fig|6666666.65907.peg.1 CDS gi|333351941|gb|AFIZ01000066.1| 158 406 2 + 249 hypothetical protein - none -
fig|6666666.65907.peg.2 CDS gi|333351942|gb|AFIZ01000065.1| 988 38 -1 - 951 Mobile element protein - none -
fig|6666666.65907.peg.3 CDS gi|333351942|gb|AFIZ01000065.1| 1287 985 -3 - 303 Mobile element protein - none -
fig|6666666.65907.peg.4 CDS gi|333351943|gb|AFIZ01000064.1| 117 368 3 + 252 Transposase for IS3513 - none -
fig|6666666.65907.peg.5 CDS gi|333351943|gb|AFIZ01000064.1| 365 1306 2 + 942 Mobile element protein - none -
fig|6666666.65907.peg.6 CDS gi|333351944|gb|AFIZ01000063.1| 121 1365 1 + 1245 Transposase - none -
fig|6666666.65907.peg.7 CDS gi|333351945|gb|AFIZ01000062.1| 1327 14 -1 - 1314 Mobile element protein - none -
fig|6666666.65907.peg.8 CDS gi|333351946|gb|AFIZ01000061.1| 1345 14 -1 - 1332 Mobile element protein - none -
fig|6666666.65907.peg.9 CDS gi|333351948|gb|AFIZ01000059.1| 1385 162 -2 - 1224 Mobile element protein - none -
fig|6666666.65907.peg.10 CDS gi|333351950|gb|AFIZ01000057.1| 2082 49 -3 - 2034 Mobile element protein - none -
fig|6666666.65907.peg.11 CDS gi|333351951|gb|AFIZ01000056.1| 1263 4 -3 - 1260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65907.peg.12 CDS gi|333351951|gb|AFIZ01000056.1| 2163 1318 -3 - 846 Putative transcriptional regulator - none -
fig|6666666.65907.peg.13 CDS gi|333351951|gb|AFIZ01000056.1| 2956 2384 -1 - 573 hypothetical protein - none -
fig|6666666.65907.peg.14 CDS gi|333351951|gb|AFIZ01000056.1| 3726 2941 -3 - 786 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.15 CDS gi|333351951|gb|AFIZ01000056.1| 3852 4787 3 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65907.peg.16 CDS gi|333351951|gb|AFIZ01000056.1| 4970 5554 2 + 585 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65907.peg.17 CDS gi|333351951|gb|AFIZ01000056.1| 7538 6423 -2 - 1116 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65907.peg.18 CDS gi|333351951|gb|AFIZ01000056.1| 8002 7535 -1 - 468 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65907.peg.19 CDS gi|333351951|gb|AFIZ01000056.1| 8477 7995 -2 - 483 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65907.peg.20 CDS gi|333351951|gb|AFIZ01000056.1| 8992 8474 -1 - 519 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65907.peg.21 CDS gi|333351951|gb|AFIZ01000056.1| 9073 9351 1 + 279 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65907.peg.22 CDS gi|333351951|gb|AFIZ01000056.1| 9358 9963 1 + 606 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.65907.peg.23 CDS gi|333351951|gb|AFIZ01000056.1| 9960 11216 3 + 1257 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65907.peg.24 CDS gi|333351951|gb|AFIZ01000056.1| 11672 12595 2 + 924 hypothetical protein - none -
fig|6666666.65907.peg.25 CDS gi|333351951|gb|AFIZ01000056.1| 13696 12836 -1 - 861 formate/nitrite transporter family protein - none -
fig|6666666.65907.peg.26 CDS gi|333351951|gb|AFIZ01000056.1| 14445 13963 -3 - 483 similar to DBJ:BAB55450.1 (AB051073) percent identity 45 in 140 aa - none -
fig|6666666.65907.peg.27 CDS gi|333351951|gb|AFIZ01000056.1| 15455 14442 -2 - 1014 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65907.peg.28 CDS gi|333351951|gb|AFIZ01000056.1| 16776 15547 -3 - 1230 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65907.peg.29 CDS gi|333351951|gb|AFIZ01000056.1| 17598 16792 -3 - 807 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.65907.peg.30 CDS gi|333351951|gb|AFIZ01000056.1| 18420 17614 -3 - 807 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.65907.peg.31 CDS gi|333351951|gb|AFIZ01000056.1| 18604 19659 1 + 1056 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65907.peg.32 CDS gi|333351951|gb|AFIZ01000056.1| 19850 20137 2 + 288 hypothetical protein - none -
fig|6666666.65907.peg.33 CDS gi|333351951|gb|AFIZ01000056.1| 20547 20341 -3 - 207 hypothetical protein - none -
fig|6666666.65907.peg.34 CDS gi|333351952|gb|AFIZ01000055.1| 371 132 -2 - 240 hypothetical protein - none -
fig|6666666.65907.peg.35 CDS gi|333351952|gb|AFIZ01000055.1| 463 1794 1 + 1332 putative lysozyme precursor - none -
fig|6666666.65907.peg.36 CDS gi|333351952|gb|AFIZ01000055.1| 2656 1832 -1 - 825 FIG00543993: hypothetical protein - none -
fig|6666666.65907.peg.37 CDS gi|333351952|gb|AFIZ01000055.1| 2967 2656 -3 - 312 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65907.peg.38 CDS gi|333351952|gb|AFIZ01000055.1| 3686 3033 -2 - 654 L-lysine permease - none -
fig|6666666.65907.peg.39 CDS gi|333351952|gb|AFIZ01000055.1| 5260 3707 -1 - 1554 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.40 CDS gi|333351952|gb|AFIZ01000055.1| 9865 5261 -1 - 4605 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.41 CDS gi|333351952|gb|AFIZ01000055.1| 9917 10111 2 + 195 hypothetical protein - none -
fig|6666666.65907.peg.42 CDS gi|333351952|gb|AFIZ01000055.1| 10233 10955 3 + 723 hypothetical protein - none -
fig|6666666.65907.peg.43 CDS gi|333351952|gb|AFIZ01000055.1| 11064 11720 3 + 657 predicted protein - none -
fig|6666666.65907.peg.45 CDS gi|333351952|gb|AFIZ01000055.1| 14393 13110 -2 - 1284 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria
fig|6666666.65907.peg.46 CDS gi|333351952|gb|AFIZ01000055.1| 14592 15527 3 + 936 O-antigen export system permease protein RfbD - none -
fig|6666666.65907.peg.47 CDS gi|333351952|gb|AFIZ01000055.1| 15539 16327 2 + 789 O-antigen export system, ATP-binding protein - none -
fig|6666666.65907.peg.48 CDS gi|333351952|gb|AFIZ01000055.1| 16340 16849 2 + 510 GCN5-related N-acetyltransferase - none -
fig|6666666.65907.peg.49 CDS gi|333351952|gb|AFIZ01000055.1| 18110 16881 -2 - 1230 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), plant type - none -
fig|6666666.65907.peg.50 CDS gi|333351952|gb|AFIZ01000055.1| 18263 19198 2 + 936 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65907.peg.51 CDS gi|333351952|gb|AFIZ01000055.1| 19838 19416 -2 - 423 FIG00544442: hypothetical protein - none -
fig|6666666.65907.peg.52 CDS gi|333351952|gb|AFIZ01000055.1| 20496 19828 -3 - 669 FIG00544022: hypothetical protein - none -
fig|6666666.65907.peg.53 CDS gi|333351952|gb|AFIZ01000055.1| 21756 20605 -3 - 1152 FIG00545331: hypothetical protein - none -
fig|6666666.65907.peg.54 CDS gi|333351952|gb|AFIZ01000055.1| 22626 21967 -3 - 660 hypothetical protein - none -
fig|6666666.65907.peg.55 CDS gi|333351952|gb|AFIZ01000055.1| 23258 22635 -2 - 624 hypothetical protein - none -
fig|6666666.65907.peg.56 CDS gi|333351952|gb|AFIZ01000055.1| 23344 23739 1 + 396 FIG00543901: hypothetical protein - none -
fig|6666666.65907.peg.57 CDS gi|333351952|gb|AFIZ01000055.1| 26904 23773 -3 - 3132 hypothetical protein - none -
fig|6666666.65907.peg.58 CDS gi|333351952|gb|AFIZ01000055.1| 29270 27087 -2 - 2184 hypothetical protein - none -
fig|6666666.65907.peg.59 CDS gi|333351952|gb|AFIZ01000055.1| 29486 30901 2 + 1416 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65907.peg.60 CDS gi|333351952|gb|AFIZ01000055.1| 30930 31688 3 + 759 oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65907.peg.61 CDS gi|333351952|gb|AFIZ01000055.1| 32196 31942 -3 - 255 hypothetical protein - none -
fig|6666666.65907.peg.62 CDS gi|333351952|gb|AFIZ01000055.1| 33020 32412 -2 - 609 DUF1541 domain-containing protein - none -
fig|6666666.65907.peg.63 CDS gi|333351952|gb|AFIZ01000055.1| 33202 33077 -1 - 126 hypothetical protein - none -
fig|6666666.65907.peg.64 CDS gi|333351952|gb|AFIZ01000055.1| 33612 33815 3 + 204 Copper chaperone Copper homeostasis
fig|6666666.65907.peg.65 CDS gi|333351952|gb|AFIZ01000055.1| 33840 36200 3 + 2361 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65907.peg.66 CDS gi|333351952|gb|AFIZ01000055.1| 36928 36452 -1 - 477 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65907.peg.67 CDS gi|333351952|gb|AFIZ01000055.1| 38016 36937 -3 - 1080 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65907.peg.68 CDS gi|333351952|gb|AFIZ01000055.1| 38135 38473 2 + 339 putative transcription regulator - none -
fig|6666666.65907.peg.69 CDS gi|333351952|gb|AFIZ01000055.1| 38478 39527 3 + 1050 monooxygenase, putative - none -
fig|6666666.65907.peg.70 CDS gi|333351952|gb|AFIZ01000055.1| 40662 39571 -3 - 1092 NAD(P)H-dependent 2-cyclohexen-1-one reductase - none -
fig|6666666.65907.peg.71 CDS gi|333351952|gb|AFIZ01000055.1| 42092 40725 -2 - 1368 hypothetical protein - none -
fig|6666666.65907.peg.72 CDS gi|333351952|gb|AFIZ01000055.1| 43502 42195 -2 - 1308 Lipase 1 (EC 3.1.1.3) - none -
fig|6666666.65907.peg.73 CDS gi|333351952|gb|AFIZ01000055.1| 45083 43716 -2 - 1368 Lipase 1 (EC 3.1.1.3) - none -
fig|6666666.65907.peg.74 CDS gi|333351952|gb|AFIZ01000055.1| 47438 45138 -2 - 2301 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.65907.peg.75 CDS gi|333351953|gb|AFIZ01000054.1| 1276 5 -1 - 1272 hypothetical protein - none -
fig|6666666.65907.peg.76 CDS gi|333351953|gb|AFIZ01000054.1| 2235 1273 -3 - 963 putative ABC transporter, ATP-binding protein - none -
fig|6666666.65907.peg.77 CDS gi|333351953|gb|AFIZ01000054.1| 2948 2232 -2 - 717 ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.78 CDS gi|333351953|gb|AFIZ01000054.1| 3319 2945 -1 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.65907.peg.79 CDS gi|333351953|gb|AFIZ01000054.1| 3496 4872 1 + 1377 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65907.peg.80 CDS gi|333351953|gb|AFIZ01000054.1| 4922 6979 2 + 2058 putative membrane protein - none -
fig|6666666.65907.peg.81 CDS gi|333351953|gb|AFIZ01000054.1| 7014 10469 3 + 3456 putative arabinosyltransferase - none -
fig|6666666.65907.peg.82 CDS gi|333351953|gb|AFIZ01000054.1| 10497 12608 3 + 2112 putative endopeptidase - none -
fig|6666666.65907.peg.83 CDS gi|333351953|gb|AFIZ01000054.1| 12619 13452 1 + 834 hypothetical protein - none -
fig|6666666.65907.peg.84 CDS gi|333351953|gb|AFIZ01000054.1| 13449 14633 3 + 1185 putative integral membrane protein - none -
fig|6666666.65907.peg.85 CDS gi|333351954|gb|AFIZ01000053.1| 272 856 2 + 585 hypothetical protein - none -
fig|6666666.65907.peg.86 CDS gi|333351954|gb|AFIZ01000053.1| 3486 1765 -3 - 1722 monooxygenase, flavin-binding family - none -
fig|6666666.65907.peg.87 CDS gi|333351955|gb|AFIZ01000052.1| 1379 1561 2 + 183 hypothetical protein - none -
fig|6666666.65907.peg.88 CDS gi|333351955|gb|AFIZ01000052.1| 1865 3070 2 + 1206 hypothetical protein - none -
fig|6666666.65907.peg.89 CDS gi|333351955|gb|AFIZ01000052.1| 5197 3071 -1 - 2127 Ubiquinone biosynthesis monooxygenase UbiB - none -
fig|6666666.65907.peg.90 CDS gi|333351955|gb|AFIZ01000052.1| 5261 6592 2 + 1332 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) - none -
fig|6666666.65907.peg.91 CDS gi|333351955|gb|AFIZ01000052.1| 6585 6866 3 + 282 hypothetical protein - none -
fig|6666666.65907.peg.92 CDS gi|333351955|gb|AFIZ01000052.1| 7450 8562 1 + 1113 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65907.peg.93 CDS gi|333351955|gb|AFIZ01000052.1| 8633 9793 2 + 1161 secreted lipase - none -
fig|6666666.65907.peg.94 CDS gi|333351955|gb|AFIZ01000052.1| 9921 10697 3 + 777 short chain dehydrogenase - none -
fig|6666666.65907.peg.95 CDS gi|333351955|gb|AFIZ01000052.1| 10764 11780 3 + 1017 secreted lipase - none -
fig|6666666.65907.peg.96 CDS gi|333351955|gb|AFIZ01000052.1| 12993 11797 -3 - 1197 hypothetical protein - none -
fig|6666666.65907.peg.97 CDS gi|333351955|gb|AFIZ01000052.1| 14750 13017 -2 - 1734 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.98 CDS gi|333351955|gb|AFIZ01000052.1| 14724 14903 3 + 180 hypothetical protein - none -
fig|6666666.65907.peg.99 CDS gi|333351955|gb|AFIZ01000052.1| 15038 16357 2 + 1320 Major myo-inositol transporter IolT - none -
fig|6666666.65907.peg.100 CDS gi|333351955|gb|AFIZ01000052.1| 16426 17298 1 + 873 putative ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.101 CDS gi|333351955|gb|AFIZ01000052.1| 17295 18083 3 + 789 putative membrane protein [KO:K01992] - none -
fig|6666666.65907.peg.102 CDS gi|333351955|gb|AFIZ01000052.1| 18080 19192 2 + 1113 putative two-component system sensor kinase - none -
fig|6666666.65907.peg.103 CDS gi|333351955|gb|AFIZ01000052.1| 19189 19806 1 + 618 putative two-component system response regulator - none -
fig|6666666.65907.peg.104 CDS gi|333351955|gb|AFIZ01000052.1| 19991 20698 2 + 708 hypothetical protein - none -
fig|6666666.65907.peg.105 CDS gi|333351955|gb|AFIZ01000052.1| 20858 21472 2 + 615 hypothetical protein - none -
fig|6666666.65907.peg.106 CDS gi|333351955|gb|AFIZ01000052.1| 22637 21429 -2 - 1209 probable multidrug resistance transporter, MFS superfamily - none -
fig|6666666.65907.peg.107 CDS gi|333351955|gb|AFIZ01000052.1| 22905 23195 3 + 291 hypothetical protein - none -
fig|6666666.65907.peg.108 CDS gi|333351955|gb|AFIZ01000052.1| 23167 23457 1 + 291 hypothetical protein - none -
fig|6666666.65907.peg.109 CDS gi|333351955|gb|AFIZ01000052.1| 24227 24667 2 + 441 hypothetical protein - none -
fig|6666666.65907.peg.110 CDS gi|333351955|gb|AFIZ01000052.1| 24660 25472 3 + 813 hypothetical protein - none -
fig|6666666.65907.peg.111 CDS gi|333351955|gb|AFIZ01000052.1| 26389 25478 -1 - 912 hypothetical protein - none -
fig|6666666.65907.peg.112 CDS gi|333351955|gb|AFIZ01000052.1| 26430 26609 3 + 180 hypothetical protein - none -
fig|6666666.65907.peg.113 CDS gi|333351956|gb|AFIZ01000051.1| 1354 806 -1 - 549 Mobile element protein - none -
fig|6666666.65907.peg.114 CDS gi|333351956|gb|AFIZ01000051.1| 2135 1866 -2 - 270 hypothetical protein - none -
fig|6666666.65907.peg.115 CDS gi|333351956|gb|AFIZ01000051.1| 2234 4393 2 + 2160 FIG00998424: hypothetical protein - none -
fig|6666666.65907.peg.116 CDS gi|333351956|gb|AFIZ01000051.1| 4429 4854 1 + 426 hypothetical protein - none -
fig|6666666.65907.peg.117 CDS gi|333351956|gb|AFIZ01000051.1| 5097 5408 3 + 312 Mobile element protein - none -
fig|6666666.65907.peg.118 CDS gi|333351956|gb|AFIZ01000051.1| 5429 6361 2 + 933 Mobile element protein - none -
fig|6666666.65907.peg.119 CDS gi|333351956|gb|AFIZ01000051.1| 6421 7233 1 + 813 Transcriptional regulator, LysR family CBSS-349102.4.peg.3442
fig|6666666.65907.peg.120 CDS gi|333351957|gb|AFIZ01000050.1| 760 1026 1 + 267 hypothetical protein - none -
fig|6666666.65907.peg.121 CDS gi|333351957|gb|AFIZ01000050.1| 1268 2104 2 + 837 hypothetical protein - none -
fig|6666666.65907.peg.122 CDS gi|333351957|gb|AFIZ01000050.1| 2160 2672 3 + 513 Glutathione peroxidase (EC 1.11.1.9) Glutathione: Redox cycle
fig|6666666.65907.peg.123 CDS gi|333351957|gb|AFIZ01000050.1| 3353 2715 -2 - 639 hypothetical protein - none -
fig|6666666.65907.peg.124 CDS gi|333351957|gb|AFIZ01000050.1| 4935 3541 -3 - 1395 Glutamate decarboxylase (EC 4.1.1.15) - none -
fig|6666666.65907.peg.125 CDS gi|333351957|gb|AFIZ01000050.1| 5017 5139 1 + 123 hypothetical protein - none -
fig|6666666.65907.peg.126 CDS gi|333351957|gb|AFIZ01000050.1| 5228 5920 2 + 693 hypothetical protein - none -
fig|6666666.65907.peg.127 CDS gi|333351957|gb|AFIZ01000050.1| 7489 5966 -1 - 1524 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.128 CDS gi|333351957|gb|AFIZ01000050.1| 7582 8211 1 + 630 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.129 CDS gi|333351957|gb|AFIZ01000050.1| 8208 9902 3 + 1695 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.65907.peg.130 CDS gi|333351957|gb|AFIZ01000050.1| 10277 10468 2 + 192 hypothetical protein - none -
fig|6666666.65907.peg.131 CDS gi|333351957|gb|AFIZ01000050.1| 10670 11362 2 + 693 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.132 CDS gi|333351957|gb|AFIZ01000050.1| 12929 11376 -2 - 1554 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.65907.peg.133 CDS gi|333351957|gb|AFIZ01000050.1| 14687 13179 -2 - 1509 Drug resistance transporter EmrB/QacA subfamily - none -
fig|6666666.65907.peg.134 CDS gi|333351957|gb|AFIZ01000050.1| 15776 14967 -2 - 810 FIG00546585: hypothetical protein - none -
fig|6666666.65907.peg.135 CDS gi|333351957|gb|AFIZ01000050.1| 16166 15783 -2 - 384 Thioredoxin - none -
fig|6666666.65907.peg.136 CDS gi|333351957|gb|AFIZ01000050.1| 16346 16861 2 + 516 hypothetical protein - none -
fig|6666666.65907.peg.137 CDS gi|333351957|gb|AFIZ01000050.1| 17618 16866 -2 - 753 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.138 CDS gi|333351957|gb|AFIZ01000050.1| 18361 17813 -1 - 549 Protein yceI precursor - none -
fig|6666666.65907.peg.139 CDS gi|333351957|gb|AFIZ01000050.1| 18509 19009 2 + 501 Transcriptional regulator, MarR family - none -
fig|6666666.65907.peg.140 CDS gi|333351957|gb|AFIZ01000050.1| 20534 19044 -2 - 1491 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65907.peg.141 CDS gi|333351957|gb|AFIZ01000050.1| 20637 20813 3 + 177 hypothetical protein - none -
fig|6666666.65907.peg.142 CDS gi|333351957|gb|AFIZ01000050.1| 21792 21340 -3 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65907.peg.143 CDS gi|333351957|gb|AFIZ01000050.1| 22473 21838 -3 - 636 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65907.peg.144 CDS gi|333351957|gb|AFIZ01000050.1| 22812 22522 -3 - 291 SSU ribosomal protein S6p - none -
fig|6666666.65907.peg.145 CDS gi|333351957|gb|AFIZ01000050.1| 23205 23020 -3 - 186 hypothetical protein - none -
fig|6666666.65907.peg.146 CDS gi|333351957|gb|AFIZ01000050.1| 25433 23202 -2 - 2232 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65907.peg.147 CDS gi|333351957|gb|AFIZ01000050.1| 25866 25426 -3 - 441 hypothetical protein - none -
fig|6666666.65907.peg.148 CDS gi|333351957|gb|AFIZ01000050.1| 25989 27086 3 + 1098 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.65907.peg.149 CDS gi|333351957|gb|AFIZ01000050.1| 27254 27745 2 + 492 Transcriptional regulator, MarR family - none -
fig|6666666.65907.peg.150 CDS gi|333351957|gb|AFIZ01000050.1| 27750 28742 3 + 993 Universal stress protein family - none -
fig|6666666.65907.peg.151 CDS gi|333351957|gb|AFIZ01000050.1| 28798 29127 1 + 330 hypothetical protein - none -
fig|6666666.65907.peg.152 CDS gi|333351957|gb|AFIZ01000050.1| 30271 29183 -1 - 1089 hypothetical protein - none -
fig|6666666.65907.peg.153 CDS gi|333351957|gb|AFIZ01000050.1| 33678 30808 -3 - 2871 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65907.peg.154 CDS gi|333351957|gb|AFIZ01000050.1| 33700 34239 1 + 540 putative tryptophan transpoter - none -
fig|6666666.65907.peg.155 CDS gi|333351957|gb|AFIZ01000050.1| 34423 35388 1 + 966 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65907.peg.156 CDS gi|333351957|gb|AFIZ01000050.1| 35408 36400 2 + 993 Sodium - Bile acid symporter CBSS-349102.4.peg.3442
fig|6666666.65907.peg.157 CDS gi|333351957|gb|AFIZ01000050.1| 37867 36410 -1 - 1458 hypothetical protein - none -
fig|6666666.65907.peg.158 CDS gi|333351957|gb|AFIZ01000050.1| 38412 37855 -3 - 558 MUTT/NUDIX FAMILY PROTEIN - none -
fig|6666666.65907.peg.159 CDS gi|333351957|gb|AFIZ01000050.1| 38479 39486 1 + 1008 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.65907.peg.160 CDS gi|333351957|gb|AFIZ01000050.1| 39548 39667 2 + 120 hypothetical protein - none -
fig|6666666.65907.peg.161 CDS gi|333351957|gb|AFIZ01000050.1| 40052 39681 -2 - 372 hypothetical membrane protein - none -
fig|6666666.65907.peg.162 CDS gi|333351957|gb|AFIZ01000050.1| 40846 40049 -1 - 798 Branched-chain amino acid transport protein azlC - none -
fig|6666666.65907.peg.163 CDS gi|333351957|gb|AFIZ01000050.1| 42318 40843 -3 - 1476 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65907.peg.164 CDS gi|333351957|gb|AFIZ01000050.1| 42434 42961 2 + 528 MutT/nudix family protein - none -
fig|6666666.65907.peg.165 CDS gi|333351957|gb|AFIZ01000050.1| 42978 45494 3 + 2517 probable secreted protein. - none -
fig|6666666.65907.peg.166 CDS gi|333351957|gb|AFIZ01000050.1| 45503 49075 2 + 3573 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65907.peg.167 CDS gi|333351957|gb|AFIZ01000050.1| 49177 49530 1 + 354 hypothetical protein - none -
fig|6666666.65907.peg.168 CDS gi|333351957|gb|AFIZ01000050.1| 49617 50357 3 + 741 hypothetical protein - none -
fig|6666666.65907.peg.169 CDS gi|333351957|gb|AFIZ01000050.1| 50397 51341 3 + 945 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.65907.peg.170 CDS gi|333351957|gb|AFIZ01000050.1| 51480 51803 3 + 324 Thioredoxin - none -
fig|6666666.65907.peg.171 CDS gi|333351957|gb|AFIZ01000050.1| 51825 53009 3 + 1185 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.65907.peg.172 CDS gi|333351957|gb|AFIZ01000050.1| 53768 53025 -2 - 744 FIG007808: hypothetical protein - none -
fig|6666666.65907.peg.173 CDS gi|333351957|gb|AFIZ01000050.1| 55002 53872 -3 - 1131 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65907.peg.174 CDS gi|333351957|gb|AFIZ01000050.1| 55961 54999 -2 - 963 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65907.peg.175 CDS gi|333351957|gb|AFIZ01000050.1| 56664 56014 -3 - 651 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.65907.peg.176 CDS gi|333351957|gb|AFIZ01000050.1| 58119 56794 -3 - 1326 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster
fig|6666666.65907.peg.177 CDS gi|333351957|gb|AFIZ01000050.1| 58746 58429 -3 - 318 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.65907.peg.178 CDS gi|333351957|gb|AFIZ01000050.1| 59019 58876 -3 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.65907.peg.179 CDS gi|333351957|gb|AFIZ01000050.1| 59750 61588 2 + 1839 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65907.peg.180 CDS gi|333351957|gb|AFIZ01000050.1| 63910 65100 1 + 1191 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65907.peg.181 CDS gi|333351957|gb|AFIZ01000050.1| 65105 66367 2 + 1263 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65907.peg.182 CDS gi|333351957|gb|AFIZ01000050.1| 66364 66936 1 + 573 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65907.peg.183 CDS gi|333351957|gb|AFIZ01000050.1| 67067 66954 -2 - 114 hypothetical protein - none -
fig|6666666.65907.peg.184 CDS gi|333351957|gb|AFIZ01000050.1| 67023 69086 3 + 2064 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65907.peg.185 CDS gi|333351957|gb|AFIZ01000050.1| 69103 69984 1 + 882 FIG00544157: hypothetical protein - none -
fig|6666666.65907.peg.186 CDS gi|333351957|gb|AFIZ01000050.1| 71456 70056 -2 - 1401 possible transcriptional regulator, ROK family - none -
fig|6666666.65907.peg.187 CDS gi|333351957|gb|AFIZ01000050.1| 71601 72836 3 + 1236 Alkanesulfonate monooxygenase (EC 1.14.14.5) Alkanesulfonates Utilization
fig|6666666.65907.peg.188 CDS gi|333351957|gb|AFIZ01000050.1| 73001 73894 2 + 894 taurine transport system permease protein - none -
fig|6666666.65907.peg.189 CDS gi|333351957|gb|AFIZ01000050.1| 73906 75042 1 + 1137 hypothetical protein - none -
fig|6666666.65907.peg.190 CDS gi|333351957|gb|AFIZ01000050.1| 75039 75908 3 + 870 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component - none -
fig|6666666.65907.peg.191 CDS gi|333351957|gb|AFIZ01000050.1| 76115 76510 2 + 396 hypothetical protein - none -
fig|6666666.65907.peg.192 CDS gi|333351957|gb|AFIZ01000050.1| 77575 76694 -1 - 882 siderophore-interacting protein - none -
fig|6666666.65907.peg.193 CDS gi|333351957|gb|AFIZ01000050.1| 77670 80207 3 + 2538 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65907.peg.194 CDS gi|333351957|gb|AFIZ01000050.1| 80218 80757 1 + 540 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65907.peg.195 CDS gi|333351957|gb|AFIZ01000050.1| 81344 82636 2 + 1293 Poly-gamma-glutamate synthase subunit PgsB/CapB (EC 6.3.2.-) - none -
fig|6666666.65907.peg.196 CDS gi|333351957|gb|AFIZ01000050.1| 82633 83634 1 + 1002 Poly-gamma-glutamate synthase subunit PgsC/CapC (EC 6.3.2.-) - none -
fig|6666666.65907.peg.197 CDS gi|333351957|gb|AFIZ01000050.1| 83625 85340 3 + 1716 hypothetical protein - none -
fig|6666666.65907.peg.198 CDS gi|333351957|gb|AFIZ01000050.1| 86218 85337 -1 - 882 Putative secreted hydrolase - none -
fig|6666666.65907.peg.199 CDS gi|333351957|gb|AFIZ01000050.1| 87113 86238 -2 - 876 Putative secreted hydrolase - none -
fig|6666666.65907.peg.200 CDS gi|333351957|gb|AFIZ01000050.1| 87567 89231 3 + 1665 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.201 CDS gi|333351957|gb|AFIZ01000050.1| 93081 91420 -3 - 1662 hypothetical protein - none -
fig|6666666.65907.peg.202 CDS gi|333351957|gb|AFIZ01000050.1| 94145 93270 -2 - 876 hypothetical protein - none -
fig|6666666.65907.peg.203 CDS gi|333351957|gb|AFIZ01000050.1| 94914 95399 3 + 486 hypothetical protein - none -
fig|6666666.65907.peg.204 CDS gi|333351957|gb|AFIZ01000050.1| 96429 96130 -3 - 300 hypothetical protein - none -
fig|6666666.65907.peg.205 CDS gi|333351957|gb|AFIZ01000050.1| 97464 96493 -3 - 972 hypothetical protein - none -
fig|6666666.65907.peg.206 CDS gi|333351958|gb|AFIZ01000049.1| 1462 194 -1 - 1269 hypothetical protein - none -
fig|6666666.65907.peg.207 CDS gi|333351958|gb|AFIZ01000049.1| 2908 1505 -1 - 1404 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65907.peg.208 CDS gi|333351958|gb|AFIZ01000049.1| 3129 3794 3 + 666 hypothetical protein - none -
fig|6666666.65907.peg.209 CDS gi|333351958|gb|AFIZ01000049.1| 3812 4483 2 + 672 hypothetical protein - none -
fig|6666666.65907.peg.210 CDS gi|333351958|gb|AFIZ01000049.1| 5407 4598 -1 - 810 hypothetical protein - none -
fig|6666666.65907.peg.211 CDS gi|333351959|gb|AFIZ01000048.1| 2385 259 -3 - 2127 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.65907.peg.212 CDS gi|333351959|gb|AFIZ01000048.1| 2425 3858 1 + 1434 carboxylesterase - none -
fig|6666666.65907.peg.213 CDS gi|333351959|gb|AFIZ01000048.1| 3926 5122 2 + 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.214 CDS gi|333351959|gb|AFIZ01000048.1| 5119 7086 1 + 1968 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65907.peg.215 CDS gi|333351959|gb|AFIZ01000048.1| 7349 7140 -2 - 210 hypothetical protein - none -
fig|6666666.65907.peg.216 CDS gi|333351959|gb|AFIZ01000048.1| 7368 7517 3 + 150 hypothetical protein - none -
fig|6666666.65907.peg.217 CDS gi|333351959|gb|AFIZ01000048.1| 8362 7505 -1 - 858 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.218 CDS gi|333351959|gb|AFIZ01000048.1| 9536 8859 -2 - 678 hypothetical protein - none -
fig|6666666.65907.peg.219 CDS gi|333351959|gb|AFIZ01000048.1| 9632 10186 2 + 555 hypothetical protein - none -
fig|6666666.65907.peg.220 CDS gi|333351959|gb|AFIZ01000048.1| 11189 10197 -2 - 993 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65907.peg.221 CDS gi|333351959|gb|AFIZ01000048.1| 11755 11207 -1 - 549 hypothetical protein - none -
fig|6666666.65907.peg.222 CDS gi|333351959|gb|AFIZ01000048.1| 11907 12212 3 + 306 hypothetical protein - none -
fig|6666666.65907.peg.223 CDS gi|333351959|gb|AFIZ01000048.1| 12780 12205 -3 - 576 hypothetical protein - none -
fig|6666666.65907.peg.224 CDS gi|333351959|gb|AFIZ01000048.1| 13665 12790 -3 - 876 Far-related protein - none -
fig|6666666.65907.peg.225 CDS gi|333351959|gb|AFIZ01000048.1| 13763 14653 2 + 891 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.226 CDS gi|333351959|gb|AFIZ01000048.1| 14725 15618 1 + 894 Putative phosphotransferase system protein - none -
fig|6666666.65907.peg.227 CDS gi|333351959|gb|AFIZ01000048.1| 15629 17242 2 + 1614 Putative integral membrane protein - none -
fig|6666666.65907.peg.228 CDS gi|333351959|gb|AFIZ01000048.1| 17253 18179 3 + 927 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.229 CDS gi|333351959|gb|AFIZ01000048.1| 18202 18801 1 + 600 putative transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.230 CDS gi|333351959|gb|AFIZ01000048.1| 18850 20019 1 + 1170 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65907.peg.231 CDS gi|333351959|gb|AFIZ01000048.1| 20019 21269 3 + 1251 Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX) - none -
fig|6666666.65907.peg.232 CDS gi|333351959|gb|AFIZ01000048.1| 21329 22774 2 + 1446 amino acid permease-associated region - none -
fig|6666666.65907.peg.233 CDS gi|333351959|gb|AFIZ01000048.1| 23445 22816 -3 - 630 hypothetical protein - none -
fig|6666666.65907.peg.234 CDS gi|333351959|gb|AFIZ01000048.1| 23696 25111 2 + 1416 drug resistance transporter, EmrB/QacA family - none -
fig|6666666.65907.peg.235 CDS gi|333351959|gb|AFIZ01000048.1| 25182 26063 3 + 882 hypothetical protein - none -
fig|6666666.65907.peg.236 CDS gi|333351959|gb|AFIZ01000048.1| 26688 26044 -3 - 645 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) Protein-L-isoaspartate O-methyltransferase;
Stationary phase repair cluster
fig|6666666.65907.peg.237 CDS gi|333351959|gb|AFIZ01000048.1| 27203 26775 -2 - 429 Organic hydroperoxide resistance protein CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.65907.peg.238 CDS gi|333351959|gb|AFIZ01000048.1| 28962 27430 -3 - 1533 Ammonium transporter Ammonia assimilation
fig|6666666.65907.peg.239 CDS gi|333351959|gb|AFIZ01000048.1| 31303 29045 -1 - 2259 putative membrane protein - none -
fig|6666666.65907.peg.240 CDS gi|333351959|gb|AFIZ01000048.1| 31413 32108 3 + 696 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.241 CDS gi|333351959|gb|AFIZ01000048.1| 33423 32137 -3 - 1287 Ammonium transporter Ammonia assimilation
fig|6666666.65907.peg.242 CDS gi|333351959|gb|AFIZ01000048.1| 34767 33631 -3 - 1137 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65907.peg.243 CDS gi|333351959|gb|AFIZ01000048.1| 36187 34868 -1 - 1320 Believed to be an alternative form of N-formylglutamate deformylase (EC 3.5.1.68), but experimentally invalidated - none -
fig|6666666.65907.peg.244 CDS gi|333351959|gb|AFIZ01000048.1| 36321 37532 3 + 1212 Sarcosine oxidase beta subunit (EC 1.5.3.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65907.peg.245 CDS gi|333351959|gb|AFIZ01000048.1| 37690 38355 1 + 666 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.65907.peg.246 CDS gi|333351959|gb|AFIZ01000048.1| 38360 39208 2 + 849 COG2071: predicted glutamine amidotransferases in hypothetical Actinobacterial gene cluster - none -
fig|6666666.65907.peg.247 CDS gi|333351959|gb|AFIZ01000048.1| 39295 39540 1 + 246 hypothetical protein - none -
fig|6666666.65907.peg.248 CDS gi|333351960|gb|AFIZ01000047.1| 2831 105 -2 - 2727 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65907.peg.249 CDS gi|333351960|gb|AFIZ01000047.1| 2909 3607 2 + 699 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.250 CDS gi|333351960|gb|AFIZ01000047.1| 5008 3761 -1 - 1248 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.251 CDS gi|333351960|gb|AFIZ01000047.1| 5074 5988 1 + 915 putative secreted protein - none -
fig|6666666.65907.peg.252 CDS gi|333351960|gb|AFIZ01000047.1| 5985 6917 3 + 933 putative amino acid ABC transporter permease protein - none -
fig|6666666.65907.peg.253 CDS gi|333351960|gb|AFIZ01000047.1| 6917 7687 2 + 771 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.254 CDS gi|333351960|gb|AFIZ01000047.1| 8099 7722 -2 - 378 hypothetical protein - none -
fig|6666666.65907.peg.255 CDS gi|333351960|gb|AFIZ01000047.1| 8158 9522 1 + 1365 No significant database matches - none -
fig|6666666.65907.peg.256 CDS gi|333351960|gb|AFIZ01000047.1| 9528 10763 3 + 1236 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65907.peg.257 CDS gi|333351960|gb|AFIZ01000047.1| 11726 10791 -2 - 936 hypothetical protein - none -
fig|6666666.65907.peg.258 CDS gi|333351960|gb|AFIZ01000047.1| 13161 11734 -3 - 1428 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65907.peg.259 CDS gi|333351960|gb|AFIZ01000047.1| 14182 13226 -1 - 957 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65907.peg.260 CDS gi|333351960|gb|AFIZ01000047.1| 14960 14187 -2 - 774 Tryptophan synthase alpha chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65907.peg.261 CDS gi|333351960|gb|AFIZ01000047.1| 16282 14960 -1 - 1323 Tryptophan synthase beta chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65907.peg.262 CDS gi|333351960|gb|AFIZ01000047.1| 17122 16310 -1 - 813 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65907.peg.263 CDS gi|333351960|gb|AFIZ01000047.1| 17944 17180 -1 - 765 FIG00545012: hypothetical protein - none -
fig|6666666.65907.peg.264 CDS gi|333351960|gb|AFIZ01000047.1| 19488 17941 -3 - 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65907.peg.265 CDS gi|333351960|gb|AFIZ01000047.1| 19891 19481 -1 - 411 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis
fig|6666666.65907.peg.266 CDS gi|333351960|gb|AFIZ01000047.1| 20664 19888 -3 - 777 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.65907.peg.267 CDS gi|333351960|gb|AFIZ01000047.1| 21659 20661 -2 - 999 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65907.peg.268 CDS gi|333351960|gb|AFIZ01000047.1| 22405 21656 -1 - 750 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) / Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis;
Tryptophan synthesis
fig|6666666.65907.peg.269 CDS gi|333351960|gb|AFIZ01000047.1| 23128 22463 -1 - 666 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.65907.peg.270 CDS gi|333351960|gb|AFIZ01000047.1| 24448 23159 -1 - 1290 putative transport protein - none -
fig|6666666.65907.peg.271 CDS gi|333351960|gb|AFIZ01000047.1| 25047 24445 -3 - 603 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.65907.peg.272 CDS gi|333351960|gb|AFIZ01000047.1| 26156 25044 -2 - 1113 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.65907.peg.273 CDS gi|333351960|gb|AFIZ01000047.1| 27478 26162 -1 - 1317 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.65907.peg.274 CDS gi|333351960|gb|AFIZ01000047.1| 27564 29390 3 + 1827 hypothetical protein - none -
fig|6666666.65907.peg.275 CDS gi|333351960|gb|AFIZ01000047.1| 29529 29404 -3 - 126 hypothetical protein - none -
fig|6666666.65907.peg.276 CDS gi|333351960|gb|AFIZ01000047.1| 30618 29827 -3 - 792 hypothetical protein - none -
fig|6666666.65907.peg.277 CDS gi|333351960|gb|AFIZ01000047.1| 31170 30655 -3 - 516 hypothetical protein - none -
fig|6666666.65907.peg.278 CDS gi|333351960|gb|AFIZ01000047.1| 31904 31179 -2 - 726 hypothetical protein - none -
fig|6666666.65907.peg.279 CDS gi|333351960|gb|AFIZ01000047.1| 32030 32533 2 + 504 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.65907.peg.280 CDS gi|333351960|gb|AFIZ01000047.1| 32526 33407 3 + 882 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.65907.peg.281 CDS gi|333351960|gb|AFIZ01000047.1| 33423 33959 3 + 537 hypothetical protein - none -
fig|6666666.65907.peg.282 CDS gi|333351960|gb|AFIZ01000047.1| 34006 35004 1 + 999 FIG00544169: hypothetical protein - none -
fig|6666666.65907.peg.283 CDS gi|333351960|gb|AFIZ01000047.1| 35347 34985 -1 - 363 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65907.peg.284 CDS gi|333351960|gb|AFIZ01000047.1| 35580 35344 -3 - 237 hypothetical protein - none -
fig|6666666.65907.peg.285 CDS gi|333351960|gb|AFIZ01000047.1| 36266 35592 -2 - 675 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.65907.peg.286 CDS gi|333351960|gb|AFIZ01000047.1| 39832 36266 -1 - 3567 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65907.peg.287 CDS gi|333351960|gb|AFIZ01000047.1| 39809 39994 2 + 186 hypothetical protein - none -
fig|6666666.65907.peg.288 CDS gi|333351960|gb|AFIZ01000047.1| 40004 41170 2 + 1167 COG family: RecA-superfamily ATPases implicated in signal transduction - none -
fig|6666666.65907.peg.289 CDS gi|333351960|gb|AFIZ01000047.1| 41645 41148 -2 - 498 hypothetical protein - none -
fig|6666666.65907.peg.290 CDS gi|333351960|gb|AFIZ01000047.1| 42741 41755 -3 - 987 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) NAD and NADP cofactor biosynthesis global
fig|6666666.65907.peg.291 CDS gi|333351960|gb|AFIZ01000047.1| 43874 42753 -2 - 1122 Quinolinate synthetase (EC 2.5.1.72) NAD and NADP cofactor biosynthesis global
fig|6666666.65907.peg.292 CDS gi|333351960|gb|AFIZ01000047.1| 43934 45121 2 + 1188 L-gulono-1,4-lactone oxidase (EC 1.1.3.8) - none -
fig|6666666.65907.peg.293 CDS gi|333351960|gb|AFIZ01000047.1| 45118 46437 1 + 1320 FAD-dependent oxidoreductase - none -
fig|6666666.65907.peg.294 CDS gi|333351960|gb|AFIZ01000047.1| 47342 46407 -2 - 936 Protein rarD - none -
fig|6666666.65907.peg.295 CDS gi|333351960|gb|AFIZ01000047.1| 48010 47339 -1 - 672 hypothetical protein - none -
fig|6666666.65907.peg.296 CDS gi|333351960|gb|AFIZ01000047.1| 48954 48007 -3 - 948 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65907.peg.297 CDS gi|333351960|gb|AFIZ01000047.1| 49535 48951 -2 - 585 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65907.peg.298 CDS gi|333351960|gb|AFIZ01000047.1| 49600 50643 1 + 1044 hypothetical protein - none -
fig|6666666.65907.peg.299 CDS gi|333351960|gb|AFIZ01000047.1| 51311 50649 -2 - 663 Putative secreted protein - none -
fig|6666666.65907.peg.300 CDS gi|333351960|gb|AFIZ01000047.1| 51440 52354 2 + 915 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.301 CDS gi|333351960|gb|AFIZ01000047.1| 53633 52317 -2 - 1317 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65907.peg.302 CDS gi|333351960|gb|AFIZ01000047.1| 53820 55109 3 + 1290 hypothetical protein - none -
fig|6666666.65907.peg.303 CDS gi|333351960|gb|AFIZ01000047.1| 56754 55264 -3 - 1491 L-asparagine permease - none -
fig|6666666.65907.peg.304 CDS gi|333351960|gb|AFIZ01000047.1| 60137 56928 -2 - 3210 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65907.peg.305 CDS gi|333351960|gb|AFIZ01000047.1| 60204 60362 3 + 159 hypothetical protein - none -
fig|6666666.65907.peg.306 CDS gi|333351960|gb|AFIZ01000047.1| 60593 60435 -2 - 159 hypothetical protein - none -
fig|6666666.65907.peg.307 CDS gi|333351960|gb|AFIZ01000047.1| 61677 60610 -3 - 1068 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.308 CDS gi|333351960|gb|AFIZ01000047.1| 62189 61890 -2 - 300 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.309 CDS gi|333351960|gb|AFIZ01000047.1| 62812 62195 -1 - 618 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.310 CDS gi|333351960|gb|AFIZ01000047.1| 63657 62959 -3 - 699 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.311 CDS gi|333351960|gb|AFIZ01000047.1| 65026 63698 -1 - 1329 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.312 CDS gi|333351960|gb|AFIZ01000047.1| 65768 65088 -2 - 681 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.313 CDS gi|333351960|gb|AFIZ01000047.1| 67243 65774 -1 - 1470 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65907.peg.314 CDS gi|333351960|gb|AFIZ01000047.1| 68370 67240 -3 - 1131 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65907.peg.315 CDS gi|333351960|gb|AFIZ01000047.1| 69845 68376 -2 - 1470 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65907.peg.316 CDS gi|333351960|gb|AFIZ01000047.1| 71353 69851 -1 - 1503 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65907.peg.317 CDS gi|333351960|gb|AFIZ01000047.1| 72472 71369 -1 - 1104 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65907.peg.318 CDS gi|333351960|gb|AFIZ01000047.1| 73978 72476 -1 - 1503 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65907.peg.319 CDS gi|333351960|gb|AFIZ01000047.1| 75561 73975 -3 - 1587 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65907.peg.320 CDS gi|333351960|gb|AFIZ01000047.1| 77498 75654 -2 - 1845 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.321 CDS gi|333351960|gb|AFIZ01000047.1| 78446 77715 -2 - 732 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.65907.peg.322 CDS gi|333351960|gb|AFIZ01000047.1| 79555 78521 -1 - 1035 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65907.peg.323 CDS gi|333351960|gb|AFIZ01000047.1| 80202 79771 -3 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65907.peg.324 CDS gi|333351960|gb|AFIZ01000047.1| 80865 82421 3 + 1557 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.325 CDS gi|333351960|gb|AFIZ01000047.1| 82629 82489 -3 - 141 hypothetical protein - none -
fig|6666666.65907.peg.326 CDS gi|333351960|gb|AFIZ01000047.1| 83193 82834 -3 - 360 FIG017342: transmembrane protein - none -
fig|6666666.65907.peg.327 CDS gi|333351960|gb|AFIZ01000047.1| 83863 83366 -1 - 498 hypothetical protein - none -
fig|6666666.65907.peg.328 CDS gi|333351960|gb|AFIZ01000047.1| 83973 84578 3 + 606 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65907.peg.329 CDS gi|333351960|gb|AFIZ01000047.1| 85609 84629 -1 - 981 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65907.peg.330 CDS gi|333351960|gb|AFIZ01000047.1| 85701 86816 3 + 1116 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.65907.peg.331 CDS gi|333351960|gb|AFIZ01000047.1| 86818 88584 1 + 1767 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65907.peg.332 CDS gi|333351960|gb|AFIZ01000047.1| 89018 91249 2 + 2232 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65907.peg.333 CDS gi|333351960|gb|AFIZ01000047.1| 92840 91440 -2 - 1401 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65907.peg.334 CDS gi|333351960|gb|AFIZ01000047.1| 93399 92878 -3 - 522 FIG00544385: hypothetical protein - none -
fig|6666666.65907.peg.335 CDS gi|333351960|gb|AFIZ01000047.1| 95705 93411 -2 - 2295 FIG00548710: hypothetical protein - none -
fig|6666666.65907.peg.336 CDS gi|333351960|gb|AFIZ01000047.1| 95811 97043 3 + 1233 Probable conserved integral membrane protein - none -
fig|6666666.65907.peg.337 CDS gi|333351960|gb|AFIZ01000047.1| 97810 97031 -1 - 780 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.338 CDS gi|333351960|gb|AFIZ01000047.1| 98795 97803 -2 - 993 ROK family protein (putative glucokinase) - none -
fig|6666666.65907.peg.339 CDS gi|333351960|gb|AFIZ01000047.1| 100028 98844 -2 - 1185 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65907.peg.340 CDS gi|333351960|gb|AFIZ01000047.1| 101181 100048 -3 - 1134 NLP/P60 family protein - none -
fig|6666666.65907.peg.341 CDS gi|333351960|gb|AFIZ01000047.1| 101974 101381 -1 - 594 putative secreted protein - none -
fig|6666666.65907.peg.342 CDS gi|333351960|gb|AFIZ01000047.1| 102426 103004 3 + 579 hypothetical protein - none -
fig|6666666.65907.peg.343 CDS gi|333351960|gb|AFIZ01000047.1| 105370 103772 -1 - 1599 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65907.peg.344 CDS gi|333351960|gb|AFIZ01000047.1| 106623 105415 -3 - 1209 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65907.peg.345 CDS gi|333351960|gb|AFIZ01000047.1| 107444 106620 -2 - 825 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65907.peg.346 CDS gi|333351960|gb|AFIZ01000047.1| 108196 107612 -1 - 585 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65907.peg.347 CDS gi|333351960|gb|AFIZ01000047.1| 108627 109724 3 + 1098 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65907.peg.348 CDS gi|333351960|gb|AFIZ01000047.1| 110373 109942 -3 - 432 Possible conserved integral membrane protein - none -
fig|6666666.65907.peg.349 CDS gi|333351960|gb|AFIZ01000047.1| 111512 110403 -2 - 1110 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65907.peg.350 CDS gi|333351960|gb|AFIZ01000047.1| 111922 113859 1 + 1938 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.351 CDS gi|333351960|gb|AFIZ01000047.1| 114344 113994 -2 - 351 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65907.peg.352 CDS gi|333351960|gb|AFIZ01000047.1| 114469 115188 1 + 720 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65907.peg.353 CDS gi|333351960|gb|AFIZ01000047.1| 115193 116089 2 + 897 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.65907.peg.354 CDS gi|333351960|gb|AFIZ01000047.1| 117458 116322 -2 - 1137 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65907.peg.355 CDS gi|333351960|gb|AFIZ01000047.1| 117583 119208 1 + 1626 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65907.peg.356 CDS gi|333351960|gb|AFIZ01000047.1| 119319 121013 3 + 1695 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.65907.peg.357 CDS gi|333351960|gb|AFIZ01000047.1| 121149 121922 3 + 774 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65907.peg.358 CDS gi|333351960|gb|AFIZ01000047.1| 121933 122979 1 + 1047 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65907.peg.359 CDS gi|333351960|gb|AFIZ01000047.1| 123022 123795 1 + 774 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65907.peg.360 CDS gi|333351960|gb|AFIZ01000047.1| 124409 123792 -2 - 618 FIG00543905: hypothetical protein - none -
fig|6666666.65907.peg.361 CDS gi|333351960|gb|AFIZ01000047.1| 124678 126114 1 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.362 CDS gi|333351960|gb|AFIZ01000047.1| 127407 126235 -3 - 1173 Acyl-CoA dehydrogenase family protein - none -
fig|6666666.65907.peg.363 CDS gi|333351960|gb|AFIZ01000047.1| 128599 127433 -1 - 1167 FadE30 - none -
fig|6666666.65907.peg.364 CDS gi|333351960|gb|AFIZ01000047.1| 128808 129473 3 + 666 oxidoreductase ylbE - none -
fig|6666666.65907.peg.365 CDS gi|333351960|gb|AFIZ01000047.1| 130578 129634 -3 - 945 Short-chain dehydrogenase/oxidoreductase - none -
fig|6666666.65907.peg.366 CDS gi|333351960|gb|AFIZ01000047.1| 131644 130871 -1 - 774 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65907.peg.367 CDS gi|333351960|gb|AFIZ01000047.1| 131790 133046 3 + 1257 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65907.peg.368 CDS gi|333351960|gb|AFIZ01000047.1| 133043 133261 2 + 219 Sulfur carrier protein ThiS Thiamin biosynthesis
fig|6666666.65907.peg.369 CDS gi|333351960|gb|AFIZ01000047.1| 133270 134082 1 + 813 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65907.peg.370 CDS gi|333351960|gb|AFIZ01000047.1| 134079 135230 3 + 1152 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65907.peg.371 CDS gi|333351960|gb|AFIZ01000047.1| 136654 135266 -1 - 1389 FIG00545265: hypothetical protein - none -
fig|6666666.65907.peg.372 CDS gi|333351960|gb|AFIZ01000047.1| 137611 136667 -1 - 945 FIG00543922: hypothetical protein - none -
fig|6666666.65907.peg.373 CDS gi|333351960|gb|AFIZ01000047.1| 137683 138951 1 + 1269 hypothetical protein - none -
fig|6666666.65907.peg.374 CDS gi|333351960|gb|AFIZ01000047.1| 138963 140351 3 + 1389 putative integral membrane protein - none -
fig|6666666.65907.peg.375 CDS gi|333351960|gb|AFIZ01000047.1| 141070 140303 -1 - 768 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.65907.peg.376 CDS gi|333351960|gb|AFIZ01000047.1| 141543 141058 -3 - 486 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65907.peg.377 CDS gi|333351960|gb|AFIZ01000047.1| 142232 141540 -2 - 693 hypothetical protein - none -
fig|6666666.65907.peg.378 CDS gi|333351960|gb|AFIZ01000047.1| 142936 142280 -1 - 657 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.379 CDS gi|333351960|gb|AFIZ01000047.1| 143999 143172 -2 - 828 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.380 CDS gi|333351960|gb|AFIZ01000047.1| 145048 143996 -1 - 1053 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.381 CDS gi|333351960|gb|AFIZ01000047.1| 148186 145067 -1 - 3120 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.65907.peg.382 CDS gi|333351960|gb|AFIZ01000047.1| 149538 148186 -3 - 1353 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.383 CDS gi|333351960|gb|AFIZ01000047.1| 149642 150478 2 + 837 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.65907.peg.384 CDS gi|333351960|gb|AFIZ01000047.1| 150926 150708 -2 - 219 hypothetical protein - none -
fig|6666666.65907.peg.385 CDS gi|333351960|gb|AFIZ01000047.1| 151271 150945 -2 - 327 hypothetical membrane protein - none -
fig|6666666.65907.peg.386 CDS gi|333351960|gb|AFIZ01000047.1| 151639 151268 -1 - 372 hypothetical protein - none -
fig|6666666.65907.peg.387 CDS gi|333351960|gb|AFIZ01000047.1| 152837 152100 -2 - 738 hypothetical protein - none -
fig|6666666.65907.peg.388 CDS gi|333351960|gb|AFIZ01000047.1| 153694 152834 -1 - 861 FIG042796: Hypothetical protein CBSS-349161.4.peg.2417
fig|6666666.65907.peg.389 CDS gi|333351960|gb|AFIZ01000047.1| 153765 154937 3 + 1173 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.65907.peg.390 CDS gi|333351960|gb|AFIZ01000047.1| 155201 154956 -2 - 246 hypothetical protein - none -
fig|6666666.65907.peg.391 CDS gi|333351960|gb|AFIZ01000047.1| 156199 155201 -1 - 999 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.65907.peg.392 CDS gi|333351960|gb|AFIZ01000047.1| 157358 156255 -2 - 1104 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65907.peg.393 CDS gi|333351960|gb|AFIZ01000047.1| 159796 157454 -1 - 2343 hypothetical protein - none -
fig|6666666.65907.peg.394 CDS gi|333351960|gb|AFIZ01000047.1| 161090 160662 -2 - 429 FIG01123188: hypothetical protein - none -
fig|6666666.65907.peg.395 CDS gi|333351960|gb|AFIZ01000047.1| 161389 164172 1 + 2784 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.396 CDS gi|333351960|gb|AFIZ01000047.1| 164278 164631 1 + 354 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.397 CDS gi|333351960|gb|AFIZ01000047.1| 164634 165530 3 + 897 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65907.peg.398 CDS gi|333351960|gb|AFIZ01000047.1| 166795 165527 -1 - 1269 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.65907.peg.399 CDS gi|333351960|gb|AFIZ01000047.1| 167725 168738 1 + 1014 hypothetical protein - none -
fig|6666666.65907.peg.400 CDS gi|333351960|gb|AFIZ01000047.1| 169196 168753 -2 - 444 hypothetical protein - none -
fig|6666666.65907.peg.401 CDS gi|333351960|gb|AFIZ01000047.1| 169967 169308 -2 - 660 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.65907.peg.402 CDS gi|333351960|gb|AFIZ01000047.1| 171082 169964 -1 - 1119 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.65907.peg.403 CDS gi|333351960|gb|AFIZ01000047.1| 171263 171637 2 + 375 hypothetical protein - none -
fig|6666666.65907.peg.404 CDS gi|333351960|gb|AFIZ01000047.1| 173682 171679 -3 - 2004 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65907.peg.405 CDS gi|333351960|gb|AFIZ01000047.1| 173887 173762 -1 - 126 hypothetical protein - none -
fig|6666666.65907.peg.406 CDS gi|333351960|gb|AFIZ01000047.1| 173867 175636 2 + 1770 Cholesterol oxidase (EC 1.1.3.6) - none -
fig|6666666.65907.peg.407 CDS gi|333351960|gb|AFIZ01000047.1| 175675 176190 1 + 516 putative ribonuclease - none -
fig|6666666.65907.peg.408 CDS gi|333351960|gb|AFIZ01000047.1| 177511 176204 -1 - 1308 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65907.peg.409 CDS gi|333351960|gb|AFIZ01000047.1| 178218 177517 -3 - 702 EpiH/GdmH-related protein - none -
fig|6666666.65907.peg.410 CDS gi|333351960|gb|AFIZ01000047.1| 178362 180332 3 + 1971 POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN - none -
fig|6666666.65907.peg.411 CDS gi|333351960|gb|AFIZ01000047.1| 181537 180935 -1 - 603 FIG00544046: hypothetical protein - none -
fig|6666666.65907.peg.412 CDS gi|333351960|gb|AFIZ01000047.1| 182936 181554 -2 - 1383 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65907.peg.413 CDS gi|333351960|gb|AFIZ01000047.1| 183258 183677 3 + 420 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.65907.peg.414 CDS gi|333351960|gb|AFIZ01000047.1| 184940 183732 -2 - 1209 FIG00544679: hypothetical protein - none -
fig|6666666.65907.peg.415 CDS gi|333351960|gb|AFIZ01000047.1| 185662 184937 -1 - 726 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65907.peg.416 CDS gi|333351960|gb|AFIZ01000047.1| 186511 185705 -1 - 807 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65907.peg.417 CDS gi|333351960|gb|AFIZ01000047.1| 187076 186564 -2 - 513 hypothetical protein - none -
fig|6666666.65907.peg.418 CDS gi|333351960|gb|AFIZ01000047.1| 188140 187124 -1 - 1017 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65907.peg.419 CDS gi|333351960|gb|AFIZ01000047.1| 189551 188133 -2 - 1419 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65907.peg.420 CDS gi|333351960|gb|AFIZ01000047.1| 190150 189548 -1 - 603 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65907.peg.421 CDS gi|333351960|gb|AFIZ01000047.1| 191226 190147 -3 - 1080 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.65907.peg.422 CDS gi|333351960|gb|AFIZ01000047.1| 192048 191272 -3 - 777 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.65907.peg.423 CDS gi|333351960|gb|AFIZ01000047.1| 193213 192062 -1 - 1152 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65907.peg.424 CDS gi|333351960|gb|AFIZ01000047.1| 194294 193266 -2 - 1029 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65907.peg.425 CDS gi|333351960|gb|AFIZ01000047.1| 195645 194383 -3 - 1263 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65907.peg.426 CDS gi|333351960|gb|AFIZ01000047.1| 196365 195661 -3 - 705 FIG00543880: hypothetical protein - none -
fig|6666666.65907.peg.427 CDS gi|333351960|gb|AFIZ01000047.1| 198313 196487 -1 - 1827 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.428 CDS gi|333351960|gb|AFIZ01000047.1| 198859 198545 -1 - 315 hypothetical protein - none -
fig|6666666.65907.peg.429 CDS gi|333351961|gb|AFIZ01000046.1| 1406 102 -2 - 1305 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.65907.peg.430 CDS gi|333351961|gb|AFIZ01000046.1| 2587 1403 -1 - 1185 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.65907.peg.431 CDS gi|333351961|gb|AFIZ01000046.1| 2880 2584 -3 - 297 FIG00547530: hypothetical protein - none -
fig|6666666.65907.peg.432 CDS gi|333351961|gb|AFIZ01000046.1| 4560 2908 -3 - 1653 Predicted sodium-dependent galactose transporter - none -
fig|6666666.65907.peg.433 CDS gi|333351961|gb|AFIZ01000046.1| 5510 4602 -2 - 909 putative aldose-1-epimerase - none -
fig|6666666.65907.peg.434 CDS gi|333351961|gb|AFIZ01000046.1| 6930 5659 -3 - 1272 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65907.peg.435 CDS gi|333351961|gb|AFIZ01000046.1| 7142 6975 -2 - 168 UPF0434 protein YcaR - none -
fig|6666666.65907.peg.436 CDS gi|333351961|gb|AFIZ01000046.1| 8698 7259 -1 - 1440 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65907.peg.437 CDS gi|333351961|gb|AFIZ01000046.1| 9915 8713 -3 - 1203 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65907.peg.438 CDS gi|333351961|gb|AFIZ01000046.1| 10459 9959 -1 - 501 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65907.peg.439 CDS gi|333351961|gb|AFIZ01000046.1| 11352 10444 -3 - 909 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65907.peg.440 CDS gi|333351961|gb|AFIZ01000046.1| 12531 11353 -3 - 1179 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65907.peg.441 CDS gi|333351961|gb|AFIZ01000046.1| 13468 12524 -1 - 945 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65907.peg.442 CDS gi|333351961|gb|AFIZ01000046.1| 14662 13484 -1 - 1179 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.65907.peg.443 CDS gi|333351961|gb|AFIZ01000046.1| 15706 14687 -1 - 1020 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65907.peg.444 CDS gi|333351961|gb|AFIZ01000046.1| 18482 15900 -2 - 2583 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65907.peg.445 CDS gi|333351961|gb|AFIZ01000046.1| 19584 18544 -3 - 1041 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65907.peg.446 CDS gi|333351961|gb|AFIZ01000046.1| 20532 19636 -3 - 897 FIG011178: rRNA methylase RNA methylation
fig|6666666.65907.peg.447 CDS gi|333351961|gb|AFIZ01000046.1| 20995 20633 -1 - 363 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65907.peg.448 CDS gi|333351961|gb|AFIZ01000046.1| 21267 21073 -3 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65907.peg.449 CDS gi|333351961|gb|AFIZ01000046.1| 21667 21311 -1 - 357 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65907.peg.450 CDS gi|333351961|gb|AFIZ01000046.1| 24925 22079 -1 - 2847 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65907.peg.451 CDS gi|333351961|gb|AFIZ01000046.1| 25043 25753 2 + 711 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65907.peg.452 CDS gi|333351961|gb|AFIZ01000046.1| 25747 28071 1 + 2325 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65907.peg.453 CDS gi|333351961|gb|AFIZ01000046.1| 29426 28068 -2 - 1359 hypothetical protein - none -
fig|6666666.65907.peg.454 CDS gi|333351961|gb|AFIZ01000046.1| 29618 30274 2 + 657 regulatory protein, MerR - none -
fig|6666666.65907.peg.455 CDS gi|333351961|gb|AFIZ01000046.1| 30688 30867 1 + 180 hypothetical protein - none -
fig|6666666.65907.peg.456 CDS gi|333351961|gb|AFIZ01000046.1| 31279 30845 -1 - 435 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65907.peg.457 CDS gi|333351961|gb|AFIZ01000046.1| 33420 31297 -3 - 2124 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65907.peg.458 CDS gi|333351961|gb|AFIZ01000046.1| 34027 33431 -1 - 597 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65907.peg.459 CDS gi|333351961|gb|AFIZ01000046.1| 35372 34056 -2 - 1317 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65907.peg.460 CDS gi|333351961|gb|AFIZ01000046.1| 35591 36925 2 + 1335 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.461 CDS gi|333351961|gb|AFIZ01000046.1| 36935 37873 2 + 939 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.65907.peg.462 CDS gi|333351961|gb|AFIZ01000046.1| 37958 39211 2 + 1254 major facilitator superfamily MFS_1 - none -
fig|6666666.65907.peg.463 CDS gi|333351961|gb|AFIZ01000046.1| 41221 39233 -1 - 1989 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.65907.peg.464 CDS gi|333351961|gb|AFIZ01000046.1| 41330 41890 2 + 561 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.465 CDS gi|333351961|gb|AFIZ01000046.1| 43605 42142 -3 - 1464 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.65907.peg.466 CDS gi|333351961|gb|AFIZ01000046.1| 44912 43770 -2 - 1143 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65907.peg.467 CDS gi|333351961|gb|AFIZ01000046.1| 45018 45905 3 + 888 Putative membrane protein - none -
fig|6666666.65907.peg.468 CDS gi|333351961|gb|AFIZ01000046.1| 45915 46622 3 + 708 FIG00828037: hypothetical protein - none -
fig|6666666.65907.peg.469 CDS gi|333351962|gb|AFIZ01000045.1| 1075 230 -1 - 846 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65907.peg.470 CDS gi|333351962|gb|AFIZ01000045.1| 1252 1914 1 + 663 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.471 CDS gi|333351962|gb|AFIZ01000045.1| 1987 3075 1 + 1089 hypothetical protein - none -
fig|6666666.65907.peg.472 CDS gi|333351962|gb|AFIZ01000045.1| 3072 3740 3 + 669 putative ABC transport system ATP-binding protein - none -
fig|6666666.65907.peg.473 CDS gi|333351962|gb|AFIZ01000045.1| 8932 3863 -1 - 5070 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65907.peg.474 CDS gi|333351962|gb|AFIZ01000045.1| 9071 9838 2 + 768 inositol monophosphatase family protein - none -
fig|6666666.65907.peg.475 CDS gi|333351962|gb|AFIZ01000045.1| 10974 9919 -3 - 1056 hypothetical protein - none -
fig|6666666.65907.peg.476 CDS gi|333351962|gb|AFIZ01000045.1| 11424 11014 -3 - 411 hypothetical protein - none -
fig|6666666.65907.peg.477 CDS gi|333351962|gb|AFIZ01000045.1| 11943 11458 -3 - 486 hypothetical protein - none -
fig|6666666.65907.peg.478 CDS gi|333351962|gb|AFIZ01000045.1| 14208 12019 -3 - 2190 hypothetical protein - none -
fig|6666666.65907.peg.479 CDS gi|333351962|gb|AFIZ01000045.1| 14969 14319 -2 - 651 hypothetical protein - none -
fig|6666666.65907.peg.480 CDS gi|333351962|gb|AFIZ01000045.1| 15526 15639 1 + 114 hypothetical protein - none -
fig|6666666.65907.peg.481 CDS gi|333351962|gb|AFIZ01000045.1| 15910 16608 1 + 699 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.482 CDS gi|333351962|gb|AFIZ01000045.1| 16635 17438 3 + 804 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.65907.peg.483 CDS gi|333351962|gb|AFIZ01000045.1| 17435 18019 2 + 585 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65907.peg.484 CDS gi|333351962|gb|AFIZ01000045.1| 18012 18275 3 + 264 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65907.peg.485 CDS gi|333351962|gb|AFIZ01000045.1| 18603 18974 3 + 372 hypothetical protein - none -
fig|6666666.65907.peg.486 CDS gi|333351962|gb|AFIZ01000045.1| 19047 20696 3 + 1650 putative transport protein - none -
fig|6666666.65907.peg.487 CDS gi|333351962|gb|AFIZ01000045.1| 21514 23184 1 + 1671 putative alkaline phosphatase - none -
fig|6666666.65907.peg.488 CDS gi|333351962|gb|AFIZ01000045.1| 23918 23247 -2 - 672 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.65907.peg.489 CDS gi|333351962|gb|AFIZ01000045.1| 25021 23918 -1 - 1104 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.65907.peg.490 CDS gi|333351962|gb|AFIZ01000045.1| 27580 25106 -1 - 2475 cation-transporting ATPase, E1-E2 family - none -
fig|6666666.65907.peg.491 CDS gi|333351962|gb|AFIZ01000045.1| 28367 27585 -2 - 783 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.492 CDS gi|333351962|gb|AFIZ01000045.1| 29560 28679 -1 - 882 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65907.peg.493 CDS gi|333351962|gb|AFIZ01000045.1| 29801 30025 2 + 225 hypothetical protein - none -
fig|6666666.65907.peg.494 CDS gi|333351962|gb|AFIZ01000045.1| 30062 30769 2 + 708 hypothetical protein - none -
fig|6666666.65907.peg.495 CDS gi|333351962|gb|AFIZ01000045.1| 31005 31286 3 + 282 transcriptional regulator, HTH_3 family - none -
fig|6666666.65907.peg.496 CDS gi|333351962|gb|AFIZ01000045.1| 31283 31774 2 + 492 hypothetical protein - none -
fig|6666666.65907.peg.497 CDS gi|333351962|gb|AFIZ01000045.1| 31867 32757 1 + 891 ABC transporter, ATP-binding protein - none -
fig|6666666.65907.peg.498 CDS gi|333351962|gb|AFIZ01000045.1| 32754 33932 3 + 1179 possible ABC transporter, permease component - none -
fig|6666666.65907.peg.499 CDS gi|333351962|gb|AFIZ01000045.1| 34039 34575 1 + 537 Uricase (EC 1.7.3.3) - none -
fig|6666666.65907.peg.500 CDS gi|333351962|gb|AFIZ01000045.1| 34957 34601 -1 - 357 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65907.peg.501 CDS gi|333351962|gb|AFIZ01000045.1| 36609 35314 -3 - 1296 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65907.peg.502 CDS gi|333351962|gb|AFIZ01000045.1| 36894 38027 3 + 1134 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65907.peg.503 CDS gi|333351962|gb|AFIZ01000045.1| 38236 39255 1 + 1020 hypothetical protein - none -
fig|6666666.65907.peg.504 CDS gi|333351962|gb|AFIZ01000045.1| 39268 40167 1 + 900 FIG00544583: hypothetical protein - none -
fig|6666666.65907.peg.505 CDS gi|333351962|gb|AFIZ01000045.1| 41352 40471 -3 - 882 rRNA methylase - none -
fig|6666666.65907.peg.506 CDS gi|333351962|gb|AFIZ01000045.1| 42932 41367 -2 - 1566 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65907.peg.507 CDS gi|333351962|gb|AFIZ01000045.1| 43045 43890 1 + 846 glutamine cyclotransferase - none -
fig|6666666.65907.peg.508 CDS gi|333351962|gb|AFIZ01000045.1| 43883 45415 2 + 1533 possible membrane protein - none -
fig|6666666.65907.peg.509 CDS gi|333351962|gb|AFIZ01000045.1| 45473 46048 2 + 576 hypothetical protein - none -
fig|6666666.65907.peg.510 CDS gi|333351962|gb|AFIZ01000045.1| 46591 46208 -1 - 384 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65907.peg.511 CDS gi|333351962|gb|AFIZ01000045.1| 47041 47664 1 + 624 FIG00996461: hypothetical protein - none -
fig|6666666.65907.peg.512 CDS gi|333351962|gb|AFIZ01000045.1| 48735 48472 -3 - 264 hypothetical protein - none -
fig|6666666.65907.peg.513 CDS gi|333351962|gb|AFIZ01000045.1| 48826 51198 1 + 2373 probable DNA-binding protein - none -
fig|6666666.65907.peg.514 CDS gi|333351962|gb|AFIZ01000045.1| 51236 52882 2 + 1647 putative helicase - none -
fig|6666666.65907.peg.515 CDS gi|333351962|gb|AFIZ01000045.1| 52895 53536 2 + 642 FIG00544717: hypothetical protein - none -
fig|6666666.65907.peg.516 CDS gi|333351962|gb|AFIZ01000045.1| 53907 54665 3 + 759 Lactam utilization protein LamB - none -
fig|6666666.65907.peg.517 CDS gi|333351962|gb|AFIZ01000045.1| 54662 56242 2 + 1581 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) - none -
fig|6666666.65907.peg.518 CDS gi|333351962|gb|AFIZ01000045.1| 56239 58095 1 + 1857 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.519 CDS gi|333351962|gb|AFIZ01000045.1| 58436 58624 2 + 189 hypothetical protein - none -
fig|6666666.65907.peg.520 CDS gi|333351962|gb|AFIZ01000045.1| 58664 59281 2 + 618 Transcriptional regulator, GntR family - none -
fig|6666666.65907.peg.521 CDS gi|333351962|gb|AFIZ01000045.1| 61281 60229 -3 - 1053 hypothetical protein - none -
fig|6666666.65907.peg.522 CDS gi|333351962|gb|AFIZ01000045.1| 61301 62563 2 + 1263 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.523 CDS gi|333351962|gb|AFIZ01000045.1| 62602 63813 1 + 1212 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.65907.peg.524 CDS gi|333351962|gb|AFIZ01000045.1| 63903 64934 3 + 1032 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.65907.peg.525 CDS gi|333351962|gb|AFIZ01000045.1| 66411 65005 -3 - 1407 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65907.peg.526 CDS gi|333351963|gb|AFIZ01000044.1| 523 912 1 + 390 hypothetical protein - none -
fig|6666666.65907.peg.527 CDS gi|333351963|gb|AFIZ01000044.1| 964 1800 1 + 837 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65907.peg.528 CDS gi|333351963|gb|AFIZ01000044.1| 1878 3548 3 + 1671 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65907.peg.529 CDS gi|333351963|gb|AFIZ01000044.1| 4656 3646 -3 - 1011 hypothetical protein - none -
fig|6666666.65907.peg.530 CDS gi|333351964|gb|AFIZ01000043.1| 2125 1679 -1 - 447 Ribonucleotide reduction protein NrdI - none -
fig|6666666.65907.peg.531 CDS gi|333351964|gb|AFIZ01000043.1| 3478 2129 -1 - 1350 putative membrane protein - none -
fig|6666666.65907.peg.532 CDS gi|333351964|gb|AFIZ01000043.1| 3841 3611 -1 - 231 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.65907.peg.533 CDS gi|333351964|gb|AFIZ01000043.1| 3854 4054 2 + 201 hypothetical protein - none -
fig|6666666.65907.peg.534 CDS gi|333351964|gb|AFIZ01000043.1| 4456 4334 -1 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65907.peg.535 CDS gi|333351964|gb|AFIZ01000043.1| 5245 4637 -1 - 609 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.536 CDS gi|333351964|gb|AFIZ01000043.1| 5460 5936 3 + 477 Transcriptional regulator, MarR family - none -
fig|6666666.65907.peg.537 CDS gi|333351964|gb|AFIZ01000043.1| 6008 6868 2 + 861 hypothetical protein - none -
fig|6666666.65907.peg.538 CDS gi|333351964|gb|AFIZ01000043.1| 7184 8269 2 + 1086 putative integral membrane protein - none -
fig|6666666.65907.peg.539 CDS gi|333351964|gb|AFIZ01000043.1| 8710 8279 -1 - 432 hypothetical protein - none -
fig|6666666.65907.peg.540 CDS gi|333351964|gb|AFIZ01000043.1| 10480 9125 -1 - 1356 putative carboxylesterase - none -
fig|6666666.65907.peg.541 CDS gi|333351964|gb|AFIZ01000043.1| 11378 11184 -2 - 195 hypothetical protein - none -
fig|6666666.65907.peg.542 CDS gi|333351964|gb|AFIZ01000043.1| 13533 11380 -3 - 2154 Carbon starvation protein A Carbon Starvation
fig|6666666.65907.peg.543 CDS gi|333351964|gb|AFIZ01000043.1| 14401 14177 -1 - 225 hypothetical protein - none -
fig|6666666.65907.peg.544 CDS gi|333351964|gb|AFIZ01000043.1| 15298 14549 -1 - 750 hypothetical protein - none -
fig|6666666.65907.peg.545 CDS gi|333351964|gb|AFIZ01000043.1| 15582 16535 3 + 954 Phenylacetate-CoA oxygenase, PaaG subunit - none -
fig|6666666.65907.peg.546 CDS gi|333351964|gb|AFIZ01000043.1| 16550 16834 2 + 285 Phenylacetate-CoA oxygenase, PaaH subunit - none -
fig|6666666.65907.peg.547 CDS gi|333351964|gb|AFIZ01000043.1| 16831 17691 1 + 861 Phenylacetate-CoA oxygenase, PaaI subunit - none -
fig|6666666.65907.peg.548 CDS gi|333351964|gb|AFIZ01000043.1| 17688 18248 3 + 561 Phenylacetate-CoA oxygenase, PaaJ subunit - none -
fig|6666666.65907.peg.549 CDS gi|333351964|gb|AFIZ01000043.1| 18248 19405 2 + 1158 Phenylacetate-CoA oxygenase/reductase, PaaK subunit - none -
fig|6666666.65907.peg.550 CDS gi|333351964|gb|AFIZ01000043.1| 19398 20195 3 + 798 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.551 CDS gi|333351964|gb|AFIZ01000043.1| 20192 21421 2 + 1230 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65907.peg.552 CDS gi|333351964|gb|AFIZ01000043.1| 21418 22227 1 + 810 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.553 CDS gi|333351964|gb|AFIZ01000043.1| 22230 23111 3 + 882 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.554 CDS gi|333351964|gb|AFIZ01000043.1| 23773 23102 -1 - 672 putative integral membrane protein - none -
fig|6666666.65907.peg.555 CDS gi|333351964|gb|AFIZ01000043.1| 25133 23904 -2 - 1230 hypothetical protein - none -
fig|6666666.65907.peg.556 CDS gi|333351964|gb|AFIZ01000043.1| 25804 25130 -1 - 675 hypothetical protein - none -
fig|6666666.65907.peg.557 CDS gi|333351964|gb|AFIZ01000043.1| 26547 26074 -3 - 474 FIG00548554: hypothetical protein - none -
fig|6666666.65907.peg.558 CDS gi|333351964|gb|AFIZ01000043.1| 26663 28825 2 + 2163 Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Aromatic Amin Catabolism
fig|6666666.65907.peg.559 CDS gi|333351964|gb|AFIZ01000043.1| 28825 29292 1 + 468 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.65907.peg.560 CDS gi|333351964|gb|AFIZ01000043.1| 30758 29445 -2 - 1314 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) - none -
fig|6666666.65907.peg.561 CDS gi|333351964|gb|AFIZ01000043.1| 30849 30974 3 + 126 hypothetical protein - none -
fig|6666666.65907.peg.562 CDS gi|333351964|gb|AFIZ01000043.1| 31578 30961 -3 - 618 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.563 CDS gi|333351964|gb|AFIZ01000043.1| 31728 33488 3 + 1761 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.564 CDS gi|333351964|gb|AFIZ01000043.1| 33703 35202 1 + 1500 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.565 CDS gi|333351964|gb|AFIZ01000043.1| 35501 36274 2 + 774 Transcriptional regulator, MarR family - none -
fig|6666666.65907.peg.566 CDS gi|333351964|gb|AFIZ01000043.1| 37621 37073 -1 - 549 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65907.peg.567 CDS gi|333351964|gb|AFIZ01000043.1| 38548 37643 -1 - 906 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65907.peg.568 CDS gi|333351964|gb|AFIZ01000043.1| 39245 38556 -2 - 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65907.peg.569 CDS gi|333351964|gb|AFIZ01000043.1| 39389 41047 2 + 1659 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65907.peg.570 CDS gi|333351964|gb|AFIZ01000043.1| 42278 41079 -2 - 1200 Protein RtcB - none -
fig|6666666.65907.peg.571 CDS gi|333351964|gb|AFIZ01000043.1| 42626 42486 -2 - 141 hypothetical protein - none -
fig|6666666.65907.peg.572 CDS gi|333351964|gb|AFIZ01000043.1| 44102 42990 -2 - 1113 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65907.peg.573 CDS gi|333351964|gb|AFIZ01000043.1| 44178 45035 3 + 858 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65907.peg.574 CDS gi|333351964|gb|AFIZ01000043.1| 46754 45042 -2 - 1713 hypothetical protein - none -
fig|6666666.65907.peg.575 CDS gi|333351965|gb|AFIZ01000042.1| 456 163 -3 - 294 Muconolactone isomerase (EC 5.3.3.4) Catechol branch of beta-ketoadipate pathway
fig|6666666.65907.peg.576 CDS gi|333351965|gb|AFIZ01000042.1| 1650 520 -3 - 1131 Muconate cycloisomerase (EC 5.5.1.1) Catechol branch of beta-ketoadipate pathway;
Muconate lactonizing enzyme family
fig|6666666.65907.peg.577 CDS gi|333351965|gb|AFIZ01000042.1| 2625 1762 -3 - 864 Catechol 1,2-dioxygenase (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.65907.peg.578 CDS gi|333351965|gb|AFIZ01000042.1| 2893 4497 1 + 1605 Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) Aromatic dioxygenase mess;
Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65907.peg.579 CDS gi|333351965|gb|AFIZ01000042.1| 4541 5047 2 + 507 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) Aromatic dioxygenase mess;
Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65907.peg.580 CDS gi|333351965|gb|AFIZ01000042.1| 5059 6099 1 + 1041 benzoate dioxygenase, ferredoxin reductase component - none -
fig|6666666.65907.peg.581 CDS gi|333351965|gb|AFIZ01000042.1| 6096 6926 3 + 831 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) Benzoate degradation;
Phenylpropionate Degradation
fig|6666666.65907.peg.582 CDS gi|333351965|gb|AFIZ01000042.1| 6958 9603 1 + 2646 hypothetical protein - none -
fig|6666666.65907.peg.583 CDS gi|333351965|gb|AFIZ01000042.1| 9733 10521 1 + 789 Pca regulon regulatory protein PcaR Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.584 CDS gi|333351965|gb|AFIZ01000042.1| 10828 12090 1 + 1263 Benzoate transport protein Benzoate degradation
fig|6666666.65907.peg.585 CDS gi|333351965|gb|AFIZ01000042.1| 14767 12095 -1 - 2673 hypothetical protein - none -
fig|6666666.65907.peg.586 CDS gi|333351965|gb|AFIZ01000042.1| 16436 14871 -2 - 1566 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3) Aromatic Amin Catabolism
fig|6666666.65907.peg.587 CDS gi|333351965|gb|AFIZ01000042.1| 17089 16517 -1 - 573 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) Aromatic Amin Catabolism
fig|6666666.65907.peg.588 CDS gi|333351965|gb|AFIZ01000042.1| 17542 18918 1 + 1377 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65907.peg.589 CDS gi|333351965|gb|AFIZ01000042.1| 19756 19016 -1 - 741 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.65907.peg.590 CDS gi|333351965|gb|AFIZ01000042.1| 19879 20655 1 + 777 Pca regulon regulatory protein PcaR Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.591 CDS gi|333351965|gb|AFIZ01000042.1| 20695 21945 1 + 1251 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.65907.peg.592 CDS gi|333351965|gb|AFIZ01000042.1| 21959 22747 2 + 789 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.593 CDS gi|333351965|gb|AFIZ01000042.1| 24400 23048 -1 - 1353 4-hydroxybenzoate transporter Gentisate degradation;
Salicylate and gentisate catabolism;
p-Hydroxybenzoate degradation
fig|6666666.65907.peg.594 CDS gi|333351965|gb|AFIZ01000042.1| 25868 24672 -2 - 1197 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) p-Hydroxybenzoate degradation
fig|6666666.65907.peg.595 CDS gi|333351965|gb|AFIZ01000042.1| 26293 25868 -1 - 426 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.596 CDS gi|333351965|gb|AFIZ01000042.1| 27581 26286 -2 - 1296 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.597 CDS gi|333351965|gb|AFIZ01000042.1| 28274 27630 -2 - 645 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.598 CDS gi|333351965|gb|AFIZ01000042.1| 28979 28287 -2 - 693 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.599 CDS gi|333351965|gb|AFIZ01000042.1| 29900 29202 -2 - 699 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65907.peg.600 CDS gi|333351965|gb|AFIZ01000042.1| 30530 29913 -2 - 618 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65907.peg.601 CDS gi|333351965|gb|AFIZ01000042.1| 32389 30761 -1 - 1629 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65907.peg.602 CDS gi|333351965|gb|AFIZ01000042.1| 34779 33022 -3 - 1758 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.603 CDS gi|333351965|gb|AFIZ01000042.1| 34944 35180 3 + 237 hypothetical protein - none -
fig|6666666.65907.peg.604 CDS gi|333351965|gb|AFIZ01000042.1| 35661 35185 -3 - 477 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65907.peg.605 CDS gi|333351965|gb|AFIZ01000042.1| 36213 36037 -3 - 177 hypothetical protein - none -
fig|6666666.65907.peg.606 CDS gi|333351965|gb|AFIZ01000042.1| 37209 36571 -3 - 639 FIG00544229: hypothetical protein - none -
fig|6666666.65907.peg.607 CDS gi|333351965|gb|AFIZ01000042.1| 37294 40005 1 + 2712 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65907.peg.608 CDS gi|333351965|gb|AFIZ01000042.1| 40039 40473 1 + 435 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65907.peg.609 CDS gi|333351965|gb|AFIZ01000042.1| 40466 41281 2 + 816 hypothetical protein - none -
fig|6666666.65907.peg.610 CDS gi|333351965|gb|AFIZ01000042.1| 42020 41298 -2 - 723 hypothetical protein - none -
fig|6666666.65907.peg.611 CDS gi|333351965|gb|AFIZ01000042.1| 42527 42027 -2 - 501 hypothetical protein - none -
fig|6666666.65907.peg.612 CDS gi|333351965|gb|AFIZ01000042.1| 44269 42599 -1 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.613 CDS gi|333351965|gb|AFIZ01000042.1| 45423 44515 -3 - 909 hypothetical protein - none -
fig|6666666.65907.peg.614 CDS gi|333351965|gb|AFIZ01000042.1| 46110 45520 -3 - 591 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65907.peg.615 CDS gi|333351965|gb|AFIZ01000042.1| 48521 46275 -2 - 2247 Copper resistance protein D Copper homeostasis
fig|6666666.65907.peg.616 CDS gi|333351965|gb|AFIZ01000042.1| 48474 48599 3 + 126 hypothetical protein - none -
fig|6666666.65907.peg.617 CDS gi|333351965|gb|AFIZ01000042.1| 49309 48698 -1 - 612 GCN5-related N-acetyltransferase - none -
fig|6666666.65907.peg.618 CDS gi|333351965|gb|AFIZ01000042.1| 49414 50241 1 + 828 short-chain dehydrogenase - none -
fig|6666666.65907.peg.619 CDS gi|333351965|gb|AFIZ01000042.1| 50257 50886 1 + 630 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65907.peg.620 CDS gi|333351965|gb|AFIZ01000042.1| 51307 51675 1 + 369 Transcriptional regulator, ArsR family - none -
fig|6666666.65907.peg.621 CDS gi|333351965|gb|AFIZ01000042.1| 51672 53600 3 + 1929 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65907.peg.622 CDS gi|333351965|gb|AFIZ01000042.1| 54039 53680 -3 - 360 hypothetical protein - none -
fig|6666666.65907.peg.623 CDS gi|333351965|gb|AFIZ01000042.1| 55102 54041 -1 - 1062 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.624 CDS gi|333351965|gb|AFIZ01000042.1| 56191 55115 -1 - 1077 hypothetical protein - none -
fig|6666666.65907.peg.625 CDS gi|333351965|gb|AFIZ01000042.1| 58878 56212 -3 - 2667 hypothetical protein - none -
fig|6666666.65907.peg.626 CDS gi|333351965|gb|AFIZ01000042.1| 58973 59926 2 + 954 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65907.peg.627 CDS gi|333351965|gb|AFIZ01000042.1| 59986 60558 1 + 573 hypothetical membrane protein - none -
fig|6666666.65907.peg.628 CDS gi|333351965|gb|AFIZ01000042.1| 61833 61117 -3 - 717 O-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65907.peg.629 CDS gi|333351965|gb|AFIZ01000042.1| 61923 64037 3 + 2115 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.65907.peg.630 CDS gi|333351965|gb|AFIZ01000042.1| 64081 65148 1 + 1068 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.65907.peg.631 CDS gi|333351965|gb|AFIZ01000042.1| 66871 65429 -1 - 1443 hypothetical protein - none -
fig|6666666.65907.peg.632 CDS gi|333351965|gb|AFIZ01000042.1| 66958 67926 1 + 969 iron compound ABC transporter, periplasmic iron-compound-binding protein - none -
fig|6666666.65907.peg.633 CDS gi|333351965|gb|AFIZ01000042.1| 69496 68018 -1 - 1479 hypothetical protein - none -
fig|6666666.65907.peg.634 CDS gi|333351965|gb|AFIZ01000042.1| 69834 70043 3 + 210 COG1669: Predicted nucleotidyltransferases - none -
fig|6666666.65907.peg.635 CDS gi|333351965|gb|AFIZ01000042.1| 70887 70111 -3 - 777 YbbM seven transmembrane helix protein Broadly distributed proteins not in subsystems
fig|6666666.65907.peg.636 CDS gi|333351965|gb|AFIZ01000042.1| 71537 70884 -2 - 654 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.637 CDS gi|333351965|gb|AFIZ01000042.1| 72349 71534 -1 - 816 Transcriptional regulators - none -
fig|6666666.65907.peg.638 CDS gi|333351965|gb|AFIZ01000042.1| 72543 72659 3 + 117 hypothetical protein - none -
fig|6666666.65907.peg.639 CDS gi|333351965|gb|AFIZ01000042.1| 73984 72665 -1 - 1320 hypothetical protein - none -
fig|6666666.65907.peg.640 CDS gi|333351965|gb|AFIZ01000042.1| 74514 75545 3 + 1032 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.65907.peg.641 CDS gi|333351965|gb|AFIZ01000042.1| 75646 76641 1 + 996 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.65907.peg.642 CDS gi|333351965|gb|AFIZ01000042.1| 76634 77644 2 + 1011 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.65907.peg.643 CDS gi|333351965|gb|AFIZ01000042.1| 77641 78396 1 + 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.65907.peg.644 CDS gi|333351965|gb|AFIZ01000042.1| 78414 78995 3 + 582 putative membrane protein - none -
fig|6666666.65907.peg.645 CDS gi|333351965|gb|AFIZ01000042.1| 79038 80039 3 + 1002 FIG00546389: hypothetical protein - none -
fig|6666666.65907.peg.646 CDS gi|333351965|gb|AFIZ01000042.1| 80081 80593 2 + 513 NADH-FMN oxidoreductase - none -
fig|6666666.65907.peg.647 CDS gi|333351965|gb|AFIZ01000042.1| 81816 80590 -3 - 1227 putative lipoprotein - none -
fig|6666666.65907.peg.648 CDS gi|333351965|gb|AFIZ01000042.1| 83093 82680 -2 - 414 putative membrane protein - none -
fig|6666666.65907.peg.649 CDS gi|333351965|gb|AFIZ01000042.1| 84222 83104 -3 - 1119 putative ammonia monooxygenase - none -
fig|6666666.65907.peg.650 CDS gi|333351965|gb|AFIZ01000042.1| 84500 84222 -2 - 279 FIG00544190: hypothetical protein - none -
fig|6666666.65907.peg.651 CDS gi|333351965|gb|AFIZ01000042.1| 84564 85109 3 + 546 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65907.peg.652 CDS gi|333351965|gb|AFIZ01000042.1| 85310 85744 2 + 435 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.65907.peg.653 CDS gi|333351965|gb|AFIZ01000042.1| 85750 86142 1 + 393 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.654 CDS gi|333351965|gb|AFIZ01000042.1| 87537 86161 -3 - 1377 Metal-dependent amidase/aminoacylase/carboxypeptidase (EC 3.5.1.32) - none -
fig|6666666.65907.peg.655 CDS gi|333351965|gb|AFIZ01000042.1| 88255 87590 -1 - 666 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65907.peg.656 CDS gi|333351965|gb|AFIZ01000042.1| 89048 88266 -2 - 783 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.65907.peg.657 CDS gi|333351965|gb|AFIZ01000042.1| 89886 89059 -3 - 828 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.65907.peg.658 CDS gi|333351965|gb|AFIZ01000042.1| 90749 89904 -2 - 846 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.659 CDS gi|333351965|gb|AFIZ01000042.1| 91317 90727 -3 - 591 hypothetical protein - none -
fig|6666666.65907.peg.660 CDS gi|333351965|gb|AFIZ01000042.1| 92444 91314 -2 - 1131 possible hydrolase - none -
fig|6666666.65907.peg.661 CDS gi|333351965|gb|AFIZ01000042.1| 93054 92431 -3 - 624 Transcriptional regulatory protein - none -
fig|6666666.65907.peg.662 CDS gi|333351965|gb|AFIZ01000042.1| 93331 93059 -1 - 273 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65907.peg.663 CDS gi|333351965|gb|AFIZ01000042.1| 93509 94873 2 + 1365 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.65907.peg.664 CDS gi|333351965|gb|AFIZ01000042.1| 94885 96927 1 + 2043 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65907.peg.665 CDS gi|333351965|gb|AFIZ01000042.1| 96982 98556 1 + 1575 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.666 CDS gi|333351965|gb|AFIZ01000042.1| 99447 98605 -3 - 843 FIG00546117: hypothetical protein - none -
fig|6666666.65907.peg.667 CDS gi|333351965|gb|AFIZ01000042.1| 100719 99451 -3 - 1269 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65907.peg.668 CDS gi|333351965|gb|AFIZ01000042.1| 102515 100815 -2 - 1701 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65907.peg.669 CDS gi|333351965|gb|AFIZ01000042.1| 102486 102608 3 + 123 hypothetical protein - none -
fig|6666666.65907.peg.670 CDS gi|333351965|gb|AFIZ01000042.1| 103866 102868 -3 - 999 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) - none -
fig|6666666.65907.peg.671 CDS gi|333351965|gb|AFIZ01000042.1| 104298 104792 3 + 495 ferritin - none -
fig|6666666.65907.peg.672 CDS gi|333351966|gb|AFIZ01000041.1| 193 618 1 + 426 hypothetical protein - none -
fig|6666666.65907.peg.673 CDS gi|333351966|gb|AFIZ01000041.1| 1810 719 -1 - 1092 Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65907.peg.674 CDS gi|333351966|gb|AFIZ01000041.1| 2900 1812 -2 - 1089 Phosphomevalonate kinase (EC 2.7.4.2) Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.675 CDS gi|333351966|gb|AFIZ01000041.1| 3916 2897 -1 - 1020 Diphosphomevalonate decarboxylase (EC 4.1.1.33) Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.676 CDS gi|333351966|gb|AFIZ01000041.1| 4881 3913 -3 - 969 Mevalonate kinase (EC 2.7.1.36) Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.677 CDS gi|333351966|gb|AFIZ01000041.1| 5053 6990 1 + 1938 Xanthine-uracil permease - none -
fig|6666666.65907.peg.678 CDS gi|333351966|gb|AFIZ01000041.1| 8118 6994 -3 - 1125 hypothetical protein - none -
fig|6666666.65907.peg.679 CDS gi|333351966|gb|AFIZ01000041.1| 9147 8164 -3 - 984 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65907.peg.680 CDS gi|333351966|gb|AFIZ01000041.1| 9365 10357 2 + 993 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.681 CDS gi|333351966|gb|AFIZ01000041.1| 11668 10373 -1 - 1296 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65907.peg.682 CDS gi|333351966|gb|AFIZ01000041.1| 12895 11828 -1 - 1068 Quercetin 2,3-dioxygenase (EC 1.13.11.24) Aromatic dioxygenase mess;
Dioxygenases (EC 1.13.11.-)
fig|6666666.65907.peg.683 CDS gi|333351966|gb|AFIZ01000041.1| 13848 12892 -3 - 957 Esterase/lipase - none -
fig|6666666.65907.peg.684 CDS gi|333351966|gb|AFIZ01000041.1| 14066 15091 2 + 1026 Transcriptional regulator, LacI family - none -
fig|6666666.65907.peg.685 CDS gi|333351966|gb|AFIZ01000041.1| 15103 15915 1 + 813 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.65907.peg.686 CDS gi|333351966|gb|AFIZ01000041.1| 15924 16997 3 + 1074 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.687 CDS gi|333351967|gb|AFIZ01000040.1| 127 285 1 + 159 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.65907.peg.688 CDS gi|333351967|gb|AFIZ01000040.1| 2623 773 -1 - 1851 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65907.peg.689 CDS gi|333351967|gb|AFIZ01000040.1| 2995 4050 1 + 1056 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65907.peg.690 CDS gi|333351967|gb|AFIZ01000040.1| 4096 5580 1 + 1485 Possible integral membrane protein - none -
fig|6666666.65907.peg.691 CDS gi|333351967|gb|AFIZ01000040.1| 5702 7108 2 + 1407 hypothetical protein - none -
fig|6666666.65907.peg.692 CDS gi|333351967|gb|AFIZ01000040.1| 7154 7720 2 + 567 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65907.peg.693 CDS gi|333351967|gb|AFIZ01000040.1| 7724 8404 2 + 681 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.65907.peg.694 CDS gi|333351967|gb|AFIZ01000040.1| 8401 9036 1 + 636 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65907.peg.695 CDS gi|333351967|gb|AFIZ01000040.1| 9033 10229 3 + 1197 hypothetical protein - none -
fig|6666666.65907.peg.696 CDS gi|333351967|gb|AFIZ01000040.1| 10781 11050 2 + 270 SSU ribosomal protein S20p - none -
fig|6666666.65907.peg.697 CDS gi|333351967|gb|AFIZ01000040.1| 11198 12274 2 + 1077 hypothetical protein - none -
fig|6666666.65907.peg.698 CDS gi|333351967|gb|AFIZ01000040.1| 12576 12379 -3 - 198 hypothetical protein - none -
fig|6666666.65907.peg.699 CDS gi|333351967|gb|AFIZ01000040.1| 12575 15412 2 + 2838 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.700 CDS gi|333351967|gb|AFIZ01000040.1| 15409 18744 1 + 3336 hypothetical protein - none -
fig|6666666.65907.peg.701 CDS gi|333351967|gb|AFIZ01000040.1| 20616 18754 -3 - 1863 Flavin-containing monooxygenase - none -
fig|6666666.65907.peg.702 CDS gi|333351967|gb|AFIZ01000040.1| 20668 20799 1 + 132 hypothetical protein - none -
fig|6666666.65907.peg.703 CDS gi|333351967|gb|AFIZ01000040.1| 22432 20891 -1 - 1542 Aromatic amino acid transport protein AroP - none -
fig|6666666.65907.peg.704 CDS gi|333351967|gb|AFIZ01000040.1| 24010 22541 -1 - 1470 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65907.peg.705 CDS gi|333351967|gb|AFIZ01000040.1| 25352 24003 -2 - 1350 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.65907.peg.706 CDS gi|333351967|gb|AFIZ01000040.1| 26871 25852 -3 - 1020 hypothetical protein - none -
fig|6666666.65907.peg.707 CDS gi|333351967|gb|AFIZ01000040.1| 28109 26868 -2 - 1242 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) Pyruvate Alanine Serine Interconversions
fig|6666666.65907.peg.708 CDS gi|333351967|gb|AFIZ01000040.1| 28260 29882 3 + 1623 regulatory protein - none -
fig|6666666.65907.peg.709 CDS gi|333351967|gb|AFIZ01000040.1| 31200 29842 -3 - 1359 putative efflux membrane protein - none -
fig|6666666.65907.peg.710 CDS gi|333351967|gb|AFIZ01000040.1| 32536 31250 -1 - 1287 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.65907.peg.711 CDS gi|333351967|gb|AFIZ01000040.1| 33165 32533 -3 - 633 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3 - none -
fig|6666666.65907.peg.712 CDS gi|333351967|gb|AFIZ01000040.1| 34289 33165 -2 - 1125 hypothetical protein - none -
fig|6666666.65907.peg.713 CDS gi|333351967|gb|AFIZ01000040.1| 35441 34623 -2 - 819 Transcriptional regulator, IclR family - none -
fig|6666666.65907.peg.714 CDS gi|333351967|gb|AFIZ01000040.1| 35564 36748 2 + 1185 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.65907.peg.715 CDS gi|333351967|gb|AFIZ01000040.1| 36748 37863 1 + 1116 L-carnitine dehydratase/bile acid-inducible protein F - none -
fig|6666666.65907.peg.716 CDS gi|333351967|gb|AFIZ01000040.1| 38031 37900 -3 - 132 hypothetical protein - none -
fig|6666666.65907.peg.717 CDS gi|333351967|gb|AFIZ01000040.1| 38177 39172 2 + 996 hypothetical protein - none -
fig|6666666.65907.peg.718 CDS gi|333351967|gb|AFIZ01000040.1| 40755 39325 -3 - 1431 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle
fig|6666666.65907.peg.719 CDS gi|333351967|gb|AFIZ01000040.1| 42115 40778 -1 - 1338 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.720 CDS gi|333351967|gb|AFIZ01000040.1| 43113 42136 -3 - 978 Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1) Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.721 CDS gi|333351967|gb|AFIZ01000040.1| 44243 43116 -2 - 1128 Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1) Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.722 CDS gi|333351967|gb|AFIZ01000040.1| 45516 44260 -3 - 1257 Oxalate/formate antiporter - none -
fig|6666666.65907.peg.723 CDS gi|333351967|gb|AFIZ01000040.1| 46672 45716 -1 - 957 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65907.peg.724 CDS gi|333351967|gb|AFIZ01000040.1| 48782 46683 -2 - 2100 hypothetical protein - none -
fig|6666666.65907.peg.725 CDS gi|333351967|gb|AFIZ01000040.1| 49521 48763 -3 - 759 competence protein - none -
fig|6666666.65907.peg.726 CDS gi|333351967|gb|AFIZ01000040.1| 50786 49737 -2 - 1050 Hypothetical protein DUF194, DegV family - none -
fig|6666666.65907.peg.727 CDS gi|333351967|gb|AFIZ01000040.1| 51532 50786 -1 - 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65907.peg.728 CDS gi|333351967|gb|AFIZ01000040.1| 52042 51542 -1 - 501 Iojap protein - none -
fig|6666666.65907.peg.729 CDS gi|333351967|gb|AFIZ01000040.1| 52884 52114 -3 - 771 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65907.peg.730 CDS gi|333351967|gb|AFIZ01000040.1| 53097 54002 3 + 906 membrane protein, putative - none -
fig|6666666.65907.peg.731 CDS gi|333351967|gb|AFIZ01000040.1| 54783 54025 -3 - 759 hypothetical protein - none -
fig|6666666.65907.peg.732 CDS gi|333351967|gb|AFIZ01000040.1| 56171 54873 -2 - 1299 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65907.peg.733 CDS gi|333351967|gb|AFIZ01000040.1| 57573 56251 -3 - 1323 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.65907.peg.734 CDS gi|333351967|gb|AFIZ01000040.1| 59209 57620 -1 - 1590 COG0536: GTP-binding protein Obg - none -
fig|6666666.65907.peg.735 CDS gi|333351967|gb|AFIZ01000040.1| 59645 59367 -2 - 279 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65907.peg.736 CDS gi|333351967|gb|AFIZ01000040.1| 60005 59703 -2 - 303 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65907.peg.737 CDS gi|333351967|gb|AFIZ01000040.1| 63781 60257 -1 - 3525 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.65907.peg.738 CDS gi|333351967|gb|AFIZ01000040.1| 64071 64664 3 + 594 hypothetical protein - none -
fig|6666666.65907.peg.739 CDS gi|333351967|gb|AFIZ01000040.1| 64752 65471 3 + 720 hypothetical protein - none -
fig|6666666.65907.peg.740 CDS gi|333351967|gb|AFIZ01000040.1| 65927 65487 -2 - 441 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.65907.peg.741 CDS gi|333351967|gb|AFIZ01000040.1| 66000 67079 3 + 1080 hypothetical protein - none -
fig|6666666.65907.peg.742 CDS gi|333351967|gb|AFIZ01000040.1| 67933 67358 -1 - 576 reductase - none -
fig|6666666.65907.peg.743 CDS gi|333351967|gb|AFIZ01000040.1| 68438 67965 -2 - 474 Putative membrane protein - none -
fig|6666666.65907.peg.744 CDS gi|333351967|gb|AFIZ01000040.1| 69028 68444 -1 - 585 Lysine decarboxylase family - none -
fig|6666666.65907.peg.745 CDS gi|333351967|gb|AFIZ01000040.1| 70560 69025 -3 - 1536 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65907.peg.746 CDS gi|333351967|gb|AFIZ01000040.1| 73355 70560 -2 - 2796 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65907.peg.747 CDS gi|333351967|gb|AFIZ01000040.1| 74220 73822 -3 - 399 predicted transcriptional regulator - none -
fig|6666666.65907.peg.748 CDS gi|333351967|gb|AFIZ01000040.1| 74461 74297 -1 - 165 hypothetical protein - none -
fig|6666666.65907.peg.749 CDS gi|333351967|gb|AFIZ01000040.1| 74444 77884 2 + 3441 helicase (Snf2/Rad54 family) - none -
fig|6666666.65907.peg.750 CDS gi|333351967|gb|AFIZ01000040.1| 77994 80801 3 + 2808 Adenine-specific DNA methylase containing a Zn-ribbon - none -
fig|6666666.65907.peg.751 CDS gi|333351967|gb|AFIZ01000040.1| 80830 84378 1 + 3549 hypothetical protein - none -
fig|6666666.65907.peg.752 CDS gi|333351967|gb|AFIZ01000040.1| 84693 84463 -3 - 231 Mobile element protein - none -
fig|6666666.65907.peg.753 CDS gi|333351968|gb|AFIZ01000039.1| 165 1079 3 + 915 Nitroreductase - none -
fig|6666666.65907.peg.754 CDS gi|333351968|gb|AFIZ01000039.1| 1076 1816 2 + 741 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65907.peg.755 CDS gi|333351968|gb|AFIZ01000039.1| 1976 3067 2 + 1092 monooxygenase - none -
fig|6666666.65907.peg.756 CDS gi|333351968|gb|AFIZ01000039.1| 6530 3129 -2 - 3402 probable RuBisCo-expression protein CbbX CO2 uptake, carboxysome
fig|6666666.65907.peg.757 CDS gi|333351968|gb|AFIZ01000039.1| 6702 8483 3 + 1782 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65907.peg.758 CDS gi|333351968|gb|AFIZ01000039.1| 9691 8459 -1 - 1233 Benzoate transport protein Benzoate degradation
fig|6666666.65907.peg.759 CDS gi|333351968|gb|AFIZ01000039.1| 10813 9725 -1 - 1089 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4) Acetoin, butanediol metabolism
fig|6666666.65907.peg.760 CDS gi|333351968|gb|AFIZ01000039.1| 12057 10870 -3 - 1188 Glycerate kinase (EC 2.7.1.31) Allantoin Utilization;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65907.peg.761 CDS gi|333351968|gb|AFIZ01000039.1| 12253 12137 -1 - 117 hypothetical protein - none -
fig|6666666.65907.peg.762 CDS gi|333351968|gb|AFIZ01000039.1| 12239 13762 2 + 1524 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4) - none -
fig|6666666.65907.peg.763 CDS gi|333351968|gb|AFIZ01000039.1| 13759 16209 1 + 2451 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) Purine Utilization
fig|6666666.65907.peg.764 CDS gi|333351968|gb|AFIZ01000039.1| 16206 17018 3 + 813 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase) - none -
fig|6666666.65907.peg.765 CDS gi|333351968|gb|AFIZ01000039.1| 18003 16984 -3 - 1020 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65907.peg.766 CDS gi|333351968|gb|AFIZ01000039.1| 18786 18022 -3 - 765 hypothetical protein - none -
fig|6666666.65907.peg.767 CDS gi|333351968|gb|AFIZ01000039.1| 18885 19733 3 + 849 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65907.peg.768 CDS gi|333351968|gb|AFIZ01000039.1| 21237 19855 -3 - 1383 putative peptidase - none -
fig|6666666.65907.peg.769 CDS gi|333351968|gb|AFIZ01000039.1| 22096 21245 -1 - 852 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.770 CDS gi|333351968|gb|AFIZ01000039.1| 22951 22157 -1 - 795 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65907.peg.771 CDS gi|333351968|gb|AFIZ01000039.1| 22981 24453 1 + 1473 Integral membrane protein - none -
fig|6666666.65907.peg.772 CDS gi|333351968|gb|AFIZ01000039.1| 24759 25058 3 + 300 hypothetical protein - none -
fig|6666666.65907.peg.773 CDS gi|333351968|gb|AFIZ01000039.1| 26273 25098 -2 - 1176 Gluconate transporter family protein - none -
fig|6666666.65907.peg.774 CDS gi|333351968|gb|AFIZ01000039.1| 27998 26583 -2 - 1416 PLP-dependent aminotransferase NCgl2355 (class III) - none -
fig|6666666.65907.peg.775 CDS gi|333351968|gb|AFIZ01000039.1| 29570 28059 -2 - 1512 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) - none -
fig|6666666.65907.peg.776 CDS gi|333351968|gb|AFIZ01000039.1| 29668 31284 1 + 1617 putative regulatory protein - none -
fig|6666666.65907.peg.777 CDS gi|333351968|gb|AFIZ01000039.1| 32783 31326 -2 - 1458 Gluconate transporter family protein - none -
fig|6666666.65907.peg.778 CDS gi|333351968|gb|AFIZ01000039.1| 32919 33140 3 + 222 hypothetical protein - none -
fig|6666666.65907.peg.779 CDS gi|333351968|gb|AFIZ01000039.1| 34815 33355 -3 - 1461 hypothetical protein - none -
fig|6666666.65907.peg.780 CDS gi|333351968|gb|AFIZ01000039.1| 35489 34812 -2 - 678 hypothetical protein - none -
fig|6666666.65907.peg.781 CDS gi|333351968|gb|AFIZ01000039.1| 36039 35656 -3 - 384 hypothetical protein - none -
fig|6666666.65907.peg.782 CDS gi|333351968|gb|AFIZ01000039.1| 37836 36148 -3 - 1689 hypothetical protein - none -
fig|6666666.65907.peg.783 CDS gi|333351968|gb|AFIZ01000039.1| 37942 39060 1 + 1119 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.784 CDS gi|333351968|gb|AFIZ01000039.1| 39155 40627 2 + 1473 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65907.peg.785 CDS gi|333351968|gb|AFIZ01000039.1| 41100 42740 3 + 1641 hypothetical protein - none -
fig|6666666.65907.peg.786 CDS gi|333351968|gb|AFIZ01000039.1| 42812 43414 2 + 603 hypothetical protein - none -
fig|6666666.65907.peg.787 CDS gi|333351968|gb|AFIZ01000039.1| 44372 43404 -2 - 969 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.65907.peg.788 CDS gi|333351968|gb|AFIZ01000039.1| 47835 44392 -3 - 3444 FIG007317: hypothetical protein - none -
fig|6666666.65907.peg.789 CDS gi|333351968|gb|AFIZ01000039.1| 48560 47832 -2 - 729 FIG039767: hypothetical protein - none -
fig|6666666.65907.peg.790 CDS gi|333351968|gb|AFIZ01000039.1| 50407 48557 -1 - 1851 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.65907.peg.791 CDS gi|333351968|gb|AFIZ01000039.1| 50482 51006 1 + 525 hypothetical protein - none -
fig|6666666.65907.peg.792 CDS gi|333351968|gb|AFIZ01000039.1| 51491 51003 -2 - 489 hypothetical protein - none -
fig|6666666.65907.peg.793 CDS gi|333351968|gb|AFIZ01000039.1| 51603 52130 3 + 528 hypothetical protein - none -
fig|6666666.65907.peg.794 CDS gi|333351968|gb|AFIZ01000039.1| 52791 52135 -3 - 657 hypothetical protein - none -
fig|6666666.65907.peg.795 CDS gi|333351968|gb|AFIZ01000039.1| 53410 52784 -1 - 627 N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65907.peg.796 CDS gi|333351968|gb|AFIZ01000039.1| 54792 53389 -3 - 1404 Amidase (EC 3.5.1.4) - none -
fig|6666666.65907.peg.797 CDS gi|333351968|gb|AFIZ01000039.1| 56312 54825 -2 - 1488 Na+/solute symporter - none -
fig|6666666.65907.peg.798 CDS gi|333351968|gb|AFIZ01000039.1| 56578 56309 -1 - 270 hypothetical protein - none -
fig|6666666.65907.peg.799 CDS gi|333351968|gb|AFIZ01000039.1| 57931 56585 -1 - 1347 peptidase, M20-M25-M40 family - none -
fig|6666666.65907.peg.800 CDS gi|333351968|gb|AFIZ01000039.1| 58239 60098 3 + 1860 Glycine betaine transporter OpuD Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65907.peg.801 CDS gi|333351968|gb|AFIZ01000039.1| 61052 60132 -2 - 921 hypothetical protein - none -
fig|6666666.65907.peg.802 CDS gi|333351968|gb|AFIZ01000039.1| 62393 61428 -2 - 966 hypothetical protein - none -
fig|6666666.65907.peg.803 CDS gi|333351968|gb|AFIZ01000039.1| 62565 62945 3 + 381 hypothetical protein - none -
fig|6666666.65907.peg.804 CDS gi|333351968|gb|AFIZ01000039.1| 62976 63881 3 + 906 hypothetical protein - none -
fig|6666666.65907.peg.805 CDS gi|333351968|gb|AFIZ01000039.1| 64185 63892 -3 - 294 hypothetical protein - none -
fig|6666666.65907.peg.806 CDS gi|333351968|gb|AFIZ01000039.1| 64763 65056 2 + 294 hypothetical protein - none -
fig|6666666.65907.peg.807 CDS gi|333351968|gb|AFIZ01000039.1| 65114 66307 2 + 1194 hypothetical protein - none -
fig|6666666.65907.peg.808 CDS gi|333351968|gb|AFIZ01000039.1| 66734 66973 2 + 240 Helix-turn-helix protein, CopG family - none -
fig|6666666.65907.peg.809 CDS gi|333351968|gb|AFIZ01000039.1| 67208 67023 -2 - 186 hypothetical protein - none -
fig|6666666.65907.peg.810 CDS gi|333351968|gb|AFIZ01000039.1| 67409 67735 2 + 327 hypothetical protein - none -
fig|6666666.65907.peg.811 CDS gi|333351968|gb|AFIZ01000039.1| 68782 67832 -1 - 951 hypothetical protein - none -
fig|6666666.65907.peg.812 CDS gi|333351968|gb|AFIZ01000039.1| 72132 68749 -3 - 3384 hypothetical protein - none -
fig|6666666.65907.peg.813 CDS gi|333351968|gb|AFIZ01000039.1| 72497 73186 2 + 690 hypothetical protein - none -
fig|6666666.65907.peg.814 CDS gi|333351968|gb|AFIZ01000039.1| 74321 73392 -2 - 930 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65907.peg.815 CDS gi|333351968|gb|AFIZ01000039.1| 75589 74336 -1 - 1254 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.65907.peg.816 CDS gi|333351968|gb|AFIZ01000039.1| 77053 75593 -1 - 1461 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65907.peg.817 CDS gi|333351968|gb|AFIZ01000039.1| 77205 78815 3 + 1611 hypothetical protein - none -
fig|6666666.65907.peg.818 CDS gi|333351968|gb|AFIZ01000039.1| 78868 81558 1 + 2691 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.65907.peg.819 CDS gi|333351969|gb|AFIZ01000038.1| 196 393 1 + 198 hypothetical protein - none -
fig|6666666.65907.peg.820 CDS gi|333351969|gb|AFIZ01000038.1| 397 3018 1 + 2622 hypothetical protein - none -
fig|6666666.65907.peg.821 CDS gi|333351969|gb|AFIZ01000038.1| 4901 6034 2 + 1134 FIG00543872: hypothetical protein - none -
fig|6666666.65907.peg.822 CDS gi|333351969|gb|AFIZ01000038.1| 6171 6686 3 + 516 FIG00818182: hypothetical protein - none -
fig|6666666.65907.peg.823 CDS gi|333351969|gb|AFIZ01000038.1| 6683 8446 2 + 1764 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65907.peg.824 CDS gi|333351969|gb|AFIZ01000038.1| 8446 9828 1 + 1383 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65907.peg.825 CDS gi|333351969|gb|AFIZ01000038.1| 9825 11276 3 + 1452 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.826 CDS gi|333351969|gb|AFIZ01000038.1| 11306 12982 2 + 1677 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65907.peg.827 CDS gi|333351969|gb|AFIZ01000038.1| 13068 15110 3 + 2043 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65907.peg.828 CDS gi|333351969|gb|AFIZ01000038.1| 15824 15141 -2 - 684 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65907.peg.829 CDS gi|333351969|gb|AFIZ01000038.1| 15913 16191 1 + 279 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65907.peg.830 CDS gi|333351969|gb|AFIZ01000038.1| 16771 16169 -1 - 603 FIG056164: rhomboid family serine protease - none -
fig|6666666.65907.peg.831 CDS gi|333351969|gb|AFIZ01000038.1| 17421 16885 -3 - 537 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) - none -
fig|6666666.65907.peg.832 CDS gi|333351969|gb|AFIZ01000038.1| 17600 18988 2 + 1389 Low-complexity acidic protein, XCC2875 type - none -
fig|6666666.65907.peg.833 CDS gi|333351970|gb|AFIZ01000037.1| 231 869 3 + 639 hypothetical protein - none -
fig|6666666.65907.peg.834 CDS gi|333351970|gb|AFIZ01000037.1| 872 2659 2 + 1788 67kDa Myosin-crossreactive streptococcal antigen - none -
fig|6666666.65907.peg.835 CDS gi|333351970|gb|AFIZ01000037.1| 3887 3546 -2 - 342 hypothetical protein - none -
fig|6666666.65907.peg.836 CDS gi|333351970|gb|AFIZ01000037.1| 4966 3989 -1 - 978 Putative oxidoreductase SMc00968 Quinone oxidoreductase family
fig|6666666.65907.peg.837 CDS gi|333351970|gb|AFIZ01000037.1| 5448 5026 -3 - 423 Organic hydroperoxide resistance protein CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.65907.peg.838 CDS gi|333351970|gb|AFIZ01000037.1| 5827 5450 -1 - 378 Organic hydroperoxide resistance transcriptional regulator CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.65907.peg.839 CDS gi|333351971|gb|AFIZ01000036.1| 43 804 1 + 762 putative hydrolase - none -
fig|6666666.65907.peg.840 CDS gi|333351971|gb|AFIZ01000036.1| 810 1190 3 + 381 hypothetical protein - none -
fig|6666666.65907.peg.841 CDS gi|333351971|gb|AFIZ01000036.1| 1581 1282 -3 - 300 FIG00545001: hypothetical protein - none -
fig|6666666.65907.peg.842 CDS gi|333351971|gb|AFIZ01000036.1| 2350 1712 -1 - 639 regulatory protein, LuxR - none -
fig|6666666.65907.peg.843 CDS gi|333351972|gb|AFIZ01000035.1| 143 1885 2 + 1743 Lipopolysaccharide modification acyltransferase - none -
fig|6666666.65907.peg.844 CDS gi|333351972|gb|AFIZ01000035.1| 3926 1869 -2 - 2058 oligopeptide transporter - none -
fig|6666666.65907.peg.845 CDS gi|333351972|gb|AFIZ01000035.1| 5006 4008 -2 - 999 hypothetical protein - none -
fig|6666666.65907.peg.846 CDS gi|333351972|gb|AFIZ01000035.1| 5626 5069 -1 - 558 hypothetical protein - none -
fig|6666666.65907.peg.847 CDS gi|333351972|gb|AFIZ01000035.1| 5658 7040 3 + 1383 hypothetical protein - none -
fig|6666666.65907.peg.848 CDS gi|333351972|gb|AFIZ01000035.1| 8734 7049 -1 - 1686 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65907.peg.849 CDS gi|333351972|gb|AFIZ01000035.1| 8690 8818 2 + 129 hypothetical protein - none -
fig|6666666.65907.peg.850 CDS gi|333351972|gb|AFIZ01000035.1| 9961 8837 -1 - 1125 NAD(P)H-dependent 2-cyclohexen-1-one reductase - none -
fig|6666666.65907.peg.851 CDS gi|333351972|gb|AFIZ01000035.1| 10110 11507 3 + 1398 hypothetical protein - none -
fig|6666666.65907.peg.852 CDS gi|333351972|gb|AFIZ01000035.1| 11554 12840 1 + 1287 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65907.peg.853 CDS gi|333351972|gb|AFIZ01000035.1| 14990 12852 -2 - 2139 hypothetical protein - none -
fig|6666666.65907.peg.854 CDS gi|333351972|gb|AFIZ01000035.1| 17464 14987 -1 - 2478 Phage infection protein - none -
fig|6666666.65907.peg.855 CDS gi|333351972|gb|AFIZ01000035.1| 20110 17579 -1 - 2532 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65907.peg.856 CDS gi|333351972|gb|AFIZ01000035.1| 20731 20231 -1 - 501 FIG00512104: hypothetical protein - none -
fig|6666666.65907.peg.857 CDS gi|333351973|gb|AFIZ01000034.1| 1960 470 -1 - 1491 Aromatic amino acid transport protein AroP - none -
fig|6666666.65907.peg.858 CDS gi|333351973|gb|AFIZ01000034.1| 3519 2095 -3 - 1425 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65907.peg.859 CDS gi|333351973|gb|AFIZ01000034.1| 4886 3519 -2 - 1368 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.65907.peg.860 CDS gi|333351973|gb|AFIZ01000034.1| 4998 6524 3 + 1527 hypothetical protein - none -
fig|6666666.65907.peg.861 CDS gi|333351973|gb|AFIZ01000034.1| 7376 6759 -2 - 618 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.862 CDS gi|333351973|gb|AFIZ01000034.1| 7703 9205 2 + 1503 Monoamine/putrescine oxidase (EC 1.4.3.10) Putrescine utilization pathways
fig|6666666.65907.peg.863 CDS gi|333351973|gb|AFIZ01000034.1| 9202 10149 1 + 948 universal stress protein family - none -
fig|6666666.65907.peg.864 CDS gi|333351973|gb|AFIZ01000034.1| 10153 11832 1 + 1680 amino acid transporter, putative - none -
fig|6666666.65907.peg.865 CDS gi|333351973|gb|AFIZ01000034.1| 11829 13223 3 + 1395 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65907.peg.866 CDS gi|333351973|gb|AFIZ01000034.1| 14537 13281 -2 - 1257 putative secreted protein - none -
fig|6666666.65907.peg.867 CDS gi|333351973|gb|AFIZ01000034.1| 16036 14762 -1 - 1275 hypothetical protein - none -
fig|6666666.65907.peg.868 CDS gi|333351973|gb|AFIZ01000034.1| 16125 16724 3 + 600 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.869 CDS gi|333351973|gb|AFIZ01000034.1| 16895 18538 2 + 1644 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.870 CDS gi|333351973|gb|AFIZ01000034.1| 18742 19509 1 + 768 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.871 CDS gi|333351973|gb|AFIZ01000034.1| 19509 20756 3 + 1248 nitrilotriacetate monooxygenase component A - none -
fig|6666666.65907.peg.872 CDS gi|333351973|gb|AFIZ01000034.1| 21058 22461 1 + 1404 hypothetical protein - none -
fig|6666666.65907.peg.873 CDS gi|333351973|gb|AFIZ01000034.1| 22490 23542 2 + 1053 D-amino-acid oxidase (EC 1.4.3.3) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.874 CDS gi|333351973|gb|AFIZ01000034.1| 23805 25004 3 + 1200 hypothetical protein - none -
fig|6666666.65907.peg.875 CDS gi|333351973|gb|AFIZ01000034.1| 25469 25101 -2 - 369 5-Hydroxyisourate Hydrolase (HIUase) (EC 3.5.2.17) - none -
fig|6666666.65907.peg.876 CDS gi|333351973|gb|AFIZ01000034.1| 26012 25500 -2 - 513 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase - none -
fig|6666666.65907.peg.877 CDS gi|333351973|gb|AFIZ01000034.1| 27304 26012 -1 - 1293 Guanine deaminase (EC 3.5.4.3) Purine Utilization;
Purine conversions
fig|6666666.65907.peg.878 CDS gi|333351973|gb|AFIZ01000034.1| 28889 27354 -2 - 1536 Xanthine-uracil permease - none -
fig|6666666.65907.peg.879 CDS gi|333351973|gb|AFIZ01000034.1| 29086 30006 1 + 921 hypothetical protein - none -
fig|6666666.65907.peg.880 CDS gi|333351973|gb|AFIZ01000034.1| 31291 30113 -1 - 1179 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65907.peg.881 CDS gi|333351973|gb|AFIZ01000034.1| 31973 31293 -2 - 681 hypothetical protein - none -
fig|6666666.65907.peg.882 CDS gi|333351973|gb|AFIZ01000034.1| 32378 31974 -2 - 405 endoribonuclease L-PSP family protein - none -
fig|6666666.65907.peg.883 CDS gi|333351973|gb|AFIZ01000034.1| 33796 32375 -1 - 1422 monooxygenase, putative - none -
fig|6666666.65907.peg.884 CDS gi|333351973|gb|AFIZ01000034.1| 33898 34806 1 + 909 transcriptional regulator, LysR family - none -
fig|6666666.65907.peg.885 CDS gi|333351973|gb|AFIZ01000034.1| 34954 36390 1 + 1437 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.886 CDS gi|333351973|gb|AFIZ01000034.1| 36406 37332 1 + 927 transcriptional regulator, LysR family - none -
fig|6666666.65907.peg.887 CDS gi|333351973|gb|AFIZ01000034.1| 38841 37369 -3 - 1473 putative oxidoreductase - none -
fig|6666666.65907.peg.888 CDS gi|333351973|gb|AFIZ01000034.1| 39041 38889 -2 - 153 hypothetical protein - none -
fig|6666666.65907.peg.889 CDS gi|333351973|gb|AFIZ01000034.1| 40458 39058 -3 - 1401 major facilitator family transporter - none -
fig|6666666.65907.peg.890 CDS gi|333351973|gb|AFIZ01000034.1| 41935 40562 -1 - 1374 Cell division inhibitor Persister Cells
fig|6666666.65907.peg.891 CDS gi|333351973|gb|AFIZ01000034.1| 42127 42321 1 + 195 hypothetical protein - none -
fig|6666666.65907.peg.892 CDS gi|333351973|gb|AFIZ01000034.1| 45255 42337 -3 - 2919 Fe-S protein, homolog of lactate dehydrogenase SO1521 - none -
fig|6666666.65907.peg.893 CDS gi|333351973|gb|AFIZ01000034.1| 45595 48393 1 + 2799 Endonuclease - none -
fig|6666666.65907.peg.894 CDS gi|333351973|gb|AFIZ01000034.1| 48383 49390 2 + 1008 hypothetical protein - none -
fig|6666666.65907.peg.895 CDS gi|333351973|gb|AFIZ01000034.1| 49390 51345 1 + 1956 hypothetical protein - none -
fig|6666666.65907.peg.896 CDS gi|333351973|gb|AFIZ01000034.1| 51350 52282 2 + 933 hypothetical protein - none -
fig|6666666.65907.peg.897 CDS gi|333351973|gb|AFIZ01000034.1| 52289 53032 2 + 744 hypothetical protein - none -
fig|6666666.65907.peg.898 CDS gi|333351973|gb|AFIZ01000034.1| 53127 54416 3 + 1290 hypothetical protein - none -
fig|6666666.65907.peg.899 CDS gi|333351973|gb|AFIZ01000034.1| 56576 54597 -2 - 1980 DNA-cytosine methyltransferase (EC 2.1.1.37) DNA repair, bacterial
fig|6666666.65907.peg.900 CDS gi|333351973|gb|AFIZ01000034.1| 57186 56710 -3 - 477 Very-short-patch mismatch repair endonuclease (G-T specific) DNA repair, bacterial
fig|6666666.65907.peg.901 CDS gi|333351973|gb|AFIZ01000034.1| 57340 60810 1 + 3471 hypothetical protein - none -
fig|6666666.65907.peg.902 CDS gi|333351973|gb|AFIZ01000034.1| 61025 61354 2 + 330 hypothetical protein - none -
fig|6666666.65907.peg.903 CDS gi|333351973|gb|AFIZ01000034.1| 61645 61358 -1 - 288 Helix-turn-helix motif - none -
fig|6666666.65907.peg.904 CDS gi|333351973|gb|AFIZ01000034.1| 61899 61642 -3 - 258 Phage-related protein - none -
fig|6666666.65907.peg.905 CDS gi|333351973|gb|AFIZ01000034.1| 63615 62155 -3 - 1461 drug resistance transporter, EmrB/QacA family - none -
fig|6666666.65907.peg.906 CDS gi|333351973|gb|AFIZ01000034.1| 64726 63704 -1 - 1023 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.907 CDS gi|333351973|gb|AFIZ01000034.1| 64902 65642 3 + 741 hypothetical protein - none -
fig|6666666.65907.peg.908 CDS gi|333351973|gb|AFIZ01000034.1| 66265 67665 1 + 1401 Lipase 1 (EC 3.1.1.3) - none -
fig|6666666.65907.peg.909 CDS gi|333351973|gb|AFIZ01000034.1| 69025 67754 -1 - 1272 hypothetical protein - none -
fig|6666666.65907.peg.910 CDS gi|333351973|gb|AFIZ01000034.1| 70811 69207 -2 - 1605 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65907.peg.911 CDS gi|333351973|gb|AFIZ01000034.1| 70821 70949 3 + 129 hypothetical protein - none -
fig|6666666.65907.peg.912 CDS gi|333351973|gb|AFIZ01000034.1| 71924 71043 -2 - 882 Transcriptional regulator, LysR family CBSS-349102.4.peg.3442
fig|6666666.65907.peg.913 CDS gi|333351973|gb|AFIZ01000034.1| 73584 72052 -3 - 1533 hypothetical protein - none -
fig|6666666.65907.peg.914 CDS gi|333351973|gb|AFIZ01000034.1| 73720 77283 1 + 3564 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.65907.peg.915 CDS gi|333351973|gb|AFIZ01000034.1| 78561 77782 -3 - 780 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65907.peg.916 CDS gi|333351973|gb|AFIZ01000034.1| 78612 78869 3 + 258 hypothetical protein - none -
fig|6666666.65907.peg.917 CDS gi|333351973|gb|AFIZ01000034.1| 80064 79072 -3 - 993 Diacylglycerol kinase-related protein - none -
fig|6666666.65907.peg.918 CDS gi|333351973|gb|AFIZ01000034.1| 81743 80064 -2 - 1680 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.65907.peg.919 CDS gi|333351973|gb|AFIZ01000034.1| 81892 82524 1 + 633 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.920 CDS gi|333351973|gb|AFIZ01000034.1| 82675 83607 1 + 933 polysaccharide deacetylase - none -
fig|6666666.65907.peg.921 CDS gi|333351973|gb|AFIZ01000034.1| 83666 84493 2 + 828 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.922 CDS gi|333351973|gb|AFIZ01000034.1| 84545 85693 2 + 1149 hypothetical protein - none -
fig|6666666.65907.peg.923 CDS gi|333351973|gb|AFIZ01000034.1| 86366 85749 -2 - 618 hypothetical protein - none -
fig|6666666.65907.peg.924 CDS gi|333351973|gb|AFIZ01000034.1| 86796 87521 3 + 726 putative hydrolase - none -
fig|6666666.65907.peg.925 CDS gi|333351973|gb|AFIZ01000034.1| 87607 89310 1 + 1704 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.65907.peg.926 CDS gi|333351973|gb|AFIZ01000034.1| 89992 89375 -1 - 618 hypothetical protein - none -
fig|6666666.65907.peg.927 CDS gi|333351973|gb|AFIZ01000034.1| 90155 90862 2 + 708 hypothetical protein - none -
fig|6666666.65907.peg.928 CDS gi|333351973|gb|AFIZ01000034.1| 90859 91470 1 + 612 Methyltransferase type 11 - none -
fig|6666666.65907.peg.929 CDS gi|333351973|gb|AFIZ01000034.1| 91463 92200 2 + 738 hypothetical protein - none -
fig|6666666.65907.peg.930 CDS gi|333351973|gb|AFIZ01000034.1| 92278 92574 1 + 297 hypothetical protein - none -
fig|6666666.65907.peg.931 CDS gi|333351973|gb|AFIZ01000034.1| 95531 92877 -2 - 2655 FIG00548710: hypothetical protein - none -
fig|6666666.65907.peg.932 CDS gi|333351973|gb|AFIZ01000034.1| 98160 95572 -3 - 2589 FIG00548710: hypothetical protein - none -
fig|6666666.65907.peg.933 CDS gi|333351973|gb|AFIZ01000034.1| 99171 98257 -3 - 915 putative oxidoreductase - none -
fig|6666666.65907.peg.934 CDS gi|333351973|gb|AFIZ01000034.1| 99570 99181 -3 - 390 hypothetical protein - none -
fig|6666666.65907.peg.935 CDS gi|333351973|gb|AFIZ01000034.1| 100814 99582 -2 - 1233 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) - none -
fig|6666666.65907.peg.936 CDS gi|333351973|gb|AFIZ01000034.1| 102247 100847 -1 - 1401 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.65907.peg.937 CDS gi|333351973|gb|AFIZ01000034.1| 103971 102244 -3 - 1728 putative ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.938 CDS gi|333351973|gb|AFIZ01000034.1| 104822 103980 -2 - 843 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65907.peg.939 CDS gi|333351973|gb|AFIZ01000034.1| 105778 104819 -1 - 960 putative transport protein - none -
fig|6666666.65907.peg.940 CDS gi|333351973|gb|AFIZ01000034.1| 107463 105775 -3 - 1689 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.65907.peg.941 CDS gi|333351973|gb|AFIZ01000034.1| 107597 109687 2 + 2091 FIG00544299: hypothetical protein - none -
fig|6666666.65907.peg.942 CDS gi|333351973|gb|AFIZ01000034.1| 109699 110382 1 + 684 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.65907.peg.943 CDS gi|333351973|gb|AFIZ01000034.1| 110627 111031 2 + 405 hypothetical protein - none -
fig|6666666.65907.peg.944 CDS gi|333351973|gb|AFIZ01000034.1| 111327 112352 3 + 1026 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.945 CDS gi|333351973|gb|AFIZ01000034.1| 112940 112545 -2 - 396 hypothetical protein - none -
fig|6666666.65907.peg.946 CDS gi|333351973|gb|AFIZ01000034.1| 113523 113209 -3 - 315 hypothetical protein - none -
fig|6666666.65907.peg.947 CDS gi|333351973|gb|AFIZ01000034.1| 114541 113642 -1 - 900 hypothetical protein - none -
fig|6666666.65907.peg.948 CDS gi|333351973|gb|AFIZ01000034.1| 115782 114544 -3 - 1239 Cystathionine gamma-lyase (EC 4.4.1.1) Cysteine Biosynthesis;
Glycine and Serine Utilization;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.949 CDS gi|333351973|gb|AFIZ01000034.1| 115888 116526 1 + 639 Maltose O-acetyltransferase (EC 2.3.1.79) - none -
fig|6666666.65907.peg.950 CDS gi|333351973|gb|AFIZ01000034.1| 117588 116539 -3 - 1050 hypothetical protein - none -
fig|6666666.65907.peg.951 CDS gi|333351973|gb|AFIZ01000034.1| 117798 119039 3 + 1242 putative transmembrane symporter - none -
fig|6666666.65907.peg.952 CDS gi|333351973|gb|AFIZ01000034.1| 119772 119047 -3 - 726 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65907.peg.953 CDS gi|333351973|gb|AFIZ01000034.1| 120619 119783 -1 - 837 ABC-type transporter, ATPase component - none -
fig|6666666.65907.peg.954 CDS gi|333351973|gb|AFIZ01000034.1| 121064 122410 2 + 1347 Alkane-1 monooxygenase (EC 1.14.15.3) - none -
fig|6666666.65907.peg.955 CDS gi|333351973|gb|AFIZ01000034.1| 122414 122797 2 + 384 hypothetical protein - none -
fig|6666666.65907.peg.956 CDS gi|333351973|gb|AFIZ01000034.1| 122872 123039 1 + 168 Rubredoxin Rubrerythrin
fig|6666666.65907.peg.957 CDS gi|333351973|gb|AFIZ01000034.1| 123067 123258 1 + 192 Rubredoxin Rubrerythrin
fig|6666666.65907.peg.958 CDS gi|333351973|gb|AFIZ01000034.1| 123260 124495 2 + 1236 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.65907.peg.959 CDS gi|333351973|gb|AFIZ01000034.1| 124583 126175 2 + 1593 Carboxylesterase type B - none -
fig|6666666.65907.peg.960 CDS gi|333351973|gb|AFIZ01000034.1| 126261 126611 3 + 351 MloA - none -
fig|6666666.65907.peg.961 CDS gi|333351973|gb|AFIZ01000034.1| 127502 126612 -2 - 891 Mobile element protein - none -
fig|6666666.65907.peg.962 CDS gi|333351973|gb|AFIZ01000034.1| 127852 127502 -1 - 351 Mobile element protein - none -
fig|6666666.65907.peg.963 CDS gi|333351973|gb|AFIZ01000034.1| 127983 128687 3 + 705 MloA - none -
fig|6666666.65907.peg.964 CDS gi|333351973|gb|AFIZ01000034.1| 130201 128705 -1 - 1497 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65907.peg.965 CDS gi|333351973|gb|AFIZ01000034.1| 130205 130444 2 + 240 hypothetical protein - none -
fig|6666666.65907.peg.966 CDS gi|333351973|gb|AFIZ01000034.1| 130482 131270 3 + 789 hypothetical protein - none -
fig|6666666.65907.peg.967 CDS gi|333351973|gb|AFIZ01000034.1| 132353 131325 -2 - 1029 putative secreted protein - none -
fig|6666666.65907.peg.968 CDS gi|333351973|gb|AFIZ01000034.1| 133771 132350 -1 - 1422 hypothetical protein - none -
fig|6666666.65907.peg.969 CDS gi|333351973|gb|AFIZ01000034.1| 133821 136049 3 + 2229 FIG00548710: hypothetical protein - none -
fig|6666666.65907.peg.970 CDS gi|333351973|gb|AFIZ01000034.1| 136611 136054 -3 - 558 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.65907.peg.971 CDS gi|333351973|gb|AFIZ01000034.1| 136708 137529 1 + 822 FIG00547049: hypothetical protein - none -
fig|6666666.65907.peg.972 CDS gi|333351973|gb|AFIZ01000034.1| 138550 137549 -1 - 1002 putative integral membrane protein - none -
fig|6666666.65907.peg.973 CDS gi|333351973|gb|AFIZ01000034.1| 139893 138547 -3 - 1347 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65907.peg.974 CDS gi|333351973|gb|AFIZ01000034.1| 140061 141128 3 + 1068 Oxidoreductase - none -
fig|6666666.65907.peg.975 CDS gi|333351973|gb|AFIZ01000034.1| 142987 141170 -1 - 1818 FIG00863064: hypothetical protein - none -
fig|6666666.65907.peg.976 CDS gi|333351973|gb|AFIZ01000034.1| 145137 143041 -3 - 2097 Gamma-glutamyltranspeptidase (EC 2.3.2.2) - none -
fig|6666666.65907.peg.977 CDS gi|333351973|gb|AFIZ01000034.1| 145839 145294 -3 - 546 ThiJ/PfpI family protein - none -
fig|6666666.65907.peg.978 CDS gi|333351973|gb|AFIZ01000034.1| 145866 146009 3 + 144 hypothetical protein - none -
fig|6666666.65907.peg.979 CDS gi|333351973|gb|AFIZ01000034.1| 147520 145979 -1 - 1542 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.980 CDS gi|333351973|gb|AFIZ01000034.1| 148202 147777 -2 - 426 hypothetical protein - none -
fig|6666666.65907.peg.981 CDS gi|333351973|gb|AFIZ01000034.1| 149080 148304 -1 - 777 SAM-dependent methyltransferases - none -
fig|6666666.65907.peg.982 CDS gi|333351973|gb|AFIZ01000034.1| 149651 149103 -2 - 549 Isochorismatase (EC 3.3.2.1) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65907.peg.983 CDS gi|333351973|gb|AFIZ01000034.1| 149662 150957 1 + 1296 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.65907.peg.984 CDS gi|333351973|gb|AFIZ01000034.1| 152604 150961 -3 - 1644 FIG00545909: hypothetical protein - none -
fig|6666666.65907.peg.985 CDS gi|333351973|gb|AFIZ01000034.1| 153333 152851 -3 - 483 hypothetical protein - none -
fig|6666666.65907.peg.986 CDS gi|333351973|gb|AFIZ01000034.1| 153371 153736 2 + 366 hypothetical protein - none -
fig|6666666.65907.peg.987 CDS gi|333351973|gb|AFIZ01000034.1| 155771 153843 -2 - 1929 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65907.peg.988 CDS gi|333351973|gb|AFIZ01000034.1| 157537 155771 -1 - 1767 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65907.peg.989 CDS gi|333351973|gb|AFIZ01000034.1| 157532 157678 2 + 147 hypothetical protein - none -
fig|6666666.65907.peg.990 CDS gi|333351974|gb|AFIZ01000033.1| 2080 266 -1 - 1815 Predicted membrane protein (DUF2319) - none -
fig|6666666.65907.peg.991 CDS gi|333351974|gb|AFIZ01000033.1| 3266 2073 -2 - 1194 hypothetical protein - none -
fig|6666666.65907.peg.992 CDS gi|333351974|gb|AFIZ01000033.1| 3233 3571 2 + 339 hypothetical protein - none -
fig|6666666.65907.peg.993 CDS gi|333351975|gb|AFIZ01000032.1| 1366 161 -1 - 1206 putative serine protease - none -
fig|6666666.65907.peg.994 CDS gi|333351975|gb|AFIZ01000032.1| 2190 1363 -3 - 828 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65907.peg.995 CDS gi|333351975|gb|AFIZ01000032.1| 2907 2203 -3 - 705 possible thioredoxin - none -
fig|6666666.65907.peg.996 CDS gi|333351975|gb|AFIZ01000032.1| 3659 2904 -2 - 756 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65907.peg.997 CDS gi|333351975|gb|AFIZ01000032.1| 3793 4476 1 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65907.peg.998 CDS gi|333351975|gb|AFIZ01000032.1| 5275 4724 -1 - 552 hypothetical protein - none -
fig|6666666.65907.peg.999 CDS gi|333351975|gb|AFIZ01000032.1| 5321 6604 2 + 1284 hypothetical protein - none -
fig|6666666.65907.peg.1000 CDS gi|333351975|gb|AFIZ01000032.1| 7648 6719 -1 - 930 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65907.peg.1001 CDS gi|333351975|gb|AFIZ01000032.1| 7547 7714 2 + 168 hypothetical protein - none -
fig|6666666.65907.peg.1002 CDS gi|333351975|gb|AFIZ01000032.1| 8168 7695 -2 - 474 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65907.peg.1003 CDS gi|333351975|gb|AFIZ01000032.1| 8298 8170 -3 - 129 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65907.peg.1004 CDS gi|333351975|gb|AFIZ01000032.1| 8717 8340 -2 - 378 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65907.peg.1005 CDS gi|333351975|gb|AFIZ01000032.1| 9212 11377 2 + 2166 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65907.peg.1006 CDS gi|333351975|gb|AFIZ01000032.1| 11490 12503 3 + 1014 putative secreted protein - none -
fig|6666666.65907.peg.1007 CDS gi|333351975|gb|AFIZ01000032.1| 13901 12939 -2 - 963 hypothetical protein - none -
fig|6666666.65907.peg.1008 CDS gi|333351975|gb|AFIZ01000032.1| 14858 13977 -2 - 882 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65907.peg.1009 CDS gi|333351975|gb|AFIZ01000032.1| 14970 18104 3 + 3135 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65907.peg.1010 CDS gi|333351975|gb|AFIZ01000032.1| 18101 18526 2 + 426 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65907.peg.1011 CDS gi|333351975|gb|AFIZ01000032.1| 18526 20211 1 + 1686 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65907.peg.1012 CDS gi|333351975|gb|AFIZ01000032.1| 20208 21308 3 + 1101 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65907.peg.1013 CDS gi|333351975|gb|AFIZ01000032.1| 21305 21583 2 + 279 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65907.peg.1014 CDS gi|333351975|gb|AFIZ01000032.1| 21580 22014 1 + 435 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65907.peg.1015 CDS gi|333351975|gb|AFIZ01000032.1| 22172 23281 2 + 1110 phosphoesterase, PA-phosphatase related - none -
fig|6666666.65907.peg.1016 CDS gi|333351975|gb|AFIZ01000032.1| 24919 23453 -1 - 1467 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.1017 CDS gi|333351975|gb|AFIZ01000032.1| 26157 25006 -3 - 1152 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65907.peg.1018 CDS gi|333351975|gb|AFIZ01000032.1| 26141 26254 2 + 114 hypothetical protein - none -
fig|6666666.65907.peg.1019 CDS gi|333351975|gb|AFIZ01000032.1| 28076 26454 -2 - 1623 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65907.peg.1020 CDS gi|333351975|gb|AFIZ01000032.1| 28107 28289 3 + 183 hypothetical protein - none -
fig|6666666.65907.peg.1021 CDS gi|333351975|gb|AFIZ01000032.1| 28388 29110 2 + 723 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65907.peg.1022 CDS gi|333351975|gb|AFIZ01000032.1| 29491 29126 -1 - 366 glyoxalase family protein - none -
fig|6666666.65907.peg.1023 CDS gi|333351975|gb|AFIZ01000032.1| 29594 30598 2 + 1005 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.1024 CDS gi|333351975|gb|AFIZ01000032.1| 31783 30752 -1 - 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.1025 CDS gi|333351975|gb|AFIZ01000032.1| 33163 31889 -1 - 1275 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.1026 CDS gi|333351975|gb|AFIZ01000032.1| 35227 33218 -1 - 2010 Iron-chelator utilization protein - none -
fig|6666666.65907.peg.1027 CDS gi|333351975|gb|AFIZ01000032.1| 35391 36494 3 + 1104 Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) Siderophore Enterobactin
fig|6666666.65907.peg.1028 CDS gi|333351975|gb|AFIZ01000032.1| 36560 37414 2 + 855 FIG00544278: hypothetical protein - none -
fig|6666666.65907.peg.1029 CDS gi|333351975|gb|AFIZ01000032.1| 38725 37439 -1 - 1287 integral membrane protein - none -
fig|6666666.65907.peg.1030 CDS gi|333351975|gb|AFIZ01000032.1| 38964 38812 -3 - 153 hypothetical protein - none -
fig|6666666.65907.peg.1031 CDS gi|333351975|gb|AFIZ01000032.1| 38968 40809 1 + 1842 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65907.peg.1032 CDS gi|333351975|gb|AFIZ01000032.1| 40878 42740 3 + 1863 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.65907.peg.1033 CDS gi|333351975|gb|AFIZ01000032.1| 42747 44048 3 + 1302 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65907.peg.1034 CDS gi|333351975|gb|AFIZ01000032.1| 44045 44848 2 + 804 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65907.peg.1035 CDS gi|333351975|gb|AFIZ01000032.1| 46198 45143 -1 - 1056 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65907.peg.1036 CDS gi|333351975|gb|AFIZ01000032.1| 46473 48014 3 + 1542 sodium/alanine symporter family protein - none -
fig|6666666.65907.peg.1037 CDS gi|333351975|gb|AFIZ01000032.1| 48107 48754 2 + 648 Transcriptional regulator, GntR family - none -
fig|6666666.65907.peg.1038 CDS gi|333351975|gb|AFIZ01000032.1| 48957 50471 3 + 1515 hypothetical protein - none -
fig|6666666.65907.peg.1039 CDS gi|333351975|gb|AFIZ01000032.1| 50483 51382 2 + 900 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65907.peg.1040 CDS gi|333351975|gb|AFIZ01000032.1| 51392 52876 2 + 1485 4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) Putrescine utilization pathways
fig|6666666.65907.peg.1041 CDS gi|333351975|gb|AFIZ01000032.1| 53114 55318 2 + 2205 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65907.peg.1042 CDS gi|333351975|gb|AFIZ01000032.1| 55515 56615 3 + 1101 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65907.peg.1043 CDS gi|333351975|gb|AFIZ01000032.1| 56887 56639 -1 - 249 hypothetical protein - none -
fig|6666666.65907.peg.1044 CDS gi|333351975|gb|AFIZ01000032.1| 57684 56884 -3 - 801 GTP pyrophosphokinase (EC 2.7.6.5) - none -
fig|6666666.65907.peg.1045 CDS gi|333351975|gb|AFIZ01000032.1| 58073 58474 2 + 402 hypothetical protein - none -
fig|6666666.65907.peg.1046 CDS gi|333351975|gb|AFIZ01000032.1| 59142 58630 -3 - 513 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1047 CDS gi|333351975|gb|AFIZ01000032.1| 68516 59139 -2 - 9378 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65907.peg.1048 CDS gi|333351975|gb|AFIZ01000032.1| 70126 68588 -1 - 1539 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65907.peg.1049 CDS gi|333351975|gb|AFIZ01000032.1| 72094 70127 -1 - 1968 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1050 CDS gi|333351975|gb|AFIZ01000032.1| 74152 72446 -1 - 1707 putative cholesterol oxidase - none -
fig|6666666.65907.peg.1051 CDS gi|333351975|gb|AFIZ01000032.1| 74806 74249 -1 - 558 hypothetical protein - none -
fig|6666666.65907.peg.1052 CDS gi|333351975|gb|AFIZ01000032.1| 75685 75041 -1 - 645 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65907.peg.1053 CDS gi|333351975|gb|AFIZ01000032.1| 76010 75696 -2 - 315 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65907.peg.1054 CDS gi|333351975|gb|AFIZ01000032.1| 78736 76058 -1 - 2679 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65907.peg.1055 CDS gi|333351975|gb|AFIZ01000032.1| 79396 78767 -1 - 630 hypothetical protein - none -
fig|6666666.65907.peg.1056 CDS gi|333351975|gb|AFIZ01000032.1| 80750 79413 -2 - 1338 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65907.peg.1057 CDS gi|333351975|gb|AFIZ01000032.1| 81667 82572 1 + 906 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.1058 CDS gi|333351975|gb|AFIZ01000032.1| 84661 82595 -1 - 2067 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.65907.peg.1059 CDS gi|333351975|gb|AFIZ01000032.1| 84686 84871 2 + 186 hypothetical protein - none -
fig|6666666.65907.peg.1060 CDS gi|333351975|gb|AFIZ01000032.1| 85214 84834 -2 - 381 hypothetical protein - none -
fig|6666666.65907.peg.1061 CDS gi|333351975|gb|AFIZ01000032.1| 85405 85217 -1 - 189 hypothetical protein - none -
fig|6666666.65907.peg.1062 CDS gi|333351975|gb|AFIZ01000032.1| 85682 86392 2 + 711 Predicted dinucleotide-binding enzymes - none -
fig|6666666.65907.peg.1063 CDS gi|333351975|gb|AFIZ01000032.1| 87967 86465 -1 - 1503 putative carboxylesterase - none -
fig|6666666.65907.peg.1064 CDS gi|333351975|gb|AFIZ01000032.1| 88654 88016 -1 - 639 Metal-dependent hydrolase - none -
fig|6666666.65907.peg.1065 CDS gi|333351975|gb|AFIZ01000032.1| 88812 89267 3 + 456 hypothetical protein - none -
fig|6666666.65907.peg.1066 CDS gi|333351975|gb|AFIZ01000032.1| 90064 89342 -1 - 723 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1067 CDS gi|333351975|gb|AFIZ01000032.1| 90861 90427 -3 - 435 hypothetical protein - none -
fig|6666666.65907.peg.1068 CDS gi|333351975|gb|AFIZ01000032.1| 91109 92320 2 + 1212 Na+/H+ antiporter - none -
fig|6666666.65907.peg.1069 CDS gi|333351975|gb|AFIZ01000032.1| 93151 92351 -1 - 801 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65907.peg.1070 CDS gi|333351975|gb|AFIZ01000032.1| 93999 93148 -3 - 852 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.65907.peg.1071 CDS gi|333351975|gb|AFIZ01000032.1| 95090 93996 -2 - 1095 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65907.peg.1072 CDS gi|333351975|gb|AFIZ01000032.1| 96149 95100 -2 - 1050 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.65907.peg.1073 CDS gi|333351975|gb|AFIZ01000032.1| 97078 96278 -1 - 801 Transcriptional regulator, AraC family - none -
fig|6666666.65907.peg.1074 CDS gi|333351975|gb|AFIZ01000032.1| 98356 97310 -1 - 1047 alkanal monooxygenase-like( EC:1.14.14.3 ) - none -
fig|6666666.65907.peg.1075 CDS gi|333351975|gb|AFIZ01000032.1| 98477 99499 2 + 1023 hypothetical protein - none -
fig|6666666.65907.peg.1076 CDS gi|333351975|gb|AFIZ01000032.1| 100317 99508 -3 - 810 Oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.65907.peg.1077 CDS gi|333351975|gb|AFIZ01000032.1| 102857 100317 -2 - 2541 monooxygenase, flavin-binding family - none -
fig|6666666.65907.peg.1078 CDS gi|333351975|gb|AFIZ01000032.1| 102904 103797 1 + 894 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.1079 CDS gi|333351975|gb|AFIZ01000032.1| 103833 104432 3 + 600 hypothetical protein - none -
fig|6666666.65907.peg.1080 CDS gi|333351975|gb|AFIZ01000032.1| 105418 104462 -1 - 957 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65907.peg.1081 CDS gi|333351975|gb|AFIZ01000032.1| 105523 106203 1 + 681 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65907.peg.1082 CDS gi|333351975|gb|AFIZ01000032.1| 106200 107969 3 + 1770 ABC1 family protein - none -
fig|6666666.65907.peg.1083 CDS gi|333351975|gb|AFIZ01000032.1| 108486 108049 -3 - 438 hypothetical protein - none -
fig|6666666.65907.peg.1084 CDS gi|333351975|gb|AFIZ01000032.1| 109502 108492 -2 - 1011 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.65907.peg.1085 CDS gi|333351975|gb|AFIZ01000032.1| 110030 109734 -2 - 297 hypothetical protein - none -
fig|6666666.65907.peg.1086 CDS gi|333351975|gb|AFIZ01000032.1| 110138 111541 2 + 1404 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65907.peg.1087 CDS gi|333351975|gb|AFIZ01000032.1| 114047 111567 -2 - 2481 putative membrane protein - none -
fig|6666666.65907.peg.1088 CDS gi|333351975|gb|AFIZ01000032.1| 116124 114094 -3 - 2031 FIG00544723: hypothetical protein - none -
fig|6666666.65907.peg.1089 CDS gi|333351975|gb|AFIZ01000032.1| 117116 116931 -2 - 186 hypothetical protein - none -
fig|6666666.65907.peg.1090 CDS gi|333351975|gb|AFIZ01000032.1| 117768 117238 -3 - 531 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.65907.peg.1091 CDS gi|333351975|gb|AFIZ01000032.1| 118301 117774 -2 - 528 hypothetical protein - none -
fig|6666666.65907.peg.1092 CDS gi|333351975|gb|AFIZ01000032.1| 118349 119377 2 + 1029 Arogenate dehydrogenase (EC 1.3.1.43) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65907.peg.1093 CDS gi|333351975|gb|AFIZ01000032.1| 120436 119399 -1 - 1038 hypothetical protein - none -
fig|6666666.65907.peg.1094 CDS gi|333351975|gb|AFIZ01000032.1| 121328 120465 -2 - 864 hypothetical protein - none -
fig|6666666.65907.peg.1095 CDS gi|333351975|gb|AFIZ01000032.1| 122271 121399 -3 - 873 hypothetical protein - none -
fig|6666666.65907.peg.1096 CDS gi|333351975|gb|AFIZ01000032.1| 123179 122613 -2 - 567 hypothetical protein - none -
fig|6666666.65907.peg.1097 CDS gi|333351975|gb|AFIZ01000032.1| 123380 124591 2 + 1212 Putative two-component system sensor kinase - none -
fig|6666666.65907.peg.1098 CDS gi|333351975|gb|AFIZ01000032.1| 124644 125336 3 + 693 DNA-binding response regulator, LuxR family - none -
fig|6666666.65907.peg.1099 CDS gi|333351975|gb|AFIZ01000032.1| 126264 125383 -3 - 882 hypothetical protein - none -
fig|6666666.65907.peg.1100 CDS gi|333351975|gb|AFIZ01000032.1| 127743 126325 -3 - 1419 non-ribosomal peptide synthetase modules and related proteins - none -
fig|6666666.65907.peg.1101 CDS gi|333351975|gb|AFIZ01000032.1| 127842 128666 3 + 825 alpha/beta hydrolase fold - none -
fig|6666666.65907.peg.1102 CDS gi|333351975|gb|AFIZ01000032.1| 129782 128988 -2 - 795 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) - none -
fig|6666666.65907.peg.1103 CDS gi|333351975|gb|AFIZ01000032.1| 130323 131405 3 + 1083 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65907.peg.1104 CDS gi|333351975|gb|AFIZ01000032.1| 131440 132051 1 + 612 hypothetical protein - none -
fig|6666666.65907.peg.1105 CDS gi|333351975|gb|AFIZ01000032.1| 132785 132081 -2 - 705 hypothetical protein - none -
fig|6666666.65907.peg.1106 CDS gi|333351975|gb|AFIZ01000032.1| 134188 132809 -1 - 1380 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65907.peg.1107 CDS gi|333351975|gb|AFIZ01000032.1| 135763 134243 -1 - 1521 FAD/FMN-containing dehydrogenases - none -
fig|6666666.65907.peg.1108 CDS gi|333351975|gb|AFIZ01000032.1| 135795 138302 3 + 2508 ATP-dependent helicase HrpB - none -
fig|6666666.65907.peg.1109 CDS gi|333351975|gb|AFIZ01000032.1| 138721 138993 1 + 273 hypothetical protein - none -
fig|6666666.65907.peg.1110 CDS gi|333351975|gb|AFIZ01000032.1| 139314 139021 -3 - 294 hypothetical protein - none -
fig|6666666.65907.peg.1111 CDS gi|333351975|gb|AFIZ01000032.1| 139787 139389 -2 - 399 FIG00544629: hypothetical protein - none -
fig|6666666.65907.peg.1112 CDS gi|333351975|gb|AFIZ01000032.1| 140497 139832 -1 - 666 hypothetical protein - none -
fig|6666666.65907.peg.1113 CDS gi|333351975|gb|AFIZ01000032.1| 141644 140661 -2 - 984 2-nitropropane dioxygenase, NPD - none -
fig|6666666.65907.peg.1114 CDS gi|333351975|gb|AFIZ01000032.1| 141711 142043 3 + 333 Conserved putative integral membrane protein - none -
fig|6666666.65907.peg.1115 CDS gi|333351975|gb|AFIZ01000032.1| 142625 142074 -2 - 552 Multimeric flavodoxin WrbA - none -
fig|6666666.65907.peg.1116 CDS gi|333351975|gb|AFIZ01000032.1| 142762 143469 1 + 708 Glutamine amidotransferase class-I (EC 6.3.5.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.1117 CDS gi|333351975|gb|AFIZ01000032.1| 143471 144058 2 + 588 carbonic anhydrase, family 3 - none -
fig|6666666.65907.peg.1118 CDS gi|333351975|gb|AFIZ01000032.1| 144809 144051 -2 - 759 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65907.peg.1119 CDS gi|333351975|gb|AFIZ01000032.1| 146521 144824 -1 - 1698 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN - none -
fig|6666666.65907.peg.1120 CDS gi|333351975|gb|AFIZ01000032.1| 146994 147512 3 + 519 hypothetical protein - none -
fig|6666666.65907.peg.1121 CDS gi|333351975|gb|AFIZ01000032.1| 149259 147745 -3 - 1515 hypothetical protein - none -
fig|6666666.65907.peg.1122 CDS gi|333351975|gb|AFIZ01000032.1| 150423 149398 -3 - 1026 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65907.peg.1123 CDS gi|333351975|gb|AFIZ01000032.1| 151070 150420 -2 - 651 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65907.peg.1124 CDS gi|333351975|gb|AFIZ01000032.1| 151813 151082 -1 - 732 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65907.peg.1125 CDS gi|333351975|gb|AFIZ01000032.1| 153558 151822 -3 - 1737 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65907.peg.1126 CDS gi|333351975|gb|AFIZ01000032.1| 153932 153555 -2 - 378 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65907.peg.1127 CDS gi|333351975|gb|AFIZ01000032.1| 154737 153964 -3 - 774 hypothetical protein - none -
fig|6666666.65907.peg.1128 CDS gi|333351975|gb|AFIZ01000032.1| 155042 154734 -2 - 309 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65907.peg.1129 CDS gi|333351975|gb|AFIZ01000032.1| 155201 155995 2 + 795 hypothetical protein - none -
fig|6666666.65907.peg.1130 CDS gi|333351975|gb|AFIZ01000032.1| 158037 156457 -3 - 1581 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.65907.peg.1131 CDS gi|333351975|gb|AFIZ01000032.1| 158492 158145 -2 - 348 putative mercury resistance operon regulator MerR - none -
fig|6666666.65907.peg.1132 CDS gi|333351975|gb|AFIZ01000032.1| 159529 158504 -1 - 1026 Luciferase-like monooxygenase (EC 1.14.-.-) - none -
fig|6666666.65907.peg.1133 CDS gi|333351975|gb|AFIZ01000032.1| 160367 159582 -2 - 786 hypothetical protein - none -
fig|6666666.65907.peg.1134 CDS gi|333351975|gb|AFIZ01000032.1| 160767 161930 3 + 1164 ABC transporter (iron.B12.siderophore.hemin) , permease component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65907.peg.1135 CDS gi|333351975|gb|AFIZ01000032.1| 161927 162886 2 + 960 ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65907.peg.1136 CDS gi|333351975|gb|AFIZ01000032.1| 162883 163626 1 + 744 ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65907.peg.1137 CDS gi|333351975|gb|AFIZ01000032.1| 163870 163655 -1 - 216 hypothetical protein - none -
fig|6666666.65907.peg.1138 CDS gi|333351975|gb|AFIZ01000032.1| 164220 163870 -3 - 351 hypothetical protein - none -
fig|6666666.65907.peg.1139 CDS gi|333351975|gb|AFIZ01000032.1| 165048 164431 -3 - 618 protein kinase( EC:2.7.11.1 ) - none -
fig|6666666.65907.peg.1140 CDS gi|333351975|gb|AFIZ01000032.1| 165145 165762 1 + 618 hypothetical protein - none -
fig|6666666.65907.peg.1141 CDS gi|333351975|gb|AFIZ01000032.1| 167352 165781 -3 - 1572 putative ABC transporter permease protein - none -
fig|6666666.65907.peg.1142 CDS gi|333351975|gb|AFIZ01000032.1| 167617 169071 1 + 1455 putative membrane protein - none -
fig|6666666.65907.peg.1143 CDS gi|333351975|gb|AFIZ01000032.1| 170401 169160 -1 - 1242 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.65907.peg.1144 CDS gi|333351975|gb|AFIZ01000032.1| 171130 170495 -1 - 636 hypothetical protein - none -
fig|6666666.65907.peg.1145 CDS gi|333351975|gb|AFIZ01000032.1| 172053 171127 -3 - 927 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.65907.peg.1146 CDS gi|333351975|gb|AFIZ01000032.1| 172969 172409 -1 - 561 Succinyl-CoA synthetase, alpha subunit - none -
fig|6666666.65907.peg.1147 CDS gi|333351975|gb|AFIZ01000032.1| 174219 173092 -3 - 1128 NADH-FMN oxidoreductase - none -
fig|6666666.65907.peg.1148 CDS gi|333351975|gb|AFIZ01000032.1| 175151 174429 -2 - 723 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1149 CDS gi|333351975|gb|AFIZ01000032.1| 176362 175196 -1 - 1167 Pigment protein - none -
fig|6666666.65907.peg.1150 CDS gi|333351975|gb|AFIZ01000032.1| 176678 178018 2 + 1341 putative amidase - none -
fig|6666666.65907.peg.1151 CDS gi|333351975|gb|AFIZ01000032.1| 178066 178308 1 + 243 hypothetical protein - none -
fig|6666666.65907.peg.1152 CDS gi|333351975|gb|AFIZ01000032.1| 178368 178970 3 + 603 Nitrogen regulation protein NR(I) Ammonia assimilation
fig|6666666.65907.peg.1153 CDS gi|333351975|gb|AFIZ01000032.1| 179999 179049 -2 - 951 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) Anaerobic respiratory reductases;
Anaerobic respiratory reductases
fig|6666666.65907.peg.1154 CDS gi|333351975|gb|AFIZ01000032.1| 180876 180103 -3 - 774 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1155 CDS gi|333351975|gb|AFIZ01000032.1| 181400 180915 -2 - 486 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-) Aromatic dioxygenase mess;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65907.peg.1156 CDS gi|333351975|gb|AFIZ01000032.1| 182736 181450 -3 - 1287 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) Aromatic dioxygenase mess;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65907.peg.1157 CDS gi|333351975|gb|AFIZ01000032.1| 183160 182780 -1 - 381 FIG01001988: hypothetical protein - none -
fig|6666666.65907.peg.1158 CDS gi|333351975|gb|AFIZ01000032.1| 184378 183206 -1 - 1173 Pigment protein - none -
fig|6666666.65907.peg.1159 CDS gi|333351975|gb|AFIZ01000032.1| 184780 186093 1 + 1314 Two-component oxygen-sensor histidine kinase FixL - none -
fig|6666666.65907.peg.1160 CDS gi|333351975|gb|AFIZ01000032.1| 186637 186062 -1 - 576 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1161 CDS gi|333351975|gb|AFIZ01000032.1| 188126 186624 -2 - 1503 FIG00544776: hypothetical protein - none -
fig|6666666.65907.peg.1162 CDS gi|333351975|gb|AFIZ01000032.1| 188365 189723 1 + 1359 hypothetical protein - none -
fig|6666666.65907.peg.1163 CDS gi|333351975|gb|AFIZ01000032.1| 189743 191323 2 + 1581 Allantoinase (EC 3.5.2.5) Allantoin Utilization
fig|6666666.65907.peg.1164 CDS gi|333351975|gb|AFIZ01000032.1| 191334 192383 3 + 1050 Allantoicase (EC 3.5.3.4) Allantoin Utilization
fig|6666666.65907.peg.1165 CDS gi|333351975|gb|AFIZ01000032.1| 192432 194009 3 + 1578 hypothetical protein - none -
fig|6666666.65907.peg.1166 CDS gi|333351975|gb|AFIZ01000032.1| 194157 194420 3 + 264 hypothetical protein - none -
fig|6666666.65907.peg.1167 CDS gi|333351975|gb|AFIZ01000032.1| 194417 194656 2 + 240 hypothetical protein - none -
fig|6666666.65907.peg.1168 CDS gi|333351975|gb|AFIZ01000032.1| 195596 194832 -2 - 765 Aquaporin Z Osmoregulation
fig|6666666.65907.peg.1169 CDS gi|333351975|gb|AFIZ01000032.1| 195863 196924 2 + 1062 Oxidoreductase - none -
fig|6666666.65907.peg.1170 CDS gi|333351975|gb|AFIZ01000032.1| 197102 198568 2 + 1467 Xanthine-uracil permease - none -
fig|6666666.65907.peg.1171 CDS gi|333351975|gb|AFIZ01000032.1| 200040 198793 -3 - 1248 hypothetical protein - none -
fig|6666666.65907.peg.1172 CDS gi|333351976|gb|AFIZ01000031.1| 1941 814 -3 - 1128 Flp pilus assembly protein, ATPase CpaF - none -
fig|6666666.65907.peg.1173 CDS gi|333351976|gb|AFIZ01000031.1| 3161 1938 -2 - 1224 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.65907.peg.1174 CDS gi|333351976|gb|AFIZ01000031.1| 3539 4402 2 + 864 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65907.peg.1175 CDS gi|333351976|gb|AFIZ01000031.1| 4562 5077 2 + 516 hypothetical protein - none -
fig|6666666.65907.peg.1176 CDS gi|333351976|gb|AFIZ01000031.1| 5091 5999 3 + 909 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.65907.peg.1177 CDS gi|333351977|gb|AFIZ01000030.1| 2087 1017 -2 - 1071 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65907.peg.1178 CDS gi|333351977|gb|AFIZ01000030.1| 2104 3057 1 + 954 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65907.peg.1179 CDS gi|333351977|gb|AFIZ01000030.1| 3209 3340 2 + 132 hypothetical protein - none -
fig|6666666.65907.peg.1180 CDS gi|333351977|gb|AFIZ01000030.1| 3418 4797 1 + 1380 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.65907.peg.1181 CDS gi|333351977|gb|AFIZ01000030.1| 4799 5083 2 + 285 hypothetical protein - none -
fig|6666666.65907.peg.1182 CDS gi|333351977|gb|AFIZ01000030.1| 5255 5383 2 + 129 hypothetical protein - none -
fig|6666666.65907.peg.1183 CDS gi|333351977|gb|AFIZ01000030.1| 5398 5721 1 + 324 hypothetical protein - none -
fig|6666666.65907.peg.1184 CDS gi|333351977|gb|AFIZ01000030.1| 5805 7058 3 + 1254 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65907.peg.1185 CDS gi|333351977|gb|AFIZ01000030.1| 7069 8022 1 + 954 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65907.peg.1186 CDS gi|333351977|gb|AFIZ01000030.1| 8794 8492 -1 - 303 hypothetical protein - none -
fig|6666666.65907.peg.1187 CDS gi|333351977|gb|AFIZ01000030.1| 9086 9601 2 + 516 hypothetical protein - none -
fig|6666666.65907.peg.1188 CDS gi|333351977|gb|AFIZ01000030.1| 10592 9717 -2 - 876 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65907.peg.1189 CDS gi|333351977|gb|AFIZ01000030.1| 11275 10592 -1 - 684 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65907.peg.1190 CDS gi|333351977|gb|AFIZ01000030.1| 11372 12496 2 + 1125 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.65907.peg.1191 CDS gi|333351977|gb|AFIZ01000030.1| 12511 13776 1 + 1266 POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) - none -
fig|6666666.65907.peg.1192 CDS gi|333351977|gb|AFIZ01000030.1| 14278 13805 -1 - 474 hypothetical protein - none -
fig|6666666.65907.peg.1193 CDS gi|333351977|gb|AFIZ01000030.1| 14893 14513 -1 - 381 hypothetical protein - none -
fig|6666666.65907.peg.1194 CDS gi|333351977|gb|AFIZ01000030.1| 16355 15264 -2 - 1092 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65907.peg.1195 CDS gi|333351977|gb|AFIZ01000030.1| 17437 16355 -1 - 1083 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65907.peg.1196 CDS gi|333351977|gb|AFIZ01000030.1| 19352 17547 -2 - 1806 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65907.peg.1197 CDS gi|333351977|gb|AFIZ01000030.1| 20237 19449 -2 - 789 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65907.peg.1198 CDS gi|333351977|gb|AFIZ01000030.1| 20854 20240 -1 - 615 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65907.peg.1199 CDS gi|333351977|gb|AFIZ01000030.1| 21521 20856 -2 - 666 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.65907.peg.1200 CDS gi|333351977|gb|AFIZ01000030.1| 23034 21964 -3 - 1071 putative ABC transporter, periplasmic iron-siderophore binding protein - none -
fig|6666666.65907.peg.1201 CDS gi|333351977|gb|AFIZ01000030.1| 24431 23109 -2 - 1323 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.1202 CDS gi|333351977|gb|AFIZ01000030.1| 27305 24462 -2 - 2844 FUPA26 P-type ATPase - none -
fig|6666666.65907.peg.1203 CDS gi|333351977|gb|AFIZ01000030.1| 27790 27302 -1 - 489 hypothetical membrane protein - none -
fig|6666666.65907.peg.1204 CDS gi|333351977|gb|AFIZ01000030.1| 28465 27794 -1 - 672 hypothetical protein - none -
fig|6666666.65907.peg.1205 CDS gi|333351977|gb|AFIZ01000030.1| 29542 28520 -1 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.1206 CDS gi|333351977|gb|AFIZ01000030.1| 31607 29565 -2 - 2043 Membrane protein - none -
fig|6666666.65907.peg.1207 CDS gi|333351977|gb|AFIZ01000030.1| 32397 31612 -3 - 786 ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.1208 CDS gi|333351977|gb|AFIZ01000030.1| 32380 32922 1 + 543 hypothetical protein - none -
fig|6666666.65907.peg.1209 CDS gi|333351977|gb|AFIZ01000030.1| 34892 33060 -2 - 1833 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.1210 CDS gi|333351977|gb|AFIZ01000030.1| 35949 34990 -3 - 960 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.1211 CDS gi|333351977|gb|AFIZ01000030.1| 37352 35949 -2 - 1404 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.1212 CDS gi|333351977|gb|AFIZ01000030.1| 37772 37509 -2 - 264 Glutaredoxin-like domain protein - none -
fig|6666666.65907.peg.1213 CDS gi|333351977|gb|AFIZ01000030.1| 38452 38234 -1 - 219 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65907.peg.1214 CDS gi|333351977|gb|AFIZ01000030.1| 39539 38673 -2 - 867 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65907.peg.1215 CDS gi|333351977|gb|AFIZ01000030.1| 40947 39826 -3 - 1122 hypothetical protein - none -
fig|6666666.65907.peg.1216 CDS gi|333351977|gb|AFIZ01000030.1| 41946 41101 -3 - 846 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65907.peg.1217 CDS gi|333351977|gb|AFIZ01000030.1| 42084 43043 3 + 960 FIG00543972: hypothetical protein - none -
fig|6666666.65907.peg.1218 CDS gi|333351977|gb|AFIZ01000030.1| 44338 43142 -1 - 1197 hypothetical protein - none -
fig|6666666.65907.peg.1219 CDS gi|333351977|gb|AFIZ01000030.1| 45285 44548 -3 - 738 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65907.peg.1220 CDS gi|333351977|gb|AFIZ01000030.1| 46643 45297 -2 - 1347 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65907.peg.1221 CDS gi|333351977|gb|AFIZ01000030.1| 47422 46658 -1 - 765 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65907.peg.1222 CDS gi|333351977|gb|AFIZ01000030.1| 48065 47526 -2 - 540 Uncharacterized protein Rv0487/MT0505 clustered with mycothiol biosynthesis gene Glutathione analogs: mycothiol
fig|6666666.65907.peg.1223 CDS gi|333351977|gb|AFIZ01000030.1| 49422 48088 -3 - 1335 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65907.peg.1224 CDS gi|333351977|gb|AFIZ01000030.1| 50630 49491 -2 - 1140 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65907.peg.1225 CDS gi|333351977|gb|AFIZ01000030.1| 50675 51178 2 + 504 hypothetical protein - none -
fig|6666666.65907.peg.1226 CDS gi|333351977|gb|AFIZ01000030.1| 51381 52298 3 + 918 hypothetical protein - none -
fig|6666666.65907.peg.1227 CDS gi|333351977|gb|AFIZ01000030.1| 53255 52533 -2 - 723 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65907.peg.1228 CDS gi|333351977|gb|AFIZ01000030.1| 53554 53252 -1 - 303 hypothetical protein - none -
fig|6666666.65907.peg.1229 CDS gi|333351977|gb|AFIZ01000030.1| 54917 53580 -2 - 1338 FIG00544632: hypothetical protein - none -
fig|6666666.65907.peg.1230 CDS gi|333351977|gb|AFIZ01000030.1| 55406 55092 -2 - 315 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.65907.peg.1231 CDS gi|333351977|gb|AFIZ01000030.1| 56305 55553 -1 - 753 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65907.peg.1232 CDS gi|333351977|gb|AFIZ01000030.1| 58338 56305 -3 - 2034 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65907.peg.1233 CDS gi|333351977|gb|AFIZ01000030.1| 59108 58368 -2 - 741 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65907.peg.1234 CDS gi|333351977|gb|AFIZ01000030.1| 62028 59284 -3 - 2745 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Trehalose Biosynthesis;
Trehalose Uptake and Utilization
fig|6666666.65907.peg.1235 CDS gi|333351977|gb|AFIZ01000030.1| 62930 62154 -2 - 777 Beta-phosphoglucomutase (EC 5.4.2.6) Trehalose Uptake and Utilization
fig|6666666.65907.peg.1236 CDS gi|333351977|gb|AFIZ01000030.1| 65335 63131 -1 - 2205 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.65907.peg.1237 CDS gi|333351977|gb|AFIZ01000030.1| 65495 65770 2 + 276 hypothetical protein - none -
fig|6666666.65907.peg.1238 CDS gi|333351977|gb|AFIZ01000030.1| 65779 67071 1 + 1293 Isocitrate lyase (EC 4.1.3.1) Glyoxylate bypass;
Glyoxylate bypass cluster;
Serine-glyoxylate cycle
fig|6666666.65907.peg.1239 CDS gi|333351977|gb|AFIZ01000030.1| 68741 67500 -2 - 1242 FIG00545174: hypothetical protein - none -
fig|6666666.65907.peg.1240 CDS gi|333351977|gb|AFIZ01000030.1| 70134 68803 -3 - 1332 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65907.peg.1241 CDS gi|333351977|gb|AFIZ01000030.1| 70216 70356 1 + 141 hypothetical protein - none -
fig|6666666.65907.peg.1242 CDS gi|333351977|gb|AFIZ01000030.1| 70593 71903 3 + 1311 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.1243 CDS gi|333351977|gb|AFIZ01000030.1| 74435 73122 -2 - 1314 FIG00547211: hypothetical protein - none -
fig|6666666.65907.peg.1244 CDS gi|333351977|gb|AFIZ01000030.1| 74515 76689 1 + 2175 Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) - none -
fig|6666666.65907.peg.1245 CDS gi|333351977|gb|AFIZ01000030.1| 76701 77108 3 + 408 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.1246 CDS gi|333351977|gb|AFIZ01000030.1| 77741 77148 -2 - 594 hypothetical protein - none -
fig|6666666.65907.peg.1247 CDS gi|333351977|gb|AFIZ01000030.1| 78555 77788 -3 - 768 putative integral membrane protein - none -
fig|6666666.65907.peg.1248 CDS gi|333351977|gb|AFIZ01000030.1| 80608 79214 -1 - 1395 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65907.peg.1249 CDS gi|333351977|gb|AFIZ01000030.1| 80670 82199 3 + 1530 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65907.peg.1250 CDS gi|333351977|gb|AFIZ01000030.1| 83587 82202 -1 - 1386 Manganese transport protein MntH - none -
fig|6666666.65907.peg.1251 CDS gi|333351977|gb|AFIZ01000030.1| 86887 83867 -1 - 3021 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65907.peg.1252 CDS gi|333351977|gb|AFIZ01000030.1| 87661 87020 -1 - 642 Rrf2-linked NADH-flavin reductase - none -
fig|6666666.65907.peg.1253 CDS gi|333351977|gb|AFIZ01000030.1| 87766 88209 1 + 444 Transcriptional regulator, HxlR family - none -
fig|6666666.65907.peg.1254 CDS gi|333351977|gb|AFIZ01000030.1| 88561 88358 -1 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65907.peg.1255 CDS gi|333351977|gb|AFIZ01000030.1| 88821 91166 3 + 2346 FIG00545284: hypothetical protein - none -
fig|6666666.65907.peg.1256 CDS gi|333351977|gb|AFIZ01000030.1| 91615 91235 -1 - 381 hypothetical protein - none -
fig|6666666.65907.peg.1257 CDS gi|333351977|gb|AFIZ01000030.1| 92013 91612 -3 - 402 hypothetical protein - none -
fig|6666666.65907.peg.1258 CDS gi|333351977|gb|AFIZ01000030.1| 92431 92024 -1 - 408 FIG01255695: hypothetical protein - none -
fig|6666666.65907.peg.1259 CDS gi|333351978|gb|AFIZ01000029.1| 1071 502 -3 - 570 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65907.peg.1260 CDS gi|333351978|gb|AFIZ01000029.1| 1385 1071 -2 - 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65907.peg.1261 CDS gi|333351978|gb|AFIZ01000029.1| 1763 1389 -2 - 375 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65907.peg.1262 CDS gi|333351978|gb|AFIZ01000029.1| 2088 2489 3 + 402 hypothetical protein - none -
fig|6666666.65907.peg.1263 CDS gi|333351978|gb|AFIZ01000029.1| 2865 3233 3 + 369 hypothetical protein - none -
fig|6666666.65907.peg.1264 CDS gi|333351978|gb|AFIZ01000029.1| 3398 4558 2 + 1161 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65907.peg.1265 CDS gi|333351978|gb|AFIZ01000029.1| 4555 5667 1 + 1113 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.65907.peg.1266 CDS gi|333351978|gb|AFIZ01000029.1| 5664 6485 3 + 822 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65907.peg.1267 CDS gi|333351978|gb|AFIZ01000029.1| 6482 7387 2 + 906 Siderophore-interacting protein - none -
fig|6666666.65907.peg.1268 CDS gi|333351978|gb|AFIZ01000029.1| 8775 7576 -3 - 1200 Lipase 1 (EC 3.1.1.3) - none -
fig|6666666.65907.peg.1269 CDS gi|333351978|gb|AFIZ01000029.1| 8752 8958 1 + 207 hypothetical protein - none -
fig|6666666.65907.peg.1270 CDS gi|333351978|gb|AFIZ01000029.1| 10234 9011 -1 - 1224 Alkanesulfonate monooxygenase (EC 1.14.14.5) Alkanesulfonates Utilization
fig|6666666.65907.peg.1271 CDS gi|333351978|gb|AFIZ01000029.1| 11530 10271 -1 - 1260 putative integral membrane transporter - none -
fig|6666666.65907.peg.1272 CDS gi|333351978|gb|AFIZ01000029.1| 12716 11544 -2 - 1173 hypothetical protein - none -
fig|6666666.65907.peg.1273 CDS gi|333351978|gb|AFIZ01000029.1| 14266 13079 -1 - 1188 putative integral membrane protein - none -
fig|6666666.65907.peg.1274 CDS gi|333351978|gb|AFIZ01000029.1| 14444 15814 2 + 1371 possible monooxygenase - none -
fig|6666666.65907.peg.1275 CDS gi|333351978|gb|AFIZ01000029.1| 15811 17205 1 + 1395 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - none -
fig|6666666.65907.peg.1276 CDS gi|333351978|gb|AFIZ01000029.1| 17205 18389 3 + 1185 putative acyl-CoA dehydrogenase - none -
fig|6666666.65907.peg.1277 CDS gi|333351978|gb|AFIZ01000029.1| 19442 18501 -2 - 942 hypothetical protein - none -
fig|6666666.65907.peg.1278 CDS gi|333351978|gb|AFIZ01000029.1| 19706 20287 2 + 582 NADH-FMN oxidoreductase - none -
fig|6666666.65907.peg.1279 CDS gi|333351978|gb|AFIZ01000029.1| 20288 21364 2 + 1077 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; sulfonate monooxygenase - none -
fig|6666666.65907.peg.1280 CDS gi|333351978|gb|AFIZ01000029.1| 21361 22464 1 + 1104 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme - none -
fig|6666666.65907.peg.1281 CDS gi|333351978|gb|AFIZ01000029.1| 22570 24096 1 + 1527 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.1282 CDS gi|333351978|gb|AFIZ01000029.1| 24744 24478 -3 - 267 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.65907.peg.1283 CDS gi|333351978|gb|AFIZ01000029.1| 24989 24756 -2 - 234 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65907.peg.1284 CDS gi|333351978|gb|AFIZ01000029.1| 25405 24989 -1 - 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65907.peg.1285 CDS gi|333351978|gb|AFIZ01000029.1| 26155 25409 -1 - 747 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.65907.peg.1286 CDS gi|333351978|gb|AFIZ01000029.1| 26460 26155 -3 - 306 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65907.peg.1287 CDS gi|333351978|gb|AFIZ01000029.1| 26810 26532 -2 - 279 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.65907.peg.1288 CDS gi|333351978|gb|AFIZ01000029.1| 27617 26826 -2 - 792 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65907.peg.1289 CDS gi|333351978|gb|AFIZ01000029.1| 28007 27705 -2 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65907.peg.1290 CDS gi|333351978|gb|AFIZ01000029.1| 28657 28004 -1 - 654 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65907.peg.1291 CDS gi|333351978|gb|AFIZ01000029.1| 29310 28654 -3 - 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65907.peg.1292 CDS gi|333351978|gb|AFIZ01000029.1| 29678 29373 -2 - 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.65907.peg.1293 CDS gi|333351978|gb|AFIZ01000029.1| 30307 30858 1 + 552 Alkaline shock protein 23 - none -
fig|6666666.65907.peg.1294 CDS gi|333351978|gb|AFIZ01000029.1| 30886 31290 1 + 405 hypothetical protein - none -
fig|6666666.65907.peg.1295 CDS gi|333351978|gb|AFIZ01000029.1| 31299 31487 3 + 189 hypothetical protein - none -
fig|6666666.65907.peg.1296 CDS gi|333351978|gb|AFIZ01000029.1| 31496 32605 2 + 1110 hypothetical protein - none -
fig|6666666.65907.peg.1297 CDS gi|333351978|gb|AFIZ01000029.1| 32602 33264 1 + 663 hypothetical protein - none -
fig|6666666.65907.peg.1298 CDS gi|333351978|gb|AFIZ01000029.1| 33261 33824 3 + 564 hypothetical protein - none -
fig|6666666.65907.peg.1299 CDS gi|333351978|gb|AFIZ01000029.1| 35402 34212 -2 - 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65907.peg.1300 CDS gi|333351978|gb|AFIZ01000029.1| 35367 35633 3 + 267 hypothetical protein - none -
fig|6666666.65907.peg.1301 CDS gi|333351978|gb|AFIZ01000029.1| 37868 35742 -2 - 2127 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65907.peg.1302 CDS gi|333351978|gb|AFIZ01000029.1| 38362 37892 -1 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65907.peg.1303 CDS gi|333351978|gb|AFIZ01000029.1| 38737 38366 -1 - 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65907.peg.1304 CDS gi|333351978|gb|AFIZ01000029.1| 39296 38964 -2 - 333 hypothetical protein - none -
fig|6666666.65907.peg.1305 CDS gi|333351978|gb|AFIZ01000029.1| 43392 39424 -3 - 3969 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65907.peg.1306 CDS gi|333351978|gb|AFIZ01000029.1| 46992 43483 -3 - 3510 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65907.peg.1307 CDS gi|333351978|gb|AFIZ01000029.1| 48500 47322 -2 - 1179 hypothetical protein - none -
fig|6666666.65907.peg.1308 CDS gi|333351978|gb|AFIZ01000029.1| 49016 48636 -2 - 381 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65907.peg.1309 CDS gi|333351978|gb|AFIZ01000029.1| 49580 49062 -2 - 519 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65907.peg.1310 CDS gi|333351978|gb|AFIZ01000029.1| 49599 49934 3 + 336 hypothetical protein - none -
fig|6666666.65907.peg.1311 CDS gi|333351978|gb|AFIZ01000029.1| 49940 50893 2 + 954 putative secreted lipase - none -
fig|6666666.65907.peg.1312 CDS gi|333351978|gb|AFIZ01000029.1| 51730 51026 -1 - 705 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65907.peg.1313 CDS gi|333351978|gb|AFIZ01000029.1| 52315 51875 -1 - 441 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65907.peg.1314 CDS gi|333351978|gb|AFIZ01000029.1| 53313 52489 -3 - 825 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65907.peg.1315 CDS gi|333351978|gb|AFIZ01000029.1| 53746 53420 -1 - 327 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65907.peg.1316 CDS gi|333351978|gb|AFIZ01000029.1| 54135 54016 -3 - 120 hypothetical protein - none -
fig|6666666.65907.peg.1317 CDS gi|333351978|gb|AFIZ01000029.1| 56367 55420 -3 - 948 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.65907.peg.1318 CDS gi|333351978|gb|AFIZ01000029.1| 56534 57664 2 + 1131 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65907.peg.1319 CDS gi|333351978|gb|AFIZ01000029.1| 57667 57876 1 + 210 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65907.peg.1320 CDS gi|333351978|gb|AFIZ01000029.1| 58603 57911 -1 - 693 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65907.peg.1321 CDS gi|333351978|gb|AFIZ01000029.1| 59747 58605 -2 - 1143 Glycosyltransferase - none -
fig|6666666.65907.peg.1322 CDS gi|333351978|gb|AFIZ01000029.1| 60153 59770 -3 - 384 possible membrane protein - none -
fig|6666666.65907.peg.1323 CDS gi|333351978|gb|AFIZ01000029.1| 62313 60277 -3 - 2037 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65907.peg.1324 CDS gi|333351978|gb|AFIZ01000029.1| 62480 62352 -2 - 129 hypothetical protein - none -
fig|6666666.65907.peg.1325 CDS gi|333351978|gb|AFIZ01000029.1| 63426 62695 -3 - 732 hypothetical protein - none -
fig|6666666.65907.peg.1326 CDS gi|333351979|gb|AFIZ01000028.1| 139 2025 1 + 1887 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65907.peg.1327 CDS gi|333351979|gb|AFIZ01000028.1| 2953 2039 -1 - 915 hypothetical protein - none -
fig|6666666.65907.peg.1328 CDS gi|333351979|gb|AFIZ01000028.1| 3864 2929 -3 - 936 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.1329 CDS gi|333351979|gb|AFIZ01000028.1| 5171 3894 -2 - 1278 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65907.peg.1330 CDS gi|333351979|gb|AFIZ01000028.1| 5266 6288 1 + 1023 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.1331 CDS gi|333351979|gb|AFIZ01000028.1| 6831 6505 -3 - 327 hypothetical protein - none -
fig|6666666.65907.peg.1332 CDS gi|333351979|gb|AFIZ01000028.1| 7054 7401 1 + 348 hypothetical protein - none -
fig|6666666.65907.peg.1333 CDS gi|333351979|gb|AFIZ01000028.1| 9019 7466 -1 - 1554 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.1334 CDS gi|333351979|gb|AFIZ01000028.1| 10045 9107 -1 - 939 putative phosphoglycerate mutase - none -
fig|6666666.65907.peg.1335 CDS gi|333351979|gb|AFIZ01000028.1| 10983 10042 -3 - 942 Prephenate dehydratase (EC 4.2.1.51) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65907.peg.1336 CDS gi|333351979|gb|AFIZ01000028.1| 11023 12516 1 + 1494 putative amidase - none -
fig|6666666.65907.peg.1337 CDS gi|333351979|gb|AFIZ01000028.1| 12506 13354 2 + 849 Putative conserved integral membrane protein - none -
fig|6666666.65907.peg.1338 CDS gi|333351979|gb|AFIZ01000028.1| 14101 13559 -1 - 543 hypothetical protein - none -
fig|6666666.65907.peg.1339 CDS gi|333351979|gb|AFIZ01000028.1| 14625 14230 -3 - 396 hypothetical protein - none -
fig|6666666.65907.peg.1340 CDS gi|333351979|gb|AFIZ01000028.1| 14687 15988 2 + 1302 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65907.peg.1341 CDS gi|333351979|gb|AFIZ01000028.1| 16575 16081 -3 - 495 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.65907.peg.1342 CDS gi|333351979|gb|AFIZ01000028.1| 16640 16753 2 + 114 hypothetical protein - none -
fig|6666666.65907.peg.1343 CDS gi|333351979|gb|AFIZ01000028.1| 17921 16977 -2 - 945 FIG00996178: hypothetical protein - none -
fig|6666666.65907.peg.1344 CDS gi|333351979|gb|AFIZ01000028.1| 18684 17932 -3 - 753 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65907.peg.1345 CDS gi|333351979|gb|AFIZ01000028.1| 18728 19618 2 + 891 hypothetical protein - none -
fig|6666666.65907.peg.1346 CDS gi|333351979|gb|AFIZ01000028.1| 20639 19665 -2 - 975 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate
fig|6666666.65907.peg.1347 CDS gi|333351979|gb|AFIZ01000028.1| 20895 21500 3 + 606 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65907.peg.1348 CDS gi|333351979|gb|AFIZ01000028.1| 21790 22317 1 + 528 Cys-tRNA(Pro) deacylase YbaK - none -
fig|6666666.65907.peg.1349 CDS gi|333351979|gb|AFIZ01000028.1| 23074 22379 -1 - 696 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65907.peg.1350 CDS gi|333351979|gb|AFIZ01000028.1| 24875 23112 -2 - 1764 hypothetical protein - none -
fig|6666666.65907.peg.1351 CDS gi|333351979|gb|AFIZ01000028.1| 24968 25585 2 + 618 FIG071084: hypothetical protein - none -
fig|6666666.65907.peg.1352 CDS gi|333351979|gb|AFIZ01000028.1| 25758 26117 3 + 360 hypothetical protein - none -
fig|6666666.65907.peg.1353 CDS gi|333351979|gb|AFIZ01000028.1| 26866 26231 -1 - 636 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.1354 CDS gi|333351979|gb|AFIZ01000028.1| 28159 26918 -1 - 1242 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.1355 CDS gi|333351979|gb|AFIZ01000028.1| 28277 29587 2 + 1311 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster
fig|6666666.65907.peg.1356 CDS gi|333351979|gb|AFIZ01000028.1| 30271 29609 -1 - 663 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1357 CDS gi|333351979|gb|AFIZ01000028.1| 31353 30382 -3 - 972 Universal stress protein family - none -
fig|6666666.65907.peg.1358 CDS gi|333351979|gb|AFIZ01000028.1| 31701 31561 -3 - 141 hypothetical protein - none -
fig|6666666.65907.peg.1359 CDS gi|333351979|gb|AFIZ01000028.1| 31924 32799 1 + 876 Similar to ribosomal large subunit pseudouridine synthase D, type RluD4 RNA pseudouridine syntheses
fig|6666666.65907.peg.1360 CDS gi|333351980|gb|AFIZ01000027.1| 1438 2 -1 - 1437 FIG00545619: hypothetical protein - none -
fig|6666666.65907.peg.1361 CDS gi|333351980|gb|AFIZ01000027.1| 2233 1574 -1 - 660 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1362 CDS gi|333351980|gb|AFIZ01000027.1| 2323 3078 1 + 756 short chain dehydrogenase - none -
fig|6666666.65907.peg.1363 CDS gi|333351980|gb|AFIZ01000027.1| 3177 4802 3 + 1626 possible proteinase - none -
fig|6666666.65907.peg.1364 CDS gi|333351980|gb|AFIZ01000027.1| 5605 4799 -1 - 807 Inner membrane protein YihY, formerly thought to be RNase BN CBSS-342610.3.peg.283;
LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.65907.peg.1365 CDS gi|333351980|gb|AFIZ01000027.1| 6488 5772 -2 - 717 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.65907.peg.1366 CDS gi|333351980|gb|AFIZ01000027.1| 6477 6830 3 + 354 hypothetical protein - none -
fig|6666666.65907.peg.1367 CDS gi|333351980|gb|AFIZ01000027.1| 6840 7697 3 + 858 Aldo/keto reductase - none -
fig|6666666.65907.peg.1368 CDS gi|333351980|gb|AFIZ01000027.1| 8285 7704 -2 - 582 Maltose O-acetyltransferase (EC 2.3.1.79) - none -
fig|6666666.65907.peg.1369 CDS gi|333351980|gb|AFIZ01000027.1| 9190 8288 -1 - 903 putative DNA-binding protein - none -
fig|6666666.65907.peg.1370 CDS gi|333351980|gb|AFIZ01000027.1| 9519 9848 3 + 330 Mobile element protein - none -
fig|6666666.65907.peg.1371 CDS gi|333351980|gb|AFIZ01000027.1| 9848 10606 2 + 759 Mobile element protein - none -
fig|6666666.65907.peg.1372 CDS gi|333351980|gb|AFIZ01000027.1| 10603 10737 1 + 135 Mobile element protein - none -
fig|6666666.65907.peg.1373 CDS gi|333351980|gb|AFIZ01000027.1| 10815 11615 3 + 801 aldo/keto reductase - none -
fig|6666666.65907.peg.1374 CDS gi|333351980|gb|AFIZ01000027.1| 13879 12041 -1 - 1839 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65907.peg.1375 CDS gi|333351980|gb|AFIZ01000027.1| 14358 13924 -3 - 435 hypothetical protein - none -
fig|6666666.65907.peg.1376 CDS gi|333351980|gb|AFIZ01000027.1| 15440 14355 -2 - 1086 hypothetical protein - none -
fig|6666666.65907.peg.1377 CDS gi|333351980|gb|AFIZ01000027.1| 15552 16283 3 + 732 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.65907.peg.1378 CDS gi|333351980|gb|AFIZ01000027.1| 16293 18605 3 + 2313 putative integral membrane protein - none -
fig|6666666.65907.peg.1379 CDS gi|333351980|gb|AFIZ01000027.1| 18602 19840 2 + 1239 probable integral membrane protein - none -
fig|6666666.65907.peg.1380 CDS gi|333351980|gb|AFIZ01000027.1| 19897 20346 1 + 450 hypothetical protein - none -
fig|6666666.65907.peg.1381 CDS gi|333351980|gb|AFIZ01000027.1| 21511 20606 -1 - 906 putative transcription regulator - none -
fig|6666666.65907.peg.1382 CDS gi|333351980|gb|AFIZ01000027.1| 21576 22847 3 + 1272 putative transport protein - none -
fig|6666666.65907.peg.1383 CDS gi|333351980|gb|AFIZ01000027.1| 22994 23563 2 + 570 putative cholesterol esterase - none -
fig|6666666.65907.peg.1384 CDS gi|333351980|gb|AFIZ01000027.1| 23563 24963 1 + 1401 hypothetical protein - none -
fig|6666666.65907.peg.1385 CDS gi|333351980|gb|AFIZ01000027.1| 25678 25166 -1 - 513 hypothetical protein - none -
fig|6666666.65907.peg.1386 CDS gi|333351980|gb|AFIZ01000027.1| 26472 26588 3 + 117 hypothetical protein - none -
fig|6666666.65907.peg.1387 CDS gi|333351980|gb|AFIZ01000027.1| 27687 27571 -3 - 117 hypothetical protein - none -
fig|6666666.65907.peg.1388 CDS gi|333351980|gb|AFIZ01000027.1| 29153 29037 -2 - 117 hypothetical protein - none -
fig|6666666.65907.peg.1389 CDS gi|333351980|gb|AFIZ01000027.1| 29827 29702 -1 - 126 hypothetical protein - none -
fig|6666666.65907.peg.1390 CDS gi|333351980|gb|AFIZ01000027.1| 30278 31960 2 + 1683 hypothetical protein - none -
fig|6666666.65907.peg.1391 CDS gi|333351980|gb|AFIZ01000027.1| 32937 32077 -3 - 861 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.65907.peg.1392 CDS gi|333351980|gb|AFIZ01000027.1| 33722 33069 -2 - 654 CRISPR-associated protein, Cse3 family CRISPRs
fig|6666666.65907.peg.1393 CDS gi|333351980|gb|AFIZ01000027.1| 33925 33725 -1 - 201 hypothetical protein - none -
fig|6666666.65907.peg.1394 CDS gi|333351980|gb|AFIZ01000027.1| 35548 34439 -1 - 1110 CRISPR-associated protein, CT1975 family - none -
fig|6666666.65907.peg.1395 CDS gi|333351980|gb|AFIZ01000027.1| 35902 35558 -1 - 345 CRISPR-associated protein, Cse2 family CRISPRs
fig|6666666.65907.peg.1396 CDS gi|333351980|gb|AFIZ01000027.1| 37629 36199 -3 - 1431 CRISPR-associated protein, Cse1 family CRISPRs
fig|6666666.65907.peg.1397 CDS gi|333351980|gb|AFIZ01000027.1| 40840 38033 -1 - 2808 CRISPR-associated helicase Cas3, protein CRISPRs
fig|6666666.65907.peg.1398 CDS gi|333351980|gb|AFIZ01000027.1| 43313 41667 -2 - 1647 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65907.peg.1399 CDS gi|333351980|gb|AFIZ01000027.1| 48297 43315 -3 - 4983 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1400 CDS gi|333351980|gb|AFIZ01000027.1| 50340 48457 -3 - 1884 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.1401 CDS gi|333351980|gb|AFIZ01000027.1| 51378 50425 -3 - 954 hypothetical protein Rv3802c - none -
fig|6666666.65907.peg.1402 CDS gi|333351980|gb|AFIZ01000027.1| 53492 51453 -2 - 2040 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.1403 CDS gi|333351980|gb|AFIZ01000027.1| 54955 53849 -1 - 1107 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.1404 CDS gi|333351980|gb|AFIZ01000027.1| 55761 55246 -3 - 516 hypothetical protein - none -
fig|6666666.65907.peg.1405 CDS gi|333351980|gb|AFIZ01000027.1| 57716 55761 -2 - 1956 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.1406 CDS gi|333351980|gb|AFIZ01000027.1| 58638 57871 -3 - 768 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.65907.peg.1407 CDS gi|333351980|gb|AFIZ01000027.1| 59064 58669 -3 - 396 hypothetical protein - none -
fig|6666666.65907.peg.1408 CDS gi|333351980|gb|AFIZ01000027.1| 59465 59061 -2 - 405 hypothetical protein - none -
fig|6666666.65907.peg.1409 CDS gi|333351980|gb|AFIZ01000027.1| 60644 59595 -2 - 1050 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.1410 CDS gi|333351980|gb|AFIZ01000027.1| 60621 60770 3 + 150 hypothetical protein - none -
fig|6666666.65907.peg.1411 CDS gi|333351980|gb|AFIZ01000027.1| 61906 60860 -1 - 1047 putative membrane protein - none -
fig|6666666.65907.peg.1412 CDS gi|333351980|gb|AFIZ01000027.1| 62442 61903 -3 - 540 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65907.peg.1413 CDS gi|333351980|gb|AFIZ01000027.1| 64519 62435 -1 - 2085 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65907.peg.1414 CDS gi|333351980|gb|AFIZ01000027.1| 65662 64697 -1 - 966 hypothetical protein - none -
fig|6666666.65907.peg.1415 CDS gi|333351980|gb|AFIZ01000027.1| 66422 65703 -2 - 720 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.65907.peg.1416 CDS gi|333351980|gb|AFIZ01000027.1| 66544 66786 1 + 243 Copper chaperone Copper homeostasis
fig|6666666.65907.peg.1417 CDS gi|333351980|gb|AFIZ01000027.1| 67032 66832 -3 - 201 hypothetical protein - none -
fig|6666666.65907.peg.1418 CDS gi|333351980|gb|AFIZ01000027.1| 68758 66998 -1 - 1761 hypothetical protein - none -
fig|6666666.65907.peg.1419 CDS gi|333351980|gb|AFIZ01000027.1| 70605 68818 -3 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.1420 CDS gi|333351980|gb|AFIZ01000027.1| 70666 71118 1 + 453 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein - none -
fig|6666666.65907.peg.1421 CDS gi|333351980|gb|AFIZ01000027.1| 71667 71371 -3 - 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.65907.peg.1422 CDS gi|333351980|gb|AFIZ01000027.1| 73222 72062 -1 - 1161 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65907.peg.1423 CDS gi|333351980|gb|AFIZ01000027.1| 73259 74332 2 + 1074 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.65907.peg.1424 CDS gi|333351980|gb|AFIZ01000027.1| 75355 74348 -1 - 1008 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) - none -
fig|6666666.65907.peg.1425 CDS gi|333351980|gb|AFIZ01000027.1| 75804 75352 -3 - 453 Ribonucleotide reduction protein NrdI - none -
fig|6666666.65907.peg.1426 CDS gi|333351980|gb|AFIZ01000027.1| 75947 76399 2 + 453 hypothetical protein - none -
fig|6666666.65907.peg.1427 CDS gi|333351980|gb|AFIZ01000027.1| 76396 76920 1 + 525 NADH-FMN oxidoreductase - none -
fig|6666666.65907.peg.1428 CDS gi|333351981|gb|AFIZ01000026.1| 1282 2094 1 + 813 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.65907.peg.1429 CDS gi|333351981|gb|AFIZ01000026.1| 2091 3614 3 + 1524 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.65907.peg.1430 CDS gi|333351981|gb|AFIZ01000026.1| 3607 4326 1 + 720 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.65907.peg.1431 CDS gi|333351981|gb|AFIZ01000026.1| 4479 5567 3 + 1089 hypothetical protein - none -
fig|6666666.65907.peg.1432 CDS gi|333351981|gb|AFIZ01000026.1| 6131 5736 -2 - 396 CrcB protein - none -
fig|6666666.65907.peg.1433 CDS gi|333351981|gb|AFIZ01000026.1| 6553 6128 -1 - 426 CrcB protein - none -
fig|6666666.65907.peg.1434 CDS gi|333351981|gb|AFIZ01000026.1| 8311 6674 -1 - 1638 hypothetical protein - none -
fig|6666666.65907.peg.1435 CDS gi|333351981|gb|AFIZ01000026.1| 8261 8560 2 + 300 hypothetical protein - none -
fig|6666666.65907.peg.1436 CDS gi|333351981|gb|AFIZ01000026.1| 8678 9121 2 + 444 Organic hydroperoxide resistance transcriptional regulator CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.65907.peg.1437 CDS gi|333351981|gb|AFIZ01000026.1| 10907 9186 -2 - 1722 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65907.peg.1438 CDS gi|333351981|gb|AFIZ01000026.1| 12120 10948 -3 - 1173 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.65907.peg.1439 CDS gi|333351981|gb|AFIZ01000026.1| 12158 12652 2 + 495 FIG00545938: hypothetical protein - none -
fig|6666666.65907.peg.1440 CDS gi|333351981|gb|AFIZ01000026.1| 12653 12847 2 + 195 hypothetical protein - none -
fig|6666666.65907.peg.1441 CDS gi|333351981|gb|AFIZ01000026.1| 12904 16458 1 + 3555 Conserved putative integral membrane protein - none -
fig|6666666.65907.peg.1442 CDS gi|333351981|gb|AFIZ01000026.1| 17519 18706 2 + 1188 hypothetical protein - none -
fig|6666666.65907.peg.1443 CDS gi|333351981|gb|AFIZ01000026.1| 18721 20424 1 + 1704 hypothetical protein - none -
fig|6666666.65907.peg.1444 CDS gi|333351981|gb|AFIZ01000026.1| 21489 20449 -3 - 1041 Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.65907.peg.1445 CDS gi|333351981|gb|AFIZ01000026.1| 22366 21503 -1 - 864 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65907.peg.1446 CDS gi|333351981|gb|AFIZ01000026.1| 23470 22370 -1 - 1101 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65907.peg.1447 CDS gi|333351981|gb|AFIZ01000026.1| 25068 23815 -3 - 1254 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65907.peg.1448 CDS gi|333351981|gb|AFIZ01000026.1| 25067 26923 2 + 1857 hypothetical protein - none -
fig|6666666.65907.peg.1449 CDS gi|333351981|gb|AFIZ01000026.1| 27075 26962 -3 - 114 hypothetical protein - none -
fig|6666666.65907.peg.1450 CDS gi|333351981|gb|AFIZ01000026.1| 27049 27951 1 + 903 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65907.peg.1451 CDS gi|333351981|gb|AFIZ01000026.1| 28399 29643 1 + 1245 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65907.peg.1452 CDS gi|333351981|gb|AFIZ01000026.1| 29653 31935 1 + 2283 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.1453 CDS gi|333351981|gb|AFIZ01000026.1| 32030 33112 2 + 1083 Oxido-reductase, and dehydratase; MocA - none -
fig|6666666.65907.peg.1454 CDS gi|333351981|gb|AFIZ01000026.1| 33255 33887 3 + 633 hypothetical protein - none -
fig|6666666.65907.peg.1455 CDS gi|333351981|gb|AFIZ01000026.1| 34707 33889 -3 - 819 hypothetical protein - none -
fig|6666666.65907.peg.1456 CDS gi|333351981|gb|AFIZ01000026.1| 35345 34695 -2 - 651 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1457 CDS gi|333351981|gb|AFIZ01000026.1| 36356 35355 -2 - 1002 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.65907.peg.1458 CDS gi|333351981|gb|AFIZ01000026.1| 36859 36374 -1 - 486 Transcriptional regulator, AsnC family - none -
fig|6666666.65907.peg.1459 CDS gi|333351981|gb|AFIZ01000026.1| 36921 38234 3 + 1314 hypothetical protein - none -
fig|6666666.65907.peg.1460 CDS gi|333351981|gb|AFIZ01000026.1| 39554 38631 -2 - 924 Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup Encapsulating protein for DyP-type peroxidase and ferritin-like protein oligomers
fig|6666666.65907.peg.1461 CDS gi|333351981|gb|AFIZ01000026.1| 39856 40038 1 + 183 hypothetical protein - none -
fig|6666666.65907.peg.1462 CDS gi|333351982|gb|AFIZ01000025.1| 223 1470 1 + 1248 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.1463 CDS gi|333351982|gb|AFIZ01000025.1| 1606 2712 1 + 1107 Two-component system sensor kinase - none -
fig|6666666.65907.peg.1464 CDS gi|333351982|gb|AFIZ01000025.1| 2807 3004 2 + 198 hypothetical protein - none -
fig|6666666.65907.peg.1465 CDS gi|333351982|gb|AFIZ01000025.1| 3044 3832 2 + 789 Nitrate/nitrite response regulator protein Nitrate and nitrite ammonification
fig|6666666.65907.peg.1466 CDS gi|333351982|gb|AFIZ01000025.1| 5259 3787 -3 - 1473 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65907.peg.1467 CDS gi|333351982|gb|AFIZ01000025.1| 5332 5676 1 + 345 hypothetical protein - none -
fig|6666666.65907.peg.1468 CDS gi|333351982|gb|AFIZ01000025.1| 6600 5992 -3 - 609 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.65907.peg.1469 CDS gi|333351983|gb|AFIZ01000024.1| 540 316 -3 - 225 FIG00544061: hypothetical protein - none -
fig|6666666.65907.peg.1470 CDS gi|333351983|gb|AFIZ01000024.1| 681 2003 3 + 1323 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.1471 CDS gi|333351983|gb|AFIZ01000024.1| 2022 2669 3 + 648 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65907.peg.1472 CDS gi|333351983|gb|AFIZ01000024.1| 2662 3741 1 + 1080 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65907.peg.1473 CDS gi|333351983|gb|AFIZ01000024.1| 3745 4503 1 + 759 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65907.peg.1474 CDS gi|333351983|gb|AFIZ01000024.1| 4514 6091 2 + 1578 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.1475 CDS gi|333351983|gb|AFIZ01000024.1| 6162 6728 3 + 567 putative transcriptional regulator (MarR family) - none -
fig|6666666.65907.peg.1476 CDS gi|333351983|gb|AFIZ01000024.1| 7894 6719 -1 - 1176 putative bicyclomycin resistance protein - none -
fig|6666666.65907.peg.1477 CDS gi|333351983|gb|AFIZ01000024.1| 8804 7989 -2 - 816 hypothetical protein - none -
fig|6666666.65907.peg.1478 CDS gi|333351983|gb|AFIZ01000024.1| 9751 8804 -1 - 948 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65907.peg.1479 CDS gi|333351983|gb|AFIZ01000024.1| 9786 11246 3 + 1461 FIG00543876: hypothetical protein - none -
fig|6666666.65907.peg.1480 CDS gi|333351983|gb|AFIZ01000024.1| 11246 12370 2 + 1125 Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2) - none -
fig|6666666.65907.peg.1481 CDS gi|333351983|gb|AFIZ01000024.1| 12367 14760 1 + 2394 serine/threonine protein kinase - none -
fig|6666666.65907.peg.1482 CDS gi|333351983|gb|AFIZ01000024.1| 16109 14769 -2 - 1341 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65907.peg.1483 CDS gi|333351983|gb|AFIZ01000024.1| 16150 16920 1 + 771 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.1484 CDS gi|333351983|gb|AFIZ01000024.1| 16913 17383 2 + 471 PAS/PAC domain (EC 2.7.3.-) - none -
fig|6666666.65907.peg.1485 CDS gi|333351983|gb|AFIZ01000024.1| 18597 17386 -3 - 1212 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.1486 CDS gi|333351983|gb|AFIZ01000024.1| 20062 18620 -1 - 1443 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.1487 CDS gi|333351983|gb|AFIZ01000024.1| 20905 20228 -1 - 678 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.65907.peg.1488 CDS gi|333351983|gb|AFIZ01000024.1| 22198 20912 -1 - 1287 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.65907.peg.1489 CDS gi|333351983|gb|AFIZ01000024.1| 23118 22198 -3 - 921 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.65907.peg.1490 CDS gi|333351983|gb|AFIZ01000024.1| 23939 23115 -2 - 825 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis
fig|6666666.65907.peg.1491 CDS gi|333351983|gb|AFIZ01000024.1| 25939 24164 -1 - 1776 ABC-type transport system ATPase component - none -
fig|6666666.65907.peg.1492 CDS gi|333351983|gb|AFIZ01000024.1| 27534 25936 -3 - 1599 putative ABC transporter permease protein - none -
fig|6666666.65907.peg.1493 CDS gi|333351983|gb|AFIZ01000024.1| 27754 27557 -1 - 198 hypothetical protein - none -
fig|6666666.65907.peg.1494 CDS gi|333351983|gb|AFIZ01000024.1| 30864 27751 -3 - 3114 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) - none -
fig|6666666.65907.peg.1495 CDS gi|333351983|gb|AFIZ01000024.1| 31124 32548 2 + 1425 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) - none -
fig|6666666.65907.peg.1496 CDS gi|333351983|gb|AFIZ01000024.1| 32665 33198 1 + 534 FIG00544802: hypothetical protein - none -
fig|6666666.65907.peg.1497 CDS gi|333351983|gb|AFIZ01000024.1| 33217 34134 1 + 918 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65907.peg.1498 CDS gi|333351983|gb|AFIZ01000024.1| 34131 34871 3 + 741 hypothetical protein - none -
fig|6666666.65907.peg.1499 CDS gi|333351983|gb|AFIZ01000024.1| 36647 34992 -2 - 1656 hypothetical protein - none -
fig|6666666.65907.peg.1500 CDS gi|333351983|gb|AFIZ01000024.1| 37435 36764 -1 - 672 hypothetical protein - none -
fig|6666666.65907.peg.1501 CDS gi|333351983|gb|AFIZ01000024.1| 38655 37444 -3 - 1212 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1502 CDS gi|333351983|gb|AFIZ01000024.1| 39755 38682 -2 - 1074 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) - none -
fig|6666666.65907.peg.1503 CDS gi|333351983|gb|AFIZ01000024.1| 40737 39775 -3 - 963 putative permease binding-protein component - none -
fig|6666666.65907.peg.1504 CDS gi|333351983|gb|AFIZ01000024.1| 41474 40734 -2 - 741 putative ABC transporter permease - none -
fig|6666666.65907.peg.1505 CDS gi|333351983|gb|AFIZ01000024.1| 42625 41471 -1 - 1155 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65907.peg.1506 CDS gi|333351983|gb|AFIZ01000024.1| 43263 42622 -3 - 642 Choline transporter, permease protein - none -
fig|6666666.65907.peg.1507 CDS gi|333351983|gb|AFIZ01000024.1| 44210 43260 -2 - 951 Putative alkylsulfatase (EC 1.14.11.17) - none -
fig|6666666.65907.peg.1508 CDS gi|333351983|gb|AFIZ01000024.1| 44449 44934 1 + 486 heat shock protein, Hsp20 family - none -
fig|6666666.65907.peg.1509 CDS gi|333351983|gb|AFIZ01000024.1| 46068 44935 -3 - 1134 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.65907.peg.1510 CDS gi|333351983|gb|AFIZ01000024.1| 48059 46065 -2 - 1995 PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.65907.peg.1511 CDS gi|333351983|gb|AFIZ01000024.1| 48548 48120 -2 - 429 putative ATP/GTP-binding protein - none -
fig|6666666.65907.peg.1512 CDS gi|333351983|gb|AFIZ01000024.1| 49292 48600 -2 - 693 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.65907.peg.1513 CDS gi|333351983|gb|AFIZ01000024.1| 50035 49289 -1 - 747 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65907.peg.1514 CDS gi|333351983|gb|AFIZ01000024.1| 50493 52844 3 + 2352 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.65907.peg.1515 CDS gi|333351983|gb|AFIZ01000024.1| 53439 52939 -3 - 501 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65907.peg.1516 CDS gi|333351983|gb|AFIZ01000024.1| 53869 54264 1 + 396 hypothetical protein - none -
fig|6666666.65907.peg.1517 CDS gi|333351983|gb|AFIZ01000024.1| 55047 54241 -3 - 807 possible protein-tyrosine phosphatase - none -
fig|6666666.65907.peg.1518 CDS gi|333351983|gb|AFIZ01000024.1| 55627 55130 -1 - 498 hypothetical protein - none -
fig|6666666.65907.peg.1519 CDS gi|333351983|gb|AFIZ01000024.1| 55678 56361 1 + 684 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1520 CDS gi|333351983|gb|AFIZ01000024.1| 56389 57174 1 + 786 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1521 CDS gi|333351983|gb|AFIZ01000024.1| 57182 58390 2 + 1209 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.65907.peg.1522 CDS gi|333351983|gb|AFIZ01000024.1| 58395 59450 3 + 1056 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.65907.peg.1523 CDS gi|333351983|gb|AFIZ01000024.1| 61130 59454 -2 - 1677 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.1524 CDS gi|333351983|gb|AFIZ01000024.1| 61410 61562 3 + 153 hypothetical protein - none -
fig|6666666.65907.peg.1525 CDS gi|333351983|gb|AFIZ01000024.1| 62553 61552 -3 - 1002 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65907.peg.1526 CDS gi|333351983|gb|AFIZ01000024.1| 63224 62553 -2 - 672 hypothetical protein - none -
fig|6666666.65907.peg.1527 CDS gi|333351983|gb|AFIZ01000024.1| 64359 63367 -3 - 993 hypothetical protein - none -
fig|6666666.65907.peg.1528 CDS gi|333351983|gb|AFIZ01000024.1| 65190 64369 -3 - 822 hypothetical protein - none -
fig|6666666.65907.peg.1529 CDS gi|333351983|gb|AFIZ01000024.1| 66676 65249 -1 - 1428 transmembrane protein, distant homology with ydbT - none -
fig|6666666.65907.peg.1530 CDS gi|333351983|gb|AFIZ01000024.1| 67137 66673 -3 - 465 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65907.peg.1531 CDS gi|333351983|gb|AFIZ01000024.1| 67692 67339 -3 - 354 hypothetical protein - none -
fig|6666666.65907.peg.1532 CDS gi|333351983|gb|AFIZ01000024.1| 69074 67725 -2 - 1350 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65907.peg.1533 CDS gi|333351983|gb|AFIZ01000024.1| 69114 69998 3 + 885 hypothetical protein - none -
fig|6666666.65907.peg.1534 CDS gi|333351983|gb|AFIZ01000024.1| 70508 70059 -2 - 450 ElaA protein cAMP signaling in bacteria
fig|6666666.65907.peg.1535 CDS gi|333351983|gb|AFIZ01000024.1| 70852 70532 -1 - 321 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.65907.peg.1536 CDS gi|333351983|gb|AFIZ01000024.1| 71363 72169 2 + 807 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB Alkanesulfonates Utilization
fig|6666666.65907.peg.1537 CDS gi|333351983|gb|AFIZ01000024.1| 72166 72957 1 + 792 Hydroxymethylpyrimidine ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.65907.peg.1538 CDS gi|333351983|gb|AFIZ01000024.1| 72954 73988 3 + 1035 Hydroxymethylpyrimidine ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.65907.peg.1539 CDS gi|333351983|gb|AFIZ01000024.1| 75299 74001 -2 - 1299 FIG00545517: hypothetical protein - none -
fig|6666666.65907.peg.1540 CDS gi|333351983|gb|AFIZ01000024.1| 76382 75336 -2 - 1047 hypothetical protein - none -
fig|6666666.65907.peg.1541 CDS gi|333351983|gb|AFIZ01000024.1| 76839 76387 -3 - 453 FIG00544477: hypothetical protein - none -
fig|6666666.65907.peg.1542 CDS gi|333351983|gb|AFIZ01000024.1| 77873 76839 -2 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65907.peg.1543 CDS gi|333351983|gb|AFIZ01000024.1| 79127 77931 -2 - 1197 hypothetical protein - none -
fig|6666666.65907.peg.1544 CDS gi|333351983|gb|AFIZ01000024.1| 79888 79187 -1 - 702 putative RNA methyltransferase - none -
fig|6666666.65907.peg.1545 CDS gi|333351983|gb|AFIZ01000024.1| 80552 79881 -2 - 672 hypothetical protein - none -
fig|6666666.65907.peg.1546 CDS gi|333351983|gb|AFIZ01000024.1| 81310 80759 -1 - 552 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.65907.peg.1547 CDS gi|333351983|gb|AFIZ01000024.1| 83150 81351 -2 - 1800 Putative secreted protein - none -
fig|6666666.65907.peg.1548 CDS gi|333351983|gb|AFIZ01000024.1| 83568 83185 -3 - 384 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65907.peg.1549 CDS gi|333351983|gb|AFIZ01000024.1| 84783 83599 -3 - 1185 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65907.peg.1550 CDS gi|333351983|gb|AFIZ01000024.1| 87685 84776 -1 - 2910 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65907.peg.1551 CDS gi|333351983|gb|AFIZ01000024.1| 87888 87766 -3 - 123 hypothetical protein - none -
fig|6666666.65907.peg.1552 CDS gi|333351983|gb|AFIZ01000024.1| 89012 88155 -2 - 858 hypothetical protein - none -
fig|6666666.65907.peg.1553 CDS gi|333351983|gb|AFIZ01000024.1| 89653 89009 -1 - 645 ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.1554 CDS gi|333351983|gb|AFIZ01000024.1| 90413 89775 -2 - 639 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1555 CDS gi|333351983|gb|AFIZ01000024.1| 90500 91060 2 + 561 Putative membrane protein - none -
fig|6666666.65907.peg.1556 CDS gi|333351983|gb|AFIZ01000024.1| 91071 91970 3 + 900 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1557 CDS gi|333351983|gb|AFIZ01000024.1| 93013 92513 -1 - 501 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) Sialic Acid Metabolism
fig|6666666.65907.peg.1558 CDS gi|333351983|gb|AFIZ01000024.1| 93976 93059 -1 - 918 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65907.peg.1559 CDS gi|333351983|gb|AFIZ01000024.1| 94031 94876 2 + 846 Protoporphyrinogen IX oxidase, novel form, HemJ (EC 1.3.-.-) Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.1560 CDS gi|333351983|gb|AFIZ01000024.1| 95396 94926 -2 - 471 hypothetical protein - none -
fig|6666666.65907.peg.1561 CDS gi|333351983|gb|AFIZ01000024.1| 95905 95411 -1 - 495 hypothetical protein - none -
fig|6666666.65907.peg.1562 CDS gi|333351983|gb|AFIZ01000024.1| 96606 95974 -3 - 633 putative two-component response regulator - none -
fig|6666666.65907.peg.1563 CDS gi|333351983|gb|AFIZ01000024.1| 97751 96603 -2 - 1149 sensor histidine kinase - none -
fig|6666666.65907.peg.1564 CDS gi|333351983|gb|AFIZ01000024.1| 98646 97777 -3 - 870 putative integral membrane protein - none -
fig|6666666.65907.peg.1565 CDS gi|333351983|gb|AFIZ01000024.1| 99708 98689 -3 - 1020 putative ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.1566 CDS gi|333351983|gb|AFIZ01000024.1| 100738 99977 -1 - 762 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - none -
fig|6666666.65907.peg.1567 CDS gi|333351983|gb|AFIZ01000024.1| 103464 100882 -3 - 2583 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65907.peg.1568 CDS gi|333351983|gb|AFIZ01000024.1| 103685 103966 2 + 282 hypothetical protein - none -
fig|6666666.65907.peg.1569 CDS gi|333351983|gb|AFIZ01000024.1| 104893 104300 -1 - 594 hypothetical protein - none -
fig|6666666.65907.peg.1570 CDS gi|333351983|gb|AFIZ01000024.1| 106167 104974 -3 - 1194 hypothetical protein - none -
fig|6666666.65907.peg.1571 CDS gi|333351983|gb|AFIZ01000024.1| 107975 106236 -2 - 1740 Nitrogen regulatory protein PII - none -
fig|6666666.65907.peg.1572 CDS gi|333351983|gb|AFIZ01000024.1| 108715 107972 -1 - 744 FMNH2-utilizing oxygenase - none -
fig|6666666.65907.peg.1573 CDS gi|333351983|gb|AFIZ01000024.1| 110109 108712 -3 - 1398 FIG01124584: hypothetical protein - none -
fig|6666666.65907.peg.1574 CDS gi|333351983|gb|AFIZ01000024.1| 111837 110122 -3 - 1716 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65907.peg.1575 CDS gi|333351983|gb|AFIZ01000024.1| 112718 111834 -2 - 885 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65907.peg.1576 CDS gi|333351983|gb|AFIZ01000024.1| 113752 112715 -1 - 1038 hypothetical protein - none -
fig|6666666.65907.peg.1577 CDS gi|333351983|gb|AFIZ01000024.1| 115362 113755 -3 - 1608 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65907.peg.1578 CDS gi|333351983|gb|AFIZ01000024.1| 115508 116869 2 + 1362 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.65907.peg.1579 CDS gi|333351983|gb|AFIZ01000024.1| 117829 116927 -1 - 903 Aliphatic amidase AmiE (EC 3.5.1.4) - none -
fig|6666666.65907.peg.1580 CDS gi|333351983|gb|AFIZ01000024.1| 119340 117922 -3 - 1419 serine protease - none -
fig|6666666.65907.peg.1581 CDS gi|333351983|gb|AFIZ01000024.1| 119705 121207 2 + 1503 Sulfate permease Cysteine Biosynthesis
fig|6666666.65907.peg.1582 CDS gi|333351983|gb|AFIZ01000024.1| 121303 121599 1 + 297 hypothetical protein - none -
fig|6666666.65907.peg.1583 CDS gi|333351983|gb|AFIZ01000024.1| 121809 122135 3 + 327 hypothetical protein - none -
fig|6666666.65907.peg.1584 CDS gi|333351983|gb|AFIZ01000024.1| 122138 123610 2 + 1473 hypothetical protein - none -
fig|6666666.65907.peg.1585 CDS gi|333351983|gb|AFIZ01000024.1| 123598 124797 1 + 1200 oxidoreductase - none -
fig|6666666.65907.peg.1586 CDS gi|333351983|gb|AFIZ01000024.1| 124890 125462 3 + 573 hypothetical protein - none -
fig|6666666.65907.peg.1587 CDS gi|333351983|gb|AFIZ01000024.1| 125668 126756 1 + 1089 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.65907.peg.1588 CDS gi|333351983|gb|AFIZ01000024.1| 127667 126741 -2 - 927 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65907.peg.1589 CDS gi|333351983|gb|AFIZ01000024.1| 127691 128887 2 + 1197 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.1590 CDS gi|333351983|gb|AFIZ01000024.1| 129093 128902 -3 - 192 hypothetical protein - none -
fig|6666666.65907.peg.1591 CDS gi|333351983|gb|AFIZ01000024.1| 129831 131198 3 + 1368 Proline iminopeptidase (EC 3.4.11.5) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65907.peg.1592 CDS gi|333351983|gb|AFIZ01000024.1| 131235 132749 3 + 1515 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.65907.peg.1593 CDS gi|333351983|gb|AFIZ01000024.1| 132930 134144 3 + 1215 hypothetical protein - none -
fig|6666666.65907.peg.1594 CDS gi|333351983|gb|AFIZ01000024.1| 134288 134650 2 + 363 putative integral membrane protein - none -
fig|6666666.65907.peg.1595 CDS gi|333351983|gb|AFIZ01000024.1| 135129 134674 -3 - 456 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65907.peg.1596 CDS gi|333351983|gb|AFIZ01000024.1| 136384 135185 -1 - 1200 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65907.peg.1597 CDS gi|333351983|gb|AFIZ01000024.1| 136504 137547 1 + 1044 hypothetical protein - none -
fig|6666666.65907.peg.1598 CDS gi|333351983|gb|AFIZ01000024.1| 137763 138788 3 + 1026 hypothetical protein - none -
fig|6666666.65907.peg.1599 CDS gi|333351983|gb|AFIZ01000024.1| 139527 138916 -3 - 612 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65907.peg.1600 CDS gi|333351983|gb|AFIZ01000024.1| 141377 139524 -2 - 1854 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65907.peg.1601 CDS gi|333351983|gb|AFIZ01000024.1| 141561 142580 3 + 1020 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.1602 CDS gi|333351984|gb|AFIZ01000023.1| 907 2 -1 - 906 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65907.peg.1603 CDS gi|333351984|gb|AFIZ01000023.1| 1163 1023 -2 - 141 hypothetical protein - none -
fig|6666666.65907.peg.1604 CDS gi|333351984|gb|AFIZ01000023.1| 2991 1348 -3 - 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65907.peg.1605 CDS gi|333351984|gb|AFIZ01000023.1| 3028 3297 1 + 270 hypothetical protein - none -
fig|6666666.65907.peg.1606 CDS gi|333351984|gb|AFIZ01000023.1| 3264 4679 3 + 1416 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65907.peg.1607 CDS gi|333351984|gb|AFIZ01000023.1| 4877 5503 2 + 627 FIG00546460: hypothetical protein - none -
fig|6666666.65907.peg.1608 CDS gi|333351984|gb|AFIZ01000023.1| 7103 5919 -2 - 1185 Putative cytoplasmic protein - none -
fig|6666666.65907.peg.1609 CDS gi|333351984|gb|AFIZ01000023.1| 7450 7139 -1 - 312 hypothetical protein - none -
fig|6666666.65907.peg.1610 CDS gi|333351985|gb|AFIZ01000022.1| 748 413 -1 - 336 hypothetical protein - none -
fig|6666666.65907.peg.1611 CDS gi|333351985|gb|AFIZ01000022.1| 1104 745 -3 - 360 hypothetical protein - none -
fig|6666666.65907.peg.1612 CDS gi|333351985|gb|AFIZ01000022.1| 1304 1191 -2 - 114 hypothetical protein - none -
fig|6666666.65907.peg.1613 CDS gi|333351985|gb|AFIZ01000022.1| 2452 1526 -1 - 927 hypothetical protein - none -
fig|6666666.65907.peg.1614 CDS gi|333351985|gb|AFIZ01000022.1| 3018 2584 -3 - 435 hypothetical protein - none -
fig|6666666.65907.peg.1615 CDS gi|333351985|gb|AFIZ01000022.1| 4419 3043 -3 - 1377 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.65907.peg.1616 CDS gi|333351985|gb|AFIZ01000022.1| 5923 4412 -1 - 1512 hypothetical protein - none -
fig|6666666.65907.peg.1617 CDS gi|333351985|gb|AFIZ01000022.1| 7496 5937 -2 - 1560 Phage terminase, large subunit # Pham2 Phage packaging machinery
fig|6666666.65907.peg.1618 CDS gi|333351985|gb|AFIZ01000022.1| 8709 7972 -3 - 738 Phage protein - none -
fig|6666666.65907.peg.1619 CDS gi|333351985|gb|AFIZ01000022.1| 9173 8724 -2 - 450 hypothetical protein - none -
fig|6666666.65907.peg.1620 CDS gi|333351985|gb|AFIZ01000022.1| 10163 9588 -2 - 576 hypothetical protein - none -
fig|6666666.65907.peg.1621 CDS gi|333351985|gb|AFIZ01000022.1| 10471 10160 -1 - 312 hypothetical protein - none -
fig|6666666.65907.peg.1622 CDS gi|333351985|gb|AFIZ01000022.1| 10896 10597 -3 - 300 FIG00545001: hypothetical protein - none -
fig|6666666.65907.peg.1623 CDS gi|333351985|gb|AFIZ01000022.1| 11437 11240 -1 - 198 hypothetical protein - none -
fig|6666666.65907.peg.1624 CDS gi|333351985|gb|AFIZ01000022.1| 12395 12108 -2 - 288 hypothetical protein - none -
fig|6666666.65907.peg.1625 CDS gi|333351985|gb|AFIZ01000022.1| 12607 12392 -1 - 216 hypothetical protein - none -
fig|6666666.65907.peg.1626 CDS gi|333351985|gb|AFIZ01000022.1| 12798 12604 -3 - 195 hypothetical protein - none -
fig|6666666.65907.peg.1627 CDS gi|333351985|gb|AFIZ01000022.1| 13189 12791 -1 - 399 hypothetical protein - none -
fig|6666666.65907.peg.1628 CDS gi|333351985|gb|AFIZ01000022.1| 13392 13186 -3 - 207 hypothetical protein - none -
fig|6666666.65907.peg.1629 CDS gi|333351985|gb|AFIZ01000022.1| 13746 13576 -3 - 171 hypothetical protein - none -
fig|6666666.65907.peg.1630 CDS gi|333351985|gb|AFIZ01000022.1| 14029 13739 -1 - 291 hypothetical protein - none -
fig|6666666.65907.peg.1631 CDS gi|333351985|gb|AFIZ01000022.1| 14259 14026 -3 - 234 hypothetical protein - none -
fig|6666666.65907.peg.1632 CDS gi|333351985|gb|AFIZ01000022.1| 14621 14256 -2 - 366 hypothetical protein - none -
fig|6666666.65907.peg.1633 CDS gi|333351985|gb|AFIZ01000022.1| 14752 14621 -1 - 132 hypothetical protein - none -
fig|6666666.65907.peg.1634 CDS gi|333351985|gb|AFIZ01000022.1| 15291 15016 -3 - 276 hypothetical protein - none -
fig|6666666.65907.peg.1635 CDS gi|333351985|gb|AFIZ01000022.1| 16041 15514 -3 - 528 hypothetical protein - none -
fig|6666666.65907.peg.1636 CDS gi|333351985|gb|AFIZ01000022.1| 16379 16038 -2 - 342 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65907.peg.1637 CDS gi|333351985|gb|AFIZ01000022.1| 17047 16580 -1 - 468 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65907.peg.1638 CDS gi|333351985|gb|AFIZ01000022.1| 17546 17049 -2 - 498 hypothetical protein - none -
fig|6666666.65907.peg.1639 CDS gi|333351985|gb|AFIZ01000022.1| 17884 17543 -1 - 342 hypothetical protein - none -
fig|6666666.65907.peg.1640 CDS gi|333351985|gb|AFIZ01000022.1| 19390 19166 -1 - 225 hypothetical protein - none -
fig|6666666.65907.peg.1641 CDS gi|333351985|gb|AFIZ01000022.1| 19791 19471 -3 - 321 hypothetical protein - none -
fig|6666666.65907.peg.1642 CDS gi|333351985|gb|AFIZ01000022.1| 20863 19814 -1 - 1050 Phage protein - none -
fig|6666666.65907.peg.1643 CDS gi|333351985|gb|AFIZ01000022.1| 21111 20860 -3 - 252 hypothetical protein - none -
fig|6666666.65907.peg.1644 CDS gi|333351985|gb|AFIZ01000022.1| 21637 21104 -1 - 534 hypothetical protein - none -
fig|6666666.65907.peg.1645 CDS gi|333351985|gb|AFIZ01000022.1| 21933 21634 -3 - 300 hypothetical protein - none -
fig|6666666.65907.peg.1646 CDS gi|333351985|gb|AFIZ01000022.1| 22298 21930 -2 - 369 hypothetical protein - none -
fig|6666666.65907.peg.1647 CDS gi|333351985|gb|AFIZ01000022.1| 22630 22295 -1 - 336 hypothetical protein - none -
fig|6666666.65907.peg.1648 CDS gi|333351985|gb|AFIZ01000022.1| 22848 22627 -3 - 222 hypothetical protein - none -
fig|6666666.65907.peg.1649 CDS gi|333351985|gb|AFIZ01000022.1| 23238 22918 -3 - 321 integration host factor - none -
fig|6666666.65907.peg.1650 CDS gi|333351985|gb|AFIZ01000022.1| 23811 24302 3 + 492 hypothetical protein - none -
fig|6666666.65907.peg.1651 CDS gi|333351985|gb|AFIZ01000022.1| 25682 24894 -2 - 789 Phage antirepressor protein - none -
fig|6666666.65907.peg.1652 CDS gi|333351985|gb|AFIZ01000022.1| 25942 25724 -1 - 219 hypothetical protein - none -
fig|6666666.65907.peg.1653 CDS gi|333351985|gb|AFIZ01000022.1| 26546 26896 2 + 351 hypothetical protein - none -
fig|6666666.65907.peg.1654 CDS gi|333351985|gb|AFIZ01000022.1| 27253 28266 1 + 1014 hypothetical protein - none -
fig|6666666.65907.peg.1655 CDS gi|333351985|gb|AFIZ01000022.1| 28296 28415 3 + 120 hypothetical protein - none -
fig|6666666.65907.peg.1656 CDS gi|333351985|gb|AFIZ01000022.1| 28500 29681 3 + 1182 hypothetical protein - none -
fig|6666666.65907.peg.1657 CDS gi|333351985|gb|AFIZ01000022.1| 30920 29712 -2 - 1209 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.65907.peg.1658 CDS gi|333351985|gb|AFIZ01000022.1| 32360 30948 -2 - 1413 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.65907.peg.1659 CDS gi|333351985|gb|AFIZ01000022.1| 34137 32524 -3 - 1614 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65907.peg.1660 CDS gi|333351985|gb|AFIZ01000022.1| 34792 34262 -1 - 531 hypothetical protein - none -
fig|6666666.65907.peg.1661 CDS gi|333351985|gb|AFIZ01000022.1| 35205 34792 -3 - 414 hypothetical protein - none -
fig|6666666.65907.peg.1662 CDS gi|333351985|gb|AFIZ01000022.1| 35490 36146 3 + 657 hypothetical protein - none -
fig|6666666.65907.peg.1663 CDS gi|333351985|gb|AFIZ01000022.1| 36157 37119 1 + 963 HTH-type transcriptional activator tipA - none -
fig|6666666.65907.peg.1664 CDS gi|333351985|gb|AFIZ01000022.1| 37669 37091 -1 - 579 GCN5-related N-acetyltransferase - none -
fig|6666666.65907.peg.1665 CDS gi|333351985|gb|AFIZ01000022.1| 38895 37681 -3 - 1215 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.65907.peg.1666 CDS gi|333351985|gb|AFIZ01000022.1| 39417 38908 -3 - 510 Nitrite-sensitive transcriptional repressor NsrR Nitrosative stress;
Oxidative stress
fig|6666666.65907.peg.1667 CDS gi|333351985|gb|AFIZ01000022.1| 39896 39591 -2 - 306 YlxP-like protein NusA-TFII Cluster
fig|6666666.65907.peg.1668 CDS gi|333351985|gb|AFIZ01000022.1| 40339 39926 -1 - 414 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65907.peg.1669 CDS gi|333351985|gb|AFIZ01000022.1| 41256 40351 -3 - 906 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65907.peg.1670 CDS gi|333351985|gb|AFIZ01000022.1| 42191 41268 -2 - 924 FIG173306: hypothetical protein - none -
fig|6666666.65907.peg.1671 CDS gi|333351985|gb|AFIZ01000022.1| 43210 42188 -1 - 1023 Possible membrane protein - none -
fig|6666666.65907.peg.1672 CDS gi|333351985|gb|AFIZ01000022.1| 43748 43221 -2 - 528 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65907.peg.1673 CDS gi|333351985|gb|AFIZ01000022.1| 44470 43868 -1 - 603 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65907.peg.1674 CDS gi|333351985|gb|AFIZ01000022.1| 44847 44467 -3 - 381 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65907.peg.1675 CDS gi|333351985|gb|AFIZ01000022.1| 45733 44840 -1 - 894 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65907.peg.1676 CDS gi|333351985|gb|AFIZ01000022.1| 46338 45733 -3 - 606 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65907.peg.1677 CDS gi|333351985|gb|AFIZ01000022.1| 48802 46331 -1 - 2472 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65907.peg.1678 CDS gi|333351985|gb|AFIZ01000022.1| 49423 48842 -1 - 582 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65907.peg.1679 CDS gi|333351985|gb|AFIZ01000022.1| 50461 49424 -1 - 1038 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65907.peg.1680 CDS gi|333351985|gb|AFIZ01000022.1| 51837 50467 -3 - 1371 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.1681 CDS gi|333351985|gb|AFIZ01000022.1| 51973 52449 1 + 477 hypothetical protein - none -
fig|6666666.65907.peg.1682 CDS gi|333351985|gb|AFIZ01000022.1| 52475 52948 2 + 474 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65907.peg.1683 CDS gi|333351985|gb|AFIZ01000022.1| 53667 53053 -3 - 615 Protein of unknown function DUF218 - none -
fig|6666666.65907.peg.1684 CDS gi|333351985|gb|AFIZ01000022.1| 53790 54176 3 + 387 rhodanese-related sulfurtransferase - none -
fig|6666666.65907.peg.1685 CDS gi|333351985|gb|AFIZ01000022.1| 54236 54787 2 + 552 Transcriptional regulator, MarR family - none -
fig|6666666.65907.peg.1686 CDS gi|333351986|gb|AFIZ01000021.1| 1474 113 -1 - 1362 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65907.peg.1687 CDS gi|333351986|gb|AFIZ01000021.1| 1806 2780 3 + 975 Transcriptional regulator, AraC family - none -
fig|6666666.65907.peg.1688 CDS gi|333351986|gb|AFIZ01000021.1| 4293 2791 -3 - 1503 putative coenzyme A transferase - none -
fig|6666666.65907.peg.1689 CDS gi|333351986|gb|AFIZ01000021.1| 5932 4430 -1 - 1503 putative coenzyme A transferase - none -
fig|6666666.65907.peg.1690 CDS gi|333351986|gb|AFIZ01000021.1| 6102 7307 3 + 1206 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65907.peg.1691 CDS gi|333351986|gb|AFIZ01000021.1| 7346 8083 2 + 738 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65907.peg.1692 CDS gi|333351986|gb|AFIZ01000021.1| 8640 8080 -3 - 561 hypothetical protein - none -
fig|6666666.65907.peg.1693 CDS gi|333351986|gb|AFIZ01000021.1| 9483 8707 -3 - 777 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65907.peg.1694 CDS gi|333351986|gb|AFIZ01000021.1| 10430 9507 -2 - 924 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65907.peg.1695 CDS gi|333351986|gb|AFIZ01000021.1| 11495 10443 -2 - 1053 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65907.peg.1696 CDS gi|333351986|gb|AFIZ01000021.1| 12600 11506 -3 - 1095 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65907.peg.1697 CDS gi|333351986|gb|AFIZ01000021.1| 13735 12719 -1 - 1017 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65907.peg.1698 CDS gi|333351986|gb|AFIZ01000021.1| 14446 13760 -1 - 687 transcriptional regulatory protein - none -
fig|6666666.65907.peg.1699 CDS gi|333351986|gb|AFIZ01000021.1| 14668 15459 1 + 792 hypothetical protein - none -
fig|6666666.65907.peg.1700 CDS gi|333351986|gb|AFIZ01000021.1| 15482 16144 2 + 663 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65907.peg.1701 CDS gi|333351986|gb|AFIZ01000021.1| 17047 16154 -1 - 894 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65907.peg.1702 CDS gi|333351986|gb|AFIZ01000021.1| 17119 18324 1 + 1206 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65907.peg.1703 CDS gi|333351986|gb|AFIZ01000021.1| 18524 18703 2 + 180 FIG00544089: hypothetical protein - none -
fig|6666666.65907.peg.1704 CDS gi|333351986|gb|AFIZ01000021.1| 20055 18958 -3 - 1098 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1705 CDS gi|333351986|gb|AFIZ01000021.1| 20462 20073 -2 - 390 hypothetical protein - none -
fig|6666666.65907.peg.1706 CDS gi|333351986|gb|AFIZ01000021.1| 20575 21618 1 + 1044 acyl-CoA hydrolase - none -
fig|6666666.65907.peg.1707 CDS gi|333351986|gb|AFIZ01000021.1| 24002 21642 -2 - 2361 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1708 CDS gi|333351986|gb|AFIZ01000021.1| 24694 24023 -1 - 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1709 CDS gi|333351986|gb|AFIZ01000021.1| 24933 24691 -3 - 243 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1710 CDS gi|333351986|gb|AFIZ01000021.1| 26557 25127 -1 - 1431 Na+/H+-dicarboxylate symporter - none -
fig|6666666.65907.peg.1711 CDS gi|333351986|gb|AFIZ01000021.1| 29014 26810 -1 - 2205 Protease II (EC 3.4.21.83) - none -
fig|6666666.65907.peg.1712 CDS gi|333351986|gb|AFIZ01000021.1| 29938 29039 -1 - 900 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1713 CDS gi|333351986|gb|AFIZ01000021.1| 30196 31857 1 + 1662 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.65907.peg.1714 CDS gi|333351986|gb|AFIZ01000021.1| 31859 32785 2 + 927 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65907.peg.1715 CDS gi|333351986|gb|AFIZ01000021.1| 32778 33734 3 + 957 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65907.peg.1716 CDS gi|333351986|gb|AFIZ01000021.1| 33731 35407 2 + 1677 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65907.peg.1717 CDS gi|333351986|gb|AFIZ01000021.1| 35711 37225 2 + 1515 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65907.peg.1718 CDS gi|333351986|gb|AFIZ01000021.1| 37225 38148 1 + 924 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65907.peg.1719 CDS gi|333351986|gb|AFIZ01000021.1| 38234 39370 2 + 1137 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65907.peg.1720 CDS gi|333351986|gb|AFIZ01000021.1| 39488 42925 2 + 3438 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65907.peg.1721 CDS gi|333351986|gb|AFIZ01000021.1| 43384 42956 -1 - 429 Transcriptional regulator, AsnC family - none -
fig|6666666.65907.peg.1722 CDS gi|333351986|gb|AFIZ01000021.1| 43468 44115 1 + 648 Transporter, LysE family - none -
fig|6666666.65907.peg.1723 CDS gi|333351986|gb|AFIZ01000021.1| 44863 44138 -1 - 726 hypothetical protein - none -
fig|6666666.65907.peg.1724 CDS gi|333351986|gb|AFIZ01000021.1| 45361 44909 -1 - 453 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.65907.peg.1725 CDS gi|333351986|gb|AFIZ01000021.1| 47118 45361 -3 - 1758 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) - none -
fig|6666666.65907.peg.1726 CDS gi|333351986|gb|AFIZ01000021.1| 47786 47118 -2 - 669 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1727 CDS gi|333351986|gb|AFIZ01000021.1| 48925 47798 -1 - 1128 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65907.peg.1728 CDS gi|333351986|gb|AFIZ01000021.1| 49816 48980 -1 - 837 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1729 CDS gi|333351986|gb|AFIZ01000021.1| 50709 49813 -3 - 897 Oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.65907.peg.1730 CDS gi|333351986|gb|AFIZ01000021.1| 51102 50827 -3 - 276 hypothetical protein - none -
fig|6666666.65907.peg.1731 CDS gi|333351986|gb|AFIZ01000021.1| 51365 51099 -2 - 267 Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-) Hydroxyaromatic decarboxylase family
fig|6666666.65907.peg.1732 CDS gi|333351986|gb|AFIZ01000021.1| 52789 51362 -1 - 1428 Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-) Hydroxyaromatic decarboxylase family
fig|6666666.65907.peg.1733 CDS gi|333351986|gb|AFIZ01000021.1| 53430 52801 -3 - 630 Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-) Hydroxyaromatic decarboxylase family
fig|6666666.65907.peg.1734 CDS gi|333351986|gb|AFIZ01000021.1| 53534 53914 2 + 381 Transcriptional regulator, MarR family - none -
fig|6666666.65907.peg.1735 CDS gi|333351986|gb|AFIZ01000021.1| 55522 54035 -1 - 1488 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65907.peg.1736 CDS gi|333351986|gb|AFIZ01000021.1| 55636 56067 1 + 432 hypothetical protein - none -
fig|6666666.65907.peg.1737 CDS gi|333351986|gb|AFIZ01000021.1| 57336 56083 -3 - 1254 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.65907.peg.1738 CDS gi|333351986|gb|AFIZ01000021.1| 59047 57365 -1 - 1683 L-lactate permease Lactate utilization
fig|6666666.65907.peg.1739 CDS gi|333351986|gb|AFIZ01000021.1| 60008 59172 -2 - 837 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65907.peg.1740 CDS gi|333351986|gb|AFIZ01000021.1| 61080 60016 -3 - 1065 hypothetical protein - none -
fig|6666666.65907.peg.1741 CDS gi|333351986|gb|AFIZ01000021.1| 61860 61096 -3 - 765 hypothetical protein - none -
fig|6666666.65907.peg.1742 CDS gi|333351986|gb|AFIZ01000021.1| 63238 61958 -1 - 1281 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1743 CDS gi|333351986|gb|AFIZ01000021.1| 63280 63699 1 + 420 HIT family protein - none -
fig|6666666.65907.peg.1744 CDS gi|333351986|gb|AFIZ01000021.1| 63706 64686 1 + 981 hypothetical protein - none -
fig|6666666.65907.peg.1745 CDS gi|333351986|gb|AFIZ01000021.1| 65113 65661 1 + 549 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65907.peg.1746 CDS gi|333351986|gb|AFIZ01000021.1| 65665 66405 1 + 741 ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.1747 CDS gi|333351986|gb|AFIZ01000021.1| 66407 68962 2 + 2556 hypothetical protein - none -
fig|6666666.65907.peg.1748 CDS gi|333351986|gb|AFIZ01000021.1| 70327 68969 -1 - 1359 Sodium/glutamate symporter - none -
fig|6666666.65907.peg.1749 CDS gi|333351986|gb|AFIZ01000021.1| 70472 71164 2 + 693 hypothetical protein - none -
fig|6666666.65907.peg.1750 CDS gi|333351986|gb|AFIZ01000021.1| 72898 71189 -1 - 1710 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.65907.peg.1751 CDS gi|333351986|gb|AFIZ01000021.1| 73695 72976 -3 - 720 two-component system, response regulator - none -
fig|6666666.65907.peg.1752 CDS gi|333351986|gb|AFIZ01000021.1| 73845 74606 3 + 762 Putative secreted protein - none -
fig|6666666.65907.peg.1753 CDS gi|333351986|gb|AFIZ01000021.1| 76220 74619 -2 - 1602 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.65907.peg.1754 CDS gi|333351986|gb|AFIZ01000021.1| 77103 76228 -3 - 876 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.65907.peg.1755 CDS gi|333351986|gb|AFIZ01000021.1| 77726 77100 -2 - 627 Putative phosphatase YfbT - none -
fig|6666666.65907.peg.1756 CDS gi|333351986|gb|AFIZ01000021.1| 77765 78982 2 + 1218 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.65907.peg.1757 CDS gi|333351986|gb|AFIZ01000021.1| 78997 80337 1 + 1341 Permease - none -
fig|6666666.65907.peg.1758 CDS gi|333351986|gb|AFIZ01000021.1| 81524 82075 2 + 552 putative regulatory protein - none -
fig|6666666.65907.peg.1759 CDS gi|333351986|gb|AFIZ01000021.1| 83781 82078 -3 - 1704 hypothetical protein - none -
fig|6666666.65907.peg.1760 CDS gi|333351986|gb|AFIZ01000021.1| 86375 83781 -2 - 2595 hypothetical protein - none -
fig|6666666.65907.peg.1761 CDS gi|333351986|gb|AFIZ01000021.1| 86505 87278 3 + 774 Uncharacterized ABC transporter ATP-binding protein Rv1348/MT1390 - none -
fig|6666666.65907.peg.1762 CDS gi|333351986|gb|AFIZ01000021.1| 88111 87443 -1 - 669 short chain dehydrogenase - none -
fig|6666666.65907.peg.1763 CDS gi|333351986|gb|AFIZ01000021.1| 88631 88122 -2 - 510 GCN5-related N-acetyltransferase - none -
fig|6666666.65907.peg.1764 CDS gi|333351986|gb|AFIZ01000021.1| 89457 88669 -3 - 789 hypothetical protein - none -
fig|6666666.65907.peg.1765 CDS gi|333351986|gb|AFIZ01000021.1| 89951 91546 2 + 1596 Putative amino acid export carrier protein - none -
fig|6666666.65907.peg.1766 CDS gi|333351986|gb|AFIZ01000021.1| 91592 91918 2 + 327 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65907.peg.1767 CDS gi|333351986|gb|AFIZ01000021.1| 91939 93522 1 + 1584 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.65907.peg.1768 CDS gi|333351986|gb|AFIZ01000021.1| 93534 94040 3 + 507 hypothetical protein - none -
fig|6666666.65907.peg.1769 CDS gi|333351986|gb|AFIZ01000021.1| 94070 94882 2 + 813 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65907.peg.1770 CDS gi|333351986|gb|AFIZ01000021.1| 96047 94860 -2 - 1188 Transcriptional regulator, LacI family - none -
fig|6666666.65907.peg.1771 CDS gi|333351986|gb|AFIZ01000021.1| 96268 97245 1 + 978 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65907.peg.1772 CDS gi|333351986|gb|AFIZ01000021.1| 97242 97946 3 + 705 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65907.peg.1773 CDS gi|333351986|gb|AFIZ01000021.1| 97943 98839 2 + 897 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65907.peg.1774 CDS gi|333351986|gb|AFIZ01000021.1| 99702 98851 -3 - 852 hypothetical protein - none -
fig|6666666.65907.peg.1775 CDS gi|333351986|gb|AFIZ01000021.1| 100892 99759 -2 - 1134 NADH-dependent flavin oxidoreductase - none -
fig|6666666.65907.peg.1776 CDS gi|333351986|gb|AFIZ01000021.1| 101887 100934 -1 - 954 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.65907.peg.1777 CDS gi|333351986|gb|AFIZ01000021.1| 101959 103356 1 + 1398 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.65907.peg.1778 CDS gi|333351986|gb|AFIZ01000021.1| 104994 103543 -3 - 1452 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.65907.peg.1779 CDS gi|333351986|gb|AFIZ01000021.1| 104993 105874 2 + 882 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65907.peg.1780 CDS gi|333351986|gb|AFIZ01000021.1| 105988 106572 1 + 585 thiamine biosynthesis protein x - none -
fig|6666666.65907.peg.1781 CDS gi|333351986|gb|AFIZ01000021.1| 107088 106600 -3 - 489 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65907.peg.1782 CDS gi|333351986|gb|AFIZ01000021.1| 107912 107085 -2 - 828 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65907.peg.1783 CDS gi|333351986|gb|AFIZ01000021.1| 108524 107934 -2 - 591 CarD-like transcriptional regulator - none -
fig|6666666.65907.peg.1784 CDS gi|333351986|gb|AFIZ01000021.1| 108644 109237 2 + 594 hypothetical protein - none -
fig|6666666.65907.peg.1785 CDS gi|333351986|gb|AFIZ01000021.1| 109348 110796 1 + 1449 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65907.peg.1786 CDS gi|333351986|gb|AFIZ01000021.1| 110793 111443 3 + 651 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.65907.peg.1787 CDS gi|333351986|gb|AFIZ01000021.1| 112162 111440 -1 - 723 hypothetical protein - none -
fig|6666666.65907.peg.1788 CDS gi|333351986|gb|AFIZ01000021.1| 112848 112210 -3 - 639 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.65907.peg.1789 CDS gi|333351986|gb|AFIZ01000021.1| 112850 113794 2 + 945 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65907.peg.1790 CDS gi|333351986|gb|AFIZ01000021.1| 116715 114106 -3 - 2610 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65907.peg.1791 CDS gi|333351986|gb|AFIZ01000021.1| 117052 118836 1 + 1785 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.1792 CDS gi|333351986|gb|AFIZ01000021.1| 119627 118962 -2 - 666 hypothetical protein - none -
fig|6666666.65907.peg.1793 CDS gi|333351986|gb|AFIZ01000021.1| 121746 121414 -3 - 333 hypothetical protein - none -
fig|6666666.65907.peg.1794 CDS gi|333351986|gb|AFIZ01000021.1| 122209 121757 -1 - 453 hypothetical protein - none -
fig|6666666.65907.peg.1795 CDS gi|333351986|gb|AFIZ01000021.1| 122636 122214 -2 - 423 hypothetical protein - none -
fig|6666666.65907.peg.1796 CDS gi|333351986|gb|AFIZ01000021.1| 123415 122639 -1 - 777 Phage lysin, N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) - none -
fig|6666666.65907.peg.1797 CDS gi|333351986|gb|AFIZ01000021.1| 123621 123469 -3 - 153 hypothetical protein - none -
fig|6666666.65907.peg.1798 CDS gi|333351986|gb|AFIZ01000021.1| 123587 124036 2 + 450 hypothetical protein - none -
fig|6666666.65907.peg.1799 CDS gi|333351986|gb|AFIZ01000021.1| 126209 124812 -2 - 1398 hypothetical protein - none -
fig|6666666.65907.peg.1800 CDS gi|333351986|gb|AFIZ01000021.1| 126788 126243 -2 - 546 hypothetical protein - none -
fig|6666666.65907.peg.1801 CDS gi|333351986|gb|AFIZ01000021.1| 127858 126863 -1 - 996 hypothetical protein - none -
fig|6666666.65907.peg.1802 CDS gi|333351986|gb|AFIZ01000021.1| 128168 127944 -2 - 225 hypothetical protein - none -
fig|6666666.65907.peg.1803 CDS gi|333351986|gb|AFIZ01000021.1| 129862 128294 -1 - 1569 hypothetical protein - none -
fig|6666666.65907.peg.1804 CDS gi|333351986|gb|AFIZ01000021.1| 137056 130742 -1 - 6315 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.65907.peg.1805 CDS gi|333351986|gb|AFIZ01000021.1| 137769 137473 -3 - 297 hypothetical protein - none -
fig|6666666.65907.peg.1806 CDS gi|333351986|gb|AFIZ01000021.1| 138255 137932 -3 - 324 Collagen-like surface protein - none -
fig|6666666.65907.peg.1807 CDS gi|333351986|gb|AFIZ01000021.1| 138943 138338 -1 - 606 hypothetical protein - none -
fig|6666666.65907.peg.1808 CDS gi|333351987|gb|AFIZ01000020.1| 41 745 2 + 705 hypothetical protein - none -
fig|6666666.65907.peg.1809 CDS gi|333351987|gb|AFIZ01000020.1| 2413 818 -1 - 1596 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65907.peg.1810 CDS gi|333351987|gb|AFIZ01000020.1| 4325 2418 -2 - 1908 hypothetical protein - none -
fig|6666666.65907.peg.1811 CDS gi|333351987|gb|AFIZ01000020.1| 5511 4354 -3 - 1158 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65907.peg.1812 CDS gi|333351987|gb|AFIZ01000020.1| 7065 5536 -3 - 1530 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65907.peg.1813 CDS gi|333351987|gb|AFIZ01000020.1| 7138 7560 1 + 423 hypothetical protein - none -
fig|6666666.65907.peg.1814 CDS gi|333351987|gb|AFIZ01000020.1| 8731 7865 -1 - 867 hypothetical protein - none -
fig|6666666.65907.peg.1815 CDS gi|333351987|gb|AFIZ01000020.1| 9330 8731 -3 - 600 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65907.peg.1816 CDS gi|333351987|gb|AFIZ01000020.1| 9563 9871 2 + 309 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.65907.peg.1817 CDS gi|333351987|gb|AFIZ01000020.1| 11571 9961 -3 - 1611 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65907.peg.1818 CDS gi|333351987|gb|AFIZ01000020.1| 11878 11579 -1 - 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65907.peg.1819 CDS gi|333351987|gb|AFIZ01000020.1| 14394 12016 -3 - 2379 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65907.peg.1820 CDS gi|333351987|gb|AFIZ01000020.1| 15084 14518 -3 - 567 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.65907.peg.1821 CDS gi|333351987|gb|AFIZ01000020.1| 16199 15093 -2 - 1107 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65907.peg.1822 CDS gi|333351987|gb|AFIZ01000020.1| 18162 16276 -3 - 1887 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65907.peg.1823 CDS gi|333351987|gb|AFIZ01000020.1| 18225 19154 3 + 930 hypothetical protein - none -
fig|6666666.65907.peg.1824 CDS gi|333351987|gb|AFIZ01000020.1| 19472 19182 -2 - 291 hypothetical protein - none -
fig|6666666.65907.peg.1825 CDS gi|333351987|gb|AFIZ01000020.1| 20953 19523 -1 - 1431 hypothetical protein - none -
fig|6666666.65907.peg.1826 CDS gi|333351987|gb|AFIZ01000020.1| 21201 20950 -3 - 252 hypothetical protein - none -
fig|6666666.65907.peg.1827 CDS gi|333351988|gb|AFIZ01000019.1| 84 881 3 + 798 hypothetical protein - none -
fig|6666666.65907.peg.1828 CDS gi|333351988|gb|AFIZ01000019.1| 894 1109 3 + 216 hypothetical protein - none -
fig|6666666.65907.peg.1829 CDS gi|333351988|gb|AFIZ01000019.1| 1116 2393 3 + 1278 hypothetical protein - none -
fig|6666666.65907.peg.1830 CDS gi|333351988|gb|AFIZ01000019.1| 3642 2380 -3 - 1263 Cyanate MFS transporter - none -
fig|6666666.65907.peg.1831 CDS gi|333351988|gb|AFIZ01000019.1| 3693 5477 3 + 1785 putative integral membrane protein - none -
fig|6666666.65907.peg.1832 CDS gi|333351988|gb|AFIZ01000019.1| 6340 5489 -1 - 852 putative membrane protein - none -
fig|6666666.65907.peg.1833 CDS gi|333351988|gb|AFIZ01000019.1| 7290 6400 -3 - 891 hypothetical protein - none -
fig|6666666.65907.peg.1834 CDS gi|333351988|gb|AFIZ01000019.1| 8955 7405 -3 - 1551 hypothetical protein - none -
fig|6666666.65907.peg.1835 CDS gi|333351988|gb|AFIZ01000019.1| 9747 9019 -3 - 729 hypothetical protein - none -
fig|6666666.65907.peg.1836 CDS gi|333351988|gb|AFIZ01000019.1| 11065 9932 -1 - 1134 hypothetical protein - none -
fig|6666666.65907.peg.1837 CDS gi|333351988|gb|AFIZ01000019.1| 11426 11070 -2 - 357 hypothetical protein - none -
fig|6666666.65907.peg.1838 CDS gi|333351988|gb|AFIZ01000019.1| 14028 11446 -3 - 2583 hypothetical protein - none -
fig|6666666.65907.peg.1839 CDS gi|333351988|gb|AFIZ01000019.1| 14723 14028 -2 - 696 hypothetical protein - none -
fig|6666666.65907.peg.1840 CDS gi|333351988|gb|AFIZ01000019.1| 15947 15180 -2 - 768 Inositol transport system ATP-binding protein - none -
fig|6666666.65907.peg.1841 CDS gi|333351988|gb|AFIZ01000019.1| 16990 15944 -1 - 1047 Inositol transport system permease protein - none -
fig|6666666.65907.peg.1842 CDS gi|333351988|gb|AFIZ01000019.1| 17994 16987 -3 - 1008 Inositol transport system sugar-binding protein - none -
fig|6666666.65907.peg.1843 CDS gi|333351988|gb|AFIZ01000019.1| 18307 18960 1 + 654 hypothetical protein - none -
fig|6666666.65907.peg.1844 CDS gi|333351988|gb|AFIZ01000019.1| 19082 19531 2 + 450 hypothetical protein - none -
fig|6666666.65907.peg.1845 CDS gi|333351988|gb|AFIZ01000019.1| 20941 19586 -1 - 1356 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.65907.peg.1846 CDS gi|333351988|gb|AFIZ01000019.1| 20982 22268 3 + 1287 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.1847 CDS gi|333351988|gb|AFIZ01000019.1| 23397 22279 -3 - 1119 putative membrane protein - none -
fig|6666666.65907.peg.1848 CDS gi|333351988|gb|AFIZ01000019.1| 23790 24746 3 + 957 hypothetical protein - none -
fig|6666666.65907.peg.1849 CDS gi|333351988|gb|AFIZ01000019.1| 24812 25684 2 + 873 hypothetical protein - none -
fig|6666666.65907.peg.1850 CDS gi|333351988|gb|AFIZ01000019.1| 25810 26826 1 + 1017 hypothetical protein - none -
fig|6666666.65907.peg.1851 CDS gi|333351988|gb|AFIZ01000019.1| 27846 26842 -3 - 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65907.peg.1852 CDS gi|333351988|gb|AFIZ01000019.1| 28759 27848 -1 - 912 LysR-family transcriptional regulator - none -
fig|6666666.65907.peg.1853 CDS gi|333351988|gb|AFIZ01000019.1| 28849 29871 1 + 1023 Putative membrane protein - none -
fig|6666666.65907.peg.1854 CDS gi|333351988|gb|AFIZ01000019.1| 30840 29845 -3 - 996 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65907.peg.1855 CDS gi|333351988|gb|AFIZ01000019.1| 32122 30851 -1 - 1272 putative transport protein - none -
fig|6666666.65907.peg.1856 CDS gi|333351988|gb|AFIZ01000019.1| 32296 34539 1 + 2244 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.65907.peg.1857 CDS gi|333351988|gb|AFIZ01000019.1| 34888 36228 1 + 1341 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65907.peg.1858 CDS gi|333351988|gb|AFIZ01000019.1| 36275 37432 2 + 1158 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65907.peg.1859 CDS gi|333351988|gb|AFIZ01000019.1| 37654 38454 1 + 801 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.1860 CDS gi|333351988|gb|AFIZ01000019.1| 39467 38634 -2 - 834 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65907.peg.1861 CDS gi|333351988|gb|AFIZ01000019.1| 40612 39491 -1 - 1122 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.65907.peg.1862 CDS gi|333351988|gb|AFIZ01000019.1| 41733 40609 -3 - 1125 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65907.peg.1863 CDS gi|333351988|gb|AFIZ01000019.1| 41875 42840 1 + 966 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65907.peg.1864 CDS gi|333351988|gb|AFIZ01000019.1| 43775 42909 -2 - 867 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65907.peg.1865 CDS gi|333351988|gb|AFIZ01000019.1| 44595 43768 -3 - 828 hypothetical protein - none -
fig|6666666.65907.peg.1866 CDS gi|333351988|gb|AFIZ01000019.1| 45144 44683 -3 - 462 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65907.peg.1867 CDS gi|333351988|gb|AFIZ01000019.1| 46224 45211 -3 - 1014 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65907.peg.1868 CDS gi|333351988|gb|AFIZ01000019.1| 46911 46306 -3 - 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.65907.peg.1869 CDS gi|333351988|gb|AFIZ01000019.1| 47278 46934 -1 - 345 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.65907.peg.1870 CDS gi|333351988|gb|AFIZ01000019.1| 47710 47342 -1 - 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.65907.peg.1871 CDS gi|333351988|gb|AFIZ01000019.1| 48065 47847 -2 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65907.peg.1872 CDS gi|333351988|gb|AFIZ01000019.1| 49071 48268 -3 - 804 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65907.peg.1873 CDS gi|333351988|gb|AFIZ01000019.1| 49632 49087 -3 - 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65907.peg.1874 CDS gi|333351988|gb|AFIZ01000019.1| 50963 49629 -2 - 1335 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65907.peg.1875 CDS gi|333351988|gb|AFIZ01000019.1| 51693 51241 -3 - 453 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65907.peg.1876 CDS gi|333351988|gb|AFIZ01000019.1| 51883 51698 -1 - 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65907.peg.1877 CDS gi|333351988|gb|AFIZ01000019.1| 52528 51887 -1 - 642 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.65907.peg.1878 CDS gi|333351988|gb|AFIZ01000019.1| 52967 52566 -2 - 402 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65907.peg.1879 CDS gi|333351988|gb|AFIZ01000019.1| 53479 52967 -1 - 513 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65907.peg.1880 CDS gi|333351988|gb|AFIZ01000019.1| 53920 53519 -1 - 402 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.65907.peg.1881 CDS gi|333351988|gb|AFIZ01000019.1| 54294 55796 3 + 1503 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1882 CDS gi|333351988|gb|AFIZ01000019.1| 55810 56535 1 + 726 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.1883 CDS gi|333351988|gb|AFIZ01000019.1| 56567 57715 2 + 1149 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.1884 CDS gi|333351988|gb|AFIZ01000019.1| 57737 58075 2 + 339 hypothetical protein - none -
fig|6666666.65907.peg.1885 CDS gi|333351988|gb|AFIZ01000019.1| 58215 60506 3 + 2292 Putative formate dehydrogenase oxidoreductase protein Formate hydrogenase
fig|6666666.65907.peg.1886 CDS gi|333351988|gb|AFIZ01000019.1| 60509 61510 2 + 1002 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.65907.peg.1887 CDS gi|333351988|gb|AFIZ01000019.1| 62815 62081 -1 - 735 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65907.peg.1888 CDS gi|333351988|gb|AFIZ01000019.1| 64928 62826 -2 - 2103 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65907.peg.1889 CDS gi|333351988|gb|AFIZ01000019.1| 64977 65903 3 + 927 Alpha/beta hydrolase fold precursor - none -
fig|6666666.65907.peg.1890 CDS gi|333351988|gb|AFIZ01000019.1| 68353 65939 -1 - 2415 Phosphoenolpyruvate synthase (EC 2.7.9.2) A Hypothetical that Clusters with PEP Synthase;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65907.peg.1891 CDS gi|333351988|gb|AFIZ01000019.1| 69194 68367 -2 - 828 FIG137360: hypothetical protein A Hypothetical that Clusters with PEP Synthase
fig|6666666.65907.peg.1892 CDS gi|333351988|gb|AFIZ01000019.1| 69864 69310 -3 - 555 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.65907.peg.1893 CDS gi|333351988|gb|AFIZ01000019.1| 70304 69861 -2 - 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65907.peg.1894 CDS gi|333351988|gb|AFIZ01000019.1| 70820 70539 -2 - 282 hypothetical protein - none -
fig|6666666.65907.peg.1895 CDS gi|333351988|gb|AFIZ01000019.1| 71120 70836 -2 - 285 hypothetical protein - none -
fig|6666666.65907.peg.1896 CDS gi|333351988|gb|AFIZ01000019.1| 72006 71293 -3 - 714 Lactate-responsive regulator LldR in Actinobacteria, GntR family Lactate utilization
fig|6666666.65907.peg.1897 CDS gi|333351988|gb|AFIZ01000019.1| 73213 72110 -1 - 1104 hypothetical protein - none -
fig|6666666.65907.peg.1898 CDS gi|333351988|gb|AFIZ01000019.1| 76524 73222 -3 - 3303 FtsK/SpoIIIE family protein - none -
fig|6666666.65907.peg.1899 CDS gi|333351988|gb|AFIZ01000019.1| 76703 77911 2 + 1209 hypothetical protein - none -
fig|6666666.65907.peg.1900 CDS gi|333351988|gb|AFIZ01000019.1| 77908 79011 1 + 1104 serine protease, subtilase family - none -
fig|6666666.65907.peg.1901 CDS gi|333351988|gb|AFIZ01000019.1| 80227 79040 -1 - 1188 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.1902 CDS gi|333351988|gb|AFIZ01000019.1| 80376 81224 3 + 849 hypothetical protein - none -
fig|6666666.65907.peg.1903 CDS gi|333351988|gb|AFIZ01000019.1| 81306 82487 3 + 1182 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.65907.peg.1904 CDS gi|333351988|gb|AFIZ01000019.1| 83517 82495 -3 - 1023 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65907.peg.1905 CDS gi|333351988|gb|AFIZ01000019.1| 84607 83621 -1 - 987 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.65907.peg.1906 CDS gi|333351988|gb|AFIZ01000019.1| 85424 84612 -2 - 813 Sulfate transport system permease protein CysW Cysteine Biosynthesis
fig|6666666.65907.peg.1907 CDS gi|333351988|gb|AFIZ01000019.1| 86239 85421 -1 - 819 Sulfate transport system permease protein CysT Cysteine Biosynthesis
fig|6666666.65907.peg.1908 CDS gi|333351988|gb|AFIZ01000019.1| 87405 86239 -3 - 1167 Sulfate and thiosulfate binding protein CysP Cysteine Biosynthesis
fig|6666666.65907.peg.1909 CDS gi|333351988|gb|AFIZ01000019.1| 87726 89078 3 + 1353 Drug resistance transporter EmrB/QacA subfamily - none -
fig|6666666.65907.peg.1910 CDS gi|333351988|gb|AFIZ01000019.1| 89071 89967 1 + 897 hypothetical protein - none -
fig|6666666.65907.peg.1911 CDS gi|333351988|gb|AFIZ01000019.1| 90883 89927 -1 - 957 luciferase family protein - none -
fig|6666666.65907.peg.1912 CDS gi|333351988|gb|AFIZ01000019.1| 91313 90885 -2 - 429 hypothetical membrane protein - none -
fig|6666666.65907.peg.1913 CDS gi|333351988|gb|AFIZ01000019.1| 92181 91324 -3 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65907.peg.1914 CDS gi|333351988|gb|AFIZ01000019.1| 92710 92213 -1 - 498 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65907.peg.1915 CDS gi|333351988|gb|AFIZ01000019.1| 94050 92713 -3 - 1338 aspartyl aminopeptidase - none -
fig|6666666.65907.peg.1916 CDS gi|333351988|gb|AFIZ01000019.1| 95785 94244 -1 - 1542 hypothetical protein - none -
fig|6666666.65907.peg.1917 CDS gi|333351988|gb|AFIZ01000019.1| 96799 96107 -1 - 693 hypothetical protein - none -
fig|6666666.65907.peg.1918 CDS gi|333351988|gb|AFIZ01000019.1| 98734 96911 -1 - 1824 Acylamino-acid-releasing enzyme - none -
fig|6666666.65907.peg.1919 CDS gi|333351988|gb|AFIZ01000019.1| 100090 98747 -1 - 1344 Protein containing domains DUF404, DUF407 - none -
fig|6666666.65907.peg.1920 CDS gi|333351988|gb|AFIZ01000019.1| 100153 101550 1 + 1398 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.65907.peg.1921 CDS gi|333351988|gb|AFIZ01000019.1| 101571 102911 3 + 1341 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.65907.peg.1922 CDS gi|333351988|gb|AFIZ01000019.1| 103892 102933 -2 - 960 putative hydrolase - none -
fig|6666666.65907.peg.1923 CDS gi|333351988|gb|AFIZ01000019.1| 104112 105470 3 + 1359 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65907.peg.1924 CDS gi|333351988|gb|AFIZ01000019.1| 105870 105628 -3 - 243 hypothetical protein - none -
fig|6666666.65907.peg.1925 CDS gi|333351988|gb|AFIZ01000019.1| 106241 105837 -2 - 405 hypothetical protein - none -
fig|6666666.65907.peg.1926 CDS gi|333351988|gb|AFIZ01000019.1| 106575 106276 -3 - 300 hypothetical protein - none -
fig|6666666.65907.peg.1927 CDS gi|333351988|gb|AFIZ01000019.1| 106709 107695 2 + 987 FIG00545148: hypothetical protein - none -
fig|6666666.65907.peg.1928 CDS gi|333351988|gb|AFIZ01000019.1| 110926 107726 -1 - 3201 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65907.peg.1929 CDS gi|333351988|gb|AFIZ01000019.1| 111060 111959 3 + 900 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.1930 CDS gi|333351988|gb|AFIZ01000019.1| 111966 113015 3 + 1050 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.1931 CDS gi|333351988|gb|AFIZ01000019.1| 113012 113710 2 + 699 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.1932 CDS gi|333351988|gb|AFIZ01000019.1| 113722 114405 1 + 684 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.65907.peg.1933 CDS gi|333351988|gb|AFIZ01000019.1| 115579 114392 -1 - 1188 FIG00546271: hypothetical protein - none -
fig|6666666.65907.peg.1934 CDS gi|333351988|gb|AFIZ01000019.1| 115661 116248 2 + 588 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.1935 CDS gi|333351988|gb|AFIZ01000019.1| 116270 116923 2 + 654 oxidoreductase ylbE - none -
fig|6666666.65907.peg.1936 CDS gi|333351988|gb|AFIZ01000019.1| 117800 116931 -2 - 870 DNA polymerase-like protein PA0670 - none -
fig|6666666.65907.peg.1937 CDS gi|333351989|gb|AFIZ01000018.1| 108 1106 3 + 999 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.1938 CDS gi|333351989|gb|AFIZ01000018.1| 1365 2831 3 + 1467 Phytoene dehydrogenase and related proteins - none -
fig|6666666.65907.peg.1939 CDS gi|333351989|gb|AFIZ01000018.1| 2828 4090 2 + 1263 hypothetical protein - none -
fig|6666666.65907.peg.1940 CDS gi|333351989|gb|AFIZ01000018.1| 4115 4810 2 + 696 hypothetical protein - none -
fig|6666666.65907.peg.1941 CDS gi|333351989|gb|AFIZ01000018.1| 6030 4828 -3 - 1203 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65907.peg.1942 CDS gi|333351989|gb|AFIZ01000018.1| 6128 6949 2 + 822 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.65907.peg.1943 CDS gi|333351989|gb|AFIZ01000018.1| 6946 8541 1 + 1596 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65907.peg.1944 CDS gi|333351989|gb|AFIZ01000018.1| 8541 10205 3 + 1665 hypothetical protein - none -
fig|6666666.65907.peg.1945 CDS gi|333351989|gb|AFIZ01000018.1| 10883 10236 -2 - 648 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.65907.peg.1946 CDS gi|333351989|gb|AFIZ01000018.1| 10945 11247 1 + 303 hypothetical protein - none -
fig|6666666.65907.peg.1947 CDS gi|333351990|gb|AFIZ01000017.1| 3457 1928 -1 - 1530 hypothetical protein - none -
fig|6666666.65907.peg.1948 CDS gi|333351990|gb|AFIZ01000017.1| 3714 3454 -3 - 261 hypothetical protein - none -
fig|6666666.65907.peg.1949 CDS gi|333351990|gb|AFIZ01000017.1| 4121 3843 -2 - 279 hypothetical protein - none -
fig|6666666.65907.peg.1950 CDS gi|333351990|gb|AFIZ01000017.1| 5035 4226 -1 - 810 hypothetical protein - none -
fig|6666666.65907.peg.1951 CDS gi|333351990|gb|AFIZ01000017.1| 6157 5435 -1 - 723 Hemoglobin, heme-dependent two component system response regulator ChrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.1952 CDS gi|333351990|gb|AFIZ01000017.1| 7419 6154 -3 - 1266 hypothetical protein - none -
fig|6666666.65907.peg.1953 CDS gi|333351990|gb|AFIZ01000017.1| 7482 8561 3 + 1080 ATP binding protein of ABC transporter for sugars - none -
fig|6666666.65907.peg.1954 CDS gi|333351990|gb|AFIZ01000017.1| 8731 9987 1 + 1257 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis
fig|6666666.65907.peg.1955 CDS gi|333351990|gb|AFIZ01000017.1| 10026 11051 3 + 1026 Maltose/maltodextrin ABC transporter, permease protein MalF - none -
fig|6666666.65907.peg.1956 CDS gi|333351990|gb|AFIZ01000017.1| 11048 11890 2 + 843 Maltose/maltodextrin ABC transporter, permease protein MalG - none -
fig|6666666.65907.peg.1957 CDS gi|333351990|gb|AFIZ01000017.1| 11890 12114 1 + 225 hypothetical protein - none -
fig|6666666.65907.peg.1958 CDS gi|333351990|gb|AFIZ01000017.1| 13677 12637 -3 - 1041 hypothetical protein - none -
fig|6666666.65907.peg.1959 CDS gi|333351990|gb|AFIZ01000017.1| 14214 13693 -3 - 522 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1960 CDS gi|333351990|gb|AFIZ01000017.1| 15524 14220 -2 - 1305 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65907.peg.1961 CDS gi|333351990|gb|AFIZ01000017.1| 16082 15531 -2 - 552 hypothetical membrane protein - none -
fig|6666666.65907.peg.1962 CDS gi|333351990|gb|AFIZ01000017.1| 17012 16095 -2 - 918 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.65907.peg.1963 CDS gi|333351990|gb|AFIZ01000017.1| 17070 18677 3 + 1608 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65907.peg.1964 CDS gi|333351990|gb|AFIZ01000017.1| 18688 18960 1 + 273 hypothetical protein - none -
fig|6666666.65907.peg.1965 CDS gi|333351990|gb|AFIZ01000017.1| 18953 19609 2 + 657 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65907.peg.1966 CDS gi|333351990|gb|AFIZ01000017.1| 19715 20608 2 + 894 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65907.peg.1967 CDS gi|333351990|gb|AFIZ01000017.1| 20724 22550 3 + 1827 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.1968 CDS gi|333351990|gb|AFIZ01000017.1| 22553 24115 2 + 1563 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.1969 CDS gi|333351990|gb|AFIZ01000017.1| 24238 25734 1 + 1497 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.1970 CDS gi|333351990|gb|AFIZ01000017.1| 25786 26655 1 + 870 hypothetical protein - none -
fig|6666666.65907.peg.1971 CDS gi|333351991|gb|AFIZ01000016.1| 1410 1276 -3 - 135 hypothetical protein - none -
fig|6666666.65907.peg.1972 CDS gi|333351992|gb|AFIZ01000015.1| 304 1071 1 + 768 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65907.peg.1973 CDS gi|333351992|gb|AFIZ01000015.1| 1068 2093 3 + 1026 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65907.peg.1974 CDS gi|333351992|gb|AFIZ01000015.1| 2095 4209 1 + 2115 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.65907.peg.1975 CDS gi|333351992|gb|AFIZ01000015.1| 4288 4980 1 + 693 hypothetical protein - none -
fig|6666666.65907.peg.1976 CDS gi|333351992|gb|AFIZ01000015.1| 5010 5657 3 + 648 hypothetical protein - none -
fig|6666666.65907.peg.1977 CDS gi|333351992|gb|AFIZ01000015.1| 6523 5675 -1 - 849 Putative DNA-binding protein - none -
fig|6666666.65907.peg.1978 CDS gi|333351992|gb|AFIZ01000015.1| 7069 6533 -1 - 537 ThiJ/PfpI family protein - none -
fig|6666666.65907.peg.1979 CDS gi|333351992|gb|AFIZ01000015.1| 7985 7128 -2 - 858 short chain dehydrogenase - none -
fig|6666666.65907.peg.1980 CDS gi|333351992|gb|AFIZ01000015.1| 8495 8070 -2 - 426 hypothetical protein - none -
fig|6666666.65907.peg.1981 CDS gi|333351992|gb|AFIZ01000015.1| 12373 9275 -1 - 3099 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65907.peg.1982 CDS gi|333351992|gb|AFIZ01000015.1| 12444 13001 3 + 558 FIG129854: hypothetical protein - none -
fig|6666666.65907.peg.1983 CDS gi|333351992|gb|AFIZ01000015.1| 14167 13013 -1 - 1155 Lon-like protease with PDZ domain - none -
fig|6666666.65907.peg.1984 CDS gi|333351992|gb|AFIZ01000015.1| 14296 15783 1 + 1488 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65907.peg.1985 CDS gi|333351992|gb|AFIZ01000015.1| 17033 15825 -2 - 1209 Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1 Glutathionylspermidine and Trypanothione
fig|6666666.65907.peg.1986 CDS gi|333351992|gb|AFIZ01000015.1| 17521 17033 -1 - 489 hypothetical protein - none -
fig|6666666.65907.peg.1987 CDS gi|333351992|gb|AFIZ01000015.1| 18101 17544 -2 - 558 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65907.peg.1988 CDS gi|333351992|gb|AFIZ01000015.1| 18254 19156 2 + 903 hypothetical protein - none -
fig|6666666.65907.peg.1989 CDS gi|333351992|gb|AFIZ01000015.1| 21721 19535 -1 - 2187 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65907.peg.1990 CDS gi|333351992|gb|AFIZ01000015.1| 22800 21718 -3 - 1083 Potassium channel protein Potassium homeostasis
fig|6666666.65907.peg.1991 CDS gi|333351992|gb|AFIZ01000015.1| 26488 22793 -1 - 3696 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65907.peg.1992 CDS gi|333351992|gb|AFIZ01000015.1| 29866 26489 -1 - 3378 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65907.peg.1993 CDS gi|333351992|gb|AFIZ01000015.1| 30906 29863 -3 - 1044 FIG00544868: hypothetical protein - none -
fig|6666666.65907.peg.1994 CDS gi|333351992|gb|AFIZ01000015.1| 31944 30922 -3 - 1023 hypothetical protein - none -
fig|6666666.65907.peg.1995 CDS gi|333351992|gb|AFIZ01000015.1| 32224 32000 -1 - 225 hypothetical protein - none -
fig|6666666.65907.peg.1996 CDS gi|333351992|gb|AFIZ01000015.1| 32353 33702 1 + 1350 putative ATP-dependent RNA helicase - none -
fig|6666666.65907.peg.1997 CDS gi|333351992|gb|AFIZ01000015.1| 33699 35015 3 + 1317 probable membrane protein - none -
fig|6666666.65907.peg.1998 CDS gi|333351992|gb|AFIZ01000015.1| 35748 35272 -3 - 477 hypothetical protein - none -
fig|6666666.65907.peg.1999 CDS gi|333351992|gb|AFIZ01000015.1| 36240 36503 3 + 264 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65907.peg.2000 CDS gi|333351992|gb|AFIZ01000015.1| 37218 36889 -3 - 330 possible anti-sigma factor - none -
fig|6666666.65907.peg.2001 CDS gi|333351992|gb|AFIZ01000015.1| 37911 37225 -3 - 687 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65907.peg.2002 CDS gi|333351992|gb|AFIZ01000015.1| 38666 37998 -2 - 669 hypothetical protein - none -
fig|6666666.65907.peg.2003 CDS gi|333351992|gb|AFIZ01000015.1| 38703 39998 3 + 1296 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65907.peg.2004 CDS gi|333351992|gb|AFIZ01000015.1| 40007 41026 2 + 1020 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65907.peg.2005 CDS gi|333351992|gb|AFIZ01000015.1| 41127 41276 3 + 150 hypothetical protein - none -
fig|6666666.65907.peg.2006 CDS gi|333351992|gb|AFIZ01000015.1| 41830 41300 -1 - 531 hypothetical protein - none -
fig|6666666.65907.peg.2007 CDS gi|333351992|gb|AFIZ01000015.1| 42252 41833 -3 - 420 FIG00996758: hypothetical protein - none -
fig|6666666.65907.peg.2008 CDS gi|333351992|gb|AFIZ01000015.1| 42300 42773 3 + 474 hypothetical protein - none -
fig|6666666.65907.peg.2009 CDS gi|333351992|gb|AFIZ01000015.1| 45432 42835 -3 - 2598 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65907.peg.2010 CDS gi|333351992|gb|AFIZ01000015.1| 46373 45696 -2 - 678 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65907.peg.2011 CDS gi|333351992|gb|AFIZ01000015.1| 47328 46636 -3 - 693 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.65907.peg.2012 CDS gi|333351992|gb|AFIZ01000015.1| 49124 47346 -2 - 1779 LpqB - none -
fig|6666666.65907.peg.2013 CDS gi|333351992|gb|AFIZ01000015.1| 51480 49102 -3 - 2379 Sensor histidine kinase MtrB (EC 2.7.13.3) - none -
fig|6666666.65907.peg.2014 CDS gi|333351992|gb|AFIZ01000015.1| 52169 51489 -2 - 681 two-component system response regulator - none -
fig|6666666.65907.peg.2015 CDS gi|333351992|gb|AFIZ01000015.1| 52938 52252 -3 - 687 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.65907.peg.2016 CDS gi|333351992|gb|AFIZ01000015.1| 54456 52951 -3 - 1506 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.2017 CDS gi|333351992|gb|AFIZ01000015.1| 55008 54637 -3 - 372 hypothetical protein - none -
fig|6666666.65907.peg.2018 CDS gi|333351992|gb|AFIZ01000015.1| 55300 56205 1 + 906 hypothetical protein - none -
fig|6666666.65907.peg.2019 CDS gi|333351992|gb|AFIZ01000015.1| 57494 56286 -2 - 1209 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65907.peg.2020 CDS gi|333351992|gb|AFIZ01000015.1| 58899 57508 -3 - 1392 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65907.peg.2021 CDS gi|333351992|gb|AFIZ01000015.1| 59389 58961 -1 - 429 hypothetical protein - none -
fig|6666666.65907.peg.2022 CDS gi|333351992|gb|AFIZ01000015.1| 59506 60015 1 + 510 hypothetical protein - none -
fig|6666666.65907.peg.2023 CDS gi|333351992|gb|AFIZ01000015.1| 60412 60032 -1 - 381 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65907.peg.2024 CDS gi|333351992|gb|AFIZ01000015.1| 61849 60752 -1 - 1098 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65907.peg.2025 CDS gi|333351992|gb|AFIZ01000015.1| 62914 62000 -1 - 915 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65907.peg.2026 CDS gi|333351992|gb|AFIZ01000015.1| 63657 62917 -3 - 741 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65907.peg.2027 CDS gi|333351992|gb|AFIZ01000015.1| 63889 63671 -1 - 219 hypothetical protein - none -
fig|6666666.65907.peg.2028 CDS gi|333351992|gb|AFIZ01000015.1| 63863 65659 2 + 1797 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65907.peg.2029 CDS gi|333351992|gb|AFIZ01000015.1| 67505 65697 -2 - 1809 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65907.peg.2030 CDS gi|333351992|gb|AFIZ01000015.1| 67594 68208 1 + 615 hypothetical protein - none -
fig|6666666.65907.peg.2031 CDS gi|333351992|gb|AFIZ01000015.1| 68219 68923 2 + 705 hypothetical protein - none -
fig|6666666.65907.peg.2032 CDS gi|333351992|gb|AFIZ01000015.1| 69593 68931 -2 - 663 hypothetical protein - none -
fig|6666666.65907.peg.2033 CDS gi|333351992|gb|AFIZ01000015.1| 70391 69615 -2 - 777 Putative ABc transport system integral membrane protein - none -
fig|6666666.65907.peg.2034 CDS gi|333351992|gb|AFIZ01000015.1| 71362 70397 -1 - 966 putative ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.2035 CDS gi|333351992|gb|AFIZ01000015.1| 72879 72331 -3 - 549 Mobile element protein - none -
fig|6666666.65907.peg.2036 CDS gi|333351993|gb|AFIZ01000014.1| 3153 1471 -3 - 1683 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Serine-glyoxylate cycle
fig|6666666.65907.peg.2037 CDS gi|333351993|gb|AFIZ01000014.1| 3444 4061 3 + 618 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.2038 CDS gi|333351993|gb|AFIZ01000014.1| 4058 5743 2 + 1686 Phytoene dehydrogenase and related proteins - none -
fig|6666666.65907.peg.2039 CDS gi|333351993|gb|AFIZ01000014.1| 6774 7166 3 + 393 hypothetical protein - none -
fig|6666666.65907.peg.2040 CDS gi|333351993|gb|AFIZ01000014.1| 8153 7185 -2 - 969 alcohol dehydrogenase - none -
fig|6666666.65907.peg.2041 CDS gi|333351993|gb|AFIZ01000014.1| 8288 9109 2 + 822 2-keto-4-pentenoate hydratase (EC 4.2.1.80) - none -
fig|6666666.65907.peg.2042 CDS gi|333351993|gb|AFIZ01000014.1| 9151 10554 1 + 1404 Large subunit naph/bph dioxygenase - none -
fig|6666666.65907.peg.2043 CDS gi|333351993|gb|AFIZ01000014.1| 10551 10904 3 + 354 3-phenylpropionate dioxygenase ferredoxin subunit Aromatic dioxygenase mess;
Dioxygenases (EC 1.14.12.-);
Phenylpropionate Degradation
fig|6666666.65907.peg.2044 CDS gi|333351993|gb|AFIZ01000014.1| 10906 12210 1 + 1305 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.65907.peg.2045 CDS gi|333351993|gb|AFIZ01000014.1| 12216 12815 3 + 600 3-phenylpropionate dioxygenase, beta subunit (EC 1.14.12.19) Aromatic dioxygenase mess;
Dioxygenases (EC 1.14.12.-);
Flavohaemoglobin;
Phenylpropionate Degradation
fig|6666666.65907.peg.2046 CDS gi|333351993|gb|AFIZ01000014.1| 12844 13713 1 + 870 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) - none -
fig|6666666.65907.peg.2047 CDS gi|333351993|gb|AFIZ01000014.1| 13713 14576 3 + 864 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-) Phenylpropionate Degradation
fig|6666666.65907.peg.2048 CDS gi|333351993|gb|AFIZ01000014.1| 14573 14932 2 + 360 hypothetical protein - none -
fig|6666666.65907.peg.2049 CDS gi|333351993|gb|AFIZ01000014.1| 14935 15918 1 + 984 Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol - none -
fig|6666666.65907.peg.2050 CDS gi|333351993|gb|AFIZ01000014.1| 15915 16925 3 + 1011 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-) - none -
fig|6666666.65907.peg.2051 CDS gi|333351993|gb|AFIZ01000014.1| 17062 18633 1 + 1572 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.2052 CDS gi|333351993|gb|AFIZ01000014.1| 18689 19684 2 + 996 Catechol 2,3-dioxygenase (EC 1.13.11.2) - none -
fig|6666666.65907.peg.2053 CDS gi|333351993|gb|AFIZ01000014.1| 20230 19730 -1 - 501 hypothetical protein - none -
fig|6666666.65907.peg.2054 CDS gi|333351993|gb|AFIZ01000014.1| 20291 21319 2 + 1029 Strictosidine synthase precursor (EC 4.3.3.2) - none -
fig|6666666.65907.peg.2055 CDS gi|333351993|gb|AFIZ01000014.1| 21881 21345 -2 - 537 hypothetical protein - none -
fig|6666666.65907.peg.2056 CDS gi|333351993|gb|AFIZ01000014.1| 23488 21902 -1 - 1587 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65907.peg.2057 CDS gi|333351993|gb|AFIZ01000014.1| 24161 23481 -2 - 681 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.65907.peg.2058 CDS gi|333351993|gb|AFIZ01000014.1| 26101 24173 -1 - 1929 hypothetical protein - none -
fig|6666666.65907.peg.2059 CDS gi|333351993|gb|AFIZ01000014.1| 26519 27262 2 + 744 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65907.peg.2060 CDS gi|333351993|gb|AFIZ01000014.1| 30491 27696 -2 - 2796 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65907.peg.2061 CDS gi|333351993|gb|AFIZ01000014.1| 30580 30870 1 + 291 Chorismate mutase I (EC 5.4.99.5) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65907.peg.2062 CDS gi|333351993|gb|AFIZ01000014.1| 31556 30906 -2 - 651 hypothetical protein - none -
fig|6666666.65907.peg.2063 CDS gi|333351994|gb|AFIZ01000013.1| 849 64 -3 - 786 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.2064 CDS gi|333351994|gb|AFIZ01000013.1| 1886 870 -2 - 1017 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.2065 CDS gi|333351994|gb|AFIZ01000013.1| 2494 1904 -1 - 591 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.65907.peg.2066 CDS gi|333351994|gb|AFIZ01000013.1| 3793 2498 -1 - 1296 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.65907.peg.2067 CDS gi|333351994|gb|AFIZ01000013.1| 3905 4819 2 + 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65907.peg.2068 CDS gi|333351994|gb|AFIZ01000013.1| 5588 4833 -2 - 756 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65907.peg.2069 CDS gi|333351994|gb|AFIZ01000013.1| 6037 5585 -1 - 453 hypothetical protein - none -
fig|6666666.65907.peg.2070 CDS gi|333351994|gb|AFIZ01000013.1| 6975 6034 -3 - 942 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65907.peg.2071 CDS gi|333351994|gb|AFIZ01000013.1| 7052 7504 2 + 453 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.2072 CDS gi|333351994|gb|AFIZ01000013.1| 7565 8089 2 + 525 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65907.peg.2073 CDS gi|333351994|gb|AFIZ01000013.1| 9385 8504 -1 - 882 FIG00543890: hypothetical protein - none -
fig|6666666.65907.peg.2074 CDS gi|333351994|gb|AFIZ01000013.1| 9559 11151 1 + 1593 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.2075 CDS gi|333351994|gb|AFIZ01000013.1| 11169 11951 3 + 783 SAM-dependent methyltransferase - none -
fig|6666666.65907.peg.2076 CDS gi|333351994|gb|AFIZ01000013.1| 12640 11960 -1 - 681 short chain dehydrogenase - none -
fig|6666666.65907.peg.2077 CDS gi|333351994|gb|AFIZ01000013.1| 12704 12946 2 + 243 hypothetical protein - none -
fig|6666666.65907.peg.2078 CDS gi|333351994|gb|AFIZ01000013.1| 13033 13656 1 + 624 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65907.peg.2079 CDS gi|333351994|gb|AFIZ01000013.1| 14232 13669 -3 - 564 NADPH-dependent FMN reductase - none -
fig|6666666.65907.peg.2080 CDS gi|333351994|gb|AFIZ01000013.1| 14508 15572 3 + 1065 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.2081 CDS gi|333351994|gb|AFIZ01000013.1| 15589 16776 1 + 1188 Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.2082 CDS gi|333351994|gb|AFIZ01000013.1| 17244 16780 -3 - 465 hypothetical protein - none -
fig|6666666.65907.peg.2083 CDS gi|333351994|gb|AFIZ01000013.1| 18038 17394 -2 - 645 Transcriptional regulator, GntR family - none -
fig|6666666.65907.peg.2084 CDS gi|333351994|gb|AFIZ01000013.1| 18235 19968 1 + 1734 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65907.peg.2085 CDS gi|333351994|gb|AFIZ01000013.1| 19990 20790 1 + 801 hypothetical protein - none -
fig|6666666.65907.peg.2086 CDS gi|333351994|gb|AFIZ01000013.1| 21873 21538 -3 - 336 Transcriptional regulator, ArsR family - none -
fig|6666666.65907.peg.2087 CDS gi|333351994|gb|AFIZ01000013.1| 21974 22126 2 + 153 hypothetical protein - none -
fig|6666666.65907.peg.2088 CDS gi|333351994|gb|AFIZ01000013.1| 23196 22153 -3 - 1044 Putative cytoplasmic protein - none -
fig|6666666.65907.peg.2089 CDS gi|333351994|gb|AFIZ01000013.1| 23409 24575 3 + 1167 hypothetical protein - none -
fig|6666666.65907.peg.2090 CDS gi|333351994|gb|AFIZ01000013.1| 25481 24639 -2 - 843 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.65907.peg.2091 CDS gi|333351994|gb|AFIZ01000013.1| 25900 25478 -1 - 423 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein - none -
fig|6666666.65907.peg.2092 CDS gi|333351994|gb|AFIZ01000013.1| 25992 27104 3 + 1113 hypothetical protein - none -
fig|6666666.65907.peg.2093 CDS gi|333351994|gb|AFIZ01000013.1| 27434 27904 2 + 471 hypothetical protein - none -
fig|6666666.65907.peg.2094 CDS gi|333351994|gb|AFIZ01000013.1| 28054 28863 1 + 810 probable siderophore interacting protein - none -
fig|6666666.65907.peg.2095 CDS gi|333351994|gb|AFIZ01000013.1| 28878 29522 3 + 645 hypothetical protein - none -
fig|6666666.65907.peg.2096 CDS gi|333351994|gb|AFIZ01000013.1| 29519 30037 2 + 519 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65907.peg.2097 CDS gi|333351994|gb|AFIZ01000013.1| 30054 30755 3 + 702 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65907.peg.2098 CDS gi|333351994|gb|AFIZ01000013.1| 30766 31305 1 + 540 FIG00512060: hypothetical protein - none -
fig|6666666.65907.peg.2099 CDS gi|333351994|gb|AFIZ01000013.1| 31315 32067 1 + 753 Phosphatidylinositol 3-and 4-kinase family protein - none -
fig|6666666.65907.peg.2100 CDS gi|333351994|gb|AFIZ01000013.1| 32816 32064 -2 - 753 FIG00545943: hypothetical protein - none -
fig|6666666.65907.peg.2101 CDS gi|333351994|gb|AFIZ01000013.1| 33467 32835 -2 - 633 Homoserine/homoserine lactone efflux protein - none -
fig|6666666.65907.peg.2102 CDS gi|333351994|gb|AFIZ01000013.1| 34440 33499 -3 - 942 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65907.peg.2103 CDS gi|333351994|gb|AFIZ01000013.1| 34925 34467 -2 - 459 hypothetical protein - none -
fig|6666666.65907.peg.2104 CDS gi|333351994|gb|AFIZ01000013.1| 34987 35562 1 + 576 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.2105 CDS gi|333351994|gb|AFIZ01000013.1| 35707 36072 1 + 366 hypothetical protein - none -
fig|6666666.65907.peg.2106 CDS gi|333351994|gb|AFIZ01000013.1| 36093 37157 3 + 1065 hypothetical protein - none -
fig|6666666.65907.peg.2107 CDS gi|333351994|gb|AFIZ01000013.1| 38222 37263 -2 - 960 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65907.peg.2108 CDS gi|333351994|gb|AFIZ01000013.1| 38770 38219 -1 - 552 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65907.peg.2109 CDS gi|333351994|gb|AFIZ01000013.1| 39416 38772 -2 - 645 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65907.peg.2110 CDS gi|333351994|gb|AFIZ01000013.1| 40727 39447 -2 - 1281 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.65907.peg.2111 CDS gi|333351994|gb|AFIZ01000013.1| 41479 40814 -1 - 666 FIG00545464: hypothetical protein - none -
fig|6666666.65907.peg.2112 CDS gi|333351994|gb|AFIZ01000013.1| 42150 41476 -3 - 675 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.65907.peg.2113 CDS gi|333351994|gb|AFIZ01000013.1| 42261 43172 3 + 912 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.65907.peg.2114 CDS gi|333351994|gb|AFIZ01000013.1| 43169 43873 2 + 705 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.65907.peg.2115 CDS gi|333351994|gb|AFIZ01000013.1| 45732 44668 -3 - 1065 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65907.peg.2116 CDS gi|333351994|gb|AFIZ01000013.1| 49457 45765 -2 - 3693 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.65907.peg.2117 CDS gi|333351994|gb|AFIZ01000013.1| 49670 51136 2 + 1467 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65907.peg.2118 CDS gi|333351994|gb|AFIZ01000013.1| 51220 52185 1 + 966 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.65907.peg.2119 CDS gi|333351994|gb|AFIZ01000013.1| 52362 53015 3 + 654 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65907.peg.2120 CDS gi|333351994|gb|AFIZ01000013.1| 53094 53663 3 + 570 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65907.peg.2121 CDS gi|333351994|gb|AFIZ01000013.1| 53660 54319 2 + 660 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65907.peg.2122 CDS gi|333351994|gb|AFIZ01000013.1| 54330 55193 3 + 864 Spermidine synthase-like protein - none -
fig|6666666.65907.peg.2123 CDS gi|333351994|gb|AFIZ01000013.1| 55227 56186 3 + 960 Putative oxidoreductase - none -
fig|6666666.65907.peg.2124 CDS gi|333351994|gb|AFIZ01000013.1| 56347 58059 1 + 1713 hypothetical protein - none -
fig|6666666.65907.peg.2125 CDS gi|333351994|gb|AFIZ01000013.1| 59848 58184 -1 - 1665 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4) - none -
fig|6666666.65907.peg.2126 CDS gi|333351994|gb|AFIZ01000013.1| 59962 61635 1 + 1674 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65907.peg.2127 CDS gi|333351994|gb|AFIZ01000013.1| 62675 61632 -2 - 1044 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65907.peg.2128 CDS gi|333351994|gb|AFIZ01000013.1| 63358 62693 -1 - 666 hypothetical membrane protein - none -
fig|6666666.65907.peg.2129 CDS gi|333351994|gb|AFIZ01000013.1| 63461 65860 2 + 2400 FIG00548670: hypothetical protein - none -
fig|6666666.65907.peg.2130 CDS gi|333351994|gb|AFIZ01000013.1| 65853 66524 3 + 672 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.2131 CDS gi|333351994|gb|AFIZ01000013.1| 66819 67580 3 + 762 Riboflavin transporter PnuX Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.65907.peg.2132 CDS gi|333351994|gb|AFIZ01000013.1| 67716 68555 3 + 840 putative integral membrane protein - none -
fig|6666666.65907.peg.2133 CDS gi|333351994|gb|AFIZ01000013.1| 69674 68556 -2 - 1119 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65907.peg.2134 CDS gi|333351994|gb|AFIZ01000013.1| 69815 71683 2 + 1869 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65907.peg.2135 CDS gi|333351994|gb|AFIZ01000013.1| 72616 71690 -1 - 927 FIG00545275: hypothetical protein - none -
fig|6666666.65907.peg.2136 CDS gi|333351994|gb|AFIZ01000013.1| 74080 72641 -1 - 1440 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65907.peg.2137 CDS gi|333351994|gb|AFIZ01000013.1| 74422 74099 -1 - 324 FIG00544339: hypothetical protein - none -
fig|6666666.65907.peg.2138 CDS gi|333351994|gb|AFIZ01000013.1| 76321 74444 -1 - 1878 FIG00544882: hypothetical protein - none -
fig|6666666.65907.peg.2139 CDS gi|333351994|gb|AFIZ01000013.1| 78152 76314 -2 - 1839 ABC transporter, ATP-binding protein - none -
fig|6666666.65907.peg.2140 CDS gi|333351994|gb|AFIZ01000013.1| 79212 78187 -3 - 1026 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.2141 CDS gi|333351994|gb|AFIZ01000013.1| 80147 79209 -2 - 939 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.65907.peg.2142 CDS gi|333351994|gb|AFIZ01000013.1| 81342 80185 -3 - 1158 Cell wall-binding protein - none -
fig|6666666.65907.peg.2143 CDS gi|333351994|gb|AFIZ01000013.1| 82305 81466 -3 - 840 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65907.peg.2144 CDS gi|333351994|gb|AFIZ01000013.1| 82584 82435 -3 - 150 hypothetical protein - none -
fig|6666666.65907.peg.2145 CDS gi|333351994|gb|AFIZ01000013.1| 84445 82610 -1 - 1836 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65907.peg.2146 CDS gi|333351994|gb|AFIZ01000013.1| 85372 84464 -1 - 909 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65907.peg.2147 CDS gi|333351994|gb|AFIZ01000013.1| 85402 87000 1 + 1599 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.2148 CDS gi|333351994|gb|AFIZ01000013.1| 87823 87014 -1 - 810 hypothetical protein - none -
fig|6666666.65907.peg.2149 CDS gi|333351994|gb|AFIZ01000013.1| 88247 87837 -2 - 411 FIG00544115: hypothetical protein - none -
fig|6666666.65907.peg.2150 CDS gi|333351994|gb|AFIZ01000013.1| 89474 88281 -2 - 1194 hypothetical protein - none -
fig|6666666.65907.peg.2151 CDS gi|333351994|gb|AFIZ01000013.1| 90209 89556 -2 - 654 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.65907.peg.2152 CDS gi|333351994|gb|AFIZ01000013.1| 91447 90206 -1 - 1242 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65907.peg.2153 CDS gi|333351994|gb|AFIZ01000013.1| 92335 91454 -1 - 882 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65907.peg.2154 CDS gi|333351994|gb|AFIZ01000013.1| 92462 93223 2 + 762 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65907.peg.2155 CDS gi|333351994|gb|AFIZ01000013.1| 93248 93736 2 + 489 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65907.peg.2156 CDS gi|333351994|gb|AFIZ01000013.1| 93920 93774 -2 - 147 hypothetical protein - none -
fig|6666666.65907.peg.2157 CDS gi|333351994|gb|AFIZ01000013.1| 94651 93956 -1 - 696 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65907.peg.2158 CDS gi|333351994|gb|AFIZ01000013.1| 96122 94776 -2 - 1347 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.65907.peg.2159 CDS gi|333351994|gb|AFIZ01000013.1| 96988 96326 -1 - 663 Mycobacterial persistence regulator MprA (Two component response transcriptional regulatory protein) - none -
fig|6666666.65907.peg.2160 CDS gi|333351994|gb|AFIZ01000013.1| 97443 97276 -3 - 168 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65907.peg.2161 CDS gi|333351994|gb|AFIZ01000013.1| 97729 97463 -1 - 267 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.65907.peg.2162 CDS gi|333351994|gb|AFIZ01000013.1| 98117 98353 2 + 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65907.peg.2163 CDS gi|333351994|gb|AFIZ01000013.1| 98353 98517 1 + 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65907.peg.2164 CDS gi|333351994|gb|AFIZ01000013.1| 98521 98826 1 + 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.65907.peg.2165 CDS gi|333351994|gb|AFIZ01000013.1| 98843 99091 2 + 249 SSU ribosomal protein S18p - none -
fig|6666666.65907.peg.2166 CDS gi|333351994|gb|AFIZ01000013.1| 99239 99877 2 + 639 hypothetical protein - none -
fig|6666666.65907.peg.2167 CDS gi|333351994|gb|AFIZ01000013.1| 99976 100953 1 + 978 putative membrane protein - none -
fig|6666666.65907.peg.2168 CDS gi|333351994|gb|AFIZ01000013.1| 101067 102161 3 + 1095 hypothetical protein - none -
fig|6666666.65907.peg.2169 CDS gi|333351994|gb|AFIZ01000013.1| 102501 102626 3 + 126 hypothetical protein - none -
fig|6666666.65907.peg.2170 CDS gi|333351994|gb|AFIZ01000013.1| 103850 102648 -2 - 1203 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Mevalonate Branch of Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65907.peg.2171 CDS gi|333351994|gb|AFIZ01000013.1| 104622 103987 -3 - 636 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.65907.peg.2172 CDS gi|333351994|gb|AFIZ01000013.1| 105392 104619 -2 - 774 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.65907.peg.2173 CDS gi|333351994|gb|AFIZ01000013.1| 106725 105562 -3 - 1164 hypothetical protein - none -
fig|6666666.65907.peg.2174 CDS gi|333351994|gb|AFIZ01000013.1| 108457 106748 -1 - 1710 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.2175 CDS gi|333351994|gb|AFIZ01000013.1| 109359 108454 -3 - 906 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) - none -
fig|6666666.65907.peg.2176 CDS gi|333351994|gb|AFIZ01000013.1| 109850 109356 -2 - 495 POSSIBLE OXIDASE REGULATORY-RELATED PROTEIN - none -
fig|6666666.65907.peg.2177 CDS gi|333351994|gb|AFIZ01000013.1| 111049 109853 -1 - 1197 Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) - none -
fig|6666666.65907.peg.2178 CDS gi|333351994|gb|AFIZ01000013.1| 111645 111103 -3 - 543 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Serine-glyoxylate cycle
fig|6666666.65907.peg.2179 CDS gi|333351995|gb|AFIZ01000012.1| 1633 464 -1 - 1170 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.65907.peg.2180 CDS gi|333351995|gb|AFIZ01000012.1| 1804 2445 1 + 642 hypothetical protein - none -
fig|6666666.65907.peg.2181 CDS gi|333351995|gb|AFIZ01000012.1| 2442 4211 3 + 1770 hypothetical protein - none -
fig|6666666.65907.peg.2182 CDS gi|333351995|gb|AFIZ01000012.1| 4222 4932 1 + 711 hypothetical protein - none -
fig|6666666.65907.peg.2183 CDS gi|333351995|gb|AFIZ01000012.1| 4925 5818 2 + 894 hypothetical protein - none -
fig|6666666.65907.peg.2184 CDS gi|333351995|gb|AFIZ01000012.1| 5858 6802 2 + 945 Membrane protein, putative - none -
fig|6666666.65907.peg.2185 CDS gi|333351995|gb|AFIZ01000012.1| 7674 6817 -3 - 858 Metal-dependent hydrolase - none -
fig|6666666.65907.peg.2186 CDS gi|333351995|gb|AFIZ01000012.1| 9437 7686 -2 - 1752 hypothetical protein - none -
fig|6666666.65907.peg.2187 CDS gi|333351995|gb|AFIZ01000012.1| 10149 9526 -3 - 624 hypothetical protein - none -
fig|6666666.65907.peg.2188 CDS gi|333351995|gb|AFIZ01000012.1| 10764 10447 -3 - 318 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.65907.peg.2189 CDS gi|333351995|gb|AFIZ01000012.1| 11890 10805 -1 - 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65907.peg.2190 CDS gi|333351995|gb|AFIZ01000012.1| 12092 13759 2 + 1668 Sodium-dependent transporter - none -
fig|6666666.65907.peg.2191 CDS gi|333351995|gb|AFIZ01000012.1| 13756 13920 1 + 165 hypothetical protein - none -
fig|6666666.65907.peg.2192 CDS gi|333351995|gb|AFIZ01000012.1| 14000 15631 2 + 1632 FIG00546199: hypothetical protein - none -
fig|6666666.65907.peg.2193 CDS gi|333351995|gb|AFIZ01000012.1| 15657 16496 3 + 840 hypothetical protein - none -
fig|6666666.65907.peg.2194 CDS gi|333351995|gb|AFIZ01000012.1| 17485 16457 -1 - 1029 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.2195 CDS gi|333351995|gb|AFIZ01000012.1| 17608 18894 1 + 1287 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65907.peg.2196 CDS gi|333351995|gb|AFIZ01000012.1| 18887 19159 2 + 273 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65907.peg.2197 CDS gi|333351995|gb|AFIZ01000012.1| 19750 19160 -1 - 591 FIG00545451: hypothetical protein - none -
fig|6666666.65907.peg.2198 CDS gi|333351995|gb|AFIZ01000012.1| 19889 20908 2 + 1020 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65907.peg.2199 CDS gi|333351995|gb|AFIZ01000012.1| 20989 22464 1 + 1476 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65907.peg.2200 CDS gi|333351995|gb|AFIZ01000012.1| 22870 22574 -1 - 297 hypothetical protein - none -
fig|6666666.65907.peg.2201 CDS gi|333351995|gb|AFIZ01000012.1| 23232 25718 3 + 2487 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65907.peg.2202 CDS gi|333351995|gb|AFIZ01000012.1| 25696 26616 1 + 921 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.65907.peg.2203 CDS gi|333351995|gb|AFIZ01000012.1| 26735 27412 2 + 678 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.2204 CDS gi|333351995|gb|AFIZ01000012.1| 27479 29056 2 + 1578 permease of the major facilitator superfamily - none -
fig|6666666.65907.peg.2205 CDS gi|333351995|gb|AFIZ01000012.1| 29676 29152 -3 - 525 sortase or related acyltransferase - none -
fig|6666666.65907.peg.2206 CDS gi|333351995|gb|AFIZ01000012.1| 31146 29740 -3 - 1407 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.65907.peg.2207 CDS gi|333351995|gb|AFIZ01000012.1| 31872 31222 -3 - 651 FIG00544545: hypothetical protein - none -
fig|6666666.65907.peg.2208 CDS gi|333351995|gb|AFIZ01000012.1| 32588 31974 -2 - 615 putative LysR-family transcriptional regulator - none -
fig|6666666.65907.peg.2209 CDS gi|333351995|gb|AFIZ01000012.1| 32648 32989 2 + 342 FIG00546727: hypothetical protein - none -
fig|6666666.65907.peg.2210 CDS gi|333351995|gb|AFIZ01000012.1| 34187 33015 -2 - 1173 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.65907.peg.2211 CDS gi|333351996|gb|AFIZ01000011.1| 816 205 -3 - 612 hypothetical protein - none -
fig|6666666.65907.peg.2212 CDS gi|333351996|gb|AFIZ01000011.1| 1071 865 -3 - 207 hypothetical protein - none -
fig|6666666.65907.peg.2213 CDS gi|333351996|gb|AFIZ01000011.1| 1233 2276 3 + 1044 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65907.peg.2214 CDS gi|333351996|gb|AFIZ01000011.1| 2363 3613 2 + 1251 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65907.peg.2215 CDS gi|333351996|gb|AFIZ01000011.1| 3707 4279 2 + 573 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.2216 CDS gi|333351996|gb|AFIZ01000011.1| 4291 5421 1 + 1131 Mrp protein homolog - none -
fig|6666666.65907.peg.2217 CDS gi|333351996|gb|AFIZ01000011.1| 6195 5557 -3 - 639 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65907.peg.2218 CDS gi|333351996|gb|AFIZ01000011.1| 6740 6279 -2 - 462 hypothetical protein - none -
fig|6666666.65907.peg.2219 CDS gi|333351996|gb|AFIZ01000011.1| 7380 6775 -3 - 606 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65907.peg.2220 CDS gi|333351996|gb|AFIZ01000011.1| 7672 8358 1 + 687 FIG00945644: hypothetical protein - none -
fig|6666666.65907.peg.2221 CDS gi|333351996|gb|AFIZ01000011.1| 8474 9187 2 + 714 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65907.peg.2222 CDS gi|333351996|gb|AFIZ01000011.1| 9213 10691 3 + 1479 levanase/invertase - none -
fig|6666666.65907.peg.2223 CDS gi|333351996|gb|AFIZ01000011.1| 11855 10956 -2 - 900 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.65907.peg.2224 CDS gi|333351996|gb|AFIZ01000011.1| 13410 11881 -3 - 1530 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65907.peg.2225 CDS gi|333351996|gb|AFIZ01000011.1| 14272 13403 -1 - 870 FIG00543965: hypothetical protein - none -
fig|6666666.65907.peg.2226 CDS gi|333351996|gb|AFIZ01000011.1| 15472 14294 -1 - 1179 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65907.peg.2227 CDS gi|333351996|gb|AFIZ01000011.1| 15537 16949 3 + 1413 Aromatic amino acid transport protein AroP - none -
fig|6666666.65907.peg.2228 CDS gi|333351996|gb|AFIZ01000011.1| 16978 17889 1 + 912 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65907.peg.2229 CDS gi|333351996|gb|AFIZ01000011.1| 19279 18149 -1 - 1131 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65907.peg.2230 CDS gi|333351996|gb|AFIZ01000011.1| 19664 19341 -2 - 324 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.65907.peg.2231 CDS gi|333351996|gb|AFIZ01000011.1| 20176 19751 -1 - 426 hypothetical membrane protein - none -
fig|6666666.65907.peg.2232 CDS gi|333351996|gb|AFIZ01000011.1| 21149 20181 -2 - 969 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65907.peg.2233 CDS gi|333351996|gb|AFIZ01000011.1| 23029 21146 -1 - 1884 LpqW - none -
fig|6666666.65907.peg.2234 CDS gi|333351996|gb|AFIZ01000011.1| 25015 23102 -1 - 1914 GTP-binding protein TypA/BipA - none -
fig|6666666.65907.peg.2235 CDS gi|333351996|gb|AFIZ01000011.1| 25191 25883 3 + 693 FIG00544264: hypothetical protein - none -
fig|6666666.65907.peg.2236 CDS gi|333351996|gb|AFIZ01000011.1| 25901 26479 2 + 579 FIG00544603: hypothetical protein - none -
fig|6666666.65907.peg.2237 CDS gi|333351997|gb|AFIZ01000010.1| 884 12 -2 - 873 Transcriptional regulator - none -
fig|6666666.65907.peg.2238 CDS gi|333351997|gb|AFIZ01000010.1| 956 1720 2 + 765 Transporter, LysE family - none -
fig|6666666.65907.peg.2239 CDS gi|333351997|gb|AFIZ01000010.1| 3203 1908 -2 - 1296 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.65907.peg.2240 CDS gi|333351997|gb|AFIZ01000010.1| 3359 4408 2 + 1050 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.65907.peg.2241 CDS gi|333351997|gb|AFIZ01000010.1| 5948 4449 -2 - 1500 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.65907.peg.2242 CDS gi|333351997|gb|AFIZ01000010.1| 7486 5948 -1 - 1539 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.65907.peg.2243 CDS gi|333351997|gb|AFIZ01000010.1| 9307 7802 -1 - 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65907.peg.2244 CDS gi|333351997|gb|AFIZ01000010.1| 10335 9331 -3 - 1005 Sodium-dependent transporter - none -
fig|6666666.65907.peg.2245 CDS gi|333351997|gb|AFIZ01000010.1| 11717 10617 -2 - 1101 hypothetical protein - none -
fig|6666666.65907.peg.2246 CDS gi|333351997|gb|AFIZ01000010.1| 12993 11965 -3 - 1029 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65907.peg.2247 CDS gi|333351997|gb|AFIZ01000010.1| 14501 13056 -2 - 1446 permease of the major facilitator superfamily - none -
fig|6666666.65907.peg.2248 CDS gi|333351997|gb|AFIZ01000010.1| 15258 14587 -3 - 672 mutT3 - none -
fig|6666666.65907.peg.2249 CDS gi|333351997|gb|AFIZ01000010.1| 15341 15997 2 + 657 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.2250 CDS gi|333351997|gb|AFIZ01000010.1| 17583 16078 -3 - 1506 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65907.peg.2251 CDS gi|333351997|gb|AFIZ01000010.1| 17914 17609 -1 - 306 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65907.peg.2252 CDS gi|333351997|gb|AFIZ01000010.1| 18145 18810 1 + 666 FIG00544014: hypothetical protein - none -
fig|6666666.65907.peg.2253 CDS gi|333351997|gb|AFIZ01000010.1| 20191 19034 -1 - 1158 hypothetical protein - none -
fig|6666666.65907.peg.2254 CDS gi|333351997|gb|AFIZ01000010.1| 21916 20375 -1 - 1542 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65907.peg.2255 CDS gi|333351997|gb|AFIZ01000010.1| 22650 21961 -3 - 690 FIG00544413: hypothetical protein - none -
fig|6666666.65907.peg.2256 CDS gi|333351997|gb|AFIZ01000010.1| 22867 22745 -1 - 123 hypothetical protein - none -
fig|6666666.65907.peg.2257 CDS gi|333351997|gb|AFIZ01000010.1| 23036 25309 2 + 2274 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65907.peg.2258 CDS gi|333351997|gb|AFIZ01000010.1| 25537 27111 1 + 1575 ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.2259 CDS gi|333351997|gb|AFIZ01000010.1| 27099 27425 3 + 327 hypothetical protein - none -
fig|6666666.65907.peg.2260 CDS gi|333351997|gb|AFIZ01000010.1| 28623 27598 -3 - 1026 hypothetical protein - none -
fig|6666666.65907.peg.2261 CDS gi|333351997|gb|AFIZ01000010.1| 29756 28620 -2 - 1137 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria
fig|6666666.65907.peg.2262 CDS gi|333351997|gb|AFIZ01000010.1| 30777 29806 -3 - 972 hypothetical protein - none -
fig|6666666.65907.peg.2263 CDS gi|333351997|gb|AFIZ01000010.1| 32014 30800 -1 - 1215 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria
fig|6666666.65907.peg.2264 CDS gi|333351997|gb|AFIZ01000010.1| 33615 32011 -3 - 1605 Na+/H+ antiporter - none -
fig|6666666.65907.peg.2265 CDS gi|333351997|gb|AFIZ01000010.1| 34769 33816 -2 - 954 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65907.peg.2266 CDS gi|333351997|gb|AFIZ01000010.1| 35609 34821 -2 - 789 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65907.peg.2267 CDS gi|333351997|gb|AFIZ01000010.1| 37032 35782 -3 - 1251 SAM-dependent methyltransferase - none -
fig|6666666.65907.peg.2268 CDS gi|333351997|gb|AFIZ01000010.1| 37949 37044 -2 - 906 FIG00996530: hypothetical protein - none -
fig|6666666.65907.peg.2269 CDS gi|333351997|gb|AFIZ01000010.1| 38823 37951 -3 - 873 ABC transporter, ATP-binding protein - none -
fig|6666666.65907.peg.2270 CDS gi|333351997|gb|AFIZ01000010.1| 39795 38848 -3 - 948 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65907.peg.2271 CDS gi|333351997|gb|AFIZ01000010.1| 40087 39797 -1 - 291 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.65907.peg.2272 CDS gi|333351997|gb|AFIZ01000010.1| 40777 40103 -1 - 675 Protein of unknown function DUF91 - none -
fig|6666666.65907.peg.2273 CDS gi|333351997|gb|AFIZ01000010.1| 41117 40836 -2 - 282 hypothetical protein - none -
fig|6666666.65907.peg.2274 CDS gi|333351997|gb|AFIZ01000010.1| 41898 41521 -3 - 378 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2275 CDS gi|333351997|gb|AFIZ01000010.1| 43359 41911 -3 - 1449 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2276 CDS gi|333351997|gb|AFIZ01000010.1| 44337 43363 -3 - 975 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2277 CDS gi|333351997|gb|AFIZ01000010.1| 46057 44390 -1 - 1668 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2278 CDS gi|333351997|gb|AFIZ01000010.1| 46905 46087 -3 - 819 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2279 CDS gi|333351997|gb|AFIZ01000010.1| 47456 46911 -2 - 546 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2280 CDS gi|333351997|gb|AFIZ01000010.1| 47784 47542 -3 - 243 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2281 CDS gi|333351997|gb|AFIZ01000010.1| 48715 47885 -1 - 831 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65907.peg.2282 CDS gi|333351997|gb|AFIZ01000010.1| 49507 49010 -1 - 498 ATP synthase protein I - none -
fig|6666666.65907.peg.2283 CDS gi|333351997|gb|AFIZ01000010.1| 50702 49518 -2 - 1185 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.65907.peg.2284 CDS gi|333351997|gb|AFIZ01000010.1| 51373 50708 -1 - 666 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65907.peg.2285 CDS gi|333351997|gb|AFIZ01000010.1| 52430 51450 -2 - 981 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.65907.peg.2286 CDS gi|333351997|gb|AFIZ01000010.1| 53595 52510 -3 - 1086 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.65907.peg.2287 CDS gi|333351997|gb|AFIZ01000010.1| 55435 53588 -1 - 1848 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65907.peg.2288 CDS gi|333351997|gb|AFIZ01000010.1| 55857 57674 3 + 1818 acyl-CoA synthetase - none -
fig|6666666.65907.peg.2289 CDS gi|333351997|gb|AFIZ01000010.1| 58666 57701 -1 - 966 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.2290 CDS gi|333351997|gb|AFIZ01000010.1| 59745 58663 -3 - 1083 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.2291 CDS gi|333351997|gb|AFIZ01000010.1| 61073 59745 -2 - 1329 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65907.peg.2292 CDS gi|333351997|gb|AFIZ01000010.1| 62541 61135 -3 - 1407 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65907.peg.2293 CDS gi|333351997|gb|AFIZ01000010.1| 64222 62546 -1 - 1677 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65907.peg.2294 CDS gi|333351997|gb|AFIZ01000010.1| 68038 65273 -1 - 2766 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.65907.peg.2295 CDS gi|333351997|gb|AFIZ01000010.1| 69275 68040 -2 - 1236 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65907.peg.2296 CDS gi|333351997|gb|AFIZ01000010.1| 70368 69268 -3 - 1101 hypothetical protein - none -
fig|6666666.65907.peg.2297 CDS gi|333351997|gb|AFIZ01000010.1| 73696 70352 -1 - 3345 Helicase, SNF2/RAD54 family - none -
fig|6666666.65907.peg.2298 CDS gi|333351997|gb|AFIZ01000010.1| 73782 74450 3 + 669 hypothetical protein - none -
fig|6666666.65907.peg.2299 CDS gi|333351997|gb|AFIZ01000010.1| 76600 74540 -1 - 2061 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65907.peg.2300 CDS gi|333351997|gb|AFIZ01000010.1| 76831 78228 1 + 1398 putative gamma-aminobutyrate permease - none -
fig|6666666.65907.peg.2301 CDS gi|333351997|gb|AFIZ01000010.1| 78368 79831 2 + 1464 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65907.peg.2302 CDS gi|333351997|gb|AFIZ01000010.1| 80461 81150 1 + 690 hypothetical protein - none -
fig|6666666.65907.peg.2303 CDS gi|333351997|gb|AFIZ01000010.1| 82049 81234 -2 - 816 hypothetical protein - none -
fig|6666666.65907.peg.2304 CDS gi|333351997|gb|AFIZ01000010.1| 82175 85741 2 + 3567 FIG00543822: hypothetical protein - none -
fig|6666666.65907.peg.2305 CDS gi|333351997|gb|AFIZ01000010.1| 85869 89591 3 + 3723 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65907.peg.2306 CDS gi|333351998|gb|AFIZ01000009.1| 1314 301 -3 - 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65907.peg.2307 CDS gi|333351998|gb|AFIZ01000009.1| 1930 1424 -1 - 507 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65907.peg.2308 CDS gi|333351998|gb|AFIZ01000009.1| 3768 1933 -3 - 1836 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65907.peg.2309 CDS gi|333351998|gb|AFIZ01000009.1| 4099 3902 -1 - 198 hypothetical protein - none -
fig|6666666.65907.peg.2310 CDS gi|333351998|gb|AFIZ01000009.1| 4139 5863 2 + 1725 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65907.peg.2311 CDS gi|333351998|gb|AFIZ01000009.1| 5874 6464 3 + 591 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65907.peg.2312 CDS gi|333351998|gb|AFIZ01000009.1| 6583 8436 1 + 1854 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65907.peg.2313 CDS gi|333351998|gb|AFIZ01000009.1| 9381 8635 -3 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.2314 CDS gi|333351999|gb|AFIZ01000008.1| 41 802 2 + 762 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65907.peg.2315 CDS gi|333351999|gb|AFIZ01000008.1| 816 1970 3 + 1155 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65907.peg.2316 CDS gi|333351999|gb|AFIZ01000008.1| 2307 2582 3 + 276 hypothetical protein - none -
fig|6666666.65907.peg.2317 CDS gi|333351999|gb|AFIZ01000008.1| 3580 2807 -1 - 774 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65907.peg.2318 CDS gi|333351999|gb|AFIZ01000008.1| 4420 3740 -1 - 681 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.65907.peg.2319 CDS gi|333351999|gb|AFIZ01000008.1| 5786 4446 -2 - 1341 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65907.peg.2320 CDS gi|333351999|gb|AFIZ01000008.1| 6343 5786 -1 - 558 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65907.peg.2321 CDS gi|333351999|gb|AFIZ01000008.1| 6468 7046 3 + 579 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65907.peg.2322 CDS gi|333351999|gb|AFIZ01000008.1| 7048 9150 1 + 2103 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.65907.peg.2323 CDS gi|333351999|gb|AFIZ01000008.1| 9330 9554 3 + 225 Assimilatory nitrate reductase large subunit (EC:1.7.99.4) Nitrate and nitrite ammonification
fig|6666666.65907.peg.2324 CDS gi|333351999|gb|AFIZ01000008.1| 11034 9874 -3 - 1161 Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein - none -
fig|6666666.65907.peg.2325 CDS gi|333351999|gb|AFIZ01000008.1| 11562 11140 -3 - 423 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) Nitrate and nitrite ammonification
fig|6666666.65907.peg.2326 CDS gi|333351999|gb|AFIZ01000008.1| 14280 11599 -3 - 2682 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Nitrate and nitrite ammonification
fig|6666666.65907.peg.2327 CDS gi|333351999|gb|AFIZ01000008.1| 14740 16320 1 + 1581 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65907.peg.2328 CDS gi|333351999|gb|AFIZ01000008.1| 16323 17453 3 + 1131 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65907.peg.2329 CDS gi|333351999|gb|AFIZ01000008.1| 17456 19030 2 + 1575 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65907.peg.2330 CDS gi|333351999|gb|AFIZ01000008.1| 19027 20676 1 + 1650 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65907.peg.2331 CDS gi|333351999|gb|AFIZ01000008.1| 20869 21228 1 + 360 hypothetical protein - none -
fig|6666666.65907.peg.2332 CDS gi|333351999|gb|AFIZ01000008.1| 21592 21317 -1 - 276 hypothetical protein - none -
fig|6666666.65907.peg.2333 CDS gi|333351999|gb|AFIZ01000008.1| 21969 21703 -3 - 267 hypothetical protein - none -
fig|6666666.65907.peg.2334 CDS gi|333351999|gb|AFIZ01000008.1| 22398 22715 3 + 318 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.65907.peg.2335 CDS gi|333351999|gb|AFIZ01000008.1| 23746 22727 -1 - 1020 secreted lipase - none -
fig|6666666.65907.peg.2336 CDS gi|333351999|gb|AFIZ01000008.1| 23881 24429 1 + 549 hypothetical protein - none -
fig|6666666.65907.peg.2337 CDS gi|333351999|gb|AFIZ01000008.1| 24542 24703 2 + 162 hypothetical protein - none -
fig|6666666.65907.peg.2338 CDS gi|333351999|gb|AFIZ01000008.1| 25812 24751 -3 - 1062 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65907.peg.2339 CDS gi|333351999|gb|AFIZ01000008.1| 26041 27396 1 + 1356 Probable conserved integral membrane protein - none -
fig|6666666.65907.peg.2340 CDS gi|333351999|gb|AFIZ01000008.1| 28631 27393 -2 - 1239 integral membrane transport protein - none -
fig|6666666.65907.peg.2341 CDS gi|333351999|gb|AFIZ01000008.1| 29178 28681 -3 - 498 Transcriptional regulator, MarR family - none -
fig|6666666.65907.peg.2342 CDS gi|333351999|gb|AFIZ01000008.1| 31040 29445 -2 - 1596 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65907.peg.2343 CDS gi|333351999|gb|AFIZ01000008.1| 32285 31251 -2 - 1035 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65907.peg.2344 CDS gi|333352000|gb|AFIZ01000007.1| 219 1946 3 + 1728 hypothetical protein - none -
fig|6666666.65907.peg.2345 CDS gi|333352000|gb|AFIZ01000007.1| 2309 2013 -2 - 297 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65907.peg.2346 CDS gi|333352000|gb|AFIZ01000007.1| 2992 2417 -1 - 576 GCN5-related N-acetyltransferase - none -
fig|6666666.65907.peg.2347 CDS gi|333352000|gb|AFIZ01000007.1| 4507 3026 -1 - 1482 amino acid carrier protein - none -
fig|6666666.65907.peg.2348 CDS gi|333352000|gb|AFIZ01000007.1| 6404 5517 -2 - 888 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65907.peg.2349 CDS gi|333352000|gb|AFIZ01000007.1| 7158 6427 -3 - 732 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65907.peg.2350 CDS gi|333352000|gb|AFIZ01000007.1| 7628 7158 -2 - 471 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65907.peg.2351 CDS gi|333352000|gb|AFIZ01000007.1| 8656 7853 -1 - 804 Cell division initiation protein - none -
fig|6666666.65907.peg.2352 CDS gi|333352000|gb|AFIZ01000007.1| 9428 8937 -2 - 492 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.65907.peg.2353 CDS gi|333352000|gb|AFIZ01000007.1| 9441 9821 3 + 381 hypothetical protein - none -
fig|6666666.65907.peg.2354 CDS gi|333352000|gb|AFIZ01000007.1| 10413 9841 -3 - 573 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.65907.peg.2355 CDS gi|333352000|gb|AFIZ01000007.1| 10631 10410 -2 - 222 Pyruvate carboxylase, C-terminal domain/subunit (EC 2.1.3.1) - none -
fig|6666666.65907.peg.2356 CDS gi|333352000|gb|AFIZ01000007.1| 12955 10703 -1 - 2253 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65907.peg.2357 CDS gi|333352000|gb|AFIZ01000007.1| 14470 12956 -1 - 1515 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.2358 CDS gi|333352000|gb|AFIZ01000007.1| 15175 14471 -1 - 705 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65907.peg.2359 CDS gi|333352000|gb|AFIZ01000007.1| 16173 15172 -3 - 1002 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65907.peg.2360 CDS gi|333352000|gb|AFIZ01000007.1| 16232 17248 2 + 1017 Putative exported protein - none -
fig|6666666.65907.peg.2361 CDS gi|333352000|gb|AFIZ01000007.1| 18412 17324 -1 - 1089 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65907.peg.2362 CDS gi|333352000|gb|AFIZ01000007.1| 19460 18447 -2 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.2363 CDS gi|333352000|gb|AFIZ01000007.1| 19583 20626 2 + 1044 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65907.peg.2364 CDS gi|333352000|gb|AFIZ01000007.1| 21224 20637 -2 - 588 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65907.peg.2365 CDS gi|333352000|gb|AFIZ01000007.1| 22706 21240 -2 - 1467 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65907.peg.2366 CDS gi|333352000|gb|AFIZ01000007.1| 22819 23544 1 + 726 Transcriptional regulator, IclR family - none -
fig|6666666.65907.peg.2367 CDS gi|333352000|gb|AFIZ01000007.1| 24145 25188 1 + 1044 hypothetical protein - none -
fig|6666666.65907.peg.2368 CDS gi|333352000|gb|AFIZ01000007.1| 25987 25172 -1 - 816 hypothetical protein - none -
fig|6666666.65907.peg.2369 CDS gi|333352000|gb|AFIZ01000007.1| 28179 26686 -3 - 1494 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65907.peg.2370 CDS gi|333352000|gb|AFIZ01000007.1| 28966 28190 -1 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.65907.peg.2371 CDS gi|333352001|gb|AFIZ01000006.1| 114 644 3 + 531 FIG005429: hypothetical protein - none -
fig|6666666.65907.peg.2372 CDS gi|333352001|gb|AFIZ01000006.1| 966 655 -3 - 312 Small uncharacterized protein Bpro_4170 - none -
fig|6666666.65907.peg.2373 CDS gi|333352001|gb|AFIZ01000006.1| 2369 963 -2 - 1407 Protein of unknown function DUF1446 - none -
fig|6666666.65907.peg.2374 CDS gi|333352001|gb|AFIZ01000006.1| 3852 2413 -3 - 1440 Uncharacterized transporter, similarity to citrate transporter - none -
fig|6666666.65907.peg.2375 CDS gi|333352001|gb|AFIZ01000006.1| 3921 4883 3 + 963 hypothetical protein - none -
fig|6666666.65907.peg.2376 CDS gi|333352001|gb|AFIZ01000006.1| 5669 4890 -2 - 780 hypothetical protein - none -
fig|6666666.65907.peg.2377 CDS gi|333352001|gb|AFIZ01000006.1| 5777 6703 2 + 927 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65907.peg.2378 CDS gi|333352001|gb|AFIZ01000006.1| 6707 7729 2 + 1023 putative lipase - none -
fig|6666666.65907.peg.2379 CDS gi|333352001|gb|AFIZ01000006.1| 8200 8048 -1 - 153 hypothetical protein - none -
fig|6666666.65907.peg.2380 CDS gi|333352001|gb|AFIZ01000006.1| 8379 9854 3 + 1476 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.65907.peg.2381 CDS gi|333352001|gb|AFIZ01000006.1| 10410 9895 -3 - 516 hypothetical protein - none -
fig|6666666.65907.peg.2382 CDS gi|333352001|gb|AFIZ01000006.1| 11569 10676 -1 - 894 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65907.peg.2383 CDS gi|333352001|gb|AFIZ01000006.1| 13507 11642 -1 - 1866 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.2384 CDS gi|333352001|gb|AFIZ01000006.1| 14687 13524 -2 - 1164 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.2385 CDS gi|333352001|gb|AFIZ01000006.1| 16066 14795 -1 - 1272 Membrane-associated zinc metalloprotease - none -
fig|6666666.65907.peg.2386 CDS gi|333352001|gb|AFIZ01000006.1| 17397 16051 -3 - 1347 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65907.peg.2387 CDS gi|333352001|gb|AFIZ01000006.1| 17386 17844 1 + 459 hypothetical membrane protein - none -
fig|6666666.65907.peg.2388 CDS gi|333352001|gb|AFIZ01000006.1| 19608 18151 -3 - 1458 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.65907.peg.2389 CDS gi|333352001|gb|AFIZ01000006.1| 20647 19742 -1 - 906 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.2390 CDS gi|333352001|gb|AFIZ01000006.1| 21209 20652 -2 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65907.peg.2391 CDS gi|333352001|gb|AFIZ01000006.1| 22022 21273 -2 - 750 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65907.peg.2392 CDS gi|333352001|gb|AFIZ01000006.1| 23029 22214 -1 - 816 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65907.peg.2393 CDS gi|333352001|gb|AFIZ01000006.1| 24049 23072 -1 - 978 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.65907.peg.2394 CDS gi|333352001|gb|AFIZ01000006.1| 24433 24999 1 + 567 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.65907.peg.2395 CDS gi|333352001|gb|AFIZ01000006.1| 25965 25018 -3 - 948 Tyrosine recombinase XerC - none -
fig|6666666.65907.peg.2396 CDS gi|333352001|gb|AFIZ01000006.1| 27327 26059 -3 - 1269 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65907.peg.2397 CDS gi|333352001|gb|AFIZ01000006.1| 28949 27324 -2 - 1626 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65907.peg.2398 CDS gi|333352001|gb|AFIZ01000006.1| 29338 28946 -1 - 393 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.65907.peg.2399 CDS gi|333352001|gb|AFIZ01000006.1| 29827 29522 -1 - 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65907.peg.2400 CDS gi|333352001|gb|AFIZ01000006.1| 30520 29837 -1 - 684 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.65907.peg.2401 CDS gi|333352001|gb|AFIZ01000006.1| 31394 30522 -2 - 873 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65907.peg.2402 CDS gi|333352001|gb|AFIZ01000006.1| 32201 31857 -2 - 345 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65907.peg.2403 CDS gi|333352001|gb|AFIZ01000006.1| 34632 32359 -3 - 2274 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65907.peg.2404 CDS gi|333352001|gb|AFIZ01000006.1| 35176 34694 -1 - 483 hypothetical protein - none -
fig|6666666.65907.peg.2405 CDS gi|333352001|gb|AFIZ01000006.1| 35211 35339 3 + 129 hypothetical protein - none -
fig|6666666.65907.peg.2406 CDS gi|333352001|gb|AFIZ01000006.1| 36613 35609 -1 - 1005 hypothetical protein - none -
fig|6666666.65907.peg.2407 CDS gi|333352001|gb|AFIZ01000006.1| 37627 36770 -1 - 858 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.65907.peg.2408 CDS gi|333352001|gb|AFIZ01000006.1| 38222 37647 -2 - 576 16S rRNA processing protein RimM - none -
fig|6666666.65907.peg.2409 CDS gi|333352001|gb|AFIZ01000006.1| 39576 38233 -3 - 1344 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65907.peg.2410 CDS gi|333352001|gb|AFIZ01000006.1| 40432 39944 -1 - 489 SSU ribosomal protein S16p - none -
fig|6666666.65907.peg.2411 CDS gi|333352001|gb|AFIZ01000006.1| 42203 40596 -2 - 1608 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65907.peg.2412 CDS gi|333352001|gb|AFIZ01000006.1| 43748 42372 -2 - 1377 Ammonium transporter Ammonia assimilation
fig|6666666.65907.peg.2413 CDS gi|333352001|gb|AFIZ01000006.1| 45528 43936 -3 - 1593 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65907.peg.2414 CDS gi|333352001|gb|AFIZ01000006.1| 45936 47267 3 + 1332 possible esterase - none -
fig|6666666.65907.peg.2415 CDS gi|333352001|gb|AFIZ01000006.1| 50732 47340 -2 - 3393 Putative membrane protein found fused to lysyl-tRNA synthetase like protein / Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein tRNA aminoacylation, Lys;
tRNA aminoacylation, Lys
fig|6666666.65907.peg.2416 CDS gi|333352001|gb|AFIZ01000006.1| 54403 50861 -1 - 3543 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.65907.peg.2417 CDS gi|333352001|gb|AFIZ01000006.1| 55398 54415 -3 - 984 Chromosome partition protein smc - none -
fig|6666666.65907.peg.2418 CDS gi|333352002|gb|AFIZ01000005.1| 1055 123 -2 - 933 hypothetical protein - none -
fig|6666666.65907.peg.2419 CDS gi|333352002|gb|AFIZ01000005.1| 1240 2307 1 + 1068 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.65907.peg.2420 CDS gi|333352002|gb|AFIZ01000005.1| 2304 3149 3 + 846 probable iron ABC transporter, ATP-binding protein( EC:3.6.3.34 ) - none -
fig|6666666.65907.peg.2421 CDS gi|333352002|gb|AFIZ01000005.1| 3146 4132 2 + 987 hypothetical protein - none -
fig|6666666.65907.peg.2422 CDS gi|333352002|gb|AFIZ01000005.1| 4544 4221 -2 - 324 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.65907.peg.2423 CDS gi|333352002|gb|AFIZ01000005.1| 6253 4541 -1 - 1713 hypothetical protein - none -
fig|6666666.65907.peg.2424 CDS gi|333352002|gb|AFIZ01000005.1| 7739 6255 -2 - 1485 Sodium/glutamate symporter - none -
fig|6666666.65907.peg.2425 CDS gi|333352002|gb|AFIZ01000005.1| 7740 7907 3 + 168 hypothetical protein - none -
fig|6666666.65907.peg.2426 CDS gi|333352002|gb|AFIZ01000005.1| 8284 7970 -1 - 315 hypothetical protein - none -
fig|6666666.65907.peg.2427 CDS gi|333352002|gb|AFIZ01000005.1| 8712 9644 3 + 933 hypothetical protein - none -
fig|6666666.65907.peg.2428 CDS gi|333352002|gb|AFIZ01000005.1| 13180 9863 -1 - 3318 hypothetical protein - none -
fig|6666666.65907.peg.2429 CDS gi|333352002|gb|AFIZ01000005.1| 13943 13227 -2 - 717 hypothetical protein - none -
fig|6666666.65907.peg.2430 CDS gi|333352002|gb|AFIZ01000005.1| 14271 13987 -3 - 285 hypothetical protein - none -
fig|6666666.65907.peg.2431 CDS gi|333352002|gb|AFIZ01000005.1| 15061 16473 1 + 1413 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.65907.peg.2432 CDS gi|333352002|gb|AFIZ01000005.1| 16473 17126 3 + 654 FIG039767: hypothetical protein - none -
fig|6666666.65907.peg.2433 CDS gi|333352002|gb|AFIZ01000005.1| 17123 20509 2 + 3387 FIG007317: hypothetical protein - none -
fig|6666666.65907.peg.2434 CDS gi|333352003|gb|AFIZ01000004.1| 3238 2609 -1 - 630 hypothetical protein - none -
fig|6666666.65907.peg.2435 CDS gi|333352003|gb|AFIZ01000004.1| 5445 3298 -3 - 2148 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.65907.peg.2436 CDS gi|333352003|gb|AFIZ01000004.1| 6364 5456 -1 - 909 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65907.peg.2437 CDS gi|333352003|gb|AFIZ01000004.1| 7251 6439 -3 - 813 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65907.peg.2438 CDS gi|333352003|gb|AFIZ01000004.1| 8008 7259 -1 - 750 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65907.peg.2439 CDS gi|333352003|gb|AFIZ01000004.1| 10442 8094 -2 - 2349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65907.peg.2440 CDS gi|333352003|gb|AFIZ01000004.1| 10452 10598 3 + 147 hypothetical protein - none -
fig|6666666.65907.peg.2441 CDS gi|333352003|gb|AFIZ01000004.1| 10905 10636 -3 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.65907.peg.2442 CDS gi|333352003|gb|AFIZ01000004.1| 12018 10999 -3 - 1020 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65907.peg.2443 CDS gi|333352003|gb|AFIZ01000004.1| 12057 13028 3 + 972 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.65907.peg.2444 CDS gi|333352003|gb|AFIZ01000004.1| 14760 13384 -3 - 1377 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65907.peg.2445 CDS gi|333352003|gb|AFIZ01000004.1| 14815 14961 1 + 147 hypothetical protein - none -
fig|6666666.65907.peg.2446 CDS gi|333352003|gb|AFIZ01000004.1| 14996 15775 2 + 780 FIG01115255: hypothetical protein - none -
fig|6666666.65907.peg.2447 CDS gi|333352003|gb|AFIZ01000004.1| 16572 15769 -3 - 804 4@1-phosphopantetheinyl transferase entD (EC 2.7.8.-) - none -
fig|6666666.65907.peg.2448 CDS gi|333352003|gb|AFIZ01000004.1| 17426 16581 -2 - 846 putative SimX4 homolog - none -
fig|6666666.65907.peg.2449 CDS gi|333352003|gb|AFIZ01000004.1| 18916 17492 -1 - 1425 putative DNA-damage-inducible protein F - none -
fig|6666666.65907.peg.2450 CDS gi|333352003|gb|AFIZ01000004.1| 19349 18894 -2 - 456 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65907.peg.2451 CDS gi|333352003|gb|AFIZ01000004.1| 22385 19443 -2 - 2943 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65907.peg.2452 CDS gi|333352003|gb|AFIZ01000004.1| 22870 22535 -1 - 336 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65907.peg.2453 CDS gi|333352003|gb|AFIZ01000004.1| 23998 22970 -1 - 1029 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65907.peg.2454 CDS gi|333352003|gb|AFIZ01000004.1| 24570 23995 -3 - 576 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.65907.peg.2455 CDS gi|333352003|gb|AFIZ01000004.1| 24666 25544 3 + 879 hypothetical protein - none -
fig|6666666.65907.peg.2456 CDS gi|333352003|gb|AFIZ01000004.1| 27993 26236 -3 - 1758 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65907.peg.2457 CDS gi|333352003|gb|AFIZ01000004.1| 28044 28877 3 + 834 UPF0246 protein YaaA - none -
fig|6666666.65907.peg.2458 CDS gi|333352003|gb|AFIZ01000004.1| 29900 28881 -2 - 1020 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.2459 CDS gi|333352003|gb|AFIZ01000004.1| 31509 30031 -3 - 1479 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65907.peg.2460 CDS gi|333352003|gb|AFIZ01000004.1| 31489 31674 1 + 186 hypothetical protein - none -
fig|6666666.65907.peg.2461 CDS gi|333352003|gb|AFIZ01000004.1| 31664 32824 2 + 1161 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65907.peg.2462 CDS gi|333352003|gb|AFIZ01000004.1| 34189 33002 -1 - 1188 hypothetical protein - none -
fig|6666666.65907.peg.2463 CDS gi|333352003|gb|AFIZ01000004.1| 34421 35875 2 + 1455 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65907.peg.2464 CDS gi|333352003|gb|AFIZ01000004.1| 35883 36704 3 + 822 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65907.peg.2465 CDS gi|333352003|gb|AFIZ01000004.1| 36837 39578 3 + 2742 Mg(2+) transport ATPase, P-type (EC 3.6.3.2) Magnesium transport
fig|6666666.65907.peg.2466 CDS gi|333352003|gb|AFIZ01000004.1| 42327 41272 -3 - 1056 hypothetical protein - none -
fig|6666666.65907.peg.2467 CDS gi|333352003|gb|AFIZ01000004.1| 42331 42957 1 + 627 hypothetical protein - none -
fig|6666666.65907.peg.2468 CDS gi|333352003|gb|AFIZ01000004.1| 43433 42951 -2 - 483 Putative membrane protein - none -
fig|6666666.65907.peg.2469 CDS gi|333352003|gb|AFIZ01000004.1| 45150 43525 -3 - 1626 N-methylhydantoinase B (EC 3.5.2.14) Creatine and Creatinine Degradation;
Hydantoin metabolism
fig|6666666.65907.peg.2470 CDS gi|333352003|gb|AFIZ01000004.1| 47209 45179 -1 - 2031 N-methylhydantoinase A (EC 3.5.2.14) Creatine and Creatinine Degradation;
Hydantoin metabolism
fig|6666666.65907.peg.2471 CDS gi|333352003|gb|AFIZ01000004.1| 48574 47249 -1 - 1326 hypothetical protein - none -
fig|6666666.65907.peg.2472 CDS gi|333352003|gb|AFIZ01000004.1| 48767 49447 2 + 681 Transcriptional regulator, GntR family - none -
fig|6666666.65907.peg.2473 CDS gi|333352003|gb|AFIZ01000004.1| 49851 49510 -3 - 342 hypothetical protein - none -
fig|6666666.65907.peg.2474 CDS gi|333352003|gb|AFIZ01000004.1| 50713 50285 -1 - 429 hypothetical protein - none -
fig|6666666.65907.peg.2475 CDS gi|333352003|gb|AFIZ01000004.1| 50987 50820 -2 - 168 hypothetical protein - none -
fig|6666666.65907.peg.2476 CDS gi|333352003|gb|AFIZ01000004.1| 51082 51306 1 + 225 hypothetical protein - none -
fig|6666666.65907.peg.2477 CDS gi|333352003|gb|AFIZ01000004.1| 51425 56413 2 + 4989 putative helicase - none -
fig|6666666.65907.peg.2478 CDS gi|333352003|gb|AFIZ01000004.1| 56410 58569 1 + 2160 hypothetical protein - none -
fig|6666666.65907.peg.2479 CDS gi|333352004|gb|AFIZ01000003.1| 715 284 -1 - 432 3-dehydroquinate dehydratase II (EC 4.2.1.10) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65907.peg.2480 CDS gi|333352004|gb|AFIZ01000003.1| 2360 717 -2 - 1644 3-dehydroquinate synthase (EC 4.2.3.4) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65907.peg.2481 CDS gi|333352004|gb|AFIZ01000003.1| 3583 2357 -1 - 1227 Chorismate synthase (EC 4.2.3.5) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65907.peg.2482 CDS gi|333352004|gb|AFIZ01000003.1| 4083 3616 -3 - 468 probable type IV peptidase - none -
fig|6666666.65907.peg.2483 CDS gi|333352004|gb|AFIZ01000003.1| 5024 4119 -2 - 906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65907.peg.2484 CDS gi|333352004|gb|AFIZ01000003.1| 6205 5021 -1 - 1185 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65907.peg.2485 CDS gi|333352004|gb|AFIZ01000003.1| 6887 6324 -2 - 564 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65907.peg.2486 CDS gi|333352004|gb|AFIZ01000003.1| 9610 6887 -1 - 2724 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65907.peg.2487 CDS gi|333352004|gb|AFIZ01000003.1| 11011 9659 -1 - 1353 ATPase, AAA family - none -
fig|6666666.65907.peg.2488 CDS gi|333352004|gb|AFIZ01000003.1| 12254 11013 -2 - 1242 FIG00544116: hypothetical protein - none -
fig|6666666.65907.peg.2489 CDS gi|333352004|gb|AFIZ01000003.1| 14067 12265 -3 - 1803 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65907.peg.2490 CDS gi|333352004|gb|AFIZ01000003.1| 14330 14644 2 + 315 hypothetical protein - none -
fig|6666666.65907.peg.2491 CDS gi|333352004|gb|AFIZ01000003.1| 15041 15178 2 + 138 hypothetical protein - none -
fig|6666666.65907.peg.2492 CDS gi|333352004|gb|AFIZ01000003.1| 15759 15196 -3 - 564 hypothetical protein - none -
fig|6666666.65907.peg.2493 CDS gi|333352004|gb|AFIZ01000003.1| 15836 16273 2 + 438 hypothetical protein - none -
fig|6666666.65907.peg.2494 CDS gi|333352004|gb|AFIZ01000003.1| 17259 16300 -3 - 960 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.65907.peg.2495 CDS gi|333352004|gb|AFIZ01000003.1| 18168 17290 -3 - 879 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.65907.peg.2496 CDS gi|333352004|gb|AFIZ01000003.1| 18316 18876 1 + 561 VgrG protein - none -
fig|6666666.65907.peg.2497 CDS gi|333352004|gb|AFIZ01000003.1| 19204 19353 1 + 150 hypothetical protein - none -
fig|6666666.65907.peg.2498 CDS gi|333352004|gb|AFIZ01000003.1| 19792 19421 -1 - 372 putative membrane protein. - none -
fig|6666666.65907.peg.2499 CDS gi|333352004|gb|AFIZ01000003.1| 19993 20964 1 + 972 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65907.peg.2500 CDS gi|333352004|gb|AFIZ01000003.1| 22535 20976 -2 - 1560 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65907.peg.2501 CDS gi|333352004|gb|AFIZ01000003.1| 24038 22557 -2 - 1482 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65907.peg.2502 CDS gi|333352004|gb|AFIZ01000003.1| 26275 24035 -1 - 2241 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65907.peg.2503 CDS gi|333352004|gb|AFIZ01000003.1| 27667 26381 -1 - 1287 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65907.peg.2504 CDS gi|333352004|gb|AFIZ01000003.1| 28357 27710 -1 - 648 hypothetical protein - none -
fig|6666666.65907.peg.2505 CDS gi|333352004|gb|AFIZ01000003.1| 28584 28402 -3 - 183 hypothetical protein - none -
fig|6666666.65907.peg.2506 CDS gi|333352004|gb|AFIZ01000003.1| 29327 28653 -2 - 675 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.65907.peg.2507 CDS gi|333352004|gb|AFIZ01000003.1| 29400 30215 3 + 816 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65907.peg.2508 CDS gi|333352004|gb|AFIZ01000003.1| 30795 31844 3 + 1050 Mobile element protein - none -
fig|6666666.65907.peg.2509 CDS gi|333352004|gb|AFIZ01000003.1| 34659 32380 -3 - 2280 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65907.peg.2510 CDS gi|333352004|gb|AFIZ01000003.1| 35256 34708 -3 - 549 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65907.peg.2511 CDS gi|333352004|gb|AFIZ01000003.1| 36869 35253 -2 - 1617 hypothetical protein - none -
fig|6666666.65907.peg.2512 CDS gi|333352004|gb|AFIZ01000003.1| 38080 36878 -1 - 1203 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65907.peg.2513 CDS gi|333352004|gb|AFIZ01000003.1| 39926 38082 -2 - 1845 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65907.peg.2514 CDS gi|333352004|gb|AFIZ01000003.1| 40682 40119 -2 - 564 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.65907.peg.2515 CDS gi|333352004|gb|AFIZ01000003.1| 41783 40722 -2 - 1062 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65907.peg.2516 CDS gi|333352004|gb|AFIZ01000003.1| 42430 41786 -1 - 645 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65907.peg.2517 CDS gi|333352004|gb|AFIZ01000003.1| 42990 42427 -3 - 564 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65907.peg.2518 CDS gi|333352004|gb|AFIZ01000003.1| 43125 43547 3 + 423 hypothetical membrane protein - none -
fig|6666666.65907.peg.2519 CDS gi|333352004|gb|AFIZ01000003.1| 44316 43564 -3 - 753 FIG000859: hypothetical protein - none -
fig|6666666.65907.peg.2520 CDS gi|333352004|gb|AFIZ01000003.1| 45009 44389 -3 - 621 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65907.peg.2521 CDS gi|333352004|gb|AFIZ01000003.1| 45914 45006 -2 - 909 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.65907.peg.2522 CDS gi|333352004|gb|AFIZ01000003.1| 46830 45922 -3 - 909 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65907.peg.2523 CDS gi|333352004|gb|AFIZ01000003.1| 47407 46931 -1 - 477 FIG053954: Probable conserved membrane protein - none -
fig|6666666.65907.peg.2524 CDS gi|333352004|gb|AFIZ01000003.1| 48561 47404 -3 - 1158 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.65907.peg.2525 CDS gi|333352004|gb|AFIZ01000003.1| 49544 48558 -2 - 987 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.65907.peg.2526 CDS gi|333352004|gb|AFIZ01000003.1| 50220 49552 -3 - 669 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.2527 CDS gi|333352004|gb|AFIZ01000003.1| 50822 50220 -2 - 603 FIG049476: HIT family protein - none -
fig|6666666.65907.peg.2528 CDS gi|333352004|gb|AFIZ01000003.1| 52875 50806 -3 - 2070 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.65907.peg.2529 CDS gi|333352004|gb|AFIZ01000003.1| 54230 52962 -2 - 1269 Dyp-type peroxidase family protein - none -
fig|6666666.65907.peg.2530 CDS gi|333352004|gb|AFIZ01000003.1| 54900 54217 -3 - 684 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65907.peg.2531 CDS gi|333352004|gb|AFIZ01000003.1| 55531 54941 -1 - 591 Copper resistance protein CopC Copper Transport System;
Copper homeostasis
fig|6666666.65907.peg.2532 CDS gi|333352004|gb|AFIZ01000003.1| 58137 59495 3 + 1359 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65907.peg.2533 CDS gi|333352004|gb|AFIZ01000003.1| 59488 59967 1 + 480 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65907.peg.2534 CDS gi|333352004|gb|AFIZ01000003.1| 60733 60017 -1 - 717 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.2535 CDS gi|333352004|gb|AFIZ01000003.1| 62221 60809 -1 - 1413 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.2536 CDS gi|333352004|gb|AFIZ01000003.1| 63336 62218 -3 - 1119 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65907.peg.2537 CDS gi|333352004|gb|AFIZ01000003.1| 63439 64107 1 + 669 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65907.peg.2538 CDS gi|333352004|gb|AFIZ01000003.1| 64104 65405 3 + 1302 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.65907.peg.2539 CDS gi|333352004|gb|AFIZ01000003.1| 67254 65359 -3 - 1896 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65907.peg.2540 CDS gi|333352004|gb|AFIZ01000003.1| 68644 67331 -1 - 1314 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.65907.peg.2541 CDS gi|333352004|gb|AFIZ01000003.1| 69390 68641 -3 - 750 PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH PROTEIN - none -
fig|6666666.65907.peg.2542 CDS gi|333352004|gb|AFIZ01000003.1| 70376 69387 -2 - 990 FIG00545882: hypothetical protein - none -
fig|6666666.65907.peg.2543 CDS gi|333352004|gb|AFIZ01000003.1| 70885 70424 -1 - 462 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65907.peg.2544 CDS gi|333352004|gb|AFIZ01000003.1| 70952 71476 2 + 525 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65907.peg.2545 CDS gi|333352004|gb|AFIZ01000003.1| 71877 71578 -3 - 300 FIG00545109: hypothetical protein - none -
fig|6666666.65907.peg.2546 CDS gi|333352004|gb|AFIZ01000003.1| 73018 72083 -1 - 936 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.65907.peg.2547 CDS gi|333352004|gb|AFIZ01000003.1| 73048 73830 1 + 783 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65907.peg.2548 CDS gi|333352004|gb|AFIZ01000003.1| 73970 75589 2 + 1620 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65907.peg.2549 CDS gi|333352004|gb|AFIZ01000003.1| 76043 75792 -2 - 252 hypothetical protein - none -
fig|6666666.65907.peg.2550 CDS gi|333352004|gb|AFIZ01000003.1| 78053 76293 -2 - 1761 DNA or RNA helicases of superfamily II - none -
fig|6666666.65907.peg.2551 CDS gi|333352004|gb|AFIZ01000003.1| 78292 78050 -1 - 243 FIG00544358: hypothetical protein - none -
fig|6666666.65907.peg.2552 CDS gi|333352004|gb|AFIZ01000003.1| 78387 78938 3 + 552 FIG00545207: hypothetical protein - none -
fig|6666666.65907.peg.2553 CDS gi|333352004|gb|AFIZ01000003.1| 78935 80539 2 + 1605 Putative transferase - none -
fig|6666666.65907.peg.2554 CDS gi|333352004|gb|AFIZ01000003.1| 80536 81039 1 + 504 D-tyrosyl-tRNA(Tyr) deacylase CBSS-342610.3.peg.283;
D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65907.peg.2555 CDS gi|333352004|gb|AFIZ01000003.1| 81245 82510 2 + 1266 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65907.peg.2556 CDS gi|333352004|gb|AFIZ01000003.1| 82664 83350 2 + 687 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65907.peg.2557 CDS gi|333352004|gb|AFIZ01000003.1| 83358 84356 3 + 999 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.65907.peg.2558 CDS gi|333352004|gb|AFIZ01000003.1| 85698 84313 -3 - 1386 hypothetical protein - none -
fig|6666666.65907.peg.2559 CDS gi|333352004|gb|AFIZ01000003.1| 85861 86916 1 + 1056 hypothetical protein - none -
fig|6666666.65907.peg.2560 CDS gi|333352004|gb|AFIZ01000003.1| 86949 89531 3 + 2583 putative helicase - none -
fig|6666666.65907.peg.2561 CDS gi|333352004|gb|AFIZ01000003.1| 90789 89755 -3 - 1035 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65907.peg.2562 CDS gi|333352004|gb|AFIZ01000003.1| 90986 91582 2 + 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.65907.peg.2563 CDS gi|333352004|gb|AFIZ01000003.1| 91582 92106 1 + 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.65907.peg.2564 CDS gi|333352004|gb|AFIZ01000003.1| 92288 96388 2 + 4101 ATP-dependent helicase HrpA - none -
fig|6666666.65907.peg.2565 CDS gi|333352004|gb|AFIZ01000003.1| 96939 96421 -3 - 519 Ribonucleotide reductase transcriptional regulator NrdR - none -
fig|6666666.65907.peg.2566 CDS gi|333352004|gb|AFIZ01000003.1| 97627 97025 -1 - 603 hypothetical protein - none -
fig|6666666.65907.peg.2567 CDS gi|333352004|gb|AFIZ01000003.1| 97923 98699 3 + 777 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65907.peg.2568 CDS gi|333352004|gb|AFIZ01000003.1| 100808 99075 -2 - 1734 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.65907.peg.2569 CDS gi|333352004|gb|AFIZ01000003.1| 100984 101763 1 + 780 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65907.peg.2570 CDS gi|333352004|gb|AFIZ01000003.1| 101884 102150 1 + 267 Phosphocarrier protein of PTS system - none -
fig|6666666.65907.peg.2571 CDS gi|333352004|gb|AFIZ01000003.1| 103559 102192 -2 - 1368 xanthine/uracil permeases - none -
fig|6666666.65907.peg.2572 CDS gi|333352004|gb|AFIZ01000003.1| 105087 103594 -3 - 1494 GTP-binding protein HflX Hfl operon
fig|6666666.65907.peg.2573 CDS gi|333352004|gb|AFIZ01000003.1| 105123 105926 3 + 804 FIG00546075: hypothetical protein - none -
fig|6666666.65907.peg.2574 CDS gi|333352004|gb|AFIZ01000003.1| 106967 106086 -2 - 882 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65907.peg.2575 CDS gi|333352004|gb|AFIZ01000003.1| 107930 106971 -2 - 960 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.65907.peg.2576 CDS gi|333352004|gb|AFIZ01000003.1| 108244 109485 1 + 1242 ATPase involved in DNA repair - none -
fig|6666666.65907.peg.2577 CDS gi|333352004|gb|AFIZ01000003.1| 110291 109473 -2 - 819 Putative membrane protein - none -
fig|6666666.65907.peg.2578 CDS gi|333352004|gb|AFIZ01000003.1| 111822 110284 -3 - 1539 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.65907.peg.2579 CDS gi|333352004|gb|AFIZ01000003.1| 112051 111851 -1 - 201 hypothetical protein - none -
fig|6666666.65907.peg.2580 CDS gi|333352004|gb|AFIZ01000003.1| 112055 112783 2 + 729 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.65907.peg.2581 CDS gi|333352004|gb|AFIZ01000003.1| 112796 113704 2 + 909 glutamate-binding protein GluB - none -
fig|6666666.65907.peg.2582 CDS gi|333352004|gb|AFIZ01000003.1| 113713 114414 1 + 702 glutamate ABC-type transporter, permease component - none -
fig|6666666.65907.peg.2583 CDS gi|333352004|gb|AFIZ01000003.1| 114414 115358 3 + 945 Glutamate transport system permease protein gluD - none -
fig|6666666.65907.peg.2584 CDS gi|333352004|gb|AFIZ01000003.1| 115990 115373 -1 - 618 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65907.peg.2585 CDS gi|333352004|gb|AFIZ01000003.1| 117148 115994 -1 - 1155 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65907.peg.2586 CDS gi|333352004|gb|AFIZ01000003.1| 117504 117298 -3 - 207 hypothetical protein - none -
fig|6666666.65907.peg.2587 CDS gi|333352004|gb|AFIZ01000003.1| 117503 117625 2 + 123 hypothetical protein - none -
fig|6666666.65907.peg.2588 CDS gi|333352004|gb|AFIZ01000003.1| 117579 118250 3 + 672 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65907.peg.2589 CDS gi|333352004|gb|AFIZ01000003.1| 118251 118934 3 + 684 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65907.peg.2590 CDS gi|333352004|gb|AFIZ01000003.1| 120439 118907 -1 - 1533 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65907.peg.2591 CDS gi|333352004|gb|AFIZ01000003.1| 120899 120483 -2 - 417 putative transcription regulator - none -
fig|6666666.65907.peg.2592 CDS gi|333352004|gb|AFIZ01000003.1| 121623 121030 -3 - 594 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2593 CDS gi|333352004|gb|AFIZ01000003.1| 122270 121620 -2 - 651 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65907.peg.2594 CDS gi|333352004|gb|AFIZ01000003.1| 123401 122361 -2 - 1041 Integral membrane protein TerC - none -
fig|6666666.65907.peg.2595 CDS gi|333352004|gb|AFIZ01000003.1| 123400 123516 1 + 117 hypothetical protein - none -
fig|6666666.65907.peg.2596 CDS gi|333352004|gb|AFIZ01000003.1| 124581 123634 -3 - 948 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65907.peg.2597 CDS gi|333352005|gb|AFIZ01000002.1| 13 1236 1 + 1224 hypothetical protein - none -
fig|6666666.65907.peg.2598 CDS gi|333352005|gb|AFIZ01000002.1| 1430 2083 2 + 654 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65907.peg.2599 CDS gi|333352005|gb|AFIZ01000002.1| 2080 3327 1 + 1248 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65907.peg.2600 CDS gi|333352005|gb|AFIZ01000002.1| 3337 3819 1 + 483 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2601 CDS gi|333352005|gb|AFIZ01000002.1| 3879 4370 3 + 492 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65907.peg.2602 CDS gi|333352005|gb|AFIZ01000002.1| 4384 6435 1 + 2052 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65907.peg.2603 CDS gi|333352005|gb|AFIZ01000002.1| 6446 7378 2 + 933 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.65907.peg.2604 CDS gi|333352005|gb|AFIZ01000002.1| 7375 8436 1 + 1062 Hypothetical protein UPF0052 - none -
fig|6666666.65907.peg.2605 CDS gi|333352005|gb|AFIZ01000002.1| 8420 9436 2 + 1017 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65907.peg.2606 CDS gi|333352005|gb|AFIZ01000002.1| 9485 10492 2 + 1008 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65907.peg.2607 CDS gi|333352005|gb|AFIZ01000002.1| 10591 11802 1 + 1212 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65907.peg.2608 CDS gi|333352005|gb|AFIZ01000002.1| 11814 12605 3 + 792 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65907.peg.2609 CDS gi|333352005|gb|AFIZ01000002.1| 12621 15461 3 + 2841 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65907.peg.2610 CDS gi|333352005|gb|AFIZ01000002.1| 15518 15754 2 + 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65907.peg.2611 CDS gi|333352005|gb|AFIZ01000002.1| 16566 15751 -3 - 816 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65907.peg.2612 CDS gi|333352005|gb|AFIZ01000002.1| 17612 16563 -2 - 1050 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65907.peg.2613 CDS gi|333352005|gb|AFIZ01000002.1| 19132 17609 -1 - 1524 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65907.peg.2614 CDS gi|333352005|gb|AFIZ01000002.1| 20241 19129 -3 - 1113 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.65907.peg.2615 CDS gi|333352005|gb|AFIZ01000002.1| 22358 20277 -2 - 2082 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65907.peg.2616 CDS gi|333352005|gb|AFIZ01000002.1| 22317 22442 3 + 126 hypothetical protein - none -
fig|6666666.65907.peg.2617 CDS gi|333352005|gb|AFIZ01000002.1| 22619 23545 2 + 927 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65907.peg.2618 CDS gi|333352005|gb|AFIZ01000002.1| 24940 23822 -1 - 1119 Cytochrome oxidase assembly protein - none -
fig|6666666.65907.peg.2619 CDS gi|333352005|gb|AFIZ01000002.1| 25752 24952 -3 - 801 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65907.peg.2620 CDS gi|333352005|gb|AFIZ01000002.1| 26684 25749 -2 - 936 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65907.peg.2621 CDS gi|333352005|gb|AFIZ01000002.1| 28402 26696 -1 - 1707 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65907.peg.2622 CDS gi|333352005|gb|AFIZ01000002.1| 28382 28624 2 + 243 hypothetical protein - none -
fig|6666666.65907.peg.2623 CDS gi|333352005|gb|AFIZ01000002.1| 28611 29279 3 + 669 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65907.peg.2624 CDS gi|333352005|gb|AFIZ01000002.1| 29283 30764 3 + 1482 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65907.peg.2625 CDS gi|333352005|gb|AFIZ01000002.1| 30768 31943 3 + 1176 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65907.peg.2626 CDS gi|333352005|gb|AFIZ01000002.1| 31975 32739 1 + 765 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65907.peg.2627 CDS gi|333352005|gb|AFIZ01000002.1| 32736 33995 3 + 1260 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria
fig|6666666.65907.peg.2628 CDS gi|333352005|gb|AFIZ01000002.1| 34028 34501 2 + 474 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65907.peg.2629 CDS gi|333352005|gb|AFIZ01000002.1| 34498 34923 1 + 426 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65907.peg.2630 CDS gi|333352005|gb|AFIZ01000002.1| 36043 34913 -1 - 1131 putative lycopene cyclase - none -
fig|6666666.65907.peg.2631 CDS gi|333352005|gb|AFIZ01000002.1| 36439 36314 -1 - 126 hypothetical protein - none -
fig|6666666.65907.peg.2632 CDS gi|333352005|gb|AFIZ01000002.1| 36512 38110 2 + 1599 ABC transporter ATP-binding protein - none -
fig|6666666.65907.peg.2633 CDS gi|333352005|gb|AFIZ01000002.1| 38283 39545 3 + 1263 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.65907.peg.2634 CDS gi|333352005|gb|AFIZ01000002.1| 40943 39573 -2 - 1371 FIG00848225: hypothetical protein - none -
fig|6666666.65907.peg.2635 CDS gi|333352005|gb|AFIZ01000002.1| 41223 40957 -3 - 267 ACT domain protein - none -
fig|6666666.65907.peg.2636 CDS gi|333352005|gb|AFIZ01000002.1| 41886 41323 -3 - 564 Transcriptional regulator, TetR family - none -
fig|6666666.65907.peg.2637 CDS gi|333352005|gb|AFIZ01000002.1| 44732 41919 -2 - 2814 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65907.peg.2638 CDS gi|333352005|gb|AFIZ01000002.1| 44775 44900 3 + 126 hypothetical protein - none -
fig|6666666.65907.peg.2639 CDS gi|333352005|gb|AFIZ01000002.1| 45643 47574 1 + 1932 hypothetical protein - none -
fig|6666666.65907.peg.2640 CDS gi|333352005|gb|AFIZ01000002.1| 48439 47600 -1 - 840 hypothetical protein - none -
fig|6666666.65907.peg.2641 CDS gi|333352005|gb|AFIZ01000002.1| 48641 49354 2 + 714 hypothetical protein - none -
fig|6666666.65907.peg.2642 CDS gi|333352005|gb|AFIZ01000002.1| 49379 49816 2 + 438 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.65907.peg.2643 CDS gi|333352005|gb|AFIZ01000002.1| 49822 51042 1 + 1221 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65907.peg.2644 CDS gi|333352005|gb|AFIZ01000002.1| 52298 51579 -2 - 720 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.65907.peg.2645 CDS gi|333352005|gb|AFIZ01000002.1| 52643 53200 2 + 558 Phospholipid-binding protein - none -
fig|6666666.65907.peg.2646 CDS gi|333352005|gb|AFIZ01000002.1| 54373 53225 -1 - 1149 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.65907.peg.2647 CDS gi|333352005|gb|AFIZ01000002.1| 55440 54370 -3 - 1071 hypothetical protein - none -
fig|6666666.65907.peg.2648 CDS gi|333352005|gb|AFIZ01000002.1| 55474 56322 1 + 849 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65907.peg.2649 CDS gi|333352005|gb|AFIZ01000002.1| 56346 57620 3 + 1275 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65907.peg.2650 CDS gi|333352005|gb|AFIZ01000002.1| 57617 58015 2 + 399 hypothetical protein - none -
fig|6666666.65907.peg.2651 CDS gi|333352005|gb|AFIZ01000002.1| 58820 57999 -2 - 822 TesB-like acyl-CoA thioesterase 5 Acyl-CoA thioesterase II
fig|6666666.65907.peg.2652 CDS gi|333352005|gb|AFIZ01000002.1| 58857 59492 3 + 636 hypothetical protein - none -
fig|6666666.65907.peg.2653 CDS gi|333352005|gb|AFIZ01000002.1| 59498 59761 2 + 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2654 CDS gi|333352005|gb|AFIZ01000002.1| 59784 60641 3 + 858 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2655 CDS gi|333352005|gb|AFIZ01000002.1| 60688 62262 1 + 1575 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65907.peg.2656 CDS gi|333352005|gb|AFIZ01000002.1| 62416 63348 1 + 933 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65907.peg.2657 CDS gi|333352005|gb|AFIZ01000002.1| 64253 64134 -2 - 120 hypothetical protein - none -
fig|6666666.65907.peg.2658 CDS gi|333352005|gb|AFIZ01000002.1| 64986 65807 3 + 822 hypothetical protein - none -
fig|6666666.65907.peg.2659 CDS gi|333352005|gb|AFIZ01000002.1| 66890 66072 -2 - 819 RecB family exonuclease - none -
fig|6666666.65907.peg.2660 CDS gi|333352005|gb|AFIZ01000002.1| 68269 66887 -1 - 1383 COG0277: FAD/FMN-containing dehydrogenases - none -
fig|6666666.65907.peg.2661 CDS gi|333352005|gb|AFIZ01000002.1| 69662 68262 -2 - 1401 COG0277: FAD/FMN-containing dehydrogenases - none -
fig|6666666.65907.peg.2662 CDS gi|333352005|gb|AFIZ01000002.1| 71038 69659 -1 - 1380 COG0277: FAD/FMN-containing dehydrogenases - none -
fig|6666666.65907.peg.2663 CDS gi|333352005|gb|AFIZ01000002.1| 71746 71069 -1 - 678 hypothetical protein - none -
fig|6666666.65907.peg.2664 CDS gi|333352005|gb|AFIZ01000002.1| 71763 73934 3 + 2172 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.65907.peg.2665 CDS gi|333352005|gb|AFIZ01000002.1| 74096 74932 2 + 837 Protein-L-isoaspartate methyltransferase (EC 2.1.1.77) - none -
fig|6666666.65907.peg.2666 CDS gi|333352005|gb|AFIZ01000002.1| 75042 76676 3 + 1635 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65907.peg.2667 CDS gi|333352005|gb|AFIZ01000002.1| 76673 78199 2 + 1527 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65907.peg.2668 CDS gi|333352005|gb|AFIZ01000002.1| 78240 78440 3 + 201 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65907.peg.2669 CDS gi|333352005|gb|AFIZ01000002.1| 78437 79900 2 + 1464 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65907.peg.2670 CDS gi|333352005|gb|AFIZ01000002.1| 79904 80950 2 + 1047 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65907.peg.2671 CDS gi|333352005|gb|AFIZ01000002.1| 80947 81999 1 + 1053 hypothetical protein - none -
fig|6666666.65907.peg.2672 CDS gi|333352005|gb|AFIZ01000002.1| 82058 82309 2 + 252 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65907.peg.2673 CDS gi|333352005|gb|AFIZ01000002.1| 82411 83346 1 + 936 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65907.peg.2674 CDS gi|333352005|gb|AFIZ01000002.1| 83333 86023 2 + 2691 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65907.peg.2675 CDS gi|333352005|gb|AFIZ01000002.1| 86055 87191 3 + 1137 probable metallopeptidase - none -
fig|6666666.65907.peg.2676 CDS gi|333352005|gb|AFIZ01000002.1| 87188 87919 2 + 732 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65907.peg.2677 CDS gi|333352005|gb|AFIZ01000002.1| 88051 87932 -1 - 120 hypothetical protein - none -
fig|6666666.65907.peg.2678 CDS gi|333352005|gb|AFIZ01000002.1| 88384 88058 -1 - 327 hypothetical protein - none -
fig|6666666.65907.peg.2679 CDS gi|333352005|gb|AFIZ01000002.1| 88429 88899 1 + 471 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65907.peg.2680 CDS gi|333352005|gb|AFIZ01000002.1| 88920 90491 3 + 1572 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65907.peg.2681 CDS gi|333352005|gb|AFIZ01000002.1| 90488 91309 2 + 822 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65907.peg.2682 CDS gi|333352005|gb|AFIZ01000002.1| 91781 91404 -2 - 378 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65907.peg.2683 CDS gi|333352005|gb|AFIZ01000002.1| 91856 92224 2 + 369 hypothetical protein - none -
fig|6666666.65907.peg.2684 CDS gi|333352005|gb|AFIZ01000002.1| 92279 92962 2 + 684 Putative secreted protein - none -
fig|6666666.65907.peg.2685 CDS gi|333352005|gb|AFIZ01000002.1| 93002 93187 2 + 186 hypothetical protein - none -
fig|6666666.65907.peg.2686 CDS gi|333352005|gb|AFIZ01000002.1| 93194 94495 2 + 1302 Magnesium transporter - none -
fig|6666666.65907.peg.2687 CDS gi|333352005|gb|AFIZ01000002.1| 94503 96743 3 + 2241 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65907.peg.2688 CDS gi|333352005|gb|AFIZ01000002.1| 97281 96730 -3 - 552 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65907.peg.2689 CDS gi|333352005|gb|AFIZ01000002.1| 98181 97702 -3 - 480 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65907.peg.2690 CDS gi|333352005|gb|AFIZ01000002.1| 98525 98175 -2 - 351 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.65907.peg.2691 CDS gi|333352005|gb|AFIZ01000002.1| 98670 99200 3 + 531 hypothetical protein - none -
fig|6666666.65907.peg.2692 CDS gi|333352005|gb|AFIZ01000002.1| 99265 100458 1 + 1194 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Serine-glyoxylate cycle
fig|6666666.65907.peg.2693 CDS gi|333352005|gb|AFIZ01000002.1| 100459 100764 1 + 306 Conserved protein - none -
fig|6666666.65907.peg.2694 CDS gi|333352005|gb|AFIZ01000002.1| 101147 100779 -2 - 369 hypothetical protein - none -
fig|6666666.65907.peg.2695 CDS gi|333352005|gb|AFIZ01000002.1| 102505 101216 -1 - 1290 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases
fig|6666666.65907.peg.2696 CDS gi|333352005|gb|AFIZ01000002.1| 103512 102502 -3 - 1011 hypothetical protein - none -
fig|6666666.65907.peg.2697 CDS gi|333352005|gb|AFIZ01000002.1| 104212 103607 -1 - 606 hypothetical protein - none -
fig|6666666.65907.peg.2698 CDS gi|333352005|gb|AFIZ01000002.1| 105025 104261 -1 - 765 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) (EC 3.2.1.17) - none -
fig|6666666.65907.peg.2699 CDS gi|333352005|gb|AFIZ01000002.1| 105935 105096 -2 - 840 hypothetical protein - none -
fig|6666666.65907.peg.2700 CDS gi|333352005|gb|AFIZ01000002.1| 106710 105937 -3 - 774 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65907.peg.2701 CDS gi|333352005|gb|AFIZ01000002.1| 106765 108645 1 + 1881 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65907.peg.2702 CDS gi|333352005|gb|AFIZ01000002.1| 108666 109205 3 + 540 hypothetical protein - none -
fig|6666666.65907.peg.2703 CDS gi|333352005|gb|AFIZ01000002.1| 109202 110029 2 + 828 Hydrolase (HAD superfamily) - none -
fig|6666666.65907.peg.2704 CDS gi|333352005|gb|AFIZ01000002.1| 110124 110594 3 + 471 hypothetical protein - none -
fig|6666666.65907.peg.2705 CDS gi|333352005|gb|AFIZ01000002.1| 110700 111503 3 + 804 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.65907.peg.2706 CDS gi|333352005|gb|AFIZ01000002.1| 113262 111532 -3 - 1731 Glycine-rich cell wall structural protein 1 precursor - none -
fig|6666666.65907.peg.2707 CDS gi|333352005|gb|AFIZ01000002.1| 115092 114235 -3 - 858 hypothetical protein - none -
fig|6666666.65907.peg.2708 CDS gi|333352005|gb|AFIZ01000002.1| 115091 117064 2 + 1974 FIG00545242: hypothetical protein - none -
fig|6666666.65907.peg.2709 CDS gi|333352005|gb|AFIZ01000002.1| 117197 118279 2 + 1083 conserved hypothetical protein - none -
fig|6666666.65907.peg.2710 CDS gi|333352005|gb|AFIZ01000002.1| 118321 121182 1 + 2862 hypothetical protein - none -
fig|6666666.65907.peg.2711 CDS gi|333352005|gb|AFIZ01000002.1| 122509 121187 -1 - 1323 hypothetical protein - none -
fig|6666666.65907.peg.2712 CDS gi|333352005|gb|AFIZ01000002.1| 122548 123336 1 + 789 hypothetical protein - none -
fig|6666666.65907.peg.2713 CDS gi|333352005|gb|AFIZ01000002.1| 124897 123386 -1 - 1512 hypothetical protein - none -
fig|6666666.65907.peg.2714 CDS gi|333352005|gb|AFIZ01000002.1| 124943 125152 2 + 210 hypothetical protein - none -
fig|6666666.65907.peg.2715 CDS gi|333352005|gb|AFIZ01000002.1| 126271 125204 -1 - 1068 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2716 CDS gi|333352005|gb|AFIZ01000002.1| 126960 126274 -3 - 687 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2717 CDS gi|333352005|gb|AFIZ01000002.1| 127489 126974 -1 - 516 hypothetical protein - none -
fig|6666666.65907.peg.2718 CDS gi|333352005|gb|AFIZ01000002.1| 129092 127524 -2 - 1569 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.65907.peg.2719 CDS gi|333352005|gb|AFIZ01000002.1| 130105 129092 -1 - 1014 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.65907.peg.2720 CDS gi|333352005|gb|AFIZ01000002.1| 130590 130090 -3 - 501 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65907.peg.2721 CDS gi|333352005|gb|AFIZ01000002.1| 132645 130615 -3 - 2031 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65907.peg.2722 CDS gi|333352005|gb|AFIZ01000002.1| 133889 132660 -2 - 1230 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65907.peg.2723 CDS gi|333352005|gb|AFIZ01000002.1| 135240 133975 -3 - 1266 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65907.peg.2724 CDS gi|333352005|gb|AFIZ01000002.1| 135643 135344 -1 - 300 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65907.peg.2725 CDS gi|333352005|gb|AFIZ01000002.1| 136273 135680 -1 - 594 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65907.peg.2726 CDS gi|333352005|gb|AFIZ01000002.1| 136599 136279 -3 - 321 integration host factor - none -
fig|6666666.65907.peg.2727 CDS gi|333352005|gb|AFIZ01000002.1| 137611 136757 -1 - 855 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2728 CDS gi|333352005|gb|AFIZ01000002.1| 140942 137598 -2 - 3345 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65907.peg.2729 CDS gi|333352005|gb|AFIZ01000002.1| 142106 140943 -2 - 1164 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65907.peg.2730 CDS gi|333352005|gb|AFIZ01000002.1| 143501 142137 -2 - 1365 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.65907.peg.2731 CDS gi|333352005|gb|AFIZ01000002.1| 144466 143498 -1 - 969 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.65907.peg.2732 CDS gi|333352005|gb|AFIZ01000002.1| 145041 144463 -3 - 579 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.65907.peg.2733 CDS gi|333352005|gb|AFIZ01000002.1| 145856 145236 -2 - 621 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65907.peg.2734 CDS gi|333352005|gb|AFIZ01000002.1| 146439 145876 -3 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65907.peg.2735 CDS gi|333352005|gb|AFIZ01000002.1| 147591 146512 -3 - 1080 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65907.peg.2736 CDS gi|333352006|gb|AFIZ01000001.1| 368 1570 2 + 1203 TPR-repeat-containing protein - none -
fig|6666666.65907.peg.2737 CDS gi|333352006|gb|AFIZ01000001.1| 1584 2585 3 + 1002 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65907.peg.2738 CDS gi|333352006|gb|AFIZ01000001.1| 2582 2770 2 + 189 hypothetical protein - none -
fig|6666666.65907.peg.2739 CDS gi|333352006|gb|AFIZ01000001.1| 2771 3604 2 + 834 RNA binding methyltransferase FtsJ like - none -
fig|6666666.65907.peg.2740 CDS gi|333352006|gb|AFIZ01000001.1| 3601 4545 1 + 945 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.65907.peg.2741 CDS gi|333352006|gb|AFIZ01000001.1| 4612 6324 1 + 1713 DNA repair protein RecN DNA repair, bacterial
fig|6666666.65907.peg.2742 CDS gi|333352006|gb|AFIZ01000001.1| 6326 7213 2 + 888 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65907.peg.2743 CDS gi|333352006|gb|AFIZ01000001.1| 7320 7454 3 + 135 hypothetical protein - none -
fig|6666666.65907.peg.2744 CDS gi|333352006|gb|AFIZ01000001.1| 7516 8694 1 + 1179 FIG005773: conserved membrane protein ML1361 - none -
fig|6666666.65907.peg.2745 CDS gi|333352006|gb|AFIZ01000001.1| 8712 9620 3 + 909 hypothetical protein - none -
fig|6666666.65907.peg.2746 CDS gi|333352006|gb|AFIZ01000001.1| 9682 11346 1 + 1665 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.65907.peg.2747 CDS gi|333352006|gb|AFIZ01000001.1| 11343 11990 3 + 648 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65907.peg.2748 CDS gi|333352006|gb|AFIZ01000001.1| 11980 12918 1 + 939 Tyrosine recombinase XerD - none -
fig|6666666.65907.peg.2749 CDS gi|333352006|gb|AFIZ01000001.1| 13041 13916 3 + 876 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65907.peg.2750 CDS gi|333352006|gb|AFIZ01000001.1| 13921 14748 1 + 828 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65907.peg.2751 CDS gi|333352006|gb|AFIZ01000001.1| 14761 15309 1 + 549 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65907.peg.2752 CDS gi|333352006|gb|AFIZ01000001.1| 16241 15321 -2 - 921 hypothetical protein - none -
fig|6666666.65907.peg.2753 CDS gi|333352006|gb|AFIZ01000001.1| 16327 17262 1 + 936 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65907.peg.2754 CDS gi|333352006|gb|AFIZ01000001.1| 17274 18029 3 + 756 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65907.peg.2755 CDS gi|333352006|gb|AFIZ01000001.1| 18026 19660 2 + 1635 GTP-binding protein EngA - none -
fig|6666666.65907.peg.2756 CDS gi|333352006|gb|AFIZ01000001.1| 19877 20416 2 + 540 hypothetical protein - none -
fig|6666666.65907.peg.2757 CDS gi|333352006|gb|AFIZ01000001.1| 20544 21833 3 + 1290 Dicarboxylate MFS transporter - none -
fig|6666666.65907.peg.2758 CDS gi|333352006|gb|AFIZ01000001.1| 21925 22146 1 + 222 YpkF - none -
fig|6666666.65907.peg.2759 CDS gi|333352006|gb|AFIZ01000001.1| 22381 22818 1 + 438 cell filamentation protein - none -
fig|6666666.65907.peg.2760 CDS gi|333352006|gb|AFIZ01000001.1| 22938 22825 -3 - 114 hypothetical protein - none -
fig|6666666.65907.peg.2761 CDS gi|333352006|gb|AFIZ01000001.1| 23532 23669 3 + 138 hypothetical protein - none -
fig|6666666.65907.peg.2762 CDS gi|333352006|gb|AFIZ01000001.1| 23978 23736 -2 - 243 hypothetical protein - none -
fig|6666666.65907.peg.2763 CDS gi|333352006|gb|AFIZ01000001.1| 24228 23992 -3 - 237 hypothetical protein - none -
fig|6666666.65907.peg.2764 CDS gi|333352006|gb|AFIZ01000001.1| 25495 24488 -1 - 1008 Homocysteine S-methyltransferase (EC 2.1.1.10) Methionine Biosynthesis;
S-methylmethionine
fig|6666666.65907.peg.2765 CDS gi|333352006|gb|AFIZ01000001.1| 25514 26962 2 + 1449 Arginine permease RocE - none -
fig|6666666.65907.peg.2766 CDS gi|333352006|gb|AFIZ01000001.1| 28459 26969 -1 - 1491 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.65907.peg.2767 CDS gi|333352006|gb|AFIZ01000001.1| 28511 29839 2 + 1329 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.65907.peg.2769 CDS gi|333352006|gb|AFIZ01000001.1| 31232 30732 -2 - 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.65907.peg.2770 CDS gi|333352006|gb|AFIZ01000001.1| 32060 31239 -2 - 822 Bll2902 protein - none -
fig|6666666.65907.peg.2771 CDS gi|333352006|gb|AFIZ01000001.1| 32164 34497 1 + 2334 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65907.peg.2772 CDS gi|333352006|gb|AFIZ01000001.1| 34636 35070 1 + 435 FHA-domain-containing proteins - none -
fig|6666666.65907.peg.2773 CDS gi|333352006|gb|AFIZ01000001.1| 35108 35851 2 + 744 FIG00545122: hypothetical protein - none -
fig|6666666.65907.peg.2774 CDS gi|333352006|gb|AFIZ01000001.1| 36058 36603 1 + 546 FIG00544641: hypothetical protein - none -
fig|6666666.65907.peg.2775 CDS gi|333352006|gb|AFIZ01000001.1| 37073 36600 -2 - 474 hypothetical protein - none -
fig|6666666.65907.peg.2776 CDS gi|333352006|gb|AFIZ01000001.1| 38025 37117 -3 - 909 FIG00545058: hypothetical protein - none -
fig|6666666.65907.peg.2777 CDS gi|333352006|gb|AFIZ01000001.1| 39097 38042 -1 - 1056 FIG00546228: hypothetical protein - none -
fig|6666666.65907.peg.2778 CDS gi|333352006|gb|AFIZ01000001.1| 40487 39090 -2 - 1398 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.65907.peg.2779 CDS gi|333352006|gb|AFIZ01000001.1| 41747 40494 -2 - 1254 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65907.peg.2780 CDS gi|333352006|gb|AFIZ01000001.1| 41751 41900 3 + 150 hypothetical protein - none -
fig|6666666.65907.peg.2781 CDS gi|333352006|gb|AFIZ01000001.1| 43505 42057 -2 - 1449 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pentose phosphate pathway
fig|6666666.65907.peg.2782 CDS gi|333352006|gb|AFIZ01000001.1| 43620 44135 3 + 516 ComA operon protein 2 - none -
fig|6666666.65907.peg.2783 CDS gi|333352006|gb|AFIZ01000001.1| 44712 44374 -3 - 339 hypothetical protein - none -
fig|6666666.65907.peg.2784 CDS gi|333352006|gb|AFIZ01000001.1| 46354 44804 -1 - 1551 Phosphomethylpyrimidine kinase (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65907.peg.2785 CDS gi|333352006|gb|AFIZ01000001.1| 47053 46355 -1 - 699 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65907.peg.2786 CDS gi|333352006|gb|AFIZ01000001.1| 47825 47043 -2 - 783 Hydroxyethylthiazole kinase (EC 2.7.1.50) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65907.peg.2787 CDS gi|333352006|gb|AFIZ01000001.1| 49507 48059 -1 - 1449 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65907.peg.2788 CDS gi|333352006|gb|AFIZ01000001.1| 49541 49663 2 + 123 hypothetical protein - none -
fig|6666666.65907.peg.2789 CDS gi|333352006|gb|AFIZ01000001.1| 49807 51066 1 + 1260 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65907.peg.2790 CDS gi|333352006|gb|AFIZ01000001.1| 51722 51081 -2 - 642 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65907.peg.2791 CDS gi|333352006|gb|AFIZ01000001.1| 53228 51873 -2 - 1356 putative transport protein - none -
fig|6666666.65907.peg.2792 CDS gi|333352006|gb|AFIZ01000001.1| 53424 55088 3 + 1665 Fumarate/succinate/L-aspartate dehydrogenases - none -
fig|6666666.65907.peg.2793 CDS gi|333352006|gb|AFIZ01000001.1| 55085 56452 2 + 1368 amidase - none -
fig|6666666.65907.peg.2794 CDS gi|333352006|gb|AFIZ01000001.1| 56958 56449 -3 - 510 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.65907.peg.2795 CDS gi|333352006|gb|AFIZ01000001.1| 57003 57950 3 + 948 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.65907.peg.2796 CDS gi|333352006|gb|AFIZ01000001.1| 59958 57937 -3 - 2022 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65907.rna.1 RNA gi|333351940|gb|AFIZ01000067.1| 1 1018 1 + 1018 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65907.rna.2 RNA gi|333351947|gb|AFIZ01000060.1| 1521 10 -3 - 1512 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65907.rna.3 RNA gi|333351949|gb|AFIZ01000058.1| 195 2053 3 + 1859 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65907.rna.4 RNA gi|333351951|gb|AFIZ01000056.1| 6171 6099 -3 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.65907.rna.5 RNA gi|333351951|gb|AFIZ01000056.1| 6265 6192 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.65907.rna.6 RNA gi|333351952|gb|AFIZ01000055.1| 11997 11913 -3 - 85 tRNA-Ser-TGA - none -
fig|6666666.65907.rna.7 RNA gi|333351957|gb|AFIZ01000050.1| 80810 80883 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.65907.rna.8 RNA gi|333351957|gb|AFIZ01000050.1| 80897 80969 2 + 73 tRNA-Ala-TGC - none -
fig|6666666.65907.rna.9 RNA gi|333351957|gb|AFIZ01000050.1| 94469 94541 2 + 73 tRNA-Ala-CGC tRNAs
fig|6666666.65907.rna.10 RNA gi|333351960|gb|AFIZ01000047.1| 3622 3695 1 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.65907.rna.11 RNA gi|333351960|gb|AFIZ01000047.1| 160613 160541 -2 - 73 tRNA-Val-TAC - none -
fig|6666666.65907.rna.12 RNA gi|333351960|gb|AFIZ01000047.1| 167162 167091 -2 - 72 tRNA-Asn-GTT - none -
fig|6666666.65907.rna.13 RNA gi|333351960|gb|AFIZ01000047.1| 167428 167501 1 + 74 tRNA-Met-CAT - none -
fig|6666666.65907.rna.14 RNA gi|333351962|gb|AFIZ01000045.1| 20907 20979 3 + 73 tRNA-Arg-CCT - none -
fig|6666666.65907.rna.15 RNA gi|333351964|gb|AFIZ01000043.1| 8923 8995 1 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65907.rna.16 RNA gi|333351964|gb|AFIZ01000043.1| 10900 10972 1 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65907.rna.17 RNA gi|333351965|gb|AFIZ01000042.1| 32728 32655 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.65907.rna.18 RNA gi|333351965|gb|AFIZ01000042.1| 32967 32896 -3 - 72 tRNA-Gly-TCC - none -
fig|6666666.65907.rna.19 RNA gi|333351965|gb|AFIZ01000042.1| 48614 48687 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.65907.rna.20 RNA gi|333351965|gb|AFIZ01000042.1| 50963 51035 2 + 73 tRNA-His-GTG - none -
fig|6666666.65907.rna.21 RNA gi|333351965|gb|AFIZ01000042.1| 82286 82358 2 + 73 tRNA-Lys-CTT - none -
fig|6666666.65907.rna.22 RNA gi|333351965|gb|AFIZ01000042.1| 85232 85151 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.65907.rna.23 RNA gi|333351969|gb|AFIZ01000038.1| 4568 4486 -2 - 83 tRNA-Leu-CAG tRNAs
fig|6666666.65907.rna.24 RNA gi|333351975|gb|AFIZ01000032.1| 12610 12683 1 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.65907.rna.25 RNA gi|333351975|gb|AFIZ01000032.1| 81221 81306 2 + 86 tRNA-Pseudo-GGA - none -
fig|6666666.65907.rna.26 RNA gi|333351975|gb|AFIZ01000032.1| 116821 116737 -1 - 85 tRNA-Ser-CGA tRNAs
fig|6666666.65907.rna.27 RNA gi|333351975|gb|AFIZ01000032.1| 128921 128849 -2 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65907.rna.28 RNA gi|333351975|gb|AFIZ01000032.1| 129964 129892 -1 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65907.rna.29 RNA gi|333351975|gb|AFIZ01000032.1| 130235 130147 -2 - 89 tRNA-Pseudo-GCT - none -
fig|6666666.65907.rna.30 RNA gi|333351977|gb|AFIZ01000030.1| 79044 78972 -3 - 73 tRNA-Thr-CGT - none -
fig|6666666.65907.rna.31 RNA gi|333351978|gb|AFIZ01000029.1| 53898 53826 -3 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.65907.rna.32 RNA gi|333351978|gb|AFIZ01000029.1| 54386 54313 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.65907.rna.33 RNA gi|333351978|gb|AFIZ01000029.1| 54515 54443 -2 - 73 tRNA-Thr-GGT - none -
fig|6666666.65907.rna.34 RNA gi|333351978|gb|AFIZ01000029.1| 55212 55131 -3 - 82 tRNA-Tyr-GTA - none -
fig|6666666.65907.rna.35 RNA gi|333351981|gb|AFIZ01000026.1| 419 491 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.65907.rna.36 RNA gi|333351982|gb|AFIZ01000025.1| 6699 6769 3 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.65907.rna.37 RNA gi|333351986|gb|AFIZ01000021.1| 1657 1585 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.65907.rna.38 RNA gi|333351986|gb|AFIZ01000021.1| 89783 89711 -2 - 73 tRNA-Thr-TGT - none -
fig|6666666.65907.rna.39 RNA gi|333351988|gb|AFIZ01000019.1| 37498 37583 1 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.65907.rna.40 RNA gi|333351988|gb|AFIZ01000019.1| 61879 61806 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.65907.rna.41 RNA gi|333351988|gb|AFIZ01000019.1| 61989 61917 -3 - 73 tRNA-Glu-TTC - none -
fig|6666666.65907.rna.42 RNA gi|333351992|gb|AFIZ01000015.1| 9135 9062 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.65907.rna.43 RNA gi|333351994|gb|AFIZ01000013.1| 37255 37182 -1 - 74 tRNA-Leu-TAA - none -
fig|6666666.65907.rna.44 RNA gi|333351994|gb|AFIZ01000013.1| 49519 49589 1 + 71 tRNA-Gln-TTG - none -
fig|6666666.65907.rna.45 RNA gi|333351997|gb|AFIZ01000010.1| 64400 64472 2 + 73 tRNA-Arg-CCG tRNAs
fig|6666666.65907.rna.46 RNA gi|333352000|gb|AFIZ01000007.1| 24022 23950 -1 - 73 tRNA-Glu-CTC - none -
fig|6666666.65907.rna.47 RNA gi|333352000|gb|AFIZ01000007.1| 26265 26193 -3 - 73 tRNA-Glu-CTC - none -
fig|6666666.65907.rna.48 RNA gi|333352000|gb|AFIZ01000007.1| 26361 26290 -3 - 72 tRNA-Gln-CTG - none -
fig|6666666.65907.rna.49 RNA gi|333352000|gb|AFIZ01000007.1| 26464 26392 -1 - 73 tRNA-Glu-CTC - none -
fig|6666666.65907.rna.50 RNA gi|333352000|gb|AFIZ01000007.1| 26560 26489 -1 - 72 tRNA-Gln-CTG - none -
fig|6666666.65907.rna.51 RNA gi|333352004|gb|AFIZ01000003.1| 56292 56220 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65907.rna.52 RNA gi|333352004|gb|AFIZ01000003.1| 56404 56333 -1 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65907.rna.53 RNA gi|333352004|gb|AFIZ01000003.1| 56517 56445 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65907.rna.54 RNA gi|333352004|gb|AFIZ01000003.1| 56629 56558 -1 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65907.rna.55 RNA gi|333352004|gb|AFIZ01000003.1| 56707 56636 -1 - 72 tRNA-Cys-GCA tRNAs
fig|6666666.65907.rna.56 RNA gi|333352004|gb|AFIZ01000003.1| 56849 56777 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65907.rna.57 RNA gi|333352004|gb|AFIZ01000003.1| 57376 57447 1 + 72 tRNA-Val-CAC tRNAs
fig|6666666.65907.rna.58 RNA gi|333352005|gb|AFIZ01000002.1| 52459 52374 -1 - 86 tRNA-Leu-GAG tRNAs
fig|6666666.65907.rna.59 RNA gi|333352006|gb|AFIZ01000001.1| 53 173 2 + 121 5S RNA - none -
fig|6666666.65907.rna.60 RNA gi|333352006|gb|AFIZ01000001.1| 30663 30590 -3 - 74 tRNA-Pro-GGG tRNAs