fig|6666666.65905.peg.1 CDS gi|522808864|gb|ATVG01000026.1| 607 744 1 + 138 hypothetical protein - none -
fig|6666666.65905.peg.2 CDS gi|522808864|gb|ATVG01000026.1| 998 867 -2 - 132 Mobile element protein - none -
fig|6666666.65905.peg.3 CDS gi|522808867|gb|ATVG01000024.1| 1475 489 -2 - 987 hypothetical protein - none -
fig|6666666.65905.peg.4 CDS gi|522808867|gb|ATVG01000024.1| 1645 1896 1 + 252 hypothetical protein - none -
fig|6666666.65905.peg.5 CDS gi|522808867|gb|ATVG01000024.1| 1994 2257 2 + 264 hypothetical protein - none -
fig|6666666.65905.peg.7 CDS gi|522808869|gb|ATVG01000022.1| 1432 173 -1 - 1260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65905.peg.8 CDS gi|522808869|gb|ATVG01000022.1| 2332 1490 -1 - 843 Putative transcriptional regulator - none -
fig|6666666.65905.peg.9 CDS gi|522808869|gb|ATVG01000022.1| 2610 3548 3 + 939 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65905.peg.10 CDS gi|522808869|gb|ATVG01000022.1| 3633 4199 3 + 567 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65905.peg.11 CDS gi|522808869|gb|ATVG01000022.1| 4552 4271 -1 - 282 hypothetical protein - none -
fig|6666666.65905.peg.12 CDS gi|522808871|gb|ATVG01000021.1| 2401 377 -1 - 2025 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65905.peg.13 CDS gi|522808871|gb|ATVG01000021.1| 2477 2662 2 + 186 hypothetical protein - none -
fig|6666666.65905.peg.14 CDS gi|522808871|gb|ATVG01000021.1| 2989 2663 -1 - 327 Cation transport ATPase - none -
fig|6666666.65905.peg.15 CDS gi|522808871|gb|ATVG01000021.1| 3892 3104 -1 - 789 two-component system, sensory transduction histidine kinase - none -
fig|6666666.65905.peg.16 CDS gi|522808871|gb|ATVG01000021.1| 4230 3916 -3 - 315 two-component system, sensory transduction histidine kinase - none -
fig|6666666.65905.peg.17 CDS gi|522808871|gb|ATVG01000021.1| 4949 4227 -2 - 723 two-component system, response regulator - none -
fig|6666666.65905.peg.18 CDS gi|522808871|gb|ATVG01000021.1| 5324 5929 2 + 606 putative exported protein - none -
fig|6666666.65905.peg.19 CDS gi|522808871|gb|ATVG01000021.1| 6336 5968 -3 - 369 hypothetical protein - none -
fig|6666666.65905.peg.20 CDS gi|522808871|gb|ATVG01000021.1| 6376 7482 1 + 1107 Multicopper oxidase Copper homeostasis
fig|6666666.65905.peg.21 CDS gi|522808871|gb|ATVG01000021.1| 8808 9167 3 + 360 Transcriptional regulator ArsR family - none -
fig|6666666.65905.peg.22 CDS gi|522808871|gb|ATVG01000021.1| 9164 9763 2 + 600 cadmium resistance transporter, putative - none -
fig|6666666.65905.peg.23 CDS gi|522808877|gb|ATVG01000020.1| 2840 492 -2 - 2349 hypothetical protein - none -
fig|6666666.65905.peg.24 CDS gi|522808877|gb|ATVG01000020.1| 4117 2837 -1 - 1281 possible esterase - none -
fig|6666666.65905.peg.25 CDS gi|522808877|gb|ATVG01000020.1| 4327 5526 1 + 1200 periplasmic binding protein - none -
fig|6666666.65905.peg.26 CDS gi|522808877|gb|ATVG01000020.1| 5560 6717 1 + 1158 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.65905.peg.27 CDS gi|522808877|gb|ATVG01000020.1| 6717 7457 3 + 741 Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) - none -
fig|6666666.65905.peg.28 CDS gi|522808877|gb|ATVG01000020.1| 8386 7454 -1 - 933 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis
fig|6666666.65905.peg.29 CDS gi|522808877|gb|ATVG01000020.1| 8522 9016 2 + 495 FIG00544249: hypothetical protein - none -
fig|6666666.65905.peg.30 CDS gi|522808877|gb|ATVG01000020.1| 9016 9498 1 + 483 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) - none -
fig|6666666.65905.peg.31 CDS gi|522808877|gb|ATVG01000020.1| 9559 9759 1 + 201 FIG00546156: hypothetical protein - none -
fig|6666666.65905.peg.32 CDS gi|522808877|gb|ATVG01000020.1| 11033 9951 -2 - 1083 Conserved protein - none -
fig|6666666.65905.peg.33 CDS gi|522808877|gb|ATVG01000020.1| 11137 13680 1 + 2544 putative membrane protein - none -
fig|6666666.65905.peg.34 CDS gi|522808877|gb|ATVG01000020.1| 13681 14937 1 + 1257 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.35 CDS gi|522808877|gb|ATVG01000020.1| 15644 14919 -2 - 726 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.36 CDS gi|522808877|gb|ATVG01000020.1| 15643 17208 1 + 1566 Putative nucleoside-diphosphate-sugar epimerase - none -
fig|6666666.65905.peg.37 CDS gi|522808877|gb|ATVG01000020.1| 18806 19735 2 + 930 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.38 CDS gi|522808877|gb|ATVG01000020.1| 19758 21326 3 + 1569 Na+/H+ antiporter - none -
fig|6666666.65905.peg.39 CDS gi|522808877|gb|ATVG01000020.1| 21951 21310 -3 - 642 hypothetical protein - none -
fig|6666666.65905.peg.40 CDS gi|522808877|gb|ATVG01000020.1| 22106 22972 2 + 867 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65905.peg.41 CDS gi|522808879|gb|ATVG01000019.1| 589 1545 1 + 957 TPR-repeat-containing protein - none -
fig|6666666.65905.peg.42 CDS gi|522808879|gb|ATVG01000019.1| 1551 2534 3 + 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65905.peg.43 CDS gi|522808879|gb|ATVG01000019.1| 2534 2701 2 + 168 hypothetical protein - none -
fig|6666666.65905.peg.44 CDS gi|522808879|gb|ATVG01000019.1| 2701 3516 1 + 816 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.65905.peg.45 CDS gi|522808879|gb|ATVG01000019.1| 3513 4394 3 + 882 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.65905.peg.46 CDS gi|522808879|gb|ATVG01000019.1| 4406 6103 2 + 1698 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.65905.peg.47 CDS gi|522808879|gb|ATVG01000019.1| 6233 7336 2 + 1104 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.65905.peg.48 CDS gi|522808879|gb|ATVG01000019.1| 7381 8328 1 + 948 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.65905.peg.49 CDS gi|522808879|gb|ATVG01000019.1| 8331 8981 3 + 651 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65905.peg.50 CDS gi|522808879|gb|ATVG01000019.1| 8978 9919 2 + 942 Tyrosine recombinase XerD - none -
fig|6666666.65905.peg.51 CDS gi|522808879|gb|ATVG01000019.1| 10013 10879 2 + 867 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65905.peg.52 CDS gi|522808879|gb|ATVG01000019.1| 10876 11664 1 + 789 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65905.peg.53 CDS gi|522808879|gb|ATVG01000019.1| 11676 12239 3 + 564 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65905.peg.54 CDS gi|522808879|gb|ATVG01000019.1| 12293 13243 2 + 951 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65905.peg.55 CDS gi|522808879|gb|ATVG01000019.1| 13243 13941 1 + 699 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65905.peg.56 CDS gi|522808879|gb|ATVG01000019.1| 13934 15568 2 + 1635 GTP-binding protein EngA - none -
fig|6666666.65905.peg.57 CDS gi|522808879|gb|ATVG01000019.1| 16371 15580 -3 - 792 FIG00545160: hypothetical protein - none -
fig|6666666.65905.peg.58 CDS gi|522808879|gb|ATVG01000019.1| 16459 17829 1 + 1371 putative ABC transporter permease protein - none -
fig|6666666.65905.peg.59 CDS gi|522808879|gb|ATVG01000019.1| 17868 19583 3 + 1716 putative ABC transporter permease protein - none -
fig|6666666.65905.peg.60 CDS gi|522808879|gb|ATVG01000019.1| 19585 20589 1 + 1005 putative polyhydroxybutyrate depolymerase - none -
fig|6666666.65905.peg.61 CDS gi|522808879|gb|ATVG01000019.1| 21826 20624 -1 - 1203 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.65905.peg.62 CDS gi|522808879|gb|ATVG01000019.1| 21917 22108 2 + 192 hypothetical protein - none -
fig|6666666.65905.peg.63 CDS gi|522808879|gb|ATVG01000019.1| 23731 22145 -1 - 1587 hypothetical protein - none -
fig|6666666.65905.peg.64 CDS gi|522808879|gb|ATVG01000019.1| 24841 24068 -1 - 774 No significant database matches - none -
fig|6666666.65905.peg.65 CDS gi|522808881|gb|ATVG01000018.1| 876 1619 3 + 744 putative ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.66 CDS gi|522808881|gb|ATVG01000018.1| 1619 4237 2 + 2619 ABC-type transporter, permease component - none -
fig|6666666.65905.peg.67 CDS gi|522808881|gb|ATVG01000018.1| 4649 4269 -2 - 381 hypothetical membrane protein - none -
fig|6666666.65905.peg.68 CDS gi|522808881|gb|ATVG01000018.1| 4993 4646 -1 - 348 camphor resistance protein CrcB - none -
fig|6666666.65905.peg.69 CDS gi|522808881|gb|ATVG01000018.1| 6452 5025 -2 - 1428 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.65905.peg.70 CDS gi|522808881|gb|ATVG01000018.1| 6685 6488 -1 - 198 hypothetical protein - none -
fig|6666666.65905.peg.71 CDS gi|522808881|gb|ATVG01000018.1| 6650 7039 2 + 390 Conserved membrane protein - none -
fig|6666666.65905.peg.72 CDS gi|522808881|gb|ATVG01000018.1| 7109 7984 2 + 876 FIG00544592: hypothetical protein - none -
fig|6666666.65905.peg.73 CDS gi|522808881|gb|ATVG01000018.1| 8237 9025 2 + 789 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.65905.peg.74 CDS gi|522808881|gb|ATVG01000018.1| 9849 9049 -3 - 801 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.65905.peg.75 CDS gi|522808881|gb|ATVG01000018.1| 10048 10170 1 + 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65905.peg.76 CDS gi|522808881|gb|ATVG01000018.1| 10626 10865 3 + 240 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.65905.peg.77 CDS gi|522808881|gb|ATVG01000018.1| 10893 11333 3 + 441 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65905.peg.78 CDS gi|522808881|gb|ATVG01000018.1| 11466 13628 3 + 2163 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65905.peg.79 CDS gi|522808881|gb|ATVG01000018.1| 14326 13652 -1 - 675 Transcriptional regulator, GntR family - none -
fig|6666666.65905.peg.80 CDS gi|522808881|gb|ATVG01000018.1| 14637 15626 3 + 990 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65905.peg.81 CDS gi|522808881|gb|ATVG01000018.1| 15920 17617 2 + 1698 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65905.peg.82 CDS gi|522808881|gb|ATVG01000018.1| 17710 18576 1 + 867 FIG00546117: hypothetical protein - none -
fig|6666666.65905.peg.83 CDS gi|522808881|gb|ATVG01000018.1| 20671 18695 -1 - 1977 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65905.peg.84 CDS gi|522808881|gb|ATVG01000018.1| 22008 20683 -3 - 1326 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global
fig|6666666.65905.peg.85 CDS gi|522808881|gb|ATVG01000018.1| 22050 22379 3 + 330 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65905.peg.86 CDS gi|522808881|gb|ATVG01000018.1| 22397 22927 2 + 531 Transcriptional regulatory protein - none -
fig|6666666.65905.peg.87 CDS gi|522808881|gb|ATVG01000018.1| 22927 23544 1 + 618 FIG00545125: hypothetical protein - none -
fig|6666666.65905.peg.88 CDS gi|522808881|gb|ATVG01000018.1| 23541 24347 3 + 807 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65905.peg.89 CDS gi|522808881|gb|ATVG01000018.1| 24401 25165 2 + 765 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.65905.peg.90 CDS gi|522808881|gb|ATVG01000018.1| 25173 25979 3 + 807 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended
fig|6666666.65905.peg.91 CDS gi|522808881|gb|ATVG01000018.1| 25980 26582 3 + 603 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65905.peg.92 CDS gi|522808881|gb|ATVG01000018.1| 26969 26637 -2 - 333 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65905.peg.93 CDS gi|522808881|gb|ATVG01000018.1| 27430 27032 -1 - 399 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.65905.peg.94 CDS gi|522808883|gb|ATVG01000017.1| 59 277 2 + 219 Mobile element protein - none -
fig|6666666.65905.peg.95 CDS gi|522808883|gb|ATVG01000017.1| 1044 2369 3 + 1326 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65905.peg.96 CDS gi|522808883|gb|ATVG01000017.1| 2446 2925 1 + 480 FIG00544659: hypothetical protein - none -
fig|6666666.65905.peg.97 CDS gi|522808883|gb|ATVG01000017.1| 2943 5735 3 + 2793 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65905.peg.98 CDS gi|522808883|gb|ATVG01000017.1| 5810 6091 2 + 282 hypothetical protein - none -
fig|6666666.65905.peg.99 CDS gi|522808883|gb|ATVG01000017.1| 6162 6515 3 + 354 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65905.peg.100 CDS gi|522808883|gb|ATVG01000017.1| 6603 7259 3 + 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65905.peg.101 CDS gi|522808883|gb|ATVG01000017.1| 7934 7248 -2 - 687 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65905.peg.102 CDS gi|522808883|gb|ATVG01000017.1| 9181 7931 -1 - 1251 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65905.peg.103 CDS gi|522808883|gb|ATVG01000017.1| 9317 10030 2 + 714 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65905.peg.104 CDS gi|522808883|gb|ATVG01000017.1| 10282 11196 1 + 915 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65905.peg.105 CDS gi|522808883|gb|ATVG01000017.1| 11966 11205 -2 - 762 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65905.peg.106 CDS gi|522808883|gb|ATVG01000017.1| 13290 11959 -3 - 1332 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65905.peg.107 CDS gi|522808883|gb|ATVG01000017.1| 14810 13323 -2 - 1488 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.65905.peg.108 CDS gi|522808883|gb|ATVG01000017.1| 16698 14854 -3 - 1845 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65905.peg.109 CDS gi|522808883|gb|ATVG01000017.1| 17085 18275 3 + 1191 FIG00546120: hypothetical protein - none -
fig|6666666.65905.peg.110 CDS gi|522808883|gb|ATVG01000017.1| 19145 18303 -2 - 843 FIG00544278: hypothetical protein - none -
fig|6666666.65905.peg.111 CDS gi|522808883|gb|ATVG01000017.1| 19273 20568 1 + 1296 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65905.peg.112 CDS gi|522808883|gb|ATVG01000017.1| 20569 21303 1 + 735 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.65905.peg.113 CDS gi|522808883|gb|ATVG01000017.1| 21322 22713 1 + 1392 Similar to tetracycline resistance protein - none -
fig|6666666.65905.peg.114 CDS gi|522808883|gb|ATVG01000017.1| 22740 23402 3 + 663 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65905.peg.115 CDS gi|522808883|gb|ATVG01000017.1| 23405 25129 2 + 1725 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65905.peg.116 CDS gi|522808883|gb|ATVG01000017.1| 25257 26291 3 + 1035 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65905.peg.117 CDS gi|522808883|gb|ATVG01000017.1| 27641 26319 -2 - 1323 FIG00544530: hypothetical protein - none -
fig|6666666.65905.peg.118 CDS gi|522808883|gb|ATVG01000017.1| 28264 27686 -1 - 579 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65905.peg.119 CDS gi|522808883|gb|ATVG01000017.1| 28421 30022 2 + 1602 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65905.peg.120 CDS gi|522808883|gb|ATVG01000017.1| 30178 31632 1 + 1455 Membrane protein - none -
fig|6666666.65905.peg.121 CDS gi|522808883|gb|ATVG01000017.1| 31959 33185 3 + 1227 Manganese transport protein MntH - none -
fig|6666666.65905.peg.122 CDS gi|522808883|gb|ATVG01000017.1| 33516 33241 -3 - 276 Mobile element protein - none -
fig|6666666.65905.peg.123 CDS gi|522808885|gb|ATVG01000016.1| 1049 264 -2 - 786 hypothetical protein - none -
fig|6666666.65905.peg.124 CDS gi|522808885|gb|ATVG01000016.1| 1323 2327 3 + 1005 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65905.peg.125 CDS gi|522808885|gb|ATVG01000016.1| 2570 3319 2 + 750 hypothetical protein - none -
fig|6666666.65905.peg.126 CDS gi|522808885|gb|ATVG01000016.1| 3558 7673 3 + 4116 hypothetical protein - none -
fig|6666666.65905.peg.127 CDS gi|522808885|gb|ATVG01000016.1| 7729 8670 1 + 942 hypothetical protein - none -
fig|6666666.65905.peg.128 CDS gi|522808885|gb|ATVG01000016.1| 9455 8805 -2 - 651 Flavin reductase-like, FMN-binding domain protein - none -
fig|6666666.65905.peg.129 CDS gi|522808885|gb|ATVG01000016.1| 10281 9502 -3 - 780 putative secreted protein - none -
fig|6666666.65905.peg.130 CDS gi|522808885|gb|ATVG01000016.1| 10508 19612 2 + 9105 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65905.peg.131 CDS gi|522808885|gb|ATVG01000016.1| 19621 20037 1 + 417 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65905.peg.132 CDS gi|522808885|gb|ATVG01000016.1| 20529 20041 -3 - 489 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65905.peg.133 CDS gi|522808885|gb|ATVG01000016.1| 20682 20960 3 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65905.peg.134 CDS gi|522808885|gb|ATVG01000016.1| 21076 22338 1 + 1263 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65905.peg.135 CDS gi|522808885|gb|ATVG01000016.1| 22899 22372 -3 - 528 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.65905.peg.136 CDS gi|522808885|gb|ATVG01000016.1| 24128 22893 -2 - 1236 Starvation sensing protein RspA Carbon Starvation
fig|6666666.65905.peg.137 CDS gi|522808885|gb|ATVG01000016.1| 26028 24187 -3 - 1842 Beta-glucuronidase (EC 3.2.1.31) - none -
fig|6666666.65905.peg.138 CDS gi|522808885|gb|ATVG01000016.1| 27577 26096 -1 - 1482 Predicted beta-glucoside transporter, GPH family - none -
fig|6666666.65905.peg.139 CDS gi|522808885|gb|ATVG01000016.1| 29074 27617 -1 - 1458 D-mannonate oxidoreductase (EC 1.1.1.57) - none -
fig|6666666.65905.peg.140 CDS gi|522808885|gb|ATVG01000016.1| 30480 29071 -3 - 1410 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.65905.peg.141 CDS gi|522808885|gb|ATVG01000016.1| 31650 30577 -3 - 1074 transcriptional regulator - none -
fig|6666666.65905.peg.142 CDS gi|522808885|gb|ATVG01000016.1| 32238 31660 -3 - 579 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global
fig|6666666.65905.peg.143 CDS gi|522808885|gb|ATVG01000016.1| 32718 33896 3 + 1179 putative lipoprotein - none -
fig|6666666.65905.peg.144 CDS gi|522808885|gb|ATVG01000016.1| 35389 33974 -1 - 1416 Lipase 1 (EC 3.1.1.3) - none -
fig|6666666.65905.peg.145 CDS gi|522808887|gb|ATVG01000015.1| 82 246 1 + 165 hypothetical protein - none -
fig|6666666.65905.peg.146 CDS gi|522808887|gb|ATVG01000015.1| 1024 539 -1 - 486 hypothetical protein - none -
fig|6666666.65905.peg.147 CDS gi|522808887|gb|ATVG01000015.1| 2293 4809 1 + 2517 hypothetical protein - none -
fig|6666666.65905.peg.148 CDS gi|522808887|gb|ATVG01000015.1| 5484 5816 3 + 333 hypothetical protein - none -
fig|6666666.65905.peg.149 CDS gi|522808887|gb|ATVG01000015.1| 5819 6202 2 + 384 hypothetical protein - none -
fig|6666666.65905.peg.150 CDS gi|522808887|gb|ATVG01000015.1| 6593 6781 2 + 189 hypothetical protein - none -
fig|6666666.65905.peg.151 CDS gi|522808887|gb|ATVG01000015.1| 6768 8336 3 + 1569 hypothetical protein - none -
fig|6666666.65905.peg.152 CDS gi|522808887|gb|ATVG01000015.1| 8320 8748 1 + 429 hypothetical protein - none -
fig|6666666.65905.peg.153 CDS gi|522808887|gb|ATVG01000015.1| 8757 8981 3 + 225 hypothetical protein - none -
fig|6666666.65905.peg.154 CDS gi|522808887|gb|ATVG01000015.1| 9712 9840 1 + 129 hypothetical protein - none -
fig|6666666.65905.peg.155 CDS gi|522808887|gb|ATVG01000015.1| 11425 10769 -1 - 657 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65905.peg.156 CDS gi|522808887|gb|ATVG01000015.1| 11963 11535 -2 - 429 hypothetical protein - none -
fig|6666666.65905.peg.157 CDS gi|522808887|gb|ATVG01000015.1| 12904 12071 -1 - 834 Short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65905.peg.158 CDS gi|522808887|gb|ATVG01000015.1| 13581 12925 -3 - 657 No significant database matches - none -
fig|6666666.65905.peg.159 CDS gi|522808887|gb|ATVG01000015.1| 13811 14125 2 + 315 hypothetical protein - none -
fig|6666666.65905.peg.160 CDS gi|522808887|gb|ATVG01000015.1| 14122 14478 1 + 357 hypothetical protein - none -
fig|6666666.65905.peg.161 CDS gi|522808887|gb|ATVG01000015.1| 15490 14501 -1 - 990 possible hydrolase - none -
fig|6666666.65905.peg.162 CDS gi|522808887|gb|ATVG01000015.1| 15867 17876 3 + 2010 Copper resistance protein D Copper homeostasis
fig|6666666.65905.peg.163 CDS gi|522808887|gb|ATVG01000015.1| 18154 18882 1 + 729 Putative single-strand binding protein - none -
fig|6666666.65905.peg.164 CDS gi|522808887|gb|ATVG01000015.1| 19034 20704 2 + 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.165 CDS gi|522808887|gb|ATVG01000015.1| 20752 21171 1 + 420 FIG00544139: hypothetical protein - none -
fig|6666666.65905.peg.166 CDS gi|522808887|gb|ATVG01000015.1| 21197 21844 2 + 648 FIG00545013: hypothetical protein - none -
fig|6666666.65905.peg.167 CDS gi|522808887|gb|ATVG01000015.1| 21967 23058 1 + 1092 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.168 CDS gi|522808887|gb|ATVG01000015.1| 23562 23152 -3 - 411 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65905.peg.169 CDS gi|522808887|gb|ATVG01000015.1| 24616 23570 -1 - 1047 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65905.peg.170 CDS gi|522808887|gb|ATVG01000015.1| 24763 25926 1 + 1164 Cystathionine gamma-lyase (EC 4.4.1.1) Cysteine Biosynthesis;
Glycine and Serine Utilization;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.171 CDS gi|522808887|gb|ATVG01000015.1| 27863 25923 -2 - 1941 FIG00544299: hypothetical protein - none -
fig|6666666.65905.peg.172 CDS gi|522808887|gb|ATVG01000015.1| 28035 29681 3 + 1647 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.65905.peg.173 CDS gi|522808887|gb|ATVG01000015.1| 29682 30644 3 + 963 putative transport protein - none -
fig|6666666.65905.peg.174 CDS gi|522808887|gb|ATVG01000015.1| 30647 31450 2 + 804 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65905.peg.175 CDS gi|522808887|gb|ATVG01000015.1| 31452 33068 3 + 1617 putative ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.176 CDS gi|522808887|gb|ATVG01000015.1| 33101 34387 2 + 1287 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.65905.peg.177 CDS gi|522808887|gb|ATVG01000015.1| 34447 35082 1 + 636 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65905.peg.178 CDS gi|522808887|gb|ATVG01000015.1| 36523 35135 -1 - 1389 Putative anaerobic c4-dicarboxylate transport protein - none -
fig|6666666.65905.peg.179 CDS gi|522808887|gb|ATVG01000015.1| 39307 36749 -1 - 2559 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65905.peg.180 CDS gi|522808887|gb|ATVG01000015.1| 39434 40075 2 + 642 FIG00544229: hypothetical protein - none -
fig|6666666.65905.peg.181 CDS gi|522808887|gb|ATVG01000015.1| 40156 40638 1 + 483 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65905.peg.182 CDS gi|522808887|gb|ATVG01000015.1| 41444 40845 -2 - 600 hypothetical protein - none -
fig|6666666.65905.peg.183 CDS gi|522808887|gb|ATVG01000015.1| 41955 41551 -3 - 405 hypothetical protein - none -
fig|6666666.65905.peg.184 CDS gi|522808889|gb|ATVG01000014.1| 1930 662 -1 - 1269 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65905.peg.185 CDS gi|522808889|gb|ATVG01000014.1| 2184 2008 -3 - 177 UPF0434 protein YcaR - none -
fig|6666666.65905.peg.186 CDS gi|522808889|gb|ATVG01000014.1| 3651 2209 -3 - 1443 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.65905.peg.187 CDS gi|522808889|gb|ATVG01000014.1| 4918 3677 -1 - 1242 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.65905.peg.188 CDS gi|522808889|gb|ATVG01000014.1| 6166 5138 -1 - 1029 Ornithine cyclodeaminase (EC 4.3.1.12) Arginine and Ornithine Degradation
fig|6666666.65905.peg.189 CDS gi|522808889|gb|ATVG01000014.1| 7682 6216 -2 - 1467 L-asparagine permease - none -
fig|6666666.65905.peg.190 CDS gi|522808889|gb|ATVG01000014.1| 10512 7999 -3 - 2514 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65905.peg.191 CDS gi|522808889|gb|ATVG01000014.1| 11587 10541 -1 - 1047 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65905.peg.192 CDS gi|522808889|gb|ATVG01000014.1| 12469 11654 -1 - 816 FIG011178: rRNA methylase RNA methylation
fig|6666666.65905.peg.193 CDS gi|522808889|gb|ATVG01000014.1| 12981 12598 -3 - 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65905.peg.194 CDS gi|522808889|gb|ATVG01000014.1| 13257 13063 -3 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65905.peg.195 CDS gi|522808889|gb|ATVG01000014.1| 13778 13290 -2 - 489 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65905.peg.196 CDS gi|522808889|gb|ATVG01000014.1| 16939 14117 -1 - 2823 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65905.peg.197 CDS gi|522808889|gb|ATVG01000014.1| 17022 17633 3 + 612 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65905.peg.198 CDS gi|522808889|gb|ATVG01000014.1| 17717 18604 2 + 888 FIG00995839: hypothetical protein - none -
fig|6666666.65905.peg.199 CDS gi|522808889|gb|ATVG01000014.1| 18709 20997 1 + 2289 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65905.peg.200 CDS gi|522808889|gb|ATVG01000014.1| 21430 20990 -1 - 441 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65905.peg.201 CDS gi|522808889|gb|ATVG01000014.1| 21969 21520 -3 - 450 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65905.peg.202 CDS gi|522808889|gb|ATVG01000014.1| 24107 21999 -2 - 2109 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65905.peg.203 CDS gi|522808889|gb|ATVG01000014.1| 24480 24118 -3 - 363 hypothetical protein - none -
fig|6666666.65905.peg.204 CDS gi|522808889|gb|ATVG01000014.1| 25102 24560 -1 - 543 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65905.peg.205 CDS gi|522808889|gb|ATVG01000014.1| 27271 25193 -1 - 2079 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.65905.peg.206 CDS gi|522808889|gb|ATVG01000014.1| 28910 27453 -2 - 1458 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.65905.peg.207 CDS gi|522808889|gb|ATVG01000014.1| 28950 29111 3 + 162 hypothetical protein - none -
fig|6666666.65905.peg.208 CDS gi|522808889|gb|ATVG01000014.1| 29208 29672 3 + 465 FIG00545637: hypothetical protein - none -
fig|6666666.65905.peg.209 CDS gi|522808889|gb|ATVG01000014.1| 32283 29701 -3 - 2583 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65905.peg.210 CDS gi|522808889|gb|ATVG01000014.1| 33960 32851 -3 - 1110 hypothetical protein - none -
fig|6666666.65905.peg.211 CDS gi|522808889|gb|ATVG01000014.1| 34106 33963 -2 - 144 hypothetical protein - none -
fig|6666666.65905.peg.212 CDS gi|522808889|gb|ATVG01000014.1| 37313 35160 -2 - 2154 hypothetical protein - none -
fig|6666666.65905.peg.213 CDS gi|522808889|gb|ATVG01000014.1| 37660 37454 -1 - 207 hypothetical protein - none -
fig|6666666.65905.peg.214 CDS gi|522808889|gb|ATVG01000014.1| 38070 37657 -3 - 414 hypothetical protein - none -
fig|6666666.65905.peg.215 CDS gi|522808889|gb|ATVG01000014.1| 38270 38148 -2 - 123 hypothetical protein - none -
fig|6666666.65905.peg.216 CDS gi|522808889|gb|ATVG01000014.1| 38464 38270 -1 - 195 hypothetical protein - none -
fig|6666666.65905.peg.217 CDS gi|522808889|gb|ATVG01000014.1| 40602 40486 -3 - 117 hypothetical protein - none -
fig|6666666.65905.peg.218 CDS gi|522808889|gb|ATVG01000014.1| 42301 40841 -1 - 1461 Mobile element protein - none -
fig|6666666.65905.peg.219 CDS gi|522808889|gb|ATVG01000014.1| 42622 43854 1 + 1233 hypothetical protein - none -
fig|6666666.65905.peg.220 CDS gi|522808889|gb|ATVG01000014.1| 45002 44793 -2 - 210 hypothetical protein - none -
fig|6666666.65905.peg.221 CDS gi|522808891|gb|ATVG01000013.1| 339 617 3 + 279 DNA-binding response regulator mtrA - none -
fig|6666666.65905.peg.222 CDS gi|522808891|gb|ATVG01000013.1| 690 2426 3 + 1737 Putative two component system sensor kinase - none -
fig|6666666.65905.peg.223 CDS gi|522808891|gb|ATVG01000013.1| 2543 4165 2 + 1623 LpqB - none -
fig|6666666.65905.peg.224 CDS gi|522808891|gb|ATVG01000013.1| 4177 4845 1 + 669 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.65905.peg.225 CDS gi|522808891|gb|ATVG01000013.1| 4968 5645 3 + 678 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65905.peg.226 CDS gi|522808891|gb|ATVG01000013.1| 5859 5617 -3 - 243 hypothetical protein - none -
fig|6666666.65905.peg.227 CDS gi|522808891|gb|ATVG01000013.1| 5875 8403 1 + 2529 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65905.peg.228 CDS gi|522808891|gb|ATVG01000013.1| 8795 8433 -2 - 363 hypothetical protein - none -
fig|6666666.65905.peg.229 CDS gi|522808891|gb|ATVG01000013.1| 9016 9426 1 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.65905.peg.230 CDS gi|522808891|gb|ATVG01000013.1| 9427 9942 1 + 516 FIG00544397: hypothetical protein - none -
fig|6666666.65905.peg.231 CDS gi|522808891|gb|ATVG01000013.1| 10995 9946 -3 - 1050 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65905.peg.232 CDS gi|522808891|gb|ATVG01000013.1| 12289 10988 -1 - 1302 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65905.peg.233 CDS gi|522808891|gb|ATVG01000013.1| 12303 12998 3 + 696 FIG00543821: hypothetical protein - none -
fig|6666666.65905.peg.234 CDS gi|522808891|gb|ATVG01000013.1| 13089 13667 3 + 579 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65905.peg.235 CDS gi|522808891|gb|ATVG01000013.1| 13671 13970 3 + 300 hypothetical protein - none -
fig|6666666.65905.peg.236 CDS gi|522808891|gb|ATVG01000013.1| 14227 15030 1 + 804 Magnesium citrate secondary transporter - none -
fig|6666666.65905.peg.237 CDS gi|522808891|gb|ATVG01000013.1| 15027 15626 3 + 600 Magnesium citrate secondary transporter - none -
fig|6666666.65905.peg.238 CDS gi|522808891|gb|ATVG01000013.1| 16101 15844 -3 - 258 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65905.peg.239 CDS gi|522808891|gb|ATVG01000013.1| 16737 17123 3 + 387 FIG00543921: hypothetical protein - none -
fig|6666666.65905.peg.240 CDS gi|522808891|gb|ATVG01000013.1| 18447 17173 -3 - 1275 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65905.peg.241 CDS gi|522808891|gb|ATVG01000013.1| 19817 18444 -2 - 1374 putative ATP-dependent RNA helicase - none -
fig|6666666.65905.peg.242 CDS gi|522808891|gb|ATVG01000013.1| 19909 20133 1 + 225 FIG00543928: hypothetical protein - none -
fig|6666666.65905.peg.243 CDS gi|522808891|gb|ATVG01000013.1| 20153 21175 2 + 1023 FIG00544386: hypothetical protein - none -
fig|6666666.65905.peg.244 CDS gi|522808891|gb|ATVG01000013.1| 21185 21964 2 + 780 FIG00544868: hypothetical protein - none -
fig|6666666.65905.peg.245 CDS gi|522808891|gb|ATVG01000013.1| 22049 25228 2 + 3180 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65905.peg.246 CDS gi|522808891|gb|ATVG01000013.1| 25221 28529 3 + 3309 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65905.peg.247 CDS gi|522808891|gb|ATVG01000013.1| 28627 29685 1 + 1059 Potassium channel protein Potassium homeostasis
fig|6666666.65905.peg.248 CDS gi|522808891|gb|ATVG01000013.1| 29728 31803 1 + 2076 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65905.peg.249 CDS gi|522808891|gb|ATVG01000013.1| 32917 31781 -1 - 1137 hypothetical protein - none -
fig|6666666.65905.peg.250 CDS gi|522808891|gb|ATVG01000013.1| 32987 33547 2 + 561 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65905.peg.251 CDS gi|522808891|gb|ATVG01000013.1| 34993 33548 -1 - 1446 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65905.peg.252 CDS gi|522808891|gb|ATVG01000013.1| 35151 36143 3 + 993 Lon-like protease with PDZ domain - none -
fig|6666666.65905.peg.253 CDS gi|522808891|gb|ATVG01000013.1| 36855 36148 -3 - 708 No significant database matches - none -
fig|6666666.65905.peg.254 CDS gi|522808891|gb|ATVG01000013.1| 37444 36902 -1 - 543 FIG129854: hypothetical protein - none -
fig|6666666.65905.peg.255 CDS gi|522808891|gb|ATVG01000013.1| 37566 40592 3 + 3027 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65905.peg.256 CDS gi|522808891|gb|ATVG01000013.1| 41554 40931 -1 - 624 putative two-component system response regulator - none -
fig|6666666.65905.peg.257 CDS gi|522808891|gb|ATVG01000013.1| 42623 41547 -2 - 1077 sensor histidine kinase - none -
fig|6666666.65905.peg.258 CDS gi|522808891|gb|ATVG01000013.1| 43374 42616 -3 - 759 putative membrane protein [KO:K01992] - none -
fig|6666666.65905.peg.259 CDS gi|522808891|gb|ATVG01000013.1| 44084 43371 -2 - 714 putative ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.260 CDS gi|522808891|gb|ATVG01000013.1| 44603 44316 -2 - 288 hypothetical protein - none -
fig|6666666.65905.peg.261 CDS gi|522808891|gb|ATVG01000013.1| 45909 44776 -3 - 1134 hypothetical protein - none -
fig|6666666.65905.peg.262 CDS gi|522808891|gb|ATVG01000013.1| 46494 46018 -3 - 477 FIG00546173: hypothetical protein - none -
fig|6666666.65905.peg.263 CDS gi|522808891|gb|ATVG01000013.1| 47492 46638 -2 - 855 hypothetical protein - none -
fig|6666666.65905.peg.264 CDS gi|522808891|gb|ATVG01000013.1| 48033 47611 -3 - 423 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65905.peg.265 CDS gi|522808891|gb|ATVG01000013.1| 48191 49762 2 + 1572 No significant database matches - none -
fig|6666666.65905.peg.266 CDS gi|522808891|gb|ATVG01000013.1| 49919 50257 2 + 339 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65905.peg.267 CDS gi|522808891|gb|ATVG01000013.1| 51470 52246 2 + 777 ABC transporter, ATP-binding protein - none -
fig|6666666.65905.peg.268 CDS gi|522808891|gb|ATVG01000013.1| 52243 53025 1 + 783 ABC-type transport system, permease component - none -
fig|6666666.65905.peg.269 CDS gi|522808891|gb|ATVG01000013.1| 53183 53034 -2 - 150 hypothetical protein - none -
fig|6666666.65905.peg.270 CDS gi|522808891|gb|ATVG01000013.1| 53166 54062 3 + 897 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65905.peg.271 CDS gi|522808891|gb|ATVG01000013.1| 54871 54080 -1 - 792 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) - none -
fig|6666666.65905.peg.272 CDS gi|522808891|gb|ATVG01000013.1| 55700 54864 -2 - 837 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65905.peg.273 CDS gi|522808891|gb|ATVG01000013.1| 55864 56961 1 + 1098 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65905.peg.274 CDS gi|522808891|gb|ATVG01000013.1| 58643 56985 -2 - 1659 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65905.peg.275 CDS gi|522808891|gb|ATVG01000013.1| 58835 59524 2 + 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65905.peg.276 CDS gi|522808891|gb|ATVG01000013.1| 59524 60426 1 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65905.peg.277 CDS gi|522808891|gb|ATVG01000013.1| 60449 60958 2 + 510 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65905.peg.278 CDS gi|522808891|gb|ATVG01000013.1| 60984 61337 3 + 354 FIG016027: protein of unknown function YeaO - none -
fig|6666666.65905.peg.279 CDS gi|522808891|gb|ATVG01000013.1| 62001 63650 3 + 1650 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65905.peg.280 CDS gi|522808891|gb|ATVG01000013.1| 63651 65021 3 + 1371 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65905.peg.281 CDS gi|522808891|gb|ATVG01000013.1| 65144 66196 2 + 1053 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.65905.peg.282 CDS gi|522808891|gb|ATVG01000013.1| 66239 67183 2 + 945 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.65905.peg.283 CDS gi|522808891|gb|ATVG01000013.1| 67344 68225 3 + 882 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.65905.peg.284 CDS gi|522808891|gb|ATVG01000013.1| 68222 68977 2 + 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.65905.peg.285 CDS gi|522808893|gb|ATVG01000012.1| 73 237 1 + 165 hypothetical protein - none -
fig|6666666.65905.peg.286 CDS gi|522808893|gb|ATVG01000012.1| 1430 522 -2 - 909 putative secreted protein - none -
fig|6666666.65905.peg.287 CDS gi|522808893|gb|ATVG01000012.1| 1485 1955 3 + 471 Transamidase GatB domain protein - none -
fig|6666666.65905.peg.288 CDS gi|522808893|gb|ATVG01000012.1| 4451 2001 -2 - 2451 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65905.peg.289 CDS gi|522808893|gb|ATVG01000012.1| 4691 5029 2 + 339 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65905.peg.290 CDS gi|522808893|gb|ATVG01000012.1| 5081 5236 2 + 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65905.peg.291 CDS gi|522808893|gb|ATVG01000012.1| 5264 5695 2 + 432 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65905.peg.292 CDS gi|522808893|gb|ATVG01000012.1| 5768 6529 2 + 762 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65905.peg.293 CDS gi|522808893|gb|ATVG01000012.1| 7308 6625 -3 - 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65905.peg.294 CDS gi|522808893|gb|ATVG01000012.1| 7622 8287 2 + 666 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65905.peg.295 CDS gi|522808893|gb|ATVG01000012.1| 8330 8950 2 + 621 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.65905.peg.296 CDS gi|522808893|gb|ATVG01000012.1| 8994 9695 3 + 702 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65905.peg.297 CDS gi|522808893|gb|ATVG01000012.1| 9742 10911 1 + 1170 putative serine protease - none -
fig|6666666.65905.peg.298 CDS gi|522808893|gb|ATVG01000012.1| 11860 10943 -1 - 918 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.65905.peg.299 CDS gi|522808893|gb|ATVG01000012.1| 12477 11974 -3 - 504 FIG00544230: hypothetical protein - none -
fig|6666666.65905.peg.300 CDS gi|522808893|gb|ATVG01000012.1| 12586 13308 1 + 723 FIG00544328: hypothetical protein - none -
fig|6666666.65905.peg.301 CDS gi|522808893|gb|ATVG01000012.1| 14203 13319 -1 - 885 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65905.peg.302 CDS gi|522808893|gb|ATVG01000012.1| 14491 15801 1 + 1311 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.65905.peg.303 CDS gi|522808893|gb|ATVG01000012.1| 15798 16967 3 + 1170 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.65905.peg.304 CDS gi|522808893|gb|ATVG01000012.1| 17120 17812 2 + 693 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.65905.peg.305 CDS gi|522808893|gb|ATVG01000012.1| 17927 18430 2 + 504 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.65905.peg.306 CDS gi|522808893|gb|ATVG01000012.1| 18482 18679 2 + 198 FIG043778: hypothetical protein CBSS-336982.3.peg.3874
fig|6666666.65905.peg.307 CDS gi|522808893|gb|ATVG01000012.1| 18743 19084 2 + 342 FIG00544831: hypothetical protein - none -
fig|6666666.65905.peg.308 CDS gi|522808893|gb|ATVG01000012.1| 19081 19434 1 + 354 hypothetical protein - none -
fig|6666666.65905.peg.309 CDS gi|522808893|gb|ATVG01000012.1| 21955 19469 -1 - 2487 FIG00545284: hypothetical protein - none -
fig|6666666.65905.peg.310 CDS gi|522808893|gb|ATVG01000012.1| 22251 22439 3 + 189 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65905.peg.311 CDS gi|522808893|gb|ATVG01000012.1| 23078 22449 -2 - 630 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65905.peg.312 CDS gi|522808893|gb|ATVG01000012.1| 23369 26374 2 + 3006 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65905.peg.313 CDS gi|522808893|gb|ATVG01000012.1| 27601 26396 -1 - 1206 10 TMS hypothetical membrane protein - none -
fig|6666666.65905.peg.314 CDS gi|522808893|gb|ATVG01000012.1| 29316 27817 -3 - 1500 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65905.peg.315 CDS gi|522808893|gb|ATVG01000012.1| 29426 30682 2 + 1257 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65905.peg.316 CDS gi|522808893|gb|ATVG01000012.1| 31942 33081 1 + 1140 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.65905.peg.317 CDS gi|522808893|gb|ATVG01000012.1| 33085 33705 1 + 621 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.65905.peg.318 CDS gi|522808893|gb|ATVG01000012.1| 35081 33774 -2 - 1308 hypothetical protein - none -
fig|6666666.65905.peg.319 CDS gi|522808893|gb|ATVG01000012.1| 35931 35047 -3 - 885 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65905.peg.320 CDS gi|522808893|gb|ATVG01000012.1| 37612 35951 -1 - 1662 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.321 CDS gi|522808893|gb|ATVG01000012.1| 38664 37615 -3 - 1050 ABC-type transporter, permease component - none -
fig|6666666.65905.peg.322 CDS gi|522808893|gb|ATVG01000012.1| 39583 38657 -1 - 927 ABC-type transporter, permease component - none -
fig|6666666.65905.peg.323 CDS gi|522808893|gb|ATVG01000012.1| 41131 39596 -1 - 1536 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65905.peg.324 CDS gi|522808893|gb|ATVG01000012.1| 42773 41370 -2 - 1404 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.65905.peg.325 CDS gi|522808893|gb|ATVG01000012.1| 43788 42784 -3 - 1005 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65905.peg.326 CDS gi|522808893|gb|ATVG01000012.1| 45206 43821 -2 - 1386 aminopeptidase N - none -
fig|6666666.65905.peg.327 CDS gi|522808893|gb|ATVG01000012.1| 46441 45284 -1 - 1158 FIG00544202: hypothetical protein - none -
fig|6666666.65905.peg.328 CDS gi|522808893|gb|ATVG01000012.1| 46760 46891 2 + 132 hypothetical protein - none -
fig|6666666.65905.peg.329 CDS gi|522808893|gb|ATVG01000012.1| 46941 48353 3 + 1413 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65905.peg.330 CDS gi|522808893|gb|ATVG01000012.1| 48515 49423 2 + 909 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.331 CDS gi|522808893|gb|ATVG01000012.1| 49712 50467 2 + 756 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65905.peg.332 CDS gi|522808893|gb|ATVG01000012.1| 50498 52513 2 + 2016 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65905.peg.333 CDS gi|522808893|gb|ATVG01000012.1| 52513 53262 1 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65905.peg.334 CDS gi|522808893|gb|ATVG01000012.1| 53323 53811 1 + 489 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.65905.peg.335 CDS gi|522808893|gb|ATVG01000012.1| 53946 55223 3 + 1278 FIG00544632: hypothetical protein - none -
fig|6666666.65905.peg.336 CDS gi|522808893|gb|ATVG01000012.1| 55243 55638 1 + 396 hypothetical protein - none -
fig|6666666.65905.peg.337 CDS gi|522808893|gb|ATVG01000012.1| 55640 55963 2 + 324 hypothetical protein - none -
fig|6666666.65905.peg.338 CDS gi|522808893|gb|ATVG01000012.1| 55976 56632 2 + 657 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65905.peg.339 CDS gi|522808893|gb|ATVG01000012.1| 57428 56673 -2 - 756 hypothetical protein - none -
fig|6666666.65905.peg.340 CDS gi|522808893|gb|ATVG01000012.1| 57992 57498 -2 - 495 FIG00546961: hypothetical protein - none -
fig|6666666.65905.peg.341 CDS gi|522808893|gb|ATVG01000012.1| 58008 59144 3 + 1137 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65905.peg.342 CDS gi|522808893|gb|ATVG01000012.1| 59692 59216 -1 - 477 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.343 CDS gi|522808893|gb|ATVG01000012.1| 61441 59720 -1 - 1722 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65905.peg.344 CDS gi|522808893|gb|ATVG01000012.1| 61533 62840 3 + 1308 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65905.peg.345 CDS gi|522808893|gb|ATVG01000012.1| 62851 63591 1 + 741 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65905.peg.346 CDS gi|522808893|gb|ATVG01000012.1| 63626 64834 2 + 1209 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65905.peg.347 CDS gi|522808893|gb|ATVG01000012.1| 64831 65529 1 + 699 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65905.peg.348 CDS gi|522808893|gb|ATVG01000012.1| 66452 65544 -2 - 909 FIG00543972: hypothetical protein - none -
fig|6666666.65905.peg.349 CDS gi|522808893|gb|ATVG01000012.1| 66543 67451 3 + 909 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65905.peg.350 CDS gi|522808893|gb|ATVG01000012.1| 67462 68382 1 + 921 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.65905.peg.351 CDS gi|522808893|gb|ATVG01000012.1| 68466 69263 3 + 798 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65905.peg.352 CDS gi|522808893|gb|ATVG01000012.1| 69539 69730 2 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65905.peg.353 CDS gi|522808893|gb|ATVG01000012.1| 69977 70165 2 + 189 hypothetical protein - none -
fig|6666666.65905.peg.354 CDS gi|522808893|gb|ATVG01000012.1| 70535 70317 -2 - 219 Mobile element protein - none -
fig|6666666.65905.peg.355 CDS gi|522808895|gb|ATVG01000011.1| 1283 1747 2 + 465 hypothetical protein - none -
fig|6666666.65905.peg.356 CDS gi|522808895|gb|ATVG01000011.1| 2661 1744 -3 - 918 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65905.peg.357 CDS gi|522808895|gb|ATVG01000011.1| 2717 2863 2 + 147 hypothetical protein - none -
fig|6666666.65905.peg.358 CDS gi|522808895|gb|ATVG01000011.1| 2935 3828 1 + 894 Universal stress protein family - none -
fig|6666666.65905.peg.359 CDS gi|522808895|gb|ATVG01000011.1| 4028 4339 2 + 312 hypothetical protein - none -
fig|6666666.65905.peg.360 CDS gi|522808895|gb|ATVG01000011.1| 4631 5239 2 + 609 Transcriptional regulator, TetR family - none -
fig|6666666.65905.peg.361 CDS gi|522808895|gb|ATVG01000011.1| 6781 5660 -1 - 1122 No significant database matches - none -
fig|6666666.65905.peg.362 CDS gi|522808895|gb|ATVG01000011.1| 8387 7131 -2 - 1257 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.65905.peg.363 CDS gi|522808895|gb|ATVG01000011.1| 8458 9654 1 + 1197 Hemoglobin-dependent two component system, sensory histidine kinase HrrS - none -
fig|6666666.65905.peg.364 CDS gi|522808895|gb|ATVG01000011.1| 9706 10344 1 + 639 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65905.peg.365 CDS gi|522808895|gb|ATVG01000011.1| 10676 10341 -2 - 336 hypothetical protein - none -
fig|6666666.65905.peg.366 CDS gi|522808895|gb|ATVG01000011.1| 11552 10914 -2 - 639 FIG071084: hypothetical protein - none -
fig|6666666.65905.peg.367 CDS gi|522808895|gb|ATVG01000011.1| 11585 13159 2 + 1575 FIG00544355: hypothetical protein - none -
fig|6666666.65905.peg.368 CDS gi|522808895|gb|ATVG01000011.1| 14441 13131 -2 - 1311 FIG00544207: hypothetical protein - none -
fig|6666666.65905.peg.369 CDS gi|522808895|gb|ATVG01000011.1| 15151 14546 -1 - 606 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65905.peg.370 CDS gi|522808895|gb|ATVG01000011.1| 15302 15952 2 + 651 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65905.peg.371 CDS gi|522808895|gb|ATVG01000011.1| 17711 15954 -2 - 1758 Predicted membrane protein (DUF2319) - none -
fig|6666666.65905.peg.372 CDS gi|522808895|gb|ATVG01000011.1| 17891 18598 2 + 708 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) - none -
fig|6666666.65905.peg.373 CDS gi|522808895|gb|ATVG01000011.1| 18620 19543 2 + 924 FIG00544431: hypothetical protein - none -
fig|6666666.65905.peg.374 CDS gi|522808895|gb|ATVG01000011.1| 20901 19627 -3 - 1275 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65905.peg.375 CDS gi|522808895|gb|ATVG01000011.1| 21867 21163 -3 - 705 Putative conserved integral membrane protein - none -
fig|6666666.65905.peg.376 CDS gi|522808895|gb|ATVG01000011.1| 22988 21864 -2 - 1125 putative amidase - none -
fig|6666666.65905.peg.377 CDS gi|522808895|gb|ATVG01000011.1| 23349 23002 -3 - 348 FIG00544953: hypothetical protein - none -
fig|6666666.65905.peg.378 CDS gi|522808895|gb|ATVG01000011.1| 24421 23336 -1 - 1086 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65905.peg.379 CDS gi|522808895|gb|ATVG01000011.1| 24484 25740 1 + 1257 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65905.peg.380 CDS gi|522808895|gb|ATVG01000011.1| 25744 26595 1 + 852 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) - none -
fig|6666666.65905.peg.381 CDS gi|522808895|gb|ATVG01000011.1| 26608 27438 1 + 831 Putative uncharacterized protein BCG_3875c - none -
fig|6666666.65905.peg.382 CDS gi|522808895|gb|ATVG01000011.1| 31260 29116 -3 - 2145 hypothetical protein - none -
fig|6666666.65905.peg.383 CDS gi|522808895|gb|ATVG01000011.1| 32211 31261 -3 - 951 FIG00549203: hypothetical protein - none -
fig|6666666.65905.peg.384 CDS gi|522808895|gb|ATVG01000011.1| 32306 33244 2 + 939 FIG00547591: hypothetical protein - none -
fig|6666666.65905.peg.385 CDS gi|522808895|gb|ATVG01000011.1| 33245 34282 2 + 1038 Glycosyl transferase, group 1 - none -
fig|6666666.65905.peg.386 CDS gi|522808895|gb|ATVG01000011.1| 34282 35280 1 + 999 hypothetical protein - none -
fig|6666666.65905.peg.387 CDS gi|522808895|gb|ATVG01000011.1| 35280 36110 3 + 831 hypothetical protein - none -
fig|6666666.65905.peg.388 CDS gi|522808895|gb|ATVG01000011.1| 36103 36852 1 + 750 Glycosyl transferase, group 2 family protein - none -
fig|6666666.65905.peg.389 CDS gi|522808895|gb|ATVG01000011.1| 38928 36859 -3 - 2070 FIG00544841: hypothetical protein - none -
fig|6666666.65905.peg.390 CDS gi|522808895|gb|ATVG01000011.1| 39227 40432 2 + 1206 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65905.peg.391 CDS gi|522808895|gb|ATVG01000011.1| 41127 41729 3 + 603 FIG00544357: hypothetical protein - none -
fig|6666666.65905.peg.392 CDS gi|522808895|gb|ATVG01000011.1| 42501 41911 -3 - 591 hypothetical protein - none -
fig|6666666.65905.peg.393 CDS gi|522808895|gb|ATVG01000011.1| 43889 42594 -2 - 1296 hypothetical protein - none -
fig|6666666.65905.peg.394 CDS gi|522808895|gb|ATVG01000011.1| 43899 44033 3 + 135 hypothetical protein - none -
fig|6666666.65905.peg.395 CDS gi|522808895|gb|ATVG01000011.1| 44243 46198 2 + 1956 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65905.peg.396 CDS gi|522808895|gb|ATVG01000011.1| 46203 46718 3 + 516 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65905.peg.397 CDS gi|522808895|gb|ATVG01000011.1| 46715 47779 2 + 1065 putative membrane protein - none -
fig|6666666.65905.peg.398 CDS gi|522808895|gb|ATVG01000011.1| 47812 49563 1 + 1752 hypothetical protein Rv3805c - none -
fig|6666666.65905.peg.399 CDS gi|522808895|gb|ATVG01000011.1| 49724 50749 2 + 1026 putative esterase - none -
fig|6666666.65905.peg.400 CDS gi|522808895|gb|ATVG01000011.1| 51033 52994 3 + 1962 putative esterase - none -
fig|6666666.65905.peg.401 CDS gi|522808895|gb|ATVG01000011.1| 53121 53600 3 + 480 hypothetical protein - none -
fig|6666666.65905.peg.402 CDS gi|522808895|gb|ATVG01000011.1| 53656 54594 1 + 939 hypothetical protein Rv3802c - none -
fig|6666666.65905.peg.403 CDS gi|522808895|gb|ATVG01000011.1| 54707 56539 2 + 1833 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65905.peg.404 CDS gi|522808895|gb|ATVG01000011.1| 56623 61419 1 + 4797 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65905.peg.405 CDS gi|522808895|gb|ATVG01000011.1| 61391 62938 2 + 1548 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65905.peg.406 CDS gi|522808895|gb|ATVG01000011.1| 63478 63122 -1 - 357 FIG00544939: hypothetical protein - none -
fig|6666666.65905.peg.407 CDS gi|522808895|gb|ATVG01000011.1| 64515 63475 -3 - 1041 conserved hypothetical protein 374 - none -
fig|6666666.65905.peg.408 CDS gi|522808895|gb|ATVG01000011.1| 66740 64518 -2 - 2223 putative integral membrane protein - none -
fig|6666666.65905.peg.409 CDS gi|522808895|gb|ATVG01000011.1| 67352 66759 -2 - 594 FIG00546304: hypothetical protein - none -
fig|6666666.65905.peg.410 CDS gi|522808895|gb|ATVG01000011.1| 68111 67353 -2 - 759 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.65905.peg.411 CDS gi|522808895|gb|ATVG01000011.1| 68400 70229 3 + 1830 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65905.peg.412 CDS gi|522808896|gb|ATVG01000010.1| 1566 514 -3 - 1053 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65905.peg.413 CDS gi|522808896|gb|ATVG01000010.1| 1717 1881 1 + 165 Glutaredoxin-like domain protein - none -
fig|6666666.65905.peg.414 CDS gi|522808896|gb|ATVG01000010.1| 1979 3352 2 + 1374 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.415 CDS gi|522808896|gb|ATVG01000010.1| 3353 4246 2 + 894 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.416 CDS gi|522808896|gb|ATVG01000010.1| 4493 6391 2 + 1899 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.417 CDS gi|522808896|gb|ATVG01000010.1| 6476 7465 2 + 990 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.418 CDS gi|522808896|gb|ATVG01000010.1| 7535 8245 2 + 711 hypothetical membrane protein - none -
fig|6666666.65905.peg.419 CDS gi|522808896|gb|ATVG01000010.1| 8233 8772 1 + 540 hypothetical protein - none -
fig|6666666.65905.peg.420 CDS gi|522808896|gb|ATVG01000010.1| 8881 9858 1 + 978 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.421 CDS gi|522808896|gb|ATVG01000010.1| 9859 11310 1 + 1452 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.422 CDS gi|522808896|gb|ATVG01000010.1| 12116 11307 -2 - 810 putative dehydrogenase - none -
fig|6666666.65905.peg.423 CDS gi|522808896|gb|ATVG01000010.1| 12179 13498 2 + 1320 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.424 CDS gi|522808896|gb|ATVG01000010.1| 14301 13495 -3 - 807 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.65905.peg.425 CDS gi|522808896|gb|ATVG01000010.1| 15128 14298 -2 - 831 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.65905.peg.426 CDS gi|522808896|gb|ATVG01000010.1| 15846 15121 -3 - 726 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.65905.peg.427 CDS gi|522808896|gb|ATVG01000010.1| 16814 15843 -2 - 972 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65905.peg.428 CDS gi|522808896|gb|ATVG01000010.1| 16969 17637 1 + 669 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.65905.peg.429 CDS gi|522808896|gb|ATVG01000010.1| 17675 18283 2 + 609 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.65905.peg.430 CDS gi|522808896|gb|ATVG01000010.1| 18291 18932 3 + 642 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65905.peg.431 CDS gi|522808896|gb|ATVG01000010.1| 18939 19742 3 + 804 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65905.peg.432 CDS gi|522808896|gb|ATVG01000010.1| 19834 21432 1 + 1599 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65905.peg.433 CDS gi|522808896|gb|ATVG01000010.1| 21554 22579 2 + 1026 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65905.peg.434 CDS gi|522808896|gb|ATVG01000010.1| 22591 22845 1 + 255 FIG00545941: hypothetical protein - none -
fig|6666666.65905.peg.435 CDS gi|522808896|gb|ATVG01000010.1| 23178 22846 -3 - 333 hypothetical protein - none -
fig|6666666.65905.peg.436 CDS gi|522808896|gb|ATVG01000010.1| 23218 23583 1 + 366 hypothetical protein - none -
fig|6666666.65905.peg.437 CDS gi|522808896|gb|ATVG01000010.1| 24551 23622 -2 - 930 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65905.peg.438 CDS gi|522808896|gb|ATVG01000010.1| 25093 24632 -1 - 462 hypothetical protein - none -
fig|6666666.65905.peg.439 CDS gi|522808896|gb|ATVG01000010.1| 25210 26136 1 + 927 Aldo-keto reductase - none -
fig|6666666.65905.peg.440 CDS gi|522808896|gb|ATVG01000010.1| 27276 26137 -3 - 1140 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65905.peg.441 CDS gi|522808896|gb|ATVG01000010.1| 27742 27308 -1 - 435 hypothetical protein - none -
fig|6666666.65905.peg.442 CDS gi|522808896|gb|ATVG01000010.1| 28832 27804 -2 - 1029 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65905.peg.443 CDS gi|522808896|gb|ATVG01000010.1| 28890 29750 3 + 861 Probable secreted protein - none -
fig|6666666.65905.peg.444 CDS gi|522808896|gb|ATVG01000010.1| 29762 30781 2 + 1020 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65905.peg.445 CDS gi|522808896|gb|ATVG01000010.1| 31421 30798 -2 - 624 hypothetical protein - none -
fig|6666666.65905.peg.446 CDS gi|522808896|gb|ATVG01000010.1| 32030 34516 2 + 2487 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65905.peg.447 CDS gi|522808896|gb|ATVG01000010.1| 34883 35287 2 + 405 hypothetical protein - none -
fig|6666666.65905.peg.448 CDS gi|522808896|gb|ATVG01000010.1| 35299 36990 1 + 1692 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65905.peg.449 CDS gi|522808896|gb|ATVG01000010.1| 36993 37496 3 + 504 FIG00543979: hypothetical protein - none -
fig|6666666.65905.peg.450 CDS gi|522808896|gb|ATVG01000010.1| 37556 38764 2 + 1209 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65905.peg.451 CDS gi|522808896|gb|ATVG01000010.1| 38772 39524 3 + 753 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65905.peg.452 CDS gi|522808896|gb|ATVG01000010.1| 40756 39521 -1 - 1236 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65905.peg.453 CDS gi|522808896|gb|ATVG01000010.1| 40930 41904 1 + 975 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.65905.peg.454 CDS gi|522808896|gb|ATVG01000010.1| 42938 43273 2 + 336 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65905.peg.455 CDS gi|522808896|gb|ATVG01000010.1| 43432 44436 1 + 1005 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65905.peg.456 CDS gi|522808896|gb|ATVG01000010.1| 44672 45109 2 + 438 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65905.peg.457 CDS gi|522808896|gb|ATVG01000010.1| 45217 45921 1 + 705 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65905.peg.458 CDS gi|522808896|gb|ATVG01000010.1| 46032 47582 3 + 1551 Aldehyde dehydrogenase (EC 1.2.1.3) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65905.peg.459 CDS gi|522808896|gb|ATVG01000010.1| 47621 49153 2 + 1533 Phytoene dehydrogenase and related proteins - none -
fig|6666666.65905.peg.460 CDS gi|522808896|gb|ATVG01000010.1| 50629 49193 -1 - 1437 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase;
EC699-706
fig|6666666.65905.peg.461 CDS gi|522808896|gb|ATVG01000010.1| 50982 51503 3 + 522 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65905.peg.462 CDS gi|522808896|gb|ATVG01000010.1| 51585 51974 3 + 390 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65905.peg.463 CDS gi|522808896|gb|ATVG01000010.1| 52069 53466 1 + 1398 hypothetical protein - none -
fig|6666666.65905.peg.464 CDS gi|522808896|gb|ATVG01000010.1| 53712 57230 3 + 3519 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65905.peg.465 CDS gi|522808896|gb|ATVG01000010.1| 57317 61315 2 + 3999 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65905.peg.466 CDS gi|522808896|gb|ATVG01000010.1| 61403 62809 2 + 1407 ATPase - none -
fig|6666666.65905.peg.467 CDS gi|522808896|gb|ATVG01000010.1| 62821 63195 1 + 375 Inner membrane protein - none -
fig|6666666.65905.peg.468 CDS gi|522808896|gb|ATVG01000010.1| 63192 63563 3 + 372 hypothetical membrane protein - none -
fig|6666666.65905.peg.469 CDS gi|522808896|gb|ATVG01000010.1| 63700 64290 1 + 591 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65905.peg.470 CDS gi|522808896|gb|ATVG01000010.1| 64344 65738 3 + 1395 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.65905.peg.471 CDS gi|522808896|gb|ATVG01000010.1| 65735 66514 2 + 780 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65905.peg.472 CDS gi|522808896|gb|ATVG01000010.1| 66511 67041 1 + 531 hypothetical protein - none -
fig|6666666.65905.peg.473 CDS gi|522808896|gb|ATVG01000010.1| 67034 67483 2 + 450 hypothetical protein - none -
fig|6666666.65905.peg.474 CDS gi|522808896|gb|ATVG01000010.1| 67807 68178 1 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65905.peg.475 CDS gi|522808896|gb|ATVG01000010.1| 68182 68649 1 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65905.peg.476 CDS gi|522808896|gb|ATVG01000010.1| 69110 71239 2 + 2130 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65905.peg.477 CDS gi|522808896|gb|ATVG01000010.1| 71663 71442 -2 - 222 hypothetical protein - none -
fig|6666666.65905.peg.478 CDS gi|522808896|gb|ATVG01000010.1| 71628 72818 3 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65905.peg.479 CDS gi|522808896|gb|ATVG01000010.1| 72968 73723 2 + 756 hypothetical protein - none -
fig|6666666.65905.peg.480 CDS gi|522808896|gb|ATVG01000010.1| 74299 73733 -1 - 567 hypothetical protein - none -
fig|6666666.65905.peg.481 CDS gi|522808896|gb|ATVG01000010.1| 74852 74292 -2 - 561 hypothetical protein - none -
fig|6666666.65905.peg.482 CDS gi|522808896|gb|ATVG01000010.1| 76065 74845 -3 - 1221 hypothetical protein - none -
fig|6666666.65905.peg.483 CDS gi|522808896|gb|ATVG01000010.1| 76358 76164 -2 - 195 hypothetical protein - none -
fig|6666666.65905.peg.484 CDS gi|522808896|gb|ATVG01000010.1| 76853 76503 -2 - 351 hypothetical protein - none -
fig|6666666.65905.peg.485 CDS gi|522808896|gb|ATVG01000010.1| 77387 76860 -2 - 528 Alkaline shock protein 23 - none -
fig|6666666.65905.peg.486 CDS gi|522808896|gb|ATVG01000010.1| 78188 78493 2 + 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.65905.peg.487 CDS gi|522808896|gb|ATVG01000010.1| 78526 79182 1 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65905.peg.488 CDS gi|522808896|gb|ATVG01000010.1| 79179 79838 3 + 660 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65905.peg.489 CDS gi|522808896|gb|ATVG01000010.1| 79831 80133 1 + 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65905.peg.490 CDS gi|522808896|gb|ATVG01000010.1| 80163 80999 3 + 837 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65905.peg.491 CDS gi|522808896|gb|ATVG01000010.1| 81013 81291 1 + 279 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.65905.peg.492 CDS gi|522808896|gb|ATVG01000010.1| 81295 81657 1 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65905.peg.493 CDS gi|522808896|gb|ATVG01000010.1| 81657 82403 3 + 747 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.65905.peg.494 CDS gi|522808896|gb|ATVG01000010.1| 82406 82822 2 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65905.peg.495 CDS gi|522808896|gb|ATVG01000010.1| 82822 83052 1 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65905.peg.496 CDS gi|522808896|gb|ATVG01000010.1| 83055 83351 3 + 297 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.65905.peg.497 CDS gi|522808896|gb|ATVG01000010.1| 83523 84284 3 + 762 hypothetical protein - none -
fig|6666666.65905.peg.498 CDS gi|522808897|gb|ATVG01000009.1| 1039 665 -1 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.65905.peg.499 CDS gi|522808897|gb|ATVG01000009.1| 1245 2645 3 + 1401 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65905.peg.500 CDS gi|522808897|gb|ATVG01000009.1| 3577 2693 -1 - 885 FIG00544174: hypothetical protein - none -
fig|6666666.65905.peg.501 CDS gi|522808897|gb|ATVG01000009.1| 4000 3602 -1 - 399 Thioredoxin - none -
fig|6666666.65905.peg.502 CDS gi|522808897|gb|ATVG01000009.1| 4151 4023 -2 - 129 hypothetical protein - none -
fig|6666666.65905.peg.503 CDS gi|522808897|gb|ATVG01000009.1| 4155 4358 3 + 204 Copper chaperone Copper homeostasis
fig|6666666.65905.peg.504 CDS gi|522808897|gb|ATVG01000009.1| 4362 6608 3 + 2247 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65905.peg.505 CDS gi|522808897|gb|ATVG01000009.1| 8081 6642 -2 - 1440 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65905.peg.506 CDS gi|522808897|gb|ATVG01000009.1| 9067 8615 -1 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65905.peg.507 CDS gi|522808897|gb|ATVG01000009.1| 9699 9121 -3 - 579 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65905.peg.508 CDS gi|522808897|gb|ATVG01000009.1| 10057 9767 -1 - 291 SSU ribosomal protein S6p - none -
fig|6666666.65905.peg.509 CDS gi|522808897|gb|ATVG01000009.1| 11759 10260 -2 - 1500 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65905.peg.510 CDS gi|522808897|gb|ATVG01000009.1| 14097 11770 -3 - 2328 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65905.peg.511 CDS gi|522808897|gb|ATVG01000009.1| 14571 14191 -3 - 381 hypothetical protein - none -
fig|6666666.65905.peg.512 CDS gi|522808897|gb|ATVG01000009.1| 14681 15190 2 + 510 Transcriptional regulator, MarR family - none -
fig|6666666.65905.peg.513 CDS gi|522808897|gb|ATVG01000009.1| 15354 16184 3 + 831 Universal stress protein family - none -
fig|6666666.65905.peg.514 CDS gi|522808897|gb|ATVG01000009.1| 16181 16642 2 + 462 hypothetical membrane protein - none -
fig|6666666.65905.peg.515 CDS gi|522808897|gb|ATVG01000009.1| 16662 18149 3 + 1488 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65905.peg.516 CDS gi|522808897|gb|ATVG01000009.1| 19060 18146 -1 - 915 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65905.peg.517 CDS gi|522808897|gb|ATVG01000009.1| 20575 19079 -1 - 1497 ATP-dependent Zn protease - none -
fig|6666666.65905.peg.518 CDS gi|522808897|gb|ATVG01000009.1| 20648 21448 2 + 801 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65905.peg.519 CDS gi|522808897|gb|ATVG01000009.1| 21467 21670 2 + 204 hypothetical protein - none -
fig|6666666.65905.peg.520 CDS gi|522808897|gb|ATVG01000009.1| 22014 22943 3 + 930 hypothetical protein - none -
fig|6666666.65905.peg.521 CDS gi|522808897|gb|ATVG01000009.1| 23637 22963 -3 - 675 ABC transport system ATP-binding protein - none -
fig|6666666.65905.peg.522 CDS gi|522808897|gb|ATVG01000009.1| 24682 23639 -1 - 1044 FIG00545752: hypothetical protein - none -
fig|6666666.65905.peg.523 CDS gi|522808897|gb|ATVG01000009.1| 24794 25987 2 + 1194 Sensor histidine kinase - none -
fig|6666666.65905.peg.524 CDS gi|522808897|gb|ATVG01000009.1| 25995 26567 3 + 573 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65905.peg.525 CDS gi|522808897|gb|ATVG01000009.1| 26564 27535 2 + 972 monooxygenase, putative - none -
fig|6666666.65905.peg.526 CDS gi|522808897|gb|ATVG01000009.1| 27873 27517 -3 - 357 hypothetical protein - none -
fig|6666666.65905.peg.527 CDS gi|522808897|gb|ATVG01000009.1| 28477 27941 -1 - 537 Transcriptional regulator, TetR family - none -
fig|6666666.65905.peg.528 CDS gi|522808897|gb|ATVG01000009.1| 28635 29678 3 + 1044 putative membrane protein - none -
fig|6666666.65905.peg.529 CDS gi|522808897|gb|ATVG01000009.1| 30143 29682 -2 - 462 Conserved integral membrane protein - none -
fig|6666666.65905.peg.530 CDS gi|522808897|gb|ATVG01000009.1| 30249 30995 3 + 747 hypothetical protein - none -
fig|6666666.65905.peg.531 CDS gi|522808897|gb|ATVG01000009.1| 31094 32074 2 + 981 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid
fig|6666666.65905.peg.532 CDS gi|522808897|gb|ATVG01000009.1| 32479 32177 -1 - 303 hypothetical protein - none -
fig|6666666.65905.peg.533 CDS gi|522808897|gb|ATVG01000009.1| 32661 33917 3 + 1257 hypothetical protein - none -
fig|6666666.65905.peg.534 CDS gi|522808897|gb|ATVG01000009.1| 34039 33914 -1 - 126 hypothetical protein - none -
fig|6666666.65905.peg.535 CDS gi|522808897|gb|ATVG01000009.1| 34117 35469 1 + 1353 hypothetical protein - none -
fig|6666666.65905.peg.536 CDS gi|522808897|gb|ATVG01000009.1| 38382 35548 -3 - 2835 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65905.peg.537 CDS gi|522808897|gb|ATVG01000009.1| 38551 39126 1 + 576 hypothetical protein - none -
fig|6666666.65905.peg.538 CDS gi|522808897|gb|ATVG01000009.1| 40826 39123 -2 - 1704 Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) Dihydroxyacetone kinases
fig|6666666.65905.peg.539 CDS gi|522808897|gb|ATVG01000009.1| 41815 40943 -1 - 873 hypothetical protein - none -
fig|6666666.65905.peg.540 CDS gi|522808897|gb|ATVG01000009.1| 42101 42514 2 + 414 Uncharacterized protein conserved in bacteria - none -
fig|6666666.65905.peg.541 CDS gi|522808897|gb|ATVG01000009.1| 43701 42580 -3 - 1122 hypothetical protein - none -
fig|6666666.65905.peg.542 CDS gi|522808897|gb|ATVG01000009.1| 43793 45430 2 + 1638 Fumarate/succinate/L-aspartate dehydrogenases - none -
fig|6666666.65905.peg.543 CDS gi|522808897|gb|ATVG01000009.1| 45585 46907 3 + 1323 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65905.peg.544 CDS gi|522808897|gb|ATVG01000009.1| 48217 47042 -1 - 1176 putative transmembrane symporter - none -
fig|6666666.65905.peg.545 CDS gi|522808897|gb|ATVG01000009.1| 48402 48869 3 + 468 putative tryptophan transpoter - none -
fig|6666666.65905.peg.546 CDS gi|522808897|gb|ATVG01000009.1| 49425 50417 3 + 993 Sodium - Bile acid symporter - none -
fig|6666666.65905.peg.547 CDS gi|522808897|gb|ATVG01000009.1| 50459 50752 2 + 294 No significant database matches - none -
fig|6666666.65905.peg.548 CDS gi|522808897|gb|ATVG01000009.1| 51063 50749 -3 - 315 hypothetical membrane protein - none -
fig|6666666.65905.peg.549 CDS gi|522808897|gb|ATVG01000009.1| 51498 51142 -3 - 357 branched-chain amino acid transport protein - none -
fig|6666666.65905.peg.550 CDS gi|522808897|gb|ATVG01000009.1| 52402 51803 -1 - 600 Putative transcriptional regulator - none -
fig|6666666.65905.peg.551 CDS gi|522808897|gb|ATVG01000009.1| 53748 52399 -3 - 1350 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65905.peg.552 CDS gi|522808897|gb|ATVG01000009.1| 54100 53984 -1 - 117 hypothetical protein - none -
fig|6666666.65905.peg.553 CDS gi|522808897|gb|ATVG01000009.1| 54206 54724 2 + 519 MutT/nudix family protein - none -
fig|6666666.65905.peg.554 CDS gi|522808897|gb|ATVG01000009.1| 54826 57246 1 + 2421 probable secreted protein. - none -
fig|6666666.65905.peg.555 CDS gi|522808897|gb|ATVG01000009.1| 57254 60703 2 + 3450 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65905.peg.556 CDS gi|522808897|gb|ATVG01000009.1| 61102 63633 1 + 2532 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65905.peg.557 CDS gi|522808897|gb|ATVG01000009.1| 63951 64556 3 + 606 putative RNA polymerase sigma factor - none -
fig|6666666.65905.peg.558 CDS gi|522808897|gb|ATVG01000009.1| 64664 65590 2 + 927 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65905.peg.559 CDS gi|522808897|gb|ATVG01000009.1| 65614 65925 1 + 312 Thioredoxin - none -
fig|6666666.65905.peg.560 CDS gi|522808897|gb|ATVG01000009.1| 65971 67152 1 + 1182 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.65905.peg.561 CDS gi|522808897|gb|ATVG01000009.1| 68321 67224 -2 - 1098 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65905.peg.562 CDS gi|522808897|gb|ATVG01000009.1| 69185 68322 -2 - 864 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65905.peg.563 CDS gi|522808897|gb|ATVG01000009.1| 69795 69187 -3 - 609 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.65905.peg.564 CDS gi|522808897|gb|ATVG01000009.1| 70785 69796 -3 - 990 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.65905.peg.565 CDS gi|522808897|gb|ATVG01000009.1| 70738 70872 1 + 135 hypothetical protein - none -
fig|6666666.65905.peg.566 CDS gi|522808897|gb|ATVG01000009.1| 71212 71060 -1 - 153 hypothetical protein - none -
fig|6666666.65905.peg.567 CDS gi|522808897|gb|ATVG01000009.1| 71610 71467 -3 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.65905.peg.568 CDS gi|522808897|gb|ATVG01000009.1| 72279 73964 3 + 1686 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65905.peg.569 CDS gi|522808897|gb|ATVG01000009.1| 74546 75736 2 + 1191 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65905.peg.570 CDS gi|522808897|gb|ATVG01000009.1| 75753 76919 3 + 1167 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65905.peg.571 CDS gi|522808897|gb|ATVG01000009.1| 76922 77542 2 + 621 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65905.peg.572 CDS gi|522808897|gb|ATVG01000009.1| 77708 79642 2 + 1935 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65905.peg.573 CDS gi|522808897|gb|ATVG01000009.1| 79760 80767 2 + 1008 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) - none -
fig|6666666.65905.peg.574 CDS gi|522808897|gb|ATVG01000009.1| 80764 81810 1 + 1047 ABC transporter substrate-binding protein - none -
fig|6666666.65905.peg.575 CDS gi|522808897|gb|ATVG01000009.1| 81818 83548 2 + 1731 Ferric iron ABC transporter, permease protein - none -
fig|6666666.65905.peg.576 CDS gi|522808897|gb|ATVG01000009.1| 84212 84718 2 + 507 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65905.peg.577 CDS gi|522808897|gb|ATVG01000009.1| 85630 84692 -1 - 939 hypothetical protein - none -
fig|6666666.65905.peg.578 CDS gi|522808897|gb|ATVG01000009.1| 86428 86216 -1 - 213 Prevent host death protein, Phd antitoxin - none -
fig|6666666.65905.peg.579 CDS gi|522808897|gb|ATVG01000009.1| 86526 89072 3 + 2547 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65905.peg.580 CDS gi|522808897|gb|ATVG01000009.1| 89076 89414 3 + 339 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65905.peg.581 CDS gi|522808897|gb|ATVG01000009.1| 89990 89772 -2 - 219 Mobile element protein - none -
fig|6666666.65905.peg.582 CDS gi|522808901|gb|ATVG01000008.1| 572 1552 2 + 981 FIG00997919: hypothetical protein - none -
fig|6666666.65905.peg.583 CDS gi|522808901|gb|ATVG01000008.1| 1927 3330 1 + 1404 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65905.peg.584 CDS gi|522808901|gb|ATVG01000008.1| 3517 4119 1 + 603 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65905.peg.585 CDS gi|522808901|gb|ATVG01000008.1| 4143 4766 3 + 624 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65905.peg.586 CDS gi|522808901|gb|ATVG01000008.1| 5630 4860 -2 - 771 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.65905.peg.587 CDS gi|522808901|gb|ATVG01000008.1| 5761 7251 1 + 1491 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.65905.peg.588 CDS gi|522808901|gb|ATVG01000008.1| 7312 8619 1 + 1308 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65905.peg.589 CDS gi|522808901|gb|ATVG01000008.1| 9475 8663 -1 - 813 Transcriptional regulator, TetR family - none -
fig|6666666.65905.peg.590 CDS gi|522808901|gb|ATVG01000008.1| 9630 12362 3 + 2733 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65905.peg.591 CDS gi|522808901|gb|ATVG01000008.1| 12359 13909 2 + 1551 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65905.peg.592 CDS gi|522808901|gb|ATVG01000008.1| 14029 14394 1 + 366 Putative membrane protein - none -
fig|6666666.65905.peg.593 CDS gi|522808901|gb|ATVG01000008.1| 16071 14539 -3 - 1533 hypothetical protein - none -
fig|6666666.65905.peg.594 CDS gi|522808901|gb|ATVG01000008.1| 16198 16377 1 + 180 hypothetical protein - none -
fig|6666666.65905.peg.595 CDS gi|522808901|gb|ATVG01000008.1| 16428 16838 3 + 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.65905.peg.596 CDS gi|522808901|gb|ATVG01000008.1| 17443 16907 -1 - 537 hypothetical protein - none -
fig|6666666.65905.peg.597 CDS gi|522808901|gb|ATVG01000008.1| 17937 21803 3 + 3867 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.65905.peg.598 CDS gi|522808901|gb|ATVG01000008.1| 22067 22372 2 + 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65905.peg.599 CDS gi|522808901|gb|ATVG01000008.1| 22417 22713 1 + 297 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65905.peg.600 CDS gi|522808901|gb|ATVG01000008.1| 22892 24424 2 + 1533 COG0536: GTP-binding protein Obg - none -
fig|6666666.65905.peg.601 CDS gi|522808901|gb|ATVG01000008.1| 24583 26247 1 + 1665 hypothetical protein - none -
fig|6666666.65905.peg.602 CDS gi|522808901|gb|ATVG01000008.1| 26364 27209 3 + 846 Sortase A, LPXTG specific Sortase
fig|6666666.65905.peg.603 CDS gi|522808901|gb|ATVG01000008.1| 27202 28110 1 + 909 Sortase A, LPXTG specific Sortase
fig|6666666.65905.peg.604 CDS gi|522808901|gb|ATVG01000008.1| 28251 29393 3 + 1143 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.65905.peg.605 CDS gi|522808901|gb|ATVG01000008.1| 29409 30347 3 + 939 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65905.peg.606 CDS gi|522808901|gb|ATVG01000008.1| 30397 31695 1 + 1299 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65905.peg.607 CDS gi|522808901|gb|ATVG01000008.1| 31737 32357 3 + 621 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65905.peg.608 CDS gi|522808901|gb|ATVG01000008.1| 32503 32976 1 + 474 Iojap protein - none -
fig|6666666.65905.peg.609 CDS gi|522808901|gb|ATVG01000008.1| 32984 33682 2 + 699 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.65905.peg.610 CDS gi|522808901|gb|ATVG01000008.1| 33682 34578 1 + 897 Hypothetical protein DUF194, DegV family - none -
fig|6666666.65905.peg.611 CDS gi|522808901|gb|ATVG01000008.1| 34731 35510 3 + 780 Competence protein - none -
fig|6666666.65905.peg.612 CDS gi|522808901|gb|ATVG01000008.1| 35552 37177 2 + 1626 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.65905.peg.613 CDS gi|522808901|gb|ATVG01000008.1| 37515 37174 -3 - 342 hypothetical protein - none -
fig|6666666.65905.peg.614 CDS gi|522808901|gb|ATVG01000008.1| 37734 38699 3 + 966 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65905.peg.615 CDS gi|522808901|gb|ATVG01000008.1| 38752 39396 1 + 645 L-lysine permease - none -
fig|6666666.65905.peg.616 CDS gi|522808901|gb|ATVG01000008.1| 40854 39469 -3 - 1386 Mu-like prophage protein gp29 - none -
fig|6666666.65905.peg.617 CDS gi|522808901|gb|ATVG01000008.1| 41677 40847 -1 - 831 DNA adenine methylase( EC:2.1.1.72 ) - none -
fig|6666666.65905.peg.618 CDS gi|522808901|gb|ATVG01000008.1| 42087 41824 -3 - 264 SSU ribosomal protein S20p - none -
fig|6666666.65905.peg.619 CDS gi|522808901|gb|ATVG01000008.1| 42453 43589 3 + 1137 No significant database matches - none -
fig|6666666.65905.peg.620 CDS gi|522808901|gb|ATVG01000008.1| 44266 43676 -1 - 591 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65905.peg.621 CDS gi|522808901|gb|ATVG01000008.1| 44379 46229 3 + 1851 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65905.peg.622 CDS gi|522808901|gb|ATVG01000008.1| 46398 47597 3 + 1200 hypothetical protein - none -
fig|6666666.65905.peg.623 CDS gi|522808901|gb|ATVG01000008.1| 47620 48435 1 + 816 two component transcriptional regulator, LuxR family - none -
fig|6666666.65905.peg.624 CDS gi|522808901|gb|ATVG01000008.1| 48598 50007 1 + 1410 hypothetical protein - none -
fig|6666666.65905.peg.625 CDS gi|522808901|gb|ATVG01000008.1| 50087 50251 2 + 165 hypothetical protein - none -
fig|6666666.65905.peg.626 CDS gi|522808901|gb|ATVG01000008.1| 51726 50254 -3 - 1473 putative ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.627 CDS gi|522808901|gb|ATVG01000008.1| 52565 51723 -2 - 843 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65905.peg.628 CDS gi|522808901|gb|ATVG01000008.1| 53521 52562 -1 - 960 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65905.peg.629 CDS gi|522808901|gb|ATVG01000008.1| 55028 53514 -2 - 1515 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65905.peg.630 CDS gi|522808901|gb|ATVG01000008.1| 55131 56849 3 + 1719 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.65905.peg.631 CDS gi|522808901|gb|ATVG01000008.1| 57847 56846 -1 - 1002 FIG00546389: hypothetical protein - none -
fig|6666666.65905.peg.632 CDS gi|522808901|gb|ATVG01000008.1| 59232 57940 -3 - 1293 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65905.peg.633 CDS gi|522808901|gb|ATVG01000008.1| 60527 59247 -2 - 1281 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65905.peg.634 CDS gi|522808901|gb|ATVG01000008.1| 61755 60610 -3 - 1146 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.65905.peg.635 CDS gi|522808901|gb|ATVG01000008.1| 63648 61765 -3 - 1884 putative ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.636 CDS gi|522808901|gb|ATVG01000008.1| 63719 64252 2 + 534 FIG00545146: hypothetical protein - none -
fig|6666666.65905.peg.637 CDS gi|522808901|gb|ATVG01000008.1| 64249 64776 1 + 528 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65905.peg.638 CDS gi|522808901|gb|ATVG01000008.1| 64800 64925 3 + 126 hypothetical protein - none -
fig|6666666.65905.peg.639 CDS gi|522808901|gb|ATVG01000008.1| 64918 65067 1 + 150 hypothetical protein - none -
fig|6666666.65905.peg.640 CDS gi|522808901|gb|ATVG01000008.1| 67045 65048 -1 - 1998 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65905.peg.641 CDS gi|522808901|gb|ATVG01000008.1| 67111 68946 1 + 1836 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65905.peg.642 CDS gi|522808901|gb|ATVG01000008.1| 69067 69753 1 + 687 FIG00543880: hypothetical protein - none -
fig|6666666.65905.peg.643 CDS gi|522808901|gb|ATVG01000008.1| 70672 69737 -1 - 936 hypothetical protein - none -
fig|6666666.65905.peg.644 CDS gi|522808901|gb|ATVG01000008.1| 71975 70920 -2 - 1056 Uncharacterized protein Rv1841c/MT1889 - none -
fig|6666666.65905.peg.645 CDS gi|522808901|gb|ATVG01000008.1| 73330 71975 -1 - 1356 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.65905.peg.646 CDS gi|522808901|gb|ATVG01000008.1| 73488 74612 3 + 1125 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65905.peg.647 CDS gi|522808901|gb|ATVG01000008.1| 74650 75678 1 + 1029 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65905.peg.648 CDS gi|522808901|gb|ATVG01000008.1| 75743 76888 2 + 1146 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65905.peg.649 CDS gi|522808901|gb|ATVG01000008.1| 76894 77634 1 + 741 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.65905.peg.650 CDS gi|522808901|gb|ATVG01000008.1| 77655 78593 3 + 939 Phosphate starvation-inducible protein PhoH, predicted ATPase Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.65905.peg.651 CDS gi|522808901|gb|ATVG01000008.1| 78590 79105 2 + 516 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65905.peg.652 CDS gi|522808901|gb|ATVG01000008.1| 80166 79102 -3 - 1065 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4) - none -
fig|6666666.65905.peg.653 CDS gi|522808901|gb|ATVG01000008.1| 80280 81125 3 + 846 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65905.peg.654 CDS gi|522808901|gb|ATVG01000008.1| 81146 82141 2 + 996 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65905.peg.655 CDS gi|522808901|gb|ATVG01000008.1| 82148 82891 2 + 744 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65905.peg.656 CDS gi|522808901|gb|ATVG01000008.1| 82931 83659 2 + 729 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65905.peg.657 CDS gi|522808901|gb|ATVG01000008.1| 83660 84742 2 + 1083 FIG00544679: hypothetical protein - none -
fig|6666666.65905.peg.658 CDS gi|522808901|gb|ATVG01000008.1| 85157 84732 -2 - 426 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.65905.peg.659 CDS gi|522808901|gb|ATVG01000008.1| 85295 86674 2 + 1380 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65905.peg.660 CDS gi|522808901|gb|ATVG01000008.1| 86686 87189 1 + 504 FIG00544046: hypothetical protein - none -
fig|6666666.65905.peg.661 CDS gi|522808901|gb|ATVG01000008.1| 87186 87620 3 + 435 hypothetical protein - none -
fig|6666666.65905.peg.662 CDS gi|522808901|gb|ATVG01000008.1| 89618 87621 -2 - 1998 FIG00543878: hypothetical protein - none -
fig|6666666.65905.peg.663 CDS gi|522808901|gb|ATVG01000008.1| 89750 90382 2 + 633 EpiH/GdmH-related protein - none -
fig|6666666.65905.peg.664 CDS gi|522808901|gb|ATVG01000008.1| 90396 91688 3 + 1293 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65905.peg.665 CDS gi|522808901|gb|ATVG01000008.1| 91960 91685 -1 - 276 hypothetical protein - none -
fig|6666666.65905.peg.666 CDS gi|522808901|gb|ATVG01000008.1| 92422 91961 -1 - 462 putative ribonuclease - none -
fig|6666666.65905.peg.667 CDS gi|522808901|gb|ATVG01000008.1| 92523 94445 3 + 1923 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65905.peg.668 CDS gi|522808901|gb|ATVG01000008.1| 94736 94455 -2 - 282 FIG00546846: hypothetical protein - none -
fig|6666666.65905.peg.669 CDS gi|522808901|gb|ATVG01000008.1| 94909 95061 1 + 153 hypothetical protein - none -
fig|6666666.65905.peg.670 CDS gi|522808901|gb|ATVG01000008.1| 95159 96418 2 + 1260 putative phosphatase - none -
fig|6666666.65905.peg.671 CDS gi|522808901|gb|ATVG01000008.1| 97598 96447 -2 - 1152 hypothetical protein - none -
fig|6666666.65905.peg.672 CDS gi|522808901|gb|ATVG01000008.1| 97878 99590 3 + 1713 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65905.peg.673 CDS gi|522808901|gb|ATVG01000008.1| 100733 100518 -2 - 216 Mobile element protein - none -
fig|6666666.65905.peg.674 CDS gi|522808902|gb|ATVG01000007.1| 351 1802 3 + 1452 FIG00545027: hypothetical protein - none -
fig|6666666.65905.peg.675 CDS gi|522808902|gb|ATVG01000007.1| 2092 1799 -1 - 294 hypothetical protein - none -
fig|6666666.65905.peg.676 CDS gi|522808902|gb|ATVG01000007.1| 2649 2092 -3 - 558 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.65905.peg.677 CDS gi|522808902|gb|ATVG01000007.1| 3548 2658 -2 - 891 Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) Polysaccharide deacetylases
fig|6666666.65905.peg.678 CDS gi|522808902|gb|ATVG01000007.1| 3864 3661 -3 - 204 hypothetical protein - none -
fig|6666666.65905.peg.679 CDS gi|522808902|gb|ATVG01000007.1| 5092 4043 -1 - 1050 Putative membrane protein - none -
fig|6666666.65905.peg.680 CDS gi|522808902|gb|ATVG01000007.1| 5392 6390 1 + 999 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65905.peg.681 CDS gi|522808902|gb|ATVG01000007.1| 6447 8732 3 + 2286 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.65905.peg.682 CDS gi|522808902|gb|ATVG01000007.1| 8867 8739 -2 - 129 hypothetical protein - none -
fig|6666666.65905.peg.683 CDS gi|522808902|gb|ATVG01000007.1| 9238 10989 1 + 1752 hypothetical protein - none -
fig|6666666.65905.peg.684 CDS gi|522808902|gb|ATVG01000007.1| 11119 11955 1 + 837 sugar ABC transporter, permease protein - none -
fig|6666666.65905.peg.685 CDS gi|522808902|gb|ATVG01000007.1| 11968 12798 1 + 831 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) - none -
fig|6666666.65905.peg.686 CDS gi|522808902|gb|ATVG01000007.1| 12930 14135 3 + 1206 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) - none -
fig|6666666.65905.peg.687 CDS gi|522808902|gb|ATVG01000007.1| 14135 14818 2 + 684 conserved hypothetical protein - none -
fig|6666666.65905.peg.688 CDS gi|522808902|gb|ATVG01000007.1| 14862 15395 3 + 534 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.689 CDS gi|522808902|gb|ATVG01000007.1| 15488 16168 2 + 681 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.65905.peg.690 CDS gi|522808902|gb|ATVG01000007.1| 17162 16452 -2 - 711 conserved hypothetical protein - none -
fig|6666666.65905.peg.691 CDS gi|522808902|gb|ATVG01000007.1| 17546 17274 -2 - 273 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65905.peg.692 CDS gi|522808902|gb|ATVG01000007.1| 19660 17570 -1 - 2091 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65905.peg.693 CDS gi|522808902|gb|ATVG01000007.1| 21336 19660 -3 - 1677 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65905.peg.694 CDS gi|522808902|gb|ATVG01000007.1| 22770 21337 -3 - 1434 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65905.peg.695 CDS gi|522808902|gb|ATVG01000007.1| 24081 22774 -3 - 1308 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65905.peg.696 CDS gi|522808902|gb|ATVG01000007.1| 25713 24085 -3 - 1629 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65905.peg.697 CDS gi|522808902|gb|ATVG01000007.1| 26186 25710 -2 - 477 FIG00818182: hypothetical protein - none -
fig|6666666.65905.peg.698 CDS gi|522808902|gb|ATVG01000007.1| 27081 26197 -3 - 885 FIG00543872: hypothetical protein - none -
fig|6666666.65905.peg.699 CDS gi|522808902|gb|ATVG01000007.1| 27608 28066 2 + 459 hypothetical protein - none -
fig|6666666.65905.peg.700 CDS gi|522808902|gb|ATVG01000007.1| 28070 28258 2 + 189 Transcriptional regulator, Cro/CI family - none -
fig|6666666.65905.peg.701 CDS gi|522808902|gb|ATVG01000007.1| 28514 29506 2 + 993 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65905.peg.702 CDS gi|522808902|gb|ATVG01000007.1| 29493 32252 3 + 2760 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.703 CDS gi|522808902|gb|ATVG01000007.1| 32838 33074 3 + 237 hypothetical protein - none -
fig|6666666.65905.peg.704 CDS gi|522808902|gb|ATVG01000007.1| 33447 33094 -3 - 354 hypothetical protein - none -
fig|6666666.65905.peg.705 CDS gi|522808902|gb|ATVG01000007.1| 33878 35050 2 + 1173 No significant database matches - none -
fig|6666666.65905.peg.706 CDS gi|522808902|gb|ATVG01000007.1| 36201 35164 -3 - 1038 Lantibiotic ABC transporter - none -
fig|6666666.65905.peg.707 CDS gi|522808902|gb|ATVG01000007.1| 36893 36198 -2 - 696 ABC transport system ATP-binding protein - none -
fig|6666666.65905.peg.708 CDS gi|522808902|gb|ATVG01000007.1| 37630 36965 -1 - 666 DNA-binding response regulator, LuxR family - none -
fig|6666666.65905.peg.709 CDS gi|522808902|gb|ATVG01000007.1| 38763 37633 -3 - 1131 Putative two-component system sensor kinase - none -
fig|6666666.65905.peg.710 CDS gi|522808902|gb|ATVG01000007.1| 38845 39228 1 + 384 hypothetical protein - none -
fig|6666666.65905.peg.711 CDS gi|522808902|gb|ATVG01000007.1| 39232 40089 1 + 858 FIG00546046: hypothetical protein - none -
fig|6666666.65905.peg.712 CDS gi|522808902|gb|ATVG01000007.1| 40095 42071 3 + 1977 hypothetical protein - none -
fig|6666666.65905.peg.713 CDS gi|522808902|gb|ATVG01000007.1| 42151 43266 1 + 1116 Putative membrane protein - none -
fig|6666666.65905.peg.714 CDS gi|522808902|gb|ATVG01000007.1| 43263 44333 3 + 1071 hypothetical protein - none -
fig|6666666.65905.peg.715 CDS gi|522808902|gb|ATVG01000007.1| 46168 44330 -1 - 1839 Phospholipase C - none -
fig|6666666.65905.peg.716 CDS gi|522808902|gb|ATVG01000007.1| 46350 47882 3 + 1533 phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65905.peg.717 CDS gi|522808902|gb|ATVG01000007.1| 47904 48776 3 + 873 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.65905.peg.718 CDS gi|522808902|gb|ATVG01000007.1| 50122 48773 -1 - 1350 FIG016551: Putative peptidase - none -
fig|6666666.65905.peg.719 CDS gi|522808902|gb|ATVG01000007.1| 50215 51243 1 + 1029 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65905.peg.720 CDS gi|522808902|gb|ATVG01000007.1| 51260 51445 2 + 186 hypothetical protein - none -
fig|6666666.65905.peg.721 CDS gi|522808902|gb|ATVG01000007.1| 51656 53080 2 + 1425 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.65905.peg.722 CDS gi|522808902|gb|ATVG01000007.1| 53187 53672 3 + 486 ferritin - none -
fig|6666666.65905.peg.723 CDS gi|522808902|gb|ATVG01000007.1| 55241 54099 -2 - 1143 FIG00544490: hypothetical protein - none -
fig|6666666.65905.peg.724 CDS gi|522808902|gb|ATVG01000007.1| 55340 55921 2 + 582 Lysine decarboxylase family - none -
fig|6666666.65905.peg.725 CDS gi|522808902|gb|ATVG01000007.1| 55946 57607 2 + 1662 FIG00544558: hypothetical protein - none -
fig|6666666.65905.peg.726 CDS gi|522808902|gb|ATVG01000007.1| 58666 57611 -1 - 1056 FIG00545643: hypothetical protein - none -
fig|6666666.65905.peg.727 CDS gi|522808902|gb|ATVG01000007.1| 58741 59511 1 + 771 FIG00545045: hypothetical protein - none -
fig|6666666.65905.peg.728 CDS gi|522808902|gb|ATVG01000007.1| 61846 59513 -1 - 2334 ATP-dependent helicase HrpB - none -
fig|6666666.65905.peg.729 CDS gi|522808902|gb|ATVG01000007.1| 61895 62569 2 + 675 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.65905.peg.730 CDS gi|522808902|gb|ATVG01000007.1| 62585 63331 2 + 747 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65905.peg.731 CDS gi|522808902|gb|ATVG01000007.1| 64924 63341 -1 - 1584 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.65905.peg.732 CDS gi|522808902|gb|ATVG01000007.1| 67103 64962 -2 - 2142 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.65905.peg.733 CDS gi|522808902|gb|ATVG01000007.1| 67294 69069 1 + 1776 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.65905.peg.734 CDS gi|522808902|gb|ATVG01000007.1| 69249 69917 3 + 669 L-lysine permease - none -
fig|6666666.65905.peg.735 CDS gi|522808902|gb|ATVG01000007.1| 69973 70302 1 + 330 FIG00547592: hypothetical protein - none -
fig|6666666.65905.peg.736 CDS gi|522808902|gb|ATVG01000007.1| 70335 70628 3 + 294 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65905.peg.737 CDS gi|522808902|gb|ATVG01000007.1| 70628 71398 2 + 771 lactoylglutathione lyase-like protein - none -
fig|6666666.65905.peg.738 CDS gi|522808902|gb|ATVG01000007.1| 72162 71395 -3 - 768 2-pyrone-4,6-dicarboxylic acid hydrolase, putative - none -
fig|6666666.65905.peg.739 CDS gi|522808902|gb|ATVG01000007.1| 72213 74159 3 + 1947 putative endopeptidase - none -
fig|6666666.65905.peg.740 CDS gi|522808902|gb|ATVG01000007.1| 74171 74950 2 + 780 FIG00544069: hypothetical protein - none -
fig|6666666.65905.peg.741 CDS gi|522808902|gb|ATVG01000007.1| 74957 76210 2 + 1254 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.65905.peg.742 CDS gi|522808902|gb|ATVG01000007.1| 79520 76188 -2 - 3333 putative arabinosyltransferase - none -
fig|6666666.65905.peg.743 CDS gi|522808902|gb|ATVG01000007.1| 79845 80057 3 + 213 hypothetical protein - none -
fig|6666666.65905.peg.744 CDS gi|522808902|gb|ATVG01000007.1| 80784 81152 3 + 369 CONSERVED 13E12 REPEAT FAMILY PROTEIN - none -
fig|6666666.65905.peg.745 CDS gi|522808902|gb|ATVG01000007.1| 82969 81149 -1 - 1821 putative membrane protein - none -
fig|6666666.65905.peg.746 CDS gi|522808902|gb|ATVG01000007.1| 83832 83074 -3 - 759 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.65905.peg.747 CDS gi|522808902|gb|ATVG01000007.1| 85270 83855 -1 - 1416 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65905.peg.748 CDS gi|522808902|gb|ATVG01000007.1| 85675 85388 -1 - 288 FIG00543901: hypothetical protein - none -
fig|6666666.65905.peg.749 CDS gi|522808902|gb|ATVG01000007.1| 85688 86650 2 + 963 FIG00545361: hypothetical protein - none -
fig|6666666.65905.peg.750 CDS gi|522808902|gb|ATVG01000007.1| 86682 87092 3 + 411 FIG00544442: hypothetical protein - none -
fig|6666666.65905.peg.751 CDS gi|522808902|gb|ATVG01000007.1| 87108 87605 3 + 498 hypothetical protein - none -
fig|6666666.65905.peg.752 CDS gi|522808902|gb|ATVG01000007.1| 89131 87602 -1 - 1530 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65905.peg.753 CDS gi|522808902|gb|ATVG01000007.1| 89099 89434 2 + 336 hypothetical protein - none -
fig|6666666.65905.peg.754 CDS gi|522808902|gb|ATVG01000007.1| 89561 89418 -2 - 144 hypothetical protein - none -
fig|6666666.65905.peg.755 CDS gi|522808902|gb|ATVG01000007.1| 90994 90083 -1 - 912 Putative glycosyl transferase - none -
fig|6666666.65905.peg.756 CDS gi|522808902|gb|ATVG01000007.1| 91799 90999 -2 - 801 O-antigen export system, ATP-binding protein - none -
fig|6666666.65905.peg.757 CDS gi|522808902|gb|ATVG01000007.1| 92714 91824 -2 - 891 O-antigen export system permease protein RfbD - none -
fig|6666666.65905.peg.758 CDS gi|522808902|gb|ATVG01000007.1| 92806 94050 1 + 1245 selenocysteine lyase - none -
fig|6666666.65905.peg.759 CDS gi|522808902|gb|ATVG01000007.1| 95084 94062 -2 - 1023 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65905.peg.760 CDS gi|522808902|gb|ATVG01000007.1| 96184 95198 -1 - 987 hypothetical protein - none -
fig|6666666.65905.peg.761 CDS gi|522808902|gb|ATVG01000007.1| 97367 96258 -2 - 1110 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65905.peg.762 CDS gi|522808902|gb|ATVG01000007.1| 97831 97364 -1 - 468 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65905.peg.763 CDS gi|522808902|gb|ATVG01000007.1| 98294 97821 -2 - 474 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65905.peg.764 CDS gi|522808902|gb|ATVG01000007.1| 99448 98297 -1 - 1152 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65905.peg.765 CDS gi|522808902|gb|ATVG01000007.1| 99475 99747 1 + 273 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65905.peg.766 CDS gi|522808902|gb|ATVG01000007.1| 100157 99744 -2 - 414 Integral membrane protein - none -
fig|6666666.65905.peg.767 CDS gi|522808902|gb|ATVG01000007.1| 100401 101765 3 + 1365 Mg/Co/Ni transporter MgtE Magnesium transport
fig|6666666.65905.peg.768 CDS gi|522808902|gb|ATVG01000007.1| 102203 102066 -2 - 138 hypothetical protein - none -
fig|6666666.65905.peg.769 CDS gi|522808903|gb|ATVG01000006.1| 59 223 2 + 165 Mobile element protein - none -
fig|6666666.65905.peg.770 CDS gi|522808903|gb|ATVG01000006.1| 633 965 3 + 333 FIG00544615: hypothetical protein - none -
fig|6666666.65905.peg.771 CDS gi|522808903|gb|ATVG01000006.1| 2947 1442 -1 - 1506 putative coenzyme A transferase - none -
fig|6666666.65905.peg.772 CDS gi|522808903|gb|ATVG01000006.1| 3093 4238 3 + 1146 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65905.peg.773 CDS gi|522808903|gb|ATVG01000006.1| 4262 4993 2 + 732 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65905.peg.774 CDS gi|522808903|gb|ATVG01000006.1| 5833 5060 -1 - 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65905.peg.775 CDS gi|522808903|gb|ATVG01000006.1| 6816 5890 -3 - 927 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65905.peg.776 CDS gi|522808903|gb|ATVG01000006.1| 7987 6836 -1 - 1152 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65905.peg.777 CDS gi|522808903|gb|ATVG01000006.1| 9324 8167 -3 - 1158 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65905.peg.778 CDS gi|522808903|gb|ATVG01000006.1| 10703 9627 -2 - 1077 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65905.peg.779 CDS gi|522808903|gb|ATVG01000006.1| 10788 11594 3 + 807 hypothetical protein - none -
fig|6666666.65905.peg.780 CDS gi|522808903|gb|ATVG01000006.1| 12636 11620 -3 - 1017 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.65905.peg.781 CDS gi|522808903|gb|ATVG01000006.1| 12702 13424 3 + 723 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65905.peg.782 CDS gi|522808903|gb|ATVG01000006.1| 13547 14584 2 + 1038 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65905.peg.783 CDS gi|522808903|gb|ATVG01000006.1| 14827 14985 1 + 159 hypothetical protein - none -
fig|6666666.65905.peg.784 CDS gi|522808903|gb|ATVG01000006.1| 16244 15114 -2 - 1131 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65905.peg.785 CDS gi|522808903|gb|ATVG01000006.1| 17786 16260 -2 - 1527 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65905.peg.786 CDS gi|522808903|gb|ATVG01000006.1| 18348 17956 -3 - 393 hypothetical protein - none -
fig|6666666.65905.peg.787 CDS gi|522808903|gb|ATVG01000006.1| 18456 19457 3 + 1002 acyl-CoA hydrolase - none -
fig|6666666.65905.peg.788 CDS gi|522808903|gb|ATVG01000006.1| 19485 19691 3 + 207 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65905.peg.789 CDS gi|522808903|gb|ATVG01000006.1| 19692 21245 3 + 1554 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65905.peg.790 CDS gi|522808903|gb|ATVG01000006.1| 21238 23220 1 + 1983 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65905.peg.791 CDS gi|522808903|gb|ATVG01000006.1| 23922 23239 -3 - 684 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.65905.peg.792 CDS gi|522808903|gb|ATVG01000006.1| 25011 23944 -3 - 1068 hypothetical protein - none -
fig|6666666.65905.peg.793 CDS gi|522808903|gb|ATVG01000006.1| 27337 25073 -1 - 2265 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65905.peg.794 CDS gi|522808903|gb|ATVG01000006.1| 28045 27350 -1 - 696 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65905.peg.795 CDS gi|522808903|gb|ATVG01000006.1| 28288 28046 -1 - 243 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65905.peg.796 CDS gi|522808903|gb|ATVG01000006.1| 28595 31612 2 + 3018 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.65905.peg.797 CDS gi|522808903|gb|ATVG01000006.1| 32295 31609 -3 - 687 FIG00546625: hypothetical protein - none -
fig|6666666.65905.peg.798 CDS gi|522808903|gb|ATVG01000006.1| 34443 32308 -3 - 2136 Protease II (EC 3.4.21.83) - none -
fig|6666666.65905.peg.799 CDS gi|522808903|gb|ATVG01000006.1| 35397 34513 -3 - 885 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65905.peg.800 CDS gi|522808903|gb|ATVG01000006.1| 36847 35411 -1 - 1437 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65905.peg.801 CDS gi|522808903|gb|ATVG01000006.1| 38225 36951 -2 - 1275 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65905.peg.802 CDS gi|522808903|gb|ATVG01000006.1| 38321 38749 2 + 429 HIT family protein - none -
fig|6666666.65905.peg.803 CDS gi|522808903|gb|ATVG01000006.1| 40212 38761 -3 - 1452 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.65905.peg.804 CDS gi|522808903|gb|ATVG01000006.1| 40972 40265 -1 - 708 two-component system, response regulator - none -
fig|6666666.65905.peg.805 CDS gi|522808903|gb|ATVG01000006.1| 42902 41166 -2 - 1737 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65905.peg.806 CDS gi|522808903|gb|ATVG01000006.1| 43224 44666 3 + 1443 FIG00544776: hypothetical protein - none -
fig|6666666.65905.peg.807 CDS gi|522808903|gb|ATVG01000006.1| 45037 44735 -1 - 303 hypothetical protein - none -
fig|6666666.65905.peg.808 CDS gi|522808903|gb|ATVG01000006.1| 45694 45431 -1 - 264 hypothetical membrane protein - none -
fig|6666666.65905.peg.809 CDS gi|522808903|gb|ATVG01000006.1| 47033 45699 -2 - 1335 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.65905.peg.810 CDS gi|522808903|gb|ATVG01000006.1| 47590 49491 1 + 1902 Putative amino acid export carrier protein - none -
fig|6666666.65905.peg.811 CDS gi|522808903|gb|ATVG01000006.1| 49577 49978 2 + 402 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65905.peg.812 CDS gi|522808903|gb|ATVG01000006.1| 49991 51472 2 + 1482 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.65905.peg.813 CDS gi|522808903|gb|ATVG01000006.1| 51462 52016 3 + 555 hypothetical protein - none -
fig|6666666.65905.peg.814 CDS gi|522808903|gb|ATVG01000006.1| 52057 52890 1 + 834 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65905.peg.815 CDS gi|522808903|gb|ATVG01000006.1| 52927 53880 1 + 954 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65905.peg.816 CDS gi|522808903|gb|ATVG01000006.1| 53880 54581 3 + 702 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65905.peg.817 CDS gi|522808903|gb|ATVG01000006.1| 54582 55550 3 + 969 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65905.peg.818 CDS gi|522808903|gb|ATVG01000006.1| 55569 56459 3 + 891 Bll1128 protein - none -
fig|6666666.65905.peg.819 CDS gi|522808903|gb|ATVG01000006.1| 57409 56465 -1 - 945 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.65905.peg.820 CDS gi|522808903|gb|ATVG01000006.1| 58972 57431 -1 - 1542 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.65905.peg.821 CDS gi|522808903|gb|ATVG01000006.1| 59803 59036 -1 - 768 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.65905.peg.822 CDS gi|522808903|gb|ATVG01000006.1| 61042 59834 -1 - 1209 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.65905.peg.823 CDS gi|522808903|gb|ATVG01000006.1| 63332 61107 -2 - 2226 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.65905.peg.824 CDS gi|522808903|gb|ATVG01000006.1| 63911 63390 -2 - 522 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65905.peg.825 CDS gi|522808903|gb|ATVG01000006.1| 64685 63927 -2 - 759 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65905.peg.826 CDS gi|522808903|gb|ATVG01000006.1| 65278 64694 -1 - 585 CarD-like transcriptional regulator - none -
fig|6666666.65905.peg.827 CDS gi|522808903|gb|ATVG01000006.1| 67279 65423 -1 - 1857 lipopolysaccharide modification acyltransferase - none -
fig|6666666.65905.peg.828 CDS gi|522808903|gb|ATVG01000006.1| 67611 68210 3 + 600 FIG00544037: hypothetical protein - none -
fig|6666666.65905.peg.829 CDS gi|522808903|gb|ATVG01000006.1| 68614 69807 1 + 1194 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65905.peg.830 CDS gi|522808903|gb|ATVG01000006.1| 70507 69851 -1 - 657 FIG00546701: hypothetical protein - none -
fig|6666666.65905.peg.831 CDS gi|522808903|gb|ATVG01000006.1| 71079 70510 -3 - 570 FIG00544365: hypothetical protein - none -
fig|6666666.65905.peg.832 CDS gi|522808903|gb|ATVG01000006.1| 72419 71127 -2 - 1293 FIG00545936: hypothetical protein - none -
fig|6666666.65905.peg.833 CDS gi|522808903|gb|ATVG01000006.1| 73189 72545 -1 - 645 hypothetical protein - none -
fig|6666666.65905.peg.834 CDS gi|522808903|gb|ATVG01000006.1| 74170 73544 -1 - 627 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.65905.peg.835 CDS gi|522808903|gb|ATVG01000006.1| 74220 75131 3 + 912 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65905.peg.836 CDS gi|522808903|gb|ATVG01000006.1| 76467 75151 -3 - 1317 FIG00545264: hypothetical protein - none -
fig|6666666.65905.peg.837 CDS gi|522808903|gb|ATVG01000006.1| 76665 76492 -3 - 174 FIG00543978: hypothetical protein - none -
fig|6666666.65905.peg.838 CDS gi|522808903|gb|ATVG01000006.1| 76727 78037 2 + 1311 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65905.peg.839 CDS gi|522808903|gb|ATVG01000006.1| 81261 78457 -3 - 2805 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65905.peg.840 CDS gi|522808903|gb|ATVG01000006.1| 81786 82649 3 + 864 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.65905.peg.841 CDS gi|522808903|gb|ATVG01000006.1| 82646 84337 2 + 1692 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.65905.peg.842 CDS gi|522808903|gb|ATVG01000006.1| 84430 85005 1 + 576 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR - none -
fig|6666666.65905.peg.843 CDS gi|522808903|gb|ATVG01000006.1| 85006 85941 1 + 936 Aspartate carbamoyltransferase (EC 2.1.3.2) - none -
fig|6666666.65905.peg.844 CDS gi|522808903|gb|ATVG01000006.1| 85971 87296 3 + 1326 Dihydroorotase (EC 3.5.2.3) - none -
fig|6666666.65905.peg.845 CDS gi|522808903|gb|ATVG01000006.1| 87599 89299 2 + 1701 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65905.peg.846 CDS gi|522808903|gb|ATVG01000006.1| 89913 90908 3 + 996 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65905.peg.847 CDS gi|522808903|gb|ATVG01000006.1| 91035 91976 3 + 942 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65905.peg.848 CDS gi|522808903|gb|ATVG01000006.1| 93869 92271 -2 - 1599 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65905.peg.849 CDS gi|522808903|gb|ATVG01000006.1| 94034 96148 2 + 2115 Putative phosphatase - none -
fig|6666666.65905.peg.850 CDS gi|522808903|gb|ATVG01000006.1| 96332 98074 2 + 1743 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.65905.peg.851 CDS gi|522808903|gb|ATVG01000006.1| 99388 98168 -1 - 1221 Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65905.peg.852 CDS gi|522808903|gb|ATVG01000006.1| 99577 100509 1 + 933 Glyoxalase family protein - none -
fig|6666666.65905.peg.853 CDS gi|522808903|gb|ATVG01000006.1| 101067 102440 3 + 1374 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65905.peg.854 CDS gi|522808903|gb|ATVG01000006.1| 102477 103724 3 + 1248 Arginine deiminase (EC 3.5.3.6) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65905.peg.855 CDS gi|522808904|gb|ATVG01000005.1| 1008 478 -3 - 531 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65905.peg.856 CDS gi|522808904|gb|ATVG01000005.1| 2661 1009 -3 - 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65905.peg.857 CDS gi|522808904|gb|ATVG01000005.1| 3570 2743 -3 - 828 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65905.peg.858 CDS gi|522808904|gb|ATVG01000005.1| 4286 3567 -2 - 720 Ketopantoate reductase PanG (EC 1.1.1.169) Coenzyme A Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65905.peg.859 CDS gi|522808904|gb|ATVG01000005.1| 4949 4287 -2 - 663 Putative membrane protein - none -
fig|6666666.65905.peg.860 CDS gi|522808904|gb|ATVG01000005.1| 6013 5606 -1 - 408 hypothetical protein - none -
fig|6666666.65905.peg.861 CDS gi|522808904|gb|ATVG01000005.1| 6600 6124 -3 - 477 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65905.peg.862 CDS gi|522808904|gb|ATVG01000005.1| 7142 6597 -2 - 546 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65905.peg.863 CDS gi|522808904|gb|ATVG01000005.1| 7636 7148 -1 - 489 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65905.peg.864 CDS gi|522808904|gb|ATVG01000005.1| 8534 7641 -2 - 894 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65905.peg.865 CDS gi|522808904|gb|ATVG01000005.1| 9155 8562 -2 - 594 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.866 CDS gi|522808904|gb|ATVG01000005.1| 11784 9148 -3 - 2637 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65905.peg.867 CDS gi|522808904|gb|ATVG01000005.1| 12384 11797 -3 - 588 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65905.peg.868 CDS gi|522808904|gb|ATVG01000005.1| 13325 12423 -2 - 903 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65905.peg.869 CDS gi|522808904|gb|ATVG01000005.1| 14691 13399 -3 - 1293 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65905.peg.870 CDS gi|522808904|gb|ATVG01000005.1| 14824 15351 1 + 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65905.peg.871 CDS gi|522808904|gb|ATVG01000005.1| 15608 18187 2 + 2580 Phage infection protein - none -
fig|6666666.65905.peg.872 CDS gi|522808904|gb|ATVG01000005.1| 18188 20368 2 + 2181 hypothetical protein - none -
fig|6666666.65905.peg.873 CDS gi|522808904|gb|ATVG01000005.1| 23212 21521 -1 - 1692 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65905.peg.874 CDS gi|522808904|gb|ATVG01000005.1| 26449 23222 -1 - 3228 bifunctional P-450:NADPH-P450 reductase 1 - none -
fig|6666666.65905.peg.875 CDS gi|522808904|gb|ATVG01000005.1| 26668 26534 -1 - 135 hypothetical protein - none -
fig|6666666.65905.peg.876 CDS gi|522808904|gb|ATVG01000005.1| 26885 26718 -2 - 168 hypothetical protein - none -
fig|6666666.65905.peg.877 CDS gi|522808904|gb|ATVG01000005.1| 28115 28435 2 + 321 Transcriptional regulator, MarR family - none -
fig|6666666.65905.peg.878 CDS gi|522808904|gb|ATVG01000005.1| 28525 32475 1 + 3951 putative non-ribosomal peptide synthetase - none -
fig|6666666.65905.peg.879 CDS gi|522808904|gb|ATVG01000005.1| 34099 33005 -1 - 1095 Arsenical-resistance protein ACR3 - none -
fig|6666666.65905.peg.880 CDS gi|522808904|gb|ATVG01000005.1| 34345 34521 1 + 177 Arsenical resistance operon repressor - none -
fig|6666666.65905.peg.881 CDS gi|522808904|gb|ATVG01000005.1| 36992 35310 -2 - 1683 putative phosphohydrolases, Icc family - none -
fig|6666666.65905.peg.882 CDS gi|522808904|gb|ATVG01000005.1| 38090 37212 -2 - 879 hypothetical protein - none -
fig|6666666.65905.peg.883 CDS gi|522808904|gb|ATVG01000005.1| 39161 38256 -2 - 906 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65905.peg.884 CDS gi|522808904|gb|ATVG01000005.1| 40117 39278 -1 - 840 Putative secreted hydrolase - none -
fig|6666666.65905.peg.885 CDS gi|522808904|gb|ATVG01000005.1| 40413 40213 -3 - 201 hypothetical protein - none -
fig|6666666.65905.peg.886 CDS gi|522808904|gb|ATVG01000005.1| 42548 40905 -2 - 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65905.peg.887 CDS gi|522808904|gb|ATVG01000005.1| 44258 42678 -2 - 1581 Probable conserved integral membrane protein - none -
fig|6666666.65905.peg.888 CDS gi|522808904|gb|ATVG01000005.1| 44439 45803 3 + 1365 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65905.peg.889 CDS gi|522808904|gb|ATVG01000005.1| 46199 49375 2 + 3177 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65905.peg.890 CDS gi|522808904|gb|ATVG01000005.1| 49386 49886 3 + 501 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65905.peg.891 CDS gi|522808904|gb|ATVG01000005.1| 49879 51579 1 + 1701 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65905.peg.892 CDS gi|522808904|gb|ATVG01000005.1| 51576 52109 3 + 534 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65905.peg.893 CDS gi|522808904|gb|ATVG01000005.1| 52110 52385 3 + 276 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65905.peg.894 CDS gi|522808904|gb|ATVG01000005.1| 52382 52762 2 + 381 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65905.peg.895 CDS gi|522808904|gb|ATVG01000005.1| 52997 54331 2 + 1335 Probable conserved integral membrane protein - none -
fig|6666666.65905.peg.896 CDS gi|522808904|gb|ATVG01000005.1| 55591 54443 -1 - 1149 Putative cytoplasmic protein - none -
fig|6666666.65905.peg.897 CDS gi|522808904|gb|ATVG01000005.1| 56677 55796 -1 - 882 FIG00544658: hypothetical protein - none -
fig|6666666.65905.peg.898 CDS gi|522808904|gb|ATVG01000005.1| 56925 56674 -3 - 252 hypothetical protein - none -
fig|6666666.65905.peg.899 CDS gi|522808904|gb|ATVG01000005.1| 56987 57586 2 + 600 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65905.peg.900 CDS gi|522808904|gb|ATVG01000005.1| 57597 58307 3 + 711 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65905.peg.901 CDS gi|522808904|gb|ATVG01000005.1| 58318 59127 1 + 810 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65905.peg.902 CDS gi|522808904|gb|ATVG01000005.1| 59153 60619 2 + 1467 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis
fig|6666666.65905.peg.903 CDS gi|522808904|gb|ATVG01000005.1| 61425 60664 -3 - 762 Putative ABC transport system membrane protein - none -
fig|6666666.65905.peg.904 CDS gi|522808904|gb|ATVG01000005.1| 62361 61426 -3 - 936 putative ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.905 CDS gi|522808904|gb|ATVG01000005.1| 62926 62384 -1 - 543 mutT3 - none -
fig|6666666.65905.peg.906 CDS gi|522808904|gb|ATVG01000005.1| 62982 64445 3 + 1464 FIG00543876: hypothetical protein - none -
fig|6666666.65905.peg.907 CDS gi|522808904|gb|ATVG01000005.1| 64445 65581 2 + 1137 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.65905.peg.908 CDS gi|522808904|gb|ATVG01000005.1| 65574 68012 3 + 2439 serine/threonine protein kinase - none -
fig|6666666.65905.peg.909 CDS gi|522808904|gb|ATVG01000005.1| 69236 68016 -2 - 1221 Acetate kinase (EC 2.7.2.1) Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65905.peg.910 CDS gi|522808904|gb|ATVG01000005.1| 70619 69243 -2 - 1377 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65905.peg.911 CDS gi|522808904|gb|ATVG01000005.1| 70848 72215 3 + 1368 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65905.peg.912 CDS gi|522808904|gb|ATVG01000005.1| 73547 72243 -2 - 1305 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.65905.peg.913 CDS gi|522808904|gb|ATVG01000005.1| 74085 73894 -3 - 192 hypothetical protein - none -
fig|6666666.65905.peg.914 CDS gi|522808904|gb|ATVG01000005.1| 74798 74649 -2 - 150 hypothetical protein - none -
fig|6666666.65905.peg.915 CDS gi|522808904|gb|ATVG01000005.1| 76184 74895 -2 - 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65905.peg.916 CDS gi|522808904|gb|ATVG01000005.1| 76278 77144 3 + 867 FIG00545467: hypothetical protein - none -
fig|6666666.65905.peg.917 CDS gi|522808904|gb|ATVG01000005.1| 78741 77446 -3 - 1296 FIG00545517: hypothetical protein - none -
fig|6666666.65905.peg.918 CDS gi|522808904|gb|ATVG01000005.1| 80295 78772 -3 - 1524 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65905.peg.919 CDS gi|522808904|gb|ATVG01000005.1| 81460 80426 -1 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65905.peg.920 CDS gi|522808904|gb|ATVG01000005.1| 82778 81567 -2 - 1212 fructose-bisphosphate aldolase family protein - none -
fig|6666666.65905.peg.921 CDS gi|522808904|gb|ATVG01000005.1| 83531 82833 -2 - 699 probable RNA methyltransferase - none -
fig|6666666.65905.peg.922 CDS gi|522808904|gb|ATVG01000005.1| 84108 83518 -3 - 591 Orotate phosphoribosyltransferase (EC 2.4.2.10) - none -
fig|6666666.65905.peg.923 CDS gi|522808904|gb|ATVG01000005.1| 85474 84191 -1 - 1284 Putative secreted protein - none -
fig|6666666.65905.peg.924 CDS gi|522808904|gb|ATVG01000005.1| 86368 85517 -1 - 852 Rhodanese-related sulfurtransferase - none -
fig|6666666.65905.peg.925 CDS gi|522808904|gb|ATVG01000005.1| 88981 86396 -1 - 2586 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65905.peg.926 CDS gi|522808904|gb|ATVG01000005.1| 90197 89286 -2 - 912 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65905.peg.927 CDS gi|522808904|gb|ATVG01000005.1| 90851 90198 -2 - 654 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65905.peg.928 CDS gi|522808904|gb|ATVG01000005.1| 91492 90848 -1 - 645 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65905.peg.929 CDS gi|522808904|gb|ATVG01000005.1| 92310 91489 -3 - 822 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65905.peg.930 CDS gi|522808904|gb|ATVG01000005.1| 93767 92379 -2 - 1389 FIG00545970: hypothetical protein - none -
fig|6666666.65905.peg.931 CDS gi|522808904|gb|ATVG01000005.1| 93948 95159 3 + 1212 flavohemoprotein - none -
fig|6666666.65905.peg.932 CDS gi|522808904|gb|ATVG01000005.1| 95331 96632 3 + 1302 hypothetical protein - none -
fig|6666666.65905.peg.933 CDS gi|522808904|gb|ATVG01000005.1| 98024 96999 -2 - 1026 hypothetical protein - none -
fig|6666666.65905.peg.934 CDS gi|522808904|gb|ATVG01000005.1| 98840 98073 -2 - 768 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65905.peg.935 CDS gi|522808904|gb|ATVG01000005.1| 98865 99962 3 + 1098 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65905.peg.936 CDS gi|522808904|gb|ATVG01000005.1| 102389 101346 -2 - 1044 hypothetical protein - none -
fig|6666666.65905.peg.937 CDS gi|522808904|gb|ATVG01000005.1| 102448 103527 1 + 1080 Lysophospholipid acyltransferase - none -
fig|6666666.65905.peg.938 CDS gi|522808904|gb|ATVG01000005.1| 103836 103666 -3 - 171 hypothetical protein - none -
fig|6666666.65905.peg.939 CDS gi|522808904|gb|ATVG01000005.1| 107782 104699 -1 - 3084 Conserved putative integral membrane protein - none -
fig|6666666.65905.peg.940 CDS gi|522808904|gb|ATVG01000005.1| 107995 107798 -1 - 198 FIG00543976: hypothetical protein - none -
fig|6666666.65905.peg.941 CDS gi|522808904|gb|ATVG01000005.1| 108512 108042 -2 - 471 FIG00545938: hypothetical protein - none -
fig|6666666.65905.peg.942 CDS gi|522808904|gb|ATVG01000005.1| 108559 109644 1 + 1086 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.65905.peg.943 CDS gi|522808904|gb|ATVG01000005.1| 109707 111446 3 + 1740 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65905.peg.944 CDS gi|522808904|gb|ATVG01000005.1| 111437 111559 2 + 123 hypothetical protein - none -
fig|6666666.65905.peg.945 CDS gi|522808904|gb|ATVG01000005.1| 111890 111771 -2 - 120 hypothetical protein - none -
fig|6666666.65905.peg.946 CDS gi|522808904|gb|ATVG01000005.1| 111947 112159 2 + 213 CONSERVED 13E12 REPEAT FAMILY PROTEIN - none -
fig|6666666.65905.peg.947 CDS gi|522808904|gb|ATVG01000005.1| 113192 112395 -2 - 798 FIG00545709: hypothetical protein - none -
fig|6666666.65905.peg.948 CDS gi|522808904|gb|ATVG01000005.1| 113301 113576 3 + 276 hypothetical protein - none -
fig|6666666.65905.peg.949 CDS gi|522808904|gb|ATVG01000005.1| 113578 114783 1 + 1206 hypothetical protein - none -
fig|6666666.65905.peg.950 CDS gi|522808904|gb|ATVG01000005.1| 115190 114780 -2 - 411 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65905.peg.951 CDS gi|522808904|gb|ATVG01000005.1| 116392 115205 -1 - 1188 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65905.peg.952 CDS gi|522808904|gb|ATVG01000005.1| 117183 116464 -3 - 720 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65905.peg.953 CDS gi|522808904|gb|ATVG01000005.1| 119040 117184 -3 - 1857 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65905.peg.954 CDS gi|522808904|gb|ATVG01000005.1| 119325 119206 -3 - 120 hypothetical protein - none -
fig|6666666.65905.peg.955 CDS gi|522808904|gb|ATVG01000005.1| 119827 123297 1 + 3471 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.65905.peg.956 CDS gi|522808904|gb|ATVG01000005.1| 123337 124689 1 + 1353 FIG00544912: hypothetical protein - none -
fig|6666666.65905.peg.957 CDS gi|522808904|gb|ATVG01000005.1| 125287 124700 -1 - 588 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.958 CDS gi|522808904|gb|ATVG01000005.1| 126580 125309 -1 - 1272 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65905.peg.959 CDS gi|522808904|gb|ATVG01000005.1| 127497 126580 -3 - 918 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65905.peg.960 CDS gi|522808904|gb|ATVG01000005.1| 128264 127479 -2 - 786 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation;
Inorganic Sulfur Assimilation
fig|6666666.65905.peg.961 CDS gi|522808904|gb|ATVG01000005.1| 128575 131862 1 + 3288 Fe-S oxidoreductase - none -
fig|6666666.65905.peg.962 CDS gi|522808904|gb|ATVG01000005.1| 131954 133156 2 + 1203 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) - none -
fig|6666666.65905.peg.963 CDS gi|522808904|gb|ATVG01000005.1| 133533 133153 -3 - 381 hypothetical protein - none -
fig|6666666.65905.peg.964 CDS gi|522808904|gb|ATVG01000005.1| 133686 134369 3 + 684 hypothetical protein - none -
fig|6666666.65905.peg.965 CDS gi|522808904|gb|ATVG01000005.1| 134387 135616 2 + 1230 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65905.peg.966 CDS gi|522808904|gb|ATVG01000005.1| 135644 137245 2 + 1602 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65905.peg.967 CDS gi|522808904|gb|ATVG01000005.1| 137347 138228 1 + 882 Putative secreted hydrolase - none -
fig|6666666.65905.peg.968 CDS gi|522808904|gb|ATVG01000005.1| 138278 139561 2 + 1284 FIG00547263: hypothetical protein - none -
fig|6666666.65905.peg.969 CDS gi|522808904|gb|ATVG01000005.1| 141429 140107 -3 - 1323 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65905.peg.970 CDS gi|522808904|gb|ATVG01000005.1| 142086 141523 -3 - 564 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) - none -
fig|6666666.65905.peg.971 CDS gi|522808904|gb|ATVG01000005.1| 142626 142408 -3 - 219 Mobile element protein - none -
fig|6666666.65905.peg.972 CDS gi|522808905|gb|ATVG01000004.1| 496 855 1 + 360 putative transcriptional regulator (ArsR family) - none -
fig|6666666.65905.peg.973 CDS gi|522808905|gb|ATVG01000004.1| 1113 2744 3 + 1632 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65905.peg.974 CDS gi|522808905|gb|ATVG01000004.1| 4108 3020 -1 - 1089 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65905.peg.975 CDS gi|522808905|gb|ATVG01000004.1| 4170 5552 3 + 1383 FIG00546199: hypothetical protein - none -
fig|6666666.65905.peg.976 CDS gi|522808905|gb|ATVG01000004.1| 5561 6619 2 + 1059 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.65905.peg.977 CDS gi|522808905|gb|ATVG01000004.1| 6677 7216 2 + 540 hypothetical membrane protein - none -
fig|6666666.65905.peg.978 CDS gi|522808905|gb|ATVG01000004.1| 8183 7224 -2 - 960 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65905.peg.979 CDS gi|522808905|gb|ATVG01000004.1| 8262 9503 3 + 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65905.peg.980 CDS gi|522808905|gb|ATVG01000004.1| 9543 9824 3 + 282 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65905.peg.981 CDS gi|522808905|gb|ATVG01000004.1| 9827 10180 2 + 354 hypothetical protein - none -
fig|6666666.65905.peg.982 CDS gi|522808905|gb|ATVG01000004.1| 10750 10184 -1 - 567 hypothetical protein - none -
fig|6666666.65905.peg.983 CDS gi|522808905|gb|ATVG01000004.1| 10849 11853 1 + 1005 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65905.peg.984 CDS gi|522808905|gb|ATVG01000004.1| 11934 13343 3 + 1410 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65905.peg.985 CDS gi|522808905|gb|ATVG01000004.1| 13472 14074 2 + 603 Transcriptional regulator, TetR family - none -
fig|6666666.65905.peg.986 CDS gi|522808905|gb|ATVG01000004.1| 14068 15657 1 + 1590 permease of the major facilitator superfamily - none -
fig|6666666.65905.peg.987 CDS gi|522808905|gb|ATVG01000004.1| 16209 15670 -3 - 540 sortase or related acyltransferase - none -
fig|6666666.65905.peg.988 CDS gi|522808905|gb|ATVG01000004.1| 17617 16220 -1 - 1398 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.65905.peg.989 CDS gi|522808905|gb|ATVG01000004.1| 18505 17822 -1 - 684 FIG00544545: hypothetical protein - none -
fig|6666666.65905.peg.990 CDS gi|522808905|gb|ATVG01000004.1| 19376 18648 -2 - 729 putative LysR-family transcriptional regulator - none -
fig|6666666.65905.peg.991 CDS gi|522808905|gb|ATVG01000004.1| 19380 19799 3 + 420 FIG00546727: hypothetical protein - none -
fig|6666666.65905.peg.992 CDS gi|522808905|gb|ATVG01000004.1| 20460 19762 -3 - 699 Aminodeoxychorismate lyase (EC 4.1.3.38) # PabAc Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.65905.peg.993 CDS gi|522808905|gb|ATVG01000004.1| 22346 20457 -2 - 1890 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65905.peg.994 CDS gi|522808905|gb|ATVG01000004.1| 23697 22396 -3 - 1302 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.65905.peg.995 CDS gi|522808905|gb|ATVG01000004.1| 23805 24746 3 + 942 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65905.peg.996 CDS gi|522808905|gb|ATVG01000004.1| 25526 24756 -2 - 771 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65905.peg.997 CDS gi|522808905|gb|ATVG01000004.1| 25871 25560 -2 - 312 FIG00543949: hypothetical protein - none -
fig|6666666.65905.peg.998 CDS gi|522808905|gb|ATVG01000004.1| 26768 25881 -2 - 888 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65905.peg.999 CDS gi|522808905|gb|ATVG01000004.1| 26887 27396 1 + 510 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65905.peg.1000 CDS gi|522808905|gb|ATVG01000004.1| 27564 28085 3 + 522 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65905.peg.1001 CDS gi|522808905|gb|ATVG01000004.1| 28137 28634 3 + 498 hypothetical protein - none -
fig|6666666.65905.peg.1002 CDS gi|522808905|gb|ATVG01000004.1| 30345 28738 -3 - 1608 Endoglucanase (EC 3.2.1.4) Mannose Metabolism
fig|6666666.65905.peg.1003 CDS gi|522808905|gb|ATVG01000004.1| 30469 30612 1 + 144 hypothetical protein - none -
fig|6666666.65905.peg.1004 CDS gi|522808905|gb|ATVG01000004.1| 32496 31675 -3 - 822 FIG00543890: hypothetical protein - none -
fig|6666666.65905.peg.1005 CDS gi|522808905|gb|ATVG01000004.1| 33537 32692 -3 - 846 Protocatechuate 3,4-dioxygenase beta subunit - none -
fig|6666666.65905.peg.1006 CDS gi|522808905|gb|ATVG01000004.1| 34978 34004 -1 - 975 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65905.peg.1007 CDS gi|522808905|gb|ATVG01000004.1| 35535 34975 -3 - 561 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65905.peg.1008 CDS gi|522808905|gb|ATVG01000004.1| 36224 35535 -2 - 690 Putative membrane protein - none -
fig|6666666.65905.peg.1009 CDS gi|522808905|gb|ATVG01000004.1| 37565 36288 -2 - 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.65905.peg.1010 CDS gi|522808905|gb|ATVG01000004.1| 38457 37672 -3 - 786 FIG00545464: hypothetical protein - none -
fig|6666666.65905.peg.1011 CDS gi|522808905|gb|ATVG01000004.1| 39164 38472 -2 - 693 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65905.peg.1012 CDS gi|522808905|gb|ATVG01000004.1| 39168 40718 3 + 1551 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.65905.peg.1013 CDS gi|522808905|gb|ATVG01000004.1| 40846 41682 1 + 837 Ferrous iron transport permease EfeU Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65905.peg.1014 CDS gi|522808905|gb|ATVG01000004.1| 41675 42838 2 + 1164 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65905.peg.1015 CDS gi|522808905|gb|ATVG01000004.1| 42838 44094 1 + 1257 Ferrous iron transport peroxidase EfeB Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.65905.peg.1016 CDS gi|522808905|gb|ATVG01000004.1| 47805 44101 -3 - 3705 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65905.peg.1017 CDS gi|522808905|gb|ATVG01000004.1| 48435 47806 -3 - 630 Transcriptional regulator, TetR family - none -
fig|6666666.65905.peg.1018 CDS gi|522808905|gb|ATVG01000004.1| 50465 48759 -2 - 1707 Multicopper oxidase Copper homeostasis
fig|6666666.65905.peg.1019 CDS gi|522808905|gb|ATVG01000004.1| 50670 51914 3 + 1245 Putative membrane protein - none -
fig|6666666.65905.peg.1020 CDS gi|522808905|gb|ATVG01000004.1| 52032 53555 3 + 1524 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65905.peg.1021 CDS gi|522808905|gb|ATVG01000004.1| 53613 54590 3 + 978 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.65905.peg.1022 CDS gi|522808905|gb|ATVG01000004.1| 54775 55551 1 + 777 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.65905.peg.1023 CDS gi|522808905|gb|ATVG01000004.1| 55643 56716 2 + 1074 hypothetical protein - none -
fig|6666666.65905.peg.1024 CDS gi|522808905|gb|ATVG01000004.1| 56924 57586 2 + 663 LSU ribosomal protein L25p Ribosome LSU bacterial
fig|6666666.65905.peg.1025 CDS gi|522808905|gb|ATVG01000004.1| 57835 59286 1 + 1452 hypothetical protein - none -
fig|6666666.65905.peg.1026 CDS gi|522808905|gb|ATVG01000004.1| 59633 60184 2 + 552 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.65905.peg.1027 CDS gi|522808905|gb|ATVG01000004.1| 60215 61117 2 + 903 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65905.peg.1028 CDS gi|522808905|gb|ATVG01000004.1| 61141 61971 1 + 831 FIG00546633: hypothetical protein - none -
fig|6666666.65905.peg.1029 CDS gi|522808905|gb|ATVG01000004.1| 63465 62020 -3 - 1446 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis
fig|6666666.65905.peg.1030 CDS gi|522808905|gb|ATVG01000004.1| 63619 65109 1 + 1491 hypothetical protein - none -
fig|6666666.65905.peg.1031 CDS gi|522808905|gb|ATVG01000004.1| 66219 65197 -3 - 1023 oxidoreductase - none -
fig|6666666.65905.peg.1032 CDS gi|522808905|gb|ATVG01000004.1| 66251 66880 2 + 630 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.65905.peg.1033 CDS gi|522808905|gb|ATVG01000004.1| 67420 66899 -1 - 522 putative reductase - none -
fig|6666666.65905.peg.1034 CDS gi|522808905|gb|ATVG01000004.1| 67516 69150 1 + 1635 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65905.peg.1035 CDS gi|522808905|gb|ATVG01000004.1| 70057 69188 -1 - 870 FIG00546451: hypothetical protein - none -
fig|6666666.65905.peg.1036 CDS gi|522808905|gb|ATVG01000004.1| 70237 70575 1 + 339 hypothetical protein - none -
fig|6666666.65905.peg.1037 CDS gi|522808905|gb|ATVG01000004.1| 71206 70550 -1 - 657 hypothetical membrane protein - none -
fig|6666666.65905.peg.1038 CDS gi|522808905|gb|ATVG01000004.1| 71378 74557 2 + 3180 FIG00545740: hypothetical protein - none -
fig|6666666.65905.peg.1039 CDS gi|522808905|gb|ATVG01000004.1| 74550 75143 3 + 594 Transcriptional regulator, TetR family - none -
fig|6666666.65905.peg.1040 CDS gi|522808905|gb|ATVG01000004.1| 76410 75175 -3 - 1236 Inner membrane protein YihY, formerly thought to be RNase BN CBSS-342610.3.peg.283;
LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.65905.peg.1041 CDS gi|522808905|gb|ATVG01000004.1| 78007 76454 -1 - 1554 Sodium/di- and tricarboxylate cotransporter - none -
fig|6666666.65905.peg.1042 CDS gi|522808905|gb|ATVG01000004.1| 78304 79503 1 + 1200 Sulfolipid (UDP-sulfoquinovose) biosynthesis protein - none -
fig|6666666.65905.peg.1043 CDS gi|522808905|gb|ATVG01000004.1| 79516 80664 1 + 1149 Glycosyltransferase - none -
fig|6666666.65905.peg.1044 CDS gi|522808905|gb|ATVG01000004.1| 82260 80791 -3 - 1470 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65905.peg.1045 CDS gi|522808905|gb|ATVG01000004.1| 83561 82512 -2 - 1050 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65905.peg.1046 CDS gi|522808905|gb|ATVG01000004.1| 83667 84446 3 + 780 FIG00544241: hypothetical protein - none -
fig|6666666.65905.peg.1047 CDS gi|522808905|gb|ATVG01000004.1| 84829 84503 -1 - 327 FIG00544339: hypothetical protein - none -
fig|6666666.65905.peg.1048 CDS gi|522808905|gb|ATVG01000004.1| 85549 85061 -1 - 489 hypothetical protein - none -
fig|6666666.65905.peg.1049 CDS gi|522808905|gb|ATVG01000004.1| 87048 85915 -3 - 1134 SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3) - none -
fig|6666666.65905.peg.1050 CDS gi|522808905|gb|ATVG01000004.1| 88450 87137 -1 - 1314 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) - none -
fig|6666666.65905.peg.1051 CDS gi|522808905|gb|ATVG01000004.1| 89398 88526 -1 - 873 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) - none -
fig|6666666.65905.peg.1052 CDS gi|522808905|gb|ATVG01000004.1| 90321 89506 -3 - 816 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) - none -
fig|6666666.65905.peg.1053 CDS gi|522808905|gb|ATVG01000004.1| 91245 90598 -3 - 648 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) - none -
fig|6666666.65905.peg.1054 CDS gi|522808905|gb|ATVG01000004.1| 93324 91459 -3 - 1866 ABC transporter, ATP-binding protein - none -
fig|6666666.65905.peg.1055 CDS gi|522808905|gb|ATVG01000004.1| 93409 94746 1 + 1338 putative secreted protein - none -
fig|6666666.65905.peg.1056 CDS gi|522808905|gb|ATVG01000004.1| 95760 94753 -3 - 1008 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65905.peg.1057 CDS gi|522808905|gb|ATVG01000004.1| 96692 95760 -2 - 933 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.65905.peg.1058 CDS gi|522808905|gb|ATVG01000004.1| 97914 96703 -3 - 1212 Cell wall-binding protein - none -
fig|6666666.65905.peg.1059 CDS gi|522808905|gb|ATVG01000004.1| 98162 98770 2 + 609 hypothetical protein - none -
fig|6666666.65905.peg.1060 CDS gi|522808905|gb|ATVG01000004.1| 98773 99708 1 + 936 Putative membrane protein - none -
fig|6666666.65905.peg.1061 CDS gi|522808905|gb|ATVG01000004.1| 99887 100360 2 + 474 hypothetical protein - none -
fig|6666666.65905.peg.1062 CDS gi|522808905|gb|ATVG01000004.1| 102154 101309 -1 - 846 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65905.peg.1063 CDS gi|522808905|gb|ATVG01000004.1| 102188 102706 2 + 519 GCN5-related N-acetyltransferase - none -
fig|6666666.65905.peg.1064 CDS gi|522808905|gb|ATVG01000004.1| 104022 102721 -3 - 1302 putative integral membrane transporter - none -
fig|6666666.65905.peg.1065 CDS gi|522808905|gb|ATVG01000004.1| 105878 104022 -2 - 1857 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65905.peg.1066 CDS gi|522808905|gb|ATVG01000004.1| 107895 105946 -3 - 1950 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.65905.peg.1067 CDS gi|522808905|gb|ATVG01000004.1| 108908 108036 -2 - 873 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65905.peg.1068 CDS gi|522808905|gb|ATVG01000004.1| 108939 110579 3 + 1641 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65905.peg.1069 CDS gi|522808905|gb|ATVG01000004.1| 111274 110576 -1 - 699 hypothetical membrane protein - none -
fig|6666666.65905.peg.1070 CDS gi|522808905|gb|ATVG01000004.1| 111680 111261 -2 - 420 FIG00544115: hypothetical protein - none -
fig|6666666.65905.peg.1071 CDS gi|522808905|gb|ATVG01000004.1| 111694 112263 1 + 570 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65905.peg.1072 CDS gi|522808905|gb|ATVG01000004.1| 112318 112932 1 + 615 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65905.peg.1073 CDS gi|522808905|gb|ATVG01000004.1| 114140 113061 -2 - 1080 FIG00544639: hypothetical protein - none -
fig|6666666.65905.peg.1074 CDS gi|522808905|gb|ATVG01000004.1| 114234 114653 3 + 420 hypothetical protein - none -
fig|6666666.65905.peg.1075 CDS gi|522808905|gb|ATVG01000004.1| 115267 114656 -1 - 612 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.65905.peg.1076 CDS gi|522808905|gb|ATVG01000004.1| 116652 115327 -3 - 1326 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65905.peg.1077 CDS gi|522808905|gb|ATVG01000004.1| 117657 116725 -3 - 933 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65905.peg.1078 CDS gi|522808905|gb|ATVG01000004.1| 117725 118360 2 + 636 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65905.peg.1079 CDS gi|522808905|gb|ATVG01000004.1| 118520 119218 2 + 699 FIG00546567: hypothetical protein - none -
fig|6666666.65905.peg.1080 CDS gi|522808905|gb|ATVG01000004.1| 119339 119848 2 + 510 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65905.peg.1081 CDS gi|522808905|gb|ATVG01000004.1| 120110 119874 -2 - 237 hypothetical protein - none -
fig|6666666.65905.peg.1082 CDS gi|522808905|gb|ATVG01000004.1| 120717 120103 -3 - 615 molybdopterin biosynthesis enzyme - none -
fig|6666666.65905.peg.1083 CDS gi|522808905|gb|ATVG01000004.1| 122218 120791 -1 - 1428 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.65905.peg.1084 CDS gi|522808905|gb|ATVG01000004.1| 122622 122449 -3 - 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65905.peg.1085 CDS gi|522808905|gb|ATVG01000004.1| 122904 122626 -3 - 279 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.65905.peg.1086 CDS gi|522808905|gb|ATVG01000004.1| 123467 124441 2 + 975 Putative membrane protein - none -
fig|6666666.65905.peg.1087 CDS gi|522808905|gb|ATVG01000004.1| 124473 125492 3 + 1020 hypothetical protein - none -
fig|6666666.65905.peg.1088 CDS gi|522808905|gb|ATVG01000004.1| 125715 125951 3 + 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65905.peg.1089 CDS gi|522808905|gb|ATVG01000004.1| 125955 126119 3 + 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65905.peg.1090 CDS gi|522808905|gb|ATVG01000004.1| 126122 126427 2 + 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.65905.peg.1091 CDS gi|522808905|gb|ATVG01000004.1| 126442 126690 1 + 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.65905.peg.1092 CDS gi|522808905|gb|ATVG01000004.1| 127820 126819 -2 - 1002 hypothetical protein - none -
fig|6666666.65905.peg.1093 CDS gi|522808905|gb|ATVG01000004.1| 128807 127884 -2 - 924 FIG00543884: hypothetical protein - none -
fig|6666666.65905.peg.1094 CDS gi|522808905|gb|ATVG01000004.1| 130412 128853 -2 - 1560 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65905.peg.1095 CDS gi|522808905|gb|ATVG01000004.1| 131043 130459 -3 - 585 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.65905.peg.1096 CDS gi|522808905|gb|ATVG01000004.1| 132818 131127 -2 - 1692 hypothetical protein - none -
fig|6666666.65905.peg.1097 CDS gi|522808905|gb|ATVG01000004.1| 133150 133968 1 + 819 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65905.peg.1098 CDS gi|522808905|gb|ATVG01000004.1| 134310 135092 3 + 783 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65905.peg.1099 CDS gi|522808905|gb|ATVG01000004.1| 137638 135089 -1 - 2550 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65905.peg.1100 CDS gi|522808905|gb|ATVG01000004.1| 137810 139462 2 + 1653 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65905.peg.1101 CDS gi|522808905|gb|ATVG01000004.1| 139885 139478 -1 - 408 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65905.peg.1102 CDS gi|522808905|gb|ATVG01000004.1| 140730 139897 -3 - 834 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65905.peg.1103 CDS gi|522808905|gb|ATVG01000004.1| 145679 140793 -2 - 4887 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65905.peg.1104 CDS gi|522808905|gb|ATVG01000004.1| 145728 146492 3 + 765 inositol monophosphatase family protein - none -
fig|6666666.65905.peg.1105 CDS gi|522808905|gb|ATVG01000004.1| 146498 147307 2 + 810 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.65905.peg.1106 CDS gi|522808905|gb|ATVG01000004.1| 147310 147846 1 + 537 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65905.peg.1107 CDS gi|522808905|gb|ATVG01000004.1| 147847 148137 1 + 291 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65905.peg.1108 CDS gi|522808905|gb|ATVG01000004.1| 148457 149509 2 + 1053 Putative secreted protein - none -
fig|6666666.65905.peg.1109 CDS gi|522808905|gb|ATVG01000004.1| 150562 149513 -1 - 1050 FIG00544899: hypothetical protein - none -
fig|6666666.65905.peg.1110 CDS gi|522808905|gb|ATVG01000004.1| 151489 150641 -1 - 849 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65905.peg.1111 CDS gi|522808905|gb|ATVG01000004.1| 151906 151547 -1 - 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65905.peg.1112 CDS gi|522808905|gb|ATVG01000004.1| 153398 152106 -2 - 1293 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65905.peg.1113 CDS gi|522808905|gb|ATVG01000004.1| 153626 154612 2 + 987 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65905.peg.1114 CDS gi|522808905|gb|ATVG01000004.1| 154683 155762 3 + 1080 FIG00545091: hypothetical protein - none -
fig|6666666.65905.peg.1115 CDS gi|522808905|gb|ATVG01000004.1| 155796 156659 3 + 864 FIG00544583: hypothetical protein - none -
fig|6666666.65905.peg.1116 CDS gi|522808905|gb|ATVG01000004.1| 157450 156632 -1 - 819 putative rRNA methylase - none -
fig|6666666.65905.peg.1117 CDS gi|522808905|gb|ATVG01000004.1| 158656 157469 -1 - 1188 Pyridoxal phosphate-dependent aminotransferase - none -
fig|6666666.65905.peg.1118 CDS gi|522808905|gb|ATVG01000004.1| 160354 158930 -1 - 1425 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65905.peg.1119 CDS gi|522808905|gb|ATVG01000004.1| 161129 160455 -2 - 675 FIG00546806: hypothetical protein - none -
fig|6666666.65905.peg.1120 CDS gi|522808905|gb|ATVG01000004.1| 161216 162055 2 + 840 glutamine cyclotransferase - none -
fig|6666666.65905.peg.1121 CDS gi|522808905|gb|ATVG01000004.1| 162067 162606 1 + 540 FIG00545981: hypothetical protein - none -
fig|6666666.65905.peg.1122 CDS gi|522808905|gb|ATVG01000004.1| 162986 162603 -2 - 384 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65905.peg.1123 CDS gi|522808905|gb|ATVG01000004.1| 163298 163951 2 + 654 FIG00996461: hypothetical protein - none -
fig|6666666.65905.peg.1124 CDS gi|522808905|gb|ATVG01000004.1| 164238 164053 -3 - 186 FIG00543815: hypothetical protein - none -
fig|6666666.65905.peg.1125 CDS gi|522808905|gb|ATVG01000004.1| 164304 166412 3 + 2109 FIG00545438: hypothetical protein - none -
fig|6666666.65905.peg.1126 CDS gi|522808905|gb|ATVG01000004.1| 167656 166409 -1 - 1248 hypothetical protein - none -
fig|6666666.65905.peg.1127 CDS gi|522808905|gb|ATVG01000004.1| 167954 168148 2 + 195 transcriptional regulator, HTH_3 family - none -
fig|6666666.65905.peg.1128 CDS gi|522808905|gb|ATVG01000004.1| 168340 168642 1 + 303 Putative membrane protein - none -
fig|6666666.65905.peg.1129 CDS gi|522808905|gb|ATVG01000004.1| 168664 169563 1 + 900 ABC transporter, ATP-binding protein - none -
fig|6666666.65905.peg.1130 CDS gi|522808905|gb|ATVG01000004.1| 169567 170745 1 + 1179 putative ABC transporter permease - none -
fig|6666666.65905.peg.1131 CDS gi|522808905|gb|ATVG01000004.1| 170768 172423 2 + 1656 DNA repair helicase - none -
fig|6666666.65905.peg.1132 CDS gi|522808905|gb|ATVG01000004.1| 172954 172409 -1 - 546 Very large virion protein - none -
fig|6666666.65905.peg.1133 CDS gi|522808905|gb|ATVG01000004.1| 173315 172947 -2 - 369 putative membrane protein - none -
fig|6666666.65905.peg.1134 CDS gi|522808905|gb|ATVG01000004.1| 173891 173322 -2 - 570 putative cholesterol esterase - none -
fig|6666666.65905.peg.1135 CDS gi|522808905|gb|ATVG01000004.1| 173938 174639 1 + 702 FIG00546748: hypothetical protein - none -
fig|6666666.65905.peg.1136 CDS gi|522808905|gb|ATVG01000004.1| 174736 175503 1 + 768 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65905.peg.1137 CDS gi|522808905|gb|ATVG01000004.1| 175500 177113 3 + 1614 hypothetical protein - none -
fig|6666666.65905.peg.1138 CDS gi|522808907|gb|ATVG01000003.1| 71 289 2 + 219 Mobile element protein - none -
fig|6666666.65905.peg.1139 CDS gi|522808907|gb|ATVG01000003.1| 741 328 -3 - 414 DNA-binding response regulator mtrA - none -
fig|6666666.65905.peg.1140 CDS gi|522808907|gb|ATVG01000003.1| 1366 716 -1 - 651 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.65905.peg.1141 CDS gi|522808907|gb|ATVG01000003.1| 1720 1367 -1 - 354 FIG00544092: hypothetical protein - none -
fig|6666666.65905.peg.1142 CDS gi|522808907|gb|ATVG01000003.1| 1865 2863 2 + 999 Cell surface glycoprotein 1 precursor - none -
fig|6666666.65905.peg.1143 CDS gi|522808907|gb|ATVG01000003.1| 4193 2898 -2 - 1296 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65905.peg.1144 CDS gi|522808907|gb|ATVG01000003.1| 4429 5214 1 + 786 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.1145 CDS gi|522808907|gb|ATVG01000003.1| 6183 5227 -3 - 957 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65905.peg.1146 CDS gi|522808907|gb|ATVG01000003.1| 6998 6183 -2 - 816 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.65905.peg.1147 CDS gi|522808907|gb|ATVG01000003.1| 7287 6970 -3 - 318 Ferredoxin-like protein involved in electron transfer Inorganic Sulfur Assimilation
fig|6666666.65905.peg.1148 CDS gi|522808907|gb|ATVG01000003.1| 8954 7284 -2 - 1671 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.65905.peg.1149 CDS gi|522808907|gb|ATVG01000003.1| 10533 9199 -3 - 1335 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65905.peg.1150 CDS gi|522808907|gb|ATVG01000003.1| 11038 10619 -1 - 420 FIG00543823: hypothetical protein - none -
fig|6666666.65905.peg.1151 CDS gi|522808907|gb|ATVG01000003.1| 11184 11657 3 + 474 FIG00544777: hypothetical protein - none -
fig|6666666.65905.peg.1152 CDS gi|522808907|gb|ATVG01000003.1| 12057 11758 -3 - 300 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65905.peg.1153 CDS gi|522808907|gb|ATVG01000003.1| 13512 12391 -3 - 1122 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65905.peg.1154 CDS gi|522808907|gb|ATVG01000003.1| 14527 13682 -1 - 846 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65905.peg.1155 CDS gi|522808907|gb|ATVG01000003.1| 14765 16408 2 + 1644 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65905.peg.1156 CDS gi|522808907|gb|ATVG01000003.1| 16505 17845 2 + 1341 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1157 CDS gi|522808907|gb|ATVG01000003.1| 17907 18587 3 + 681 hypothetical protein - none -
fig|6666666.65905.peg.1158 CDS gi|522808907|gb|ATVG01000003.1| 19394 21019 2 + 1626 putative secreted protein - none -
fig|6666666.65905.peg.1159 CDS gi|522808907|gb|ATVG01000003.1| 21325 22542 1 + 1218 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1160 CDS gi|522808907|gb|ATVG01000003.1| 24165 22684 -3 - 1482 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65905.peg.1161 CDS gi|522808907|gb|ATVG01000003.1| 24331 25218 1 + 888 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - none -
fig|6666666.65905.peg.1162 CDS gi|522808907|gb|ATVG01000003.1| 25364 27301 2 + 1938 PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.65905.peg.1163 CDS gi|522808907|gb|ATVG01000003.1| 27340 28746 1 + 1407 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1164 CDS gi|522808907|gb|ATVG01000003.1| 28860 30470 3 + 1611 Major myo-inositol transporter IolT - none -
fig|6666666.65905.peg.1165 CDS gi|522808907|gb|ATVG01000003.1| 30518 30850 2 + 333 hypothetical protein - none -
fig|6666666.65905.peg.1166 CDS gi|522808907|gb|ATVG01000003.1| 30912 32318 3 + 1407 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.65905.peg.1167 CDS gi|522808907|gb|ATVG01000003.1| 33997 32393 -1 - 1605 Putative integral membrane protein - none -
fig|6666666.65905.peg.1168 CDS gi|522808907|gb|ATVG01000003.1| 34882 34016 -1 - 867 Putative phosphotransferase system protein - none -
fig|6666666.65905.peg.1169 CDS gi|522808907|gb|ATVG01000003.1| 37822 35030 -1 - 2793 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65905.peg.1170 CDS gi|522808907|gb|ATVG01000003.1| 38081 39418 2 + 1338 glutamine synthetase family protein Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65905.peg.1171 CDS gi|522808907|gb|ATVG01000003.1| 39432 40583 3 + 1152 nodulin / glutamate-ammonia ligase-like protein - none -
fig|6666666.65905.peg.1172 CDS gi|522808907|gb|ATVG01000003.1| 40599 41780 3 + 1182 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65905.peg.1173 CDS gi|522808907|gb|ATVG01000003.1| 41959 42726 1 + 768 Lactam utilization protein LamB CBSS-279010.5.peg.587;
EC699-706
fig|6666666.65905.peg.1174 CDS gi|522808907|gb|ATVG01000003.1| 42726 44273 3 + 1548 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) CBSS-279010.5.peg.587;
CBSS-279010.5.peg.587;
EC699-706;
EC699-706
fig|6666666.65905.peg.1175 CDS gi|522808907|gb|ATVG01000003.1| 44273 46021 2 + 1749 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65905.peg.1176 CDS gi|522808907|gb|ATVG01000003.1| 46104 47732 3 + 1629 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.65905.peg.1177 CDS gi|522808907|gb|ATVG01000003.1| 47809 49212 1 + 1404 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65905.peg.1178 CDS gi|522808907|gb|ATVG01000003.1| 49999 49229 -1 - 771 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase CBSS-279010.5.peg.587
fig|6666666.65905.peg.1179 CDS gi|522808907|gb|ATVG01000003.1| 51249 49999 -3 - 1251 FIG038418: hypothetical protein clustering with LamB - none -
fig|6666666.65905.peg.1180 CDS gi|522808907|gb|ATVG01000003.1| 52529 51348 -2 - 1182 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.65905.peg.1181 CDS gi|522808907|gb|ATVG01000003.1| 53620 52526 -1 - 1095 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.65905.peg.1182 CDS gi|522808907|gb|ATVG01000003.1| 53863 53621 -1 - 243 FIG00547530: hypothetical protein - none -
fig|6666666.65905.peg.1183 CDS gi|522808907|gb|ATVG01000003.1| 55537 53876 -1 - 1662 Predicted sodium-dependent galactose transporter - none -
fig|6666666.65905.peg.1184 CDS gi|522808907|gb|ATVG01000003.1| 56488 55550 -1 - 939 putative aldose-1-epimerase - none -
fig|6666666.65905.peg.1185 CDS gi|522808907|gb|ATVG01000003.1| 57004 56558 -1 - 447 FIG00546022: hypothetical protein - none -
fig|6666666.65905.peg.1186 CDS gi|522808907|gb|ATVG01000003.1| 57045 57953 3 + 909 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65905.peg.1187 CDS gi|522808907|gb|ATVG01000003.1| 58442 57939 -2 - 504 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65905.peg.1188 CDS gi|522808907|gb|ATVG01000003.1| 59675 58476 -2 - 1200 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65905.peg.1189 CDS gi|522808907|gb|ATVG01000003.1| 59935 61140 1 + 1206 hypothetical protein - none -
fig|6666666.65905.peg.1190 CDS gi|522808907|gb|ATVG01000003.1| 61615 61160 -1 - 456 FIG00545249: hypothetical protein - none -
fig|6666666.65905.peg.1191 CDS gi|522808907|gb|ATVG01000003.1| 62347 61622 -1 - 726 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65905.peg.1192 CDS gi|522808907|gb|ATVG01000003.1| 62392 63813 1 + 1422 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.65905.peg.1193 CDS gi|522808907|gb|ATVG01000003.1| 63825 65198 3 + 1374 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65905.peg.1194 CDS gi|522808907|gb|ATVG01000003.1| 65237 65437 2 + 201 hypothetical protein - none -
fig|6666666.65905.peg.1195 CDS gi|522808907|gb|ATVG01000003.1| 65437 66024 1 + 588 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65905.peg.1196 CDS gi|522808907|gb|ATVG01000003.1| 66729 66049 -3 - 681 hypothetical protein - none -
fig|6666666.65905.peg.1197 CDS gi|522808907|gb|ATVG01000003.1| 66817 67218 1 + 402 FIG00547406: hypothetical protein - none -
fig|6666666.65905.peg.1198 CDS gi|522808907|gb|ATVG01000003.1| 67262 68137 2 + 876 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65905.peg.1199 CDS gi|522808907|gb|ATVG01000003.1| 68183 69943 2 + 1761 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65905.peg.1200 CDS gi|522808907|gb|ATVG01000003.1| 69965 70531 2 + 567 FIG00545040: hypothetical protein - none -
fig|6666666.65905.peg.1201 CDS gi|522808907|gb|ATVG01000003.1| 73928 70515 -2 - 3414 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65905.peg.1202 CDS gi|522808907|gb|ATVG01000003.1| 75224 74037 -2 - 1188 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65905.peg.1203 CDS gi|522808907|gb|ATVG01000003.1| 76137 75217 -3 - 921 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65905.peg.1204 CDS gi|522808907|gb|ATVG01000003.1| 77649 76138 -3 - 1512 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65905.peg.1205 CDS gi|522808907|gb|ATVG01000003.1| 77846 78481 2 + 636 putative superinfection immunity protein - none -
fig|6666666.65905.peg.1206 CDS gi|522808907|gb|ATVG01000003.1| 79931 78504 -2 - 1428 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65905.peg.1207 CDS gi|522808907|gb|ATVG01000003.1| 81221 80004 -2 - 1218 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65905.peg.1208 CDS gi|522808907|gb|ATVG01000003.1| 81645 81262 -3 - 384 predicted transcriptional regulator - none -
fig|6666666.65905.peg.1209 CDS gi|522808907|gb|ATVG01000003.1| 82346 81708 -2 - 639 Uracil phosphoribosyltransferase (EC 2.4.2.9) - none -
fig|6666666.65905.peg.1210 CDS gi|522808907|gb|ATVG01000003.1| 82414 82734 1 + 321 hypothetical protein - none -
fig|6666666.65905.peg.1211 CDS gi|522808907|gb|ATVG01000003.1| 82738 83712 1 + 975 FIG00544549: hypothetical protein - none -
fig|6666666.65905.peg.1212 CDS gi|522808907|gb|ATVG01000003.1| 83750 84988 2 + 1239 FIG026501: hypothetical protein - none -
fig|6666666.65905.peg.1213 CDS gi|522808907|gb|ATVG01000003.1| 85971 84985 -3 - 987 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.65905.peg.1214 CDS gi|522808907|gb|ATVG01000003.1| 85996 87363 1 + 1368 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65905.peg.1215 CDS gi|522808907|gb|ATVG01000003.1| 89406 88306 -3 - 1101 putative membrane protein - none -
fig|6666666.65905.peg.1216 CDS gi|522808907|gb|ATVG01000003.1| 90544 89498 -1 - 1047 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65905.peg.1217 CDS gi|522808907|gb|ATVG01000003.1| 90857 90666 -2 - 192 hypothetical protein - none -
fig|6666666.65905.peg.1218 CDS gi|522808907|gb|ATVG01000003.1| 91795 90935 -1 - 861 Putative inner membrane protein - none -
fig|6666666.65905.peg.1219 CDS gi|522808907|gb|ATVG01000003.1| 92783 91857 -2 - 927 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65905.peg.1220 CDS gi|522808907|gb|ATVG01000003.1| 94043 92793 -2 - 1251 putative transport protein - none -
fig|6666666.65905.peg.1221 CDS gi|522808907|gb|ATVG01000003.1| 94215 95231 3 + 1017 Siderophore-interacting protein - none -
fig|6666666.65905.peg.1222 CDS gi|522808907|gb|ATVG01000003.1| 95334 97550 3 + 2217 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.65905.peg.1223 CDS gi|522808907|gb|ATVG01000003.1| 99117 97624 -3 - 1494 Multidrug resistance protein B - none -
fig|6666666.65905.peg.1224 CDS gi|522808907|gb|ATVG01000003.1| 99308 100636 2 + 1329 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65905.peg.1225 CDS gi|522808907|gb|ATVG01000003.1| 100670 101872 2 + 1203 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65905.peg.1226 CDS gi|522808907|gb|ATVG01000003.1| 102279 101929 -3 - 351 hypothetical protein - none -
fig|6666666.65905.peg.1227 CDS gi|522808907|gb|ATVG01000003.1| 103160 102294 -2 - 867 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65905.peg.1228 CDS gi|522808907|gb|ATVG01000003.1| 103176 103646 3 + 471 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65905.peg.1229 CDS gi|522808907|gb|ATVG01000003.1| 103852 104097 1 + 246 hypothetical protein - none -
fig|6666666.65905.peg.1230 CDS gi|522808907|gb|ATVG01000003.1| 104105 106048 2 + 1944 Ferrous iron transport protein B - none -
fig|6666666.65905.peg.1231 CDS gi|522808907|gb|ATVG01000003.1| 107783 106332 -2 - 1452 transmembrane protein, distant homology with ydbT - none -
fig|6666666.65905.peg.1232 CDS gi|522808907|gb|ATVG01000003.1| 108235 107780 -1 - 456 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65905.peg.1233 CDS gi|522808907|gb|ATVG01000003.1| 111471 108271 -3 - 3201 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65905.peg.1234 CDS gi|522808907|gb|ATVG01000003.1| 111684 112568 3 + 885 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.1235 CDS gi|522808907|gb|ATVG01000003.1| 112632 113729 3 + 1098 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.1236 CDS gi|522808907|gb|ATVG01000003.1| 113726 114427 2 + 702 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.1237 CDS gi|522808907|gb|ATVG01000003.1| 115643 114561 -2 - 1083 putative ABC transporter, periplasmic iron-siderophore binding protein - none -
fig|6666666.65905.peg.1238 CDS gi|522808907|gb|ATVG01000003.1| 115875 117044 3 + 1170 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65905.peg.1239 CDS gi|522808907|gb|ATVG01000003.1| 117144 118136 3 + 993 ABC-type Fe3+-siderophore transport system, permease 2 component - none -
fig|6666666.65905.peg.1240 CDS gi|522808907|gb|ATVG01000003.1| 118133 118969 2 + 837 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65905.peg.1241 CDS gi|522808907|gb|ATVG01000003.1| 119892 118966 -3 - 927 FIG00546271: hypothetical protein - none -
fig|6666666.65905.peg.1242 CDS gi|522808907|gb|ATVG01000003.1| 119980 120666 1 + 687 No significant database matches - none -
fig|6666666.65905.peg.1243 CDS gi|522808907|gb|ATVG01000003.1| 122397 120694 -3 - 1704 DNA polymerase-like protein PA0670 - none -
fig|6666666.65905.peg.1244 CDS gi|522808907|gb|ATVG01000003.1| 123020 122394 -2 - 627 hypothetical protein - none -
fig|6666666.65905.peg.1245 CDS gi|522808907|gb|ATVG01000003.1| 123153 123560 3 + 408 hypothetical membrane protein - none -
fig|6666666.65905.peg.1246 CDS gi|522808907|gb|ATVG01000003.1| 123662 124906 2 + 1245 Membrane-fusion protein - none -
fig|6666666.65905.peg.1247 CDS gi|522808907|gb|ATVG01000003.1| 124910 125674 2 + 765 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65905.peg.1248 CDS gi|522808907|gb|ATVG01000003.1| 125671 126978 1 + 1308 ABC transporter, permease protein - none -
fig|6666666.65905.peg.1249 CDS gi|522808907|gb|ATVG01000003.1| 128702 127134 -2 - 1569 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65905.peg.1250 CDS gi|522808907|gb|ATVG01000003.1| 130595 128739 -2 - 1857 hypothetical protein - none -
fig|6666666.65905.peg.1251 CDS gi|522808907|gb|ATVG01000003.1| 131759 130617 -2 - 1143 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65905.peg.1252 CDS gi|522808907|gb|ATVG01000003.1| 133305 131785 -3 - 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65905.peg.1253 CDS gi|522808907|gb|ATVG01000003.1| 133474 133845 1 + 372 FIG00544572: hypothetical protein - none -
fig|6666666.65905.peg.1254 CDS gi|522808907|gb|ATVG01000003.1| 134779 133895 -1 - 885 hypothetical protein - none -
fig|6666666.65905.peg.1255 CDS gi|522808907|gb|ATVG01000003.1| 135432 134848 -3 - 585 putative RNA polymerase sigma factor - none -
fig|6666666.65905.peg.1256 CDS gi|522808907|gb|ATVG01000003.1| 135623 135946 2 + 324 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.65905.peg.1257 CDS gi|522808907|gb|ATVG01000003.1| 137714 136098 -2 - 1617 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65905.peg.1258 CDS gi|522808907|gb|ATVG01000003.1| 138034 137741 -1 - 294 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65905.peg.1259 CDS gi|522808907|gb|ATVG01000003.1| 139432 138380 -1 - 1053 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65905.peg.1260 CDS gi|522808907|gb|ATVG01000003.1| 139982 139425 -2 - 558 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65905.peg.1261 CDS gi|522808907|gb|ATVG01000003.1| 140740 139985 -1 - 756 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.65905.peg.1262 CDS gi|522808907|gb|ATVG01000003.1| 141219 140740 -3 - 480 hypothetical protein - none -
fig|6666666.65905.peg.1263 CDS gi|522808907|gb|ATVG01000003.1| 141752 141261 -2 - 492 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.65905.peg.1264 CDS gi|522808907|gb|ATVG01000003.1| 142767 141745 -3 - 1023 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1265 CDS gi|522808907|gb|ATVG01000003.1| 144739 142868 -1 - 1872 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65905.peg.1266 CDS gi|522808907|gb|ATVG01000003.1| 144816 145703 3 + 888 FIG00545792: hypothetical protein - none -
fig|6666666.65905.peg.1267 CDS gi|522808907|gb|ATVG01000003.1| 146113 145700 -1 - 414 hypothetical protein - none -
fig|6666666.65905.peg.1268 CDS gi|522808907|gb|ATVG01000003.1| 147843 146107 -3 - 1737 hypothetical protein - none -
fig|6666666.65905.peg.1269 CDS gi|522808907|gb|ATVG01000003.1| 148184 147840 -2 - 345 hypothetical protein - none -
fig|6666666.65905.peg.1270 CDS gi|522808907|gb|ATVG01000003.1| 149782 148328 -1 - 1455 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65905.peg.1271 CDS gi|522808907|gb|ATVG01000003.1| 149811 151352 3 + 1542 FAD/FMN-containing dehydrogenases - none -
fig|6666666.65905.peg.1272 CDS gi|522808907|gb|ATVG01000003.1| 151442 152728 2 + 1287 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65905.peg.1273 CDS gi|522808907|gb|ATVG01000003.1| 153668 153111 -2 - 558 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.65905.peg.1274 CDS gi|522808907|gb|ATVG01000003.1| 154150 153668 -1 - 483 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65905.peg.1275 CDS gi|522808907|gb|ATVG01000003.1| 154727 154506 -2 - 222 FIG00544893: hypothetical protein - none -
fig|6666666.65905.peg.1276 CDS gi|522808907|gb|ATVG01000003.1| 155115 154792 -3 - 324 FIG00543840: hypothetical protein - none -
fig|6666666.65905.peg.1277 CDS gi|522808907|gb|ATVG01000003.1| 156553 155288 -1 - 1266 FIG00543916: hypothetical protein - none -
fig|6666666.65905.peg.1278 CDS gi|522808907|gb|ATVG01000003.1| 159012 156550 -3 - 2463 FtsK/SpoIIIE family protein - none -
fig|6666666.65905.peg.1279 CDS gi|522808907|gb|ATVG01000003.1| 160496 164725 2 + 4230 hypothetical protein - none -
fig|6666666.65905.peg.1280 CDS gi|522808907|gb|ATVG01000003.1| 164818 165099 1 + 282 hypothetical protein - none -
fig|6666666.65905.peg.1281 CDS gi|522808907|gb|ATVG01000003.1| 166003 167676 1 + 1674 TolA protein Ton and Tol transport systems
fig|6666666.65905.peg.1282 CDS gi|522808907|gb|ATVG01000003.1| 168516 167935 -3 - 582 FMN reductase, NADPH-dependent - none -
fig|6666666.65905.peg.1283 CDS gi|522808907|gb|ATVG01000003.1| 168724 168557 -1 - 168 FIG00548447: hypothetical protein - none -
fig|6666666.65905.peg.1284 CDS gi|522808907|gb|ATVG01000003.1| 169730 168810 -2 - 921 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65905.peg.1285 CDS gi|522808907|gb|ATVG01000003.1| 172082 169887 -2 - 2196 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65905.peg.1286 CDS gi|522808907|gb|ATVG01000003.1| 172452 172150 -3 - 303 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65905.peg.1287 CDS gi|522808907|gb|ATVG01000003.1| 174185 173766 -2 - 420 single-stranded DNA-binding protein - none -
fig|6666666.65905.peg.1288 CDS gi|522808907|gb|ATVG01000003.1| 174414 174271 -3 - 144 hypothetical protein - none -
fig|6666666.65905.peg.1289 CDS gi|522808907|gb|ATVG01000003.1| 175595 174579 -2 - 1017 hypothetical protein - none -
fig|6666666.65905.peg.1290 CDS gi|522808907|gb|ATVG01000003.1| 176320 175748 -1 - 573 hypothetical protein - none -
fig|6666666.65905.peg.1291 CDS gi|522808907|gb|ATVG01000003.1| 178804 176321 -1 - 2484 restriction enzyme, alpha subunit - none -
fig|6666666.65905.peg.1292 CDS gi|522808907|gb|ATVG01000003.1| 180606 179131 -3 - 1476 Phage integrase: site-specific recombinase - none -
fig|6666666.65905.peg.1293 CDS gi|522808907|gb|ATVG01000003.1| 181996 180611 -1 - 1386 FtsK/SpoIIIE family protein - none -
fig|6666666.65905.peg.1294 CDS gi|522808907|gb|ATVG01000003.1| 182256 183623 3 + 1368 FIG00544388: hypothetical protein - none -
fig|6666666.65905.peg.1295 CDS gi|522808907|gb|ATVG01000003.1| 183788 183672 -2 - 117 hypothetical protein - none -
fig|6666666.65905.peg.1296 CDS gi|522808907|gb|ATVG01000003.1| 183816 184973 3 + 1158 serine protease - none -
fig|6666666.65905.peg.1297 CDS gi|522808907|gb|ATVG01000003.1| 185364 184936 -3 - 429 FIG00544350: hypothetical protein - none -
fig|6666666.65905.peg.1298 CDS gi|522808907|gb|ATVG01000003.1| 186727 185507 -1 - 1221 hypothetical protein - none -
fig|6666666.65905.peg.1299 CDS gi|522808907|gb|ATVG01000003.1| 187756 186869 -1 - 888 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65905.peg.1300 CDS gi|522808907|gb|ATVG01000003.1| 188449 187880 -1 - 570 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65905.peg.1301 CDS gi|522808907|gb|ATVG01000003.1| 189563 188553 -2 - 1011 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65905.peg.1302 CDS gi|522808907|gb|ATVG01000003.1| 190216 189680 -1 - 537 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.65905.peg.1303 CDS gi|522808907|gb|ATVG01000003.1| 190712 190308 -2 - 405 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.65905.peg.1304 CDS gi|522808907|gb|ATVG01000003.1| 191084 190716 -2 - 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.65905.peg.1305 CDS gi|522808907|gb|ATVG01000003.1| 191547 191329 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65905.peg.1306 CDS gi|522808907|gb|ATVG01000003.1| 192605 191760 -2 - 846 Putative secreted protein - none -
fig|6666666.65905.peg.1307 CDS gi|522808907|gb|ATVG01000003.1| 193170 192625 -3 - 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65905.peg.1308 CDS gi|522808907|gb|ATVG01000003.1| 194511 193171 -3 - 1341 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65905.peg.1309 CDS gi|522808907|gb|ATVG01000003.1| 195262 194801 -1 - 462 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65905.peg.1310 CDS gi|522808907|gb|ATVG01000003.1| 195454 195269 -1 - 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65905.peg.1311 CDS gi|522808907|gb|ATVG01000003.1| 196069 195458 -1 - 612 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.65905.peg.1312 CDS gi|522808907|gb|ATVG01000003.1| 196520 196110 -2 - 411 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65905.peg.1313 CDS gi|522808907|gb|ATVG01000003.1| 197060 196524 -2 - 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65905.peg.1314 CDS gi|522808907|gb|ATVG01000003.1| 197458 197075 -1 - 384 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.65905.peg.1315 CDS gi|522808907|gb|ATVG01000003.1| 197783 198127 2 + 345 FIG00544084: hypothetical protein - none -
fig|6666666.65905.peg.1316 CDS gi|522808907|gb|ATVG01000003.1| 198128 198967 2 + 840 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.65905.peg.1317 CDS gi|522808907|gb|ATVG01000003.1| 199755 198970 -3 - 786 formate/nitrite transporter family protein - none -
fig|6666666.65905.peg.1318 CDS gi|522808907|gb|ATVG01000003.1| 199956 200243 3 + 288 hypothetical protein - none -
fig|6666666.65905.peg.1319 CDS gi|522808907|gb|ATVG01000003.1| 200254 201501 1 + 1248 Formamidase (EC 3.5.1.49) - none -
fig|6666666.65905.peg.1320 CDS gi|522808907|gb|ATVG01000003.1| 202145 201567 -2 - 579 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65905.peg.1321 CDS gi|522808907|gb|ATVG01000003.1| 202463 202149 -2 - 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65905.peg.1322 CDS gi|522808907|gb|ATVG01000003.1| 202718 202464 -2 - 255 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65905.peg.1323 CDS gi|522808907|gb|ATVG01000003.1| 203858 203679 -2 - 180 hypothetical protein - none -
fig|6666666.65905.peg.1324 CDS gi|522808907|gb|ATVG01000003.1| 204510 204346 -3 - 165 Mobile element protein - none -
fig|6666666.65905.peg.1325 CDS gi|522808908|gb|ATVG01000002.1| 24 242 3 + 219 Mobile element protein - none -
fig|6666666.65905.peg.1326 CDS gi|522808908|gb|ATVG01000002.1| 304 1449 1 + 1146 Drug resistance transporter EmrB/QacA subfamily - none -
fig|6666666.65905.peg.1327 CDS gi|522808908|gb|ATVG01000002.1| 2013 2300 3 + 288 hypothetical protein - none -
fig|6666666.65905.peg.1328 CDS gi|522808908|gb|ATVG01000002.1| 2647 2297 -1 - 351 drug resistance transporter, Bcr/CflA subfamily - none -
fig|6666666.65905.peg.1329 CDS gi|522808908|gb|ATVG01000002.1| 5883 5137 -3 - 747 FIG00543922: hypothetical protein - none -
fig|6666666.65905.peg.1330 CDS gi|522808908|gb|ATVG01000002.1| 6356 5883 -2 - 474 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.65905.peg.1331 CDS gi|522808908|gb|ATVG01000002.1| 6925 6353 -1 - 573 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.65905.peg.1332 CDS gi|522808908|gb|ATVG01000002.1| 9060 6973 -3 - 2088 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65905.peg.1333 CDS gi|522808908|gb|ATVG01000002.1| 10614 9064 -3 - 1551 Dihydroxyacetone kinase family protein - none -
fig|6666666.65905.peg.1334 CDS gi|522808908|gb|ATVG01000002.1| 11271 10627 -3 - 645 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65905.peg.1335 CDS gi|522808908|gb|ATVG01000002.1| 12215 11268 -2 - 948 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65905.peg.1336 CDS gi|522808908|gb|ATVG01000002.1| 12254 13177 2 + 924 Putative exported protein - none -
fig|6666666.65905.peg.1337 CDS gi|522808908|gb|ATVG01000002.1| 14307 13219 -3 - 1089 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65905.peg.1338 CDS gi|522808908|gb|ATVG01000002.1| 15331 14333 -1 - 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) - none -
fig|6666666.65905.peg.1339 CDS gi|522808908|gb|ATVG01000002.1| 15465 16463 3 + 999 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65905.peg.1340 CDS gi|522808908|gb|ATVG01000002.1| 17103 16522 -3 - 582 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65905.peg.1341 CDS gi|522808908|gb|ATVG01000002.1| 18620 17121 -2 - 1500 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65905.peg.1342 CDS gi|522808908|gb|ATVG01000002.1| 18717 19382 3 + 666 Transcriptional regulator, IclR family - none -
fig|6666666.65905.peg.1343 CDS gi|522808908|gb|ATVG01000002.1| 19458 20093 3 + 636 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65905.peg.1344 CDS gi|522808908|gb|ATVG01000002.1| 20444 21586 2 + 1143 Amidohydrolase precursor - none -
fig|6666666.65905.peg.1345 CDS gi|522808908|gb|ATVG01000002.1| 23499 22069 -3 - 1431 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65905.peg.1346 CDS gi|522808908|gb|ATVG01000002.1| 23671 24774 1 + 1104 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65905.peg.1347 CDS gi|522808908|gb|ATVG01000002.1| 25644 24832 -3 - 813 Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65905.peg.1348 CDS gi|522808908|gb|ATVG01000002.1| 27234 25687 -3 - 1548 FIG00545237: hypothetical protein - none -
fig|6666666.65905.peg.1349 CDS gi|522808908|gb|ATVG01000002.1| 28386 27337 -3 - 1050 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65905.peg.1350 CDS gi|522808908|gb|ATVG01000002.1| 29445 28486 -3 - 960 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65905.peg.1351 CDS gi|522808908|gb|ATVG01000002.1| 30532 29525 -1 - 1008 Putative lipoprotein - none -
fig|6666666.65905.peg.1352 CDS gi|522808908|gb|ATVG01000002.1| 32333 30492 -2 - 1842 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.65905.peg.1353 CDS gi|522808908|gb|ATVG01000002.1| 33383 32376 -2 - 1008 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65905.peg.1354 CDS gi|522808908|gb|ATVG01000002.1| 33491 34045 2 + 555 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65905.peg.1355 CDS gi|522808908|gb|ATVG01000002.1| 34057 35400 1 + 1344 FIG00546232: hypothetical protein - none -
fig|6666666.65905.peg.1356 CDS gi|522808908|gb|ATVG01000002.1| 36626 35397 -2 - 1230 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.65905.peg.1357 CDS gi|522808908|gb|ATVG01000002.1| 36765 37850 3 + 1086 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.65905.peg.1358 CDS gi|522808908|gb|ATVG01000002.1| 38924 37857 -2 - 1068 Putative aldo/keto-reductase family protein - none -
fig|6666666.65905.peg.1359 CDS gi|522808908|gb|ATVG01000002.1| 40550 39057 -2 - 1494 FIG00545305: hypothetical protein - none -
fig|6666666.65905.peg.1360 CDS gi|522808908|gb|ATVG01000002.1| 43327 40721 -1 - 2607 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65905.peg.1361 CDS gi|522808908|gb|ATVG01000002.1| 43419 44438 3 + 1020 Ku domain protein Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65905.peg.1362 CDS gi|522808908|gb|ATVG01000002.1| 46125 44614 -3 - 1512 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65905.peg.1363 CDS gi|522808908|gb|ATVG01000002.1| 46164 47027 3 + 864 hypothetical protein - none -
fig|6666666.65905.peg.1364 CDS gi|522808908|gb|ATVG01000002.1| 47997 47029 -3 - 969 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65905.peg.1365 CDS gi|522808908|gb|ATVG01000002.1| 48088 48420 1 + 333 Conserved putative integral membrane protein - none -
fig|6666666.65905.peg.1366 CDS gi|522808908|gb|ATVG01000002.1| 49355 48525 -2 - 831 siderophore-interacting protein - none -
fig|6666666.65905.peg.1367 CDS gi|522808908|gb|ATVG01000002.1| 51003 49516 -3 - 1488 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65905.peg.1368 CDS gi|522808908|gb|ATVG01000002.1| 51300 51004 -3 - 297 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65905.peg.1369 CDS gi|522808908|gb|ATVG01000002.1| 51268 51432 1 + 165 hypothetical protein - none -
fig|6666666.65905.peg.1370 CDS gi|522808908|gb|ATVG01000002.1| 51529 52191 1 + 663 FIG00544014: hypothetical protein - none -
fig|6666666.65905.peg.1371 CDS gi|522808908|gb|ATVG01000002.1| 54230 52188 -2 - 2043 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65905.peg.1372 CDS gi|522808908|gb|ATVG01000002.1| 54883 54275 -1 - 609 HTH-type transcriptional activator tipA - none -
fig|6666666.65905.peg.1373 CDS gi|522808908|gb|ATVG01000002.1| 55123 55797 1 + 675 FIG00544413: hypothetical protein - none -
fig|6666666.65905.peg.1374 CDS gi|522808908|gb|ATVG01000002.1| 56748 55831 -3 - 918 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.65905.peg.1375 CDS gi|522808908|gb|ATVG01000002.1| 56878 57996 1 + 1119 FIG00544505: hypothetical protein - none -
fig|6666666.65905.peg.1376 CDS gi|522808908|gb|ATVG01000002.1| 59108 57993 -2 - 1116 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.65905.peg.1377 CDS gi|522808908|gb|ATVG01000002.1| 61058 60054 -2 - 1005 Putative hydrolase - none -
fig|6666666.65905.peg.1378 CDS gi|522808908|gb|ATVG01000002.1| 62232 61123 -3 - 1110 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65905.peg.1379 CDS gi|522808908|gb|ATVG01000002.1| 63209 62268 -2 - 942 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.65905.peg.1380 CDS gi|522808908|gb|ATVG01000002.1| 64008 63226 -3 - 783 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.65905.peg.1381 CDS gi|522808908|gb|ATVG01000002.1| 65286 64030 -3 - 1257 SAM-dependent methyltransferase - none -
fig|6666666.65905.peg.1382 CDS gi|522808908|gb|ATVG01000002.1| 66138 65287 -3 - 852 FIG00996530: hypothetical protein - none -
fig|6666666.65905.peg.1383 CDS gi|522808908|gb|ATVG01000002.1| 66944 66150 -2 - 795 ABC transporter, ATP-binding protein - none -
fig|6666666.65905.peg.1384 CDS gi|522808908|gb|ATVG01000002.1| 67063 69015 1 + 1953 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.65905.peg.1385 CDS gi|522808908|gb|ATVG01000002.1| 69071 71239 2 + 2169 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65905.peg.1386 CDS gi|522808908|gb|ATVG01000002.1| 72569 71196 -2 - 1374 putative sodium:dicarboxylate symporter - none -
fig|6666666.65905.peg.1387 CDS gi|522808908|gb|ATVG01000002.1| 73759 72851 -1 - 909 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65905.peg.1388 CDS gi|522808908|gb|ATVG01000002.1| 74068 73760 -1 - 309 FIG00544011: hypothetical protein - none -
fig|6666666.65905.peg.1389 CDS gi|522808908|gb|ATVG01000002.1| 74243 74097 -2 - 147 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.65905.peg.1390 CDS gi|522808908|gb|ATVG01000002.1| 75071 74379 -2 - 693 FIG00996186: hypothetical protein - none -
fig|6666666.65905.peg.1391 CDS gi|522808908|gb|ATVG01000002.1| 75704 75150 -2 - 555 possible secreted protein - none -
fig|6666666.65905.peg.1392 CDS gi|522808908|gb|ATVG01000002.1| 76249 75878 -1 - 372 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1393 CDS gi|522808908|gb|ATVG01000002.1| 77714 76260 -2 - 1455 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1394 CDS gi|522808908|gb|ATVG01000002.1| 78680 77718 -2 - 963 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1395 CDS gi|522808908|gb|ATVG01000002.1| 80381 78741 -2 - 1641 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1396 CDS gi|522808908|gb|ATVG01000002.1| 81321 80506 -3 - 816 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1397 CDS gi|522808908|gb|ATVG01000002.1| 81900 81328 -3 - 573 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1398 CDS gi|522808908|gb|ATVG01000002.1| 82181 81945 -2 - 237 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1399 CDS gi|522808908|gb|ATVG01000002.1| 83081 82284 -2 - 798 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65905.peg.1400 CDS gi|522808908|gb|ATVG01000002.1| 83813 83367 -2 - 447 ATP synthase protein I - none -
fig|6666666.65905.peg.1401 CDS gi|522808908|gb|ATVG01000002.1| 84982 83825 -1 - 1158 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.65905.peg.1402 CDS gi|522808908|gb|ATVG01000002.1| 85660 84986 -1 - 675 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65905.peg.1403 CDS gi|522808908|gb|ATVG01000002.1| 86616 85678 -3 - 939 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.65905.peg.1404 CDS gi|522808908|gb|ATVG01000002.1| 87696 86620 -3 - 1077 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.65905.peg.1405 CDS gi|522808908|gb|ATVG01000002.1| 89636 87696 -2 - 1941 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65905.peg.1406 CDS gi|522808908|gb|ATVG01000002.1| 90162 92063 3 + 1902 acyl-CoA synthetase - none -
fig|6666666.65905.peg.1407 CDS gi|522808908|gb|ATVG01000002.1| 92118 93260 3 + 1143 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65905.peg.1408 CDS gi|522808908|gb|ATVG01000002.1| 93329 94663 2 + 1335 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65905.peg.1409 CDS gi|522808908|gb|ATVG01000002.1| 94668 95144 3 + 477 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65905.peg.1410 CDS gi|522808908|gb|ATVG01000002.1| 95141 95782 2 + 642 FIG00546849: hypothetical protein - none -
fig|6666666.65905.peg.1411 CDS gi|522808908|gb|ATVG01000002.1| 97314 95797 -3 - 1518 Multicopper oxidase Copper homeostasis
fig|6666666.65905.peg.1412 CDS gi|522808908|gb|ATVG01000002.1| 97476 98288 3 + 813 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.65905.peg.1413 CDS gi|522808908|gb|ATVG01000002.1| 98404 100233 1 + 1830 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) / Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.65905.peg.1414 CDS gi|522808908|gb|ATVG01000002.1| 101185 100244 -1 - 942 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65905.peg.1415 CDS gi|522808908|gb|ATVG01000002.1| 102576 101233 -3 - 1344 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65905.peg.1416 CDS gi|522808908|gb|ATVG01000002.1| 104008 102632 -1 - 1377 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1417 CDS gi|522808908|gb|ATVG01000002.1| 104028 105683 3 + 1656 L-lactate permease Lactate utilization
fig|6666666.65905.peg.1418 CDS gi|522808908|gb|ATVG01000002.1| 105735 106520 3 + 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.65905.peg.1419 CDS gi|522808908|gb|ATVG01000002.1| 106520 108157 2 + 1638 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.65905.peg.1420 CDS gi|522808908|gb|ATVG01000002.1| 108158 108853 2 + 696 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.65905.peg.1421 CDS gi|522808908|gb|ATVG01000002.1| 108965 110641 2 + 1677 predicted hydrolase or acyltransferase - none -
fig|6666666.65905.peg.1422 CDS gi|522808908|gb|ATVG01000002.1| 111185 111505 2 + 321 Protein yceI precursor - none -
fig|6666666.65905.peg.1423 CDS gi|522808908|gb|ATVG01000002.1| 111752 113623 2 + 1872 hypothetical protein - none -
fig|6666666.65905.peg.1424 CDS gi|522808908|gb|ATVG01000002.1| 113685 113963 3 + 279 hypothetical protein - none -
fig|6666666.65905.peg.1425 CDS gi|522808908|gb|ATVG01000002.1| 114155 114334 2 + 180 hypothetical protein - none -
fig|6666666.65905.peg.1426 CDS gi|522808908|gb|ATVG01000002.1| 114441 115394 3 + 954 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.65905.peg.1427 CDS gi|522808908|gb|ATVG01000002.1| 115557 116189 3 + 633 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65905.peg.1428 CDS gi|522808908|gb|ATVG01000002.1| 116605 116186 -1 - 420 hypothetical protein - none -
fig|6666666.65905.peg.1429 CDS gi|522808908|gb|ATVG01000002.1| 117053 116754 -2 - 300 hypothetical protein - none -
fig|6666666.65905.peg.1430 CDS gi|522808908|gb|ATVG01000002.1| 117411 117073 -3 - 339 Conserved hypothetical membrane protein - none -
fig|6666666.65905.peg.1431 CDS gi|522808908|gb|ATVG01000002.1| 118007 117495 -2 - 513 Transcriptional regulator, MarR family - none -
fig|6666666.65905.peg.1432 CDS gi|522808908|gb|ATVG01000002.1| 120843 118057 -3 - 2787 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.65905.peg.1433 CDS gi|522808908|gb|ATVG01000002.1| 122029 120848 -1 - 1182 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65905.peg.1434 CDS gi|522808908|gb|ATVG01000002.1| 122921 122076 -2 - 846 FIG00545674: hypothetical protein - none -
fig|6666666.65905.peg.1435 CDS gi|522808908|gb|ATVG01000002.1| 126008 122925 -2 - 3084 Helicase, SNF2/RAD54 family - none -
fig|6666666.65905.peg.1436 CDS gi|522808908|gb|ATVG01000002.1| 126400 127959 1 + 1560 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65905.peg.1437 CDS gi|522808908|gb|ATVG01000002.1| 128034 128723 3 + 690 FIG00544279: hypothetical protein - none -
fig|6666666.65905.peg.1438 CDS gi|522808908|gb|ATVG01000002.1| 128826 129275 3 + 450 FIG00544250: hypothetical protein - none -
fig|6666666.65905.peg.1439 CDS gi|522808908|gb|ATVG01000002.1| 131303 129363 -2 - 1941 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65905.peg.1440 CDS gi|522808908|gb|ATVG01000002.1| 132668 131475 -2 - 1194 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.65905.peg.1441 CDS gi|522808908|gb|ATVG01000002.1| 134484 132808 -3 - 1677 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.65905.peg.1442 CDS gi|522808908|gb|ATVG01000002.1| 135707 134694 -2 - 1014 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.65905.peg.1443 CDS gi|522808908|gb|ATVG01000002.1| 136245 135685 -3 - 561 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.65905.peg.1444 CDS gi|522808908|gb|ATVG01000002.1| 137097 136351 -3 - 747 Transcriptional regulator, IclR family - none -
fig|6666666.65905.peg.1445 CDS gi|522808908|gb|ATVG01000002.1| 137272 138732 1 + 1461 putative gamma-aminobutyrate permease - none -
fig|6666666.65905.peg.1446 CDS gi|522808908|gb|ATVG01000002.1| 138786 139766 3 + 981 Formiminoglutamase (EC 3.5.3.8) Histidine Degradation
fig|6666666.65905.peg.1447 CDS gi|522808908|gb|ATVG01000002.1| 141222 139876 -3 - 1347 Predicted histidine uptake transporter - none -
fig|6666666.65905.peg.1448 CDS gi|522808908|gb|ATVG01000002.1| 141459 141845 3 + 387 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65905.peg.1449 CDS gi|522808908|gb|ATVG01000002.1| 141883 145014 1 + 3132 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.65905.peg.1450 CDS gi|522808908|gb|ATVG01000002.1| 146189 145026 -2 - 1164 putative multidrug resistance protein - none -
fig|6666666.65905.peg.1451 CDS gi|522808908|gb|ATVG01000002.1| 146446 146979 1 + 534 hypothetical protein - none -
fig|6666666.65905.peg.1452 CDS gi|522808908|gb|ATVG01000002.1| 147938 146976 -2 - 963 FIG00544678: hypothetical protein - none -
fig|6666666.65905.peg.1453 CDS gi|522808908|gb|ATVG01000002.1| 149529 148075 -3 - 1455 putative esterase - none -
fig|6666666.65905.peg.1454 CDS gi|522808908|gb|ATVG01000002.1| 149747 150532 2 + 786 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.65905.peg.1455 CDS gi|522808908|gb|ATVG01000002.1| 150674 154450 2 + 3777 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65905.peg.1456 CDS gi|522808908|gb|ATVG01000002.1| 155281 154550 -1 - 732 hypothetical protein - none -
fig|6666666.65905.peg.1457 CDS gi|522808908|gb|ATVG01000002.1| 155447 156589 2 + 1143 Mrp protein homolog - none -
fig|6666666.65905.peg.1458 CDS gi|522808908|gb|ATVG01000002.1| 157276 156632 -1 - 645 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65905.peg.1459 CDS gi|522808908|gb|ATVG01000002.1| 157682 157287 -2 - 396 hypothetical protein - none -
fig|6666666.65905.peg.1460 CDS gi|522808908|gb|ATVG01000002.1| 158350 157745 -1 - 606 putative RNA polymerase sigma factor - none -
fig|6666666.65905.peg.1461 CDS gi|522808908|gb|ATVG01000002.1| 158529 159209 3 + 681 FIG00945644: hypothetical protein - none -
fig|6666666.65905.peg.1462 CDS gi|522808908|gb|ATVG01000002.1| 160438 159221 -1 - 1218 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65905.peg.1463 CDS gi|522808908|gb|ATVG01000002.1| 160538 161692 2 + 1155 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.65905.peg.1464 CDS gi|522808908|gb|ATVG01000002.1| 161705 163144 2 + 1440 levanase/invertase - none -
fig|6666666.65905.peg.1465 CDS gi|522808908|gb|ATVG01000002.1| 164052 163183 -3 - 870 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.65905.peg.1466 CDS gi|522808908|gb|ATVG01000002.1| 164230 164063 -1 - 168 FIG00545868: hypothetical protein - none -
fig|6666666.65905.peg.1467 CDS gi|522808908|gb|ATVG01000002.1| 164551 164273 -1 - 279 FIG00545506: hypothetical protein - none -
fig|6666666.65905.peg.1468 CDS gi|522808908|gb|ATVG01000002.1| 165320 164574 -2 - 747 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.65905.peg.1469 CDS gi|522808908|gb|ATVG01000002.1| 166154 165321 -2 - 834 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.65905.peg.1470 CDS gi|522808908|gb|ATVG01000002.1| 166921 166151 -1 - 771 hypothetical protein - none -
fig|6666666.65905.peg.1471 CDS gi|522808908|gb|ATVG01000002.1| 168130 166961 -1 - 1170 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1472 CDS gi|522808908|gb|ATVG01000002.1| 168264 169652 3 + 1389 Phenylalanine-specific permease - none -
fig|6666666.65905.peg.1473 CDS gi|522808908|gb|ATVG01000002.1| 169708 170679 1 + 972 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1474 CDS gi|522808908|gb|ATVG01000002.1| 170763 172145 3 + 1383 Aromatic amino acid transport protein AroP - none -
fig|6666666.65905.peg.1475 CDS gi|522808908|gb|ATVG01000002.1| 172552 172740 1 + 189 FIG00548796: hypothetical protein - none -
fig|6666666.65905.peg.1476 CDS gi|522808908|gb|ATVG01000002.1| 172776 173282 3 + 507 hypothetical protein - none -
fig|6666666.65905.peg.1477 CDS gi|522808908|gb|ATVG01000002.1| 173848 173279 -1 - 570 FIG00544080: hypothetical protein - none -
fig|6666666.65905.peg.1478 CDS gi|522808908|gb|ATVG01000002.1| 175063 173960 -1 - 1104 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1479 CDS gi|522808908|gb|ATVG01000002.1| 175393 175070 -1 - 324 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.65905.peg.1480 CDS gi|522808908|gb|ATVG01000002.1| 175848 175441 -3 - 408 hypothetical membrane protein - none -
fig|6666666.65905.peg.1481 CDS gi|522808908|gb|ATVG01000002.1| 176713 175841 -1 - 873 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65905.peg.1482 CDS gi|522808908|gb|ATVG01000002.1| 178257 176710 -3 - 1548 LpqW - none -
fig|6666666.65905.peg.1483 CDS gi|522808908|gb|ATVG01000002.1| 180187 178277 -1 - 1911 GTP-binding protein TypA/BipA - none -
fig|6666666.65905.peg.1484 CDS gi|522808908|gb|ATVG01000002.1| 180422 180165 -2 - 258 hypothetical protein - none -
fig|6666666.65905.peg.1485 CDS gi|522808908|gb|ATVG01000002.1| 180421 181089 1 + 669 FIG00544264: hypothetical protein - none -
fig|6666666.65905.peg.1486 CDS gi|522808908|gb|ATVG01000002.1| 181101 181625 3 + 525 FIG00544603: hypothetical protein - none -
fig|6666666.65905.peg.1487 CDS gi|522808908|gb|ATVG01000002.1| 181636 182475 1 + 840 Membrane protein, putative - none -
fig|6666666.65905.peg.1488 CDS gi|522808908|gb|ATVG01000002.1| 184270 182459 -1 - 1812 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.65905.peg.1489 CDS gi|522808908|gb|ATVG01000002.1| 184298 184567 2 + 270 hypothetical protein - none -
fig|6666666.65905.peg.1490 CDS gi|522808908|gb|ATVG01000002.1| 184518 185492 3 + 975 hypothetical protein - none -
fig|6666666.65905.peg.1491 CDS gi|522808908|gb|ATVG01000002.1| 185863 186774 1 + 912 hypothetical protein - none -
fig|6666666.65905.peg.1492 CDS gi|522808908|gb|ATVG01000002.1| 188509 186737 -1 - 1773 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.65905.peg.1494 CDS gi|522808908|gb|ATVG01000002.1| 189957 190934 3 + 978 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism
fig|6666666.65905.peg.1495 CDS gi|522808908|gb|ATVG01000002.1| 191970 190921 -3 - 1050 Formate dehydrogenase O putative subunit Formate hydrogenase
fig|6666666.65905.peg.1496 CDS gi|522808908|gb|ATVG01000002.1| 193031 191967 -2 - 1065 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate hydrogenase
fig|6666666.65905.peg.1497 CDS gi|522808908|gb|ATVG01000002.1| 195724 193031 -1 - 2694 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.65905.peg.1498 CDS gi|522808908|gb|ATVG01000002.1| 196309 193031 -1 - 3279 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase
fig|6666666.65905.peg.1499 CDS gi|522808908|gb|ATVG01000002.1| 196309 195746 -1 - 564 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.65905.peg.1500 CDS gi|522808908|gb|ATVG01000002.1| 196367 196780 2 + 414 hypothetical protein - none -
fig|6666666.65905.peg.1501 CDS gi|522808908|gb|ATVG01000002.1| 197683 196841 -1 - 843 FIG00547871: hypothetical protein - none -
fig|6666666.65905.peg.1502 CDS gi|522808908|gb|ATVG01000002.1| 198571 198038 -1 - 534 ThiJ/PfpI family protein - none -
fig|6666666.65905.peg.1503 CDS gi|522808908|gb|ATVG01000002.1| 199822 198626 -1 - 1197 putative permease of the major facilitator superfamily - none -
fig|6666666.65905.peg.1504 CDS gi|522808908|gb|ATVG01000002.1| 201177 199903 -3 - 1275 fatty acid alpha hydroxylase - none -
fig|6666666.65905.peg.1505 CDS gi|522808908|gb|ATVG01000002.1| 202387 201188 -1 - 1200 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1506 CDS gi|522808908|gb|ATVG01000002.1| 202969 202406 -1 - 564 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.65905.peg.1507 CDS gi|522808908|gb|ATVG01000002.1| 203569 202982 -1 - 588 hypothetical protein - none -
fig|6666666.65905.peg.1508 CDS gi|522808908|gb|ATVG01000002.1| 203601 204248 3 + 648 Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) Omega peptidases (EC 3.4.19.-)
fig|6666666.65905.peg.1509 CDS gi|522808908|gb|ATVG01000002.1| 204285 204431 3 + 147 hypothetical protein - none -
fig|6666666.65905.peg.1510 CDS gi|522808908|gb|ATVG01000002.1| 205185 204961 -3 - 225 CONSERVED 13E12 REPEAT FAMILY PROTEIN - none -
fig|6666666.65905.peg.1511 CDS gi|522808908|gb|ATVG01000002.1| 205557 205282 -3 - 276 Mobile element protein - none -
fig|6666666.65905.peg.1512 CDS gi|522808909|gb|ATVG01000001.1| 5 142 2 + 138 Mobile element protein - none -
fig|6666666.65905.peg.1513 CDS gi|522808909|gb|ATVG01000001.1| 823 437 -1 - 387 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.65905.peg.1514 CDS gi|522808909|gb|ATVG01000001.1| 1825 830 -1 - 996 hydrolase of the alpha/beta superfamily - none -
fig|6666666.65905.peg.1515 CDS gi|522808909|gb|ATVG01000001.1| 2054 4333 2 + 2280 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65905.peg.1516 CDS gi|522808909|gb|ATVG01000001.1| 4419 4853 3 + 435 FIG00672531: hypothetical protein - none -
fig|6666666.65905.peg.1517 CDS gi|522808909|gb|ATVG01000001.1| 5048 5719 2 + 672 FIG00545122: hypothetical protein - none -
fig|6666666.65905.peg.1518 CDS gi|522808909|gb|ATVG01000001.1| 5776 6576 1 + 801 hypothetical protein - none -
fig|6666666.65905.peg.1519 CDS gi|522808909|gb|ATVG01000001.1| 6905 7453 2 + 549 FIG00544641: hypothetical protein - none -
fig|6666666.65905.peg.1520 CDS gi|522808909|gb|ATVG01000001.1| 8460 7618 -3 - 843 Putative secreted protein - none -
fig|6666666.65905.peg.1521 CDS gi|522808909|gb|ATVG01000001.1| 9380 8502 -2 - 879 FIG00545058: hypothetical protein - none -
fig|6666666.65905.peg.1522 CDS gi|522808909|gb|ATVG01000001.1| 10796 9384 -2 - 1413 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65905.peg.1523 CDS gi|522808909|gb|ATVG01000001.1| 12300 10840 -3 - 1461 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.65905.peg.1524 CDS gi|522808909|gb|ATVG01000001.1| 12360 12854 3 + 495 ComA operon protein 2 - none -
fig|6666666.65905.peg.1525 CDS gi|522808909|gb|ATVG01000001.1| 13890 12889 -3 - 1002 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65905.peg.1526 CDS gi|522808909|gb|ATVG01000001.1| 14080 14682 1 + 603 FIG00544791: hypothetical protein - none -
fig|6666666.65905.peg.1527 CDS gi|522808909|gb|ATVG01000001.1| 16305 14752 -3 - 1554 Phosphomethylpyrimidine kinase (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65905.peg.1528 CDS gi|522808909|gb|ATVG01000001.1| 17727 16432 -3 - 1296 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65905.peg.1529 CDS gi|522808909|gb|ATVG01000001.1| 17996 19309 2 + 1314 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65905.peg.1530 CDS gi|522808909|gb|ATVG01000001.1| 20279 19350 -2 - 930 Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup Encapsulating protein for DyP-type peroxidase and ferritin-like protein oligomers
fig|6666666.65905.peg.1531 CDS gi|522808909|gb|ATVG01000001.1| 21140 20442 -2 - 699 Putative secreted protein - none -
fig|6666666.65905.peg.1532 CDS gi|522808909|gb|ATVG01000001.1| 21428 21147 -2 - 282 hypothetical protein - none -
fig|6666666.65905.peg.1533 CDS gi|522808909|gb|ATVG01000001.1| 21669 22025 3 + 357 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65905.peg.1534 CDS gi|522808909|gb|ATVG01000001.1| 23014 22124 -1 - 891 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65905.peg.1535 CDS gi|522808909|gb|ATVG01000001.1| 24661 23081 -1 - 1581 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65905.peg.1536 CDS gi|522808909|gb|ATVG01000001.1| 25302 24661 -3 - 642 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65905.peg.1537 CDS gi|522808909|gb|ATVG01000001.1| 25447 26004 1 + 558 Cobalamin biosynthesis protein CobG - none -
fig|6666666.65905.peg.1538 CDS gi|522808909|gb|ATVG01000001.1| 27509 26700 -2 - 810 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65905.peg.1539 CDS gi|522808909|gb|ATVG01000001.1| 28664 27510 -2 - 1155 probable metallopeptidase - none -
fig|6666666.65905.peg.1540 CDS gi|522808909|gb|ATVG01000001.1| 31505 28689 -2 - 2817 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65905.peg.1541 CDS gi|522808909|gb|ATVG01000001.1| 32531 31527 -2 - 1005 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65905.peg.1542 CDS gi|522808909|gb|ATVG01000001.1| 32860 32585 -1 - 276 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65905.peg.1543 CDS gi|522808909|gb|ATVG01000001.1| 33944 32958 -2 - 987 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65905.peg.1544 CDS gi|522808909|gb|ATVG01000001.1| 34915 33947 -1 - 969 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65905.peg.1545 CDS gi|522808909|gb|ATVG01000001.1| 36454 34988 -1 - 1467 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65905.peg.1546 CDS gi|522808909|gb|ATVG01000001.1| 36639 36451 -3 - 189 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65905.peg.1547 CDS gi|522808909|gb|ATVG01000001.1| 38206 36674 -1 - 1533 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65905.peg.1548 CDS gi|522808909|gb|ATVG01000001.1| 39816 38257 -3 - 1560 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65905.peg.1549 CDS gi|522808909|gb|ATVG01000001.1| 40662 39826 -3 - 837 RNA methyltransferase - none -
fig|6666666.65905.peg.1550 CDS gi|522808909|gb|ATVG01000001.1| 42039 40732 -3 - 1308 aspartyl aminopeptidase - none -
fig|6666666.65905.peg.1551 CDS gi|522808909|gb|ATVG01000001.1| 42090 42989 3 + 900 RecB family exonuclease - none -
fig|6666666.65905.peg.1552 CDS gi|522808909|gb|ATVG01000001.1| 44650 42986 -1 - 1665 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65905.peg.1553 CDS gi|522808909|gb|ATVG01000001.1| 46045 44738 -1 - 1308 C4-dicarboxylate transporter DcuA - none -
fig|6666666.65905.peg.1554 CDS gi|522808909|gb|ATVG01000001.1| 47978 46290 -2 - 1689 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65905.peg.1555 CDS gi|522808909|gb|ATVG01000001.1| 48859 48080 -1 - 780 Hydrolase in polyol utilization gene cluster, haloacid dehalogenase-like family - none -
fig|6666666.65905.peg.1556 CDS gi|522808909|gb|ATVG01000001.1| 49274 48885 -2 - 390 FIG00543988: hypothetical protein - none -
fig|6666666.65905.peg.1557 CDS gi|522808909|gb|ATVG01000001.1| 50564 49287 -2 - 1278 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65905.peg.1558 CDS gi|522808909|gb|ATVG01000001.1| 51449 50574 -2 - 876 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65905.peg.1559 CDS gi|522808909|gb|ATVG01000001.1| 51492 52577 3 + 1086 FIG00545923: hypothetical protein - none -
fig|6666666.65905.peg.1560 CDS gi|522808909|gb|ATVG01000001.1| 52600 53748 1 + 1149 Dihydroorotate dehydrogenase (EC 1.3.3.1) - none -
fig|6666666.65905.peg.1561 CDS gi|522808909|gb|ATVG01000001.1| 54306 53767 -3 - 540 Phospholipid-binding protein - none -
fig|6666666.65905.peg.1562 CDS gi|522808909|gb|ATVG01000001.1| 54636 55304 3 + 669 puromycin N-acetyltransferase, putative - none -
fig|6666666.65905.peg.1563 CDS gi|522808909|gb|ATVG01000001.1| 55491 56108 3 + 618 hypothetical protein - none -
fig|6666666.65905.peg.1564 CDS gi|522808909|gb|ATVG01000001.1| 56199 56780 3 + 582 FIG00545282: hypothetical protein - none -
fig|6666666.65905.peg.1565 CDS gi|522808909|gb|ATVG01000001.1| 57625 56777 -1 - 849 FIG00544636: hypothetical protein - none -
fig|6666666.65905.peg.1566 CDS gi|522808909|gb|ATVG01000001.1| 57659 58507 2 + 849 FIG00546138: hypothetical protein - none -
fig|6666666.65905.peg.1567 CDS gi|522808909|gb|ATVG01000001.1| 59608 58520 -1 - 1089 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.1568 CDS gi|522808909|gb|ATVG01000001.1| 61555 59633 -1 - 1923 cell wall-associated hydrolase - none -
fig|6666666.65905.peg.1569 CDS gi|522808909|gb|ATVG01000001.1| 61595 61729 2 + 135 hypothetical protein - none -
fig|6666666.65905.peg.1570 CDS gi|522808909|gb|ATVG01000001.1| 62682 62212 -3 - 471 hypothetical protein - none -
fig|6666666.65905.peg.1571 CDS gi|522808909|gb|ATVG01000001.1| 62999 65815 2 + 2817 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65905.peg.1572 CDS gi|522808909|gb|ATVG01000001.1| 65966 66538 2 + 573 Transcriptional regulator, TetR family - none -
fig|6666666.65905.peg.1573 CDS gi|522808909|gb|ATVG01000001.1| 69229 66566 -1 - 2664 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.1574 CDS gi|522808909|gb|ATVG01000001.1| 70345 69323 -1 - 1023 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.1575 CDS gi|522808909|gb|ATVG01000001.1| 71070 70378 -3 - 693 FIG00545571: hypothetical protein - none -
fig|6666666.65905.peg.1576 CDS gi|522808909|gb|ATVG01000001.1| 71116 71394 1 + 279 ACT domain protein - none -
fig|6666666.65905.peg.1577 CDS gi|522808909|gb|ATVG01000001.1| 71403 72767 3 + 1365 FIG00848225: hypothetical protein - none -
fig|6666666.65905.peg.1578 CDS gi|522808909|gb|ATVG01000001.1| 73100 72804 -2 - 297 hypothetical protein - none -
fig|6666666.65905.peg.1579 CDS gi|522808909|gb|ATVG01000001.1| 74828 73197 -2 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.65905.peg.1580 CDS gi|522808909|gb|ATVG01000001.1| 75054 74926 -3 - 129 hypothetical protein - none -
fig|6666666.65905.peg.1581 CDS gi|522808909|gb|ATVG01000001.1| 75543 75136 -3 - 408 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65905.peg.1582 CDS gi|522808909|gb|ATVG01000001.1| 75996 75544 -3 - 453 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65905.peg.1583 CDS gi|522808909|gb|ATVG01000001.1| 77241 75997 -3 - 1245 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.65905.peg.1584 CDS gi|522808909|gb|ATVG01000001.1| 78028 77273 -1 - 756 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65905.peg.1585 CDS gi|522808909|gb|ATVG01000001.1| 79259 78093 -2 - 1167 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65905.peg.1586 CDS gi|522808909|gb|ATVG01000001.1| 80711 79266 -2 - 1446 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65905.peg.1587 CDS gi|522808909|gb|ATVG01000001.1| 81433 80708 -1 - 726 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65905.peg.1588 CDS gi|522808909|gb|ATVG01000001.1| 81656 83443 2 + 1788 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65905.peg.1589 CDS gi|522808909|gb|ATVG01000001.1| 83450 84367 2 + 918 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65905.peg.1590 CDS gi|522808909|gb|ATVG01000001.1| 84370 85161 1 + 792 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65905.peg.1591 CDS gi|522808909|gb|ATVG01000001.1| 85226 86257 2 + 1032 Cytochrome oxidase assembly protein - none -
fig|6666666.65905.peg.1592 CDS gi|522808909|gb|ATVG01000001.1| 86300 87277 2 + 978 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65905.peg.1593 CDS gi|522808909|gb|ATVG01000001.1| 88260 87316 -3 - 945 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65905.peg.1594 CDS gi|522808909|gb|ATVG01000001.1| 88514 90640 2 + 2127 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65905.peg.1595 CDS gi|522808909|gb|ATVG01000001.1| 90666 91748 3 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.65905.peg.1596 CDS gi|522808909|gb|ATVG01000001.1| 91874 93412 2 + 1539 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65905.peg.1597 CDS gi|522808909|gb|ATVG01000001.1| 93458 94399 2 + 942 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65905.peg.1598 CDS gi|522808909|gb|ATVG01000001.1| 94467 95213 3 + 747 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65905.peg.1599 CDS gi|522808909|gb|ATVG01000001.1| 95554 95318 -1 - 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65905.peg.1600 CDS gi|522808909|gb|ATVG01000001.1| 96497 95712 -2 - 786 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65905.peg.1601 CDS gi|522808909|gb|ATVG01000001.1| 97790 96576 -2 - 1215 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65905.peg.1602 CDS gi|522808909|gb|ATVG01000001.1| 98912 97905 -2 - 1008 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65905.peg.1603 CDS gi|522808909|gb|ATVG01000001.1| 100235 99177 -2 - 1059 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65905.peg.1604 CDS gi|522808909|gb|ATVG01000001.1| 101271 100315 -3 - 957 Hypothetical protein UPF0052 - none -
fig|6666666.65905.peg.1605 CDS gi|522808909|gb|ATVG01000001.1| 102164 101331 -2 - 834 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.65905.peg.1606 CDS gi|522808909|gb|ATVG01000001.1| 104350 102275 -1 - 2076 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65905.peg.1607 CDS gi|522808909|gb|ATVG01000001.1| 104902 104351 -1 - 552 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65905.peg.1608 CDS gi|522808909|gb|ATVG01000001.1| 105405 104914 -3 - 492 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.65905.peg.1609 CDS gi|522808909|gb|ATVG01000001.1| 106693 105425 -1 - 1269 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65905.peg.1610 CDS gi|522808909|gb|ATVG01000001.1| 107350 106727 -1 - 624 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65905.peg.1611 CDS gi|522808909|gb|ATVG01000001.1| 108407 107361 -2 - 1047 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65905.peg.1612 CDS gi|522808909|gb|ATVG01000001.1| 110692 108413 -1 - 2280 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65905.peg.1613 CDS gi|522808909|gb|ATVG01000001.1| 111699 110689 -3 - 1011 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.65905.peg.1614 CDS gi|522808909|gb|ATVG01000001.1| 113785 111755 -1 - 2031 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65905.peg.1615 CDS gi|522808909|gb|ATVG01000001.1| 115044 113821 -3 - 1224 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65905.peg.1616 CDS gi|522808909|gb|ATVG01000001.1| 116407 115133 -1 - 1275 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65905.peg.1617 CDS gi|522808909|gb|ATVG01000001.1| 116851 116546 -1 - 306 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65905.peg.1618 CDS gi|522808909|gb|ATVG01000001.1| 117538 117035 -1 - 504 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65905.peg.1619 CDS gi|522808909|gb|ATVG01000001.1| 117939 117619 -3 - 321 integration host factor - none -
fig|6666666.65905.peg.1620 CDS gi|522808909|gb|ATVG01000001.1| 119009 118185 -2 - 825 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) Riboflavin synthesis cluster
fig|6666666.65905.peg.1621 CDS gi|522808909|gb|ATVG01000001.1| 119218 120663 1 + 1446 Cell division inhibitor Persister Cells
fig|6666666.65905.peg.1622 CDS gi|522808909|gb|ATVG01000001.1| 120752 121246 2 + 495 FIG00544983: hypothetical protein - none -
fig|6666666.65905.peg.1623 CDS gi|522808909|gb|ATVG01000001.1| 121293 121751 3 + 459 FIG00546283: hypothetical protein - none -
fig|6666666.65905.peg.1624 CDS gi|522808909|gb|ATVG01000001.1| 122633 121752 -2 - 882 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.65905.peg.1625 CDS gi|522808909|gb|ATVG01000001.1| 123124 122645 -1 - 480 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65905.peg.1626 CDS gi|522808909|gb|ATVG01000001.1| 123811 123248 -1 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65905.peg.1627 CDS gi|522808909|gb|ATVG01000001.1| 124961 123864 -2 - 1098 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65905.peg.1628 CDS gi|522808909|gb|ATVG01000001.1| 125450 124992 -2 - 459 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65905.peg.1629 CDS gi|522808909|gb|ATVG01000001.1| 126552 125455 -3 - 1098 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65905.peg.1630 CDS gi|522808909|gb|ATVG01000001.1| 127010 126549 -2 - 462 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65905.peg.1631 CDS gi|522808909|gb|ATVG01000001.1| 128310 127075 -3 - 1236 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65905.peg.1632 CDS gi|522808909|gb|ATVG01000001.1| 128819 128379 -2 - 441 signal peptidase - none -
fig|6666666.65905.peg.1633 CDS gi|522808909|gb|ATVG01000001.1| 129679 128897 -1 - 783 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65905.peg.1634 CDS gi|522808909|gb|ATVG01000001.1| 130987 129740 -1 - 1248 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65905.peg.1635 CDS gi|522808909|gb|ATVG01000001.1| 131542 130994 -1 - 549 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65905.peg.1636 CDS gi|522808909|gb|ATVG01000001.1| 134182 131561 -1 - 2622 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65905.peg.1637 CDS gi|522808909|gb|ATVG01000001.1| 134168 134290 2 + 123 hypothetical protein - none -
fig|6666666.65905.peg.1638 CDS gi|522808909|gb|ATVG01000001.1| 135680 134370 -2 - 1311 ATPase, AAA family - none -
fig|6666666.65905.peg.1639 CDS gi|522808909|gb|ATVG01000001.1| 137148 135814 -3 - 1335 FIG00544116: hypothetical protein - none -
fig|6666666.65905.peg.1640 CDS gi|522808909|gb|ATVG01000001.1| 138951 137155 -3 - 1797 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65905.peg.1641 CDS gi|522808909|gb|ATVG01000001.1| 139091 140005 2 + 915 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65905.peg.1642 CDS gi|522808909|gb|ATVG01000001.1| 140084 140713 2 + 630 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.65905.peg.1643 CDS gi|522808909|gb|ATVG01000001.1| 140865 142274 3 + 1410 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1644 CDS gi|522808909|gb|ATVG01000001.1| 143633 142350 -2 - 1284 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65905.peg.1645 CDS gi|522808909|gb|ATVG01000001.1| 144187 143639 -1 - 549 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) Glutathione: Non-redox reactions
fig|6666666.65905.peg.1646 CDS gi|522808909|gb|ATVG01000001.1| 144798 144301 -3 - 498 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.65905.peg.1647 CDS gi|522808909|gb|ATVG01000001.1| 144883 145752 1 + 870 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65905.peg.1648 CDS gi|522808909|gb|ATVG01000001.1| 145877 145999 2 + 123 hypothetical protein - none -
fig|6666666.65905.peg.1649 CDS gi|522808909|gb|ATVG01000001.1| 146054 146230 2 + 177 hypothetical protein - none -
fig|6666666.65905.peg.1650 CDS gi|522808909|gb|ATVG01000001.1| 146919 146344 -3 - 576 FIG00544222: hypothetical protein - none -
fig|6666666.65905.peg.1651 CDS gi|522808909|gb|ATVG01000001.1| 149129 147048 -2 - 2082 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.65905.peg.1652 CDS gi|522808909|gb|ATVG01000001.1| 151664 149373 -2 - 2292 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65905.peg.1653 CDS gi|522808909|gb|ATVG01000001.1| 152268 151702 -3 - 567 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65905.peg.1654 CDS gi|522808909|gb|ATVG01000001.1| 153715 152258 -1 - 1458 dipeptide-binding protein DciAE - none -
fig|6666666.65905.peg.1655 CDS gi|522808909|gb|ATVG01000001.1| 155285 154002 -2 - 1284 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65905.peg.1656 CDS gi|522808909|gb|ATVG01000001.1| 157078 155288 -1 - 1791 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65905.peg.1657 CDS gi|522808909|gb|ATVG01000001.1| 157669 157280 -1 - 390 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.65905.peg.1658 CDS gi|522808909|gb|ATVG01000001.1| 158888 157740 -2 - 1149 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65905.peg.1659 CDS gi|522808909|gb|ATVG01000001.1| 159550 158915 -1 - 636 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65905.peg.1660 CDS gi|522808909|gb|ATVG01000001.1| 160133 159558 -2 - 576 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65905.peg.1661 CDS gi|522808909|gb|ATVG01000001.1| 160997 160245 -2 - 753 FIG000859: hypothetical protein - none -
fig|6666666.65905.peg.1662 CDS gi|522808909|gb|ATVG01000001.1| 162009 161098 -3 - 912 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.65905.peg.1663 CDS gi|522808909|gb|ATVG01000001.1| 162262 163632 1 + 1371 putative integral membrane protein - none -
fig|6666666.65905.peg.1664 CDS gi|522808909|gb|ATVG01000001.1| 164141 163629 -2 - 513 FIG053954: Probable conserved membrane protein - none -
fig|6666666.65905.peg.1665 CDS gi|522808909|gb|ATVG01000001.1| 165277 164141 -1 - 1137 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.65905.peg.1666 CDS gi|522808909|gb|ATVG01000001.1| 166268 165363 -2 - 906 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.65905.peg.1667 CDS gi|522808909|gb|ATVG01000001.1| 166888 166265 -1 - 624 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) - none -
fig|6666666.65905.peg.1668 CDS gi|522808909|gb|ATVG01000001.1| 167423 166950 -2 - 474 FIG049476: HIT family protein - none -
fig|6666666.65905.peg.1669 CDS gi|522808909|gb|ATVG01000001.1| 169566 167503 -3 - 2064 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.65905.peg.1670 CDS gi|522808909|gb|ATVG01000001.1| 170957 169641 -2 - 1317 Dyp-type peroxidase family protein - none -
fig|6666666.65905.peg.1671 CDS gi|522808909|gb|ATVG01000001.1| 171647 170979 -2 - 669 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65905.peg.1672 CDS gi|522808909|gb|ATVG01000001.1| 172273 171701 -1 - 573 FIG00543909: hypothetical protein - none -
fig|6666666.65905.peg.1673 CDS gi|522808909|gb|ATVG01000001.1| 173211 172543 -3 - 669 hypothetical protein - none -
fig|6666666.65905.peg.1674 CDS gi|522808909|gb|ATVG01000001.1| 174634 175302 1 + 669 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.65905.peg.1675 CDS gi|522808909|gb|ATVG01000001.1| 175580 176671 2 + 1092 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65905.peg.1676 CDS gi|522808909|gb|ATVG01000001.1| 176668 177111 1 + 444 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65905.peg.1677 CDS gi|522808909|gb|ATVG01000001.1| 177809 177108 -2 - 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65905.peg.1678 CDS gi|522808909|gb|ATVG01000001.1| 177964 178602 1 + 639 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65905.peg.1679 CDS gi|522808909|gb|ATVG01000001.1| 178674 179942 3 + 1269 Ribonuclease D (EC 3.1.26.3) - none -
fig|6666666.65905.peg.1680 CDS gi|522808909|gb|ATVG01000001.1| 181851 179932 -3 - 1920 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65905.peg.1681 CDS gi|522808909|gb|ATVG01000001.1| 183313 182021 -1 - 1293 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.65905.peg.1682 CDS gi|522808909|gb|ATVG01000001.1| 184015 183314 -1 - 702 PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH PROTEIN - none -
fig|6666666.65905.peg.1683 CDS gi|522808909|gb|ATVG01000001.1| 184978 184016 -1 - 963 FIG00545882: hypothetical protein - none -
fig|6666666.65905.peg.1684 CDS gi|522808909|gb|ATVG01000001.1| 185574 185110 -3 - 465 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65905.peg.1685 CDS gi|522808909|gb|ATVG01000001.1| 185747 186319 2 + 573 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65905.peg.1686 CDS gi|522808909|gb|ATVG01000001.1| 186655 186365 -1 - 291 FIG00545109: hypothetical protein - none -
fig|6666666.65905.peg.1687 CDS gi|522808909|gb|ATVG01000001.1| 186805 187695 1 + 891 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65905.peg.1688 CDS gi|522808909|gb|ATVG01000001.1| 187859 189301 2 + 1443 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65905.peg.1689 CDS gi|522808909|gb|ATVG01000001.1| 189761 189408 -2 - 354 hypothetical protein - none -
fig|6666666.65905.peg.1690 CDS gi|522808909|gb|ATVG01000001.1| 191765 190050 -2 - 1716 DNA or RNA helicases of superfamily II - none -
fig|6666666.65905.peg.1691 CDS gi|522808909|gb|ATVG01000001.1| 192097 191855 -1 - 243 FIG00544358: hypothetical protein - none -
fig|6666666.65905.peg.1692 CDS gi|522808909|gb|ATVG01000001.1| 192158 192721 2 + 564 putative membrane protein - none -
fig|6666666.65905.peg.1693 CDS gi|522808909|gb|ATVG01000001.1| 192743 194368 2 + 1626 Putative transferase - none -
fig|6666666.65905.peg.1694 CDS gi|522808909|gb|ATVG01000001.1| 194386 194847 1 + 462 D-tyrosyl-tRNA(Tyr) deacylase CBSS-342610.3.peg.283;
D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65905.peg.1695 CDS gi|522808909|gb|ATVG01000001.1| 195226 196713 1 + 1488 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1696 CDS gi|522808909|gb|ATVG01000001.1| 196723 198096 1 + 1374 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1697 CDS gi|522808909|gb|ATVG01000001.1| 198584 199954 2 + 1371 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1698 CDS gi|522808909|gb|ATVG01000001.1| 199965 201338 3 + 1374 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1699 CDS gi|522808909|gb|ATVG01000001.1| 201477 202280 3 + 804 putative DNA-binding protein - none -
fig|6666666.65905.peg.1700 CDS gi|522808909|gb|ATVG01000001.1| 202489 203508 1 + 1020 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65905.peg.1701 CDS gi|522808909|gb|ATVG01000001.1| 203625 204308 3 + 684 Iron-dependent repressor IdeR/DtxR - none -
fig|6666666.65905.peg.1702 CDS gi|522808909|gb|ATVG01000001.1| 204376 205323 1 + 948 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.65905.peg.1703 CDS gi|522808909|gb|ATVG01000001.1| 206444 205320 -2 - 1125 hypothetical protein - none -
fig|6666666.65905.peg.1704 CDS gi|522808909|gb|ATVG01000001.1| 206699 207772 2 + 1074 FIG00544614: hypothetical protein - none -
fig|6666666.65905.peg.1705 CDS gi|522808909|gb|ATVG01000001.1| 207815 210358 2 + 2544 putative helicase - none -
fig|6666666.65905.peg.1706 CDS gi|522808909|gb|ATVG01000001.1| 212143 210452 -1 - 1692 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65905.peg.1707 CDS gi|522808909|gb|ATVG01000001.1| 214031 212148 -2 - 1884 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65905.peg.1708 CDS gi|522808909|gb|ATVG01000001.1| 215176 214028 -1 - 1149 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65905.peg.1709 CDS gi|522808909|gb|ATVG01000001.1| 216160 215177 -1 - 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65905.peg.1710 CDS gi|522808909|gb|ATVG01000001.1| 216378 216247 -3 - 132 hypothetical protein - none -
fig|6666666.65905.peg.1711 CDS gi|522808909|gb|ATVG01000001.1| 216940 216416 -1 - 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.65905.peg.1712 CDS gi|522808909|gb|ATVG01000001.1| 217563 216967 -3 - 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.65905.peg.1713 CDS gi|522808909|gb|ATVG01000001.1| 217712 218701 2 + 990 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65905.peg.1714 CDS gi|522808909|gb|ATVG01000001.1| 219712 218708 -1 - 1005 hypothetical membrane protein - none -
fig|6666666.65905.peg.1715 CDS gi|522808909|gb|ATVG01000001.1| 220542 219793 -3 - 750 hypothetical protein - none -
fig|6666666.65905.peg.1716 CDS gi|522808909|gb|ATVG01000001.1| 221511 220678 -3 - 834 hypothetical protein - none -
fig|6666666.65905.peg.1717 CDS gi|522808909|gb|ATVG01000001.1| 221737 225771 1 + 4035 ATP-dependent helicase HrpA - none -
fig|6666666.65905.peg.1718 CDS gi|522808909|gb|ATVG01000001.1| 226106 225786 -2 - 321 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.65905.peg.1719 CDS gi|522808909|gb|ATVG01000001.1| 226491 226339 -3 - 153 hypothetical protein - none -
fig|6666666.65905.peg.1720 CDS gi|522808909|gb|ATVG01000001.1| 226978 227697 1 + 720 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65905.peg.1721 CDS gi|522808909|gb|ATVG01000001.1| 227737 228519 1 + 783 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65905.peg.1722 CDS gi|522808909|gb|ATVG01000001.1| 230207 228516 -2 - 1692 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.65905.peg.1723 CDS gi|522808909|gb|ATVG01000001.1| 230375 231376 2 + 1002 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65905.peg.1724 CDS gi|522808909|gb|ATVG01000001.1| 231478 231744 1 + 267 Phosphocarrier protein of PTS system - none -
fig|6666666.65905.peg.1725 CDS gi|522808909|gb|ATVG01000001.1| 233107 231815 -1 - 1293 xanthine/uracil permeases - none -
fig|6666666.65905.peg.1726 CDS gi|522808909|gb|ATVG01000001.1| 234720 233215 -3 - 1506 GTP-binding protein HflX Hfl operon
fig|6666666.65905.peg.1727 CDS gi|522808909|gb|ATVG01000001.1| 234829 235611 1 + 783 FIG00546075: hypothetical protein - none -
fig|6666666.65905.peg.1728 CDS gi|522808909|gb|ATVG01000001.1| 235692 236219 3 + 528 hypothetical protein - none -
fig|6666666.65905.peg.1729 CDS gi|522808909|gb|ATVG01000001.1| 237062 236199 -2 - 864 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1730 CDS gi|522808909|gb|ATVG01000001.1| 238005 237073 -3 - 933 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.65905.peg.1731 CDS gi|522808909|gb|ATVG01000001.1| 238514 238005 -2 - 510 hypothetical protein - none -
fig|6666666.65905.peg.1732 CDS gi|522808909|gb|ATVG01000001.1| 238952 238788 -2 - 165 hypothetical protein - none -
fig|6666666.65905.peg.1733 CDS gi|522808909|gb|ATVG01000001.1| 239067 240308 3 + 1242 ATPase involved in DNA repair - none -
fig|6666666.65905.peg.1734 CDS gi|522808909|gb|ATVG01000001.1| 240298 241566 1 + 1269 No significant database matches - none -
fig|6666666.65905.peg.1735 CDS gi|522808909|gb|ATVG01000001.1| 242214 241606 -3 - 609 FIG00544570: hypothetical protein - none -
fig|6666666.65905.peg.1736 CDS gi|522808909|gb|ATVG01000001.1| 243773 242217 -2 - 1557 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases
fig|6666666.65905.peg.1737 CDS gi|522808909|gb|ATVG01000001.1| 244446 243838 -3 - 609 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65905.peg.1738 CDS gi|522808909|gb|ATVG01000001.1| 245611 244457 -1 - 1155 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65905.peg.1739 CDS gi|522808909|gb|ATVG01000001.1| 245997 245782 -3 - 216 FIG00545605: hypothetical protein - none -
fig|6666666.65905.peg.1740 CDS gi|522808909|gb|ATVG01000001.1| 246101 246706 2 + 606 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65905.peg.1741 CDS gi|522808909|gb|ATVG01000001.1| 246709 247404 1 + 696 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65905.peg.1742 CDS gi|522808909|gb|ATVG01000001.1| 247445 248062 2 + 618 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65905.peg.1743 CDS gi|522808909|gb|ATVG01000001.1| 248953 248072 -1 - 882 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65905.peg.1744 CDS gi|522808909|gb|ATVG01000001.1| 249352 249077 -1 - 276 putative transcription regulator - none -
fig|6666666.65905.peg.1745 CDS gi|522808909|gb|ATVG01000001.1| 250118 249543 -2 - 576 Protein Implicated in DNA repair function with RecA and MutS DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.65905.peg.1746 CDS gi|522808909|gb|ATVG01000001.1| 250739 250125 -2 - 615 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) - none -
fig|6666666.65905.peg.1747 CDS gi|522808909|gb|ATVG01000001.1| 250772 251065 2 + 294 hypothetical protein - none -
fig|6666666.65905.peg.1748 CDS gi|522808909|gb|ATVG01000001.1| 252205 251087 -1 - 1119 Integral membrane protein TerC - none -
fig|6666666.65905.peg.1749 CDS gi|522808909|gb|ATVG01000001.1| 255727 252416 -1 - 3312 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65905.peg.1750 CDS gi|522808909|gb|ATVG01000001.1| 256750 256124 -1 - 627 FIG00544433: hypothetical protein - none -
fig|6666666.65905.peg.1751 CDS gi|522808909|gb|ATVG01000001.1| 259009 256841 -1 - 2169 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.65905.peg.1752 CDS gi|522808909|gb|ATVG01000001.1| 259920 259012 -3 - 909 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65905.peg.1753 CDS gi|522808909|gb|ATVG01000001.1| 260756 260001 -2 - 756 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65905.peg.1754 CDS gi|522808909|gb|ATVG01000001.1| 261506 260760 -2 - 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65905.peg.1755 CDS gi|522808909|gb|ATVG01000001.1| 263880 261616 -3 - 2265 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65905.peg.1756 CDS gi|522808909|gb|ATVG01000001.1| 264316 264047 -1 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.65905.peg.1757 CDS gi|522808909|gb|ATVG01000001.1| 265401 264436 -3 - 966 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65905.peg.1758 CDS gi|522808909|gb|ATVG01000001.1| 266471 265431 -2 - 1041 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65905.peg.1759 CDS gi|522808909|gb|ATVG01000001.1| 266511 267497 3 + 987 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses
fig|6666666.65905.peg.1760 CDS gi|522808909|gb|ATVG01000001.1| 268574 267906 -2 - 669 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.65905.peg.1761 CDS gi|522808909|gb|ATVG01000001.1| 269445 268567 -3 - 879 putative SimX4 homolog - none -
fig|6666666.65905.peg.1762 CDS gi|522808909|gb|ATVG01000001.1| 270793 269492 -1 - 1302 putative DNA-damage-inducible protein F - none -
fig|6666666.65905.peg.1763 CDS gi|522808909|gb|ATVG01000001.1| 271777 270794 -1 - 984 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.65905.peg.1764 CDS gi|522808909|gb|ATVG01000001.1| 272223 271780 -3 - 444 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65905.peg.1765 CDS gi|522808909|gb|ATVG01000001.1| 275256 272401 -3 - 2856 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65905.peg.1766 CDS gi|522808909|gb|ATVG01000001.1| 275715 275389 -3 - 327 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65905.peg.1767 CDS gi|522808909|gb|ATVG01000001.1| 276913 275900 -1 - 1014 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65905.peg.1768 CDS gi|522808909|gb|ATVG01000001.1| 277422 276916 -3 - 507 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.65905.peg.1769 CDS gi|522808909|gb|ATVG01000001.1| 277529 278494 2 + 966 hypothetical protein - none -
fig|6666666.65905.peg.1770 CDS gi|522808909|gb|ATVG01000001.1| 278507 278755 2 + 249 hypothetical protein - none -
fig|6666666.65905.peg.1771 CDS gi|522808909|gb|ATVG01000001.1| 278966 279304 2 + 339 FIG00545313: hypothetical protein - none -
fig|6666666.65905.peg.1772 CDS gi|522808909|gb|ATVG01000001.1| 279687 279319 -3 - 369 FIG00546884: hypothetical protein - none -
fig|6666666.65905.peg.1773 CDS gi|522808909|gb|ATVG01000001.1| 281465 279708 -2 - 1758 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65905.peg.1774 CDS gi|522808909|gb|ATVG01000001.1| 281464 282288 1 + 825 UPF0246 protein YaaA - none -
fig|6666666.65905.peg.1775 CDS gi|522808909|gb|ATVG01000001.1| 282574 282296 -1 - 279 hypothetical protein - none -
fig|6666666.65905.peg.1776 CDS gi|522808909|gb|ATVG01000001.1| 283382 282651 -2 - 732 hypothetical protein - none -
fig|6666666.65905.peg.1777 CDS gi|522808909|gb|ATVG01000001.1| 284306 283404 -2 - 903 ABC transporter, ATP-binding protein - none -
fig|6666666.65905.peg.1778 CDS gi|522808909|gb|ATVG01000001.1| 285163 284369 -1 - 795 putative two-component system response regulator - none -
fig|6666666.65905.peg.1779 CDS gi|522808909|gb|ATVG01000001.1| 286333 285188 -1 - 1146 two-component system sensor kinase - none -
fig|6666666.65905.peg.1780 CDS gi|522808909|gb|ATVG01000001.1| 286586 287917 2 + 1332 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.65905.peg.1781 CDS gi|522808909|gb|ATVG01000001.1| 289491 287992 -3 - 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65905.peg.1782 CDS gi|522808909|gb|ATVG01000001.1| 289829 290794 2 + 966 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65905.peg.1783 CDS gi|522808909|gb|ATVG01000001.1| 290845 292233 1 + 1389 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65905.peg.1784 CDS gi|522808909|gb|ATVG01000001.1| 293113 292283 -1 - 831 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65905.peg.1785 CDS gi|522808909|gb|ATVG01000001.1| 294290 293223 -2 - 1068 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65905.peg.1786 CDS gi|522808909|gb|ATVG01000001.1| 295683 294475 -3 - 1209 Membrane-associated zinc metalloprotease - none -
fig|6666666.65905.peg.1787 CDS gi|522808909|gb|ATVG01000001.1| 296867 295701 -2 - 1167 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65905.peg.1788 CDS gi|522808909|gb|ATVG01000001.1| 297016 297534 1 + 519 hypothetical membrane protein - none -
fig|6666666.65905.peg.1789 CDS gi|522808909|gb|ATVG01000001.1| 298751 297639 -2 - 1113 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.65905.peg.1790 CDS gi|522808909|gb|ATVG01000001.1| 299819 298842 -2 - 978 Phosphatidate cytidylyltransferase (EC 2.7.7.41) - none -
fig|6666666.65905.peg.1791 CDS gi|522808909|gb|ATVG01000001.1| 300491 299934 -2 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65905.peg.1792 CDS gi|522808909|gb|ATVG01000001.1| 301304 300555 -2 - 750 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65905.peg.1793 CDS gi|522808909|gb|ATVG01000001.1| 302353 301541 -1 - 813 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65905.peg.1794 CDS gi|522808909|gb|ATVG01000001.1| 303435 302551 -3 - 885 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.65905.peg.1795 CDS gi|522808909|gb|ATVG01000001.1| 304181 304474 2 + 294 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.65905.peg.1796 CDS gi|522808909|gb|ATVG01000001.1| 305352 304486 -3 - 867 Tyrosine recombinase XerC - none -
fig|6666666.65905.peg.1797 CDS gi|522808909|gb|ATVG01000001.1| 306632 305445 -2 - 1188 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65905.peg.1798 CDS gi|522808909|gb|ATVG01000001.1| 308296 306638 -1 - 1659 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65905.peg.1799 CDS gi|522808909|gb|ATVG01000001.1| 308576 308283 -2 - 294 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.65905.peg.1800 CDS gi|522808909|gb|ATVG01000001.1| 309245 308925 -2 - 321 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65905.peg.1801 CDS gi|522808909|gb|ATVG01000001.1| 310024 309374 -1 - 651 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.65905.peg.1802 CDS gi|522808909|gb|ATVG01000001.1| 310738 310025 -1 - 714 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65905.peg.1803 CDS gi|522808909|gb|ATVG01000001.1| 311555 310788 -2 - 768 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65905.peg.1804 CDS gi|522808909|gb|ATVG01000001.1| 312102 311758 -3 - 345 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65905.peg.1805 CDS gi|522808909|gb|ATVG01000001.1| 312380 314218 2 + 1839 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.65905.peg.1806 CDS gi|522808909|gb|ATVG01000001.1| 314284 315453 1 + 1170 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1807 CDS gi|522808909|gb|ATVG01000001.1| 315468 316154 3 + 687 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65905.peg.1808 CDS gi|522808909|gb|ATVG01000001.1| 316158 317285 3 + 1128 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65905.peg.1809 CDS gi|522808909|gb|ATVG01000001.1| 317282 317476 2 + 195 hypothetical protein - none -
fig|6666666.65905.peg.1810 CDS gi|522808909|gb|ATVG01000001.1| 317491 318273 1 + 783 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65905.peg.1811 CDS gi|522808909|gb|ATVG01000001.1| 318308 319450 2 + 1143 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65905.peg.1812 CDS gi|522808909|gb|ATVG01000001.1| 320535 319531 -3 - 1005 hypothetical protein - none -
fig|6666666.65905.peg.1813 CDS gi|522808909|gb|ATVG01000001.1| 321852 320539 -3 - 1314 Poly-gamma-glutamate synthase subunit PgsB/CapB (EC 6.3.2.-) - none -
fig|6666666.65905.peg.1814 CDS gi|522808909|gb|ATVG01000001.1| 323712 321967 -3 - 1746 Gamma-glutamyltranspeptidase (EC 2.3.2.2) - none -
fig|6666666.65905.peg.1815 CDS gi|522808909|gb|ATVG01000001.1| 326525 324171 -2 - 2355 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65905.peg.1816 CDS gi|522808909|gb|ATVG01000001.1| 326978 326616 -2 - 363 hypothetical protein - none -
fig|6666666.65905.peg.1817 CDS gi|522808909|gb|ATVG01000001.1| 327870 326962 -3 - 909 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.65905.peg.1818 CDS gi|522808909|gb|ATVG01000001.1| 328367 327867 -2 - 501 16S rRNA processing protein RimM - none -
fig|6666666.65905.peg.1819 CDS gi|522808909|gb|ATVG01000001.1| 329039 328515 -2 - 525 SSU ribosomal protein S16p - none -
fig|6666666.65905.peg.1820 CDS gi|522808909|gb|ATVG01000001.1| 329393 331936 2 + 2544 O-antigen acetylase - none -
fig|6666666.65905.peg.1821 CDS gi|522808909|gb|ATVG01000001.1| 333741 332089 -3 - 1653 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65905.peg.1822 CDS gi|522808909|gb|ATVG01000001.1| 334302 333913 -3 - 390 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65905.peg.1823 CDS gi|522808909|gb|ATVG01000001.1| 334560 334303 -3 - 258 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65905.peg.1824 CDS gi|522808909|gb|ATVG01000001.1| 334997 334560 -2 - 438 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65905.peg.1825 CDS gi|522808909|gb|ATVG01000001.1| 336676 334997 -1 - 1680 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65905.peg.1826 CDS gi|522808909|gb|ATVG01000001.1| 337023 336676 -3 - 348 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65905.peg.1827 CDS gi|522808909|gb|ATVG01000001.1| 339966 337024 -3 - 2943 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65905.peg.1828 CDS gi|522808909|gb|ATVG01000001.1| 341965 340193 -1 - 1773 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65905.peg.1829 CDS gi|522808909|gb|ATVG01000001.1| 345527 342015 -2 - 3513 Chromosome partition protein smc - none -
fig|6666666.65905.peg.1830 CDS gi|522808909|gb|ATVG01000001.1| 345848 345555 -2 - 294 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65905.peg.1831 CDS gi|522808909|gb|ATVG01000001.1| 347354 345867 -2 - 1488 amino acid carrier protein - none -
fig|6666666.65905.peg.1832 CDS gi|522808909|gb|ATVG01000001.1| 348233 347391 -2 - 843 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65905.peg.1833 CDS gi|522808909|gb|ATVG01000001.1| 349028 348252 -2 - 777 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65905.peg.1834 CDS gi|522808909|gb|ATVG01000001.1| 349579 349025 -1 - 555 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65905.peg.1835 CDS gi|522808909|gb|ATVG01000001.1| 349869 350465 3 + 597 hypothetical protein - none -
fig|6666666.65905.peg.1836 CDS gi|522808909|gb|ATVG01000001.1| 351367 350567 -1 - 801 Cell division initiation protein - none -
fig|6666666.65905.peg.1837 CDS gi|522808909|gb|ATVG01000001.1| 353466 351457 -3 - 2010 putative secreted protein - none -
fig|6666666.65905.peg.1838 CDS gi|522808909|gb|ATVG01000001.1| 353802 354911 3 + 1110 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65905.peg.1839 CDS gi|522808909|gb|ATVG01000001.1| 355329 354958 -3 - 372 hypothetical protein - none -
fig|6666666.65905.peg.1840 CDS gi|522808909|gb|ATVG01000001.1| 355391 356647 2 + 1257 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65905.peg.1841 CDS gi|522808909|gb|ATVG01000001.1| 356719 359205 1 + 2487 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65905.peg.1842 CDS gi|522808909|gb|ATVG01000001.1| 360689 359265 -2 - 1425 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65905.peg.1843 CDS gi|522808909|gb|ATVG01000001.1| 361673 360753 -2 - 921 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65905.peg.1844 CDS gi|522808909|gb|ATVG01000001.1| 362570 361737 -2 - 834 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65905.peg.1845 CDS gi|522808909|gb|ATVG01000001.1| 363356 362757 -2 - 600 FIG00545012: hypothetical protein - none -
fig|6666666.65905.peg.1846 CDS gi|522808909|gb|ATVG01000001.1| 364234 363440 -1 - 795 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) - none -
fig|6666666.65905.peg.1847 CDS gi|522808909|gb|ATVG01000001.1| 364957 364295 -1 - 663 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65905.peg.1848 CDS gi|522808909|gb|ATVG01000001.1| 365848 365123 -1 - 726 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) - none -
fig|6666666.65905.peg.1849 CDS gi|522808909|gb|ATVG01000001.1| 367159 365852 -1 - 1308 putative transport protein - none -
fig|6666666.65905.peg.1850 CDS gi|522808909|gb|ATVG01000001.1| 367320 367156 -3 - 165 hypothetical protein - none -
fig|6666666.65905.peg.1851 CDS gi|522808909|gb|ATVG01000001.1| 367843 367385 -1 - 459 hypothetical membrane protein - none -
fig|6666666.65905.peg.1852 CDS gi|522808909|gb|ATVG01000001.1| 368608 367904 -1 - 705 hypothetical protein - none -
fig|6666666.65905.peg.1853 CDS gi|522808909|gb|ATVG01000001.1| 368967 369545 3 + 579 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.65905.peg.1854 CDS gi|522808909|gb|ATVG01000001.1| 370439 371779 2 + 1341 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65905.peg.1855 CDS gi|522808909|gb|ATVG01000001.1| 371869 373311 1 + 1443 DNA polymerase III epsilon subunit (EC 2.7.7.7) - none -
fig|6666666.65905.peg.1856 CDS gi|522808909|gb|ATVG01000001.1| 373395 374237 3 + 843 hypothetical protein - none -
fig|6666666.65905.peg.1857 CDS gi|522808909|gb|ATVG01000001.1| 374257 375282 1 + 1026 FIG00544169: hypothetical protein - none -
fig|6666666.65905.peg.1858 CDS gi|522808909|gb|ATVG01000001.1| 376196 375327 -2 - 870 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.65905.peg.1859 CDS gi|522808909|gb|ATVG01000001.1| 376451 376200 -2 - 252 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.65905.peg.1860 CDS gi|522808909|gb|ATVG01000001.1| 378612 376522 -3 - 2091 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.65905.peg.1861 CDS gi|522808909|gb|ATVG01000001.1| 379325 378981 -2 - 345 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65905.peg.1862 CDS gi|522808909|gb|ATVG01000001.1| 379630 379388 -1 - 243 FIG00544856: hypothetical protein - none -
fig|6666666.65905.peg.1863 CDS gi|522808909|gb|ATVG01000001.1| 380304 379666 -3 - 639 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.65905.peg.1864 CDS gi|522808909|gb|ATVG01000001.1| 381518 380313 -2 - 1206 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.65905.peg.1865 CDS gi|522808909|gb|ATVG01000001.1| 385169 381585 -2 - 3585 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65905.peg.1866 CDS gi|522808909|gb|ATVG01000001.1| 385871 385212 -2 - 660 hypothetical protein - none -
fig|6666666.65905.peg.1867 CDS gi|522808909|gb|ATVG01000001.1| 386743 385868 -1 - 876 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65905.peg.1868 CDS gi|522808909|gb|ATVG01000001.1| 387245 386781 -2 - 465 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65905.peg.1869 CDS gi|522808909|gb|ATVG01000001.1| 387434 388315 2 + 882 hypothetical protein - none -
fig|6666666.65905.peg.1870 CDS gi|522808909|gb|ATVG01000001.1| 389040 388339 -3 - 702 Putative secreted protein - none -
fig|6666666.65905.peg.1871 CDS gi|522808909|gb|ATVG01000001.1| 389206 390231 1 + 1026 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65905.peg.1872 CDS gi|522808909|gb|ATVG01000001.1| 391649 390240 -2 - 1410 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65905.peg.1873 CDS gi|522808909|gb|ATVG01000001.1| 394876 391685 -1 - 3192 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65905.peg.1874 CDS gi|522808909|gb|ATVG01000001.1| 395394 395188 -3 - 207 hypothetical protein - none -
fig|6666666.65905.peg.1875 CDS gi|522808909|gb|ATVG01000001.1| 396626 395526 -2 - 1101 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.65905.peg.1876 CDS gi|522808909|gb|ATVG01000001.1| 397188 396895 -3 - 294 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65905.peg.1877 CDS gi|522808909|gb|ATVG01000001.1| 397744 397253 -1 - 492 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65905.peg.1878 CDS gi|522808909|gb|ATVG01000001.1| 398570 397866 -2 - 705 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65905.peg.1879 CDS gi|522808909|gb|ATVG01000001.1| 399357 398563 -3 - 795 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65905.peg.1880 CDS gi|522808909|gb|ATVG01000001.1| 400724 399393 -2 - 1332 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65905.peg.1881 CDS gi|522808909|gb|ATVG01000001.1| 401639 400941 -2 - 699 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65905.peg.1882 CDS gi|522808909|gb|ATVG01000001.1| 403102 401639 -1 - 1464 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65905.peg.1883 CDS gi|522808909|gb|ATVG01000001.1| 404241 403123 -3 - 1119 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65905.peg.1884 CDS gi|522808909|gb|ATVG01000001.1| 405856 404252 -1 - 1605 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65905.peg.1885 CDS gi|522808909|gb|ATVG01000001.1| 407321 405894 -2 - 1428 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65905.peg.1886 CDS gi|522808909|gb|ATVG01000001.1| 408470 407364 -2 - 1107 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65905.peg.1887 CDS gi|522808909|gb|ATVG01000001.1| 410164 408572 -1 - 1593 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65905.peg.1888 CDS gi|522808909|gb|ATVG01000001.1| 411780 410161 -3 - 1620 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65905.peg.1889 CDS gi|522808909|gb|ATVG01000001.1| 413653 411800 -1 - 1854 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65905.peg.1890 CDS gi|522808909|gb|ATVG01000001.1| 414921 413962 -3 - 960 FIG00544004: hypothetical protein - none -
fig|6666666.65905.peg.1891 CDS gi|522808909|gb|ATVG01000001.1| 416070 415063 -3 - 1008 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65905.peg.1892 CDS gi|522808909|gb|ATVG01000001.1| 416735 416301 -2 - 435 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65905.peg.1893 CDS gi|522808909|gb|ATVG01000001.1| 417673 417260 -1 - 414 FIG017342: transmembrane protein - none -
fig|6666666.65905.peg.1894 CDS gi|522808909|gb|ATVG01000001.1| 418275 417817 -3 - 459 hypothetical protein - none -
fig|6666666.65905.peg.1895 CDS gi|522808909|gb|ATVG01000001.1| 418581 419084 3 + 504 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65905.peg.1896 CDS gi|522808909|gb|ATVG01000001.1| 419095 420186 1 + 1092 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.65905.peg.1897 CDS gi|522808909|gb|ATVG01000001.1| 420210 421754 3 + 1545 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65905.peg.1898 CDS gi|522808909|gb|ATVG01000001.1| 422088 421723 -3 - 366 Conserved hypothetical regulatory protein - none -
fig|6666666.65905.peg.1899 CDS gi|522808909|gb|ATVG01000001.1| 422145 423605 3 + 1461 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65905.peg.1900 CDS gi|522808909|gb|ATVG01000001.1| 425008 423602 -1 - 1407 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65905.peg.1901 CDS gi|522808909|gb|ATVG01000001.1| 425546 425034 -2 - 513 FIG00994909: hypothetical protein - none -
fig|6666666.65905.peg.1902 CDS gi|522808909|gb|ATVG01000001.1| 426779 425601 -2 - 1179 hypothetical membrane protein - none -
fig|6666666.65905.peg.1903 CDS gi|522808909|gb|ATVG01000001.1| 427604 426873 -2 - 732 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) - none -
fig|6666666.65905.peg.1904 CDS gi|522808909|gb|ATVG01000001.1| 428668 427685 -1 - 984 ROK family protein (putative glucokinase) - none -
fig|6666666.65905.peg.1905 CDS gi|522808909|gb|ATVG01000001.1| 429826 428702 -1 - 1125 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65905.peg.1906 CDS gi|522808909|gb|ATVG01000001.1| 430952 429873 -2 - 1080 putative secreted protein - none -
fig|6666666.65905.peg.1907 CDS gi|522808909|gb|ATVG01000001.1| 431870 431238 -2 - 633 putative secreted protein - none -
fig|6666666.65905.peg.1908 CDS gi|522808909|gb|ATVG01000001.1| 434162 432540 -2 - 1623 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65905.peg.1909 CDS gi|522808909|gb|ATVG01000001.1| 435382 434162 -1 - 1221 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65905.peg.1910 CDS gi|522808909|gb|ATVG01000001.1| 436278 435379 -3 - 900 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65905.peg.1911 CDS gi|522808909|gb|ATVG01000001.1| 436896 436351 -3 - 546 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65905.peg.1912 CDS gi|522808909|gb|ATVG01000001.1| 437942 437511 -2 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.65905.peg.1913 CDS gi|522808909|gb|ATVG01000001.1| 439052 437955 -2 - 1098 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65905.peg.1914 CDS gi|522808909|gb|ATVG01000001.1| 439053 439340 3 + 288 hypothetical protein - none -
fig|6666666.65905.peg.1915 CDS gi|522808909|gb|ATVG01000001.1| 439490 441412 2 + 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65905.peg.1916 CDS gi|522808909|gb|ATVG01000001.1| 441872 441528 -2 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65905.peg.1917 CDS gi|522808909|gb|ATVG01000001.1| 442049 442810 2 + 762 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65905.peg.1918 CDS gi|522808909|gb|ATVG01000001.1| 442856 443932 2 + 1077 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.65905.peg.1919 CDS gi|522808909|gb|ATVG01000001.1| 445032 443929 -3 - 1104 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65905.peg.1920 CDS gi|522808909|gb|ATVG01000001.1| 445173 446774 3 + 1602 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65905.peg.1921 CDS gi|522808909|gb|ATVG01000001.1| 447057 446779 -3 - 279 Putative oxidoreductase - none -
fig|6666666.65905.peg.1922 CDS gi|522808909|gb|ATVG01000001.1| 447311 447189 -2 - 123 hypothetical protein - none -
fig|6666666.65905.peg.1923 CDS gi|522808909|gb|ATVG01000001.1| 447310 449475 1 + 2166 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.65905.peg.1924 CDS gi|522808909|gb|ATVG01000001.1| 449720 452596 2 + 2877 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65905.peg.1925 CDS gi|522808909|gb|ATVG01000001.1| 452623 453735 1 + 1113 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65905.peg.1926 CDS gi|522808909|gb|ATVG01000001.1| 453800 454216 2 + 417 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65905.peg.1927 CDS gi|522808909|gb|ATVG01000001.1| 454403 455236 2 + 834 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65905.peg.1928 CDS gi|522808909|gb|ATVG01000001.1| 455281 456411 1 + 1131 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65905.peg.1929 CDS gi|522808909|gb|ATVG01000001.1| 456472 457266 1 + 795 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65905.peg.1930 CDS gi|522808909|gb|ATVG01000001.1| 457647 457324 -3 - 324 FIG00543905: hypothetical protein - none -
fig|6666666.65905.peg.1931 CDS gi|522808909|gb|ATVG01000001.1| 457924 459360 1 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65905.peg.1932 CDS gi|522808909|gb|ATVG01000001.1| 459939 459412 -3 - 528 MutT/nudix family protein - none -
fig|6666666.65905.peg.1933 CDS gi|522808909|gb|ATVG01000001.1| 460997 459939 -2 - 1059 FIG00544982: hypothetical protein - none -
fig|6666666.65905.peg.1934 CDS gi|522808909|gb|ATVG01000001.1| 461112 460960 -3 - 153 hypothetical protein - none -
fig|6666666.65905.peg.1935 CDS gi|522808909|gb|ATVG01000001.1| 462572 461118 -2 - 1455 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65905.peg.1936 CDS gi|522808909|gb|ATVG01000001.1| 462970 462584 -1 - 387 hypothetical protein - none -
fig|6666666.65905.peg.1937 CDS gi|522808909|gb|ATVG01000001.1| 463530 463105 -3 - 426 hypothetical protein - none -
fig|6666666.65905.peg.1938 CDS gi|522808909|gb|ATVG01000001.1| 466688 463581 -2 - 3108 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.65905.peg.1939 CDS gi|522808909|gb|ATVG01000001.1| 468068 466716 -2 - 1353 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65905.peg.1940 CDS gi|522808909|gb|ATVG01000001.1| 468255 469310 3 + 1056 hypothetical protein - none -
fig|6666666.65905.peg.1941 CDS gi|522808909|gb|ATVG01000001.1| 469386 471119 3 + 1734 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65905.peg.1942 CDS gi|522808909|gb|ATVG01000001.1| 471332 471120 -2 - 213 hypothetical protein - none -
fig|6666666.65905.peg.1943 CDS gi|522808909|gb|ATVG01000001.1| 471615 472889 3 + 1275 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.65905.peg.1944 CDS gi|522808909|gb|ATVG01000001.1| 474298 472886 -1 - 1413 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65905.peg.1945 CDS gi|522808909|gb|ATVG01000001.1| 476040 474817 -3 - 1224 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.65905.peg.1946 CDS gi|522808909|gb|ATVG01000001.1| 476809 476081 -1 - 729 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.65905.peg.1947 CDS gi|522808909|gb|ATVG01000001.1| 478027 476825 -1 - 1203 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.65905.peg.1948 CDS gi|522808909|gb|ATVG01000001.1| 478130 478621 2 + 492 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.65905.peg.1949 CDS gi|522808909|gb|ATVG01000001.1| 478628 479608 2 + 981 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65905.peg.1950 CDS gi|522808909|gb|ATVG01000001.1| 480666 479629 -3 - 1038 Putative iron-siderophore uptake system exported solute-binding component - none -
fig|6666666.65905.peg.1951 CDS gi|522808909|gb|ATVG01000001.1| 480902 481858 2 + 957 Ferric enterobactin transport system permease protein FepD (TC 3.A.1.14.2) - none -
fig|6666666.65905.peg.1952 CDS gi|522808909|gb|ATVG01000001.1| 482035 482856 1 + 822 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.65905.peg.1953 CDS gi|522808909|gb|ATVG01000001.1| 482968 483711 1 + 744 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65905.peg.1954 CDS gi|522808909|gb|ATVG01000001.1| 483887 484144 2 + 258 hypothetical protein - none -
fig|6666666.65905.peg.1955 CDS gi|522808909|gb|ATVG01000001.1| 484901 484470 -2 - 432 FIG00544601: hypothetical protein - none -
fig|6666666.65905.peg.1956 CDS gi|522808909|gb|ATVG01000001.1| 485191 487950 1 + 2760 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65905.peg.1957 CDS gi|522808909|gb|ATVG01000001.1| 488079 488411 3 + 333 Acyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.65905.peg.1958 CDS gi|522808909|gb|ATVG01000001.1| 488902 488408 -1 - 495 FIG00544844: hypothetical protein - none -
fig|6666666.65905.peg.1959 CDS gi|522808909|gb|ATVG01000001.1| 489823 489095 -1 - 729 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65905.peg.1960 CDS gi|522808909|gb|ATVG01000001.1| 491814 489976 -3 - 1839 FIG00545514: hypothetical protein - none -
fig|6666666.65905.peg.1961 CDS gi|522808909|gb|ATVG01000001.1| 495178 495059 -1 - 120 hypothetical protein - none -
fig|6666666.65905.peg.1962 CDS gi|522808909|gb|ATVG01000001.1| 496376 496239 -2 - 138 hypothetical protein - none -
fig|6666666.65905.rna.1 RNA gi|522808867|gb|ATVG01000024.1| 2313 2385 3 + 73 tRNA-Ala-CGC tRNAs
fig|6666666.65905.rna.2 RNA gi|522808868|gb|ATVG01000023.1| 2058 1 -3 - 2058 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65905.rna.3 RNA gi|522808868|gb|ATVG01000023.1| 4009 2526 -1 - 1484 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65905.rna.4 RNA gi|522808869|gb|ATVG01000022.1| 4675 4603 -1 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.65905.rna.5 RNA gi|522808869|gb|ATVG01000022.1| 4767 4694 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.65905.rna.6 RNA gi|522808877|gb|ATVG01000020.1| 9829 9916 1 + 88 tRNA-Ser-CGA tRNAs
fig|6666666.65905.rna.7 RNA gi|522808881|gb|ATVG01000018.1| 136 257 1 + 122 5S RNA - none -
fig|6666666.65905.rna.8 RNA gi|522808881|gb|ATVG01000018.1| 8121 8193 3 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65905.rna.9 RNA gi|522808881|gb|ATVG01000018.1| 27527 27607 2 + 81 tRNA-Leu-TAG - none -
fig|6666666.65905.rna.10 RNA gi|522808883|gb|ATVG01000017.1| 548 463 -2 - 86 tRNA-Ser-GGA tRNAs
fig|6666666.65905.rna.11 RNA gi|522808885|gb|ATVG01000016.1| 32390 32318 -2 - 73 tRNA-Lys-CTT - none -
fig|6666666.65905.rna.12 RNA gi|522808887|gb|ATVG01000015.1| 10719 10647 -3 - 73 tRNA-His-GTG - none -
fig|6666666.65905.rna.13 RNA gi|522808887|gb|ATVG01000015.1| 15656 15583 -2 - 74 tRNA-Arg-TCT - none -
fig|6666666.65905.rna.14 RNA gi|522808889|gb|ATVG01000014.1| 194 1 -2 - 194 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65905.rna.15 RNA gi|522808889|gb|ATVG01000014.1| 32425 32498 1 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.65905.rna.16 RNA gi|522808891|gb|ATVG01000013.1| 40748 40821 2 + 74 tRNA-Met-CAT - none -
fig|6666666.65905.rna.17 RNA gi|522808893|gb|ATVG01000012.1| 417 344 -3 - 74 tRNA-Pro-CGG tRNAs
fig|6666666.65905.rna.18 RNA gi|522808893|gb|ATVG01000012.1| 30806 30878 2 + 73 tRNA-Thr-CGT - none -
fig|6666666.65905.rna.19 RNA gi|522808895|gb|ATVG01000011.1| 224 345 2 + 122 5S RNA - none -
fig|6666666.65905.rna.20 RNA gi|522808896|gb|ATVG01000010.1| 41981 42063 2 + 83 tRNA-Tyr-GTA - none -
fig|6666666.65905.rna.21 RNA gi|522808896|gb|ATVG01000010.1| 42539 42611 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.65905.rna.22 RNA gi|522808896|gb|ATVG01000010.1| 42656 42727 2 + 72 tRNA-Met-CAT - none -
fig|6666666.65905.rna.23 RNA gi|522808896|gb|ATVG01000010.1| 42836 42908 2 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.65905.rna.24 RNA gi|522808897|gb|ATVG01000009.1| 147 1 -3 - 147 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65905.rna.25 RNA gi|522808897|gb|ATVG01000009.1| 89486 89559 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.65905.rna.26 RNA gi|522808897|gb|ATVG01000009.1| 89575 89647 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.65905.rna.27 RNA gi|522808901|gb|ATVG01000008.1| 390 319 -3 - 72 tRNA-Gly-TCC - none -
fig|6666666.65905.rna.28 RNA gi|522808901|gb|ATVG01000008.1| 1734 1807 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.65905.rna.29 RNA gi|522808901|gb|ATVG01000008.1| 97692 97619 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.65905.rna.30 RNA gi|522808901|gb|ATVG01000008.1| 99720 99792 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.65905.rna.31 RNA gi|522808902|gb|ATVG01000007.1| 27326 27410 2 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.65905.rna.32 RNA gi|522808902|gb|ATVG01000007.1| 95109 95193 3 + 85 tRNA-Ser-TGA - none -
fig|6666666.65905.rna.33 RNA gi|522808902|gb|ATVG01000007.1| 100219 100307 1 + 89 tRNA-Ser-GCT - none -
fig|6666666.65905.rna.34 RNA gi|522808902|gb|ATVG01000007.1| 101860 101932 1 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65905.rna.35 RNA gi|522808903|gb|ATVG01000006.1| 405 332 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.65905.rna.36 RNA gi|522808903|gb|ATVG01000006.1| 497 425 -2 - 73 tRNA-Glu-TTC - none -
fig|6666666.65905.rna.37 RNA gi|522808903|gb|ATVG01000006.1| 1322 1250 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.65905.rna.38 RNA gi|522808903|gb|ATVG01000006.1| 47430 47358 -3 - 73 tRNA-Thr-TGT - none -
fig|6666666.65905.rna.39 RNA gi|522808904|gb|ATVG01000005.1| 339 267 -3 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65905.rna.40 RNA gi|522808904|gb|ATVG01000005.1| 142197 142267 3 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.65905.rna.41 RNA gi|522808905|gb|ATVG01000004.1| 33906 33833 -3 - 74 tRNA-Leu-TAA - none -
fig|6666666.65905.rna.42 RNA gi|522808905|gb|ATVG01000004.1| 48678 48608 -3 - 71 tRNA-Gln-TTG - none -
fig|6666666.65905.rna.43 RNA gi|522808905|gb|ATVG01000004.1| 148194 148266 3 + 73 tRNA-Arg-CCT - none -
fig|6666666.65905.rna.44 RNA gi|522808905|gb|ATVG01000004.1| 177781 177660 -1 - 122 5S RNA - none -
fig|6666666.65905.rna.45 RNA gi|522808908|gb|ATVG01000002.1| 20309 20237 -2 - 73 tRNA-Glu-CTC - none -
fig|6666666.65905.rna.46 RNA gi|522808908|gb|ATVG01000002.1| 21726 21654 -3 - 73 tRNA-Glu-CTC - none -
fig|6666666.65905.rna.47 RNA gi|522808908|gb|ATVG01000002.1| 21833 21762 -2 - 72 tRNA-Gln-CTG - none -
fig|6666666.65905.rna.48 RNA gi|522808908|gb|ATVG01000002.1| 110745 110818 3 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.65905.rna.49 RNA gi|522808908|gb|ATVG01000002.1| 189922 189832 -1 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.65905.rna.50 RNA gi|522808909|gb|ATVG01000001.1| 350 277 -2 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.65905.rna.51 RNA gi|522808909|gb|ATVG01000001.1| 54474 54559 3 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.65905.rna.52 RNA gi|522808909|gb|ATVG01000001.1| 173526 173454 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65905.rna.53 RNA gi|522808909|gb|ATVG01000001.1| 173649 173578 -3 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65905.rna.54 RNA gi|522808909|gb|ATVG01000001.1| 173748 173678 -3 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.65905.rna.55 RNA gi|522808909|gb|ATVG01000001.1| 173853 173781 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65905.rna.56 RNA gi|522808909|gb|ATVG01000001.1| 173980 173909 -1 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65905.rna.57 RNA gi|522808909|gb|ATVG01000001.1| 174086 174014 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65905.rna.58 RNA gi|522808909|gb|ATVG01000001.1| 174359 174430 2 + 72 tRNA-Val-CAC tRNAs
fig|6666666.65905.rna.59 RNA gi|522808909|gb|ATVG01000001.1| 484386 484314 -3 - 73 tRNA-Val-TAC - none -