.1628 CDS gi|481785081|gb|ARAV01000006.1| 72246 72728 3 + 483 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65904.peg.1629 CDS gi|481785081|gb|ARAV01000006.1| 72758 73168 2 + 411 hypothetical protein - none -
fig|6666666.65904.peg.1630 CDS gi|481785081|gb|ARAV01000006.1| 73317 74606 3 + 1290 Sulfolipid (UDP-sulfoquinovose) biosynthesis protein - none -
fig|6666666.65904.peg.1631 CDS gi|481785081|gb|ARAV01000006.1| 74613 75773 3 + 1161 Glycosyltransferase - none -
fig|6666666.65904.peg.1632 CDS gi|481785081|gb|ARAV01000006.1| 76193 76648 2 + 456 hypothetical protein - none -
fig|6666666.65904.peg.1633 CDS gi|481785081|gb|ARAV01000006.1| 78971 76770 -2 - 2202 hypothetical protein - none -
fig|6666666.65904.peg.1634 CDS gi|481785081|gb|ARAV01000006.1| 81069 79618 -3 - 1452 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65904.peg.1635 CDS gi|481785081|gb|ARAV01000006.1| 81401 82585 2 + 1185 hypothetical protein - none -
fig|6666666.65904.peg.1636 CDS gi|481785081|gb|ARAV01000006.1| 83568 82582 -3 - 987 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65904.peg.1637 CDS gi|481785081|gb|ARAV01000006.1| 83585 84403 2 + 819 FIG00544241: hypothetical protein - none -
fig|6666666.65904.peg.1638 CDS gi|481785081|gb|ARAV01000006.1| 84400 84963 1 + 564 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.65904.peg.1639 CDS gi|481785081|gb|ARAV01000006.1| 85883 84987 -2 - 897 FIG00545275: hypothetical protein - none -
fig|6666666.65904.peg.1640 CDS gi|481785081|gb|ARAV01000006.1| 86289 85963 -3 - 327 FIG00544339: hypothetical protein - none -
fig|6666666.65904.peg.1641 CDS gi|481785081|gb|ARAV01000006.1| 87992 86346 -2 - 1647 hypothetical protein - none -
fig|6666666.65904.peg.1642 CDS gi|481785081|gb|ARAV01000006.1| 89826 88015 -3 - 1812 ABC transporter, ATP-binding protein - none -
fig|6666666.65904.peg.1643 CDS gi|481785081|gb|ARAV01000006.1| 90857 89877 -2 - 981 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65904.peg.1644 CDS gi|481785081|gb|ARAV01000006.1| 91722 90850 -3 - 873 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.65904.peg.1645 CDS gi|481785081|gb|ARAV01000006.1| 92944 91745 -1 - 1200 Cell wall-binding protein - none -
fig|6666666.65904.peg.1646 CDS gi|481785081|gb|ARAV01000006.1| 93999 93160 -3 - 840 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65904.peg.1647 CDS gi|481785081|gb|ARAV01000006.1| 94062 94451 3 + 390 hypothetical protein - none -
fig|6666666.65904.peg.1648 CDS gi|481785081|gb|ARAV01000006.1| 94530 95009 3 + 480 GCN5-related N-acetyltransferase - none -
fig|6666666.65904.peg.1649 CDS gi|481785081|gb|ARAV01000006.1| 96182 95019 -2 - 1164 hypothetical protein - none -
fig|6666666.65904.peg.1650 CDS gi|481785081|gb|ARAV01000006.1| 98323 96233 -1 - 2091 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.65904.peg.1651 CDS gi|481785081|gb|ARAV01000006.1| 99527 98364 -2 - 1164 putative integral membrane transporter - none -
fig|6666666.65904.peg.1652 CDS gi|481785081|gb|ARAV01000006.1| 101390 99537 -2 - 1854 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65904.peg.1653 CDS gi|481785081|gb|ARAV01000006.1| 103319 101457 -2 - 1863 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65904.peg.1654 CDS gi|481785081|gb|ARAV01000006.1| 105346 103514 -1 - 1833 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65904.peg.1655 CDS gi|481785081|gb|ARAV01000006.1| 106306 105449 -1 - 858 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65904.peg.1656 CDS gi|481785081|gb|ARAV01000006.1| 106541 108025 2 + 1485 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.1657 CDS gi|481785081|gb|ARAV01000006.1| 108745 108050 -1 - 696 hypothetical membrane protein - none -
fig|6666666.65904.peg.1658 CDS gi|481785081|gb|ARAV01000006.1| 109133 108738 -2 - 396 hypothetical protein - none -
fig|6666666.65904.peg.1659 CDS gi|481785081|gb|ARAV01000006.1| 109237 109821 1 + 585 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65904.peg.1660 CDS gi|481785081|gb|ARAV01000006.1| 111149 109818 -2 - 1332 FIG00544639: hypothetical protein - none -
fig|6666666.65904.peg.1661 CDS gi|481785081|gb|ARAV01000006.1| 111753 111262 -3 - 492 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.65904.peg.1662 CDS gi|481785081|gb|ARAV01000006.1| 113233 111962 -1 - 1272 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65904.peg.1663 CDS gi|481785081|gb|ARAV01000006.1| 114295 113351 -1 - 945 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65904.peg.1664 CDS gi|481785081|gb|ARAV01000006.1| 114358 114957 1 + 600 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65904.peg.1665 CDS gi|481785081|gb|ARAV01000006.1| 115042 115683 1 + 642 Heat shock protein 22.5 (Hsp22.5) - none -
fig|6666666.65904.peg.1666 CDS gi|481785081|gb|ARAV01000006.1| 115799 116218 2 + 420 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65904.peg.1667 CDS gi|481785081|gb|ARAV01000006.1| 116536 116306 -1 - 231 hypothetical protein - none -
fig|6666666.65904.peg.1668 CDS gi|481785081|gb|ARAV01000006.1| 117140 116577 -2 - 564 molybdopterin biosynthesis enzyme - none -
fig|6666666.65904.peg.1669 CDS gi|481785081|gb|ARAV01000006.1| 118481 117210 -2 - 1272 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.65904.peg.1670 CDS gi|481785081|gb|ARAV01000006.1| 118868 118695 -2 - 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65904.peg.1671 CDS gi|481785081|gb|ARAV01000006.1| 119181 118912 -3 - 270 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.65904.peg.1672 CDS gi|481785081|gb|ARAV01000006.1| 120459 119356 -3 - 1104 CAAX amino terminal protease family protein - none -
fig|6666666.65904.peg.1673 CDS gi|481785081|gb|ARAV01000006.1| 120432 121148 3 + 717 Putative two-component system sensor kinase - none -
fig|6666666.65904.peg.1674 CDS gi|481785081|gb|ARAV01000006.1| 121182 121490 3 + 309 hypothetical protein - none -
fig|6666666.65904.peg.1675 CDS gi|481785081|gb|ARAV01000006.1| 121487 122116 2 + 630 DNA-binding response regulator, LuxR family - none -
fig|6666666.65904.peg.1676 CDS gi|481785081|gb|ARAV01000006.1| 122357 122593 2 + 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65904.peg.1677 CDS gi|481785081|gb|ARAV01000006.1| 122597 122761 2 + 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65904.peg.1678 CDS gi|481785081|gb|ARAV01000006.1| 122765 123070 2 + 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.65904.peg.1679 CDS gi|481785081|gb|ARAV01000006.1| 123086 123334 2 + 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.65904.peg.1680 CDS gi|481785081|gb|ARAV01000006.1| 123515 124198 2 + 684 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.1681 CDS gi|481785081|gb|ARAV01000006.1| 125652 125101 -3 - 552 Putative membrane protein - none -
fig|6666666.65904.peg.1682 CDS gi|481785081|gb|ARAV01000006.1| 125835 125704 -3 - 132 hypothetical protein - none -
fig|6666666.65904.peg.1683 CDS gi|481785081|gb|ARAV01000006.1| 127446 125893 -3 - 1554 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65904.peg.1684 CDS gi|481785081|gb|ARAV01000006.1| 128050 127451 -1 - 600 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65904.peg.1685 CDS gi|481785081|gb|ARAV01000006.1| 129450 128155 -3 - 1296 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65904.peg.1686 CDS gi|481785081|gb|ARAV01000006.1| 130511 129918 -2 - 594 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.1687 CDS gi|481785081|gb|ARAV01000006.1| 131623 130577 -1 - 1047 FIG021574: Possible membrane protein related to de Novo purine biosynthesis A hypothetical coupled to de Novo Purine Biosynthesis
fig|6666666.65904.peg.1688 CDS gi|481785081|gb|ARAV01000006.1| 132315 133043 3 + 729 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65904.peg.1689 CDS gi|481785081|gb|ARAV01000006.1| 133424 134107 2 + 684 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65904.peg.1690 CDS gi|481785081|gb|ARAV01000006.1| 136426 134108 -1 - 2319 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65904.peg.1691 CDS gi|481785081|gb|ARAV01000006.1| 136488 136787 3 + 300 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65904.peg.1692 CDS gi|481785081|gb|ARAV01000006.1| 137155 136820 -1 - 336 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.65904.peg.1693 CDS gi|481785081|gb|ARAV01000006.1| 137248 138882 1 + 1635 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.1694 CDS gi|481785081|gb|ARAV01000006.1| 138999 140489 3 + 1491 hypothetical protein - none -
fig|6666666.65904.peg.1695 CDS gi|481785081|gb|ARAV01000006.1| 140892 140479 -3 - 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.1696 CDS gi|481785081|gb|ARAV01000006.1| 141053 141718 2 + 666 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65904.peg.1697 CDS gi|481785081|gb|ARAV01000006.1| 142520 141723 -2 - 798 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65904.peg.1698 CDS gi|481785081|gb|ARAV01000006.1| 147174 142546 -3 - 4629 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65904.peg.1699 CDS gi|481785081|gb|ARAV01000006.1| 147225 147989 3 + 765 inositol monophosphatase family protein - none -
fig|6666666.65904.peg.1700 CDS gi|481785081|gb|ARAV01000006.1| 148063 148863 1 + 801 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.65904.peg.1701 CDS gi|481785081|gb|ARAV01000006.1| 148860 149384 3 + 525 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65904.peg.1702 CDS gi|481785081|gb|ARAV01000006.1| 149377 149670 1 + 294 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65904.peg.1703 CDS gi|481785081|gb|ARAV01000006.1| 149969 149691 -2 - 279 hypothetical protein - none -
fig|6666666.65904.peg.1704 CDS gi|481785081|gb|ARAV01000006.1| 150464 151369 2 + 906 Putative secreted protein - none -
fig|6666666.65904.peg.1705 CDS gi|481785081|gb|ARAV01000006.1| 153116 151467 -2 - 1650 putative transport protein - none -
fig|6666666.65904.peg.1706 CDS gi|481785081|gb|ARAV01000006.1| 153464 153120 -2 - 345 FIG00544151: hypothetical protein - none -
fig|6666666.65904.peg.1707 CDS gi|481785081|gb|ARAV01000006.1| 154567 153734 -1 - 834 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65904.peg.1708 CDS gi|481785081|gb|ARAV01000006.1| 155082 154723 -3 - 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65904.peg.1709 CDS gi|481785081|gb|ARAV01000006.1| 156512 155217 -2 - 1296 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65904.peg.1710 CDS gi|481785081|gb|ARAV01000006.1| 156951 158078 3 + 1128 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.1711 CDS gi|481785081|gb|ARAV01000006.1| 158185 159255 1 + 1071 FIG00545091: hypothetical protein - none -
fig|6666666.65904.peg.1712 CDS gi|481785081|gb|ARAV01000006.1| 159312 160169 3 + 858 FIG00544583: hypothetical protein - none -
fig|6666666.65904.peg.1713 CDS gi|481785081|gb|ARAV01000006.1| 160985 160176 -2 - 810 putative rRNA methylase - none -
fig|6666666.65904.peg.1714 CDS gi|481785081|gb|ARAV01000006.1| 162485 161016 -2 - 1470 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65904.peg.1715 CDS gi|481785081|gb|ARAV01000006.1| 162750 163436 3 + 687 hypothetical protein - none -
fig|6666666.65904.peg.1716 CDS gi|481785081|gb|ARAV01000006.1| 164173 163445 -1 - 729 FIG00546806: hypothetical protein - none -
fig|6666666.65904.peg.1717 CDS gi|481785081|gb|ARAV01000006.1| 164211 165095 3 + 885 glutamine cyclotransferase - none -
fig|6666666.65904.peg.1718 CDS gi|481785081|gb|ARAV01000006.1| 165107 165625 2 + 519 FIG00545981: hypothetical protein - none -
fig|6666666.65904.peg.1719 CDS gi|481785081|gb|ARAV01000006.1| 166050 165661 -3 - 390 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65904.peg.1720 CDS gi|481785081|gb|ARAV01000006.1| 166678 167340 1 + 663 FIG00996461: hypothetical protein - none -
fig|6666666.65904.peg.1721 CDS gi|481785081|gb|ARAV01000006.1| 167684 167490 -2 - 195 FIG00543815: hypothetical protein - none -
fig|6666666.65904.peg.1722 CDS gi|481785081|gb|ARAV01000006.1| 167762 169981 2 + 2220 probable DNA-binding protein - none -
fig|6666666.65904.peg.1723 CDS gi|481785081|gb|ARAV01000006.1| 170118 170681 3 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.1724 CDS gi|481785081|gb|ARAV01000006.1| 170735 171610 2 + 876 ABC transporter, ATP-binding protein - none -
fig|6666666.65904.peg.1725 CDS gi|481785081|gb|ARAV01000006.1| 171607 172785 1 + 1179 putative ABC transporter - none -
fig|6666666.65904.peg.1726 CDS gi|481785081|gb|ARAV01000006.1| 172841 174481 2 + 1641 DNA repair helicase - none -
fig|6666666.65904.peg.1727 CDS gi|481785081|gb|ARAV01000006.1| 174493 175146 1 + 654 FIG00546748: hypothetical protein - none -
fig|6666666.65904.peg.1728 CDS gi|481785081|gb|ARAV01000006.1| 175170 176327 3 + 1158 Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase - none -
fig|6666666.65904.peg.1729 CDS gi|481785081|gb|ARAV01000006.1| 176675 176553 -2 - 123 hypothetical protein - none -
fig|6666666.65904.peg.1730 CDS gi|481785081|gb|ARAV01000006.1| 177295 176735 -1 - 561 putative ABC transporter integral membrane protein - none -
fig|6666666.65904.peg.1731 CDS gi|481785081|gb|ARAV01000006.1| 177570 177364 -3 - 207 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.1732 CDS gi|481785081|gb|ARAV01000006.1| 178044 177604 -3 - 441 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.1733 CDS gi|481785085|gb|ARAV01000005.1| 335 1630 2 + 1296 FIG00545970: hypothetical protein - none -
fig|6666666.65904.peg.1734 CDS gi|481785085|gb|ARAV01000005.1| 1943 3448 2 + 1506 putative transport protein - none -
fig|6666666.65904.peg.1735 CDS gi|481785085|gb|ARAV01000005.1| 3692 5173 2 + 1482 putative transport protein - none -
fig|6666666.65904.peg.1736 CDS gi|481785085|gb|ARAV01000005.1| 5345 7900 2 + 2556 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65904.peg.1737 CDS gi|481785085|gb|ARAV01000005.1| 8491 8631 1 + 141 hypothetical protein - none -
fig|6666666.65904.peg.1738 CDS gi|481785085|gb|ARAV01000005.1| 8651 9490 2 + 840 Rhodanese-related sulfurtransferase - none -
fig|6666666.65904.peg.1739 CDS gi|481785085|gb|ARAV01000005.1| 9514 10704 1 + 1191 FIG00544840: hypothetical protein - none -
fig|6666666.65904.peg.1740 CDS gi|481785085|gb|ARAV01000005.1| 10715 11269 2 + 555 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.65904.peg.1741 CDS gi|481785085|gb|ARAV01000005.1| 11262 11915 3 + 654 probable RNA methyltransferase - none -
fig|6666666.65904.peg.1742 CDS gi|481785085|gb|ARAV01000005.1| 11967 13154 3 + 1188 fructose-bisphosphate aldolase family protein - none -
fig|6666666.65904.peg.1743 CDS gi|481785085|gb|ARAV01000005.1| 13273 14307 1 + 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.1744 CDS gi|481785085|gb|ARAV01000005.1| 14421 15593 3 + 1173 hypothetical protein - none -
fig|6666666.65904.peg.1745 CDS gi|481785085|gb|ARAV01000005.1| 15961 15602 -1 - 360 hypothetical protein - none -
fig|6666666.65904.peg.1746 CDS gi|481785085|gb|ARAV01000005.1| 16973 15987 -2 - 987 FIG00545467: hypothetical protein - none -
fig|6666666.65904.peg.1747 CDS gi|481785085|gb|ARAV01000005.1| 17043 18332 3 + 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65904.peg.1748 CDS gi|481785085|gb|ARAV01000005.1| 18336 19538 3 + 1203 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1749 CDS gi|481785085|gb|ARAV01000005.1| 20004 19522 -3 - 483 FIG00544625: hypothetical protein - none -
fig|6666666.65904.peg.1750 CDS gi|481785085|gb|ARAV01000005.1| 21438 20071 -3 - 1368 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65904.peg.1751 CDS gi|481785085|gb|ARAV01000005.1| 21709 23085 1 + 1377 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.1752 CDS gi|481785085|gb|ARAV01000005.1| 23086 24285 1 + 1200 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.1753 CDS gi|481785085|gb|ARAV01000005.1| 25016 24291 -2 - 726 hypothetical protein - none -
fig|6666666.65904.peg.1754 CDS gi|481785085|gb|ARAV01000005.1| 27925 25532 -1 - 2394 serine/threonine protein kinase - none -
fig|6666666.65904.peg.1755 CDS gi|481785085|gb|ARAV01000005.1| 28932 27925 -3 - 1008 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.65904.peg.1756 CDS gi|481785085|gb|ARAV01000005.1| 30431 28932 -2 - 1500 FIG00543876: hypothetical protein - none -
fig|6666666.65904.peg.1757 CDS gi|481785085|gb|ARAV01000005.1| 30704 30988 2 + 285 mutT3 - none -
fig|6666666.65904.peg.1758 CDS gi|481785085|gb|ARAV01000005.1| 30981 31973 3 + 993 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.1759 CDS gi|481785085|gb|ARAV01000005.1| 31973 32707 2 + 735 Putative ABC transport system membrane protein - none -
fig|6666666.65904.peg.1760 CDS gi|481785085|gb|ARAV01000005.1| 34084 32951 -1 - 1134 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.65904.peg.1761 CDS gi|481785085|gb|ARAV01000005.1| 35611 34136 -1 - 1476 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.1762 CDS gi|481785085|gb|ARAV01000005.1| 36412 35615 -1 - 798 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65904.peg.1763 CDS gi|481785085|gb|ARAV01000005.1| 37439 36423 -2 - 1017 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65904.peg.1764 CDS gi|481785085|gb|ARAV01000005.1| 38012 37440 -2 - 573 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65904.peg.1765 CDS gi|481785085|gb|ARAV01000005.1| 38029 38253 1 + 225 hypothetical protein - none -
fig|6666666.65904.peg.1766 CDS gi|481785085|gb|ARAV01000005.1| 38273 39034 2 + 762 hypothetical protein - none -
fig|6666666.65904.peg.1767 CDS gi|481785085|gb|ARAV01000005.1| 39034 40167 1 + 1134 Putative cytoplasmic protein - none -
fig|6666666.65904.peg.1768 CDS gi|481785085|gb|ARAV01000005.1| 40158 40721 3 + 564 hypothetical protein - none -
fig|6666666.65904.peg.1769 CDS gi|481785085|gb|ARAV01000005.1| 41109 40726 -3 - 384 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65904.peg.1770 CDS gi|481785085|gb|ARAV01000005.1| 41386 41111 -1 - 276 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65904.peg.1771 CDS gi|481785085|gb|ARAV01000005.1| 41902 41390 -1 - 513 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65904.peg.1772 CDS gi|481785085|gb|ARAV01000005.1| 43740 41902 -3 - 1839 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65904.peg.1773 CDS gi|481785085|gb|ARAV01000005.1| 44224 43733 -1 - 492 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65904.peg.1774 CDS gi|481785085|gb|ARAV01000005.1| 47203 44225 -1 - 2979 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65904.peg.1775 CDS gi|481785085|gb|ARAV01000005.1| 48097 47561 -1 - 537 Acetyl-CoA acetyltransferase - none -
fig|6666666.65904.peg.1776 CDS gi|481785085|gb|ARAV01000005.1| 48699 48394 -3 - 306 hypothetical protein - none -
fig|6666666.65904.peg.1777 CDS gi|481785085|gb|ARAV01000005.1| 49242 49619 3 + 378 hypothetical protein - none -
fig|6666666.65904.peg.1778 CDS gi|481785085|gb|ARAV01000005.1| 50961 49633 -3 - 1329 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65904.peg.1779 CDS gi|481785085|gb|ARAV01000005.1| 51156 52793 3 + 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65904.peg.1780 CDS gi|481785085|gb|ARAV01000005.1| 53267 53479 2 + 213 hypothetical protein - none -
fig|6666666.65904.peg.1781 CDS gi|481785085|gb|ARAV01000005.1| 54376 54570 1 + 195 hypothetical protein - none -
fig|6666666.65904.peg.1782 CDS gi|481785085|gb|ARAV01000005.1| 54666 54812 3 + 147 hypothetical protein - none -
fig|6666666.65904.peg.1783 CDS gi|481785085|gb|ARAV01000005.1| 54962 55861 2 + 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65904.peg.1784 CDS gi|481785085|gb|ARAV01000005.1| 55983 56588 3 + 606 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65904.peg.1785 CDS gi|481785085|gb|ARAV01000005.1| 56674 57894 1 + 1221 putative PS1 protein - none -
fig|6666666.65904.peg.1786 CDS gi|481785085|gb|ARAV01000005.1| 58639 57968 -1 - 672 hypothetical protein - none -
fig|6666666.65904.peg.1787 CDS gi|481785085|gb|ARAV01000005.1| 58973 59263 2 + 291 possible excisionase - none -
fig|6666666.65904.peg.1788 CDS gi|481785085|gb|ARAV01000005.1| 59529 59909 3 + 381 hypothetical protein - none -
fig|6666666.65904.peg.1789 CDS gi|481785085|gb|ARAV01000005.1| 63760 59912 -1 - 3849 putative non-ribosomal peptide synthetase - none -
fig|6666666.65904.peg.1790 CDS gi|481785085|gb|ARAV01000005.1| 64207 63764 -1 - 444 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.1791 CDS gi|481785085|gb|ARAV01000005.1| 64586 64278 -2 - 309 rhodanese-related sulfurtransferase - none -
fig|6666666.65904.peg.1792 CDS gi|481785085|gb|ARAV01000005.1| 64886 65011 2 + 126 hypothetical protein - none -
fig|6666666.65904.peg.1793 CDS gi|481785085|gb|ARAV01000005.1| 65857 65174 -1 - 684 FIG01109761: hypothetical protein - none -
fig|6666666.65904.peg.1794 CDS gi|481785085|gb|ARAV01000005.1| 66464 65991 -2 - 474 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65904.peg.1795 CDS gi|481785085|gb|ARAV01000005.1| 66547 67815 1 + 1269 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1796 CDS gi|481785085|gb|ARAV01000005.1| 67860 68732 3 + 873 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65904.peg.1797 CDS gi|481785085|gb|ARAV01000005.1| 68729 69550 2 + 822 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65904.peg.1798 CDS gi|481785085|gb|ARAV01000005.1| 69547 70209 1 + 663 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65904.peg.1799 CDS gi|481785085|gb|ARAV01000005.1| 70206 70883 3 + 678 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65904.peg.1800 CDS gi|481785085|gb|ARAV01000005.1| 70880 71821 2 + 942 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65904.peg.1801 CDS gi|481785085|gb|ARAV01000005.1| 71911 72531 1 + 621 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65904.peg.1802 CDS gi|481785085|gb|ARAV01000005.1| 72644 75193 2 + 2550 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65904.peg.1803 CDS gi|481785085|gb|ARAV01000005.1| 75174 75782 3 + 609 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65904.peg.1804 CDS gi|481785085|gb|ARAV01000005.1| 75787 76641 1 + 855 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65904.peg.1805 CDS gi|481785085|gb|ARAV01000005.1| 76642 77034 1 + 393 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65904.peg.1806 CDS gi|481785085|gb|ARAV01000005.1| 77034 77522 3 + 489 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65904.peg.1807 CDS gi|481785085|gb|ARAV01000005.1| 77519 77986 2 + 468 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65904.peg.1808 CDS gi|481785085|gb|ARAV01000005.1| 77997 79034 3 + 1038 FIG00544686: hypothetical protein - none -
fig|6666666.65904.peg.1809 CDS gi|481785085|gb|ARAV01000005.1| 79052 79720 2 + 669 Ketopantoate reductase PanG (EC 1.1.1.169) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65904.peg.1810 CDS gi|481785085|gb|ARAV01000005.1| 79722 80522 3 + 801 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65904.peg.1811 CDS gi|481785085|gb|ARAV01000005.1| 81164 80538 -2 - 627 Rrf2-linked NADH-flavin reductase - none -
fig|6666666.65904.peg.1812 CDS gi|481785085|gb|ARAV01000005.1| 81264 81635 3 + 372 Transcriptional regulator, HxlR family - none -
fig|6666666.65904.peg.1813 CDS gi|481785085|gb|ARAV01000005.1| 83801 81711 -2 - 2091 Putative phosphatase - none -
fig|6666666.65904.peg.1814 CDS gi|481785085|gb|ARAV01000005.1| 84087 85256 3 + 1170 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.65904.peg.1815 CDS gi|481785085|gb|ARAV01000005.1| 85288 86835 1 + 1548 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65904.peg.1816 CDS gi|481785085|gb|ARAV01000005.1| 87997 86813 -1 - 1185 hypothetical protein - none -
fig|6666666.65904.peg.1817 CDS gi|481785085|gb|ARAV01000005.1| 89261 88044 -2 - 1218 hypothetical protein - none -
fig|6666666.65904.peg.1818 CDS gi|481785085|gb|ARAV01000005.1| 90720 89296 -3 - 1425 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65904.peg.1819 CDS gi|481785085|gb|ARAV01000005.1| 90967 92418 1 + 1452 putative transport protein - none -
fig|6666666.65904.peg.1820 CDS gi|481785085|gb|ARAV01000005.1| 92604 93398 3 + 795 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65904.peg.1821 CDS gi|481785085|gb|ARAV01000005.1| 93802 95883 1 + 2082 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.65904.peg.1822 CDS gi|481785085|gb|ARAV01000005.1| 95896 96762 1 + 867 Beta-glucoside bgl operon antiterminator, BglG family Beta-Glucoside Metabolism
fig|6666666.65904.peg.1823 CDS gi|481785085|gb|ARAV01000005.1| 96769 98460 1 + 1692 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.65904.peg.1824 CDS gi|481785085|gb|ARAV01000005.1| 98861 99874 2 + 1014 2-Oxobutyrate oxidase, putative Methionine Degradation
fig|6666666.65904.peg.1825 CDS gi|481785085|gb|ARAV01000005.1| 99881 100687 2 + 807 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.1826 CDS gi|481785085|gb|ARAV01000005.1| 100848 103604 3 + 2757 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65904.peg.1827 CDS gi|481785085|gb|ARAV01000005.1| 104993 103692 -2 - 1302 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65904.peg.1828 CDS gi|481785085|gb|ARAV01000005.1| 105034 105204 1 + 171 FIG00543978: hypothetical protein - none -
fig|6666666.65904.peg.1829 CDS gi|481785085|gb|ARAV01000005.1| 106091 105207 -2 - 885 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65904.peg.1830 CDS gi|481785085|gb|ARAV01000005.1| 106102 106716 1 + 615 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.65904.peg.1831 CDS gi|481785085|gb|ARAV01000005.1| 106852 107478 1 + 627 FIG00544149: hypothetical protein - none -
fig|6666666.65904.peg.1832 CDS gi|481785085|gb|ARAV01000005.1| 108039 107467 -3 - 573 hydrolase, putative isochorismatase - none -
fig|6666666.65904.peg.1833 CDS gi|481785085|gb|ARAV01000005.1| 109513 108053 -1 - 1461 Purine-cytosine permease - none -
fig|6666666.65904.peg.1834 CDS gi|481785085|gb|ARAV01000005.1| 110691 109660 -3 - 1032 DNA integrity scanning protein disA - none -
fig|6666666.65904.peg.1835 CDS gi|481785085|gb|ARAV01000005.1| 111995 110727 -2 - 1269 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65904.peg.1836 CDS gi|481785085|gb|ARAV01000005.1| 112816 112220 -1 - 597 hypothetical protein - none -
fig|6666666.65904.peg.1837 CDS gi|481785085|gb|ARAV01000005.1| 113123 113713 2 + 591 CarD-like transcriptional regulator - none -
fig|6666666.65904.peg.1838 CDS gi|481785085|gb|ARAV01000005.1| 113719 114456 1 + 738 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65904.peg.1839 CDS gi|481785085|gb|ARAV01000005.1| 114604 114948 1 + 345 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65904.peg.1840 CDS gi|481785085|gb|ARAV01000005.1| 114948 115685 3 + 738 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65904.peg.1841 CDS gi|481785085|gb|ARAV01000005.1| 115696 116490 1 + 795 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.65904.peg.1842 CDS gi|481785085|gb|ARAV01000005.1| 116538 117929 3 + 1392 Cysteinyl-tRNA synthetase (EC 6.1.1.16) Zinc regulated enzymes;
tRNA aminoacylation, Cys
fig|6666666.65904.peg.1843 CDS gi|481785085|gb|ARAV01000005.1| 117957 118898 3 + 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.65904.peg.1844 CDS gi|481785085|gb|ARAV01000005.1| 119861 119046 -2 - 816 LpqC - none -
fig|6666666.65904.peg.1845 CDS gi|481785085|gb|ARAV01000005.1| 120762 119872 -3 - 891 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65904.peg.1846 CDS gi|481785085|gb|ARAV01000005.1| 121464 120763 -3 - 702 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65904.peg.1847 CDS gi|481785085|gb|ARAV01000005.1| 122572 121565 -1 - 1008 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65904.peg.1848 CDS gi|481785085|gb|ARAV01000005.1| 122736 123845 3 + 1110 Transcriptional regulator, LacI family - none -
fig|6666666.65904.peg.1849 CDS gi|481785085|gb|ARAV01000005.1| 124558 123803 -1 - 756 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65904.peg.1850 CDS gi|481785085|gb|ARAV01000005.1| 125028 124555 -3 - 474 hypothetical protein - none -
fig|6666666.65904.peg.1851 CDS gi|481785085|gb|ARAV01000005.1| 126347 125028 -2 - 1320 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.65904.peg.1852 CDS gi|481785085|gb|ARAV01000005.1| 126699 126370 -3 - 330 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65904.peg.1853 CDS gi|481785085|gb|ARAV01000005.1| 128309 126801 -2 - 1509 Putative amino acid export carrier protein - none -
fig|6666666.65904.peg.1854 CDS gi|481785085|gb|ARAV01000005.1| 128405 129358 2 + 954 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.1855 CDS gi|481785085|gb|ARAV01000005.1| 130851 129508 -3 - 1344 Permease - none -
fig|6666666.65904.peg.1856 CDS gi|481785085|gb|ARAV01000005.1| 130976 131689 2 + 714 two-component system, response regulator - none -
fig|6666666.65904.peg.1857 CDS gi|481785085|gb|ARAV01000005.1| 131873 133294 2 + 1422 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.65904.peg.1858 CDS gi|481785085|gb|ARAV01000005.1| 133329 134099 3 + 771 transcriptional regulator, MerR family - none -
fig|6666666.65904.peg.1859 CDS gi|481785085|gb|ARAV01000005.1| 134528 134103 -2 - 426 HIT family protein - none -
fig|6666666.65904.peg.1860 CDS gi|481785085|gb|ARAV01000005.1| 134527 135810 1 + 1284 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1861 CDS gi|481785085|gb|ARAV01000005.1| 135820 136986 1 + 1167 Valine--pyruvate aminotransferase (EC 2.6.1.66) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65904.peg.1862 CDS gi|481785085|gb|ARAV01000005.1| 137026 138456 1 + 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65904.peg.1863 CDS gi|481785085|gb|ARAV01000005.1| 138521 139414 2 + 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1864 CDS gi|481785085|gb|ARAV01000005.1| 139461 141584 3 + 2124 Protease II (EC 3.4.21.83) - none -
fig|6666666.65904.peg.1865 CDS gi|481785085|gb|ARAV01000005.1| 141651 142331 3 + 681 FIG00546625: hypothetical protein - none -
fig|6666666.65904.peg.1866 CDS gi|481785085|gb|ARAV01000005.1| 142341 142832 3 + 492 Glutathione peroxidase (EC 1.11.1.9) Glutathione: Redox cycle
fig|6666666.65904.peg.1867 CDS gi|481785085|gb|ARAV01000005.1| 145506 142903 -3 - 2604 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.65904.peg.1868 CDS gi|481785085|gb|ARAV01000005.1| 145960 146166 1 + 207 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1869 CDS gi|481785085|gb|ARAV01000005.1| 146163 146834 3 + 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1870 CDS gi|481785085|gb|ARAV01000005.1| 146838 149111 3 + 2274 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1871 CDS gi|481785085|gb|ARAV01000005.1| 150260 149130 -2 - 1131 Antigen 85-B precursor (85B) (Extracellular alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl transferase 85B) (EC 2.3.1.-) - none -
fig|6666666.65904.peg.1872 CDS gi|481785085|gb|ARAV01000005.1| 150544 151092 1 + 549 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.65904.peg.1873 CDS gi|481785085|gb|ARAV01000005.1| 152120 151113 -2 - 1008 acyl-CoA hydrolase - none -
fig|6666666.65904.peg.1874 CDS gi|481785085|gb|ARAV01000005.1| 152696 154204 2 + 1509 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1875 CDS gi|481785085|gb|ARAV01000005.1| 154210 155304 1 + 1095 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65904.peg.1876 CDS gi|481785085|gb|ARAV01000005.1| 155602 155384 -1 - 219 FIG00544089: hypothetical protein - none -
fig|6666666.65904.peg.1877 CDS gi|481785085|gb|ARAV01000005.1| 156837 155749 -3 - 1089 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65904.peg.1878 CDS gi|481785085|gb|ARAV01000005.1| 156881 157807 2 + 927 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65904.peg.1879 CDS gi|481785085|gb|ARAV01000005.1| 158448 157804 -3 - 645 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65904.peg.1880 CDS gi|481785085|gb|ARAV01000005.1| 159238 158429 -1 - 810 hypothetical protein - none -
fig|6666666.65904.peg.1881 CDS gi|481785085|gb|ARAV01000005.1| 159267 160166 3 + 900 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65904.peg.1882 CDS gi|481785085|gb|ARAV01000005.1| 160477 161604 1 + 1128 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65904.peg.1883 CDS gi|481785085|gb|ARAV01000005.1| 161848 162942 1 + 1095 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65904.peg.1884 CDS gi|481785085|gb|ARAV01000005.1| 162984 163874 3 + 891 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65904.peg.1885 CDS gi|481785085|gb|ARAV01000005.1| 163910 164683 2 + 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65904.peg.1886 CDS gi|481785085|gb|ARAV01000005.1| 164874 165647 3 + 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65904.peg.1887 CDS gi|481785085|gb|ARAV01000005.1| 165702 166826 3 + 1125 putative cytochrome P450 hydroxylase - none -
fig|6666666.65904.peg.1888 CDS gi|481785085|gb|ARAV01000005.1| 167578 166823 -1 - 756 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65904.peg.1889 CDS gi|481785085|gb|ARAV01000005.1| 168764 167640 -2 - 1125 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65904.peg.1890 CDS gi|481785085|gb|ARAV01000005.1| 169087 170589 1 + 1503 putative coenzyme A transferase - none -
fig|6666666.65904.peg.1891 CDS gi|481785085|gb|ARAV01000005.1| 172247 170721 -2 - 1527 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65904.peg.1892 CDS gi|481785085|gb|ARAV01000005.1| 173794 172244 -1 - 1551 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65904.peg.1893 CDS gi|481785085|gb|ARAV01000005.1| 174802 173798 -1 - 1005 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65904.peg.1894 CDS gi|481785085|gb|ARAV01000005.1| 176410 174803 -1 - 1608 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65904.peg.1895 CDS gi|481785085|gb|ARAV01000005.1| 177329 177204 -2 - 126 hypothetical protein - none -
fig|6666666.65904.peg.1896 CDS gi|481785085|gb|ARAV01000005.1| 177603 177803 3 + 201 hypothetical protein - none -
fig|6666666.65904.peg.1897 CDS gi|481785085|gb|ARAV01000005.1| 177995 179875 2 + 1881 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65904.peg.1898 CDS gi|481785085|gb|ARAV01000005.1| 179910 180395 3 + 486 GCN5-related N-acetyltransferase - none -
fig|6666666.65904.peg.1899 CDS gi|481785085|gb|ARAV01000005.1| 182360 180348 -2 - 2013 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65904.peg.1900 CDS gi|481785085|gb|ARAV01000005.1| 182710 183711 1 + 1002 FIG00546468: hypothetical protein - none -
fig|6666666.65904.peg.1901 CDS gi|481785085|gb|ARAV01000005.1| 184069 183692 -1 - 378 Repressor CsoR of the copZA operon Copper Transport System
fig|6666666.65904.peg.1902 CDS gi|481785085|gb|ARAV01000005.1| 184964 185263 2 + 300 hypothetical protein - none -
fig|6666666.65904.peg.1903 CDS gi|481785085|gb|ARAV01000005.1| 185867 185298 -2 - 570 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65904.peg.1904 CDS gi|481785085|gb|ARAV01000005.1| 186938 186003 -2 - 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65904.peg.1905 CDS gi|481785085|gb|ARAV01000005.1| 187290 188129 3 + 840 Putative transcriptional regulator - none -
fig|6666666.65904.peg.1906 CDS gi|481785085|gb|ARAV01000005.1| 188183 189421 2 + 1239 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65904.peg.1907 CDS gi|481785090|gb|ARAV01000004.1| 15 1262 3 + 1248 Acetyl-coenzyme A synthetase (EC 6.2.1.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.1908 CDS gi|481785090|gb|ARAV01000004.1| 1284 2159 3 + 876 Far-related protein - none -
fig|6666666.65904.peg.1909 CDS gi|481785090|gb|ARAV01000004.1| 2169 2597 3 + 429 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.1910 CDS gi|481785090|gb|ARAV01000004.1| 3375 2605 -3 - 771 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) - none -
fig|6666666.65904.peg.1911 CDS gi|481785090|gb|ARAV01000004.1| 4632 3415 -3 - 1218 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65904.peg.1912 CDS gi|481785090|gb|ARAV01000004.1| 5230 4730 -1 - 501 16S rRNA processing protein RimM - none -
fig|6666666.65904.peg.1913 CDS gi|481785090|gb|ARAV01000004.1| 5300 5710 2 + 411 FIG00544922: hypothetical protein - none -
fig|6666666.65904.peg.1914 CDS gi|481785090|gb|ARAV01000004.1| 6284 5775 -2 - 510 SSU ribosomal protein S16p - none -
fig|6666666.65904.peg.1915 CDS gi|481785090|gb|ARAV01000004.1| 6576 8684 3 + 2109 O-antigen acetylase - none -
fig|6666666.65904.peg.1916 CDS gi|481785090|gb|ARAV01000004.1| 8696 10957 2 + 2262 O-antigen acetylase - none -
fig|6666666.65904.peg.1917 CDS gi|481785090|gb|ARAV01000004.1| 12672 11047 -3 - 1626 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65904.peg.1918 CDS gi|481785090|gb|ARAV01000004.1| 13176 12832 -3 - 345 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.65904.peg.1919 CDS gi|481785090|gb|ARAV01000004.1| 14574 13177 -3 - 1398 Ammonium transporter Ammonia assimilation
fig|6666666.65904.peg.1920 CDS gi|481785090|gb|ARAV01000004.1| 16769 14817 -2 - 1953 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65904.peg.1921 CDS gi|481785090|gb|ARAV01000004.1| 20336 16830 -2 - 3507 Chromosome partition protein smc - none -
fig|6666666.65904.peg.1922 CDS gi|481785090|gb|ARAV01000004.1| 20637 20353 -3 - 285 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.1923 CDS gi|481785090|gb|ARAV01000004.1| 20840 20649 -2 - 192 hypothetical protein - none -
fig|6666666.65904.peg.1924 CDS gi|481785090|gb|ARAV01000004.1| 21719 20898 -2 - 822 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65904.peg.1925 CDS gi|481785090|gb|ARAV01000004.1| 22484 21720 -2 - 765 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65904.peg.1926 CDS gi|481785090|gb|ARAV01000004.1| 22912 22481 -1 - 432 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65904.peg.1927 CDS gi|481785090|gb|ARAV01000004.1| 23846 23052 -2 - 795 Cell division initiation protein - none -
fig|6666666.65904.peg.1928 CDS gi|481785090|gb|ARAV01000004.1| 23861 23989 2 + 129 hypothetical protein - none -
fig|6666666.65904.peg.1929 CDS gi|481785090|gb|ARAV01000004.1| 25348 23999 -1 - 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65904.peg.1930 CDS gi|481785090|gb|ARAV01000004.1| 25537 26682 1 + 1146 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65904.peg.1931 CDS gi|481785090|gb|ARAV01000004.1| 27053 26652 -2 - 402 FIG00544156: hypothetical protein - none -
fig|6666666.65904.peg.1932 CDS gi|481785090|gb|ARAV01000004.1| 27084 28415 3 + 1332 No significant database matches - none -
fig|6666666.65904.peg.1933 CDS gi|481785090|gb|ARAV01000004.1| 28554 29858 3 + 1305 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.1934 CDS gi|481785090|gb|ARAV01000004.1| 29962 32355 1 + 2394 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65904.peg.1935 CDS gi|481785090|gb|ARAV01000004.1| 34077 32695 -3 - 1383 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65904.peg.1936 CDS gi|481785090|gb|ARAV01000004.1| 35218 34232 -1 - 987 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65904.peg.1937 CDS gi|481785090|gb|ARAV01000004.1| 36091 35276 -1 - 816 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65904.peg.1938 CDS gi|481785090|gb|ARAV01000004.1| 36924 36262 -3 - 663 FIG00545012: hypothetical protein - none -
fig|6666666.65904.peg.1939 CDS gi|481785090|gb|ARAV01000004.1| 37312 36956 -1 - 357 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65904.peg.1940 CDS gi|481785090|gb|ARAV01000004.1| 38091 37315 -3 - 777 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.65904.peg.1941 CDS gi|481785090|gb|ARAV01000004.1| 38927 38136 -2 - 792 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65904.peg.1942 CDS gi|481785090|gb|ARAV01000004.1| 39682 38945 -1 - 738 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.65904.peg.1943 CDS gi|481785090|gb|ARAV01000004.1| 40363 39725 -1 - 639 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.65904.peg.1944 CDS gi|481785090|gb|ARAV01000004.1| 41698 40409 -1 - 1290 putative transport protein - none -
fig|6666666.65904.peg.1945 CDS gi|481785090|gb|ARAV01000004.1| 41973 41812 -3 - 162 hypothetical protein - none -
fig|6666666.65904.peg.1946 CDS gi|481785090|gb|ARAV01000004.1| 42630 42028 -3 - 603 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.65904.peg.1947 CDS gi|481785090|gb|ARAV01000004.1| 43757 42633 -2 - 1125 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.65904.peg.1948 CDS gi|481785090|gb|ARAV01000004.1| 45088 43757 -1 - 1332 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.65904.peg.1949 CDS gi|481785090|gb|ARAV01000004.1| 45298 46326 1 + 1029 hypothetical protein - none -
fig|6666666.65904.peg.1950 CDS gi|481785090|gb|ARAV01000004.1| 46905 46330 -3 - 576 hypothetical protein - none -
fig|6666666.65904.peg.1951 CDS gi|481785090|gb|ARAV01000004.1| 47679 46945 -3 - 735 hypothetical protein - none -
fig|6666666.65904.peg.1952 CDS gi|481785090|gb|ARAV01000004.1| 48035 48586 2 + 552 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.65904.peg.1953 CDS gi|481785090|gb|ARAV01000004.1| 48638 51031 2 + 2394 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65904.peg.1954 CDS gi|481785090|gb|ARAV01000004.1| 51122 52501 2 + 1380 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65904.peg.1955 CDS gi|481785090|gb|ARAV01000004.1| 53320 55839 1 + 2520 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65904.peg.1956 CDS gi|481785090|gb|ARAV01000004.1| 55891 56895 1 + 1005 FIG00544169: hypothetical protein - none -
fig|6666666.65904.peg.1957 CDS gi|481785090|gb|ARAV01000004.1| 57276 56896 -3 - 381 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65904.peg.1958 CDS gi|481785090|gb|ARAV01000004.1| 57531 57304 -3 - 228 FIG00544856: hypothetical protein - none -
fig|6666666.65904.peg.1959 CDS gi|481785090|gb|ARAV01000004.1| 58222 57575 -1 - 648 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.65904.peg.1960 CDS gi|481785090|gb|ARAV01000004.1| 58275 60014 3 + 1740 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) Trehalose Biosynthesis
fig|6666666.65904.peg.1961 CDS gi|481785090|gb|ARAV01000004.1| 61283 60048 -2 - 1236 Threonine dehydratase (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis;
Threonine degradation
fig|6666666.65904.peg.1962 CDS gi|481785090|gb|ARAV01000004.1| 61535 63319 2 + 1785 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.65904.peg.1963 CDS gi|481785090|gb|ARAV01000004.1| 63411 63764 3 + 354 hypothetical protein - none -
fig|6666666.65904.peg.1964 CDS gi|481785090|gb|ARAV01000004.1| 65060 63852 -2 - 1209 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.65904.peg.1965 CDS gi|481785090|gb|ARAV01000004.1| 66407 65193 -2 - 1215 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.65904.peg.1966 CDS gi|481785090|gb|ARAV01000004.1| 70123 66563 -1 - 3561 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65904.peg.1967 CDS gi|481785090|gb|ARAV01000004.1| 71401 70172 -1 - 1230 hypothetical protein - none -
fig|6666666.65904.peg.1968 CDS gi|481785090|gb|ARAV01000004.1| 71540 72412 2 + 873 Protein rarD - none -
fig|6666666.65904.peg.1969 CDS gi|481785090|gb|ARAV01000004.1| 73030 72434 -1 - 597 hypothetical protein - none -
fig|6666666.65904.peg.1970 CDS gi|481785090|gb|ARAV01000004.1| 73953 73027 -3 - 927 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65904.peg.1971 CDS gi|481785090|gb|ARAV01000004.1| 74528 73950 -2 - 579 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65904.peg.1972 CDS gi|481785090|gb|ARAV01000004.1| 74732 75601 2 + 870 hypothetical protein - none -
fig|6666666.65904.peg.1973 CDS gi|481785090|gb|ARAV01000004.1| 75672 77366 3 + 1695 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.1974 CDS gi|481785090|gb|ARAV01000004.1| 77966 77370 -2 - 597 Putative secreted protein - none -
fig|6666666.65904.peg.1975 CDS gi|481785090|gb|ARAV01000004.1| 78104 79033 2 + 930 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65904.peg.1976 CDS gi|481785090|gb|ARAV01000004.1| 80345 79041 -2 - 1305 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65904.peg.1977 CDS gi|481785090|gb|ARAV01000004.1| 81249 80443 -3 - 807 permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.65904.peg.1978 CDS gi|481785090|gb|ARAV01000004.1| 81460 82851 1 + 1392 hypothetical protein - none -
fig|6666666.65904.peg.1979 CDS gi|481785090|gb|ARAV01000004.1| 86108 82920 -2 - 3189 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65904.peg.1980 CDS gi|481785090|gb|ARAV01000004.1| 87801 86671 -3 - 1131 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.65904.peg.1981 CDS gi|481785090|gb|ARAV01000004.1| 88344 88063 -3 - 282 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65904.peg.1982 CDS gi|481785090|gb|ARAV01000004.1| 88957 88466 -1 - 492 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65904.peg.1983 CDS gi|481785090|gb|ARAV01000004.1| 89734 89015 -1 - 720 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65904.peg.1984 CDS gi|481785090|gb|ARAV01000004.1| 90468 89734 -3 - 735 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65904.peg.1985 CDS gi|481785090|gb|ARAV01000004.1| 91713 90487 -3 - 1227 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65904.peg.1986 CDS gi|481785090|gb|ARAV01000004.1| 92568 91891 -3 - 678 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65904.peg.1987 CDS gi|481785090|gb|ARAV01000004.1| 94043 92574 -2 - 1470 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65904.peg.1988 CDS gi|481785090|gb|ARAV01000004.1| 95206 94118 -1 - 1089 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1989 CDS gi|481785090|gb|ARAV01000004.1| 96789 95254 -3 - 1536 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65904.peg.1990 CDS gi|481785090|gb|ARAV01000004.1| 98252 96795 -2 - 1458 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65904.peg.1991 CDS gi|481785090|gb|ARAV01000004.1| 99358 98252 -1 - 1107 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1992 CDS gi|481785090|gb|ARAV01000004.1| 100918 99365 -1 - 1554 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65904.peg.1993 CDS gi|481785090|gb|ARAV01000004.1| 102465 100915 -3 - 1551 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65904.peg.1994 CDS gi|481785090|gb|ARAV01000004.1| 104501 102540 -2 - 1962 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.1995 CDS gi|481785090|gb|ARAV01000004.1| 105365 104625 -2 - 741 FIG00544004: hypothetical protein - none -
fig|6666666.65904.peg.1996 CDS gi|481785090|gb|ARAV01000004.1| 106438 105437 -1 - 1002 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65904.peg.1997 CDS gi|481785090|gb|ARAV01000004.1| 107054 106620 -2 - 435 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65904.peg.1998 CDS gi|481785090|gb|ARAV01000004.1| 108010 107600 -1 - 411 Possible membrane protein - none -
fig|6666666.65904.peg.1999 CDS gi|481785090|gb|ARAV01000004.1| 108534 108136 -3 - 399 hypothetical protein - none -
fig|6666666.65904.peg.2000 CDS gi|481785090|gb|ARAV01000004.1| 108848 109405 2 + 558 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65904.peg.2001 CDS gi|481785090|gb|ARAV01000004.1| 109516 110640 1 + 1125 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.65904.peg.2002 CDS gi|481785090|gb|ARAV01000004.1| 110640 112133 3 + 1494 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65904.peg.2003 CDS gi|481785090|gb|ARAV01000004.1| 112467 112102 -3 - 366 Conserved hypothetical regulatory protein - none -
fig|6666666.65904.peg.2004 CDS gi|481785090|gb|ARAV01000004.1| 112537 114816 1 + 2280 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65904.peg.2005 CDS gi|481785090|gb|ARAV01000004.1| 116294 114900 -2 - 1395 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.2006 CDS gi|481785090|gb|ARAV01000004.1| 116871 116362 -3 - 510 FIG00544385: hypothetical protein - none -
fig|6666666.65904.peg.2007 CDS gi|481785090|gb|ARAV01000004.1| 117139 116951 -1 - 189 hypothetical protein - none -
fig|6666666.65904.peg.2008 CDS gi|481785090|gb|ARAV01000004.1| 118346 117147 -2 - 1200 hypothetical membrane protein - none -
fig|6666666.65904.peg.2009 CDS gi|481785090|gb|ARAV01000004.1| 119221 118478 -1 - 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.2010 CDS gi|481785090|gb|ARAV01000004.1| 120224 119214 -2 - 1011 ROK family protein (putative glucokinase) - none -
fig|6666666.65904.peg.2011 CDS gi|481785090|gb|ARAV01000004.1| 121390 120236 -1 - 1155 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65904.peg.2012 CDS gi|481785090|gb|ARAV01000004.1| 122455 121391 -1 - 1065 NLP/P60 family protein - none -
fig|6666666.65904.peg.2013 CDS gi|481785090|gb|ARAV01000004.1| 123429 122674 -3 - 756 putative secreted protein - none -
fig|6666666.65904.peg.2014 CDS gi|481785090|gb|ARAV01000004.1| 125695 124076 -1 - 1620 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65904.peg.2015 CDS gi|481785090|gb|ARAV01000004.1| 126915 125695 -3 - 1221 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65904.peg.2016 CDS gi|481785090|gb|ARAV01000004.1| 127757 126912 -2 - 846 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65904.peg.2017 CDS gi|481785090|gb|ARAV01000004.1| 128429 127809 -2 - 621 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65904.peg.2018 CDS gi|481785090|gb|ARAV01000004.1| 129431 129000 -2 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.65904.peg.2019 CDS gi|481785090|gb|ARAV01000004.1| 130544 129450 -2 - 1095 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65904.peg.2020 CDS gi|481785090|gb|ARAV01000004.1| 131030 132934 2 + 1905 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65904.peg.2021 CDS gi|481785090|gb|ARAV01000004.1| 133649 132924 -2 - 726 hypothetical protein - none -
fig|6666666.65904.peg.2022 CDS gi|481785090|gb|ARAV01000004.1| 134092 133748 -1 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65904.peg.2023 CDS gi|481785090|gb|ARAV01000004.1| 134291 135001 2 + 711 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65904.peg.2024 CDS gi|481785090|gb|ARAV01000004.1| 135058 136065 1 + 1008 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.65904.peg.2025 CDS gi|481785090|gb|ARAV01000004.1| 137295 136177 -3 - 1119 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65904.peg.2026 CDS gi|481785090|gb|ARAV01000004.1| 137358 138824 3 + 1467 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65904.peg.2027 CDS gi|481785090|gb|ARAV01000004.1| 138886 139332 1 + 447 PAS/PAC domain (EC 2.7.3.-) - none -
fig|6666666.65904.peg.2028 CDS gi|481785090|gb|ARAV01000004.1| 139654 139382 -1 - 273 Putative oxidoreductase - none -
fig|6666666.65904.peg.2029 CDS gi|481785090|gb|ARAV01000004.1| 139916 141940 2 + 2025 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.65904.peg.2030 CDS gi|481785090|gb|ARAV01000004.1| 142089 144950 3 + 2862 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65904.peg.2031 CDS gi|481785090|gb|ARAV01000004.1| 144972 146039 3 + 1068 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65904.peg.2032 CDS gi|481785090|gb|ARAV01000004.1| 146043 146432 3 + 390 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65904.peg.2033 CDS gi|481785090|gb|ARAV01000004.1| 146444 147220 2 + 777 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65904.peg.2034 CDS gi|481785090|gb|ARAV01000004.1| 147281 148324 2 + 1044 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65904.peg.2035 CDS gi|481785090|gb|ARAV01000004.1| 148434 149231 3 + 798 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65904.peg.2036 CDS gi|481785090|gb|ARAV01000004.1| 149949 149476 -3 - 474 FIG00543905: hypothetical protein - none -
fig|6666666.65904.peg.2037 CDS gi|481785090|gb|ARAV01000004.1| 150078 151514 3 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.2038 CDS gi|481785090|gb|ARAV01000004.1| 152177 151566 -2 - 612 hypothetical protein - none -
fig|6666666.65904.peg.2039 CDS gi|481785090|gb|ARAV01000004.1| 152854 152165 -1 - 690 hypothetical protein - none -
fig|6666666.65904.peg.2040 CDS gi|481785090|gb|ARAV01000004.1| 153415 152879 -1 - 537 hypothetical protein - none -
fig|6666666.65904.peg.2041 CDS gi|481785090|gb|ARAV01000004.1| 153495 154346 3 + 852 hypothetical protein - none -
fig|6666666.65904.peg.2042 CDS gi|481785090|gb|ARAV01000004.1| 154398 155030 3 + 633 hypothetical protein - none -
fig|6666666.65904.peg.2043 CDS gi|481785090|gb|ARAV01000004.1| 155998 155039 -1 - 960 hypothetical protein - none -
fig|6666666.65904.peg.2044 CDS gi|481785090|gb|ARAV01000004.1| 156150 156001 -3 - 150 hypothetical protein - none -
fig|6666666.65904.peg.2045 CDS gi|481785090|gb|ARAV01000004.1| 157619 156171 -2 - 1449 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65904.peg.2046 CDS gi|481785090|gb|ARAV01000004.1| 157726 159069 1 + 1344 FIG00545265: hypothetical protein - none -
fig|6666666.65904.peg.2047 CDS gi|481785090|gb|ARAV01000004.1| 159362 159084 -2 - 279 FIG00544676: hypothetical protein - none -
fig|6666666.65904.peg.2048 CDS gi|481785090|gb|ARAV01000004.1| 162523 159443 -1 - 3081 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.65904.peg.2049 CDS gi|481785090|gb|ARAV01000004.1| 163873 162545 -1 - 1329 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65904.peg.2050 CDS gi|481785090|gb|ARAV01000004.1| 163978 165579 1 + 1602 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65904.peg.2051 CDS gi|481785090|gb|ARAV01000004.1| 165795 165580 -3 - 216 FIG00544054: hypothetical protein - none -
fig|6666666.65904.peg.2052 CDS gi|481785090|gb|ARAV01000004.1| 165902 167125 2 + 1224 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.65904.peg.2053 CDS gi|481785090|gb|ARAV01000004.1| 168519 167122 -3 - 1398 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65904.peg.2054 CDS gi|481785090|gb|ARAV01000004.1| 169088 169318 2 + 231 Copper chaperone Copper homeostasis
fig|6666666.65904.peg.2055 CDS gi|481785090|gb|ARAV01000004.1| 170474 169332 -2 - 1143 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.65904.peg.2056 CDS gi|481785090|gb|ARAV01000004.1| 171142 170471 -1 - 672 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.65904.peg.2057 CDS gi|481785090|gb|ARAV01000004.1| 172288 171158 -1 - 1131 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.65904.peg.2058 CDS gi|481785090|gb|ARAV01000004.1| 172287 172988 3 + 702 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.65904.peg.2059 CDS gi|481785090|gb|ARAV01000004.1| 172975 173454 1 + 480 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.65904.peg.2060 CDS gi|481785090|gb|ARAV01000004.1| 173461 174396 1 + 936 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65904.peg.2061 CDS gi|481785090|gb|ARAV01000004.1| 174426 175031 3 + 606 hypothetical protein - none -
fig|6666666.65904.peg.2062 CDS gi|481785090|gb|ARAV01000004.1| 175860 175522 -3 - 339 hypothetical protein - none -
fig|6666666.65904.peg.2063 CDS gi|481785090|gb|ARAV01000004.1| 176251 175832 -1 - 420 hypothetical protein - none -
fig|6666666.65904.peg.2064 CDS gi|481785090|gb|ARAV01000004.1| 176796 176338 -3 - 459 hypothetical protein - none -
fig|6666666.65904.peg.2065 CDS gi|481785090|gb|ARAV01000004.1| 178067 176796 -2 - 1272 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.65904.peg.2066 CDS gi|481785090|gb|ARAV01000004.1| 179456 178242 -2 - 1215 Basic proline-rich protein - none -
fig|6666666.65904.peg.2067 CDS gi|481785090|gb|ARAV01000004.1| 179598 179780 3 + 183 hypothetical protein - none -
fig|6666666.65904.peg.2068 CDS gi|481785090|gb|ARAV01000004.1| 180703 179840 -1 - 864 Mycobacteriophage lysis protein, LysB # Pham73 - none -
fig|6666666.65904.peg.2069 CDS gi|481785090|gb|ARAV01000004.1| 180990 180790 -3 - 201 hypothetical protein - none -
fig|6666666.65904.peg.2070 CDS gi|481785090|gb|ARAV01000004.1| 181328 181212 -2 - 117 hypothetical protein - none -
fig|6666666.65904.peg.2071 CDS gi|481785090|gb|ARAV01000004.1| 181809 181369 -3 - 441 gp4 - none -
fig|6666666.65904.peg.2072 CDS gi|481785090|gb|ARAV01000004.1| 182196 181954 -3 - 243 hypothetical protein - none -
fig|6666666.65904.peg.2073 CDS gi|481785090|gb|ARAV01000004.1| 182379 182197 -3 - 183 hypothetical protein - none -
fig|6666666.65904.peg.2074 CDS gi|481785090|gb|ARAV01000004.1| 183587 182490 -2 - 1098 hypothetical protein - none -
fig|6666666.65904.peg.2075 CDS gi|481785090|gb|ARAV01000004.1| 184886 183588 -2 - 1299 hypothetical protein - none -
fig|6666666.65904.peg.2076 CDS gi|481785090|gb|ARAV01000004.1| 185278 184898 -1 - 381 hypothetical protein - none -
fig|6666666.65904.peg.2077 CDS gi|481785090|gb|ARAV01000004.1| 188832 185770 -3 - 3063 Phage tail length tape-measure protein # pham13 Phage tail proteins;
Phage tail proteins 2
fig|6666666.65904.peg.2078 CDS gi|481785090|gb|ARAV01000004.1| 189045 188848 -3 - 198 hypothetical protein - none -
fig|6666666.65904.peg.2079 CDS gi|481785090|gb|ARAV01000004.1| 189692 189252 -2 - 441 hypothetical protein - none -
fig|6666666.65904.peg.2080 CDS gi|481785090|gb|ARAV01000004.1| 190409 189792 -2 - 618 gp22 - none -
fig|6666666.65904.peg.2081 CDS gi|481785090|gb|ARAV01000004.1| 190812 190402 -3 - 411 hypothetical protein - none -
fig|6666666.65904.peg.2082 CDS gi|481785090|gb|ARAV01000004.1| 191135 190812 -2 - 324 hypothetical protein - none -
fig|6666666.65904.peg.2083 CDS gi|481785090|gb|ARAV01000004.1| 191490 191128 -3 - 363 hypothetical protein - none -
fig|6666666.65904.peg.2084 CDS gi|481785090|gb|ARAV01000004.1| 191942 191490 -2 - 453 hypothetical protein - none -
fig|6666666.65904.peg.2085 CDS gi|481785090|gb|ARAV01000004.1| 193088 192015 -2 - 1074 hypothetical protein - none -
fig|6666666.65904.peg.2086 CDS gi|481785090|gb|ARAV01000004.1| 193681 193100 -1 - 582 hypothetical protein - none -
fig|6666666.65904.peg.2087 CDS gi|481785090|gb|ARAV01000004.1| 194863 193745 -1 - 1119 hypothetical protein - none -
fig|6666666.65904.peg.2088 CDS gi|481785090|gb|ARAV01000004.1| 195254 194856 -2 - 399 putative portal gp5 - none -
fig|6666666.65904.peg.2089 CDS gi|481785095|gb|ARAV01000003.1| 2171 210 -2 - 1962 Non-ribosomal peptide synthetase, terminal component - none -
fig|6666666.65904.peg.2090 CDS gi|481785095|gb|ARAV01000003.1| 3404 2379 -2 - 1026 putative non-ribosomal peptide synthetase - none -
fig|6666666.65904.peg.2091 CDS gi|481785095|gb|ARAV01000003.1| 3855 3733 -3 - 123 hypothetical protein - none -
fig|6666666.65904.peg.2092 CDS gi|481785095|gb|ARAV01000003.1| 3941 4288 2 + 348 hypothetical protein - none -
fig|6666666.65904.peg.2093 CDS gi|481785095|gb|ARAV01000003.1| 4769 4383 -2 - 387 Endoribonuclease L-PSP CBSS-176299.4.peg.1996A
fig|6666666.65904.peg.2094 CDS gi|481785095|gb|ARAV01000003.1| 5403 4792 -3 - 612 FMN-dependent NADH-azoreductase - none -
fig|6666666.65904.peg.2095 CDS gi|481785095|gb|ARAV01000003.1| 5499 6158 3 + 660 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.2096 CDS gi|481785095|gb|ARAV01000003.1| 6675 6127 -3 - 549 hypothetical protein - none -
fig|6666666.65904.peg.2097 CDS gi|481785095|gb|ARAV01000003.1| 7753 7043 -1 - 711 hypothetical protein - none -
fig|6666666.65904.peg.2098 CDS gi|481785095|gb|ARAV01000003.1| 7847 8275 2 + 429 hypothetical protein - none -
fig|6666666.65904.peg.2099 CDS gi|481785095|gb|ARAV01000003.1| 8355 9278 3 + 924 ABC transporter, ATP-binding protein - none -
fig|6666666.65904.peg.2100 CDS gi|481785095|gb|ARAV01000003.1| 9275 10069 2 + 795 ABC transporter membrane protein - none -
fig|6666666.65904.peg.2101 CDS gi|481785095|gb|ARAV01000003.1| 10605 10066 -3 - 540 hypothetical protein - none -
fig|6666666.65904.peg.2102 CDS gi|481785095|gb|ARAV01000003.1| 11360 10635 -2 - 726 Putative stomatin/prohibitin-family membrane protease subunit PA4582 - none -
fig|6666666.65904.peg.2103 CDS gi|481785095|gb|ARAV01000003.1| 11837 12892 2 + 1056 putative transcription regulator - none -
fig|6666666.65904.peg.2104 CDS gi|481785095|gb|ARAV01000003.1| 13042 14949 1 + 1908 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - none -
fig|6666666.65904.peg.2105 CDS gi|481785095|gb|ARAV01000003.1| 15034 15615 1 + 582 hypothetical protein - none -
fig|6666666.65904.peg.2106 CDS gi|481785095|gb|ARAV01000003.1| 15667 16302 1 + 636 hypothetical protein - none -
fig|6666666.65904.peg.2107 CDS gi|481785095|gb|ARAV01000003.1| 16401 17153 3 + 753 hypothetical protein - none -
fig|6666666.65904.peg.2108 CDS gi|481785095|gb|ARAV01000003.1| 18155 17463 -2 - 693 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65904.peg.2109 CDS gi|481785095|gb|ARAV01000003.1| 19383 18172 -3 - 1212 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.65904.peg.2110 CDS gi|481785095|gb|ARAV01000003.1| 21165 19468 -3 - 1698 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65904.peg.2111 CDS gi|481785095|gb|ARAV01000003.1| 21763 21362 -1 - 402 hypothetical protein - none -
fig|6666666.65904.peg.2112 CDS gi|481785095|gb|ARAV01000003.1| 21953 23035 2 + 1083 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.65904.peg.2113 CDS gi|481785095|gb|ARAV01000003.1| 23480 24991 2 + 1512 putative ABC transporter permease protein - none -
fig|6666666.65904.peg.2114 CDS gi|481785095|gb|ARAV01000003.1| 25089 26600 3 + 1512 hypothetical protein - none -
fig|6666666.65904.peg.2115 CDS gi|481785095|gb|ARAV01000003.1| 26981 26859 -2 - 123 hypothetical protein - none -
fig|6666666.65904.peg.2116 CDS gi|481785095|gb|ARAV01000003.1| 26980 28338 1 + 1359 Glucuronide transporter UidB - none -
fig|6666666.65904.peg.2117 CDS gi|481785095|gb|ARAV01000003.1| 29356 28511 -1 - 846 hypothetical protein - none -
fig|6666666.65904.peg.2118 CDS gi|481785095|gb|ARAV01000003.1| 30519 29356 -3 - 1164 Gluconokinase (EC 2.7.1.12) / oxidoreductase domain D-gluconate and ketogluconates metabolism
fig|6666666.65904.peg.2119 CDS gi|481785095|gb|ARAV01000003.1| 31554 30544 -3 - 1011 hypothetical protein - none -
fig|6666666.65904.peg.2120 CDS gi|481785095|gb|ARAV01000003.1| 32410 31568 -1 - 843 FIG00547853: hypothetical protein - none -
fig|6666666.65904.peg.2121 CDS gi|481785095|gb|ARAV01000003.1| 32669 33661 2 + 993 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.65904.peg.2122 CDS gi|481785095|gb|ARAV01000003.1| 33661 33912 1 + 252 FIG00545382: hypothetical protein - none -
fig|6666666.65904.peg.2123 CDS gi|481785095|gb|ARAV01000003.1| 34407 33919 -3 - 489 hypothetical protein - none -
fig|6666666.65904.peg.2124 CDS gi|481785095|gb|ARAV01000003.1| 34628 34404 -2 - 225 FIG00548796: hypothetical protein - none -
fig|6666666.65904.peg.2125 CDS gi|481785095|gb|ARAV01000003.1| 35612 34761 -2 - 852 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65904.peg.2126 CDS gi|481785095|gb|ARAV01000003.1| 36421 35612 -1 - 810 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.65904.peg.2127 CDS gi|481785095|gb|ARAV01000003.1| 36688 38073 1 + 1386 Tyrosine-protein kinase Wzc (EC 2.7.10.2) Capsular Polysaccharides Biosynthesis and Assembly
fig|6666666.65904.peg.2128 CDS gi|481785095|gb|ARAV01000003.1| 38210 38668 2 + 459 Low molecular weight protein-tyrosine-phosphatase Wzb (EC 3.1.3.48) Capsular Polysaccharides Biosynthesis and Assembly
fig|6666666.65904.peg.2129 CDS gi|481785095|gb|ARAV01000003.1| 39109 39321 1 + 213 hypothetical protein - none -
fig|6666666.65904.peg.2130 CDS gi|481785095|gb|ARAV01000003.1| 39570 39349 -3 - 222 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) - none -
fig|6666666.65904.peg.2131 CDS gi|481785095|gb|ARAV01000003.1| 40020 41345 3 + 1326 Large subunit naph/bph dioxygenase - none -
fig|6666666.65904.peg.2132 CDS gi|481785095|gb|ARAV01000003.1| 41383 41751 1 + 369 3-phenylpropionate dioxygenase ferredoxin subunit Aromatic dioxygenase mess;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65904.peg.2133 CDS gi|481785095|gb|ARAV01000003.1| 41748 42962 3 + 1215 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.65904.peg.2134 CDS gi|481785095|gb|ARAV01000003.1| 42986 43546 2 + 561 Biphenyl dioxygenase subunit beta (EC 1.14.12.18) (Biphenyl 2,3-dioxygenase) - none -
fig|6666666.65904.peg.2135 CDS gi|481785095|gb|ARAV01000003.1| 43555 44373 1 + 819 Dihydrodiol dehydrogenase (EC 1.3.1.56) - none -
fig|6666666.65904.peg.2136 CDS gi|481785095|gb|ARAV01000003.1| 44370 45998 3 + 1629 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65904.peg.2137 CDS gi|481785095|gb|ARAV01000003.1| 46076 46327 2 + 252 hypothetical protein - none -
fig|6666666.65904.peg.2138 CDS gi|481785095|gb|ARAV01000003.1| 46324 46743 1 + 420 hypothetical protein - none -
fig|6666666.65904.peg.2139 CDS gi|481785095|gb|ARAV01000003.1| 48730 47354 -1 - 1377 metabolite transporter, MFS superfamily - none -
fig|6666666.65904.peg.2140 CDS gi|481785095|gb|ARAV01000003.1| 49005 50747 3 + 1743 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) - none -
fig|6666666.65904.peg.2141 CDS gi|481785095|gb|ARAV01000003.1| 51700 50819 -1 - 882 TesB-like acyl-CoA thioesterase 5 Acyl-CoA thioesterase II
fig|6666666.65904.peg.2142 CDS gi|481785095|gb|ARAV01000003.1| 52684 51830 -1 - 855 hypothetical protein - none -
fig|6666666.65904.peg.2143 CDS gi|481785095|gb|ARAV01000003.1| 52762 53592 1 + 831 Transcriptional regulator, IclR family - none -
fig|6666666.65904.peg.2144 CDS gi|481785095|gb|ARAV01000003.1| 54666 53644 -3 - 1023 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-) - none -
fig|6666666.65904.peg.2145 CDS gi|481785095|gb|ARAV01000003.1| 55607 54687 -2 - 921 Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol - none -
fig|6666666.65904.peg.2146 CDS gi|481785095|gb|ARAV01000003.1| 56458 55658 -1 - 801 4-oxalocrotonate decarboxylase (EC 4.1.1.77) - none -
fig|6666666.65904.peg.2147 CDS gi|481785095|gb|ARAV01000003.1| 57411 56476 -3 - 936 3-carboxyethylcatechol 2,3-dioxygenase (EC 1.13.11.16) Aromatic dioxygenase mess;
Dioxygenases (EC 1.13.11.-)
fig|6666666.65904.peg.2148 CDS gi|481785095|gb|ARAV01000003.1| 57998 57546 -2 - 453 hypothetical protein - none -
fig|6666666.65904.peg.2149 CDS gi|481785095|gb|ARAV01000003.1| 58787 58011 -2 - 777 Hydrolase (HAD superfamily) - none -
fig|6666666.65904.peg.2150 CDS gi|481785095|gb|ARAV01000003.1| 60407 58809 -2 - 1599 hypothetical protein - none -
fig|6666666.65904.peg.2151 CDS gi|481785095|gb|ARAV01000003.1| 60475 61737 1 + 1263 FIG00544673: hypothetical protein - none -
fig|6666666.65904.peg.2152 CDS gi|481785095|gb|ARAV01000003.1| 61822 62643 1 + 822 Membrane protein, putative - none -
fig|6666666.65904.peg.2153 CDS gi|481785095|gb|ARAV01000003.1| 62715 63662 3 + 948 Cell division inhibitor Persister Cells
fig|6666666.65904.peg.2154 CDS gi|481785095|gb|ARAV01000003.1| 65176 63818 -1 - 1359 vannilate transporter VanK - none -
fig|6666666.65904.peg.2155 CDS gi|481785095|gb|ARAV01000003.1| 66170 65187 -2 - 984 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) Anaerobic respiratory reductases;
Anaerobic respiratory reductases
fig|6666666.65904.peg.2156 CDS gi|481785095|gb|ARAV01000003.1| 67292 66174 -2 - 1119 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) - none -
fig|6666666.65904.peg.2157 CDS gi|481785095|gb|ARAV01000003.1| 67501 68073 1 + 573 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65904.peg.2158 CDS gi|481785095|gb|ARAV01000003.1| 68195 68635 2 + 441 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65904.peg.2159 CDS gi|481785095|gb|ARAV01000003.1| 69313 68648 -1 - 666 Circadian phase modifier - none -
fig|6666666.65904.peg.2160 CDS gi|481785095|gb|ARAV01000003.1| 69743 70084 2 + 342 hypothetical protein - none -
fig|6666666.65904.peg.2161 CDS gi|481785095|gb|ARAV01000003.1| 70969 70085 -1 - 885 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65904.peg.2162 CDS gi|481785095|gb|ARAV01000003.1| 71168 73300 2 + 2133 Beta-glucosidase (EC 3.2.1.21) Beta-Glucoside Metabolism
fig|6666666.65904.peg.2163 CDS gi|481785095|gb|ARAV01000003.1| 73937 73377 -2 - 561 hypothetical protein - none -
fig|6666666.65904.peg.2164 CDS gi|481785095|gb|ARAV01000003.1| 75389 74064 -2 - 1326 Predicted D-mannonate epimerase - none -
fig|6666666.65904.peg.2165 CDS gi|481785095|gb|ARAV01000003.1| 76082 75477 -2 - 606 hypothetical protein - none -
fig|6666666.65904.peg.2166 CDS gi|481785095|gb|ARAV01000003.1| 76709 76125 -2 - 585 hypothetical protein - none -
fig|6666666.65904.peg.2167 CDS gi|481785095|gb|ARAV01000003.1| 77748 76738 -3 - 1011 Bacterial luciferase family protein (Alkanal monooxygenase, FMN- linked) (EC 1.14.14.3) - none -
fig|6666666.65904.peg.2168 CDS gi|481785095|gb|ARAV01000003.1| 77834 78214 2 + 381 transcriptional regulator, MerR family - none -
fig|6666666.65904.peg.2169 CDS gi|481785095|gb|ARAV01000003.1| 79434 78211 -3 - 1224 hypothetical protein - none -
fig|6666666.65904.peg.2170 CDS gi|481785095|gb|ARAV01000003.1| 79646 79954 2 + 309 hypothetical protein - none -
fig|6666666.65904.peg.2171 CDS gi|481785095|gb|ARAV01000003.1| 80615 79938 -2 - 678 Mobile element protein - none -
fig|6666666.65904.peg.2172 CDS gi|481785095|gb|ARAV01000003.1| 81412 81167 -1 - 246 hypothetical protein - none -
fig|6666666.65904.peg.2173 CDS gi|481785095|gb|ARAV01000003.1| 81608 81727 2 + 120 hypothetical protein - none -
fig|6666666.65904.peg.2174 CDS gi|481785095|gb|ARAV01000003.1| 82363 81755 -1 - 609 hypothetical protein - none -
fig|6666666.65904.peg.2175 CDS gi|481785095|gb|ARAV01000003.1| 82386 82958 3 + 573 Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter - none -
fig|6666666.65904.peg.2176 CDS gi|481785095|gb|ARAV01000003.1| 83495 84046 2 + 552 Mobile element protein - none -
fig|6666666.65904.peg.2177 CDS gi|481785095|gb|ARAV01000003.1| 84104 84571 2 + 468 hypothetical protein - none -
fig|6666666.65904.peg.2178 CDS gi|481785095|gb|ARAV01000003.1| 84709 85506 1 + 798 Putative carbamoylphosphate synthase large subunit, short form - none -
fig|6666666.65904.peg.2179 CDS gi|481785095|gb|ARAV01000003.1| 85487 87151 2 + 1665 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65904.peg.2180 CDS gi|481785095|gb|ARAV01000003.1| 87754 87158 -1 - 597 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.2181 CDS gi|481785095|gb|ARAV01000003.1| 87840 88994 3 + 1155 Neopullulanase (EC 3.2.1.135) Maltose and Maltodextrin Utilization
fig|6666666.65904.peg.2182 CDS gi|481785095|gb|ARAV01000003.1| 89506 88991 -1 - 516 hypothetical protein - none -
fig|6666666.65904.peg.2183 CDS gi|481785095|gb|ARAV01000003.1| 90953 89526 -2 - 1428 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65904.peg.2184 CDS gi|481785095|gb|ARAV01000003.1| 91035 91793 3 + 759 short chain dehydrogenase - none -
fig|6666666.65904.peg.2185 CDS gi|481785095|gb|ARAV01000003.1| 91818 92693 3 + 876 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.65904.peg.2186 CDS gi|481785095|gb|ARAV01000003.1| 92730 94280 3 + 1551 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.65904.peg.2187 CDS gi|481785095|gb|ARAV01000003.1| 94830 94288 -3 - 543 FIG00543933: hypothetical protein - none -
fig|6666666.65904.peg.2188 CDS gi|481785095|gb|ARAV01000003.1| 95025 96938 3 + 1914 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65904.peg.2189 CDS gi|481785095|gb|ARAV01000003.1| 97693 97019 -1 - 675 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.2190 CDS gi|481785095|gb|ARAV01000003.1| 98715 97690 -3 - 1026 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.2191 CDS gi|481785095|gb|ARAV01000003.1| 99547 98723 -1 - 825 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.2192 CDS gi|481785095|gb|ARAV01000003.1| 99877 100533 1 + 657 TesB-like acyl-CoA thioesterase 5 Acyl-CoA thioesterase II
fig|6666666.65904.peg.2193 CDS gi|481785095|gb|ARAV01000003.1| 101590 100538 -1 - 1053 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.2194 CDS gi|481785095|gb|ARAV01000003.1| 101805 104033 3 + 2229 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) Anaerobic respiratory reductases;
Anaerobic respiratory reductases
fig|6666666.65904.peg.2195 CDS gi|481785095|gb|ARAV01000003.1| 104073 104891 3 + 819 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65904.peg.2196 CDS gi|481785095|gb|ARAV01000003.1| 104933 106087 2 + 1155 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65904.peg.2197 CDS gi|481785095|gb|ARAV01000003.1| 106673 106119 -2 - 555 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.2198 CDS gi|481785095|gb|ARAV01000003.1| 107277 106711 -3 - 567 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65904.peg.2199 CDS gi|481785095|gb|ARAV01000003.1| 107321 107749 2 + 429 Glyoxalase family protein - none -
fig|6666666.65904.peg.2200 CDS gi|481785095|gb|ARAV01000003.1| 108037 110445 1 + 2409 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) Anaerobic respiratory reductases;
Anaerobic respiratory reductases
fig|6666666.65904.peg.2201 CDS gi|481785095|gb|ARAV01000003.1| 110464 110691 1 + 228 hypothetical protein - none -
fig|6666666.65904.peg.2202 CDS gi|481785095|gb|ARAV01000003.1| 110708 111268 2 + 561 hypothetical protein - none -
fig|6666666.65904.peg.2203 CDS gi|481785095|gb|ARAV01000003.1| 112599 111280 -3 - 1320 FIG016551: Putative peptidase - none -
fig|6666666.65904.peg.2204 CDS gi|481785095|gb|ARAV01000003.1| 113287 112622 -1 - 666 hypothetical protein - none -
fig|6666666.65904.peg.2205 CDS gi|481785095|gb|ARAV01000003.1| 114551 113514 -2 - 1038 Conserved protein - none -
fig|6666666.65904.peg.2206 CDS gi|481785095|gb|ARAV01000003.1| 115527 114613 -3 - 915 Putative lipase - none -
fig|6666666.65904.peg.2207 CDS gi|481785095|gb|ARAV01000003.1| 115567 116979 1 + 1413 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.65904.peg.2208 CDS gi|481785095|gb|ARAV01000003.1| 116979 117911 3 + 933 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65904.peg.2209 CDS gi|481785095|gb|ARAV01000003.1| 117997 118554 1 + 558 hypothetical protein - none -
fig|6666666.65904.peg.2210 CDS gi|481785095|gb|ARAV01000003.1| 118548 119063 3 + 516 hypothetical protein - none -
fig|6666666.65904.peg.2211 CDS gi|481785095|gb|ARAV01000003.1| 119086 119673 1 + 588 hypothetical protein - none -
fig|6666666.65904.peg.2212 CDS gi|481785095|gb|ARAV01000003.1| 119657 120181 2 + 525 carbonic anhydrase, family 3 - none -
fig|6666666.65904.peg.2213 CDS gi|481785095|gb|ARAV01000003.1| 121219 120137 -1 - 1083 FIG00544490: hypothetical protein - none -
fig|6666666.65904.peg.2214 CDS gi|481785095|gb|ARAV01000003.1| 122536 121283 -1 - 1254 permease of the major facilitator superfamily - none -
fig|6666666.65904.peg.2215 CDS gi|481785095|gb|ARAV01000003.1| 123306 122548 -3 - 759 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65904.peg.2216 CDS gi|481785095|gb|ARAV01000003.1| 123352 123966 1 + 615 Lysine decarboxylase family - none -
fig|6666666.65904.peg.2217 CDS gi|481785095|gb|ARAV01000003.1| 123989 125689 2 + 1701 FIG00544558: hypothetical protein - none -
fig|6666666.65904.peg.2218 CDS gi|481785095|gb|ARAV01000003.1| 126684 125686 -3 - 999 FIG00545643: hypothetical protein - none -
fig|6666666.65904.peg.2219 CDS gi|481785095|gb|ARAV01000003.1| 126811 127080 1 + 270 hypothetical protein - none -
fig|6666666.65904.peg.2220 CDS gi|481785095|gb|ARAV01000003.1| 127077 127826 3 + 750 FIG00545045: hypothetical protein - none -
fig|6666666.65904.peg.2221 CDS gi|481785095|gb|ARAV01000003.1| 127913 128212 2 + 300 hypothetical protein - none -
fig|6666666.65904.peg.2222 CDS gi|481785095|gb|ARAV01000003.1| 130491 128221 -3 - 2271 ATP-dependent helicase HrpB - none -
fig|6666666.65904.peg.2223 CDS gi|481785095|gb|ARAV01000003.1| 130561 130920 1 + 360 Transcriptional regulator ArsR family - none -
fig|6666666.65904.peg.2224 CDS gi|481785095|gb|ARAV01000003.1| 130917 132824 3 + 1908 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65904.peg.2225 CDS gi|481785095|gb|ARAV01000003.1| 132874 133239 1 + 366 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.65904.peg.2226 CDS gi|481785095|gb|ARAV01000003.1| 133236 133550 3 + 315 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.65904.peg.2227 CDS gi|481785095|gb|ARAV01000003.1| 133894 133547 -1 - 348 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.65904.peg.2228 CDS gi|481785095|gb|ARAV01000003.1| 133985 135082 2 + 1098 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65904.peg.2229 CDS gi|481785095|gb|ARAV01000003.1| 135075 135494 3 + 420 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65904.peg.2230 CDS gi|481785095|gb|ARAV01000003.1| 136740 135478 -3 - 1263 putative amidase - none -
fig|6666666.65904.peg.2231 CDS gi|481785095|gb|ARAV01000003.1| 137342 136737 -2 - 606 putative maltose O-acetyltransferase - none -
fig|6666666.65904.peg.2232 CDS gi|481785095|gb|ARAV01000003.1| 137461 138219 1 + 759 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.2233 CDS gi|481785095|gb|ARAV01000003.1| 138372 139082 3 + 711 putative oxidoreductase - none -
fig|6666666.65904.peg.2234 CDS gi|481785095|gb|ARAV01000003.1| 140628 139153 -3 - 1476 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65904.peg.2235 CDS gi|481785095|gb|ARAV01000003.1| 140825 140631 -2 - 195 hypothetical protein - none -
fig|6666666.65904.peg.2236 CDS gi|481785095|gb|ARAV01000003.1| 141083 141733 2 + 651 Threonine efflux protein - none -
fig|6666666.65904.peg.2237 CDS gi|481785095|gb|ARAV01000003.1| 141773 142054 2 + 282 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65904.peg.2238 CDS gi|481785095|gb|ARAV01000003.1| 142058 142846 2 + 789 lactoylglutathione lyase-like protein - none -
fig|6666666.65904.peg.2239 CDS gi|481785095|gb|ARAV01000003.1| 142858 143145 1 + 288 hypothetical protein - none -
fig|6666666.65904.peg.2240 CDS gi|481785095|gb|ARAV01000003.1| 143261 144124 2 + 864 hypothetical protein - none -
fig|6666666.65904.peg.2241 CDS gi|481785095|gb|ARAV01000003.1| 145060 144131 -1 - 930 FIG00544069: hypothetical protein - none -
fig|6666666.65904.peg.2242 CDS gi|481785095|gb|ARAV01000003.1| 145128 145754 3 + 627 No significant database matches - none -
fig|6666666.65904.peg.2243 CDS gi|481785095|gb|ARAV01000003.1| 147698 145767 -2 - 1932 putative endopeptidase - none -
fig|6666666.65904.peg.2244 CDS gi|481785095|gb|ARAV01000003.1| 147776 148453 2 + 678 hypothetical protein - none -
fig|6666666.65904.peg.2245 CDS gi|481785095|gb|ARAV01000003.1| 148437 149345 3 + 909 putative integral membrane protein - none -
fig|6666666.65904.peg.2246 CDS gi|481785095|gb|ARAV01000003.1| 149494 154032 1 + 4539 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65904.peg.2247 CDS gi|481785095|gb|ARAV01000003.1| 154032 155573 3 + 1542 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65904.peg.2248 CDS gi|481785095|gb|ARAV01000003.1| 156405 155656 -3 - 750 Nitrate ABC transporter, ATP-binding protein Nitrate and nitrite ammonification
fig|6666666.65904.peg.2249 CDS gi|481785095|gb|ARAV01000003.1| 157186 156398 -1 - 789 Nitrate ABC transporter, permease protein Nitrate and nitrite ammonification
fig|6666666.65904.peg.2250 CDS gi|481785095|gb|ARAV01000003.1| 158354 157206 -2 - 1149 putative cyanate ABC transporter, substrate binding protein - none -
fig|6666666.65904.peg.2251 CDS gi|481785095|gb|ARAV01000003.1| 158587 160215 1 + 1629 Flavoprotein - none -
fig|6666666.65904.peg.2252 CDS gi|481785095|gb|ARAV01000003.1| 160215 161144 3 + 930 Diacylglycerol kinase-related protein - none -
fig|6666666.65904.peg.2253 CDS gi|481785095|gb|ARAV01000003.1| 161141 161728 2 + 588 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.2254 CDS gi|481785095|gb|ARAV01000003.1| 161725 163287 1 + 1563 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.65904.peg.2255 CDS gi|481785095|gb|ARAV01000003.1| 163480 163316 -1 - 165 hypothetical protein - none -
fig|6666666.65904.peg.2256 CDS gi|481785095|gb|ARAV01000003.1| 167065 163616 -1 - 3450 putative arabinosyltransferase - none -
fig|6666666.65904.peg.2257 CDS gi|481785095|gb|ARAV01000003.1| 168987 167086 -3 - 1902 putative membrane protein - none -
fig|6666666.65904.peg.2258 CDS gi|481785095|gb|ARAV01000003.1| 169049 169195 2 + 147 hypothetical protein - none -
fig|6666666.65904.peg.2259 CDS gi|481785095|gb|ARAV01000003.1| 169918 169151 -1 - 768 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.65904.peg.2260 CDS gi|481785095|gb|ARAV01000003.1| 171356 169932 -2 - 1425 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65904.peg.2261 CDS gi|481785095|gb|ARAV01000003.1| 171721 171485 -1 - 237 FIG00543901: hypothetical protein - none -
fig|6666666.65904.peg.2262 CDS gi|481785095|gb|ARAV01000003.1| 171809 172294 2 + 486 Putative membrane protein - none -
fig|6666666.65904.peg.2263 CDS gi|481785095|gb|ARAV01000003.1| 172291 172740 1 + 450 hypothetical protein - none -
fig|6666666.65904.peg.2264 CDS gi|481785095|gb|ARAV01000003.1| 172789 173742 1 + 954 hypothetical protein - none -
fig|6666666.65904.peg.2265 CDS gi|481785095|gb|ARAV01000003.1| 173764 174246 1 + 483 FIG00544442: hypothetical protein - none -
fig|6666666.65904.peg.2266 CDS gi|481785095|gb|ARAV01000003.1| 174258 174740 3 + 483 hypothetical protein - none -
fig|6666666.65904.peg.2267 CDS gi|481785095|gb|ARAV01000003.1| 175648 174737 -1 - 912 Putative glycosyl transferase - none -
fig|6666666.65904.peg.2268 CDS gi|481785095|gb|ARAV01000003.1| 176504 175692 -2 - 813 O-antigen export system, ATP-binding protein - none -
fig|6666666.65904.peg.2269 CDS gi|481785095|gb|ARAV01000003.1| 177422 176535 -2 - 888 O-antigen export system permease protein RfbD - none -
fig|6666666.65904.peg.2270 CDS gi|481785095|gb|ARAV01000003.1| 177741 178985 3 + 1245 selenocysteine lyase - none -
fig|6666666.65904.peg.2271 CDS gi|481785095|gb|ARAV01000003.1| 180491 178995 -2 - 1497 FIG00546699: hypothetical protein - none -
fig|6666666.65904.peg.2272 CDS gi|481785095|gb|ARAV01000003.1| 181498 180542 -1 - 957 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65904.peg.2273 CDS gi|481785095|gb|ARAV01000003.1| 181832 183079 2 + 1248 Integrase - none -
fig|6666666.65904.peg.2274 CDS gi|481785095|gb|ARAV01000003.1| 183978 184166 3 + 189 hypothetical protein - none -
fig|6666666.65904.peg.2275 CDS gi|481785095|gb|ARAV01000003.1| 184753 186111 1 + 1359 DNA primase, phage associated - none -
fig|6666666.65904.peg.2276 CDS gi|481785095|gb|ARAV01000003.1| 186863 186985 2 + 123 hypothetical protein - none -
fig|6666666.65904.peg.2277 CDS gi|481785095|gb|ARAV01000003.1| 188285 188881 2 + 597 Adenine-specific DNA methyltransferase - none -
fig|6666666.65904.peg.2278 CDS gi|481785095|gb|ARAV01000003.1| 189431 190417 2 + 987 Ferrous iron transport permease EfeU Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65904.peg.2279 CDS gi|481785095|gb|ARAV01000003.1| 190414 191676 1 + 1263 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65904.peg.2280 CDS gi|481785095|gb|ARAV01000003.1| 191681 192985 2 + 1305 Ferrous iron transport peroxidase EfeB Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65904.peg.2281 CDS gi|481785095|gb|ARAV01000003.1| 194745 193384 -3 - 1362 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65904.peg.2282 CDS gi|481785095|gb|ARAV01000003.1| 196109 195045 -2 - 1065 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65904.peg.2283 CDS gi|481785095|gb|ARAV01000003.1| 196573 196109 -1 - 465 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65904.peg.2284 CDS gi|481785095|gb|ARAV01000003.1| 197039 196563 -2 - 477 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65904.peg.2285 CDS gi|481785095|gb|ARAV01000003.1| 198240 197056 -3 - 1185 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65904.peg.2286 CDS gi|481785095|gb|ARAV01000003.1| 198312 198569 3 + 258 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65904.peg.2287 CDS gi|481785095|gb|ARAV01000003.1| 199588 198566 -1 - 1023 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65904.peg.2288 CDS gi|481785095|gb|ARAV01000003.1| 200081 201124 2 + 1044 hypothetical protein - none -
fig|6666666.65904.peg.2289 CDS gi|481785095|gb|ARAV01000003.1| 201595 201125 -1 - 471 transcriptional regulator - none -
fig|6666666.65904.peg.2290 CDS gi|481785095|gb|ARAV01000003.1| 202299 201889 -3 - 411 putative membrane protein - none -
fig|6666666.65904.peg.2291 CDS gi|481785095|gb|ARAV01000003.1| 202332 203708 3 + 1377 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65904.peg.2292 CDS gi|481785095|gb|ARAV01000003.1| 203781 204590 3 + 810 Putative hydroxylase - none -
fig|6666666.65904.peg.2293 CDS gi|481785095|gb|ARAV01000003.1| 204845 206434 2 + 1590 di- and tricarboxylate transporter - none -
fig|6666666.65904.peg.2294 CDS gi|481785095|gb|ARAV01000003.1| 207632 206748 -2 - 885 Mobile element protein - none -
fig|6666666.65904.peg.2295 CDS gi|481785095|gb|ARAV01000003.1| 208097 209200 2 + 1104 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - none -
fig|6666666.65904.peg.2296 CDS gi|481785095|gb|ARAV01000003.1| 210170 209208 -2 - 963 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65904.peg.2297 CDS gi|481785095|gb|ARAV01000003.1| 210276 210764 3 + 489 FIG00544249: hypothetical protein - none -
fig|6666666.65904.peg.2298 CDS gi|481785095|gb|ARAV01000003.1| 210764 211237 2 + 474 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) - none -
fig|6666666.65904.peg.2299 CDS gi|481785095|gb|ARAV01000003.1| 211341 211550 3 + 210 FIG00546156: hypothetical protein - none -
fig|6666666.65904.peg.2300 CDS gi|481785095|gb|ARAV01000003.1| 211799 214246 2 + 2448 putative membrane protein - none -
fig|6666666.65904.peg.2301 CDS gi|481785095|gb|ARAV01000003.1| 214266 215537 3 + 1272 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65904.peg.2302 CDS gi|481785095|gb|ARAV01000003.1| 215603 216439 2 + 837 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65904.peg.2303 CDS gi|481785095|gb|ARAV01000003.1| 217692 216736 -3 - 957 FIG00544944: hypothetical protein - none -
fig|6666666.65904.peg.2304 CDS gi|481785095|gb|ARAV01000003.1| 218448 219722 3 + 1275 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65904.peg.2305 CDS gi|481785095|gb|ARAV01000003.1| 219722 220288 2 + 567 No significant database matches - none -
fig|6666666.65904.peg.2306 CDS gi|481785095|gb|ARAV01000003.1| 220318 222633 1 + 2316 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65904.peg.2307 CDS gi|481785095|gb|ARAV01000003.1| 222725 223054 2 + 330 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65904.peg.2308 CDS gi|481785095|gb|ARAV01000003.1| 223119 223745 3 + 627 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65904.peg.2309 CDS gi|481785095|gb|ARAV01000003.1| 224774 224601 -2 - 174 Mobile element protein - none -
fig|6666666.65904.peg.2310 CDS gi|481785099|gb|ARAV01000002.1| 22 195 1 + 174 Mobile element protein - none -
fig|6666666.65904.peg.2311 CDS gi|481785099|gb|ARAV01000002.1| 790 653 -1 - 138 hypothetical protein - none -
fig|6666666.65904.peg.2312 CDS gi|481785099|gb|ARAV01000002.1| 1723 2637 1 + 915 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.65904.peg.2313 CDS gi|481785099|gb|ARAV01000002.1| 3081 2638 -3 - 444 cis-3-chloroacrylic acid dehalogenase - none -
fig|6666666.65904.peg.2314 CDS gi|481785099|gb|ARAV01000002.1| 3269 3913 2 + 645 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65904.peg.2315 CDS gi|481785099|gb|ARAV01000002.1| 4077 4643 3 + 567 putative membrane protein - none -
fig|6666666.65904.peg.2316 CDS gi|481785099|gb|ARAV01000002.1| 4689 6104 3 + 1416 hypothetical protein - none -
fig|6666666.65904.peg.2317 CDS gi|481785099|gb|ARAV01000002.1| 6166 7536 1 + 1371 hypothetical protein - none -
fig|6666666.65904.peg.2318 CDS gi|481785099|gb|ARAV01000002.1| 8036 7545 -2 - 492 hypothetical protein - none -
fig|6666666.65904.peg.2319 CDS gi|481785099|gb|ARAV01000002.1| 8892 8161 -3 - 732 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65904.peg.2320 CDS gi|481785099|gb|ARAV01000002.1| 9801 9655 -3 - 147 hypothetical protein - none -
fig|6666666.65904.peg.2321 CDS gi|481785099|gb|ARAV01000002.1| 10227 10523 3 + 297 hypothetical protein - none -
fig|6666666.65904.peg.2322 CDS gi|481785099|gb|ARAV01000002.1| 10548 11555 3 + 1008 hypothetical protein - none -
fig|6666666.65904.peg.2323 CDS gi|481785099|gb|ARAV01000002.1| 11792 12607 2 + 816 Alcohol dehydrogenase GroES domain protein - none -
fig|6666666.65904.peg.2324 CDS gi|481785099|gb|ARAV01000002.1| 13112 12615 -2 - 498 Transcriptional regulator - none -
fig|6666666.65904.peg.2325 CDS gi|481785099|gb|ARAV01000002.1| 13211 13639 2 + 429 ABC transporter, permease protein - none -
fig|6666666.65904.peg.2326 CDS gi|481785099|gb|ARAV01000002.1| 13640 14728 2 + 1089 ABC transporter, permease protein - none -
fig|6666666.65904.peg.2327 CDS gi|481785099|gb|ARAV01000002.1| 14798 15529 2 + 732 ABC transporter, permease protein - none -
fig|6666666.65904.peg.2328 CDS gi|481785099|gb|ARAV01000002.1| 15531 16286 3 + 756 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.65904.peg.2329 CDS gi|481785099|gb|ARAV01000002.1| 16429 16827 1 + 399 hypothetical protein - none -
fig|6666666.65904.peg.2330 CDS gi|481785099|gb|ARAV01000002.1| 16824 16997 3 + 174 hypothetical protein - none -
fig|6666666.65904.peg.2331 CDS gi|481785099|gb|ARAV01000002.1| 19011 17416 -3 - 1596 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65904.peg.2332 CDS gi|481785099|gb|ARAV01000002.1| 19105 20160 1 + 1056 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65904.peg.2333 CDS gi|481785099|gb|ARAV01000002.1| 20750 20169 -2 - 582 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.65904.peg.2334 CDS gi|481785099|gb|ARAV01000002.1| 21528 20737 -3 - 792 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65904.peg.2335 CDS gi|481785099|gb|ARAV01000002.1| 22152 21583 -3 - 570 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65904.peg.2336 CDS gi|481785099|gb|ARAV01000002.1| 24002 22152 -2 - 1851 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65904.peg.2337 CDS gi|481785099|gb|ARAV01000002.1| 25521 24043 -3 - 1479 FIG00545237: hypothetical protein - none -
fig|6666666.65904.peg.2338 CDS gi|481785099|gb|ARAV01000002.1| 26632 25616 -1 - 1017 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65904.peg.2339 CDS gi|481785099|gb|ARAV01000002.1| 29173 26885 -1 - 2289 Carbon starvation protein A Carbon Starvation
fig|6666666.65904.peg.2340 CDS gi|481785099|gb|ARAV01000002.1| 30934 29351 -1 - 1584 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65904.peg.2341 CDS gi|481785099|gb|ARAV01000002.1| 31754 31017 -2 - 738 FIG00545237: hypothetical protein - none -
fig|6666666.65904.peg.2342 CDS gi|481785099|gb|ARAV01000002.1| 33714 31873 -3 - 1842 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.65904.peg.2343 CDS gi|481785099|gb|ARAV01000002.1| 34691 33777 -2 - 915 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65904.peg.2344 CDS gi|481785099|gb|ARAV01000002.1| 35816 34800 -2 - 1017 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65904.peg.2345 CDS gi|481785099|gb|ARAV01000002.1| 36450 35941 -3 - 510 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65904.peg.2346 CDS gi|481785099|gb|ARAV01000002.1| 38322 36454 -3 - 1869 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65904.peg.2347 CDS gi|481785099|gb|ARAV01000002.1| 38607 40409 3 + 1803 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65904.peg.2348 CDS gi|481785099|gb|ARAV01000002.1| 40411 41019 1 + 609 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65904.peg.2349 CDS gi|481785099|gb|ARAV01000002.1| 41021 42862 2 + 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65904.peg.2350 CDS gi|481785099|gb|ARAV01000002.1| 42873 44279 3 + 1407 FIG00546232: hypothetical protein - none -
fig|6666666.65904.peg.2351 CDS gi|481785099|gb|ARAV01000002.1| 45254 46327 2 + 1074 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.65904.peg.2352 CDS gi|481785099|gb|ARAV01000002.1| 47156 46299 -2 - 858 lysine export regulator protein - none -
fig|6666666.65904.peg.2353 CDS gi|481785099|gb|ARAV01000002.1| 47226 47921 3 + 696 Transporter, LysE family - none -
fig|6666666.65904.peg.2354 CDS gi|481785099|gb|ARAV01000002.1| 48399 47902 -3 - 498 putative acetyltransferase - none -
fig|6666666.65904.peg.2355 CDS gi|481785099|gb|ARAV01000002.1| 48640 48999 1 + 360 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.2356 CDS gi|481785099|gb|ARAV01000002.1| 50072 48996 -2 - 1077 Putative aldo/keto-reductase family protein - none -
fig|6666666.65904.peg.2357 CDS gi|481785099|gb|ARAV01000002.1| 51352 50096 -1 - 1257 hypothetical protein - none -
fig|6666666.65904.peg.2358 CDS gi|481785099|gb|ARAV01000002.1| 53058 51559 -3 - 1500 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65904.peg.2359 CDS gi|481785099|gb|ARAV01000002.1| 54018 53080 -3 - 939 Sodium-dependent transporter - none -
fig|6666666.65904.peg.2360 CDS gi|481785099|gb|ARAV01000002.1| 54257 55006 2 + 750 hypothetical protein - none -
fig|6666666.65904.peg.2361 CDS gi|481785099|gb|ARAV01000002.1| 56034 55003 -3 - 1032 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.2362 CDS gi|481785099|gb|ARAV01000002.1| 57316 56045 -1 - 1272 permease of the major facilitator superfamily - none -
fig|6666666.65904.peg.2363 CDS gi|481785099|gb|ARAV01000002.1| 59036 57360 -2 - 1677 putative ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.2364 CDS gi|481785099|gb|ARAV01000002.1| 60241 59063 -1 - 1179 hypothetical malic enzyme protein - none -
fig|6666666.65904.peg.2365 CDS gi|481785099|gb|ARAV01000002.1| 61940 60456 -2 - 1485 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65904.peg.2366 CDS gi|481785099|gb|ARAV01000002.1| 62242 61943 -1 - 300 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65904.peg.2367 CDS gi|481785099|gb|ARAV01000002.1| 62372 63037 2 + 666 FIG00544014: hypothetical protein - none -
fig|6666666.65904.peg.2368 CDS gi|481785099|gb|ARAV01000002.1| 65075 63057 -2 - 2019 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65904.peg.2369 CDS gi|481785099|gb|ARAV01000002.1| 65105 65782 2 + 678 FIG00544413: hypothetical protein - none -
fig|6666666.65904.peg.2370 CDS gi|481785099|gb|ARAV01000002.1| 66671 65787 -2 - 885 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.65904.peg.2371 CDS gi|481785099|gb|ARAV01000002.1| 67788 66709 -3 - 1080 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.65904.peg.2372 CDS gi|481785099|gb|ARAV01000002.1| 67814 68623 2 + 810 Spermidine synthase-like protein - none -
fig|6666666.65904.peg.2373 CDS gi|481785099|gb|ARAV01000002.1| 71055 68620 -3 - 2436 hypothetical protein - none -
fig|6666666.65904.peg.2374 CDS gi|481785099|gb|ARAV01000002.1| 72284 71052 -2 - 1233 possible esterase - none -
fig|6666666.65904.peg.2375 CDS gi|481785099|gb|ARAV01000002.1| 72431 72961 2 + 531 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Streptomyces coelicolor putative secreted lipase SCD63A.10c TR:Q9KY65 (EMBL:AL356832) (331 aa) fasta scores: E(): 0.00018, 31.3% id in 214 aa, and Streptomyces coelicolor putative lipase 2SCG18.12c TR:Q9K3H5 (EMBL:AL390188) (289 aa) fasta scores: E(): 0.00064, 28.94% id in 190 aa - none -
fig|6666666.65904.peg.2376 CDS gi|481785099|gb|ARAV01000002.1| 73969 72950 -1 - 1020 Putative hydrolase - none -
fig|6666666.65904.peg.2377 CDS gi|481785099|gb|ARAV01000002.1| 75041 74046 -2 - 996 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65904.peg.2378 CDS gi|481785099|gb|ARAV01000002.1| 76117 75167 -1 - 951 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65904.peg.2379 CDS gi|481785099|gb|ARAV01000002.1| 76946 76152 -2 - 795 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65904.peg.2380 CDS gi|481785099|gb|ARAV01000002.1| 78190 77018 -1 - 1173 SAM-dependent methyltransferase - none -
fig|6666666.65904.peg.2381 CDS gi|481785099|gb|ARAV01000002.1| 79043 78177 -2 - 867 FIG00996530: hypothetical protein - none -
fig|6666666.65904.peg.2382 CDS gi|481785099|gb|ARAV01000002.1| 79957 79103 -1 - 855 ABC transporter, ATP-binding protein - none -
fig|6666666.65904.peg.2383 CDS gi|481785099|gb|ARAV01000002.1| 80022 82148 3 + 2127 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.65904.peg.2384 CDS gi|481785099|gb|ARAV01000002.1| 82293 84500 3 + 2208 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65904.peg.2385 CDS gi|481785099|gb|ARAV01000002.1| 85403 84516 -2 - 888 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65904.peg.2386 CDS gi|481785099|gb|ARAV01000002.1| 85724 85404 -2 - 321 FIG00544011: hypothetical protein - none -
fig|6666666.65904.peg.2387 CDS gi|481785099|gb|ARAV01000002.1| 86762 86070 -2 - 693 FIG00996186: hypothetical protein - none -
fig|6666666.65904.peg.2388 CDS gi|481785099|gb|ARAV01000002.1| 87237 86773 -3 - 465 hypothetical protein - none -
fig|6666666.65904.peg.2389 CDS gi|481785099|gb|ARAV01000002.1| 87857 87489 -2 - 369 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2390 CDS gi|481785099|gb|ARAV01000002.1| 89318 87867 -2 - 1452 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2391 CDS gi|481785099|gb|ARAV01000002.1| 90296 89322 -2 - 975 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2392 CDS gi|481785099|gb|ARAV01000002.1| 92020 90344 -1 - 1677 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2393 CDS gi|481785099|gb|ARAV01000002.1| 92873 92043 -2 - 831 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2394 CDS gi|481785099|gb|ARAV01000002.1| 93448 92879 -1 - 570 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2395 CDS gi|481785099|gb|ARAV01000002.1| 93736 93497 -1 - 240 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2396 CDS gi|481785099|gb|ARAV01000002.1| 94635 93838 -3 - 798 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65904.peg.2397 CDS gi|481785099|gb|ARAV01000002.1| 95504 95040 -2 - 465 ATP synthase protein I - none -
fig|6666666.65904.peg.2398 CDS gi|481785099|gb|ARAV01000002.1| 96764 95571 -2 - 1194 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.65904.peg.2399 CDS gi|481785099|gb|ARAV01000002.1| 97424 96765 -2 - 660 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65904.peg.2400 CDS gi|481785099|gb|ARAV01000002.1| 98324 97452 -2 - 873 Methylase of polypeptide chain release factors - none -
fig|6666666.65904.peg.2401 CDS gi|481785099|gb|ARAV01000002.1| 99384 98311 -3 - 1074 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.65904.peg.2402 CDS gi|481785099|gb|ARAV01000002.1| 101555 99384 -2 - 2172 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65904.peg.2403 CDS gi|481785099|gb|ARAV01000002.1| 101962 103716 1 + 1755 acyl-CoA synthetase - none -
fig|6666666.65904.peg.2404 CDS gi|481785099|gb|ARAV01000002.1| 103923 104927 3 + 1005 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65904.peg.2405 CDS gi|481785099|gb|ARAV01000002.1| 105005 106210 2 + 1206 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65904.peg.2406 CDS gi|481785099|gb|ARAV01000002.1| 106221 106697 3 + 477 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65904.peg.2407 CDS gi|481785099|gb|ARAV01000002.1| 106694 107251 2 + 558 FIG00546849: hypothetical protein - none -
fig|6666666.65904.peg.2408 CDS gi|481785099|gb|ARAV01000002.1| 107781 107377 -3 - 405 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65904.peg.2409 CDS gi|481785099|gb|ARAV01000002.1| 108103 109440 1 + 1338 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.65904.peg.2410 CDS gi|481785099|gb|ARAV01000002.1| 109504 113259 1 + 3756 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65904.peg.2411 CDS gi|481785099|gb|ARAV01000002.1| 113259 114857 3 + 1599 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65904.peg.2412 CDS gi|481785099|gb|ARAV01000002.1| 114860 115552 2 + 693 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65904.peg.2413 CDS gi|481785099|gb|ARAV01000002.1| 115562 116344 2 + 783 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65904.peg.2414 CDS gi|481785099|gb|ARAV01000002.1| 116476 117240 1 + 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.65904.peg.2415 CDS gi|481785099|gb|ARAV01000002.1| 117250 119235 1 + 1986 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.65904.peg.2416 CDS gi|481785099|gb|ARAV01000002.1| 119255 120007 2 + 753 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN - none -
fig|6666666.65904.peg.2417 CDS gi|481785099|gb|ARAV01000002.1| 120923 119994 -2 - 930 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65904.peg.2418 CDS gi|481785099|gb|ARAV01000002.1| 122245 120944 -1 - 1302 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65904.peg.2419 CDS gi|481785099|gb|ARAV01000002.1| 123771 122407 -3 - 1365 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.2420 CDS gi|481785099|gb|ARAV01000002.1| 125433 123781 -3 - 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65904.peg.2421 CDS gi|481785099|gb|ARAV01000002.1| 125692 127341 1 + 1650 predicted hydrolase or acyltransferase - none -
fig|6666666.65904.peg.2422 CDS gi|481785099|gb|ARAV01000002.1| 128262 127774 -3 - 489 Glyoxalase family protein - none -
fig|6666666.65904.peg.2423 CDS gi|481785099|gb|ARAV01000002.1| 128313 129101 3 + 789 Transcriptional regulator, AraC family - none -
fig|6666666.65904.peg.2424 CDS gi|481785099|gb|ARAV01000002.1| 129125 129415 2 + 291 Muconolactone isomerase (EC 5.3.3.4) Catechol branch of beta-ketoadipate pathway
fig|6666666.65904.peg.2425 CDS gi|481785099|gb|ARAV01000002.1| 129680 129477 -2 - 204 FIG00543943: hypothetical protein - none -
fig|6666666.65904.peg.2426 CDS gi|481785099|gb|ARAV01000002.1| 130293 129793 -3 - 501 Transcriptional regulator, MarR family - none -
fig|6666666.65904.peg.2427 CDS gi|481785099|gb|ARAV01000002.1| 130493 131038 2 + 546 Protein yceI precursor - none -
fig|6666666.65904.peg.2428 CDS gi|481785099|gb|ARAV01000002.1| 133724 131103 -2 - 2622 hypothetical protein - none -
fig|6666666.65904.peg.2429 CDS gi|481785099|gb|ARAV01000002.1| 134901 133729 -3 - 1173 DNA double-strand break repair protein Mre11 - none -
fig|6666666.65904.peg.2430 CDS gi|481785099|gb|ARAV01000002.1| 135778 134975 -1 - 804 FIG00545674: hypothetical protein - none -
fig|6666666.65904.peg.2431 CDS gi|481785099|gb|ARAV01000002.1| 138887 135801 -2 - 3087 Helicase, SNF2/RAD54 family - none -
fig|6666666.65904.peg.2432 CDS gi|481785099|gb|ARAV01000002.1| 139015 140607 1 + 1593 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65904.peg.2433 CDS gi|481785099|gb|ARAV01000002.1| 140614 141258 1 + 645 FIG00544279: hypothetical protein - none -
fig|6666666.65904.peg.2434 CDS gi|481785099|gb|ARAV01000002.1| 142009 141209 -1 - 801 Abortive infection protein - none -
fig|6666666.65904.peg.2435 CDS gi|481785099|gb|ARAV01000002.1| 142227 142652 3 + 426 hypothetical membrane protein - none -
fig|6666666.65904.peg.2436 CDS gi|481785099|gb|ARAV01000002.1| 142762 143730 1 + 969 hypothetical protein - none -
fig|6666666.65904.peg.2437 CDS gi|481785099|gb|ARAV01000002.1| 146192 143811 -2 - 2382 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65904.peg.2438 CDS gi|481785099|gb|ARAV01000002.1| 146174 146527 2 + 354 hypothetical protein - none -
fig|6666666.65904.peg.2439 CDS gi|481785099|gb|ARAV01000002.1| 146641 148065 1 + 1425 putative gamma-aminobutyrate permease - none -
fig|6666666.65904.peg.2440 CDS gi|481785099|gb|ARAV01000002.1| 148271 150991 2 + 2721 Endonuclease - none -
fig|6666666.65904.peg.2441 CDS gi|481785099|gb|ARAV01000002.1| 150975 151949 3 + 975 hypothetical protein - none -
fig|6666666.65904.peg.2442 CDS gi|481785099|gb|ARAV01000002.1| 151946 152935 2 + 990 hypothetical protein - none -
fig|6666666.65904.peg.2443 CDS gi|481785099|gb|ARAV01000002.1| 152986 153303 1 + 318 Mobile element protein - none -
fig|6666666.65904.peg.2444 CDS gi|481785099|gb|ARAV01000002.1| 153450 154250 3 + 801 Mobile element protein - none -
fig|6666666.65904.peg.2445 CDS gi|481785099|gb|ARAV01000002.1| 154428 155306 3 + 879 hypothetical protein - none -
fig|6666666.65904.peg.2446 CDS gi|481785099|gb|ARAV01000002.1| 155306 156232 2 + 927 hypothetical protein - none -
fig|6666666.65904.peg.2447 CDS gi|481785099|gb|ARAV01000002.1| 156870 157013 3 + 144 hypothetical protein - none -
fig|6666666.65904.peg.2448 CDS gi|481785099|gb|ARAV01000002.1| 157069 158355 1 + 1287 hypothetical protein - none -
fig|6666666.65904.peg.2449 CDS gi|481785099|gb|ARAV01000002.1| 160328 158352 -2 - 1977 DNA-cytosine methyltransferase (EC 2.1.1.37) DNA repair, bacterial
fig|6666666.65904.peg.2450 CDS gi|481785099|gb|ARAV01000002.1| 161595 160435 -3 - 1161 ATPase component of general energizing module of ECF transporters ECF class transporters
fig|6666666.65904.peg.2451 CDS gi|481785099|gb|ARAV01000002.1| 162263 161586 -2 - 678 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.65904.peg.2452 CDS gi|481785099|gb|ARAV01000002.1| 163031 162264 -2 - 768 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65904.peg.2453 CDS gi|481785099|gb|ARAV01000002.1| 164084 163119 -2 - 966 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65904.peg.2454 CDS gi|481785099|gb|ARAV01000002.1| 164661 164086 -3 - 576 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.65904.peg.2455 CDS gi|481785099|gb|ARAV01000002.1| 166056 164704 -3 - 1353 permease of the major facilitator superfamily - none -
fig|6666666.65904.peg.2456 CDS gi|481785099|gb|ARAV01000002.1| 167299 166049 -1 - 1251 putative multidrug resistance protein - none -
fig|6666666.65904.peg.2457 CDS gi|481785099|gb|ARAV01000002.1| 167803 167937 1 + 135 hypothetical protein - none -
fig|6666666.65904.peg.2458 CDS gi|481785099|gb|ARAV01000002.1| 168838 167990 -1 - 849 FIG00544678: hypothetical protein - none -
fig|6666666.65904.peg.2459 CDS gi|481785099|gb|ARAV01000002.1| 170332 168983 -1 - 1350 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65904.peg.2460 CDS gi|481785099|gb|ARAV01000002.1| 170895 171803 3 + 909 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.2461 CDS gi|481785099|gb|ARAV01000002.1| 171809 175489 2 + 3681 FIG00543822: hypothetical protein - none -
fig|6666666.65904.peg.2462 CDS gi|481785099|gb|ARAV01000002.1| 175614 179360 3 + 3747 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65904.peg.2463 CDS gi|481785099|gb|ARAV01000002.1| 180154 179447 -1 - 708 hypothetical protein - none -
fig|6666666.65904.peg.2464 CDS gi|481785099|gb|ARAV01000002.1| 180834 180283 -3 - 552 hypothetical protein - none -
fig|6666666.65904.peg.2465 CDS gi|481785099|gb|ARAV01000002.1| 181110 182156 3 + 1047 Mrp protein homolog - none -
fig|6666666.65904.peg.2466 CDS gi|481785099|gb|ARAV01000002.1| 182695 182213 -1 - 483 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65904.peg.2467 CDS gi|481785099|gb|ARAV01000002.1| 182887 182762 -1 - 126 hypothetical protein - none -
fig|6666666.65904.peg.2468 CDS gi|481785099|gb|ARAV01000002.1| 183876 183241 -3 - 636 putative RNA polymerase sigma factor - none -
fig|6666666.65904.peg.2469 CDS gi|481785099|gb|ARAV01000002.1| 184022 184669 2 + 648 FIG00945644: hypothetical protein - none -
fig|6666666.65904.peg.2470 CDS gi|481785099|gb|ARAV01000002.1| 185994 184765 -3 - 1230 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65904.peg.2471 CDS gi|481785099|gb|ARAV01000002.1| 186200 187339 2 + 1140 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.65904.peg.2472 CDS gi|481785099|gb|ARAV01000002.1| 187394 188779 2 + 1386 levanase/invertase - none -
fig|6666666.65904.peg.2473 CDS gi|481785099|gb|ARAV01000002.1| 189648 188782 -3 - 867 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.65904.peg.2474 CDS gi|481785099|gb|ARAV01000002.1| 189909 189739 -3 - 171 FIG00545868: hypothetical protein - none -
fig|6666666.65904.peg.2475 CDS gi|481785099|gb|ARAV01000002.1| 190284 189946 -3 - 339 FIG00545506: hypothetical protein - none -
fig|6666666.65904.peg.2476 CDS gi|481785099|gb|ARAV01000002.1| 191066 190320 -2 - 747 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.65904.peg.2477 CDS gi|481785099|gb|ARAV01000002.1| 191875 191063 -1 - 813 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.65904.peg.2478 CDS gi|481785099|gb|ARAV01000002.1| 192732 191929 -3 - 804 FIG00543965: hypothetical protein - none -
fig|6666666.65904.peg.2479 CDS gi|481785099|gb|ARAV01000002.1| 193906 192797 -1 - 1110 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.2480 CDS gi|481785099|gb|ARAV01000002.1| 193946 194875 2 + 930 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.2481 CDS gi|481785099|gb|ARAV01000002.1| 195055 196455 1 + 1401 Phenylalanine-specific permease - none -
fig|6666666.65904.peg.2482 CDS gi|481785099|gb|ARAV01000002.1| 196460 197425 2 + 966 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.2483 CDS gi|481785099|gb|ARAV01000002.1| 198795 197440 -3 - 1356 PE_PGRS family protein - none -
fig|6666666.65904.peg.2484 CDS gi|481785099|gb|ARAV01000002.1| 199541 198942 -2 - 600 FIG00544080: hypothetical protein - none -
fig|6666666.65904.peg.2485 CDS gi|481785099|gb|ARAV01000002.1| 200451 199642 -3 - 810 Similar to ribosomal large subunit pseudouridine synthase A RNA pseudouridine syntheses
fig|6666666.65904.peg.2486 CDS gi|481785099|gb|ARAV01000002.1| 201580 200486 -1 - 1095 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65904.peg.2487 CDS gi|481785099|gb|ARAV01000002.1| 201816 201586 -3 - 231 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.65904.peg.2488 CDS gi|481785099|gb|ARAV01000002.1| 202358 201978 -2 - 381 hypothetical membrane protein - none -
fig|6666666.65904.peg.2489 CDS gi|481785099|gb|ARAV01000002.1| 203279 202386 -2 - 894 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65904.peg.2490 CDS gi|481785099|gb|ARAV01000002.1| 204943 203276 -1 - 1668 LpqW - none -
fig|6666666.65904.peg.2491 CDS gi|481785099|gb|ARAV01000002.1| 206096 204954 -2 - 1143 putative transport protein - none -
fig|6666666.65904.peg.2492 CDS gi|481785099|gb|ARAV01000002.1| 208048 206135 -1 - 1914 GTP-binding protein TypA/BipA - none -
fig|6666666.65904.peg.2493 CDS gi|481785099|gb|ARAV01000002.1| 208403 209107 2 + 705 FIG00544264: hypothetical protein - none -
fig|6666666.65904.peg.2494 CDS gi|481785099|gb|ARAV01000002.1| 209110 209658 1 + 549 FIG00544603: hypothetical protein - none -
fig|6666666.65904.peg.2495 CDS gi|481785099|gb|ARAV01000002.1| 211416 209728 -3 - 1689 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.2496 CDS gi|481785099|gb|ARAV01000002.1| 212414 211413 -2 - 1002 ABC-type transporter, permease component - none -
fig|6666666.65904.peg.2497 CDS gi|481785099|gb|ARAV01000002.1| 213333 212407 -3 - 927 ABC-type transporter, permease component - none -
fig|6666666.65904.peg.2498 CDS gi|481785099|gb|ARAV01000002.1| 215032 213434 -1 - 1599 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.65904.peg.2499 CDS gi|481785099|gb|ARAV01000002.1| 215707 215216 -1 - 492 FIG00546937: hypothetical protein - none -
fig|6666666.65904.peg.2500 CDS gi|481785099|gb|ARAV01000002.1| 216478 215720 -1 - 759 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65904.peg.2501 CDS gi|481785099|gb|ARAV01000002.1| 217794 216475 -3 - 1320 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.65904.peg.2502 CDS gi|481785099|gb|ARAV01000002.1| 218369 217791 -2 - 579 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65904.peg.2503 CDS gi|481785099|gb|ARAV01000002.1| 218864 218499 -2 - 366 hypothetical protein - none -
fig|6666666.65904.peg.2504 CDS gi|481785099|gb|ARAV01000002.1| 219763 218876 -1 - 888 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.65904.peg.2505 CDS gi|481785099|gb|ARAV01000002.1| 219858 220811 3 + 954 Membrane protein, putative - none -
fig|6666666.65904.peg.2506 CDS gi|481785099|gb|ARAV01000002.1| 221614 220808 -1 - 807 Metal transporter, ZIP family - none -
fig|6666666.65904.peg.2507 CDS gi|481785099|gb|ARAV01000002.1| 223022 221664 -2 - 1359 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.65904.peg.2508 CDS gi|481785099|gb|ARAV01000002.1| 223220 223026 -2 - 195 hypothetical protein - none -
fig|6666666.65904.peg.2509 CDS gi|481785099|gb|ARAV01000002.1| 223171 225609 1 + 2439 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65904.peg.2510 CDS gi|481785099|gb|ARAV01000002.1| 225687 226751 3 + 1065 hypothetical protein - none -
fig|6666666.65904.peg.2511 CDS gi|481785099|gb|ARAV01000002.1| 227267 226761 -2 - 507 hypothetical protein - none -
fig|6666666.65904.peg.2512 CDS gi|481785099|gb|ARAV01000002.1| 227391 227960 3 + 570 Protein yceI precursor - none -
fig|6666666.65904.peg.2513 CDS gi|481785099|gb|ARAV01000002.1| 228048 229223 3 + 1176 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65904.peg.2514 CDS gi|481785099|gb|ARAV01000002.1| 229251 230345 3 + 1095 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.65904.peg.2515 CDS gi|481785099|gb|ARAV01000002.1| 231126 230356 -3 - 771 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.2516 CDS gi|481785099|gb|ARAV01000002.1| 232769 231207 -2 - 1563 hypothetical protein - none -
fig|6666666.65904.peg.2517 CDS gi|481785099|gb|ARAV01000002.1| 233656 232892 -1 - 765 oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65904.peg.2518 CDS gi|481785099|gb|ARAV01000002.1| 233894 236377 2 + 2484 Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9); Fructose-6-phosphate phosphoketolase (EC 4.1.2.22) Fermentations: Lactate;
Fermentations: Lactate;
Pentose phosphate pathway;
Pentose phosphate pathway
fig|6666666.65904.peg.2519 CDS gi|481785099|gb|ARAV01000002.1| 238107 236485 -3 - 1623 hypothetical protein - none -
fig|6666666.65904.peg.2520 CDS gi|481785103|gb|ARAV01000001.1| 353 1273 2 + 921 TPR-repeat-containing protein - none -
fig|6666666.65904.peg.2521 CDS gi|481785103|gb|ARAV01000001.1| 1284 2267 3 + 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65904.peg.2522 CDS gi|481785103|gb|ARAV01000001.1| 2270 2437 2 + 168 hypothetical protein - none -
fig|6666666.65904.peg.2523 CDS gi|481785103|gb|ARAV01000001.1| 2465 3286 2 + 822 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.65904.peg.2524 CDS gi|481785103|gb|ARAV01000001.1| 3291 4235 3 + 945 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.65904.peg.2525 CDS gi|481785103|gb|ARAV01000001.1| 4245 5960 3 + 1716 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.65904.peg.2526 CDS gi|481785103|gb|ARAV01000001.1| 6013 7206 1 + 1194 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.65904.peg.2527 CDS gi|481785103|gb|ARAV01000001.1| 7240 8166 1 + 927 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.65904.peg.2528 CDS gi|481785103|gb|ARAV01000001.1| 8271 9905 3 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.65904.peg.2529 CDS gi|481785103|gb|ARAV01000001.1| 9916 10569 1 + 654 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65904.peg.2530 CDS gi|481785103|gb|ARAV01000001.1| 10566 11471 3 + 906 Tyrosine recombinase XerD - none -
fig|6666666.65904.peg.2531 CDS gi|481785103|gb|ARAV01000001.1| 11495 12415 2 + 921 hypothetical protein - none -
fig|6666666.65904.peg.2532 CDS gi|481785103|gb|ARAV01000001.1| 12513 13406 3 + 894 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65904.peg.2533 CDS gi|481785103|gb|ARAV01000001.1| 13407 14204 3 + 798 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65904.peg.2534 CDS gi|481785103|gb|ARAV01000001.1| 14764 14201 -1 - 564 FIG00546511: hypothetical protein - none -
fig|6666666.65904.peg.2535 CDS gi|481785103|gb|ARAV01000001.1| 14926 15699 1 + 774 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2) - none -
fig|6666666.65904.peg.2536 CDS gi|481785103|gb|ARAV01000001.1| 15700 16239 1 + 540 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65904.peg.2537 CDS gi|481785103|gb|ARAV01000001.1| 16285 17199 1 + 915 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65904.peg.2538 CDS gi|481785103|gb|ARAV01000001.1| 17196 17891 3 + 696 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65904.peg.2539 CDS gi|481785103|gb|ARAV01000001.1| 17888 19468 2 + 1581 GTP-binding protein EngA - none -
fig|6666666.65904.peg.2540 CDS gi|481785103|gb|ARAV01000001.1| 19472 20371 2 + 900 hypothetical protein - none -
fig|6666666.65904.peg.2541 CDS gi|481785103|gb|ARAV01000001.1| 21657 20374 -3 - 1284 hypothetical protein - none -
fig|6666666.65904.peg.2542 CDS gi|481785103|gb|ARAV01000001.1| 22702 22067 -1 - 636 FIG00545160: hypothetical protein - none -
fig|6666666.65904.peg.2543 CDS gi|481785103|gb|ARAV01000001.1| 22960 24330 1 + 1371 putative ABC transporter permease protein - none -
fig|6666666.65904.peg.2544 CDS gi|481785103|gb|ARAV01000001.1| 24327 26087 3 + 1761 ABC-type transport system ATPase component - none -
fig|6666666.65904.peg.2545 CDS gi|481785103|gb|ARAV01000001.1| 26180 27064 2 + 885 putative polyhydroxybutyrate depolymerase - none -
fig|6666666.65904.peg.2546 CDS gi|481785103|gb|ARAV01000001.1| 27111 28043 3 + 933 Conserved protein with diacylglycerol kinase catalytic domain - none -
fig|6666666.65904.peg.2547 CDS gi|481785103|gb|ARAV01000001.1| 28469 28194 -2 - 276 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.65904.peg.2548 CDS gi|481785103|gb|ARAV01000001.1| 29716 28556 -1 - 1161 hydrolase of the alpha/beta superfamily - none -
fig|6666666.65904.peg.2549 CDS gi|481785103|gb|ARAV01000001.1| 29845 32136 1 + 2292 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65904.peg.2550 CDS gi|481785103|gb|ARAV01000001.1| 32245 32673 1 + 429 FIG00672531: hypothetical protein - none -
fig|6666666.65904.peg.2551 CDS gi|481785103|gb|ARAV01000001.1| 32736 33482 3 + 747 FIG00545122: hypothetical protein - none -
fig|6666666.65904.peg.2552 CDS gi|481785103|gb|ARAV01000001.1| 33639 34076 3 + 438 hypothetical protein - none -
fig|6666666.65904.peg.2553 CDS gi|481785103|gb|ARAV01000001.1| 34199 34762 2 + 564 FIG00544641: hypothetical protein - none -
fig|6666666.65904.peg.2554 CDS gi|481785103|gb|ARAV01000001.1| 36110 34836 -2 - 1275 Putative secreted protein - none -
fig|6666666.65904.peg.2555 CDS gi|481785103|gb|ARAV01000001.1| 36894 36217 -3 - 678 FIG00545058: hypothetical protein - none -
fig|6666666.65904.peg.2556 CDS gi|481785103|gb|ARAV01000001.1| 38131 37079 -1 - 1053 FIG00546228: hypothetical protein - none -
fig|6666666.65904.peg.2557 CDS gi|481785103|gb|ARAV01000001.1| 39510 38131 -3 - 1380 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.65904.peg.2558 CDS gi|481785103|gb|ARAV01000001.1| 40866 39538 -3 - 1329 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65904.peg.2559 CDS gi|481785103|gb|ARAV01000001.1| 42491 41025 -2 - 1467 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.65904.peg.2560 CDS gi|481785103|gb|ARAV01000001.1| 42575 43012 2 + 438 ComA operon protein 2 - none -
fig|6666666.65904.peg.2561 CDS gi|481785103|gb|ARAV01000001.1| 44105 43023 -2 - 1083 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65904.peg.2562 CDS gi|481785103|gb|ARAV01000001.1| 44181 44783 3 + 603 FIG00544791: hypothetical protein - none -
fig|6666666.65904.peg.2563 CDS gi|481785103|gb|ARAV01000001.1| 46264 44780 -1 - 1485 Phosphomethylpyrimidine kinase (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65904.peg.2564 CDS gi|481785103|gb|ARAV01000001.1| 47363 46491 -2 - 873 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.65904.peg.2565 CDS gi|481785103|gb|ARAV01000001.1| 47647 47396 -1 - 252 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.65904.peg.2566 CDS gi|481785103|gb|ARAV01000001.1| 49773 47683 -3 - 2091 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.65904.peg.2567 CDS gi|481785103|gb|ARAV01000001.1| 51445 50039 -1 - 1407 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65904.peg.2568 CDS gi|481785103|gb|ARAV01000001.1| 51699 52937 3 + 1239 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65904.peg.2569 CDS gi|481785103|gb|ARAV01000001.1| 53318 52950 -2 - 369 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein Alkylphosphonate utilization
fig|6666666.65904.peg.2570 CDS gi|481785103|gb|ARAV01000001.1| 54436 53396 -1 - 1041 Acetylornithine deacetylase (EC 3.5.1.16) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65904.peg.2571 CDS gi|481785103|gb|ARAV01000001.1| 54511 55011 1 + 501 hypothetical protein - none -
fig|6666666.65904.peg.2572 CDS gi|481785103|gb|ARAV01000001.1| 55260 55093 -3 - 168 hypothetical protein - none -
fig|6666666.65904.peg.2573 CDS gi|481785103|gb|ARAV01000001.1| 55982 55275 -2 - 708 Putative secreted protein - none -
fig|6666666.65904.peg.2574 CDS gi|481785103|gb|ARAV01000001.1| 56155 55985 -1 - 171 hypothetical protein - none -
fig|6666666.65904.peg.2575 CDS gi|481785103|gb|ARAV01000001.1| 56438 56809 2 + 372 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65904.peg.2576 CDS gi|481785103|gb|ARAV01000001.1| 57267 56860 -3 - 408 putative translation initiation inhibitor - none -
fig|6666666.65904.peg.2577 CDS gi|481785103|gb|ARAV01000001.1| 58290 57289 -3 - 1002 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65904.peg.2578 CDS gi|481785103|gb|ARAV01000001.1| 59806 58337 -1 - 1470 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65904.peg.2579 CDS gi|481785103|gb|ARAV01000001.1| 60327 59803 -3 - 525 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65904.peg.2580 CDS gi|481785103|gb|ARAV01000001.1| 61145 60426 -2 - 720 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65904.peg.2581 CDS gi|481785103|gb|ARAV01000001.1| 61954 61181 -1 - 774 hypothetical protein - none -
fig|6666666.65904.peg.2582 CDS gi|481785103|gb|ARAV01000001.1| 63057 61951 -3 - 1107 probable metallopeptidase - none -
fig|6666666.65904.peg.2583 CDS gi|481785103|gb|ARAV01000001.1| 63104 63661 2 + 558 hypothetical protein - none -
fig|6666666.65904.peg.2584 CDS gi|481785103|gb|ARAV01000001.1| 66404 63648 -2 - 2757 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65904.peg.2585 CDS gi|481785103|gb|ARAV01000001.1| 67418 66414 -2 - 1005 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65904.peg.2586 CDS gi|481785103|gb|ARAV01000001.1| 67735 67424 -1 - 312 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65904.peg.2587 CDS gi|481785103|gb|ARAV01000001.1| 68729 67791 -2 - 939 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65904.peg.2588 CDS gi|481785103|gb|ARAV01000001.1| 69651 68722 -3 - 930 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65904.peg.2589 CDS gi|481785103|gb|ARAV01000001.1| 71065 69665 -1 - 1401 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65904.peg.2590 CDS gi|481785103|gb|ARAV01000001.1| 71253 71071 -3 - 183 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65904.peg.2591 CDS gi|481785103|gb|ARAV01000001.1| 72873 71311 -3 - 1563 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65904.peg.2592 CDS gi|481785103|gb|ARAV01000001.1| 74395 72884 -1 - 1512 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65904.peg.2593 CDS gi|481785103|gb|ARAV01000001.1| 75238 74405 -1 - 834 RNA methyltransferase - none -
fig|6666666.65904.peg.2594 CDS gi|481785103|gb|ARAV01000001.1| 76497 75280 -3 - 1218 aspartyl aminopeptidase - none -
fig|6666666.65904.peg.2595 CDS gi|481785103|gb|ARAV01000001.1| 76525 77355 1 + 831 RecB family exonuclease - none -
fig|6666666.65904.peg.2596 CDS gi|481785103|gb|ARAV01000001.1| 79004 77352 -2 - 1653 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65904.peg.2597 CDS gi|481785103|gb|ARAV01000001.1| 80316 79009 -3 - 1308 C4-dicarboxylate transporter DcuA - none -
fig|6666666.65904.peg.2598 CDS gi|481785103|gb|ARAV01000001.1| 81859 80435 -1 - 1425 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65904.peg.2599 CDS gi|481785103|gb|ARAV01000001.1| 82776 81931 -3 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65904.peg.2600 CDS gi|481785103|gb|ARAV01000001.1| 83081 82809 -2 - 273 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65904.peg.2601 CDS gi|481785103|gb|ARAV01000001.1| 83739 83083 -3 - 657 putative hydrolase - none -
fig|6666666.65904.peg.2602 CDS gi|481785103|gb|ARAV01000001.1| 84130 83750 -1 - 381 FIG00543988: hypothetical protein - none -
fig|6666666.65904.peg.2603 CDS gi|481785103|gb|ARAV01000001.1| 85372 84155 -1 - 1218 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65904.peg.2604 CDS gi|481785103|gb|ARAV01000001.1| 86240 85383 -2 - 858 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65904.peg.2605 CDS gi|481785103|gb|ARAV01000001.1| 86287 87123 1 + 837 putative oxidoreductase - none -
fig|6666666.65904.peg.2606 CDS gi|481785103|gb|ARAV01000001.1| 87195 88208 3 + 1014 putative lipoprotein - none -
fig|6666666.65904.peg.2607 CDS gi|481785103|gb|ARAV01000001.1| 88215 89300 3 + 1086 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.65904.peg.2608 CDS gi|481785103|gb|ARAV01000001.1| 89622 89275 -3 - 348 hypothetical membrane protein - none -
fig|6666666.65904.peg.2609 CDS gi|481785103|gb|ARAV01000001.1| 90177 89623 -3 - 555 Phospholipid-binding protein - none -
fig|6666666.65904.peg.2610 CDS gi|481785103|gb|ARAV01000001.1| 90797 91300 2 + 504 hypothetical protein - none -
fig|6666666.65904.peg.2611 CDS gi|481785103|gb|ARAV01000001.1| 91383 92687 3 + 1305 putative transmembrane transport protein - none -
fig|6666666.65904.peg.2612 CDS gi|481785103|gb|ARAV01000001.1| 93545 92757 -2 - 789 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65904.peg.2613 CDS gi|481785103|gb|ARAV01000001.1| 94035 93610 -3 - 426 Mannose-6-phosphate isomerase - none -
fig|6666666.65904.peg.2614 CDS gi|481785103|gb|ARAV01000001.1| 94094 94771 2 + 678 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.65904.peg.2615 CDS gi|481785103|gb|ARAV01000001.1| 94776 95336 3 + 561 FIG00545282: hypothetical protein - none -
fig|6666666.65904.peg.2616 CDS gi|481785103|gb|ARAV01000001.1| 96543 95314 -3 - 1230 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65904.peg.2617 CDS gi|481785103|gb|ARAV01000001.1| 96975 96547 -3 - 429 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.65904.peg.2618 CDS gi|481785103|gb|ARAV01000001.1| 97825 96986 -1 - 840 FIG00544636: hypothetical protein - none -
fig|6666666.65904.peg.2619 CDS gi|481785103|gb|ARAV01000001.1| 97859 98608 2 + 750 FIG00546138: hypothetical protein - none -
fig|6666666.65904.peg.2620 CDS gi|481785103|gb|ARAV01000001.1| 99627 98590 -3 - 1038 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.2621 CDS gi|481785103|gb|ARAV01000001.1| 101473 99659 -1 - 1815 hypothetical protein - none -
fig|6666666.65904.peg.2622 CDS gi|481785103|gb|ARAV01000001.1| 102538 102071 -1 - 468 hypothetical protein - none -
fig|6666666.65904.peg.2623 CDS gi|481785103|gb|ARAV01000001.1| 102853 105633 1 + 2781 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65904.peg.2624 CDS gi|481785103|gb|ARAV01000001.1| 105729 106304 3 + 576 Transcriptional regulator, TetR family - none -
fig|6666666.65904.peg.2625 CDS gi|481785103|gb|ARAV01000001.1| 106330 107055 1 + 726 GMP synthase - none -
fig|6666666.65904.peg.2626 CDS gi|481785103|gb|ARAV01000001.1| 107723 107052 -2 - 672 FIG00545571: hypothetical protein - none -
fig|6666666.65904.peg.2627 CDS gi|481785103|gb|ARAV01000001.1| 107814 108083 3 + 270 ACT domain protein - none -
fig|6666666.65904.peg.2628 CDS gi|481785103|gb|ARAV01000001.1| 108097 109461 1 + 1365 FIG00848225: hypothetical protein - none -
fig|6666666.65904.peg.2629 CDS gi|481785103|gb|ARAV01000001.1| 109661 112279 2 + 2619 Ca ion P-type ATPase - none -
fig|6666666.65904.peg.2630 CDS gi|481785103|gb|ARAV01000001.1| 112928 112257 -2 - 672 hypothetical protein - none -
fig|6666666.65904.peg.2631 CDS gi|481785103|gb|ARAV01000001.1| 114622 112994 -1 - 1629 ABC transporter ATP-binding protein - none -
fig|6666666.65904.peg.2632 CDS gi|481785103|gb|ARAV01000001.1| 114724 115149 1 + 426 hypothetical protein - none -
fig|6666666.65904.peg.2633 CDS gi|481785103|gb|ARAV01000001.1| 115655 115218 -2 - 438 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65904.peg.2634 CDS gi|481785103|gb|ARAV01000001.1| 116092 115652 -1 - 441 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65904.peg.2635 CDS gi|481785103|gb|ARAV01000001.1| 117369 116107 -3 - 1263 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.65904.peg.2636 CDS gi|481785103|gb|ARAV01000001.1| 118157 117390 -2 - 768 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65904.peg.2637 CDS gi|481785103|gb|ARAV01000001.1| 119369 118203 -2 - 1167 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65904.peg.2638 CDS gi|481785103|gb|ARAV01000001.1| 120820 119375 -1 - 1446 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65904.peg.2639 CDS gi|481785103|gb|ARAV01000001.1| 121365 120817 -3 - 549 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65904.peg.2640 CDS gi|481785103|gb|ARAV01000001.1| 121713 123344 3 + 1632 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65904.peg.2641 CDS gi|481785103|gb|ARAV01000001.1| 123393 124286 3 + 894 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65904.peg.2642 CDS gi|481785103|gb|ARAV01000001.1| 124291 125076 1 + 786 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65904.peg.2643 CDS gi|481785103|gb|ARAV01000001.1| 125158 126180 1 + 1023 Cytochrome oxidase assembly protein - none -
fig|6666666.65904.peg.2644 CDS gi|481785103|gb|ARAV01000001.1| 126187 127179 1 + 993 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65904.peg.2645 CDS gi|481785103|gb|ARAV01000001.1| 128248 127307 -1 - 942 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65904.peg.2646 CDS gi|481785103|gb|ARAV01000001.1| 128663 130783 2 + 2121 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65904.peg.2647 CDS gi|481785103|gb|ARAV01000001.1| 130816 131895 1 + 1080 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.65904.peg.2648 CDS gi|481785103|gb|ARAV01000001.1| 132019 133557 1 + 1539 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65904.peg.2649 CDS gi|481785103|gb|ARAV01000001.1| 133588 134517 1 + 930 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65904.peg.2650 CDS gi|481785103|gb|ARAV01000001.1| 134537 135262 2 + 726 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65904.peg.2651 CDS gi|481785103|gb|ARAV01000001.1| 136514 135351 -2 - 1164 sarcosine oxidase( EC:1.5.3.1 ) - none -
fig|6666666.65904.peg.2652 CDS gi|481785103|gb|ARAV01000001.1| 137686 136538 -1 - 1149 Ornithine cyclodeaminase (EC 4.3.1.12) Arginine and Ornithine Degradation
fig|6666666.65904.peg.2653 CDS gi|481785103|gb|ARAV01000001.1| 139033 137690 -1 - 1344 Ammonium transporter Ammonia assimilation
fig|6666666.65904.peg.2654 CDS gi|481785103|gb|ARAV01000001.1| 139493 139260 -2 - 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65904.peg.2655 CDS gi|481785103|gb|ARAV01000001.1| 142346 139572 -2 - 2775 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Fermentations: Mixed acid;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65904.peg.2656 CDS gi|481785103|gb|ARAV01000001.1| 143276 142494 -2 - 783 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.2657 CDS gi|481785103|gb|ARAV01000001.1| 144540 143323 -3 - 1218 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65904.peg.2658 CDS gi|481785103|gb|ARAV01000001.1| 145704 144694 -3 - 1011 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65904.peg.2659 CDS gi|481785103|gb|ARAV01000001.1| 147019 146036 -1 - 984 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65904.peg.2660 CDS gi|481785103|gb|ARAV01000001.1| 148008 147037 -3 - 972 Hypothetical protein UPF0052 - none -
fig|6666666.65904.peg.2661 CDS gi|481785103|gb|ARAV01000001.1| 148936 148046 -1 - 891 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.65904.peg.2662 CDS gi|481785103|gb|ARAV01000001.1| 151044 148972 -3 - 2073 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65904.peg.2663 CDS gi|481785103|gb|ARAV01000001.1| 151577 151047 -2 - 531 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65904.peg.2664 CDS gi|481785103|gb|ARAV01000001.1| 152141 151656 -2 - 486 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.65904.peg.2665 CDS gi|481785103|gb|ARAV01000001.1| 153403 152144 -1 - 1260 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65904.peg.2666 CDS gi|481785103|gb|ARAV01000001.1| 154002 153415 -3 - 588 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65904.peg.2667 CDS gi|481785103|gb|ARAV01000001.1| 154980 154003 -3 - 978 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65904.peg.2668 CDS gi|481785103|gb|ARAV01000001.1| 155623 154967 -1 - 657 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65904.peg.2669 CDS gi|481785103|gb|ARAV01000001.1| 157122 155629 -3 - 1494 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.65904.peg.2670 CDS gi|481785103|gb|ARAV01000001.1| 158090 157119 -2 - 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.65904.peg.2671 CDS gi|481785103|gb|ARAV01000001.1| 158602 158090 -1 - 513 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65904.peg.2672 CDS gi|481785103|gb|ARAV01000001.1| 160702 158672 -1 - 2031 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65904.peg.2673 CDS gi|481785103|gb|ARAV01000001.1| 161934 160720 -3 - 1215 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65904.peg.2674 CDS gi|481785103|gb|ARAV01000001.1| 163275 162037 -3 - 1239 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65904.peg.2675 CDS gi|481785103|gb|ARAV01000001.1| 164243 163950 -2 - 294 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65904.peg.2676 CDS gi|481785103|gb|ARAV01000001.1| 164840 164250 -2 - 591 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65904.peg.2677 CDS gi|481785103|gb|ARAV01000001.1| 165167 164844 -2 - 324 integration host factor - none -
fig|6666666.65904.peg.2678 CDS gi|481785103|gb|ARAV01000001.1| 166183 165386 -1 - 798 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.65904.peg.2679 CDS gi|481785103|gb|ARAV01000001.1| 169540 166184 -1 - 3357 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65904.peg.2680 CDS gi|481785103|gb|ARAV01000001.1| 170703 169558 -3 - 1146 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65904.peg.2681 CDS gi|481785103|gb|ARAV01000001.1| 172130 170754 -2 - 1377 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis;
Zinc regulated enzymes
fig|6666666.65904.peg.2682 CDS gi|481785103|gb|ARAV01000001.1| 173068 172139 -1 - 930 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.65904.peg.2683 CDS gi|481785103|gb|ARAV01000001.1| 173635 173069 -1 - 567 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.65904.peg.2684 CDS gi|481785103|gb|ARAV01000001.1| 173803 175149 1 + 1347 Cell division inhibitor Persister Cells
fig|6666666.65904.peg.2685 CDS gi|481785103|gb|ARAV01000001.1| 175186 175656 1 + 471 FIG00544983: hypothetical protein - none -
fig|6666666.65904.peg.2686 CDS gi|481785103|gb|ARAV01000001.1| 175646 176086 2 + 441 hypothetical protein - none -
fig|6666666.65904.peg.2687 CDS gi|481785103|gb|ARAV01000001.1| 176934 176083 -3 - 852 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.65904.peg.2688 CDS gi|481785103|gb|ARAV01000001.1| 177458 176949 -2 - 510 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65904.peg.2689 CDS gi|481785103|gb|ARAV01000001.1| 178021 177458 -1 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65904.peg.2690 CDS gi|481785103|gb|ARAV01000001.1| 179157 178066 -3 - 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65904.peg.2691 CDS gi|481785103|gb|ARAV01000001.1| 179597 179163 -2 - 435 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65904.peg.2692 CDS gi|481785103|gb|ARAV01000001.1| 180674 179601 -2 - 1074 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.2693 CDS gi|481785103|gb|ARAV01000001.1| 181253 180690 -2 - 564 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.2694 CDS gi|481785103|gb|ARAV01000001.1| 182474 181254 -2 - 1221 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.2695 CDS gi|481785103|gb|ARAV01000001.1| 182855 182505 -2 - 351 signal peptidase - none -
fig|6666666.65904.peg.2696 CDS gi|481785103|gb|ARAV01000001.1| 183753 182944 -3 - 810 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65904.peg.2697 CDS gi|481785103|gb|ARAV01000001.1| 184933 183767 -1 - 1167 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65904.peg.2698 CDS gi|481785103|gb|ARAV01000001.1| 185475 184933 -3 - 543 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65904.peg.2699 CDS gi|481785103|gb|ARAV01000001.1| 188283 185614 -3 - 2670 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65904.peg.2700 CDS gi|481785103|gb|ARAV01000001.1| 189739 188348 -1 - 1392 ATPase, AAA family - none -
fig|6666666.65904.peg.2701 CDS gi|481785103|gb|ARAV01000001.1| 190908 189754 -3 - 1155 FIG00544116: hypothetical protein - none -
fig|6666666.65904.peg.2702 CDS gi|481785103|gb|ARAV01000001.1| 190945 191061 1 + 117 hypothetical protein - none -
fig|6666666.65904.peg.2703 CDS gi|481785103|gb|ARAV01000001.1| 192972 191158 -3 - 1815 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65904.peg.2704 CDS gi|481785103|gb|ARAV01000001.1| 193093 193995 1 + 903 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65904.peg.2705 CDS gi|481785103|gb|ARAV01000001.1| 196680 194005 -3 - 2676 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.65904.peg.2706 CDS gi|481785103|gb|ARAV01000001.1| 196706 197434 2 + 729 Putative CBS domain containing protein - none -
fig|6666666.65904.peg.2707 CDS gi|481785103|gb|ARAV01000001.1| 197552 198670 2 + 1119 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.65904.peg.2708 CDS gi|481785103|gb|ARAV01000001.1| 198670 199344 1 + 675 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.65904.peg.2709 CDS gi|481785103|gb|ARAV01000001.1| 199383 199679 3 + 297 hypothetical protein - none -
fig|6666666.65904.peg.2710 CDS gi|481785103|gb|ARAV01000001.1| 199770 201131 3 + 1362 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.65904.peg.2711 CDS gi|481785103|gb|ARAV01000001.1| 201186 202601 3 + 1416 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65904.peg.2712 CDS gi|481785103|gb|ARAV01000001.1| 204290 202602 -2 - 1689 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.65904.peg.2713 CDS gi|481785103|gb|ARAV01000001.1| 205003 204287 -1 - 717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase (EC 3.1.3.77) - none -
fig|6666666.65904.peg.2714 CDS gi|481785103|gb|ARAV01000001.1| 205659 205066 -3 - 594 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) - none -
fig|6666666.65904.peg.2715 CDS gi|481785103|gb|ARAV01000001.1| 207273 205729 -3 - 1545 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.65904.peg.2716 CDS gi|481785103|gb|ARAV01000001.1| 208707 207406 -3 - 1302 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65904.peg.2717 CDS gi|481785103|gb|ARAV01000001.1| 209366 208719 -2 - 648 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.65904.peg.2718 CDS gi|481785103|gb|ARAV01000001.1| 209956 209456 -1 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.65904.peg.2719 CDS gi|481785103|gb|ARAV01000001.1| 210073 210954 1 + 882 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65904.peg.2720 CDS gi|481785103|gb|ARAV01000001.1| 211156 211467 1 + 312 hypothetical protein - none -
fig|6666666.65904.peg.2721 CDS gi|481785103|gb|ARAV01000001.1| 213582 211624 -3 - 1959 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.65904.peg.2722 CDS gi|481785103|gb|ARAV01000001.1| 215925 213748 -3 - 2178 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65904.peg.2723 CDS gi|481785103|gb|ARAV01000001.1| 216628 216068 -1 - 561 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65904.peg.2724 CDS gi|481785103|gb|ARAV01000001.1| 218126 216615 -2 - 1512 dipeptide-binding protein DciAE - none -
fig|6666666.65904.peg.2725 CDS gi|481785103|gb|ARAV01000001.1| 219498 218302 -3 - 1197 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65904.peg.2726 CDS gi|481785103|gb|ARAV01000001.1| 221291 219501 -2 - 1791 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65904.peg.2727 CDS gi|481785103|gb|ARAV01000001.1| 221311 221427 1 + 117 hypothetical protein - none -
fig|6666666.65904.peg.2728 CDS gi|481785103|gb|ARAV01000001.1| 222043 221579 -1 - 465 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.65904.peg.2729 CDS gi|481785103|gb|ARAV01000001.1| 223212 222121 -3 - 1092 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65904.peg.2730 CDS gi|481785103|gb|ARAV01000001.1| 223847 223239 -2 - 609 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65904.peg.2731 CDS gi|481785103|gb|ARAV01000001.1| 224359 223844 -1 - 516 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65904.peg.2732 CDS gi|481785103|gb|ARAV01000001.1| 225254 224502 -2 - 753 FIG000859: hypothetical protein - none -
fig|6666666.65904.peg.2733 CDS gi|481785103|gb|ARAV01000001.1| 226291 225428 -1 - 864 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.65904.peg.2734 CDS gi|481785103|gb|ARAV01000001.1| 226343 226828 2 + 486 FIG00546244: hypothetical protein - none -
fig|6666666.65904.peg.2735 CDS gi|481785103|gb|ARAV01000001.1| 227297 226839 -2 - 459 FIG053954: Probable conserved membrane protein - none -
fig|6666666.65904.peg.2736 CDS gi|481785103|gb|ARAV01000001.1| 228397 227297 -1 - 1101 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.65904.peg.2737 CDS gi|481785103|gb|ARAV01000001.1| 229343 228411 -2 - 933 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.65904.peg.2738 CDS gi|481785103|gb|ARAV01000001.1| 230048 229347 -2 - 702 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65904.peg.2739 CDS gi|481785103|gb|ARAV01000001.1| 230589 230041 -3 - 549 FIG049476: HIT family protein - none -
fig|6666666.65904.peg.2740 CDS gi|481785103|gb|ARAV01000001.1| 232684 230618 -1 - 2067 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.65904.peg.2741 CDS gi|481785103|gb|ARAV01000001.1| 234083 232800 -2 - 1284 Dyp-type peroxidase family protein - none -
fig|6666666.65904.peg.2742 CDS gi|481785103|gb|ARAV01000001.1| 234741 234130 -3 - 612 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65904.peg.2743 CDS gi|481785103|gb|ARAV01000001.1| 235335 234766 -3 - 570 FIG00543909: hypothetical protein - none -
fig|6666666.65904.peg.2744 CDS gi|481785103|gb|ARAV01000001.1| 236746 237426 1 + 681 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.65904.peg.2745 CDS gi|481785103|gb|ARAV01000001.1| 237548 238693 2 + 1146 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65904.peg.2746 CDS gi|481785103|gb|ARAV01000001.1| 238644 239045 3 + 402 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65904.peg.2747 CDS gi|481785103|gb|ARAV01000001.1| 239832 239131 -3 - 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65904.peg.2748 CDS gi|481785103|gb|ARAV01000001.1| 240040 240678 1 + 639 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65904.peg.2749 CDS gi|481785103|gb|ARAV01000001.1| 240689 241873 2 + 1185 Ribonuclease D (EC 3.1.26.3) - none -
fig|6666666.65904.peg.2750 CDS gi|481785103|gb|ARAV01000001.1| 243799 241877 -1 - 1923 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65904.peg.2751 CDS gi|481785103|gb|ARAV01000001.1| 245099 243867 -2 - 1233 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.65904.peg.2752 CDS gi|481785103|gb|ARAV01000001.1| 245962 245096 -1 - 867 FIG00545882: hypothetical protein - none -
fig|6666666.65904.peg.2753 CDS gi|481785103|gb|ARAV01000001.1| 246461 245994 -2 - 468 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65904.peg.2754 CDS gi|481785103|gb|ARAV01000001.1| 246598 247074 1 + 477 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65904.peg.2755 CDS gi|481785103|gb|ARAV01000001.1| 247448 247158 -2 - 291 FIG00545109: hypothetical protein - none -
fig|6666666.65904.peg.2756 CDS gi|481785103|gb|ARAV01000001.1| 248476 247595 -1 - 882 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.65904.peg.2757 CDS gi|481785103|gb|ARAV01000001.1| 248542 249300 1 + 759 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65904.peg.2758 CDS gi|481785103|gb|ARAV01000001.1| 249498 250937 3 + 1440 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65904.peg.2759 CDS gi|481785103|gb|ARAV01000001.1| 252286 251015 -1 - 1272 10 TMS hypothetical membrane protein - none -
fig|6666666.65904.peg.2760 CDS gi|481785103|gb|ARAV01000001.1| 253032 252301 -3 - 732 hypothetical protein - none -
fig|6666666.65904.peg.2761 CDS gi|481785103|gb|ARAV01000001.1| 254882 253128 -2 - 1755 DNA or RNA helicases of superfamily II - none -
fig|6666666.65904.peg.2762 CDS gi|481785103|gb|ARAV01000001.1| 255127 254879 -1 - 249 hypothetical protein - none -
fig|6666666.65904.peg.2763 CDS gi|481785103|gb|ARAV01000001.1| 255170 255667 2 + 498 FIG00545207: hypothetical protein - none -
fig|6666666.65904.peg.2764 CDS gi|481785103|gb|ARAV01000001.1| 255698 257224 2 + 1527 Putative transferase - none -
fig|6666666.65904.peg.2765 CDS gi|481785103|gb|ARAV01000001.1| 257255 257668 2 + 414 D-tyrosyl-tRNA(Tyr) deacylase CBSS-342610.3.peg.283;
D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65904.peg.2766 CDS gi|481785103|gb|ARAV01000001.1| 257760 258749 3 + 990 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65904.peg.2767 CDS gi|481785103|gb|ARAV01000001.1| 258883 259569 1 + 687 Iron-dependent repressor IdeR/DtxR - none -
fig|6666666.65904.peg.2768 CDS gi|481785103|gb|ARAV01000001.1| 259579 260571 1 + 993 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.65904.peg.2769 CDS gi|481785103|gb|ARAV01000001.1| 261769 260588 -1 - 1182 hypothetical protein - none -
fig|6666666.65904.peg.2770 CDS gi|481785103|gb|ARAV01000001.1| 262001 263071 2 + 1071 FIG00544614: hypothetical protein - none -
fig|6666666.65904.peg.2771 CDS gi|481785103|gb|ARAV01000001.1| 263142 265685 3 + 2544 putative helicase - none -
fig|6666666.65904.peg.2772 CDS gi|481785103|gb|ARAV01000001.1| 265786 269235 1 + 3450 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.65904.peg.2773 CDS gi|481785103|gb|ARAV01000001.1| 269672 269232 -2 - 441 Transcriptional regulator, AsnC family - none -
fig|6666666.65904.peg.2774 CDS gi|481785103|gb|ARAV01000001.1| 269803 271038 1 + 1236 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.65904.peg.2775 CDS gi|481785103|gb|ARAV01000001.1| 271189 272145 1 + 957 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65904.peg.2776 CDS gi|481785103|gb|ARAV01000001.1| 273174 272155 -3 - 1020 hypothetical membrane protein - none -
fig|6666666.65904.peg.2777 CDS gi|481785103|gb|ARAV01000001.1| 273274 277164 1 + 3891 ATP-dependent helicase HrpA - none -
fig|6666666.65904.peg.2778 CDS gi|481785103|gb|ARAV01000001.1| 277649 277179 -2 - 471 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.65904.peg.2779 CDS gi|481785103|gb|ARAV01000001.1| 278363 279046 2 + 684 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65904.peg.2780 CDS gi|481785103|gb|ARAV01000001.1| 279221 280000 2 + 780 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65904.peg.2781 CDS gi|481785103|gb|ARAV01000001.1| 280182 280778 3 + 597 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65904.peg.2782 CDS gi|481785103|gb|ARAV01000001.1| 281016 280816 -3 - 201 Mobile element protein - none -
fig|6666666.65904.rna.1 RNA gi|481784870|gb|ARAV01000060.1| 1035 14 -3 - 1022 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65904.rna.2 RNA gi|481785003|gb|ARAV01000026.1| 6981 6909 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.65904.rna.3 RNA gi|481785003|gb|ARAV01000026.1| 18033 17912 -3 - 122 5S RNA - none -
fig|6666666.65904.rna.4 RNA gi|481785011|gb|ARAV01000024.1| 19215 19094 -3 - 122 5S RNA - none -
fig|6666666.65904.rna.5 RNA gi|481785033|gb|ARAV01000019.1| 18975 18903 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.65904.rna.6 RNA gi|481785041|gb|ARAV01000016.1| 60827 60900 2 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.65904.rna.7 RNA gi|481785044|gb|ARAV01000015.1| 46715 46642 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.65904.rna.8 RNA gi|481785044|gb|ARAV01000015.1| 46990 46917 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.65904.rna.9 RNA gi|481785044|gb|ARAV01000015.1| 48565 48494 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.65904.rna.10 RNA gi|481785044|gb|ARAV01000015.1| 68215 68288 1 + 74 tRNA-Arg-TCT - none -
fig|6666666.65904.rna.11 RNA gi|481785049|gb|ARAV01000014.1| 33819 33900 3 + 82 tRNA-Leu-TAG - none -
fig|6666666.65904.rna.12 RNA gi|481785049|gb|ARAV01000014.1| 57177 57105 -3 - 73 tRNA-Lys-CTT - none -
fig|6666666.65904.rna.13 RNA gi|481785049|gb|ARAV01000014.1| 75871 75799 -1 - 73 tRNA-His-GTG - none -
fig|6666666.65904.rna.14 RNA gi|481785052|gb|ARAV01000013.1| 84453 84526 3 + 74 tRNA-Met-CAT - none -
fig|6666666.65904.rna.15 RNA gi|481785056|gb|ARAV01000012.1| 16995 16922 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.65904.rna.16 RNA gi|481785056|gb|ARAV01000012.1| 18617 18689 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.65904.rna.17 RNA gi|481785060|gb|ARAV01000011.1| 73534 73464 -1 - 71 tRNA-Gly-CCC tRNAs
fig|6666666.65904.rna.18 RNA gi|481785064|gb|ARAV01000010.1| 5903 5820 -2 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.65904.rna.19 RNA gi|481785064|gb|ARAV01000010.1| 46961 46889 -2 - 73 tRNA-Ala-TGC - none -
fig|6666666.65904.rna.20 RNA gi|481785064|gb|ARAV01000010.1| 51512 51440 -2 - 73 tRNA-Ala-TGC - none -
fig|6666666.65904.rna.21 RNA gi|481785064|gb|ARAV01000010.1| 51598 51525 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.65904.rna.22 RNA gi|481785072|gb|ARAV01000008.1| 100932 100860 -3 - 73 tRNA-Thr-CGT - none -
fig|6666666.65904.rna.23 RNA gi|481785072|gb|ARAV01000008.1| 130313 130386 2 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.65904.rna.24 RNA gi|481785077|gb|ARAV01000007.1| 153062 152990 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.65904.rna.25 RNA gi|481785077|gb|ARAV01000007.1| 153210 153137 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.65904.rna.26 RNA gi|481785077|gb|ARAV01000007.1| 153319 153247 -1 - 73 tRNA-Thr-GGT - none -
fig|6666666.65904.rna.27 RNA gi|481785077|gb|ARAV01000007.1| 153631 153549 -1 - 83 tRNA-Tyr-GTA - none -
fig|6666666.65904.rna.28 RNA gi|481785081|gb|ARAV01000006.1| 33637 33564 -1 - 74 tRNA-Leu-TAA - none -
fig|6666666.65904.rna.29 RNA gi|481785081|gb|ARAV01000006.1| 39594 39665 3 + 72 tRNA-Gln-TTG - none -
fig|6666666.65904.rna.30 RNA gi|481785081|gb|ARAV01000006.1| 150095 150167 2 + 73 tRNA-Arg-CCT - none -
fig|6666666.65904.rna.31 RNA gi|481785081|gb|ARAV01000006.1| 178398 178277 -3 - 122 5S RNA - none -
fig|6666666.65904.rna.32 RNA gi|481785085|gb|ARAV01000005.1| 129371 129443 2 + 73 tRNA-Thr-TGT - none -
fig|6666666.65904.rna.33 RNA gi|481785085|gb|ARAV01000005.1| 176633 176705 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.65904.rna.34 RNA gi|481785085|gb|ARAV01000005.1| 184220 184292 2 + 73 tRNA-Glu-TTC - none -
fig|6666666.65904.rna.35 RNA gi|481785085|gb|ARAV01000005.1| 184322 184395 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.65904.rna.36 RNA gi|481785085|gb|ARAV01000005.1| 184678 184751 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.65904.rna.37 RNA gi|481785085|gb|ARAV01000005.1| 184773 184845 3 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.65904.rna.38 RNA gi|481785095|gb|ARAV01000003.1| 181585 181669 1 + 85 tRNA-Ser-TGA - none -
fig|6666666.65904.rna.39 RNA gi|481785095|gb|ARAV01000003.1| 199655 199741 2 + 87 tRNA-Ser-GCT - none -
fig|6666666.65904.rna.40 RNA gi|481785095|gb|ARAV01000003.1| 199746 199818 3 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65904.rna.41 RNA gi|481785095|gb|ARAV01000003.1| 206563 206635 1 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65904.rna.42 RNA gi|481785095|gb|ARAV01000003.1| 211606 211690 1 + 85 tRNA-Ser-CGA tRNAs
fig|6666666.65904.rna.43 RNA gi|481785095|gb|ARAV01000003.1| 218068 217983 -1 - 86 tRNA-Pseudo-GGA - none -
fig|6666666.65904.rna.44 RNA gi|481785099|gb|ARAV01000002.1| 1429 1357 -1 - 73 tRNA-Glu-CTC - none -
fig|6666666.65904.rna.45 RNA gi|481785099|gb|ARAV01000002.1| 17145 17073 -3 - 73 tRNA-Glu-CTC - none -
fig|6666666.65904.rna.46 RNA gi|481785099|gb|ARAV01000002.1| 17243 17172 -2 - 72 tRNA-Gln-CTG - none -
fig|6666666.65904.rna.47 RNA gi|481785099|gb|ARAV01000002.1| 127469 127542 2 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.65904.rna.48 RNA gi|481785103|gb|ARAV01000001.1| 95 216 2 + 122 5S RNA - none -
fig|6666666.65904.rna.49 RNA gi|481785103|gb|ARAV01000001.1| 28126 28053 -1 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.65904.rna.50 RNA gi|481785103|gb|ARAV01000001.1| 90335 90420 2 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.65904.rna.51 RNA gi|481785103|gb|ARAV01000001.1| 235912 235841 -1 - 72 tRNA-Val-CAC tRNAs
fig|6666666.65904.rna.52 RNA gi|481785103|gb|ARAV01000001.1| 236138 236210 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.65904.rna.53 RNA gi|481785103|gb|ARAV01000001.1| 236242 236313 1 + 72 tRNA-Val-GAC tRNAs
fig|6666666.65904.rna.54 RNA gi|481785103|gb|ARAV01000001.1| 236336 236408 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.65904.rna.55 RNA gi|481785103|gb|ARAV01000001.1| 236445 236515 3 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.65904.rna.56 RNA gi|481785103|gb|ARAV01000001.1| 236530 236601 1 + 72 tRNA-Val-GAC tRNAs
fig|6666666.65904.rna.57 RNA gi|481785103|gb|ARAV01000001.1| 236626 236698 1 + 73 tRNA-Gly-GCC tRNAs