fig|6666666.65908.peg.1 CDS gi|480983938|gb|AREP01000036.1| 30 1331 3 + 1302 Mobile element protein - none -
fig|6666666.65908.peg.2 CDS gi|480983940|gb|AREP01000035.1| 143 1396 2 + 1254 Transposase - none -
fig|6666666.65908.peg.3 CDS gi|480983940|gb|AREP01000035.1| 1736 1888 2 + 153 hypothetical protein - none -
fig|6666666.65908.peg.4 CDS gi|480983943|gb|AREP01000034.1| 1884 1771 -3 - 114 hypothetical protein - none -
fig|6666666.65908.peg.5 CDS gi|480983943|gb|AREP01000034.1| 3011 1881 -2 - 1131 Mobile element protein - none -
fig|6666666.65908.peg.6 CDS gi|480983946|gb|AREP01000033.1| 331 1551 1 + 1221 hypothetical protein - none -
fig|6666666.65908.peg.7 CDS gi|480983946|gb|AREP01000033.1| 2799 3650 3 + 852 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.65908.peg.8 CDS gi|480983946|gb|AREP01000033.1| 4140 5366 3 + 1227 Type IIs restriction endonuclease - none -
fig|6666666.65908.peg.9 CDS gi|480983946|gb|AREP01000033.1| 5586 5434 -3 - 153 Mobile element protein - none -
fig|6666666.65908.peg.10 CDS gi|480983949|gb|AREP01000032.1| 1801 1034 -1 - 768 transcriptional regulator, MerR family - none -
fig|6666666.65908.peg.11 CDS gi|480983949|gb|AREP01000032.1| 2747 1815 -2 - 933 hypothetical protein - none -
fig|6666666.65908.peg.12 CDS gi|480983949|gb|AREP01000032.1| 4043 7417 2 + 3375 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65908.peg.13 CDS gi|480983949|gb|AREP01000032.1| 7653 7414 -3 - 240 Mobile element protein - none -
fig|6666666.65908.peg.14 CDS gi|480983952|gb|AREP01000031.1| 24 236 3 + 213 Mobile element protein - none -
fig|6666666.65908.peg.15 CDS gi|480983952|gb|AREP01000031.1| 1157 240 -2 - 918 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65908.peg.16 CDS gi|480983952|gb|AREP01000031.1| 2372 1170 -2 - 1203 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65908.peg.17 CDS gi|480983952|gb|AREP01000031.1| 2652 3665 3 + 1014 DNA polymerase III, epsilon subunit - none -
fig|6666666.65908.peg.18 CDS gi|480983952|gb|AREP01000031.1| 4570 3662 -1 - 909 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65908.peg.19 CDS gi|480983952|gb|AREP01000031.1| 5821 4664 -1 - 1158 Protein RtcB - none -
fig|6666666.65908.peg.20 CDS gi|480983952|gb|AREP01000031.1| 6118 6297 1 + 180 hypothetical protein - none -
fig|6666666.65908.peg.21 CDS gi|480983952|gb|AREP01000031.1| 8404 6347 -1 - 2058 hypothetical protein - none -
fig|6666666.65908.peg.22 CDS gi|480983952|gb|AREP01000031.1| 8691 9953 3 + 1263 hypothetical protein - none -
fig|6666666.65908.peg.23 CDS gi|480983952|gb|AREP01000031.1| 10091 10462 2 + 372 FIG00727708: hypothetical protein - none -
fig|6666666.65908.peg.24 CDS gi|480983955|gb|AREP01000030.1| 1324 950 -1 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.65908.peg.25 CDS gi|480983955|gb|AREP01000030.1| 1833 2783 3 + 951 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65908.peg.26 CDS gi|480983955|gb|AREP01000030.1| 3688 2840 -1 - 849 FIG00544174: hypothetical protein - none -
fig|6666666.65908.peg.27 CDS gi|480983955|gb|AREP01000030.1| 4483 4370 -1 - 114 hypothetical protein - none -
fig|6666666.65908.peg.28 CDS gi|480983955|gb|AREP01000030.1| 4803 4558 -3 - 246 hypothetical protein - none -
fig|6666666.65908.peg.29 CDS gi|480983955|gb|AREP01000030.1| 5553 5182 -3 - 372 Thioredoxin - none -
fig|6666666.65908.peg.30 CDS gi|480983955|gb|AREP01000030.1| 5650 5853 1 + 204 hypothetical protein - none -
fig|6666666.65908.peg.31 CDS gi|480983955|gb|AREP01000030.1| 5900 6892 2 + 993 pirin-related protein - none -
fig|6666666.65908.peg.32 CDS gi|480983955|gb|AREP01000030.1| 6961 7161 1 + 201 Copper chaperone Copper homeostasis
fig|6666666.65908.peg.33 CDS gi|480983955|gb|AREP01000030.1| 7151 9457 2 + 2307 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65908.peg.34 CDS gi|480983955|gb|AREP01000030.1| 9861 9484 -3 - 378 Transcriptional regulator, GntR family - none -
fig|6666666.65908.peg.35 CDS gi|480983955|gb|AREP01000030.1| 9969 11291 3 + 1323 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.65908.peg.36 CDS gi|480983955|gb|AREP01000030.1| 11558 11367 -2 - 192 hypothetical protein - none -
fig|6666666.65908.peg.37 CDS gi|480983955|gb|AREP01000030.1| 13223 11766 -2 - 1458 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65908.peg.38 CDS gi|480983955|gb|AREP01000030.1| 14171 13932 -2 - 240 Mobile element protein - none -
fig|6666666.65908.peg.39 CDS gi|480983961|gb|AREP01000029.1| 1219 464 -1 - 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.65908.peg.40 CDS gi|480983961|gb|AREP01000029.1| 2268 1216 -3 - 1053 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.65908.peg.41 CDS gi|480983961|gb|AREP01000029.1| 3271 2261 -1 - 1011 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.65908.peg.42 CDS gi|480983961|gb|AREP01000029.1| 4351 3308 -1 - 1044 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.65908.peg.43 CDS gi|480983961|gb|AREP01000029.1| 4977 4558 -3 - 420 hypothetical protein - none -
fig|6666666.65908.peg.44 CDS gi|480983961|gb|AREP01000029.1| 7783 5069 -1 - 2715 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Fermentations: Mixed acid;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65908.peg.45 CDS gi|480983961|gb|AREP01000029.1| 9329 7854 -2 - 1476 Histidine permease YuiF - none -
fig|6666666.65908.peg.46 CDS gi|480983961|gb|AREP01000029.1| 10825 10118 -1 - 708 short chain dehydrogenase - none -
fig|6666666.65908.peg.47 CDS gi|480983961|gb|AREP01000029.1| 11328 10840 -3 - 489 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65908.peg.48 CDS gi|480983961|gb|AREP01000029.1| 12297 11395 -3 - 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65908.peg.49 CDS gi|480983961|gb|AREP01000029.1| 12999 12307 -3 - 693 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65908.peg.50 CDS gi|480983961|gb|AREP01000029.1| 14148 13051 -3 - 1098 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65908.peg.51 CDS gi|480983961|gb|AREP01000029.1| 14196 15008 3 + 813 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65908.peg.52 CDS gi|480983961|gb|AREP01000029.1| 15018 15803 3 + 786 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65908.peg.53 CDS gi|480983961|gb|AREP01000029.1| 17019 15820 -3 - 1200 No significant database matches - none -
fig|6666666.65908.peg.54 CDS gi|480983961|gb|AREP01000029.1| 17233 18174 1 + 942 hypothetical protein - none -
fig|6666666.65908.peg.55 CDS gi|480983961|gb|AREP01000029.1| 18137 19189 2 + 1053 VCBS precursor - none -
fig|6666666.65908.peg.56 CDS gi|480983964|gb|AREP01000028.1| 611 1285 2 + 675 TPR-repeat-containing protein - none -
fig|6666666.65908.peg.57 CDS gi|480983964|gb|AREP01000028.1| 1296 2279 3 + 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65908.peg.58 CDS gi|480983964|gb|AREP01000028.1| 2283 2450 3 + 168 hypothetical protein - none -
fig|6666666.65908.peg.59 CDS gi|480983964|gb|AREP01000028.1| 2473 3300 1 + 828 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.65908.peg.60 CDS gi|480983964|gb|AREP01000028.1| 3297 4220 3 + 924 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.65908.peg.61 CDS gi|480983964|gb|AREP01000028.1| 4232 5968 2 + 1737 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.65908.peg.62 CDS gi|480983964|gb|AREP01000028.1| 6036 7223 3 + 1188 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.65908.peg.63 CDS gi|480983964|gb|AREP01000028.1| 7270 8241 1 + 972 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.65908.peg.64 CDS gi|480983964|gb|AREP01000028.1| 8270 8920 2 + 651 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65908.peg.65 CDS gi|480983964|gb|AREP01000028.1| 8921 9826 2 + 906 Tyrosine recombinase XerD - none -
fig|6666666.65908.peg.66 CDS gi|480983964|gb|AREP01000028.1| 9966 10901 3 + 936 hypothetical protein - none -
fig|6666666.65908.peg.67 CDS gi|480983964|gb|AREP01000028.1| 10867 10986 1 + 120 hypothetical protein - none -
fig|6666666.65908.peg.68 CDS gi|480983964|gb|AREP01000028.1| 11057 11932 2 + 876 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65908.peg.69 CDS gi|480983964|gb|AREP01000028.1| 11932 12780 1 + 849 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65908.peg.70 CDS gi|480983964|gb|AREP01000028.1| 13340 12777 -2 - 564 FIG00546511: hypothetical protein - none -
fig|6666666.65908.peg.71 CDS gi|480983964|gb|AREP01000028.1| 13463 14002 2 + 540 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65908.peg.72 CDS gi|480983964|gb|AREP01000028.1| 14047 14946 1 + 900 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65908.peg.73 CDS gi|480983964|gb|AREP01000028.1| 14943 15638 3 + 696 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65908.peg.74 CDS gi|480983964|gb|AREP01000028.1| 15635 17194 2 + 1560 GTP-binding protein EngA - none -
fig|6666666.65908.peg.75 CDS gi|480983964|gb|AREP01000028.1| 17821 19005 1 + 1185 Esterase lipoprotein LpqC - none -
fig|6666666.65908.peg.76 CDS gi|480983964|gb|AREP01000028.1| 19804 19022 -1 - 783 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65908.peg.77 CDS gi|480983964|gb|AREP01000028.1| 19882 20856 1 + 975 putative ABC transporter permease protein - none -
fig|6666666.65908.peg.78 CDS gi|480983964|gb|AREP01000028.1| 21101 20853 -2 - 249 Mobile element protein - none -
fig|6666666.65908.peg.79 CDS gi|480983970|gb|AREP01000027.1| 907 260 -1 - 648 Mobile element protein - none -
fig|6666666.65908.peg.80 CDS gi|480983970|gb|AREP01000027.1| 1443 1006 -3 - 438 Mobile element protein - none -
fig|6666666.65908.peg.81 CDS gi|480983970|gb|AREP01000027.1| 4826 1845 -2 - 2982 hypothetical protein - none -
fig|6666666.65908.peg.82 CDS gi|480983970|gb|AREP01000027.1| 5009 6625 2 + 1617 Probable DNA methylase - none -
fig|6666666.65908.peg.83 CDS gi|480983970|gb|AREP01000027.1| 6813 6685 -3 - 129 hypothetical protein - none -
fig|6666666.65908.peg.84 CDS gi|480983970|gb|AREP01000027.1| 7554 8624 3 + 1071 hypothetical protein - none -
fig|6666666.65908.peg.85 CDS gi|480983970|gb|AREP01000027.1| 9140 9976 2 + 837 FIG00543872: hypothetical protein - none -
fig|6666666.65908.peg.86 CDS gi|480983970|gb|AREP01000027.1| 10014 10460 3 + 447 FIG00818182: hypothetical protein - none -
fig|6666666.65908.peg.87 CDS gi|480983970|gb|AREP01000027.1| 10457 11851 2 + 1395 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65908.peg.88 CDS gi|480983970|gb|AREP01000027.1| 11853 13238 3 + 1386 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65908.peg.89 CDS gi|480983970|gb|AREP01000027.1| 13235 14671 2 + 1437 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.90 CDS gi|480983970|gb|AREP01000027.1| 14671 16260 1 + 1590 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65908.peg.91 CDS gi|480983970|gb|AREP01000027.1| 16257 18260 3 + 2004 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65908.peg.92 CDS gi|480983970|gb|AREP01000027.1| 18323 18592 2 + 270 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65908.peg.93 CDS gi|480983970|gb|AREP01000027.1| 19865 19206 -2 - 660 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.65908.peg.94 CDS gi|480983970|gb|AREP01000027.1| 20452 19925 -1 - 528 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65908.peg.95 CDS gi|480983970|gb|AREP01000027.1| 22208 20565 -2 - 1644 hypothetical protein - none -
fig|6666666.65908.peg.96 CDS gi|480983973|gb|AREP01000026.1| 506 3166 2 + 2661 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65908.peg.97 CDS gi|480983973|gb|AREP01000026.1| 3163 3813 1 + 651 hypothetical protein - none -
fig|6666666.65908.peg.98 CDS gi|480983973|gb|AREP01000026.1| 5583 4057 -3 - 1527 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65908.peg.99 CDS gi|480983973|gb|AREP01000026.1| 5767 6861 1 + 1095 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65908.peg.100 CDS gi|480983973|gb|AREP01000026.1| 8885 7221 -2 - 1665 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.101 CDS gi|480983973|gb|AREP01000026.1| 9150 10010 3 + 861 Putative secreted hydrolase - none -
fig|6666666.65908.peg.102 CDS gi|480983973|gb|AREP01000026.1| 10057 12081 1 + 2025 beta-glucosidase-related glycosidase - none -
fig|6666666.65908.peg.103 CDS gi|480983973|gb|AREP01000026.1| 12139 13239 1 + 1101 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.65908.peg.104 CDS gi|480983973|gb|AREP01000026.1| 13239 13865 3 + 627 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.65908.peg.105 CDS gi|480983973|gb|AREP01000026.1| 13903 14823 1 + 921 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.65908.peg.106 CDS gi|480983973|gb|AREP01000026.1| 14886 16676 3 + 1791 hypothetical protein - none -
fig|6666666.65908.peg.107 CDS gi|480983973|gb|AREP01000026.1| 17826 16990 -3 - 837 Putative secreted protein - none -
fig|6666666.65908.peg.108 CDS gi|480983973|gb|AREP01000026.1| 18210 17869 -3 - 342 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65908.peg.109 CDS gi|480983973|gb|AREP01000026.1| 18906 18211 -3 - 696 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65908.peg.110 CDS gi|480983973|gb|AREP01000026.1| 19752 18916 -3 - 837 FIG00546606: hypothetical protein - none -
fig|6666666.65908.peg.111 CDS gi|480983973|gb|AREP01000026.1| 20625 19762 -3 - 864 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65908.peg.112 CDS gi|480983973|gb|AREP01000026.1| 21627 20689 -3 - 939 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65908.peg.113 CDS gi|480983973|gb|AREP01000026.1| 23083 21620 -1 - 1464 putative transport protein - none -
fig|6666666.65908.peg.114 CDS gi|480983973|gb|AREP01000026.1| 24044 23097 -2 - 948 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65908.peg.115 CDS gi|480983973|gb|AREP01000026.1| 25153 24128 -1 - 1026 Transcriptional regulator, LacI family - none -
fig|6666666.65908.peg.116 CDS gi|480983973|gb|AREP01000026.1| 25329 26000 3 + 672 Putative secreted protein - none -
fig|6666666.65908.peg.117 CDS gi|480983973|gb|AREP01000026.1| 26314 26925 1 + 612 hypothetical protein - none -
fig|6666666.65908.peg.118 CDS gi|480983976|gb|AREP01000025.1| 630 1148 3 + 519 DNA topology modulation protein - none -
fig|6666666.65908.peg.119 CDS gi|480983976|gb|AREP01000025.1| 1887 3104 3 + 1218 Putative membrane protein - none -
fig|6666666.65908.peg.120 CDS gi|480983976|gb|AREP01000025.1| 3134 4360 2 + 1227 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65908.peg.121 CDS gi|480983976|gb|AREP01000025.1| 4406 5419 2 + 1014 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65908.peg.122 CDS gi|480983976|gb|AREP01000025.1| 5416 8166 1 + 2751 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.123 CDS gi|480983976|gb|AREP01000025.1| 9008 8163 -2 - 846 putative secreted hydrolase - none -
fig|6666666.65908.peg.124 CDS gi|480983976|gb|AREP01000025.1| 10849 9014 -1 - 1836 xanthine/uracil permease - none -
fig|6666666.65908.peg.125 CDS gi|480983976|gb|AREP01000025.1| 11927 11034 -2 - 894 Transcriptional regulator, LysR family CBSS-349102.4.peg.3442
fig|6666666.65908.peg.126 CDS gi|480983976|gb|AREP01000025.1| 12052 12978 1 + 927 hypothetical protein - none -
fig|6666666.65908.peg.127 CDS gi|480983976|gb|AREP01000025.1| 13109 12975 -2 - 135 hypothetical protein - none -
fig|6666666.65908.peg.128 CDS gi|480983976|gb|AREP01000025.1| 14033 13368 -2 - 666 Transcriptional regulator, IclR family - none -
fig|6666666.65908.peg.129 CDS gi|480983976|gb|AREP01000025.1| 14130 15551 3 + 1422 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65908.peg.130 CDS gi|480983976|gb|AREP01000025.1| 15564 16154 3 + 591 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65908.peg.131 CDS gi|480983976|gb|AREP01000025.1| 17160 16159 -3 - 1002 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65908.peg.132 CDS gi|480983976|gb|AREP01000025.1| 17253 18251 3 + 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.133 CDS gi|480983976|gb|AREP01000025.1| 18284 19327 2 + 1044 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65908.peg.134 CDS gi|480983976|gb|AREP01000025.1| 20264 19335 -2 - 930 Putative exported protein - none -
fig|6666666.65908.peg.135 CDS gi|480983976|gb|AREP01000025.1| 20299 21261 1 + 963 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65908.peg.136 CDS gi|480983976|gb|AREP01000025.1| 21303 21914 3 + 612 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65908.peg.137 CDS gi|480983976|gb|AREP01000025.1| 21926 23446 2 + 1521 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.138 CDS gi|480983976|gb|AREP01000025.1| 23450 25543 2 + 2094 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65908.peg.139 CDS gi|480983976|gb|AREP01000025.1| 25561 26139 1 + 579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.65908.peg.140 CDS gi|480983976|gb|AREP01000025.1| 26140 26616 1 + 477 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.65908.peg.141 CDS gi|480983976|gb|AREP01000025.1| 26613 27359 3 + 747 FIG00543922: hypothetical protein - none -
fig|6666666.65908.peg.142 CDS gi|480983979|gb|AREP01000024.1| 7 246 1 + 240 Mobile element protein - none -
fig|6666666.65908.peg.143 CDS gi|480983979|gb|AREP01000024.1| 295 921 1 + 627 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65908.peg.144 CDS gi|480983979|gb|AREP01000024.1| 1123 1293 1 + 171 hypothetical protein - none -
fig|6666666.65908.peg.145 CDS gi|480983979|gb|AREP01000024.1| 1303 2229 1 + 927 ABC transporter, ATP-binding protein - none -
fig|6666666.65908.peg.146 CDS gi|480983979|gb|AREP01000024.1| 2229 2966 3 + 738 integral membrane protein - none -
fig|6666666.65908.peg.147 CDS gi|480983979|gb|AREP01000024.1| 3670 2963 -1 - 708 UbiE/COQ5 methyltransferase - none -
fig|6666666.65908.peg.148 CDS gi|480983979|gb|AREP01000024.1| 4459 3701 -1 - 759 ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65908.peg.149 CDS gi|480983979|gb|AREP01000024.1| 5503 4460 -1 - 1044 ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65908.peg.150 CDS gi|480983979|gb|AREP01000024.1| 6531 5557 -3 - 975 ABC transporter (iron.B12.siderophore.hemin) , permease component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65908.peg.151 CDS gi|480983979|gb|AREP01000024.1| 7074 6871 -3 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65908.peg.152 CDS gi|480983979|gb|AREP01000024.1| 7328 9685 2 + 2358 FIG00545284: hypothetical protein - none -
fig|6666666.65908.peg.153 CDS gi|480983979|gb|AREP01000024.1| 10065 9715 -3 - 351 hypothetical protein - none -
fig|6666666.65908.peg.154 CDS gi|480983979|gb|AREP01000024.1| 10370 10065 -2 - 306 Putative secreted protein - none -
fig|6666666.65908.peg.155 CDS gi|480983979|gb|AREP01000024.1| 10611 10381 -3 - 231 FIG043778: hypothetical protein CBSS-336982.3.peg.3874
fig|6666666.65908.peg.156 CDS gi|480983979|gb|AREP01000024.1| 10953 10642 -3 - 312 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.65908.peg.157 CDS gi|480983979|gb|AREP01000024.1| 11999 11229 -2 - 771 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.65908.peg.158 CDS gi|480983979|gb|AREP01000024.1| 13168 11996 -1 - 1173 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.65908.peg.159 CDS gi|480983979|gb|AREP01000024.1| 14202 13165 -3 - 1038 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.65908.peg.160 CDS gi|480983979|gb|AREP01000024.1| 14240 14365 2 + 126 hypothetical protein - none -
fig|6666666.65908.peg.161 CDS gi|480983979|gb|AREP01000024.1| 14682 15509 3 + 828 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65908.peg.162 CDS gi|480983979|gb|AREP01000024.1| 16196 15516 -2 - 681 hypothetical protein - none -
fig|6666666.65908.peg.163 CDS gi|480983979|gb|AREP01000024.1| 16326 16829 3 + 504 FIG00544230: hypothetical protein - none -
fig|6666666.65908.peg.164 CDS gi|480983979|gb|AREP01000024.1| 16932 17861 3 + 930 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.65908.peg.165 CDS gi|480983979|gb|AREP01000024.1| 19033 17840 -1 - 1194 putative serine protease - none -
fig|6666666.65908.peg.166 CDS gi|480983979|gb|AREP01000024.1| 19829 19119 -2 - 711 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65908.peg.167 CDS gi|480983979|gb|AREP01000024.1| 20444 19860 -2 - 585 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.65908.peg.168 CDS gi|480983979|gb|AREP01000024.1| 21259 20441 -1 - 819 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65908.peg.169 CDS gi|480983979|gb|AREP01000024.1| 21275 21403 2 + 129 hypothetical protein - none -
fig|6666666.65908.peg.170 CDS gi|480983979|gb|AREP01000024.1| 21656 22339 2 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65908.peg.171 CDS gi|480983979|gb|AREP01000024.1| 23067 22423 -3 - 645 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65908.peg.172 CDS gi|480983979|gb|AREP01000024.1| 23738 23277 -2 - 462 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65908.peg.173 CDS gi|480983979|gb|AREP01000024.1| 23906 23739 -2 - 168 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65908.peg.174 CDS gi|480983979|gb|AREP01000024.1| 24293 23925 -2 - 369 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65908.peg.175 CDS gi|480983979|gb|AREP01000024.1| 24514 26937 1 + 2424 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65908.peg.176 CDS gi|480983979|gb|AREP01000024.1| 27408 26956 -3 - 453 Transamidase GatB domain protein - none -
fig|6666666.65908.peg.177 CDS gi|480983979|gb|AREP01000024.1| 27453 28364 3 + 912 putative secreted protein - none -
fig|6666666.65908.peg.178 CDS gi|480983982|gb|AREP01000023.1| 990 802 -3 - 189 hypothetical protein - none -
fig|6666666.65908.peg.179 CDS gi|480983982|gb|AREP01000023.1| 2174 1017 -2 - 1158 Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase - none -
fig|6666666.65908.peg.180 CDS gi|480983982|gb|AREP01000023.1| 2836 2183 -1 - 654 FIG00546748: hypothetical protein - none -
fig|6666666.65908.peg.181 CDS gi|480983982|gb|AREP01000023.1| 4503 2848 -3 - 1656 DNA repair helicase - none -
fig|6666666.65908.peg.182 CDS gi|480983982|gb|AREP01000023.1| 5748 4579 -3 - 1170 FIG00547747: hypothetical protein - none -
fig|6666666.65908.peg.183 CDS gi|480983982|gb|AREP01000023.1| 6632 5745 -2 - 888 ABC transporter, ATP-binding protein - none -
fig|6666666.65908.peg.184 CDS gi|480983982|gb|AREP01000023.1| 7156 6632 -1 - 525 Putative membrane protein - none -
fig|6666666.65908.peg.185 CDS gi|480983982|gb|AREP01000023.1| 7425 7303 -3 - 123 hypothetical protein - none -
fig|6666666.65908.peg.186 CDS gi|480983982|gb|AREP01000023.1| 8064 7501 -3 - 564 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.187 CDS gi|480983982|gb|AREP01000023.1| 10384 8180 -1 - 2205 hypothetical protein - none -
fig|6666666.65908.peg.188 CDS gi|480983982|gb|AREP01000023.1| 10475 10669 2 + 195 FIG00543815: hypothetical protein - none -
fig|6666666.65908.peg.189 CDS gi|480983982|gb|AREP01000023.1| 11593 10922 -1 - 672 FIG00996461: hypothetical protein - none -
fig|6666666.65908.peg.190 CDS gi|480983982|gb|AREP01000023.1| 12160 12552 1 + 393 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65908.peg.191 CDS gi|480983982|gb|AREP01000023.1| 13111 12596 -1 - 516 FIG00545981: hypothetical protein - none -
fig|6666666.65908.peg.192 CDS gi|480983982|gb|AREP01000023.1| 13979 13122 -2 - 858 glutamine cyclotransferase - none -
fig|6666666.65908.peg.193 CDS gi|480983982|gb|AREP01000023.1| 14029 14757 1 + 729 FIG00546806: hypothetical protein - none -
fig|6666666.65908.peg.194 CDS gi|480983982|gb|AREP01000023.1| 15450 14761 -3 - 690 hypothetical protein - none -
fig|6666666.65908.peg.195 CDS gi|480983982|gb|AREP01000023.1| 15809 17161 2 + 1353 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65908.peg.196 CDS gi|480983982|gb|AREP01000023.1| 17168 18010 2 + 843 putative rRNA methylase - none -
fig|6666666.65908.peg.197 CDS gi|480983982|gb|AREP01000023.1| 18863 18018 -2 - 846 FIG00544583: hypothetical protein - none -
fig|6666666.65908.peg.198 CDS gi|480983982|gb|AREP01000023.1| 19838 18897 -2 - 942 FIG00545091: hypothetical protein - none -
fig|6666666.65908.peg.199 CDS gi|480983982|gb|AREP01000023.1| 21068 19938 -2 - 1131 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65908.peg.200 CDS gi|480983982|gb|AREP01000023.1| 21495 22790 3 + 1296 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65908.peg.201 CDS gi|480983982|gb|AREP01000023.1| 22947 23306 3 + 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65908.peg.202 CDS gi|480983982|gb|AREP01000023.1| 23396 24238 2 + 843 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65908.peg.203 CDS gi|480983982|gb|AREP01000023.1| 24564 24370 -3 - 195 hypothetical protein - none -
fig|6666666.65908.peg.204 CDS gi|480983982|gb|AREP01000023.1| 24541 24819 1 + 279 FIG00544151: hypothetical protein - none -
fig|6666666.65908.peg.205 CDS gi|480983982|gb|AREP01000023.1| 24823 26493 1 + 1671 putative transport protein - none -
fig|6666666.65908.peg.206 CDS gi|480983982|gb|AREP01000023.1| 27507 26578 -3 - 930 Putative secreted protein - none -
fig|6666666.65908.peg.207 CDS gi|480983982|gb|AREP01000023.1| 27640 29085 1 + 1446 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.65908.peg.208 CDS gi|480983982|gb|AREP01000023.1| 29305 29604 1 + 300 hypothetical protein - none -
fig|6666666.65908.peg.209 CDS gi|480983982|gb|AREP01000023.1| 29647 29901 1 + 255 hypothetical protein - none -
fig|6666666.65908.peg.210 CDS gi|480983982|gb|AREP01000023.1| 30837 29917 -3 - 921 Putative secreted protein - none -
fig|6666666.65908.peg.211 CDS gi|480983982|gb|AREP01000023.1| 31516 31304 -1 - 213 Mobile element protein - none -
fig|6666666.65908.peg.212 CDS gi|480983985|gb|AREP01000022.1| 22 234 1 + 213 Mobile element protein - none -
fig|6666666.65908.peg.213 CDS gi|480983985|gb|AREP01000022.1| 321 1952 3 + 1632 permease of the major facilitator superfamily - none -
fig|6666666.65908.peg.214 CDS gi|480983985|gb|AREP01000022.1| 2507 1953 -2 - 555 sortase or related acyltransferase - none -
fig|6666666.65908.peg.215 CDS gi|480983985|gb|AREP01000022.1| 3893 2550 -2 - 1344 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.65908.peg.216 CDS gi|480983985|gb|AREP01000022.1| 4643 4008 -2 - 636 hypothetical protein - none -
fig|6666666.65908.peg.217 CDS gi|480983985|gb|AREP01000022.1| 5334 4696 -3 - 639 putative LysR-family transcriptional regulator - none -
fig|6666666.65908.peg.218 CDS gi|480983985|gb|AREP01000022.1| 5359 5736 1 + 378 FIG00546727: hypothetical protein - none -
fig|6666666.65908.peg.219 CDS gi|480983985|gb|AREP01000022.1| 6971 5733 -2 - 1239 Neopullulanase (EC 3.2.1.135) Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.220 CDS gi|480983985|gb|AREP01000022.1| 8441 7152 -2 - 1290 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.65908.peg.221 CDS gi|480983985|gb|AREP01000022.1| 8580 9512 3 + 933 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65908.peg.222 CDS gi|480983985|gb|AREP01000022.1| 10022 9516 -2 - 507 FIG00544436: hypothetical protein - none -
fig|6666666.65908.peg.223 CDS gi|480983985|gb|AREP01000022.1| 10807 10043 -1 - 765 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65908.peg.224 CDS gi|480983985|gb|AREP01000022.1| 11843 10836 -2 - 1008 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65908.peg.225 CDS gi|480983985|gb|AREP01000022.1| 12435 12145 -3 - 291 FIG00543949: hypothetical protein - none -
fig|6666666.65908.peg.226 CDS gi|480983985|gb|AREP01000022.1| 13319 12435 -2 - 885 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65908.peg.227 CDS gi|480983985|gb|AREP01000022.1| 13539 13937 3 + 399 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.228 CDS gi|480983985|gb|AREP01000022.1| 14053 14574 1 + 522 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65908.peg.229 CDS gi|480983985|gb|AREP01000022.1| 14646 14921 3 + 276 hypothetical protein - none -
fig|6666666.65908.peg.230 CDS gi|480983985|gb|AREP01000022.1| 15903 15055 -3 - 849 FIG00543890: hypothetical protein - none -
fig|6666666.65908.peg.231 CDS gi|480983985|gb|AREP01000022.1| 16023 16988 3 + 966 hypothetical protein - none -
fig|6666666.65908.peg.232 CDS gi|480983985|gb|AREP01000022.1| 17573 19045 2 + 1473 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.65908.peg.233 CDS gi|480983985|gb|AREP01000022.1| 20280 19042 -3 - 1239 Dicarboxylate carrier protein - none -
fig|6666666.65908.peg.234 CDS gi|480983985|gb|AREP01000022.1| 23972 20334 -2 - 3639 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.65908.peg.235 CDS gi|480983985|gb|AREP01000022.1| 24513 23962 -3 - 552 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.236 CDS gi|480983985|gb|AREP01000022.1| 25025 26290 2 + 1266 Putative membrane protein - none -
fig|6666666.65908.peg.237 CDS gi|480983985|gb|AREP01000022.1| 26339 27796 2 + 1458 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65908.peg.238 CDS gi|480983985|gb|AREP01000022.1| 27844 28785 1 + 942 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.65908.peg.239 CDS gi|480983985|gb|AREP01000022.1| 29139 30590 3 + 1452 Melibiose carrier protein, Na+/melibiose symporter - none -
fig|6666666.65908.peg.240 CDS gi|480983985|gb|AREP01000022.1| 31512 30664 -3 - 849 hypothetical protein - none -
fig|6666666.65908.peg.241 CDS gi|480983985|gb|AREP01000022.1| 32675 31512 -2 - 1164 Gluconokinase (EC 2.7.1.12) / oxidoreductase domain D-gluconate and ketogluconates metabolism
fig|6666666.65908.peg.242 CDS gi|480983985|gb|AREP01000022.1| 33686 32679 -2 - 1008 putative lipopolysaccharide biosynthesis protein - none -
fig|6666666.65908.peg.243 CDS gi|480983985|gb|AREP01000022.1| 34541 33699 -2 - 843 FIG00547853: hypothetical protein - none -
fig|6666666.65908.peg.244 CDS gi|480983985|gb|AREP01000022.1| 35881 34760 -1 - 1122 L-Proline/Glycine betaine transporter ProP - none -
fig|6666666.65908.peg.245 CDS gi|480983988|gb|AREP01000021.1| 37 198 1 + 162 Mobile element protein - none -
fig|6666666.65908.peg.246 CDS gi|480983988|gb|AREP01000021.1| 263 946 2 + 684 DNA-binding response regulator mtrA - none -
fig|6666666.65908.peg.247 CDS gi|480983988|gb|AREP01000021.1| 1023 2531 3 + 1509 Putative two component system sensor kinase - none -
fig|6666666.65908.peg.248 CDS gi|480983988|gb|AREP01000021.1| 2528 4258 2 + 1731 LpqB - none -
fig|6666666.65908.peg.249 CDS gi|480983988|gb|AREP01000021.1| 4368 4868 3 + 501 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.65908.peg.250 CDS gi|480983988|gb|AREP01000021.1| 4958 5629 2 + 672 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65908.peg.251 CDS gi|480983988|gb|AREP01000021.1| 5788 8349 1 + 2562 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65908.peg.252 CDS gi|480983988|gb|AREP01000021.1| 8760 8356 -3 - 405 hypothetical protein - none -
fig|6666666.65908.peg.253 CDS gi|480983988|gb|AREP01000021.1| 8920 9315 1 + 396 FIG00996758: hypothetical protein - none -
fig|6666666.65908.peg.254 CDS gi|480983988|gb|AREP01000021.1| 9315 9809 3 + 495 FIG00544397: hypothetical protein - none -
fig|6666666.65908.peg.255 CDS gi|480983988|gb|AREP01000021.1| 10848 9826 -3 - 1023 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65908.peg.256 CDS gi|480983988|gb|AREP01000021.1| 12136 10841 -1 - 1296 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65908.peg.257 CDS gi|480983988|gb|AREP01000021.1| 12155 12832 2 + 678 FIG00543821: hypothetical protein - none -
fig|6666666.65908.peg.258 CDS gi|480983988|gb|AREP01000021.1| 12898 13491 1 + 594 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65908.peg.259 CDS gi|480983988|gb|AREP01000021.1| 13548 13769 3 + 222 hypothetical protein - none -
fig|6666666.65908.peg.260 CDS gi|480983988|gb|AREP01000021.1| 13915 14124 1 + 210 hypothetical protein - none -
fig|6666666.65908.peg.261 CDS gi|480983988|gb|AREP01000021.1| 14633 14373 -2 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65908.peg.262 CDS gi|480983988|gb|AREP01000021.1| 15182 15649 2 + 468 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.263 CDS gi|480983988|gb|AREP01000021.1| 16832 15630 -2 - 1203 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65908.peg.264 CDS gi|480983988|gb|AREP01000021.1| 18178 16829 -1 - 1350 putative ATP-dependent RNA helicase - none -
fig|6666666.65908.peg.265 CDS gi|480983988|gb|AREP01000021.1| 18290 18529 2 + 240 putative ATP-binding protein - none -
fig|6666666.65908.peg.266 CDS gi|480983988|gb|AREP01000021.1| 18551 19471 2 + 921 FIG00544386: hypothetical protein - none -
fig|6666666.65908.peg.267 CDS gi|480983988|gb|AREP01000021.1| 19502 20254 2 + 753 FIG00544868: hypothetical protein - none -
fig|6666666.65908.peg.268 CDS gi|480983988|gb|AREP01000021.1| 20366 23299 2 + 2934 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65908.peg.269 CDS gi|480983988|gb|AREP01000021.1| 23400 26609 3 + 3210 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65908.peg.270 CDS gi|480983988|gb|AREP01000021.1| 26702 27697 2 + 996 Potassium channel protein Potassium homeostasis
fig|6666666.65908.peg.271 CDS gi|480983988|gb|AREP01000021.1| 27697 28458 1 + 762 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65908.peg.272 CDS gi|480983988|gb|AREP01000021.1| 28455 30515 3 + 2061 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65908.peg.273 CDS gi|480983988|gb|AREP01000021.1| 31378 30512 -1 - 867 hypothetical protein - none -
fig|6666666.65908.peg.274 CDS gi|480983988|gb|AREP01000021.1| 31461 31934 3 + 474 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65908.peg.275 CDS gi|480983988|gb|AREP01000021.1| 33384 31951 -3 - 1434 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65908.peg.276 CDS gi|480983988|gb|AREP01000021.1| 33573 34583 3 + 1011 Lon-like protease with PDZ domain - none -
fig|6666666.65908.peg.277 CDS gi|480983988|gb|AREP01000021.1| 35302 34580 -1 - 723 FIG00544133: hypothetical protein - none -
fig|6666666.65908.peg.278 CDS gi|480983988|gb|AREP01000021.1| 35911 35345 -1 - 567 FIG129854: hypothetical protein - none -
fig|6666666.65908.peg.279 CDS gi|480983988|gb|AREP01000021.1| 36004 39003 1 + 3000 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65908.peg.280 CDS gi|480983988|gb|AREP01000021.1| 39599 39829 2 + 231 hypothetical protein - none -
fig|6666666.65908.peg.281 CDS gi|480983988|gb|AREP01000021.1| 39977 40609 2 + 633 FMN-dependent NADH-azoreductase - none -
fig|6666666.65908.peg.282 CDS gi|480983988|gb|AREP01000021.1| 42243 40606 -3 - 1638 Na(+)-linked D-alanine glycine permease - none -
fig|6666666.65908.peg.283 CDS gi|480983988|gb|AREP01000021.1| 42508 42347 -1 - 162 Mobile element protein - none -
fig|6666666.65908.peg.284 CDS gi|480983990|gb|AREP01000020.1| 1773 487 -3 - 1287 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65908.peg.285 CDS gi|480983990|gb|AREP01000020.1| 2028 1846 -3 - 183 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.65908.peg.286 CDS gi|480983990|gb|AREP01000020.1| 2291 2025 -2 - 267 hypothetical protein - none -
fig|6666666.65908.peg.287 CDS gi|480983990|gb|AREP01000020.1| 4251 2671 -3 - 1581 FIG00543839: hypothetical protein - none -
fig|6666666.65908.peg.288 CDS gi|480983990|gb|AREP01000020.1| 5408 4251 -2 - 1158 FIG00547275: hypothetical protein - none -
fig|6666666.65908.peg.289 CDS gi|480983990|gb|AREP01000020.1| 6891 5455 -3 - 1437 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65908.peg.290 CDS gi|480983990|gb|AREP01000020.1| 8096 6891 -2 - 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65908.peg.291 CDS gi|480983990|gb|AREP01000020.1| 8692 8195 -1 - 498 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65908.peg.292 CDS gi|480983990|gb|AREP01000020.1| 9631 8693 -1 - 939 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65908.peg.293 CDS gi|480983990|gb|AREP01000020.1| 10835 9633 -2 - 1203 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65908.peg.294 CDS gi|480983990|gb|AREP01000020.1| 11776 10838 -1 - 939 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65908.peg.295 CDS gi|480983990|gb|AREP01000020.1| 12978 11806 -3 - 1173 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.65908.peg.296 CDS gi|480983990|gb|AREP01000020.1| 14031 12988 -3 - 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65908.peg.297 CDS gi|480983990|gb|AREP01000020.1| 16613 14085 -2 - 2529 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65908.peg.298 CDS gi|480983990|gb|AREP01000020.1| 17684 16626 -2 - 1059 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65908.peg.299 CDS gi|480983990|gb|AREP01000020.1| 18601 17771 -1 - 831 FIG011178: rRNA methylase RNA methylation
fig|6666666.65908.peg.300 CDS gi|480983990|gb|AREP01000020.1| 19097 18714 -2 - 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65908.peg.301 CDS gi|480983990|gb|AREP01000020.1| 19349 19155 -2 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65908.peg.302 CDS gi|480983990|gb|AREP01000020.1| 19739 19380 -2 - 360 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65908.peg.303 CDS gi|480983990|gb|AREP01000020.1| 21070 20222 -1 - 849 hypothetical protein - none -
fig|6666666.65908.peg.304 CDS gi|480983990|gb|AREP01000020.1| 24018 21169 -3 - 2850 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65908.peg.305 CDS gi|480983990|gb|AREP01000020.1| 24174 24776 3 + 603 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65908.peg.306 CDS gi|480983990|gb|AREP01000020.1| 24867 25778 3 + 912 FIG00995839: hypothetical protein - none -
fig|6666666.65908.peg.307 CDS gi|480983990|gb|AREP01000020.1| 25905 28115 3 + 2211 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65908.peg.308 CDS gi|480983990|gb|AREP01000020.1| 28608 28165 -3 - 444 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65908.peg.309 CDS gi|480983990|gb|AREP01000020.1| 29159 28701 -2 - 459 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65908.peg.310 CDS gi|480983990|gb|AREP01000020.1| 31286 29181 -2 - 2106 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65908.peg.311 CDS gi|480983990|gb|AREP01000020.1| 31923 31324 -3 - 600 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65908.peg.312 CDS gi|480983990|gb|AREP01000020.1| 34103 32637 -2 - 1467 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.65908.peg.313 CDS gi|480983990|gb|AREP01000020.1| 34313 35059 2 + 747 SAM-dependent methyltransferases - none -
fig|6666666.65908.peg.314 CDS gi|480983990|gb|AREP01000020.1| 36078 35056 -3 - 1023 hypothetical protein - none -
fig|6666666.65908.peg.315 CDS gi|480983990|gb|AREP01000020.1| 38716 36062 -1 - 2655 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65908.peg.316 CDS gi|480983990|gb|AREP01000020.1| 39032 39919 2 + 888 FIG028593: membrane protein - none -
fig|6666666.65908.peg.317 CDS gi|480983990|gb|AREP01000020.1| 39930 40238 3 + 309 hypothetical protein - none -
fig|6666666.65908.peg.318 CDS gi|480983990|gb|AREP01000020.1| 40289 41182 2 + 894 ABC-type amino acid transport system, secreted component - none -
fig|6666666.65908.peg.319 CDS gi|480983990|gb|AREP01000020.1| 41186 42124 2 + 939 putative amino acid ABC transporter permease protein - none -
fig|6666666.65908.peg.320 CDS gi|480983990|gb|AREP01000020.1| 42124 42888 1 + 765 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.321 CDS gi|480983993|gb|AREP01000019.1| 905 258 -2 - 648 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.65908.peg.322 CDS gi|480983993|gb|AREP01000019.1| 2341 905 -1 - 1437 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.323 CDS gi|480983993|gb|AREP01000019.1| 2834 2481 -2 - 354 FIG00544092: hypothetical protein - none -
fig|6666666.65908.peg.324 CDS gi|480983993|gb|AREP01000019.1| 3104 3850 2 + 747 Fe-S oxidoreductase - none -
fig|6666666.65908.peg.325 CDS gi|480983993|gb|AREP01000019.1| 5055 3847 -3 - 1209 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65908.peg.326 CDS gi|480983993|gb|AREP01000019.1| 6055 5069 -1 - 987 FIG00545059: hypothetical protein - none -
fig|6666666.65908.peg.327 CDS gi|480983993|gb|AREP01000019.1| 7437 6067 -3 - 1371 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65908.peg.328 CDS gi|480983993|gb|AREP01000019.1| 7885 7496 -1 - 390 FIG00543823: hypothetical protein - none -
fig|6666666.65908.peg.329 CDS gi|480983993|gb|AREP01000019.1| 8066 8533 2 + 468 FIG00544777: hypothetical protein - none -
fig|6666666.65908.peg.330 CDS gi|480983993|gb|AREP01000019.1| 8829 8530 -3 - 300 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65908.peg.331 CDS gi|480983993|gb|AREP01000019.1| 10205 9126 -2 - 1080 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65908.peg.332 CDS gi|480983993|gb|AREP01000019.1| 11161 10253 -1 - 909 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65908.peg.333 CDS gi|480983993|gb|AREP01000019.1| 11291 12859 2 + 1569 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65908.peg.334 CDS gi|480983993|gb|AREP01000019.1| 13673 12861 -2 - 813 hypothetical protein - none -
fig|6666666.65908.peg.335 CDS gi|480983993|gb|AREP01000019.1| 13763 14428 2 + 666 FIG00545912: hypothetical protein - none -
fig|6666666.65908.peg.336 CDS gi|480983993|gb|AREP01000019.1| 14562 15635 3 + 1074 hypothetical protein - none -
fig|6666666.65908.peg.337 CDS gi|480983993|gb|AREP01000019.1| 16077 15625 -3 - 453 hypothetical protein - none -
fig|6666666.65908.peg.338 CDS gi|480983993|gb|AREP01000019.1| 16578 16078 -3 - 501 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65908.peg.339 CDS gi|480983993|gb|AREP01000019.1| 17739 16597 -3 - 1143 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65908.peg.340 CDS gi|480983993|gb|AREP01000019.1| 17779 18492 1 + 714 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.65908.peg.341 CDS gi|480983993|gb|AREP01000019.1| 18952 18497 -1 - 456 FIG00545249: hypothetical protein - none -
fig|6666666.65908.peg.342 CDS gi|480983993|gb|AREP01000019.1| 19675 18959 -1 - 717 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.65908.peg.343 CDS gi|480983993|gb|AREP01000019.1| 20731 19685 -1 - 1047 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65908.peg.344 CDS gi|480983993|gb|AREP01000019.1| 21342 20734 -3 - 609 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65908.peg.345 CDS gi|480983993|gb|AREP01000019.1| 21539 21345 -2 - 195 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.65908.peg.346 CDS gi|480983993|gb|AREP01000019.1| 22664 21549 -2 - 1116 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65908.peg.347 CDS gi|480983993|gb|AREP01000019.1| 23310 22657 -3 - 654 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65908.peg.348 CDS gi|480983993|gb|AREP01000019.1| 24001 23300 -1 - 702 Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
5-FCL-like protein;
Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.65908.peg.349 CDS gi|480983993|gb|AREP01000019.1| 24021 24932 3 + 912 hypothetical protein - none -
fig|6666666.65908.peg.350 CDS gi|480983993|gb|AREP01000019.1| 25077 26708 3 + 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.65908.peg.351 CDS gi|480983993|gb|AREP01000019.1| 26748 27950 3 + 1203 hypothetical protein - none -
fig|6666666.65908.peg.352 CDS gi|480983993|gb|AREP01000019.1| 29483 27957 -2 - 1527 hypothetical protein - none -
fig|6666666.65908.peg.353 CDS gi|480983993|gb|AREP01000019.1| 29810 29538 -2 - 273 hypothetical protein - none -
fig|6666666.65908.peg.354 CDS gi|480983993|gb|AREP01000019.1| 31326 29848 -3 - 1479 D-beta-hydroxybutyrate permease - none -
fig|6666666.65908.peg.355 CDS gi|480983993|gb|AREP01000019.1| 31436 32017 2 + 582 probable transcriptional regulator - none -
fig|6666666.65908.peg.356 CDS gi|480983993|gb|AREP01000019.1| 32892 32014 -3 - 879 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) - none -
fig|6666666.65908.peg.357 CDS gi|480983993|gb|AREP01000019.1| 34470 32953 -3 - 1518 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) - none -
fig|6666666.65908.peg.358 CDS gi|480983993|gb|AREP01000019.1| 34745 37381 2 + 2637 Protein acetyltransferase Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.359 CDS gi|480983993|gb|AREP01000019.1| 37393 38535 1 + 1143 NAD-independent protein deacetylase AcuC Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.360 CDS gi|480983993|gb|AREP01000019.1| 39312 38539 -3 - 774 3-hydroxyacyl-CoA dehydrogenase - none -
fig|6666666.65908.peg.361 CDS gi|480983993|gb|AREP01000019.1| 40573 39374 -1 - 1200 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.65908.peg.362 CDS gi|480983993|gb|AREP01000019.1| 40737 41306 3 + 570 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.363 CDS gi|480983993|gb|AREP01000019.1| 41471 43240 2 + 1770 Acetyl-coenzyme A synthetase (EC 6.2.1.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.364 CDS gi|480983993|gb|AREP01000019.1| 45014 44244 -2 - 771 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.365 CDS gi|480983993|gb|AREP01000019.1| 45341 45102 -2 - 240 Mobile element protein - none -
fig|6666666.65908.peg.366 CDS gi|480983996|gb|AREP01000018.1| 33 194 3 + 162 Mobile element protein - none -
fig|6666666.65908.peg.367 CDS gi|480983996|gb|AREP01000018.1| 1002 157 -3 - 846 Glycosyltransferase - none -
fig|6666666.65908.peg.368 CDS gi|480983996|gb|AREP01000018.1| 2249 999 -2 - 1251 Sulfolipid (UDP-sulfoquinovose) biosynthesis protein - none -
fig|6666666.65908.peg.369 CDS gi|480983996|gb|AREP01000018.1| 2771 2361 -2 - 411 hypothetical protein - none -
fig|6666666.65908.peg.370 CDS gi|480983996|gb|AREP01000018.1| 2812 3975 1 + 1164 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.65908.peg.371 CDS gi|480983996|gb|AREP01000018.1| 4539 3982 -3 - 558 putative secreted protein - none -
fig|6666666.65908.peg.372 CDS gi|480983996|gb|AREP01000018.1| 4538 4735 2 + 198 hypothetical protein - none -
fig|6666666.65908.peg.373 CDS gi|480983996|gb|AREP01000018.1| 6418 4700 -1 - 1719 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65908.peg.374 CDS gi|480983996|gb|AREP01000018.1| 7940 6429 -2 - 1512 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65908.peg.375 CDS gi|480983996|gb|AREP01000018.1| 8455 7958 -1 - 498 Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65908.peg.376 CDS gi|480983996|gb|AREP01000018.1| 9408 8698 -3 - 711 hypothetical protein - none -
fig|6666666.65908.peg.377 CDS gi|480983996|gb|AREP01000018.1| 9637 10452 1 + 816 hypothetical protein - none -
fig|6666666.65908.peg.378 CDS gi|480983996|gb|AREP01000018.1| 12080 10449 -2 - 1632 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65908.peg.379 CDS gi|480983996|gb|AREP01000018.1| 12189 12743 3 + 555 putative reductase - none -
fig|6666666.65908.peg.380 CDS gi|480983996|gb|AREP01000018.1| 12986 12822 -2 - 165 hypothetical protein - none -
fig|6666666.65908.peg.381 CDS gi|480983996|gb|AREP01000018.1| 13806 13171 -3 - 636 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65908.peg.382 CDS gi|480983996|gb|AREP01000018.1| 13818 14771 3 + 954 oxidoreductase - none -
fig|6666666.65908.peg.383 CDS gi|480983996|gb|AREP01000018.1| 14768 16150 2 + 1383 hypothetical protein - none -
fig|6666666.65908.peg.384 CDS gi|480983996|gb|AREP01000018.1| 16170 17222 3 + 1053 hypothetical protein - none -
fig|6666666.65908.peg.385 CDS gi|480983996|gb|AREP01000018.1| 18341 17241 -2 - 1101 hypothetical protein; putative His-Me finger endonuclease domain - none -
fig|6666666.65908.peg.386 CDS gi|480983996|gb|AREP01000018.1| 19622 18906 -2 - 717 Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4) Glutathione analogs: mycothiol
fig|6666666.65908.peg.387 CDS gi|480983996|gb|AREP01000018.1| 20449 19622 -1 - 828 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65908.peg.388 CDS gi|480983996|gb|AREP01000018.1| 21571 20453 -1 - 1119 Gentisate 1,2-dioxygenase (EC 1.13.11.4) Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65908.peg.389 CDS gi|480983996|gb|AREP01000018.1| 22319 21705 -2 - 615 Transcriptional regulator, IclR family - none -
fig|6666666.65908.peg.390 CDS gi|480983996|gb|AREP01000018.1| 22546 23907 1 + 1362 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65908.peg.391 CDS gi|480983996|gb|AREP01000018.1| 23972 25348 2 + 1377 Putative n-hydroxybenzoate hydroxylase Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65908.peg.392 CDS gi|480983996|gb|AREP01000018.1| 25954 25409 -1 - 546 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65908.peg.393 CDS gi|480983996|gb|AREP01000018.1| 26666 26013 -2 - 654 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65908.peg.394 CDS gi|480983996|gb|AREP01000018.1| 28173 26836 -3 - 1338 L-Proline/Glycine betaine transporter ProP - none -
fig|6666666.65908.peg.395 CDS gi|480983996|gb|AREP01000018.1| 28270 29385 1 + 1116 putative multidrug resistance protein - none -
fig|6666666.65908.peg.396 CDS gi|480983996|gb|AREP01000018.1| 30955 29417 -1 - 1539 hypothetical protein - none -
fig|6666666.65908.peg.397 CDS gi|480983996|gb|AREP01000018.1| 31096 32712 1 + 1617 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65908.peg.398 CDS gi|480983996|gb|AREP01000018.1| 34767 32713 -3 - 2055 Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Aromatic Amin Catabolism
fig|6666666.65908.peg.399 CDS gi|480983996|gb|AREP01000018.1| 34892 35299 2 + 408 FIG00548554: hypothetical protein - none -
fig|6666666.65908.peg.400 CDS gi|480983996|gb|AREP01000018.1| 36147 35296 -3 - 852 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis
fig|6666666.65908.peg.401 CDS gi|480983996|gb|AREP01000018.1| 36914 36159 -2 - 756 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.402 CDS gi|480983996|gb|AREP01000018.1| 38054 36915 -2 - 1140 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65908.peg.403 CDS gi|480983996|gb|AREP01000018.1| 38914 38129 -1 - 786 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.404 CDS gi|480983996|gb|AREP01000018.1| 40079 38925 -2 - 1155 Phenylacetate-CoA oxygenase/reductase, PaaK subunit - none -
fig|6666666.65908.peg.405 CDS gi|480983996|gb|AREP01000018.1| 40615 40079 -1 - 537 Phenylacetate-CoA oxygenase, PaaJ subunit - none -
fig|6666666.65908.peg.406 CDS gi|480983996|gb|AREP01000018.1| 41471 40638 -2 - 834 Phenylacetate-CoA oxygenase, PaaI subunit - none -
fig|6666666.65908.peg.407 CDS gi|480983996|gb|AREP01000018.1| 41758 41468 -1 - 291 Phenylacetate-CoA oxygenase, PaaH subunit - none -
fig|6666666.65908.peg.408 CDS gi|480983996|gb|AREP01000018.1| 42762 41785 -3 - 978 Phenylacetate-CoA oxygenase, PaaG subunit - none -
fig|6666666.65908.peg.409 CDS gi|480983996|gb|AREP01000018.1| 43368 42916 -3 - 453 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.65908.peg.410 CDS gi|480983996|gb|AREP01000018.1| 43617 44111 3 + 495 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.411 CDS gi|480983996|gb|AREP01000018.1| 44304 45620 3 + 1317 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) - none -
fig|6666666.65908.peg.412 CDS gi|480983996|gb|AREP01000018.1| 45754 46089 1 + 336 putative major facilitator superfamily (MFS) transporter - none -
fig|6666666.65908.peg.413 CDS gi|480983996|gb|AREP01000018.1| 46203 46051 -3 - 153 Mobile element protein - none -
fig|6666666.65908.peg.414 CDS gi|480983999|gb|AREP01000017.1| 1801 1034 -1 - 768 hypothetical protein - none -
fig|6666666.65908.peg.415 CDS gi|480983999|gb|AREP01000017.1| 2747 1815 -2 - 933 hypothetical protein - none -
fig|6666666.65908.peg.416 CDS gi|480983999|gb|AREP01000017.1| 3546 2794 -3 - 753 FIG000859: hypothetical protein - none -
fig|6666666.65908.peg.417 CDS gi|480983999|gb|AREP01000017.1| 4552 3674 -1 - 879 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.65908.peg.418 CDS gi|480983999|gb|AREP01000017.1| 4628 5092 2 + 465 hypothetical membrane protein - none -
fig|6666666.65908.peg.419 CDS gi|480983999|gb|AREP01000017.1| 5544 5089 -3 - 456 FIG053954: Probable conserved membrane protein - none -
fig|6666666.65908.peg.420 CDS gi|480983999|gb|AREP01000017.1| 6637 5549 -1 - 1089 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.65908.peg.421 CDS gi|480983999|gb|AREP01000017.1| 7416 6640 -3 - 777 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.65908.peg.422 CDS gi|480983999|gb|AREP01000017.1| 8183 7566 -2 - 618 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.423 CDS gi|480983999|gb|AREP01000017.1| 8826 8209 -3 - 618 FIG049476: HIT family protein - none -
fig|6666666.65908.peg.424 CDS gi|480983999|gb|AREP01000017.1| 10849 8783 -1 - 2067 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.65908.peg.425 CDS gi|480983999|gb|AREP01000017.1| 12249 11002 -3 - 1248 Dyp-type peroxidase family protein - none -
fig|6666666.65908.peg.426 CDS gi|480983999|gb|AREP01000017.1| 12942 12286 -3 - 657 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65908.peg.427 CDS gi|480983999|gb|AREP01000017.1| 13527 12988 -3 - 540 FIG00543909: hypothetical protein - none -
fig|6666666.65908.peg.428 CDS gi|480983999|gb|AREP01000017.1| 14846 15535 2 + 690 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.65908.peg.429 CDS gi|480983999|gb|AREP01000017.1| 15541 16773 1 + 1233 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65908.peg.430 CDS gi|480983999|gb|AREP01000017.1| 16766 17167 2 + 402 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65908.peg.431 CDS gi|480983999|gb|AREP01000017.1| 17970 17269 -3 - 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.432 CDS gi|480983999|gb|AREP01000017.1| 18217 18744 1 + 528 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65908.peg.433 CDS gi|480983999|gb|AREP01000017.1| 18746 19957 2 + 1212 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.65908.peg.434 CDS gi|480983999|gb|AREP01000017.1| 21870 19954 -3 - 1917 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65908.peg.435 CDS gi|480983999|gb|AREP01000017.1| 23253 21973 -3 - 1281 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.65908.peg.436 CDS gi|480983999|gb|AREP01000017.1| 24179 23253 -2 - 927 FIG00545882: hypothetical protein - none -
fig|6666666.65908.peg.437 CDS gi|480983999|gb|AREP01000017.1| 24616 24221 -1 - 396 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65908.peg.438 CDS gi|480983999|gb|AREP01000017.1| 24756 25265 3 + 510 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65908.peg.439 CDS gi|480983999|gb|AREP01000017.1| 25634 25341 -2 - 294 FIG00545109: hypothetical protein - none -
fig|6666666.65908.peg.440 CDS gi|480983999|gb|AREP01000017.1| 26643 25750 -3 - 894 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.65908.peg.441 CDS gi|480983999|gb|AREP01000017.1| 26652 27452 3 + 801 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65908.peg.442 CDS gi|480983999|gb|AREP01000017.1| 27683 29137 2 + 1455 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65908.peg.443 CDS gi|480983999|gb|AREP01000017.1| 30356 29214 -2 - 1143 hypothetical protein - none -
fig|6666666.65908.peg.444 CDS gi|480983999|gb|AREP01000017.1| 31092 30484 -3 - 609 hypothetical protein - none -
fig|6666666.65908.peg.445 CDS gi|480983999|gb|AREP01000017.1| 32981 31227 -2 - 1755 DNA or RNA helicases of superfamily II - none -
fig|6666666.65908.peg.446 CDS gi|480983999|gb|AREP01000017.1| 33234 32986 -3 - 249 FIG00544358: hypothetical protein - none -
fig|6666666.65908.peg.447 CDS gi|480983999|gb|AREP01000017.1| 33457 33762 1 + 306 FIG00545207: hypothetical protein - none -
fig|6666666.65908.peg.448 CDS gi|480983999|gb|AREP01000017.1| 33788 35311 2 + 1524 Putative transferase - none -
fig|6666666.65908.peg.449 CDS gi|480983999|gb|AREP01000017.1| 35329 35742 1 + 414 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65908.peg.450 CDS gi|480983999|gb|AREP01000017.1| 35834 36823 2 + 990 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65908.peg.451 CDS gi|480983999|gb|AREP01000017.1| 37011 37697 3 + 687 Iron-dependent repressor IdeR/DtxR - none -
fig|6666666.65908.peg.452 CDS gi|480983999|gb|AREP01000017.1| 37757 38752 2 + 996 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.65908.peg.453 CDS gi|480983999|gb|AREP01000017.1| 39895 38771 -1 - 1125 FIG00544535: hypothetical protein - none -
fig|6666666.65908.peg.454 CDS gi|480983999|gb|AREP01000017.1| 40142 41215 2 + 1074 FIG00544614: hypothetical protein - none -
fig|6666666.65908.peg.455 CDS gi|480983999|gb|AREP01000017.1| 41251 43797 1 + 2547 putative helicase - none -
fig|6666666.65908.peg.456 CDS gi|480983999|gb|AREP01000017.1| 45226 43811 -1 - 1416 hypothetical protein - none -
fig|6666666.65908.peg.457 CDS gi|480983999|gb|AREP01000017.1| 45808 45329 -1 - 480 hypothetical protein - none -
fig|6666666.65908.peg.458 CDS gi|480983999|gb|AREP01000017.1| 46213 45956 -1 - 258 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65908.peg.459 CDS gi|480984002|gb|AREP01000016.1| 7 255 1 + 249 Mobile element protein - none -
fig|6666666.65908.peg.460 CDS gi|480984002|gb|AREP01000016.1| 331 1287 1 + 957 hypothetical protein - none -
fig|6666666.65908.peg.461 CDS gi|480984002|gb|AREP01000016.1| 2991 1573 -3 - 1419 FIG00544507: hypothetical protein - none -
fig|6666666.65908.peg.462 CDS gi|480984002|gb|AREP01000016.1| 3114 6074 3 + 2961 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65908.peg.463 CDS gi|480984002|gb|AREP01000016.1| 6071 6526 2 + 456 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65908.peg.464 CDS gi|480984002|gb|AREP01000016.1| 6530 8068 2 + 1539 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65908.peg.465 CDS gi|480984002|gb|AREP01000016.1| 8068 8469 1 + 402 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65908.peg.466 CDS gi|480984002|gb|AREP01000016.1| 8471 8737 2 + 267 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65908.peg.467 CDS gi|480984002|gb|AREP01000016.1| 8737 9063 1 + 327 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65908.peg.468 CDS gi|480984002|gb|AREP01000016.1| 10838 9279 -2 - 1560 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65908.peg.469 CDS gi|480984002|gb|AREP01000016.1| 10895 11533 2 + 639 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65908.peg.470 CDS gi|480984002|gb|AREP01000016.1| 11734 13185 1 + 1452 FIG00544530: hypothetical protein - none -
fig|6666666.65908.peg.471 CDS gi|480984002|gb|AREP01000016.1| 13835 13395 -2 - 441 hypothetical protein - none -
fig|6666666.65908.peg.472 CDS gi|480984002|gb|AREP01000016.1| 15044 14013 -2 - 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65908.peg.473 CDS gi|480984002|gb|AREP01000016.1| 16398 15133 -3 - 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65908.peg.474 CDS gi|480984002|gb|AREP01000016.1| 16534 17388 1 + 855 hypothetical protein - none -
fig|6666666.65908.peg.475 CDS gi|480984002|gb|AREP01000016.1| 17672 19510 2 + 1839 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65908.peg.476 CDS gi|480984002|gb|AREP01000016.1| 19775 19548 -2 - 228 hypothetical protein - none -
fig|6666666.65908.peg.477 CDS gi|480984002|gb|AREP01000016.1| 20396 21940 2 + 1545 hypothetical protein - none -
fig|6666666.65908.peg.478 CDS gi|480984002|gb|AREP01000016.1| 22008 23006 3 + 999 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.65908.peg.479 CDS gi|480984002|gb|AREP01000016.1| 23025 24308 3 + 1284 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65908.peg.480 CDS gi|480984002|gb|AREP01000016.1| 24301 25059 1 + 759 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65908.peg.481 CDS gi|480984002|gb|AREP01000016.1| 25705 25079 -1 - 627 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65908.peg.482 CDS gi|480984002|gb|AREP01000016.1| 26171 25827 -2 - 345 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65908.peg.483 CDS gi|480984002|gb|AREP01000016.1| 28617 26410 -3 - 2208 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65908.peg.484 CDS gi|480984002|gb|AREP01000016.1| 29465 28899 -2 - 567 No significant database matches - none -
fig|6666666.65908.peg.485 CDS gi|480984002|gb|AREP01000016.1| 30740 29466 -2 - 1275 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65908.peg.486 CDS gi|480984002|gb|AREP01000016.1| 31240 33645 1 + 2406 hypothetical protein - none -
fig|6666666.65908.peg.487 CDS gi|480984002|gb|AREP01000016.1| 33690 33917 3 + 228 hypothetical protein - none -
fig|6666666.65908.peg.488 CDS gi|480984002|gb|AREP01000016.1| 34310 34173 -2 - 138 hypothetical protein - none -
fig|6666666.65908.peg.489 CDS gi|480984002|gb|AREP01000016.1| 34725 35153 3 + 429 hypothetical protein - none -
fig|6666666.65908.peg.490 CDS gi|480984002|gb|AREP01000016.1| 36360 35818 -3 - 543 Mobile element protein - none -
fig|6666666.65908.peg.491 CDS gi|480984002|gb|AREP01000016.1| 38194 36641 -1 - 1554 hypothetical protein - none -
fig|6666666.65908.peg.492 CDS gi|480984002|gb|AREP01000016.1| 39233 38415 -2 - 819 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65908.peg.493 CDS gi|480984002|gb|AREP01000016.1| 39389 40063 2 + 675 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.65908.peg.494 CDS gi|480984002|gb|AREP01000016.1| 41365 40067 -1 - 1299 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65908.peg.495 CDS gi|480984002|gb|AREP01000016.1| 43811 41358 -2 - 2454 putative membrane protein - none -
fig|6666666.65908.peg.496 CDS gi|480984002|gb|AREP01000016.1| 44255 44043 -2 - 213 FIG00546156: hypothetical protein - none -
fig|6666666.65908.peg.497 CDS gi|480984002|gb|AREP01000016.1| 44765 44337 -2 - 429 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.65908.peg.498 CDS gi|480984002|gb|AREP01000016.1| 45288 44800 -3 - 489 FIG00544249: hypothetical protein - none -
fig|6666666.65908.peg.499 CDS gi|480984002|gb|AREP01000016.1| 45364 46356 1 + 993 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65908.peg.500 CDS gi|480984002|gb|AREP01000016.1| 48153 46780 -3 - 1374 di- and tricarboxylate transporter - none -
fig|6666666.65908.peg.501 CDS gi|480984005|gb|AREP01000015.1| 927 475 -3 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65908.peg.502 CDS gi|480984005|gb|AREP01000015.1| 1609 965 -1 - 645 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65908.peg.503 CDS gi|480984005|gb|AREP01000015.1| 1987 1691 -1 - 297 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.65908.peg.504 CDS gi|480984005|gb|AREP01000015.1| 2242 2120 -1 - 123 hypothetical protein - none -
fig|6666666.65908.peg.505 CDS gi|480984005|gb|AREP01000015.1| 3708 2239 -3 - 1470 putative membrane protein - none -
fig|6666666.65908.peg.506 CDS gi|480984005|gb|AREP01000015.1| 6113 3795 -2 - 2319 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65908.peg.507 CDS gi|480984005|gb|AREP01000015.1| 6562 6200 -1 - 363 FIG00544267: hypothetical protein - none -
fig|6666666.65908.peg.508 CDS gi|480984005|gb|AREP01000015.1| 6708 7799 3 + 1092 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.65908.peg.509 CDS gi|480984005|gb|AREP01000015.1| 7855 8325 1 + 471 Transcriptional regulator, MarR family - none -
fig|6666666.65908.peg.510 CDS gi|480984005|gb|AREP01000015.1| 8384 9361 2 + 978 Universal stress protein family - none -
fig|6666666.65908.peg.511 CDS gi|480984005|gb|AREP01000015.1| 9372 9839 3 + 468 hypothetical membrane protein - none -
fig|6666666.65908.peg.512 CDS gi|480984005|gb|AREP01000015.1| 9955 11598 1 + 1644 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65908.peg.513 CDS gi|480984005|gb|AREP01000015.1| 12494 11595 -2 - 900 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65908.peg.514 CDS gi|480984005|gb|AREP01000015.1| 12878 12537 -2 - 342 hypothetical protein - none -
fig|6666666.65908.peg.515 CDS gi|480984005|gb|AREP01000015.1| 14373 12880 -3 - 1494 ATP-dependent Zn protease - none -
fig|6666666.65908.peg.516 CDS gi|480984005|gb|AREP01000015.1| 14444 15256 2 + 813 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65908.peg.517 CDS gi|480984005|gb|AREP01000015.1| 15281 16792 2 + 1512 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65908.peg.518 CDS gi|480984005|gb|AREP01000015.1| 17427 16789 -3 - 639 hypothetical protein - none -
fig|6666666.65908.peg.519 CDS gi|480984005|gb|AREP01000015.1| 18372 17692 -3 - 681 ABC transport system ATP-binding protein - none -
fig|6666666.65908.peg.520 CDS gi|480984005|gb|AREP01000015.1| 19355 18369 -2 - 987 FIG00545752: hypothetical protein - none -
fig|6666666.65908.peg.521 CDS gi|480984005|gb|AREP01000015.1| 19457 20590 2 + 1134 two component system histidine kinase - none -
fig|6666666.65908.peg.522 CDS gi|480984005|gb|AREP01000015.1| 20587 21192 1 + 606 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65908.peg.523 CDS gi|480984005|gb|AREP01000015.1| 21203 22204 2 + 1002 monooxygenase, putative - none -
fig|6666666.65908.peg.524 CDS gi|480984005|gb|AREP01000015.1| 22252 23418 1 + 1167 FIG00543893: hypothetical protein - none -
fig|6666666.65908.peg.525 CDS gi|480984005|gb|AREP01000015.1| 23487 24146 3 + 660 Predicted dinucleotide-binding enzymes - none -
fig|6666666.65908.peg.526 CDS gi|480984005|gb|AREP01000015.1| 24148 25206 1 + 1059 putative oxidoreductase - none -
fig|6666666.65908.peg.527 CDS gi|480984005|gb|AREP01000015.1| 26058 25891 -3 - 168 Mobile element protein - none -
fig|6666666.65908.peg.528 CDS gi|480984005|gb|AREP01000015.1| 27066 26179 -3 - 888 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65908.peg.529 CDS gi|480984005|gb|AREP01000015.1| 27884 27069 -2 - 816 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.65908.peg.530 CDS gi|480984005|gb|AREP01000015.1| 29708 27957 -2 - 1752 hypothetical protein - none -
fig|6666666.65908.peg.531 CDS gi|480984005|gb|AREP01000015.1| 31501 29993 -1 - 1509 sugar kinase - none -
fig|6666666.65908.peg.532 CDS gi|480984005|gb|AREP01000015.1| 31622 32899 2 + 1278 hypothetical protein - none -
fig|6666666.65908.peg.533 CDS gi|480984005|gb|AREP01000015.1| 33205 32873 -1 - 333 hypothetical membrane protein - none -
fig|6666666.65908.peg.534 CDS gi|480984005|gb|AREP01000015.1| 33618 33232 -3 - 387 FIG00544824: hypothetical protein - none -
fig|6666666.65908.peg.535 CDS gi|480984005|gb|AREP01000015.1| 34100 33624 -2 - 477 Conserved integral membrane protein - none -
fig|6666666.65908.peg.536 CDS gi|480984005|gb|AREP01000015.1| 34222 35169 1 + 948 hypothetical protein - none -
fig|6666666.65908.peg.537 CDS gi|480984005|gb|AREP01000015.1| 35188 36153 1 + 966 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.538 CDS gi|480984005|gb|AREP01000015.1| 36456 37631 3 + 1176 UPF0324 membrane protein DVU_2133 - none -
fig|6666666.65908.peg.539 CDS gi|480984005|gb|AREP01000015.1| 40489 37646 -1 - 2844 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65908.peg.540 CDS gi|480984005|gb|AREP01000015.1| 41688 40561 -3 - 1128 hypothetical protein - none -
fig|6666666.65908.peg.541 CDS gi|480984005|gb|AREP01000015.1| 42018 42221 3 + 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65908.peg.542 CDS gi|480984005|gb|AREP01000015.1| 42347 43096 2 + 750 short chain dehydrogenase - none -
fig|6666666.65908.peg.543 CDS gi|480984005|gb|AREP01000015.1| 45106 43490 -1 - 1617 hypothetical protein - none -
fig|6666666.65908.peg.544 CDS gi|480984005|gb|AREP01000015.1| 46571 46137 -2 - 435 hypothetical protein - none -
fig|6666666.65908.peg.545 CDS gi|480984005|gb|AREP01000015.1| 47258 47980 2 + 723 transcriptional regulator, GntR family - none -
fig|6666666.65908.peg.546 CDS gi|480984005|gb|AREP01000015.1| 48135 49538 3 + 1404 FIG00549167: hypothetical protein - none -
fig|6666666.65908.peg.547 CDS gi|480984005|gb|AREP01000015.1| 49559 50458 2 + 900 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) - none -
fig|6666666.65908.peg.548 CDS gi|480984005|gb|AREP01000015.1| 50465 51802 2 + 1338 Gluconate permease D-gluconate and ketogluconates metabolism
fig|6666666.65908.peg.549 CDS gi|480984005|gb|AREP01000015.1| 52072 51911 -1 - 162 hypothetical protein - none -
fig|6666666.65908.peg.550 CDS gi|480984008|gb|AREP01000014.1| 483 76 -3 - 408 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65908.peg.551 CDS gi|480984008|gb|AREP01000014.1| 1992 508 -3 - 1485 integral membrane transporter - none -
fig|6666666.65908.peg.552 CDS gi|480984008|gb|AREP01000014.1| 3335 1992 -2 - 1344 hypothetical protein - none -
fig|6666666.65908.peg.553 CDS gi|480984008|gb|AREP01000014.1| 4354 3488 -1 - 867 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65908.peg.554 CDS gi|480984008|gb|AREP01000014.1| 4430 5401 2 + 972 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65908.peg.555 CDS gi|480984008|gb|AREP01000014.1| 5442 6404 3 + 963 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65908.peg.556 CDS gi|480984008|gb|AREP01000014.1| 6551 6820 2 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.65908.peg.557 CDS gi|480984008|gb|AREP01000014.1| 7146 9419 3 + 2274 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65908.peg.558 CDS gi|480984008|gb|AREP01000014.1| 10169 9495 -2 - 675 No significant database matches - none -
fig|6666666.65908.peg.559 CDS gi|480984008|gb|AREP01000014.1| 10363 11109 1 + 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65908.peg.560 CDS gi|480984008|gb|AREP01000014.1| 11123 11875 2 + 753 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65908.peg.561 CDS gi|480984008|gb|AREP01000014.1| 11955 12863 3 + 909 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65908.peg.562 CDS gi|480984008|gb|AREP01000014.1| 12866 14854 2 + 1989 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.65908.peg.563 CDS gi|480984008|gb|AREP01000014.1| 14899 15510 1 + 612 hypothetical protein - none -
fig|6666666.65908.peg.564 CDS gi|480984008|gb|AREP01000014.1| 15772 18726 1 + 2955 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65908.peg.565 CDS gi|480984008|gb|AREP01000014.1| 18756 19262 3 + 507 hypothetical protein - none -
fig|6666666.65908.peg.566 CDS gi|480984008|gb|AREP01000014.1| 19446 20615 3 + 1170 Integral membrane protein TerC - none -
fig|6666666.65908.peg.567 CDS gi|480984008|gb|AREP01000014.1| 20995 20699 -1 - 297 hypothetical protein - none -
fig|6666666.65908.peg.568 CDS gi|480984008|gb|AREP01000014.1| 21074 21640 2 + 567 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.569 CDS gi|480984008|gb|AREP01000014.1| 21633 22184 3 + 552 Protein Implicated in DNA repair function with RecA and MutS DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.65908.peg.570 CDS gi|480984008|gb|AREP01000014.1| 22233 22589 3 + 357 putative transcription regulator - none -
fig|6666666.65908.peg.571 CDS gi|480984008|gb|AREP01000014.1| 22673 23518 2 + 846 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65908.peg.572 CDS gi|480984008|gb|AREP01000014.1| 24138 23524 -3 - 615 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65908.peg.573 CDS gi|480984008|gb|AREP01000014.1| 24824 24135 -2 - 690 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65908.peg.574 CDS gi|480984008|gb|AREP01000014.1| 25412 24837 -2 - 576 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.65908.peg.575 CDS gi|480984008|gb|AREP01000014.1| 25509 25754 3 + 246 hypothetical protein - none -
fig|6666666.65908.peg.576 CDS gi|480984008|gb|AREP01000014.1| 25957 27102 1 + 1146 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65908.peg.577 CDS gi|480984008|gb|AREP01000014.1| 27102 27695 3 + 594 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65908.peg.578 CDS gi|480984008|gb|AREP01000014.1| 28654 27716 -1 - 939 glutamate transporter permease protein GluD - none -
fig|6666666.65908.peg.579 CDS gi|480984008|gb|AREP01000014.1| 29340 28654 -3 - 687 glutamate ABC-type transporter, permease component - none -
fig|6666666.65908.peg.580 CDS gi|480984008|gb|AREP01000014.1| 30250 29375 -1 - 876 glutamate-binding protein GluB - none -
fig|6666666.65908.peg.581 CDS gi|480984008|gb|AREP01000014.1| 31003 30275 -1 - 729 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.65908.peg.582 CDS gi|480984008|gb|AREP01000014.1| 31192 32718 1 + 1527 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.65908.peg.583 CDS gi|480984008|gb|AREP01000014.1| 32814 33464 3 + 651 Putative membrane protein - none -
fig|6666666.65908.peg.584 CDS gi|480984008|gb|AREP01000014.1| 34288 33461 -1 - 828 No significant database matches - none -
fig|6666666.65908.peg.585 CDS gi|480984008|gb|AREP01000014.1| 35950 34568 -1 - 1383 ATPase involved in DNA repair - none -
fig|6666666.65908.peg.586 CDS gi|480984008|gb|AREP01000014.1| 36331 36065 -1 - 267 hypothetical protein - none -
fig|6666666.65908.peg.587 CDS gi|480984008|gb|AREP01000014.1| 36419 36712 2 + 294 hypothetical protein - none -
fig|6666666.65908.peg.588 CDS gi|480984008|gb|AREP01000014.1| 36709 37614 1 + 906 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.65908.peg.589 CDS gi|480984008|gb|AREP01000014.1| 38073 37627 -3 - 447 hypothetical protein - none -
fig|6666666.65908.peg.590 CDS gi|480984008|gb|AREP01000014.1| 38878 38144 -1 - 735 FIG00546075: hypothetical protein - none -
fig|6666666.65908.peg.591 CDS gi|480984008|gb|AREP01000014.1| 38991 40517 3 + 1527 GTP-binding protein HflX Hfl operon
fig|6666666.65908.peg.592 CDS gi|480984008|gb|AREP01000014.1| 40592 41890 2 + 1299 xanthine/uracil permeases - none -
fig|6666666.65908.peg.593 CDS gi|480984008|gb|AREP01000014.1| 42209 41946 -2 - 264 Phosphocarrier protein of PTS system - none -
fig|6666666.65908.peg.594 CDS gi|480984008|gb|AREP01000014.1| 44349 42256 -3 - 2094 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.65908.peg.595 CDS gi|480984008|gb|AREP01000014.1| 45335 44346 -2 - 990 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65908.peg.596 CDS gi|480984008|gb|AREP01000014.1| 46282 45503 -1 - 780 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65908.peg.597 CDS gi|480984008|gb|AREP01000014.1| 47235 46543 -3 - 693 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65908.peg.598 CDS gi|480984008|gb|AREP01000014.1| 47731 47847 1 + 117 hypothetical protein - none -
fig|6666666.65908.peg.599 CDS gi|480984008|gb|AREP01000014.1| 47984 48439 2 + 456 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.65908.peg.600 CDS gi|480984008|gb|AREP01000014.1| 52345 48440 -1 - 3906 ATP-dependent helicase HrpA - none -
fig|6666666.65908.peg.601 CDS gi|480984008|gb|AREP01000014.1| 52529 53338 2 + 810 hypothetical protein - none -
fig|6666666.65908.peg.602 CDS gi|480984008|gb|AREP01000014.1| 53701 53453 -1 - 249 Mobile element protein - none -
fig|6666666.65908.peg.603 CDS gi|480984011|gb|AREP01000013.1| 359 583 2 + 225 Mobile element protein - none -
fig|6666666.65908.peg.604 CDS gi|480984011|gb|AREP01000013.1| 1005 1283 3 + 279 hypothetical protein - none -
fig|6666666.65908.peg.605 CDS gi|480984011|gb|AREP01000013.1| 1565 1293 -2 - 273 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65908.peg.606 CDS gi|480984011|gb|AREP01000013.1| 2103 1558 -3 - 546 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65908.peg.607 CDS gi|480984011|gb|AREP01000013.1| 2900 2100 -2 - 801 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.65908.peg.608 CDS gi|480984011|gb|AREP01000013.1| 3704 2940 -2 - 765 inositol monophosphatase family protein - none -
fig|6666666.65908.peg.609 CDS gi|480984011|gb|AREP01000013.1| 3777 8387 3 + 4611 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65908.peg.610 CDS gi|480984011|gb|AREP01000013.1| 8412 9206 3 + 795 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65908.peg.611 CDS gi|480984011|gb|AREP01000013.1| 9862 9203 -1 - 660 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65908.peg.612 CDS gi|480984011|gb|AREP01000013.1| 10004 10417 2 + 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.613 CDS gi|480984011|gb|AREP01000013.1| 11819 10407 -2 - 1413 hypothetical protein - none -
fig|6666666.65908.peg.614 CDS gi|480984011|gb|AREP01000013.1| 13580 11946 -2 - 1635 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65908.peg.615 CDS gi|480984011|gb|AREP01000013.1| 13667 13993 2 + 327 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.65908.peg.616 CDS gi|480984011|gb|AREP01000013.1| 14307 13990 -3 - 318 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65908.peg.617 CDS gi|480984011|gb|AREP01000013.1| 14369 16738 2 + 2370 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65908.peg.618 CDS gi|480984011|gb|AREP01000013.1| 17437 16751 -1 - 687 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65908.peg.619 CDS gi|480984011|gb|AREP01000013.1| 20256 17665 -3 - 2592 FIG00545631: hypothetical protein - none -
fig|6666666.65908.peg.620 CDS gi|480984011|gb|AREP01000013.1| 20927 20259 -2 - 669 ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.621 CDS gi|480984011|gb|AREP01000013.1| 21466 20924 -1 - 543 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65908.peg.622 CDS gi|480984011|gb|AREP01000013.1| 22353 21607 -3 - 747 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65908.peg.623 CDS gi|480984011|gb|AREP01000013.1| 22839 24047 3 + 1209 FIG021574: Possible membrane protein related to de Novo purine biosynthesis A hypothetical coupled to de Novo Purine Biosynthesis
fig|6666666.65908.peg.624 CDS gi|480984011|gb|AREP01000013.1| 24115 24645 1 + 531 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65908.peg.625 CDS gi|480984011|gb|AREP01000013.1| 24650 26203 2 + 1554 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65908.peg.626 CDS gi|480984011|gb|AREP01000013.1| 26267 26956 2 + 690 hypothetical protein - none -
fig|6666666.65908.peg.627 CDS gi|480984011|gb|AREP01000013.1| 27085 27840 1 + 756 hypothetical protein - none -
fig|6666666.65908.peg.628 CDS gi|480984011|gb|AREP01000013.1| 28181 27936 -2 - 246 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.65908.peg.629 CDS gi|480984011|gb|AREP01000013.1| 28490 28200 -2 - 291 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.65908.peg.630 CDS gi|480984011|gb|AREP01000013.1| 28673 28509 -2 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65908.peg.631 CDS gi|480984011|gb|AREP01000013.1| 28817 28677 -2 - 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65908.peg.632 CDS gi|480984011|gb|AREP01000013.1| 28848 29054 3 + 207 hypothetical protein - none -
fig|6666666.65908.peg.633 CDS gi|480984011|gb|AREP01000013.1| 29366 29635 2 + 270 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65908.peg.634 CDS gi|480984011|gb|AREP01000013.1| 29681 29854 2 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65908.peg.635 CDS gi|480984011|gb|AREP01000013.1| 30039 30737 3 + 699 two-component system, response regulator - none -
fig|6666666.65908.peg.636 CDS gi|480984011|gb|AREP01000013.1| 30734 32164 2 + 1431 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.65908.peg.637 CDS gi|480984011|gb|AREP01000013.1| 32494 33579 1 + 1086 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.65908.peg.638 CDS gi|480984011|gb|AREP01000013.1| 33638 34201 2 + 564 molybdopterin biosynthesis enzyme - none -
fig|6666666.65908.peg.639 CDS gi|480984011|gb|AREP01000013.1| 34235 34468 2 + 234 hypothetical protein - none -
fig|6666666.65908.peg.640 CDS gi|480984011|gb|AREP01000013.1| 34949 34503 -2 - 447 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65908.peg.641 CDS gi|480984011|gb|AREP01000013.1| 35720 35046 -2 - 675 Heat shock protein 22.5 (Hsp22.5) - none -
fig|6666666.65908.peg.642 CDS gi|480984011|gb|AREP01000013.1| 36372 35776 -3 - 597 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65908.peg.643 CDS gi|480984011|gb|AREP01000013.1| 36434 37372 2 + 939 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65908.peg.644 CDS gi|480984011|gb|AREP01000013.1| 37410 38684 3 + 1275 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65908.peg.645 CDS gi|480984011|gb|AREP01000013.1| 38833 39405 1 + 573 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.65908.peg.646 CDS gi|480984011|gb|AREP01000013.1| 39510 40619 3 + 1110 FIG00544639: hypothetical protein - none -
fig|6666666.65908.peg.647 CDS gi|480984011|gb|AREP01000013.1| 41227 40616 -1 - 612 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65908.peg.648 CDS gi|480984011|gb|AREP01000013.1| 41719 41234 -1 - 486 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65908.peg.649 CDS gi|480984011|gb|AREP01000013.1| 41775 42182 3 + 408 FIG00544115: hypothetical protein - none -
fig|6666666.65908.peg.650 CDS gi|480984011|gb|AREP01000013.1| 42175 42870 1 + 696 hypothetical membrane protein - none -
fig|6666666.65908.peg.651 CDS gi|480984011|gb|AREP01000013.1| 44379 42901 -3 - 1479 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.652 CDS gi|480984011|gb|AREP01000013.1| 44571 45425 3 + 855 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65908.peg.653 CDS gi|480984011|gb|AREP01000013.1| 45590 47419 2 + 1830 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65908.peg.654 CDS gi|480984011|gb|AREP01000013.1| 47621 49480 2 + 1860 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65908.peg.655 CDS gi|480984011|gb|AREP01000013.1| 49535 51388 2 + 1854 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65908.peg.656 CDS gi|480984011|gb|AREP01000013.1| 51389 52561 2 + 1173 putative transport protein - none -
fig|6666666.65908.peg.657 CDS gi|480984011|gb|AREP01000013.1| 52572 54695 3 + 2124 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.65908.peg.658 CDS gi|480984011|gb|AREP01000013.1| 55092 54700 -3 - 393 hypothetical protein - none -
fig|6666666.65908.peg.659 CDS gi|480984011|gb|AREP01000013.1| 55129 55974 1 + 846 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65908.peg.660 CDS gi|480984011|gb|AREP01000013.1| 56147 57325 2 + 1179 Cell wall-binding protein - none -
fig|6666666.65908.peg.661 CDS gi|480984011|gb|AREP01000013.1| 57348 58199 3 + 852 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.65908.peg.662 CDS gi|480984011|gb|AREP01000013.1| 58200 59216 3 + 1017 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65908.peg.663 CDS gi|480984011|gb|AREP01000013.1| 59226 61037 3 + 1812 ABC transporter, ATP-binding protein - none -
fig|6666666.65908.peg.664 CDS gi|480984011|gb|AREP01000013.1| 61038 62687 3 + 1650 FIG00544882: hypothetical protein - none -
fig|6666666.65908.peg.665 CDS gi|480984011|gb|AREP01000013.1| 62717 63040 2 + 324 FIG00544339: hypothetical protein - none -
fig|6666666.65908.peg.666 CDS gi|480984011|gb|AREP01000013.1| 63085 63939 1 + 855 FIG00545275: hypothetical protein - none -
fig|6666666.65908.peg.667 CDS gi|480984011|gb|AREP01000013.1| 64508 63936 -2 - 573 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.65908.peg.668 CDS gi|480984011|gb|AREP01000013.1| 65315 64515 -2 - 801 FIG00544241: hypothetical protein - none -
fig|6666666.65908.peg.669 CDS gi|480984011|gb|AREP01000013.1| 65351 66331 2 + 981 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65908.peg.670 CDS gi|480984011|gb|AREP01000013.1| 66448 66335 -1 - 114 hypothetical protein - none -
fig|6666666.65908.peg.671 CDS gi|480984011|gb|AREP01000013.1| 67510 66512 -1 - 999 hypothetical protein - none -
fig|6666666.65908.peg.672 CDS gi|480984011|gb|AREP01000013.1| 67692 69161 3 + 1470 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65908.peg.673 CDS gi|480984011|gb|AREP01000013.1| 69546 69163 -3 - 384 Glycosyltransferase - none -
fig|6666666.65908.peg.674 CDS gi|480984014|gb|AREP01000012.1| 820 686 -1 - 135 hypothetical protein - none -
fig|6666666.65908.peg.675 CDS gi|480984014|gb|AREP01000012.1| 920 1225 2 + 306 hypothetical protein - none -
fig|6666666.65908.peg.676 CDS gi|480984014|gb|AREP01000012.1| 1278 2789 3 + 1512 hypothetical protein - none -
fig|6666666.65908.peg.677 CDS gi|480984014|gb|AREP01000012.1| 3015 4226 3 + 1212 Macrolide-specific efflux protein macA precursor - none -
fig|6666666.65908.peg.678 CDS gi|480984014|gb|AREP01000012.1| 4226 4936 2 + 711 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65908.peg.679 CDS gi|480984014|gb|AREP01000012.1| 4939 6258 1 + 1320 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) - none -
fig|6666666.65908.peg.680 CDS gi|480984014|gb|AREP01000012.1| 7826 6285 -2 - 1542 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65908.peg.681 CDS gi|480984014|gb|AREP01000012.1| 8491 7886 -1 - 606 hypothetical protein - none -
fig|6666666.65908.peg.682 CDS gi|480984014|gb|AREP01000012.1| 8817 9317 3 + 501 hypothetical protein - none -
fig|6666666.65908.peg.683 CDS gi|480984014|gb|AREP01000012.1| 9413 10669 2 + 1257 serine/threonine protein kinase - none -
fig|6666666.65908.peg.684 CDS gi|480984014|gb|AREP01000012.1| 10730 12868 2 + 2139 Putative phosphatase - none -
fig|6666666.65908.peg.685 CDS gi|480984014|gb|AREP01000012.1| 13737 12937 -3 - 801 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65908.peg.686 CDS gi|480984014|gb|AREP01000012.1| 14443 13739 -1 - 705 Ketopantoate reductase PanG (EC 1.1.1.169) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65908.peg.687 CDS gi|480984014|gb|AREP01000012.1| 15381 14440 -3 - 942 hypothetical protein - none -
fig|6666666.65908.peg.688 CDS gi|480984014|gb|AREP01000012.1| 15859 15392 -1 - 468 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65908.peg.689 CDS gi|480984014|gb|AREP01000012.1| 16341 15856 -3 - 486 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65908.peg.690 CDS gi|480984014|gb|AREP01000012.1| 16754 16341 -2 - 414 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65908.peg.691 CDS gi|480984014|gb|AREP01000012.1| 17641 16754 -1 - 888 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65908.peg.692 CDS gi|480984014|gb|AREP01000012.1| 18240 17644 -3 - 597 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65908.peg.693 CDS gi|480984014|gb|AREP01000012.1| 20717 18243 -2 - 2475 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65908.peg.694 CDS gi|480984014|gb|AREP01000012.1| 21399 20800 -3 - 600 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65908.peg.695 CDS gi|480984014|gb|AREP01000012.1| 22456 21503 -1 - 954 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65908.peg.696 CDS gi|480984014|gb|AREP01000012.1| 23130 22453 -3 - 678 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65908.peg.697 CDS gi|480984014|gb|AREP01000012.1| 23780 23127 -2 - 654 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65908.peg.698 CDS gi|480984014|gb|AREP01000012.1| 24601 23777 -1 - 825 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65908.peg.699 CDS gi|480984014|gb|AREP01000012.1| 25469 24645 -2 - 825 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65908.peg.700 CDS gi|480984014|gb|AREP01000012.1| 26809 25547 -1 - 1263 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.701 CDS gi|480984014|gb|AREP01000012.1| 26896 27429 1 + 534 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65908.peg.702 CDS gi|480984014|gb|AREP01000012.1| 27479 27769 2 + 291 rhodanese-related sulfurtransferase - none -
fig|6666666.65908.peg.703 CDS gi|480984014|gb|AREP01000012.1| 28024 28473 1 + 450 Transcriptional regulator, MarR family - none -
fig|6666666.65908.peg.704 CDS gi|480984014|gb|AREP01000012.1| 28473 32327 3 + 3855 putative non-ribosomal peptide synthetase - none -
fig|6666666.65908.peg.705 CDS gi|480984014|gb|AREP01000012.1| 33164 32349 -2 - 816 Antigen 85-B precursor (85B) (Extracellular alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl transferase 85B) (EC 2.3.1.-) - none -
fig|6666666.65908.peg.706 CDS gi|480984014|gb|AREP01000012.1| 34444 33695 -1 - 750 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.707 CDS gi|480984014|gb|AREP01000012.1| 35336 34437 -2 - 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65908.peg.708 CDS gi|480984014|gb|AREP01000012.1| 35729 35583 -2 - 147 hypothetical protein - none -
fig|6666666.65908.peg.709 CDS gi|480984014|gb|AREP01000012.1| 35998 35798 -1 - 201 hypothetical protein - none -
fig|6666666.65908.peg.710 CDS gi|480984014|gb|AREP01000012.1| 38043 36406 -3 - 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65908.peg.711 CDS gi|480984014|gb|AREP01000012.1| 38241 39557 3 + 1317 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65908.peg.712 CDS gi|480984014|gb|AREP01000012.1| 39752 42838 2 + 3087 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65908.peg.713 CDS gi|480984014|gb|AREP01000012.1| 42839 43330 2 + 492 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65908.peg.714 CDS gi|480984014|gb|AREP01000012.1| 43323 45155 3 + 1833 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65908.peg.715 CDS gi|480984014|gb|AREP01000012.1| 45155 45664 2 + 510 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65908.peg.716 CDS gi|480984014|gb|AREP01000012.1| 45665 45940 2 + 276 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65908.peg.717 CDS gi|480984014|gb|AREP01000012.1| 45941 46351 2 + 411 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65908.peg.718 CDS gi|480984014|gb|AREP01000012.1| 47484 46348 -3 - 1137 Putative cytoplasmic protein - none -
fig|6666666.65908.peg.719 CDS gi|480984014|gb|AREP01000012.1| 48314 47484 -2 - 831 hypothetical protein - none -
fig|6666666.65908.peg.720 CDS gi|480984014|gb|AREP01000012.1| 48549 48298 -3 - 252 hypothetical protein - none -
fig|6666666.65908.peg.721 CDS gi|480984014|gb|AREP01000012.1| 48548 49120 2 + 573 Peptide deformylase (EC 3.5.1.88) CBSS-89187.3.peg.2957;
Translation termination factors bacterial
fig|6666666.65908.peg.722 CDS gi|480984014|gb|AREP01000012.1| 49120 50178 1 + 1059 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65908.peg.723 CDS gi|480984014|gb|AREP01000012.1| 50189 50986 2 + 798 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65908.peg.724 CDS gi|480984014|gb|AREP01000012.1| 50986 52467 1 + 1482 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.725 CDS gi|480984014|gb|AREP01000012.1| 53466 52543 -3 - 924 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.65908.peg.726 CDS gi|480984014|gb|AREP01000012.1| 55279 53510 -1 - 1770 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.65908.peg.727 CDS gi|480984014|gb|AREP01000012.1| 55487 56632 2 + 1146 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.65908.peg.728 CDS gi|480984014|gb|AREP01000012.1| 57404 56670 -2 - 735 Putative ABC transport system membrane protein - none -
fig|6666666.65908.peg.729 CDS gi|480984014|gb|AREP01000012.1| 58337 57405 -2 - 933 putative ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.730 CDS gi|480984014|gb|AREP01000012.1| 58824 58330 -3 - 495 mutT3 - none -
fig|6666666.65908.peg.731 CDS gi|480984014|gb|AREP01000012.1| 58879 60390 1 + 1512 FIG00543876: hypothetical protein - none -
fig|6666666.65908.peg.732 CDS gi|480984014|gb|AREP01000012.1| 60390 61376 3 + 987 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.65908.peg.733 CDS gi|480984014|gb|AREP01000012.1| 61369 63744 1 + 2376 serine/threonine protein kinase - none -
fig|6666666.65908.peg.734 CDS gi|480984014|gb|AREP01000012.1| 63973 64911 1 + 939 hypothetical protein - none -
fig|6666666.65908.peg.735 CDS gi|480984014|gb|AREP01000012.1| 66242 65046 -2 - 1197 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.736 CDS gi|480984014|gb|AREP01000012.1| 67618 66242 -1 - 1377 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.737 CDS gi|480984014|gb|AREP01000012.1| 67792 69153 1 + 1362 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65908.peg.738 CDS gi|480984014|gb|AREP01000012.1| 69217 69666 1 + 450 acetyltransferase, GNAT family - none -
fig|6666666.65908.peg.739 CDS gi|480984014|gb|AREP01000012.1| 70286 69975 -2 - 312 hypothetical protein - none -
fig|6666666.65908.peg.740 CDS gi|480984014|gb|AREP01000012.1| 70594 70286 -1 - 309 hypothetical protein - none -
fig|6666666.65908.peg.741 CDS gi|480984014|gb|AREP01000012.1| 72614 71439 -2 - 1176 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.65908.peg.742 CDS gi|480984014|gb|AREP01000012.1| 74286 72739 -3 - 1548 hypothetical protein - none -
fig|6666666.65908.peg.743 CDS gi|480984014|gb|AREP01000012.1| 75774 74476 -3 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65908.peg.744 CDS gi|480984014|gb|AREP01000012.1| 75837 76775 3 + 939 FIG00545467: hypothetical protein - none -
fig|6666666.65908.peg.745 CDS gi|480984014|gb|AREP01000012.1| 77170 77988 1 + 819 hypothetical protein - none -
fig|6666666.65908.peg.746 CDS gi|480984014|gb|AREP01000012.1| 78146 78619 2 + 474 hypothetical protein - none -
fig|6666666.65908.peg.747 CDS gi|480984014|gb|AREP01000012.1| 78725 79147 2 + 423 hypothetical protein - none -
fig|6666666.65908.peg.748 CDS gi|480984014|gb|AREP01000012.1| 79175 79939 2 + 765 hypothetical protein - none -
fig|6666666.65908.peg.749 CDS gi|480984014|gb|AREP01000012.1| 81109 79940 -1 - 1170 FIG00545517: hypothetical protein - none -
fig|6666666.65908.peg.750 CDS gi|480984014|gb|AREP01000012.1| 82246 81119 -1 - 1128 hypothetical protein - none -
fig|6666666.65908.peg.751 CDS gi|480984014|gb|AREP01000012.1| 83431 82397 -1 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65908.peg.752 CDS gi|480984014|gb|AREP01000012.1| 84724 83543 -1 - 1182 fructose-bisphosphate aldolase family protein - none -
fig|6666666.65908.peg.753 CDS gi|480984014|gb|AREP01000012.1| 85424 84768 -2 - 657 probable RNA methyltransferase - none -
fig|6666666.65908.peg.754 CDS gi|480984014|gb|AREP01000012.1| 85971 85417 -3 - 555 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.755 CDS gi|480984014|gb|AREP01000012.1| 87127 85982 -1 - 1146 FIG00544840: hypothetical protein - none -
fig|6666666.65908.peg.756 CDS gi|480984014|gb|AREP01000012.1| 88110 87271 -3 - 840 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65908.peg.757 CDS gi|480984014|gb|AREP01000012.1| 88576 88130 -1 - 447 hypothetical protein - none -
fig|6666666.65908.peg.758 CDS gi|480984014|gb|AREP01000012.1| 91135 88586 -1 - 2550 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65908.peg.759 CDS gi|480984014|gb|AREP01000012.1| 92908 91448 -1 - 1461 hypothetical protein - none -
fig|6666666.65908.peg.760 CDS gi|480984014|gb|AREP01000012.1| 93122 92970 -2 - 153 Mobile element protein - none -
fig|6666666.65908.peg.761 CDS gi|480984016|gb|AREP01000011.1| 2165 957 -2 - 1209 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65908.peg.762 CDS gi|480984016|gb|AREP01000011.1| 3077 2238 -2 - 840 Putative transcriptional regulator - none -
fig|6666666.65908.peg.763 CDS gi|480984016|gb|AREP01000011.1| 3435 4370 3 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65908.peg.764 CDS gi|480984016|gb|AREP01000011.1| 4505 5074 2 + 570 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65908.peg.765 CDS gi|480984016|gb|AREP01000011.1| 5377 5084 -1 - 294 hypothetical protein - none -
fig|6666666.65908.peg.766 CDS gi|480984016|gb|AREP01000011.1| 6555 6412 -3 - 144 hypothetical protein - none -
fig|6666666.65908.peg.767 CDS gi|480984016|gb|AREP01000011.1| 6514 6714 1 + 201 hypothetical protein - none -
fig|6666666.65908.peg.768 CDS gi|480984016|gb|AREP01000011.1| 6991 6719 -1 - 273 hypothetical protein - none -
fig|6666666.65908.peg.769 CDS gi|480984016|gb|AREP01000011.1| 8060 7068 -2 - 993 membrane transport protein - none -
fig|6666666.65908.peg.770 CDS gi|480984016|gb|AREP01000011.1| 8675 9646 2 + 972 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65908.peg.771 CDS gi|480984016|gb|AREP01000011.1| 9713 10249 2 + 537 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65908.peg.772 CDS gi|480984016|gb|AREP01000011.1| 10249 11253 1 + 1005 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65908.peg.773 CDS gi|480984016|gb|AREP01000011.1| 11301 12809 3 + 1509 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65908.peg.774 CDS gi|480984016|gb|AREP01000011.1| 12806 14332 2 + 1527 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65908.peg.775 CDS gi|480984016|gb|AREP01000011.1| 15084 14329 -3 - 756 N-acetylmannosaminyltransferase (EC 2.4.1.187) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.65908.peg.776 CDS gi|480984016|gb|AREP01000011.1| 18478 15074 -1 - 3405 hypothetical protein - none -
fig|6666666.65908.peg.777 CDS gi|480984016|gb|AREP01000011.1| 21120 19594 -3 - 1527 Heteropolysaccharide repeat unit export protein Rhamnose containing glycans
fig|6666666.65908.peg.778 CDS gi|480984016|gb|AREP01000011.1| 21806 21117 -2 - 690 hypothetical protein - none -
fig|6666666.65908.peg.779 CDS gi|480984016|gb|AREP01000011.1| 23104 21818 -1 - 1287 hypothetical protein - none -
fig|6666666.65908.peg.780 CDS gi|480984016|gb|AREP01000011.1| 24342 23107 -3 - 1236 hypothetical protein - none -
fig|6666666.65908.peg.781 CDS gi|480984016|gb|AREP01000011.1| 25525 24353 -1 - 1173 hypothetical protein - none -
fig|6666666.65908.peg.782 CDS gi|480984016|gb|AREP01000011.1| 26454 25546 -3 - 909 glycosyl transferase family 2 - none -
fig|6666666.65908.peg.783 CDS gi|480984016|gb|AREP01000011.1| 27235 26441 -1 - 795 FIG00355852: hypothetical protein - none -
fig|6666666.65908.peg.784 CDS gi|480984016|gb|AREP01000011.1| 27525 27232 -3 - 294 Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) Rhamnose containing glycans
fig|6666666.65908.peg.785 CDS gi|480984016|gb|AREP01000011.1| 28440 27760 -3 - 681 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.65908.peg.786 CDS gi|480984016|gb|AREP01000011.1| 30417 28918 -3 - 1500 putative coenzyme A transferase - none -
fig|6666666.65908.peg.787 CDS gi|480984016|gb|AREP01000011.1| 30713 31897 2 + 1185 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65908.peg.788 CDS gi|480984016|gb|AREP01000011.1| 31990 32733 1 + 744 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65908.peg.789 CDS gi|480984016|gb|AREP01000011.1| 33610 32837 -1 - 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65908.peg.790 CDS gi|480984016|gb|AREP01000011.1| 34566 33646 -3 - 921 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65908.peg.791 CDS gi|480984016|gb|AREP01000011.1| 35683 34586 -1 - 1098 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65908.peg.792 CDS gi|480984016|gb|AREP01000011.1| 36987 35851 -3 - 1137 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65908.peg.793 CDS gi|480984016|gb|AREP01000011.1| 38226 37327 -3 - 900 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65908.peg.794 CDS gi|480984016|gb|AREP01000011.1| 38306 39049 2 + 744 FIG00544976: hypothetical protein - none -
fig|6666666.65908.peg.795 CDS gi|480984016|gb|AREP01000011.1| 39006 39710 3 + 705 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65908.peg.796 CDS gi|480984016|gb|AREP01000011.1| 40648 39707 -1 - 942 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65908.peg.797 CDS gi|480984016|gb|AREP01000011.1| 40647 41804 3 + 1158 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65908.peg.798 CDS gi|480984016|gb|AREP01000011.1| 41953 42174 1 + 222 FIG00544089: hypothetical protein - none -
fig|6666666.65908.peg.799 CDS gi|480984016|gb|AREP01000011.1| 43333 42257 -1 - 1077 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65908.peg.800 CDS gi|480984016|gb|AREP01000011.1| 44875 43334 -1 - 1542 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65908.peg.801 CDS gi|480984016|gb|AREP01000011.1| 45049 44891 -1 - 159 hypothetical protein - none -
fig|6666666.65908.peg.802 CDS gi|480984016|gb|AREP01000011.1| 45394 46401 1 + 1008 acyl-CoA hydrolase - none -
fig|6666666.65908.peg.803 CDS gi|480984016|gb|AREP01000011.1| 46471 47532 1 + 1062 Antigen 85-B precursor (85B) (Extracellular alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl transferase 85B) (EC 2.3.1.-) - none -
fig|6666666.65908.peg.804 CDS gi|480984016|gb|AREP01000011.1| 47499 47630 3 + 132 hypothetical protein - none -
fig|6666666.65908.peg.805 CDS gi|480984016|gb|AREP01000011.1| 47727 50399 3 + 2673 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.65908.peg.806 CDS gi|480984016|gb|AREP01000011.1| 50901 50410 -3 - 492 Glutathione peroxidase family protein - none -
fig|6666666.65908.peg.807 CDS gi|480984016|gb|AREP01000011.1| 51611 50931 -2 - 681 FIG00546625: hypothetical protein - none -
fig|6666666.65908.peg.808 CDS gi|480984016|gb|AREP01000011.1| 53801 51657 -2 - 2145 Protease II (EC 3.4.21.83) - none -
fig|6666666.65908.peg.809 CDS gi|480984016|gb|AREP01000011.1| 54721 53825 -1 - 897 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65908.peg.810 CDS gi|480984016|gb|AREP01000011.1| 56197 54767 -1 - 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65908.peg.811 CDS gi|480984016|gb|AREP01000011.1| 57339 56224 -3 - 1116 Valine--pyruvate aminotransferase (EC 2.6.1.66) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65908.peg.812 CDS gi|480984016|gb|AREP01000011.1| 58636 57392 -1 - 1245 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65908.peg.813 CDS gi|480984016|gb|AREP01000011.1| 58669 59094 1 + 426 HIT family protein - none -
fig|6666666.65908.peg.814 CDS gi|480984016|gb|AREP01000011.1| 60524 59091 -2 - 1434 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.65908.peg.815 CDS gi|480984016|gb|AREP01000011.1| 61267 60536 -1 - 732 two-component system, response regulator - none -
fig|6666666.65908.peg.816 CDS gi|480984016|gb|AREP01000011.1| 61392 62735 3 + 1344 FIG00544776: hypothetical protein - none -
fig|6666666.65908.peg.817 CDS gi|480984016|gb|AREP01000011.1| 62779 64014 1 + 1236 Permease - none -
fig|6666666.65908.peg.818 CDS gi|480984016|gb|AREP01000011.1| 65123 64152 -2 - 972 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.819 CDS gi|480984016|gb|AREP01000011.1| 65229 66791 3 + 1563 Putative amino acid export carrier protein - none -
fig|6666666.65908.peg.820 CDS gi|480984016|gb|AREP01000011.1| 66841 67200 1 + 360 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65908.peg.821 CDS gi|480984016|gb|AREP01000011.1| 67204 68520 1 + 1317 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.65908.peg.822 CDS gi|480984016|gb|AREP01000011.1| 68510 68995 2 + 486 hypothetical protein - none -
fig|6666666.65908.peg.823 CDS gi|480984016|gb|AREP01000011.1| 68992 69729 1 + 738 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65908.peg.824 CDS gi|480984016|gb|AREP01000011.1| 70729 69689 -1 - 1041 Transcriptional regulator, LacI family - none -
fig|6666666.65908.peg.825 CDS gi|480984016|gb|AREP01000011.1| 70896 71915 3 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65908.peg.826 CDS gi|480984016|gb|AREP01000011.1| 72001 72702 1 + 702 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65908.peg.827 CDS gi|480984016|gb|AREP01000011.1| 72703 73566 1 + 864 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65908.peg.828 CDS gi|480984016|gb|AREP01000011.1| 74729 73575 -2 - 1155 hypothetical protein - none -
fig|6666666.65908.peg.829 CDS gi|480984016|gb|AREP01000011.1| 75800 74856 -2 - 945 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.65908.peg.830 CDS gi|480984016|gb|AREP01000011.1| 77195 75804 -2 - 1392 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.65908.peg.831 CDS gi|480984016|gb|AREP01000011.1| 78014 77220 -2 - 795 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.65908.peg.832 CDS gi|480984016|gb|AREP01000011.1| 78545 78045 -2 - 501 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65908.peg.833 CDS gi|480984016|gb|AREP01000011.1| 79277 78558 -2 - 720 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.65908.peg.834 CDS gi|480984016|gb|AREP01000011.1| 79891 79295 -1 - 597 CarD-like transcriptional regulator - none -
fig|6666666.65908.peg.835 CDS gi|480984016|gb|AREP01000011.1| 80190 80777 3 + 588 FIG00544037: hypothetical protein - none -
fig|6666666.65908.peg.836 CDS gi|480984016|gb|AREP01000011.1| 80863 82260 1 + 1398 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65908.peg.837 CDS gi|480984016|gb|AREP01000011.1| 82272 83336 3 + 1065 DNA integrity scanning protein disA - none -
fig|6666666.65908.peg.838 CDS gi|480984016|gb|AREP01000011.1| 84047 83343 -2 - 705 FIG00544149: hypothetical protein - none -
fig|6666666.65908.peg.839 CDS gi|480984016|gb|AREP01000011.1| 84738 84124 -3 - 615 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.65908.peg.840 CDS gi|480984016|gb|AREP01000011.1| 84769 85656 1 + 888 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65908.peg.841 CDS gi|480984016|gb|AREP01000011.1| 85827 85657 -3 - 171 FIG00543978: hypothetical protein - none -
fig|6666666.65908.peg.842 CDS gi|480984016|gb|AREP01000011.1| 85831 87189 1 + 1359 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65908.peg.843 CDS gi|480984016|gb|AREP01000011.1| 88888 87203 -1 - 1686 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.65908.peg.844 CDS gi|480984016|gb|AREP01000011.1| 89732 88893 -2 - 840 Beta-glucoside bgl operon antiterminator, BglG family - none -
fig|6666666.65908.peg.845 CDS gi|480984016|gb|AREP01000011.1| 91806 89755 -3 - 2052 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) - none -
fig|6666666.65908.peg.846 CDS gi|480984016|gb|AREP01000011.1| 94811 92073 -2 - 2739 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65908.peg.847 CDS gi|480984016|gb|AREP01000011.1| 95673 95461 -3 - 213 Mobile element protein - none -
fig|6666666.65908.peg.848 CDS gi|480984019|gb|AREP01000010.1| 51 983 3 + 933 hypothetical protein - none -
fig|6666666.65908.peg.849 CDS gi|480984019|gb|AREP01000010.1| 997 1764 1 + 768 hypothetical protein - none -
fig|6666666.65908.peg.850 CDS gi|480984019|gb|AREP01000010.1| 1816 2802 1 + 987 Mobile element protein - none -
fig|6666666.65908.peg.851 CDS gi|480984019|gb|AREP01000010.1| 3693 2767 -3 - 927 hypothetical protein - none -
fig|6666666.65908.peg.852 CDS gi|480984019|gb|AREP01000010.1| 4755 3844 -3 - 912 Mrr restriction system protein - none -
fig|6666666.65908.peg.853 CDS gi|480984019|gb|AREP01000010.1| 5930 4755 -2 - 1176 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65908.peg.854 CDS gi|480984019|gb|AREP01000010.1| 7504 5930 -1 - 1575 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65908.peg.855 CDS gi|480984019|gb|AREP01000010.1| 8775 7633 -3 - 1143 Transcriptional regulator - none -
fig|6666666.65908.peg.856 CDS gi|480984019|gb|AREP01000010.1| 9013 8747 -1 - 267 hypothetical protein - none -
fig|6666666.65908.peg.857 CDS gi|480984019|gb|AREP01000010.1| 10783 9653 -1 - 1131 hypothetical protein - none -
fig|6666666.65908.peg.858 CDS gi|480984019|gb|AREP01000010.1| 10992 10870 -3 - 123 hypothetical protein - none -
fig|6666666.65908.peg.859 CDS gi|480984019|gb|AREP01000010.1| 11616 11494 -3 - 123 hypothetical protein - none -
fig|6666666.65908.peg.860 CDS gi|480984019|gb|AREP01000010.1| 11567 11770 2 + 204 hypothetical protein - none -
fig|6666666.65908.peg.861 CDS gi|480984019|gb|AREP01000010.1| 12616 11855 -1 - 762 hypothetical protein - none -
fig|6666666.65908.peg.862 CDS gi|480984019|gb|AREP01000010.1| 13167 12832 -3 - 336 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.65908.peg.863 CDS gi|480984019|gb|AREP01000010.1| 13447 13334 -1 - 114 hypothetical protein - none -
fig|6666666.65908.peg.864 CDS gi|480984019|gb|AREP01000010.1| 15861 13444 -3 - 2418 hypothetical protein - none -
fig|6666666.65908.peg.865 CDS gi|480984019|gb|AREP01000010.1| 16224 15988 -3 - 237 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65908.peg.866 CDS gi|480984019|gb|AREP01000010.1| 16998 16237 -3 - 762 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65908.peg.867 CDS gi|480984019|gb|AREP01000010.1| 17572 17015 -1 - 558 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65908.peg.868 CDS gi|480984019|gb|AREP01000010.1| 17848 17720 -1 - 129 hypothetical protein - none -
fig|6666666.65908.peg.869 CDS gi|480984019|gb|AREP01000010.1| 19028 17937 -2 - 1092 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.65908.peg.870 CDS gi|480984019|gb|AREP01000010.1| 19408 19256 -1 - 153 hypothetical protein - none -
fig|6666666.65908.peg.871 CDS gi|480984019|gb|AREP01000010.1| 19855 19517 -1 - 339 hypothetical protein - none -
fig|6666666.65908.peg.872 CDS gi|480984019|gb|AREP01000010.1| 20274 19900 -3 - 375 hypothetical protein - none -
fig|6666666.65908.peg.873 CDS gi|480984019|gb|AREP01000010.1| 20330 20725 2 + 396 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.65908.peg.874 CDS gi|480984019|gb|AREP01000010.1| 20798 22060 2 + 1263 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.65908.peg.875 CDS gi|480984019|gb|AREP01000010.1| 22116 23369 3 + 1254 hypothetical protein - none -
fig|6666666.65908.peg.876 CDS gi|480984019|gb|AREP01000010.1| 23400 24188 3 + 789 FIG00547443: hypothetical protein - none -
fig|6666666.65908.peg.877 CDS gi|480984019|gb|AREP01000010.1| 26207 24342 -2 - 1866 hypothetical protein - none -
fig|6666666.65908.peg.878 CDS gi|480984019|gb|AREP01000010.1| 27820 26546 -1 - 1275 putative transmembrane symporter - none -
fig|6666666.65908.peg.879 CDS gi|480984019|gb|AREP01000010.1| 28017 28457 3 + 441 putative tryptophan transpoter - none -
fig|6666666.65908.peg.880 CDS gi|480984019|gb|AREP01000010.1| 28710 30272 3 + 1563 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65908.peg.881 CDS gi|480984019|gb|AREP01000010.1| 30269 30922 2 + 654 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65908.peg.882 CDS gi|480984019|gb|AREP01000010.1| 30926 31954 2 + 1029 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65908.peg.883 CDS gi|480984019|gb|AREP01000010.1| 31947 33368 3 + 1422 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65908.peg.884 CDS gi|480984019|gb|AREP01000010.1| 33393 34655 3 + 1263 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65908.peg.885 CDS gi|480984019|gb|AREP01000010.1| 34658 35500 2 + 843 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65908.peg.886 CDS gi|480984019|gb|AREP01000010.1| 35697 35575 -3 - 123 hypothetical protein - none -
fig|6666666.65908.peg.887 CDS gi|480984019|gb|AREP01000010.1| 36416 37309 2 + 894 putative ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.888 CDS gi|480984019|gb|AREP01000010.1| 37312 38901 1 + 1590 PROBABLE TETRONASIN-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER - none -
fig|6666666.65908.peg.889 CDS gi|480984019|gb|AREP01000010.1| 38942 39286 2 + 345 Putative iron-sulphur protein - none -
fig|6666666.65908.peg.890 CDS gi|480984019|gb|AREP01000010.1| 40342 39296 -1 - 1047 NADH-dependent flavin oxidoreductase - none -
fig|6666666.65908.peg.891 CDS gi|480984019|gb|AREP01000010.1| 40403 41395 2 + 993 Sodium - Bile acid symporter CBSS-349102.4.peg.3442
fig|6666666.65908.peg.892 CDS gi|480984019|gb|AREP01000010.1| 41406 41711 3 + 306 No significant database matches - none -
fig|6666666.65908.peg.893 CDS gi|480984019|gb|AREP01000010.1| 42049 41708 -1 - 342 hypothetical membrane protein - none -
fig|6666666.65908.peg.894 CDS gi|480984019|gb|AREP01000010.1| 42816 42049 -3 - 768 Branched-chain amino acid transport protein azlC - none -
fig|6666666.65908.peg.895 CDS gi|480984019|gb|AREP01000010.1| 43438 42830 -1 - 609 Putative transcriptional regulator - none -
fig|6666666.65908.peg.896 CDS gi|480984019|gb|AREP01000010.1| 44879 43431 -2 - 1449 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65908.peg.897 CDS gi|480984019|gb|AREP01000010.1| 45405 45908 3 + 504 MutT/nudix family protein - none -
fig|6666666.65908.peg.898 CDS gi|480984019|gb|AREP01000010.1| 45980 48556 2 + 2577 probable secreted protein. - none -
fig|6666666.65908.peg.899 CDS gi|480984019|gb|AREP01000010.1| 48643 52173 1 + 3531 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65908.peg.900 CDS gi|480984019|gb|AREP01000010.1| 52325 52921 2 + 597 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.65908.peg.901 CDS gi|480984019|gb|AREP01000010.1| 53005 53958 1 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65908.peg.902 CDS gi|480984019|gb|AREP01000010.1| 53988 54311 3 + 324 Thioredoxin - none -
fig|6666666.65908.peg.903 CDS gi|480984019|gb|AREP01000010.1| 54423 55604 3 + 1182 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.65908.peg.904 CDS gi|480984019|gb|AREP01000010.1| 57142 55616 -1 - 1527 hypothetical protein - none -
fig|6666666.65908.peg.905 CDS gi|480984019|gb|AREP01000010.1| 57879 57223 -3 - 657 FIG007808: hypothetical protein - none -
fig|6666666.65908.peg.906 CDS gi|480984019|gb|AREP01000010.1| 59000 57891 -2 - 1110 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65908.peg.907 CDS gi|480984019|gb|AREP01000010.1| 59999 59001 -2 - 999 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65908.peg.908 CDS gi|480984019|gb|AREP01000010.1| 60596 60093 -2 - 504 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.65908.peg.909 CDS gi|480984019|gb|AREP01000010.1| 61730 60753 -2 - 978 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.65908.peg.910 CDS gi|480984019|gb|AREP01000010.1| 62389 62054 -1 - 336 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.65908.peg.911 CDS gi|480984019|gb|AREP01000010.1| 62588 62451 -2 - 138 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.65908.peg.912 CDS gi|480984019|gb|AREP01000010.1| 63428 65155 2 + 1728 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65908.peg.913 CDS gi|480984019|gb|AREP01000010.1| 65755 66951 1 + 1197 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65908.peg.914 CDS gi|480984019|gb|AREP01000010.1| 67034 68215 2 + 1182 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65908.peg.915 CDS gi|480984019|gb|AREP01000010.1| 68212 68841 1 + 630 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65908.peg.916 CDS gi|480984019|gb|AREP01000010.1| 68971 71079 1 + 2109 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65908.peg.917 CDS gi|480984019|gb|AREP01000010.1| 71297 71926 2 + 630 Probable glycosyltransferase - none -
fig|6666666.65908.peg.918 CDS gi|480984019|gb|AREP01000010.1| 71923 72882 1 + 960 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.65908.peg.919 CDS gi|480984019|gb|AREP01000010.1| 72872 73759 2 + 888 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.65908.peg.920 CDS gi|480984019|gb|AREP01000010.1| 73762 75357 1 + 1596 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.65908.peg.921 CDS gi|480984019|gb|AREP01000010.1| 75350 75664 2 + 315 C50 carotenoid epsilon cyclase - none -
fig|6666666.65908.peg.922 CDS gi|480984019|gb|AREP01000010.1| 75661 75954 1 + 294 C50 carotenoid epsilon cyclase - none -
fig|6666666.65908.peg.923 CDS gi|480984019|gb|AREP01000010.1| 75958 76812 1 + 855 Lycopene elongase (EC 2.5.1.-) - none -
fig|6666666.65908.peg.924 CDS gi|480984019|gb|AREP01000010.1| 76900 77457 1 + 558 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65908.peg.925 CDS gi|480984019|gb|AREP01000010.1| 77904 77467 -3 - 438 hypothetical protein - none -
fig|6666666.65908.peg.926 CDS gi|480984019|gb|AREP01000010.1| 78632 78282 -2 - 351 hypothetical protein - none -
fig|6666666.65908.peg.927 CDS gi|480984019|gb|AREP01000010.1| 78846 80018 3 + 1173 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.65908.peg.928 CDS gi|480984019|gb|AREP01000010.1| 80329 80051 -1 - 279 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.65908.peg.929 CDS gi|480984019|gb|AREP01000010.1| 81544 81290 -1 - 255 Prevent host death protein, Phd antitoxin # A Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.65908.peg.930 CDS gi|480984019|gb|AREP01000010.1| 81679 84240 1 + 2562 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65908.peg.931 CDS gi|480984019|gb|AREP01000010.1| 84243 84614 3 + 372 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65908.peg.932 CDS gi|480984019|gb|AREP01000010.1| 87045 84997 -3 - 2049 membrane protein - none -
fig|6666666.65908.peg.933 CDS gi|480984019|gb|AREP01000010.1| 87708 87046 -3 - 663 hypothetical protein - none -
fig|6666666.65908.peg.934 CDS gi|480984019|gb|AREP01000010.1| 87808 88398 1 + 591 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.935 CDS gi|480984019|gb|AREP01000010.1| 88929 89378 3 + 450 Heat shock protein Hsp20 - none -
fig|6666666.65908.peg.936 CDS gi|480984019|gb|AREP01000010.1| 89747 90934 2 + 1188 hypothetical protein - none -
fig|6666666.65908.peg.937 CDS gi|480984019|gb|AREP01000010.1| 91172 91474 2 + 303 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65908.peg.938 CDS gi|480984019|gb|AREP01000010.1| 91501 91812 1 + 312 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65908.peg.939 CDS gi|480984019|gb|AREP01000010.1| 91866 93578 3 + 1713 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65908.peg.940 CDS gi|480984019|gb|AREP01000010.1| 93721 94197 1 + 477 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65908.peg.941 CDS gi|480984019|gb|AREP01000010.1| 94178 94897 2 + 720 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65908.peg.942 CDS gi|480984019|gb|AREP01000010.1| 94931 95545 2 + 615 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65908.peg.943 CDS gi|480984019|gb|AREP01000010.1| 95547 96425 3 + 879 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65908.peg.944 CDS gi|480984019|gb|AREP01000010.1| 96799 96446 -1 - 354 putative mercury resistance operon regulator MerR - none -
fig|6666666.65908.peg.945 CDS gi|480984019|gb|AREP01000010.1| 97762 97043 -1 - 720 Putative membrane protein - none -
fig|6666666.65908.peg.946 CDS gi|480984019|gb|AREP01000010.1| 98061 99047 3 + 987 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65908.peg.947 CDS gi|480984019|gb|AREP01000010.1| 99122 99006 -2 - 117 hypothetical protein - none -
fig|6666666.65908.peg.948 CDS gi|480984019|gb|AREP01000010.1| 99138 101384 3 + 2247 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.65908.peg.949 CDS gi|480984019|gb|AREP01000010.1| 101600 102970 2 + 1371 hypothetical protein - none -
fig|6666666.65908.peg.950 CDS gi|480984019|gb|AREP01000010.1| 103094 102933 -2 - 162 Mobile element protein - none -
fig|6666666.65908.peg.951 CDS gi|480984022|gb|AREP01000009.1| 818 258 -2 - 561 Catechol 1,2-dioxygenase 1 (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.65908.peg.952 CDS gi|480984022|gb|AREP01000009.1| 1693 845 -1 - 849 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.953 CDS gi|480984022|gb|AREP01000009.1| 3058 2249 -1 - 810 hypothetical protein - none -
fig|6666666.65908.peg.954 CDS gi|480984022|gb|AREP01000009.1| 3180 4523 3 + 1344 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65908.peg.955 CDS gi|480984022|gb|AREP01000009.1| 4692 4997 3 + 306 hypothetical protein - none -
fig|6666666.65908.peg.956 CDS gi|480984022|gb|AREP01000009.1| 4984 6114 1 + 1131 hypothetical protein - none -
fig|6666666.65908.peg.957 CDS gi|480984022|gb|AREP01000009.1| 6114 6347 3 + 234 hypothetical protein - none -
fig|6666666.65908.peg.958 CDS gi|480984022|gb|AREP01000009.1| 7204 6344 -1 - 861 FIG00545792: hypothetical protein - none -
fig|6666666.65908.peg.959 CDS gi|480984022|gb|AREP01000009.1| 7325 9229 2 + 1905 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65908.peg.960 CDS gi|480984022|gb|AREP01000009.1| 9261 9914 3 + 654 hypothetical membrane protein - none -
fig|6666666.65908.peg.961 CDS gi|480984022|gb|AREP01000009.1| 9932 11014 2 + 1083 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65908.peg.962 CDS gi|480984022|gb|AREP01000009.1| 11018 11512 2 + 495 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.65908.peg.963 CDS gi|480984022|gb|AREP01000009.1| 11502 12245 3 + 744 SAM-dependent methyltransferases - none -
fig|6666666.65908.peg.964 CDS gi|480984022|gb|AREP01000009.1| 12251 12901 2 + 651 putative transport protein - none -
fig|6666666.65908.peg.965 CDS gi|480984022|gb|AREP01000009.1| 12898 13845 1 + 948 putative transport protein - none -
fig|6666666.65908.peg.966 CDS gi|480984022|gb|AREP01000009.1| 13866 14366 3 + 501 hypothetical protein - none -
fig|6666666.65908.peg.967 CDS gi|480984022|gb|AREP01000009.1| 14366 15022 2 + 657 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.65908.peg.968 CDS gi|480984022|gb|AREP01000009.1| 15019 15492 1 + 474 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65908.peg.969 CDS gi|480984022|gb|AREP01000009.1| 15489 16541 3 + 1053 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65908.peg.970 CDS gi|480984022|gb|AREP01000009.1| 16577 17011 2 + 435 FIG00543939: hypothetical protein - none -
fig|6666666.65908.peg.971 CDS gi|480984022|gb|AREP01000009.1| 17169 17468 3 + 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65908.peg.972 CDS gi|480984022|gb|AREP01000009.1| 17482 19101 1 + 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65908.peg.973 CDS gi|480984022|gb|AREP01000009.1| 19498 19175 -1 - 324 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.65908.peg.974 CDS gi|480984022|gb|AREP01000009.1| 19831 20403 1 + 573 putative RNA polymerase sigma factor - none -
fig|6666666.65908.peg.975 CDS gi|480984022|gb|AREP01000009.1| 20407 21267 1 + 861 FIG00544252: hypothetical protein - none -
fig|6666666.65908.peg.976 CDS gi|480984022|gb|AREP01000009.1| 21636 21268 -3 - 369 FIG00544572: hypothetical protein - none -
fig|6666666.65908.peg.977 CDS gi|480984022|gb|AREP01000009.1| 21795 23318 3 + 1524 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65908.peg.978 CDS gi|480984022|gb|AREP01000009.1| 23376 24524 3 + 1149 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65908.peg.979 CDS gi|480984022|gb|AREP01000009.1| 24577 26133 1 + 1557 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65908.peg.980 CDS gi|480984022|gb|AREP01000009.1| 27259 26150 -1 - 1110 hypothetical protein - none -
fig|6666666.65908.peg.981 CDS gi|480984022|gb|AREP01000009.1| 27410 28546 2 + 1137 FIG00545356: hypothetical protein - none -
fig|6666666.65908.peg.982 CDS gi|480984022|gb|AREP01000009.1| 28566 29198 3 + 633 two-component system response regulator - none -
fig|6666666.65908.peg.983 CDS gi|480984022|gb|AREP01000009.1| 29617 29204 -1 - 414 hypothetical membrane protein - none -
fig|6666666.65908.peg.984 CDS gi|480984022|gb|AREP01000009.1| 29720 30400 2 + 681 FIG00544716: hypothetical protein - none -
fig|6666666.65908.peg.985 CDS gi|480984022|gb|AREP01000009.1| 30401 31942 2 + 1542 DNA polymerase-like protein PA0670 - none -
fig|6666666.65908.peg.986 CDS gi|480984022|gb|AREP01000009.1| 32366 31947 -2 - 420 No significant database matches - none -
fig|6666666.65908.peg.987 CDS gi|480984022|gb|AREP01000009.1| 32624 33550 2 + 927 FIG00546271: hypothetical protein - none -
fig|6666666.65908.peg.988 CDS gi|480984022|gb|AREP01000009.1| 33596 35074 2 + 1479 Sulfate permease Cysteine Biosynthesis
fig|6666666.65908.peg.989 CDS gi|480984022|gb|AREP01000009.1| 35832 35071 -3 - 762 hypothetical protein - none -
fig|6666666.65908.peg.990 CDS gi|480984022|gb|AREP01000009.1| 36523 35843 -1 - 681 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.991 CDS gi|480984022|gb|AREP01000009.1| 37539 36520 -3 - 1020 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.992 CDS gi|480984022|gb|AREP01000009.1| 38417 37539 -2 - 879 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.993 CDS gi|480984022|gb|AREP01000009.1| 38764 41655 1 + 2892 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65908.peg.994 CDS gi|480984022|gb|AREP01000009.1| 43326 42466 -3 - 861 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.65908.peg.995 CDS gi|480984022|gb|AREP01000009.1| 44051 43323 -2 - 729 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.65908.peg.996 CDS gi|480984022|gb|AREP01000009.1| 44971 44048 -1 - 924 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65908.peg.997 CDS gi|480984022|gb|AREP01000009.1| 45075 45737 3 + 663 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.65908.peg.998 CDS gi|480984022|gb|AREP01000009.1| 45743 46192 2 + 450 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65908.peg.999 CDS gi|480984022|gb|AREP01000009.1| 46189 47529 1 + 1341 transmembrane protein, distant homology with ydbT - none -
fig|6666666.65908.peg.1000 CDS gi|480984022|gb|AREP01000009.1| 48836 47556 -2 - 1281 hypothetical protein - none -
fig|6666666.65908.peg.1001 CDS gi|480984022|gb|AREP01000009.1| 49464 48994 -3 - 471 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65908.peg.1002 CDS gi|480984022|gb|AREP01000009.1| 49489 50346 1 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65908.peg.1003 CDS gi|480984022|gb|AREP01000009.1| 50330 50647 2 + 318 hypothetical protein - none -
fig|6666666.65908.peg.1004 CDS gi|480984022|gb|AREP01000009.1| 51786 50644 -3 - 1143 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65908.peg.1005 CDS gi|480984022|gb|AREP01000009.1| 53124 51802 -3 - 1323 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65908.peg.1006 CDS gi|480984022|gb|AREP01000009.1| 53844 53248 -3 - 597 hypothetical protein - none -
fig|6666666.65908.peg.1007 CDS gi|480984022|gb|AREP01000009.1| 54429 53863 -3 - 567 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1008 CDS gi|480984022|gb|AREP01000009.1| 54726 54460 -3 - 267 hypothetical protein - none -
fig|6666666.65908.peg.1009 CDS gi|480984022|gb|AREP01000009.1| 55041 54763 -3 - 279 hypothetical protein - none -
fig|6666666.65908.peg.1010 CDS gi|480984022|gb|AREP01000009.1| 55371 55868 3 + 498 hypothetical protein - none -
fig|6666666.65908.peg.1011 CDS gi|480984022|gb|AREP01000009.1| 55871 57364 2 + 1494 COG2041: Sulfite oxidase and related enzymes - none -
fig|6666666.65908.peg.1012 CDS gi|480984022|gb|AREP01000009.1| 57375 58070 3 + 696 hypothetical protein - none -
fig|6666666.65908.peg.1013 CDS gi|480984022|gb|AREP01000009.1| 59386 58067 -1 - 1320 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65908.peg.1014 CDS gi|480984022|gb|AREP01000009.1| 59458 60354 1 + 897 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65908.peg.1015 CDS gi|480984022|gb|AREP01000009.1| 62613 60439 -3 - 2175 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.65908.peg.1016 CDS gi|480984022|gb|AREP01000009.1| 62769 63665 3 + 897 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65908.peg.1017 CDS gi|480984022|gb|AREP01000009.1| 63671 64465 2 + 795 Putative inner membrane protein - none -
fig|6666666.65908.peg.1018 CDS gi|480984022|gb|AREP01000009.1| 64505 65515 2 + 1011 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65908.peg.1019 CDS gi|480984022|gb|AREP01000009.1| 65797 65582 -1 - 216 hypothetical protein - none -
fig|6666666.65908.peg.1020 CDS gi|480984022|gb|AREP01000009.1| 65964 67061 3 + 1098 putative membrane protein - none -
fig|6666666.65908.peg.1021 CDS gi|480984022|gb|AREP01000009.1| 68274 67036 -3 - 1239 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.1022 CDS gi|480984022|gb|AREP01000009.1| 68423 69133 2 + 711 hypothetical protein - none -
fig|6666666.65908.peg.1023 CDS gi|480984022|gb|AREP01000009.1| 70368 69130 -3 - 1239 FIG026501: hypothetical protein - none -
fig|6666666.65908.peg.1024 CDS gi|480984022|gb|AREP01000009.1| 71259 70390 -3 - 870 FIG00544549: hypothetical protein - none -
fig|6666666.65908.peg.1025 CDS gi|480984022|gb|AREP01000009.1| 71543 71256 -2 - 288 hypothetical protein - none -
fig|6666666.65908.peg.1026 CDS gi|480984022|gb|AREP01000009.1| 71624 72247 2 + 624 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.1027 CDS gi|480984022|gb|AREP01000009.1| 72373 72702 1 + 330 predicted transcriptional regulator - none -
fig|6666666.65908.peg.1028 CDS gi|480984022|gb|AREP01000009.1| 72801 73985 3 + 1185 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65908.peg.1029 CDS gi|480984022|gb|AREP01000009.1| 74036 75451 2 + 1416 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65908.peg.1030 CDS gi|480984022|gb|AREP01000009.1| 76778 75459 -2 - 1320 Transcriptional regulator, XRE family - none -
fig|6666666.65908.peg.1031 CDS gi|480984022|gb|AREP01000009.1| 76911 78422 3 + 1512 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65908.peg.1032 CDS gi|480984022|gb|AREP01000009.1| 78422 79345 2 + 924 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65908.peg.1033 CDS gi|480984022|gb|AREP01000009.1| 79364 80512 2 + 1149 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65908.peg.1034 CDS gi|480984022|gb|AREP01000009.1| 84429 80743 -3 - 3687 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65908.peg.1035 CDS gi|480984022|gb|AREP01000009.1| 84683 88096 2 + 3414 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65908.peg.1036 CDS gi|480984022|gb|AREP01000009.1| 88665 88162 -3 - 504 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65908.peg.1037 CDS gi|480984022|gb|AREP01000009.1| 90462 88687 -3 - 1776 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65908.peg.1038 CDS gi|480984022|gb|AREP01000009.1| 90658 90506 -1 - 153 hypothetical protein - none -
fig|6666666.65908.peg.1039 CDS gi|480984022|gb|AREP01000009.1| 91517 90612 -2 - 906 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65908.peg.1040 CDS gi|480984022|gb|AREP01000009.1| 91881 91651 -3 - 231 hypothetical protein - none -
fig|6666666.65908.peg.1041 CDS gi|480984022|gb|AREP01000009.1| 91894 92880 1 + 987 FIG00548218: hypothetical protein - none -
fig|6666666.65908.peg.1042 CDS gi|480984022|gb|AREP01000009.1| 93281 92883 -2 - 399 FIG00547406: hypothetical protein - none -
fig|6666666.65908.peg.1043 CDS gi|480984022|gb|AREP01000009.1| 94485 93373 -3 - 1113 hypothetical protein - none -
fig|6666666.65908.peg.1044 CDS gi|480984022|gb|AREP01000009.1| 95094 94492 -3 - 603 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65908.peg.1045 CDS gi|480984022|gb|AREP01000009.1| 95380 95171 -1 - 210 hypothetical protein - none -
fig|6666666.65908.peg.1046 CDS gi|480984022|gb|AREP01000009.1| 96872 95400 -2 - 1473 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65908.peg.1047 CDS gi|480984022|gb|AREP01000009.1| 97345 96980 -1 - 366 hypothetical protein - none -
fig|6666666.65908.peg.1048 CDS gi|480984022|gb|AREP01000009.1| 97446 98807 3 + 1362 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65908.peg.1049 CDS gi|480984022|gb|AREP01000009.1| 98869 99075 1 + 207 hypothetical protein - none -
fig|6666666.65908.peg.1050 CDS gi|480984022|gb|AREP01000009.1| 99718 99329 -1 - 390 hypothetical protein - none -
fig|6666666.65908.peg.1051 CDS gi|480984022|gb|AREP01000009.1| 101738 100641 -2 - 1098 FIG005429: hypothetical protein - none -
fig|6666666.65908.peg.1052 CDS gi|480984022|gb|AREP01000009.1| 105084 101722 -3 - 3363 FIG007317: hypothetical protein - none -
fig|6666666.65908.peg.1053 CDS gi|480984022|gb|AREP01000009.1| 105686 105081 -2 - 606 FIG039767: hypothetical protein - none -
fig|6666666.65908.peg.1054 CDS gi|480984022|gb|AREP01000009.1| 106890 105679 -3 - 1212 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.65908.peg.1055 CDS gi|480984022|gb|AREP01000009.1| 107087 106890 -2 - 198 FIG149030: hypothetical protein - none -
fig|6666666.65908.peg.1056 CDS gi|480984022|gb|AREP01000009.1| 107511 108917 3 + 1407 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65908.peg.1057 CDS gi|480984022|gb|AREP01000009.1| 109295 109101 -2 - 195 hypothetical protein - none -
fig|6666666.65908.peg.1058 CDS gi|480984025|gb|AREP01000008.1| 1457 222 -2 - 1236 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.65908.peg.1059 CDS gi|480984025|gb|AREP01000008.1| 1602 2045 3 + 444 Transcriptional regulator, AsnC family - none -
fig|6666666.65908.peg.1060 CDS gi|480984025|gb|AREP01000008.1| 3209 2022 -2 - 1188 ATP-dependent DNA helicase - none -
fig|6666666.65908.peg.1061 CDS gi|480984025|gb|AREP01000008.1| 3315 3440 3 + 126 hypothetical protein - none -
fig|6666666.65908.peg.1062 CDS gi|480984025|gb|AREP01000008.1| 3782 3492 -2 - 291 ATP-dependent DNA helicase - none -
fig|6666666.65908.peg.1063 CDS gi|480984025|gb|AREP01000008.1| 4514 3843 -2 - 672 hypothetical protein - none -
fig|6666666.65908.peg.1064 CDS gi|480984025|gb|AREP01000008.1| 5201 4518 -2 - 684 hypothetical protein - none -
fig|6666666.65908.peg.1065 CDS gi|480984025|gb|AREP01000008.1| 5416 5249 -1 - 168 hypothetical protein - none -
fig|6666666.65908.peg.1066 CDS gi|480984025|gb|AREP01000008.1| 6089 5505 -2 - 585 hypothetical protein - none -
fig|6666666.65908.peg.1067 CDS gi|480984025|gb|AREP01000008.1| 6776 6399 -2 - 378 hypothetical protein - none -
fig|6666666.65908.peg.1068 CDS gi|480984025|gb|AREP01000008.1| 7989 6823 -3 - 1167 YeeC-like protein CBSS-316273.3.peg.2378
fig|6666666.65908.peg.1069 CDS gi|480984025|gb|AREP01000008.1| 9981 7990 -3 - 1992 FIG006126: DNA helicase, restriction/modification system component YeeB CBSS-316273.3.peg.2378
fig|6666666.65908.peg.1070 CDS gi|480984025|gb|AREP01000008.1| 12680 9981 -2 - 2700 FIG045374: Type II restriction enzyme, methylase subunit YeeA CBSS-316273.3.peg.2378
fig|6666666.65908.peg.1071 CDS gi|480984025|gb|AREP01000008.1| 14054 12738 -2 - 1317 Predicted D-mannonate epimerase - none -
fig|6666666.65908.peg.1072 CDS gi|480984025|gb|AREP01000008.1| 14096 14218 2 + 123 hypothetical protein - none -
fig|6666666.65908.peg.1073 CDS gi|480984025|gb|AREP01000008.1| 14421 16100 3 + 1680 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65908.peg.1074 CDS gi|480984025|gb|AREP01000008.1| 16100 17767 2 + 1668 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65908.peg.1075 CDS gi|480984025|gb|AREP01000008.1| 18383 17781 -2 - 603 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1076 CDS gi|480984025|gb|AREP01000008.1| 18457 19638 1 + 1182 Neopullulanase (EC 3.2.1.135) Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.1077 CDS gi|480984025|gb|AREP01000008.1| 20149 19643 -1 - 507 hypothetical protein - none -
fig|6666666.65908.peg.1078 CDS gi|480984025|gb|AREP01000008.1| 21665 20169 -2 - 1497 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.1079 CDS gi|480984025|gb|AREP01000008.1| 21723 22226 3 + 504 hypothetical protein - none -
fig|6666666.65908.peg.1080 CDS gi|480984025|gb|AREP01000008.1| 23735 22359 -2 - 1377 FIG016551: Putative peptidase - none -
fig|6666666.65908.peg.1081 CDS gi|480984025|gb|AREP01000008.1| 23779 24087 1 + 309 hypothetical protein - none -
fig|6666666.65908.peg.1082 CDS gi|480984025|gb|AREP01000008.1| 24880 24143 -1 - 738 hypothetical protein - none -
fig|6666666.65908.peg.1083 CDS gi|480984025|gb|AREP01000008.1| 25339 25073 -1 - 267 hypothetical protein - none -
fig|6666666.65908.peg.1084 CDS gi|480984025|gb|AREP01000008.1| 26209 25871 -1 - 339 hypothetical protein - none -
fig|6666666.65908.peg.1085 CDS gi|480984025|gb|AREP01000008.1| 27383 26517 -2 - 867 Conserved protein - none -
fig|6666666.65908.peg.1086 CDS gi|480984025|gb|AREP01000008.1| 28368 27631 -3 - 738 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) - none -
fig|6666666.65908.peg.1087 CDS gi|480984025|gb|AREP01000008.1| 29308 28349 -1 - 960 Putative lipase - none -
fig|6666666.65908.peg.1088 CDS gi|480984025|gb|AREP01000008.1| 30917 29328 -2 - 1590 Choline-sulfatase (EC 3.1.6.6) Choline and Betaine Uptake and Betaine Biosynthesis;
Sulfatases and sulfatase modifying factor 1
fig|6666666.65908.peg.1089 CDS gi|480984025|gb|AREP01000008.1| 30912 31025 3 + 114 hypothetical protein - none -
fig|6666666.65908.peg.1090 CDS gi|480984025|gb|AREP01000008.1| 31136 31981 2 + 846 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65908.peg.1091 CDS gi|480984025|gb|AREP01000008.1| 33198 32356 -3 - 843 transmembrane transport protein - none -
fig|6666666.65908.peg.1092 CDS gi|480984025|gb|AREP01000008.1| 33356 34282 2 + 927 Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1) Sulfatases and sulfatase modifying factor 1
fig|6666666.65908.peg.1093 CDS gi|480984025|gb|AREP01000008.1| 34322 35734 2 + 1413 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.65908.peg.1094 CDS gi|480984025|gb|AREP01000008.1| 35734 36684 1 + 951 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65908.peg.1095 CDS gi|480984025|gb|AREP01000008.1| 36714 37295 3 + 582 FIG00545581: hypothetical protein - none -
fig|6666666.65908.peg.1096 CDS gi|480984025|gb|AREP01000008.1| 38381 37299 -2 - 1083 FIG00544490: hypothetical protein - none -
fig|6666666.65908.peg.1097 CDS gi|480984025|gb|AREP01000008.1| 39700 38450 -1 - 1251 permease of the major facilitator superfamily - none -
fig|6666666.65908.peg.1098 CDS gi|480984025|gb|AREP01000008.1| 40557 39754 -3 - 804 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65908.peg.1099 CDS gi|480984025|gb|AREP01000008.1| 40645 42339 1 + 1695 FIG00544558: hypothetical protein - none -
fig|6666666.65908.peg.1100 CDS gi|480984025|gb|AREP01000008.1| 43369 42362 -1 - 1008 FIG00545643: hypothetical protein - none -
fig|6666666.65908.peg.1101 CDS gi|480984025|gb|AREP01000008.1| 43397 44146 2 + 750 FIG00545045: hypothetical protein - none -
fig|6666666.65908.peg.1102 CDS gi|480984025|gb|AREP01000008.1| 44207 44971 2 + 765 conserved hypothetical protein - none -
fig|6666666.65908.peg.1103 CDS gi|480984025|gb|AREP01000008.1| 44964 45698 3 + 735 Putative deoxyribonuclease similar to YcfH, type 4 YcfH
fig|6666666.65908.peg.1104 CDS gi|480984025|gb|AREP01000008.1| 48514 46250 -1 - 2265 ATP-dependent helicase HrpB - none -
fig|6666666.65908.peg.1105 CDS gi|480984025|gb|AREP01000008.1| 49191 49874 3 + 684 Short chain dehydrogenase - none -
fig|6666666.65908.peg.1106 CDS gi|480984025|gb|AREP01000008.1| 49899 50534 3 + 636 L-lysine permease - none -
fig|6666666.65908.peg.1107 CDS gi|480984025|gb|AREP01000008.1| 50558 50839 2 + 282 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65908.peg.1108 CDS gi|480984025|gb|AREP01000008.1| 50844 51686 3 + 843 lactoylglutathione lyase-like protein - none -
fig|6666666.65908.peg.1109 CDS gi|480984025|gb|AREP01000008.1| 51784 52785 1 + 1002 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.1110 CDS gi|480984025|gb|AREP01000008.1| 52860 53765 3 + 906 hypothetical protein - none -
fig|6666666.65908.peg.1111 CDS gi|480984025|gb|AREP01000008.1| 54717 53782 -3 - 936 FIG00544069: hypothetical protein - none -
fig|6666666.65908.peg.1112 CDS gi|480984025|gb|AREP01000008.1| 54802 55428 1 + 627 No significant database matches - none -
fig|6666666.65908.peg.1113 CDS gi|480984025|gb|AREP01000008.1| 57362 55431 -2 - 1932 putative endopeptidase - none -
fig|6666666.65908.peg.1114 CDS gi|480984025|gb|AREP01000008.1| 57392 58048 2 + 657 hypothetical protein - none -
fig|6666666.65908.peg.1115 CDS gi|480984025|gb|AREP01000008.1| 58079 58972 2 + 894 putative integral membrane protein - none -
fig|6666666.65908.peg.1116 CDS gi|480984025|gb|AREP01000008.1| 62259 58975 -3 - 3285 putative arabinosyltransferase - none -
fig|6666666.65908.peg.1117 CDS gi|480984025|gb|AREP01000008.1| 64353 62443 -3 - 1911 putative membrane protein - none -
fig|6666666.65908.peg.1118 CDS gi|480984025|gb|AREP01000008.1| 65278 64511 -1 - 768 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.65908.peg.1119 CDS gi|480984025|gb|AREP01000008.1| 66707 65292 -2 - 1416 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65908.peg.1120 CDS gi|480984025|gb|AREP01000008.1| 67089 66853 -3 - 237 FIG00543901: hypothetical protein - none -
fig|6666666.65908.peg.1121 CDS gi|480984025|gb|AREP01000008.1| 67125 67598 3 + 474 Putative membrane protein - none -
fig|6666666.65908.peg.1122 CDS gi|480984025|gb|AREP01000008.1| 67595 68008 2 + 414 hypothetical protein - none -
fig|6666666.65908.peg.1123 CDS gi|480984025|gb|AREP01000008.1| 68029 68964 1 + 936 FIG00545361: hypothetical protein - none -
fig|6666666.65908.peg.1124 CDS gi|480984025|gb|AREP01000008.1| 69014 69499 2 + 486 FIG00544442: hypothetical protein - none -
fig|6666666.65908.peg.1125 CDS gi|480984025|gb|AREP01000008.1| 69511 70002 1 + 492 hypothetical protein - none -
fig|6666666.65908.peg.1126 CDS gi|480984025|gb|AREP01000008.1| 70923 70012 -3 - 912 Putative glycosyl transferase - none -
fig|6666666.65908.peg.1127 CDS gi|480984025|gb|AREP01000008.1| 72193 71387 -1 - 807 O-antigen export system, ATP-binding protein - none -
fig|6666666.65908.peg.1128 CDS gi|480984025|gb|AREP01000008.1| 73091 72204 -2 - 888 O-antigen export system permease protein RfbD - none -
fig|6666666.65908.peg.1129 CDS gi|480984025|gb|AREP01000008.1| 73447 73115 -1 - 333 hypothetical protein - none -
fig|6666666.65908.peg.1130 CDS gi|480984025|gb|AREP01000008.1| 73810 75054 1 + 1245 selenocysteine lyase - none -
fig|6666666.65908.peg.1131 CDS gi|480984025|gb|AREP01000008.1| 76040 75051 -2 - 990 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65908.peg.1132 CDS gi|480984025|gb|AREP01000008.1| 76998 76402 -3 - 597 FIG00548436: hypothetical protein - none -
fig|6666666.65908.peg.1133 CDS gi|480984025|gb|AREP01000008.1| 77449 77249 -1 - 201 hypothetical protein - none -
fig|6666666.65908.peg.1134 CDS gi|480984025|gb|AREP01000008.1| 78049 77534 -1 - 516 Transporter - none -
fig|6666666.65908.peg.1135 CDS gi|480984025|gb|AREP01000008.1| 79266 78199 -3 - 1068 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65908.peg.1136 CDS gi|480984025|gb|AREP01000008.1| 79726 79259 -1 - 468 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65908.peg.1137 CDS gi|480984025|gb|AREP01000008.1| 80192 79716 -2 - 477 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65908.peg.1138 CDS gi|480984025|gb|AREP01000008.1| 81429 80203 -3 - 1227 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65908.peg.1139 CDS gi|480984025|gb|AREP01000008.1| 81489 81758 3 + 270 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65908.peg.1140 CDS gi|480984025|gb|AREP01000008.1| 82785 81763 -3 - 1023 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65908.peg.1141 CDS gi|480984025|gb|AREP01000008.1| 83361 84854 3 + 1494 Transporter, putative - none -
fig|6666666.65908.peg.1142 CDS gi|480984025|gb|AREP01000008.1| 84855 86783 3 + 1929 two-component sensor histidine kinase - none -
fig|6666666.65908.peg.1143 CDS gi|480984025|gb|AREP01000008.1| 86784 87260 3 + 477 Putative chemotaxis protein CheY - none -
fig|6666666.65908.peg.1144 CDS gi|480984025|gb|AREP01000008.1| 87336 88694 3 + 1359 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65908.peg.1145 CDS gi|480984029|gb|AREP01000007.1| 24 236 3 + 213 Mobile element protein - none -
fig|6666666.65908.peg.1146 CDS gi|480984029|gb|AREP01000007.1| 280 1149 1 + 870 Mobile element protein - none -
fig|6666666.65908.peg.1147 CDS gi|480984029|gb|AREP01000007.1| 1251 2018 3 + 768 Mobile element protein - none -
fig|6666666.65908.peg.1148 CDS gi|480984029|gb|AREP01000007.1| 2245 3219 1 + 975 Mobile element protein - none -
fig|6666666.65908.peg.1149 CDS gi|480984029|gb|AREP01000007.1| 3216 3962 3 + 747 Mobile element protein - none -
fig|6666666.65908.peg.1150 CDS gi|480984029|gb|AREP01000007.1| 5511 6977 3 + 1467 hypothetical protein - none -
fig|6666666.65908.peg.1151 CDS gi|480984029|gb|AREP01000007.1| 7992 8264 3 + 273 hypothetical protein - none -
fig|6666666.65908.peg.1152 CDS gi|480984029|gb|AREP01000007.1| 8467 9516 1 + 1050 hypothetical protein - none -
fig|6666666.65908.peg.1153 CDS gi|480984029|gb|AREP01000007.1| 9513 11279 3 + 1767 No significant database matches - none -
fig|6666666.65908.peg.1154 CDS gi|480984029|gb|AREP01000007.1| 11646 12881 3 + 1236 FIG00544673: hypothetical protein - none -
fig|6666666.65908.peg.1155 CDS gi|480984029|gb|AREP01000007.1| 12957 14048 3 + 1092 MloA - none -
fig|6666666.65908.peg.1156 CDS gi|480984029|gb|AREP01000007.1| 14862 15011 3 + 150 hypothetical protein - none -
fig|6666666.65908.peg.1157 CDS gi|480984029|gb|AREP01000007.1| 15460 15053 -1 - 408 possible excisionase - none -
fig|6666666.65908.peg.1158 CDS gi|480984029|gb|AREP01000007.1| 16217 15543 -2 - 675 Circadian phase modifier - none -
fig|6666666.65908.peg.1159 CDS gi|480984029|gb|AREP01000007.1| 17151 16264 -3 - 888 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.65908.peg.1160 CDS gi|480984029|gb|AREP01000007.1| 18562 17162 -1 - 1401 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65908.peg.1161 CDS gi|480984029|gb|AREP01000007.1| 19809 18559 -3 - 1251 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65908.peg.1162 CDS gi|480984029|gb|AREP01000007.1| 19897 20517 1 + 621 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1163 CDS gi|480984029|gb|AREP01000007.1| 20531 22447 2 + 1917 Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) - none -
fig|6666666.65908.peg.1164 CDS gi|480984029|gb|AREP01000007.1| 23378 22485 -2 - 894 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65908.peg.1165 CDS gi|480984029|gb|AREP01000007.1| 24389 23406 -2 - 984 Glutathione S-transferase, omega (EC 2.5.1.18) CBSS-89187.3.peg.2957;
Glutathione: Non-redox reactions
fig|6666666.65908.peg.1166 CDS gi|480984029|gb|AREP01000007.1| 25390 24401 -1 - 990 Glutathione S-transferase, omega (EC 2.5.1.18) CBSS-89187.3.peg.2957;
Glutathione: Non-redox reactions
fig|6666666.65908.peg.1167 CDS gi|480984029|gb|AREP01000007.1| 26723 25416 -2 - 1308 General substrate transporter - none -
fig|6666666.65908.peg.1168 CDS gi|480984029|gb|AREP01000007.1| 27772 26825 -1 - 948 Ureidoglycolate dehydrogenase (EC 1.1.1.154) - none -
fig|6666666.65908.peg.1169 CDS gi|480984029|gb|AREP01000007.1| 27919 30051 1 + 2133 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.65908.peg.1170 CDS gi|480984029|gb|AREP01000007.1| 30499 31761 1 + 1263 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65908.peg.1171 CDS gi|480984029|gb|AREP01000007.1| 31809 32954 3 + 1146 Membrane protein - none -
fig|6666666.65908.peg.1172 CDS gi|480984029|gb|AREP01000007.1| 33431 32967 -2 - 465 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.65908.peg.1173 CDS gi|480984029|gb|AREP01000007.1| 33954 33499 -3 - 456 hypothetical protein - none -
fig|6666666.65908.peg.1174 CDS gi|480984029|gb|AREP01000007.1| 33945 34472 3 + 528 hypothetical protein - none -
fig|6666666.65908.peg.1175 CDS gi|480984029|gb|AREP01000007.1| 34618 34947 1 + 330 Hypothetical protein YaeJ with similarity to translation release factor Translation termination factors bacterial
fig|6666666.65908.peg.1176 CDS gi|480984029|gb|AREP01000007.1| 35447 38296 2 + 2850 CRISPR-associated helicase Cas3, protein CRISPRs
fig|6666666.65908.peg.1177 CDS gi|480984029|gb|AREP01000007.1| 38376 40055 3 + 1680 CRISPR-associated protein, Cse1 family CRISPRs
fig|6666666.65908.peg.1178 CDS gi|480984029|gb|AREP01000007.1| 40856 41842 2 + 987 CRISPR-associated protein, CT1975 family - none -
fig|6666666.65908.peg.1179 CDS gi|480984029|gb|AREP01000007.1| 43962 44159 3 + 198 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.65908.peg.1180 CDS gi|480984029|gb|AREP01000007.1| 45541 45690 1 + 150 hypothetical protein - none -
fig|6666666.65908.peg.1181 CDS gi|480984032|gb|AREP01000006.1| 4146 706 -3 - 3441 hypothetical protein - none -
fig|6666666.65908.peg.1182 CDS gi|480984032|gb|AREP01000006.1| 5872 5000 -1 - 873 Sortase A, LPXTG specific Sortase
fig|6666666.65908.peg.1183 CDS gi|480984032|gb|AREP01000006.1| 7461 5989 -3 - 1473 Fimbrial subunit type 2 precursor - none -
fig|6666666.65908.peg.1184 CDS gi|480984032|gb|AREP01000006.1| 9270 7816 -3 - 1455 Drug resistance transporter EmrB/QacA subfamily - none -
fig|6666666.65908.peg.1185 CDS gi|480984032|gb|AREP01000006.1| 10802 9342 -2 - 1461 putative transport protein - none -
fig|6666666.65908.peg.1186 CDS gi|480984032|gb|AREP01000006.1| 12316 10955 -1 - 1362 FIG00545970: hypothetical protein - none -
fig|6666666.65908.peg.1187 CDS gi|480984032|gb|AREP01000006.1| 12407 13507 2 + 1101 FIG00547297: hypothetical protein - none -
fig|6666666.65908.peg.1188 CDS gi|480984032|gb|AREP01000006.1| 13572 14648 3 + 1077 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.65908.peg.1189 CDS gi|480984032|gb|AREP01000006.1| 14715 15869 3 + 1155 hypothetical protein - none -
fig|6666666.65908.peg.1190 CDS gi|480984032|gb|AREP01000006.1| 16642 15866 -1 - 777 FIG00545709: hypothetical protein - none -
fig|6666666.65908.peg.1191 CDS gi|480984032|gb|AREP01000006.1| 16724 16981 2 + 258 hypothetical protein - none -
fig|6666666.65908.peg.1192 CDS gi|480984032|gb|AREP01000006.1| 16978 18147 1 + 1170 hypothetical protein - none -
fig|6666666.65908.peg.1193 CDS gi|480984032|gb|AREP01000006.1| 18209 19978 2 + 1770 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.1194 CDS gi|480984032|gb|AREP01000006.1| 20107 20841 1 + 735 hypothetical protein - none -
fig|6666666.65908.peg.1195 CDS gi|480984032|gb|AREP01000006.1| 21326 20919 -2 - 408 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65908.peg.1196 CDS gi|480984032|gb|AREP01000006.1| 22538 21348 -2 - 1191 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65908.peg.1197 CDS gi|480984032|gb|AREP01000006.1| 23337 22684 -3 - 654 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65908.peg.1198 CDS gi|480984032|gb|AREP01000006.1| 25249 23393 -1 - 1857 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65908.peg.1199 CDS gi|480984032|gb|AREP01000006.1| 26430 25381 -3 - 1050 hypothetical protein - none -
fig|6666666.65908.peg.1200 CDS gi|480984032|gb|AREP01000006.1| 26490 27884 3 + 1395 FIG00544912: hypothetical protein - none -
fig|6666666.65908.peg.1201 CDS gi|480984032|gb|AREP01000006.1| 27938 28471 2 + 534 ThiJ/PfpI family protein - none -
fig|6666666.65908.peg.1202 CDS gi|480984032|gb|AREP01000006.1| 28590 29771 3 + 1182 hypothetical protein - none -
fig|6666666.65908.peg.1203 CDS gi|480984032|gb|AREP01000006.1| 30691 29768 -1 - 924 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65908.peg.1204 CDS gi|480984032|gb|AREP01000006.1| 31427 30738 -2 - 690 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.65908.peg.1205 CDS gi|480984032|gb|AREP01000006.1| 32635 31424 -1 - 1212 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65908.peg.1206 CDS gi|480984032|gb|AREP01000006.1| 33552 32635 -3 - 918 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.65908.peg.1207 CDS gi|480984032|gb|AREP01000006.1| 34520 33534 -2 - 987 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation;
Inorganic Sulfur Assimilation
fig|6666666.65908.peg.1208 CDS gi|480984032|gb|AREP01000006.1| 36184 34517 -1 - 1668 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.65908.peg.1209 CDS gi|480984032|gb|AREP01000006.1| 36459 37829 3 + 1371 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.65908.peg.1210 CDS gi|480984032|gb|AREP01000006.1| 37905 39611 3 + 1707 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65908.peg.1211 CDS gi|480984032|gb|AREP01000006.1| 39608 41542 2 + 1935 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.65908.peg.1212 CDS gi|480984032|gb|AREP01000006.1| 41643 42896 3 + 1254 hypothetical protein - none -
fig|6666666.65908.peg.1213 CDS gi|480984032|gb|AREP01000006.1| 42967 45417 1 + 2451 Fe-S oxidoreductase - none -
fig|6666666.65908.peg.1214 CDS gi|480984032|gb|AREP01000006.1| 46153 45575 -1 - 579 hypothetical protein - none -
fig|6666666.65908.peg.1215 CDS gi|480984032|gb|AREP01000006.1| 46682 46551 -2 - 132 hypothetical protein - none -
fig|6666666.65908.peg.1216 CDS gi|480984032|gb|AREP01000006.1| 47213 47037 -2 - 177 hypothetical protein - none -
fig|6666666.65908.peg.1217 CDS gi|480984032|gb|AREP01000006.1| 47297 51181 2 + 3885 hypothetical protein - none -
fig|6666666.65908.peg.1218 CDS gi|480984032|gb|AREP01000006.1| 51405 51262 -3 - 144 hypothetical protein - none -
fig|6666666.65908.peg.1219 CDS gi|480984032|gb|AREP01000006.1| 53188 52016 -1 - 1173 ATPase - none -
fig|6666666.65908.peg.1220 CDS gi|480984032|gb|AREP01000006.1| 54749 53493 -2 - 1257 hypothetical protein - none -
fig|6666666.65908.peg.1221 CDS gi|480984032|gb|AREP01000006.1| 54902 57235 2 + 2334 Fe-S oxidoreductase - none -
fig|6666666.65908.peg.1222 CDS gi|480984032|gb|AREP01000006.1| 57488 57342 -2 - 147 hypothetical protein - none -
fig|6666666.65908.peg.1223 CDS gi|480984032|gb|AREP01000006.1| 58190 58678 2 + 489 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.65908.peg.1224 CDS gi|480984032|gb|AREP01000006.1| 58671 59261 3 + 591 hypothetical protein - none -
fig|6666666.65908.peg.1225 CDS gi|480984032|gb|AREP01000006.1| 59258 59749 2 + 492 hypothetical protein - none -
fig|6666666.65908.peg.1226 CDS gi|480984032|gb|AREP01000006.1| 60026 61162 2 + 1137 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65908.peg.1227 CDS gi|480984032|gb|AREP01000006.1| 61164 62384 3 + 1221 FIG00547263: hypothetical protein - none -
fig|6666666.65908.peg.1228 CDS gi|480984032|gb|AREP01000006.1| 62731 62381 -1 - 351 hypothetical protein - none -
fig|6666666.65908.peg.1229 CDS gi|480984032|gb|AREP01000006.1| 64088 62763 -2 - 1326 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65908.peg.1230 CDS gi|480984032|gb|AREP01000006.1| 64701 64132 -3 - 570 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) - none -
fig|6666666.65908.peg.1231 CDS gi|480984032|gb|AREP01000006.1| 65917 66165 1 + 249 hypothetical protein - none -
fig|6666666.65908.peg.1232 CDS gi|480984032|gb|AREP01000006.1| 66173 66895 2 + 723 hypothetical protein - none -
fig|6666666.65908.peg.1233 CDS gi|480984032|gb|AREP01000006.1| 67274 67032 -2 - 243 hypothetical protein - none -
fig|6666666.65908.peg.1234 CDS gi|480984032|gb|AREP01000006.1| 68970 67609 -3 - 1362 hypothetical protein - none -
fig|6666666.65908.peg.1235 CDS gi|480984032|gb|AREP01000006.1| 69348 70175 3 + 828 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65908.peg.1236 CDS gi|480984032|gb|AREP01000006.1| 71971 70172 -1 - 1800 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65908.peg.1237 CDS gi|480984032|gb|AREP01000006.1| 72038 73333 2 + 1296 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65908.peg.1238 CDS gi|480984032|gb|AREP01000006.1| 74959 73334 -1 - 1626 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65908.peg.1239 CDS gi|480984032|gb|AREP01000006.1| 76221 75067 -3 - 1155 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.65908.peg.1240 CDS gi|480984032|gb|AREP01000006.1| 76366 76848 1 + 483 hypothetical protein - none -
fig|6666666.65908.peg.1241 CDS gi|480984032|gb|AREP01000006.1| 76870 77067 1 + 198 FIG00543976: hypothetical protein - none -
fig|6666666.65908.peg.1242 CDS gi|480984032|gb|AREP01000006.1| 77074 80112 1 + 3039 Conserved putative integral membrane protein - none -
fig|6666666.65908.peg.1243 CDS gi|480984032|gb|AREP01000006.1| 81147 82394 3 + 1248 Putative integral membrane protein - none -
fig|6666666.65908.peg.1244 CDS gi|480984032|gb|AREP01000006.1| 84841 83762 -1 - 1080 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65908.peg.1245 CDS gi|480984032|gb|AREP01000006.1| 84852 85628 3 + 777 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65908.peg.1246 CDS gi|480984032|gb|AREP01000006.1| 85829 85632 -2 - 198 hypothetical protein - none -
fig|6666666.65908.peg.1247 CDS gi|480984032|gb|AREP01000006.1| 87891 86059 -3 - 1833 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65908.peg.1248 CDS gi|480984032|gb|AREP01000006.1| 88432 89217 1 + 786 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.65908.peg.1249 CDS gi|480984032|gb|AREP01000006.1| 89220 89897 3 + 678 FIG00546304: hypothetical protein - none -
fig|6666666.65908.peg.1250 CDS gi|480984032|gb|AREP01000006.1| 89909 92200 2 + 2292 putative integral membrane protein - none -
fig|6666666.65908.peg.1251 CDS gi|480984032|gb|AREP01000006.1| 92242 93216 1 + 975 conserved hypothetical protein 374 - none -
fig|6666666.65908.peg.1252 CDS gi|480984032|gb|AREP01000006.1| 93351 93713 3 + 363 FIG00544939: hypothetical protein - none -
fig|6666666.65908.peg.1253 CDS gi|480984032|gb|AREP01000006.1| 95440 93887 -1 - 1554 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65908.peg.1254 CDS gi|480984032|gb|AREP01000006.1| 100212 95440 -3 - 4773 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65908.peg.1255 CDS gi|480984032|gb|AREP01000006.1| 102177 100339 -3 - 1839 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.1256 CDS gi|480984032|gb|AREP01000006.1| 103185 102259 -3 - 927 hypothetical protein Rv3802c - none -
fig|6666666.65908.peg.1257 CDS gi|480984032|gb|AREP01000006.1| 103677 103201 -3 - 477 hypothetical protein - none -
fig|6666666.65908.peg.1258 CDS gi|480984032|gb|AREP01000006.1| 105546 103681 -3 - 1866 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65908.peg.1259 CDS gi|480984032|gb|AREP01000006.1| 106910 105894 -2 - 1017 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65908.peg.1260 CDS gi|480984032|gb|AREP01000006.1| 108763 106976 -1 - 1788 hypothetical protein Rv3805c - none -
fig|6666666.65908.peg.1261 CDS gi|480984032|gb|AREP01000006.1| 109771 108779 -1 - 993 putative membrane protein - none -
fig|6666666.65908.peg.1262 CDS gi|480984032|gb|AREP01000006.1| 110274 109768 -3 - 507 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65908.peg.1263 CDS gi|480984032|gb|AREP01000006.1| 112204 110261 -1 - 1944 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65908.peg.1264 CDS gi|480984032|gb|AREP01000006.1| 112972 112376 -1 - 597 hypothetical protein - none -
fig|6666666.65908.peg.1265 CDS gi|480984032|gb|AREP01000006.1| 113194 113036 -1 - 159 hypothetical protein - none -
fig|6666666.65908.peg.1266 CDS gi|480984032|gb|AREP01000006.1| 114000 113413 -3 - 588 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Transcription repair cluster
fig|6666666.65908.peg.1267 CDS gi|480984032|gb|AREP01000006.1| 114291 115469 3 + 1179 hypothetical protein - none -
fig|6666666.65908.peg.1268 CDS gi|480984032|gb|AREP01000006.1| 116656 115466 -1 - 1191 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65908.peg.1269 CDS gi|480984032|gb|AREP01000006.1| 116823 118763 3 + 1941 FIG00544841: hypothetical protein - none -
fig|6666666.65908.peg.1270 CDS gi|480984032|gb|AREP01000006.1| 120235 118760 -1 - 1476 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.1271 CDS gi|480984032|gb|AREP01000006.1| 121075 120260 -1 - 816 Cof family hydrolase - none -
fig|6666666.65908.peg.1272 CDS gi|480984032|gb|AREP01000006.1| 121945 121079 -1 - 867 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.1273 CDS gi|480984032|gb|AREP01000006.1| 123205 121946 -1 - 1260 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65908.peg.1274 CDS gi|480984032|gb|AREP01000006.1| 123319 124071 1 + 753 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.65908.peg.1275 CDS gi|480984032|gb|AREP01000006.1| 124081 125157 1 + 1077 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.1276 CDS gi|480984032|gb|AREP01000006.1| 125154 125501 3 + 348 FIG00544953: hypothetical protein - none -
fig|6666666.65908.peg.1277 CDS gi|480984032|gb|AREP01000006.1| 126094 125498 -1 - 597 putative phosphoglycerate mutase - none -
fig|6666666.65908.peg.1278 CDS gi|480984032|gb|AREP01000006.1| 127018 126095 -1 - 924 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65908.peg.1279 CDS gi|480984032|gb|AREP01000006.1| 127043 127741 2 + 699 Putative conserved integral membrane protein - none -
fig|6666666.65908.peg.1280 CDS gi|480984032|gb|AREP01000006.1| 127852 129006 1 + 1155 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65908.peg.1281 CDS gi|480984032|gb|AREP01000006.1| 129147 128986 -3 - 162 hypothetical protein - none -
fig|6666666.65908.peg.1282 CDS gi|480984032|gb|AREP01000006.1| 130448 129315 -2 - 1134 SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3) - none -
fig|6666666.65908.peg.1283 CDS gi|480984032|gb|AREP01000006.1| 131828 130488 -2 - 1341 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65908.peg.1284 CDS gi|480984032|gb|AREP01000006.1| 132845 131916 -2 - 930 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65908.peg.1285 CDS gi|480984032|gb|AREP01000006.1| 133798 132845 -1 - 954 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65908.peg.1286 CDS gi|480984032|gb|AREP01000006.1| 134829 133915 -3 - 915 FIG00996178: hypothetical protein - none -
fig|6666666.65908.peg.1287 CDS gi|480984032|gb|AREP01000006.1| 135577 134864 -1 - 714 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65908.peg.1288 CDS gi|480984032|gb|AREP01000006.1| 137451 135577 -3 - 1875 Pyruvate kinase family protein - none -
fig|6666666.65908.peg.1289 CDS gi|480984032|gb|AREP01000006.1| 138486 137542 -3 - 945 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.65908.peg.1290 CDS gi|480984032|gb|AREP01000006.1| 138685 140532 1 + 1848 Predicted membrane protein (DUF2319) - none -
fig|6666666.65908.peg.1291 CDS gi|480984032|gb|AREP01000006.1| 141856 140498 -1 - 1359 Alkaline phosphatase( EC:3.1.3.1 ) - none -
fig|6666666.65908.peg.1292 CDS gi|480984032|gb|AREP01000006.1| 142861 142220 -1 - 642 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65908.peg.1293 CDS gi|480984032|gb|AREP01000006.1| 143041 143643 1 + 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65908.peg.1294 CDS gi|480984032|gb|AREP01000006.1| 144802 143933 -1 - 870 putative transcription regulator - none -
fig|6666666.65908.peg.1295 CDS gi|480984032|gb|AREP01000006.1| 144868 146046 1 + 1179 putative transport protein - none -
fig|6666666.65908.peg.1296 CDS gi|480984032|gb|AREP01000006.1| 147601 146060 -1 - 1542 FIG00544355: hypothetical protein - none -
fig|6666666.65908.peg.1297 CDS gi|480984032|gb|AREP01000006.1| 147682 148317 1 + 636 FIG071084: hypothetical protein - none -
fig|6666666.65908.peg.1298 CDS gi|480984032|gb|AREP01000006.1| 148987 148349 -1 - 639 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.65908.peg.1299 CDS gi|480984032|gb|AREP01000006.1| 150249 148984 -3 - 1266 Hemoglobin-dependent two component system, sensory histidine kinase HrrS - none -
fig|6666666.65908.peg.1300 CDS gi|480984032|gb|AREP01000006.1| 150248 150856 2 + 609 hypothetical protein - none -
fig|6666666.65908.peg.1301 CDS gi|480984032|gb|AREP01000006.1| 151013 150861 -2 - 153 FIG060545: short hypothetical protein - none -
fig|6666666.65908.peg.1302 CDS gi|480984032|gb|AREP01000006.1| 151802 151014 -2 - 789 FIG054872: Sortase-like protein - none -
fig|6666666.65908.peg.1303 CDS gi|480984032|gb|AREP01000006.1| 151880 153007 2 + 1128 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.65908.peg.1304 CDS gi|480984032|gb|AREP01000006.1| 153606 152995 -3 - 612 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1305 CDS gi|480984032|gb|AREP01000006.1| 153753 154214 3 + 462 hypothetical protein - none -
fig|6666666.65908.peg.1306 CDS gi|480984032|gb|AREP01000006.1| 154936 154241 -1 - 696 hypothetical protein - none -
fig|6666666.65908.peg.1307 CDS gi|480984032|gb|AREP01000006.1| 155248 155940 1 + 693 hypothetical protein - none -
fig|6666666.65908.peg.1308 CDS gi|480984032|gb|AREP01000006.1| 156564 157538 3 + 975 hypothetical protein - none -
fig|6666666.65908.peg.1309 CDS gi|480984032|gb|AREP01000006.1| 159747 158587 -3 - 1161 hypothetical protein - none -
fig|6666666.65908.peg.1310 CDS gi|480984032|gb|AREP01000006.1| 160266 159790 -3 - 477 No significant database matches - none -
fig|6666666.65908.peg.1311 CDS gi|480984032|gb|AREP01000006.1| 160417 160289 -1 - 129 hypothetical protein - none -
fig|6666666.65908.peg.1312 CDS gi|480984032|gb|AREP01000006.1| 162116 161853 -2 - 264 transglycosylase associated protein - none -
fig|6666666.65908.peg.1313 CDS gi|480984032|gb|AREP01000006.1| 163240 162347 -1 - 894 Universal stress protein family - none -
fig|6666666.65908.peg.1314 CDS gi|480984032|gb|AREP01000006.1| 163523 163326 -2 - 198 hypothetical protein - none -
fig|6666666.65908.peg.1315 CDS gi|480984032|gb|AREP01000006.1| 163603 164457 1 + 855 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65908.peg.1316 CDS gi|480984036|gb|AREP01000005.1| 22 234 1 + 213 Mobile element protein - none -
fig|6666666.65908.peg.1317 CDS gi|480984036|gb|AREP01000005.1| 555 1580 3 + 1026 FIG00546389: hypothetical protein - none -
fig|6666666.65908.peg.1318 CDS gi|480984036|gb|AREP01000005.1| 2507 1593 -2 - 915 Auxin Efflux Carrier - none -
fig|6666666.65908.peg.1319 CDS gi|480984036|gb|AREP01000005.1| 2826 3587 3 + 762 Transcriptional regulator, GntR family - none -
fig|6666666.65908.peg.1320 CDS gi|480984036|gb|AREP01000005.1| 3622 5124 1 + 1503 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.65908.peg.1321 CDS gi|480984036|gb|AREP01000005.1| 5121 6080 3 + 960 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65908.peg.1322 CDS gi|480984036|gb|AREP01000005.1| 6077 6889 2 + 813 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65908.peg.1323 CDS gi|480984036|gb|AREP01000005.1| 6886 8265 1 + 1380 Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein - none -
fig|6666666.65908.peg.1324 CDS gi|480984036|gb|AREP01000005.1| 8935 8399 -1 - 537 2@1-5@1 RNA ligase RNA processing orphans
fig|6666666.65908.peg.1325 CDS gi|480984036|gb|AREP01000005.1| 9387 8932 -3 - 456 hypothetical protein - none -
fig|6666666.65908.peg.1326 CDS gi|480984036|gb|AREP01000005.1| 10782 9517 -3 - 1266 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.65908.peg.1327 CDS gi|480984036|gb|AREP01000005.1| 10812 11534 3 + 723 Aldose 1-epimerase - none -
fig|6666666.65908.peg.1328 CDS gi|480984036|gb|AREP01000005.1| 11649 13253 3 + 1605 putative integral membrane protein - none -
fig|6666666.65908.peg.1329 CDS gi|480984036|gb|AREP01000005.1| 13884 13219 -3 - 666 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - none -
fig|6666666.65908.peg.1330 CDS gi|480984036|gb|AREP01000005.1| 13958 15931 2 + 1974 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65908.peg.1331 CDS gi|480984036|gb|AREP01000005.1| 15979 16713 1 + 735 Transcriptional regulator - none -
fig|6666666.65908.peg.1332 CDS gi|480984036|gb|AREP01000005.1| 16764 17459 3 + 696 hypothetical protein - none -
fig|6666666.65908.peg.1333 CDS gi|480984036|gb|AREP01000005.1| 19329 17473 -3 - 1857 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65908.peg.1334 CDS gi|480984036|gb|AREP01000005.1| 19568 20116 2 + 549 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65908.peg.1335 CDS gi|480984036|gb|AREP01000005.1| 20311 20574 1 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.65908.peg.1336 CDS gi|480984036|gb|AREP01000005.1| 21429 20782 -3 - 648 Threonine efflux protein - none -
fig|6666666.65908.peg.1337 CDS gi|480984036|gb|AREP01000005.1| 21812 21426 -2 - 387 ankyrin repeat containing protein - none -
fig|6666666.65908.peg.1338 CDS gi|480984036|gb|AREP01000005.1| 22758 21826 -3 - 933 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65908.peg.1339 CDS gi|480984036|gb|AREP01000005.1| 24153 22783 -3 - 1371 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.65908.peg.1340 CDS gi|480984036|gb|AREP01000005.1| 25128 24430 -3 - 699 FIG00545717: hypothetical protein - none -
fig|6666666.65908.peg.1341 CDS gi|480984036|gb|AREP01000005.1| 26028 25213 -3 - 816 Hypothetical protein DUF194, DegV family - none -
fig|6666666.65908.peg.1342 CDS gi|480984036|gb|AREP01000005.1| 26698 26030 -1 - 669 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65908.peg.1343 CDS gi|480984036|gb|AREP01000005.1| 27177 26701 -3 - 477 Iojap protein - none -
fig|6666666.65908.peg.1344 CDS gi|480984036|gb|AREP01000005.1| 27867 27274 -3 - 594 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65908.peg.1345 CDS gi|480984036|gb|AREP01000005.1| 28363 27968 -1 - 396 hypothetical protein - none -
fig|6666666.65908.peg.1346 CDS gi|480984036|gb|AREP01000005.1| 29733 28444 -3 - 1290 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65908.peg.1347 CDS gi|480984036|gb|AREP01000005.1| 29825 32629 2 + 2805 ATP-dependent nuclease, subunit B - none -
fig|6666666.65908.peg.1348 CDS gi|480984036|gb|AREP01000005.1| 32629 35973 1 + 3345 hypothetical protein - none -
fig|6666666.65908.peg.1349 CDS gi|480984036|gb|AREP01000005.1| 36878 35970 -2 - 909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65908.peg.1350 CDS gi|480984036|gb|AREP01000005.1| 38017 36896 -1 - 1122 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.65908.peg.1351 CDS gi|480984036|gb|AREP01000005.1| 39561 38041 -3 - 1521 COG0536: GTP-binding protein Obg - none -
fig|6666666.65908.peg.1352 CDS gi|480984036|gb|AREP01000005.1| 39971 39693 -2 - 279 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65908.peg.1353 CDS gi|480984036|gb|AREP01000005.1| 40308 40003 -3 - 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65908.peg.1354 CDS gi|480984036|gb|AREP01000005.1| 43530 40480 -3 - 3051 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.65908.peg.1355 CDS gi|480984036|gb|AREP01000005.1| 44337 43765 -3 - 573 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1356 CDS gi|480984036|gb|AREP01000005.1| 44612 44938 2 + 327 hypothetical protein - none -
fig|6666666.65908.peg.1357 CDS gi|480984036|gb|AREP01000005.1| 45422 45012 -2 - 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.65908.peg.1358 CDS gi|480984036|gb|AREP01000005.1| 45793 45485 -1 - 309 hypothetical protein - none -
fig|6666666.65908.peg.1359 CDS gi|480984036|gb|AREP01000005.1| 46598 45804 -2 - 795 Ribosomal protein S6 glutaminyl transferase - none -
fig|6666666.65908.peg.1360 CDS gi|480984036|gb|AREP01000005.1| 47439 46591 -3 - 849 Ribosomal protein S6 glutaminyl transferase - none -
fig|6666666.65908.peg.1361 CDS gi|480984036|gb|AREP01000005.1| 47860 47444 -1 - 417 Putative membrane protein - none -
fig|6666666.65908.peg.1362 CDS gi|480984036|gb|AREP01000005.1| 49471 47861 -1 - 1611 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65908.peg.1363 CDS gi|480984036|gb|AREP01000005.1| 52228 49472 -1 - 2757 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65908.peg.1364 CDS gi|480984036|gb|AREP01000005.1| 53695 52241 -1 - 1455 Chaperone protein HscA Alanine biosynthesis;
Iron-sulfur cluster assembly;
Protein chaperones
fig|6666666.65908.peg.1365 CDS gi|480984036|gb|AREP01000005.1| 54727 53738 -1 - 990 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65908.peg.1366 CDS gi|480984036|gb|AREP01000005.1| 55077 55868 3 + 792 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1367 CDS gi|480984036|gb|AREP01000005.1| 57098 55887 -2 - 1212 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65908.peg.1368 CDS gi|480984036|gb|AREP01000005.1| 57410 58636 2 + 1227 Benzoate transport protein Benzoate degradation
fig|6666666.65908.peg.1369 CDS gi|480984036|gb|AREP01000005.1| 58786 58613 -1 - 174 hypothetical protein - none -
fig|6666666.65908.peg.1370 CDS gi|480984036|gb|AREP01000005.1| 58808 60901 2 + 2094 regulatory protein, LuxR - none -
fig|6666666.65908.peg.1371 CDS gi|480984036|gb|AREP01000005.1| 61056 62390 3 + 1335 putative transport protein - none -
fig|6666666.65908.peg.1372 CDS gi|480984036|gb|AREP01000005.1| 62604 62368 -3 - 237 hypothetical protein - none -
fig|6666666.65908.peg.1373 CDS gi|480984036|gb|AREP01000005.1| 63752 62631 -2 - 1122 Muconate cycloisomerase (EC 5.5.1.1) Catechol branch of beta-ketoadipate pathway;
Muconate lactonizing enzyme family
fig|6666666.65908.peg.1374 CDS gi|480984036|gb|AREP01000005.1| 64769 63906 -2 - 864 Catechol 1,2-dioxygenase (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.65908.peg.1375 CDS gi|480984036|gb|AREP01000005.1| 64821 65045 3 + 225 hypothetical protein - none -
fig|6666666.65908.peg.1376 CDS gi|480984036|gb|AREP01000005.1| 65349 66866 3 + 1518 Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65908.peg.1377 CDS gi|480984036|gb|AREP01000005.1| 66928 67422 1 + 495 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.65908.peg.1378 CDS gi|480984036|gb|AREP01000005.1| 67539 69143 3 + 1605 benzoate dioxygenase, ferredoxin reductase component - none -
fig|6666666.65908.peg.1379 CDS gi|480984036|gb|AREP01000005.1| 69143 69982 2 + 840 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) Benzoate degradation
fig|6666666.65908.peg.1380 CDS gi|480984036|gb|AREP01000005.1| 70031 72619 2 + 2589 putative transcriptional regulator - none -
fig|6666666.65908.peg.1381 CDS gi|480984036|gb|AREP01000005.1| 72938 72648 -2 - 291 Muconolactone isomerase (EC 5.3.3.4) Catechol branch of beta-ketoadipate pathway
fig|6666666.65908.peg.1382 CDS gi|480984036|gb|AREP01000005.1| 73591 72965 -1 - 627 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.65908.peg.1383 CDS gi|480984036|gb|AREP01000005.1| 74355 73612 -3 - 744 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway
fig|6666666.65908.peg.1384 CDS gi|480984036|gb|AREP01000005.1| 74643 75278 3 + 636 Pca regulon regulatory protein PcaR - none -
fig|6666666.65908.peg.1385 CDS gi|480984036|gb|AREP01000005.1| 75275 76495 2 + 1221 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Serine-glyoxylate cycle
fig|6666666.65908.peg.1386 CDS gi|480984036|gb|AREP01000005.1| 76501 77265 1 + 765 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway
fig|6666666.65908.peg.1387 CDS gi|480984036|gb|AREP01000005.1| 78811 77339 -1 - 1473 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.65908.peg.1388 CDS gi|480984036|gb|AREP01000005.1| 79574 78954 -2 - 621 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65908.peg.1389 CDS gi|480984036|gb|AREP01000005.1| 80197 79598 -1 - 600 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65908.peg.1390 CDS gi|480984036|gb|AREP01000005.1| 81779 80394 -2 - 1386 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65908.peg.1391 CDS gi|480984036|gb|AREP01000005.1| 82502 83293 2 + 792 FIG00997919: hypothetical protein - none -
fig|6666666.65908.peg.1392 CDS gi|480984036|gb|AREP01000005.1| 84087 83290 -3 - 798 hypothetical protein - none -
fig|6666666.65908.peg.1393 CDS gi|480984036|gb|AREP01000005.1| 85040 84072 -2 - 969 hypothetical protein - none -
fig|6666666.65908.peg.1394 CDS gi|480984036|gb|AREP01000005.1| 86101 85037 -1 - 1065 FIG00549115: hypothetical protein - none -
fig|6666666.65908.peg.1395 CDS gi|480984036|gb|AREP01000005.1| 87120 86098 -3 - 1023 FIG00547591: hypothetical protein - none -
fig|6666666.65908.peg.1396 CDS gi|480984036|gb|AREP01000005.1| 87203 88060 2 + 858 FIG00549203: hypothetical protein - none -
fig|6666666.65908.peg.1397 CDS gi|480984036|gb|AREP01000005.1| 88060 90051 1 + 1992 hypothetical protein - none -
fig|6666666.65908.peg.1398 CDS gi|480984036|gb|AREP01000005.1| 90080 90904 2 + 825 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65908.peg.1399 CDS gi|480984036|gb|AREP01000005.1| 91445 90972 -2 - 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65908.peg.1400 CDS gi|480984036|gb|AREP01000005.1| 92784 91501 -3 - 1284 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65908.peg.1401 CDS gi|480984036|gb|AREP01000005.1| 93495 92869 -3 - 627 FIG00544229: hypothetical protein - none -
fig|6666666.65908.peg.1402 CDS gi|480984036|gb|AREP01000005.1| 93600 95999 3 + 2400 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65908.peg.1403 CDS gi|480984036|gb|AREP01000005.1| 96081 96536 3 + 456 hypothetical protein - none -
fig|6666666.65908.peg.1404 CDS gi|480984036|gb|AREP01000005.1| 96571 97962 1 + 1392 putative sensor kinase - none -
fig|6666666.65908.peg.1405 CDS gi|480984036|gb|AREP01000005.1| 97959 98615 3 + 657 two-component system, response regulator - none -
fig|6666666.65908.peg.1406 CDS gi|480984036|gb|AREP01000005.1| 99325 98612 -1 - 714 Transcriptional regulator, GntR family - none -
fig|6666666.65908.peg.1407 CDS gi|480984036|gb|AREP01000005.1| 100565 99423 -2 - 1143 Cystathionine gamma-lyase (EC 4.4.1.1) Cysteine Biosynthesis;
Glycine and Serine Utilization;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.1408 CDS gi|480984036|gb|AREP01000005.1| 100670 101653 2 + 984 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65908.peg.1409 CDS gi|480984036|gb|AREP01000005.1| 101673 102044 3 + 372 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65908.peg.1410 CDS gi|480984036|gb|AREP01000005.1| 103298 102051 -2 - 1248 hypothetical protein - none -
fig|6666666.65908.peg.1411 CDS gi|480984036|gb|AREP01000005.1| 104089 103469 -1 - 621 FIG00545013: hypothetical protein - none -
fig|6666666.65908.peg.1412 CDS gi|480984036|gb|AREP01000005.1| 104511 104086 -3 - 426 FIG00544139: hypothetical protein - none -
fig|6666666.65908.peg.1413 CDS gi|480984036|gb|AREP01000005.1| 106208 104538 -2 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.1414 CDS gi|480984036|gb|AREP01000005.1| 106856 106278 -2 - 579 Putative single-strand binding protein - none -
fig|6666666.65908.peg.1415 CDS gi|480984036|gb|AREP01000005.1| 109055 107001 -2 - 2055 Copper resistance protein D Copper homeostasis
fig|6666666.65908.peg.1416 CDS gi|480984036|gb|AREP01000005.1| 109156 110043 1 + 888 Transcriptional regulator - none -
fig|6666666.65908.peg.1417 CDS gi|480984036|gb|AREP01000005.1| 110353 110207 -1 - 147 hypothetical protein - none -
fig|6666666.65908.peg.1418 CDS gi|480984036|gb|AREP01000005.1| 110528 110662 2 + 135 hypothetical protein - none -
fig|6666666.65908.peg.1419 CDS gi|480984036|gb|AREP01000005.1| 111474 111644 3 + 171 hypothetical protein - none -
fig|6666666.65908.peg.1420 CDS gi|480984036|gb|AREP01000005.1| 111881 111747 -2 - 135 hypothetical protein - none -
fig|6666666.65908.peg.1421 CDS gi|480984036|gb|AREP01000005.1| 112012 112134 1 + 123 hypothetical protein - none -
fig|6666666.65908.peg.1422 CDS gi|480984036|gb|AREP01000005.1| 112395 113195 3 + 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.65908.peg.1423 CDS gi|480984036|gb|AREP01000005.1| 113746 113192 -1 - 555 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.65908.peg.1424 CDS gi|480984036|gb|AREP01000005.1| 115844 113730 -2 - 2115 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.65908.peg.1425 CDS gi|480984036|gb|AREP01000005.1| 116078 116722 2 + 645 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65908.peg.1426 CDS gi|480984036|gb|AREP01000005.1| 117836 116892 -2 - 945 oxygenase - none -
fig|6666666.65908.peg.1427 CDS gi|480984036|gb|AREP01000005.1| 119036 117837 -2 - 1200 putative lipoprotein - none -
fig|6666666.65908.peg.1428 CDS gi|480984036|gb|AREP01000005.1| 119914 119390 -1 - 525 hypothetical protein - none -
fig|6666666.65908.peg.1429 CDS gi|480984036|gb|AREP01000005.1| 120177 121256 3 + 1080 transcriptional regulator - none -
fig|6666666.65908.peg.1430 CDS gi|480984036|gb|AREP01000005.1| 121467 122738 3 + 1272 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.65908.peg.1431 CDS gi|480984036|gb|AREP01000005.1| 122735 124093 2 + 1359 D-mannonate oxidoreductase (EC 1.1.1.57) - none -
fig|6666666.65908.peg.1432 CDS gi|480984036|gb|AREP01000005.1| 124181 126349 2 + 2169 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.65908.peg.1433 CDS gi|480984036|gb|AREP01000005.1| 126525 127040 3 + 516 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.65908.peg.1434 CDS gi|480984036|gb|AREP01000005.1| 127075 127653 1 + 579 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.65908.peg.1435 CDS gi|480984036|gb|AREP01000005.1| 127929 127654 -3 - 276 hypothetical protein - none -
fig|6666666.65908.peg.1436 CDS gi|480984036|gb|AREP01000005.1| 128021 128497 2 + 477 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65908.peg.1437 CDS gi|480984036|gb|AREP01000005.1| 128497 129138 1 + 642 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1438 CDS gi|480984036|gb|AREP01000005.1| 129526 129146 -1 - 381 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65908.peg.1439 CDS gi|480984036|gb|AREP01000005.1| 138297 129526 -3 - 8772 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65908.peg.1440 CDS gi|480984036|gb|AREP01000005.1| 138549 140435 3 + 1887 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.65908.peg.1441 CDS gi|480984036|gb|AREP01000005.1| 140686 141129 1 + 444 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.65908.peg.1442 CDS gi|480984036|gb|AREP01000005.1| 141146 141508 2 + 363 FIG00543835: hypothetical protein - none -
fig|6666666.65908.peg.1443 CDS gi|480984036|gb|AREP01000005.1| 142117 141515 -1 - 603 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65908.peg.1444 CDS gi|480984036|gb|AREP01000005.1| 142842 142111 -3 - 732 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.65908.peg.1445 CDS gi|480984036|gb|AREP01000005.1| 143538 142861 -3 - 678 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.65908.peg.1446 CDS gi|480984036|gb|AREP01000005.1| 144479 143703 -2 - 777 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.1447 CDS gi|480984036|gb|AREP01000005.1| 145014 144541 -3 - 474 Transcriptional regulator, MarR family - none -
fig|6666666.65908.peg.1448 CDS gi|480984036|gb|AREP01000005.1| 145828 145193 -1 - 636 FIG00545125: hypothetical protein - none -
fig|6666666.65908.peg.1449 CDS gi|480984036|gb|AREP01000005.1| 146901 145912 -3 - 990 possible hydrolase - none -
fig|6666666.65908.peg.1450 CDS gi|480984036|gb|AREP01000005.1| 147401 146865 -2 - 537 Transcriptional regulatory protein - none -
fig|6666666.65908.peg.1451 CDS gi|480984036|gb|AREP01000005.1| 147715 147428 -1 - 288 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65908.peg.1452 CDS gi|480984036|gb|AREP01000005.1| 147860 148408 2 + 549 hypothetical protein - none -
fig|6666666.65908.peg.1453 CDS gi|480984036|gb|AREP01000005.1| 148445 149788 2 + 1344 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.65908.peg.1454 CDS gi|480984036|gb|AREP01000005.1| 149807 151795 2 + 1989 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65908.peg.1455 CDS gi|480984036|gb|AREP01000005.1| 152534 151785 -2 - 750 FIG00546117: hypothetical protein - none -
fig|6666666.65908.peg.1456 CDS gi|480984036|gb|AREP01000005.1| 153796 152534 -1 - 1263 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65908.peg.1457 CDS gi|480984036|gb|AREP01000005.1| 155653 153968 -1 - 1686 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65908.peg.1458 CDS gi|480984036|gb|AREP01000005.1| 157077 156082 -3 - 996 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65908.peg.1459 CDS gi|480984036|gb|AREP01000005.1| 157337 158047 2 + 711 Transcriptional regulator, GntR family - none -
fig|6666666.65908.peg.1460 CDS gi|480984036|gb|AREP01000005.1| 158214 159038 3 + 825 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.1461 CDS gi|480984036|gb|AREP01000005.1| 159043 160068 1 + 1026 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.1462 CDS gi|480984036|gb|AREP01000005.1| 160065 160739 3 + 675 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.1463 CDS gi|480984036|gb|AREP01000005.1| 162985 160820 -1 - 2166 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65908.peg.1464 CDS gi|480984036|gb|AREP01000005.1| 163592 163056 -2 - 537 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65908.peg.1465 CDS gi|480984036|gb|AREP01000005.1| 163975 163742 -1 - 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.65908.peg.1466 CDS gi|480984036|gb|AREP01000005.1| 164675 164553 -2 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65908.peg.1467 CDS gi|480984036|gb|AREP01000005.1| 166221 164833 -3 - 1389 FIG00544486: hypothetical protein - none -
fig|6666666.65908.peg.1468 CDS gi|480984036|gb|AREP01000005.1| 166250 167086 2 + 837 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.65908.peg.1469 CDS gi|480984036|gb|AREP01000005.1| 167847 167083 -3 - 765 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.65908.peg.1470 CDS gi|480984036|gb|AREP01000005.1| 168830 168099 -2 - 732 FIG00544592: hypothetical protein - none -
fig|6666666.65908.peg.1471 CDS gi|480984036|gb|AREP01000005.1| 169332 168889 -3 - 444 FIG00544597: hypothetical protein - none -
fig|6666666.65908.peg.1472 CDS gi|480984036|gb|AREP01000005.1| 171106 169448 -1 - 1659 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.65908.peg.1473 CDS gi|480984036|gb|AREP01000005.1| 171326 172744 2 + 1419 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.65908.peg.1474 CDS gi|480984036|gb|AREP01000005.1| 172755 173072 3 + 318 CrcB protein - none -
fig|6666666.65908.peg.1475 CDS gi|480984036|gb|AREP01000005.1| 173073 173429 3 + 357 CrcB protein - none -
fig|6666666.65908.peg.1476 CDS gi|480984036|gb|AREP01000005.1| 175969 173426 -1 - 2544 ABC-type transporter, permease component - none -
fig|6666666.65908.peg.1477 CDS gi|480984036|gb|AREP01000005.1| 176749 175982 -1 - 768 putative ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.1478 CDS gi|480984036|gb|AREP01000005.1| 177147 176995 -3 - 153 Mobile element protein - none -
fig|6666666.65908.peg.1479 CDS gi|480984039|gb|AREP01000004.1| 292 810 1 + 519 ABC transporter - none -
fig|6666666.65908.peg.1480 CDS gi|480984039|gb|AREP01000004.1| 837 2561 3 + 1725 ABC-type transport system ATPase component - none -
fig|6666666.65908.peg.1481 CDS gi|480984039|gb|AREP01000004.1| 2558 3568 2 + 1011 putative polyhydroxybutyrate depolymerase - none -
fig|6666666.65908.peg.1482 CDS gi|480984039|gb|AREP01000004.1| 3614 4591 2 + 978 Conserved protein with diacylglycerol kinase catalytic domain - none -
fig|6666666.65908.peg.1483 CDS gi|480984039|gb|AREP01000004.1| 4811 4596 -2 - 216 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.65908.peg.1484 CDS gi|480984039|gb|AREP01000004.1| 5371 4991 -1 - 381 hypothetical protein - none -
fig|6666666.65908.peg.1485 CDS gi|480984039|gb|AREP01000004.1| 6233 5850 -2 - 384 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.65908.peg.1486 CDS gi|480984039|gb|AREP01000004.1| 7398 6226 -3 - 1173 hydrolase of the alpha/beta superfamily - none -
fig|6666666.65908.peg.1487 CDS gi|480984039|gb|AREP01000004.1| 7525 9816 1 + 2292 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65908.peg.1488 CDS gi|480984039|gb|AREP01000004.1| 9962 10387 2 + 426 FIG00672531: hypothetical protein - none -
fig|6666666.65908.peg.1489 CDS gi|480984039|gb|AREP01000004.1| 10605 11279 3 + 675 FIG00545122: hypothetical protein - none -
fig|6666666.65908.peg.1490 CDS gi|480984039|gb|AREP01000004.1| 11312 11917 2 + 606 hypothetical protein - none -
fig|6666666.65908.peg.1491 CDS gi|480984039|gb|AREP01000004.1| 12039 12596 3 + 558 FIG00544641: hypothetical protein - none -
fig|6666666.65908.peg.1492 CDS gi|480984039|gb|AREP01000004.1| 14055 12682 -3 - 1374 Putative secreted protein - none -
fig|6666666.65908.peg.1493 CDS gi|480984039|gb|AREP01000004.1| 14947 14099 -1 - 849 FIG00545058: hypothetical protein - none -
fig|6666666.65908.peg.1494 CDS gi|480984039|gb|AREP01000004.1| 16001 14949 -2 - 1053 FIG00546228: hypothetical protein - none -
fig|6666666.65908.peg.1495 CDS gi|480984039|gb|AREP01000004.1| 17380 16001 -1 - 1380 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65908.peg.1496 CDS gi|480984039|gb|AREP01000004.1| 18746 17406 -2 - 1341 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65908.peg.1497 CDS gi|480984039|gb|AREP01000004.1| 20367 18907 -3 - 1461 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.65908.peg.1498 CDS gi|480984039|gb|AREP01000004.1| 20459 20899 2 + 441 ComA operon protein 2 - none -
fig|6666666.65908.peg.1499 CDS gi|480984039|gb|AREP01000004.1| 21250 20900 -1 - 351 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65908.peg.1500 CDS gi|480984039|gb|AREP01000004.1| 21972 21247 -3 - 726 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65908.peg.1501 CDS gi|480984039|gb|AREP01000004.1| 22038 22640 3 + 603 FIG00544791: hypothetical protein - none -
fig|6666666.65908.peg.1502 CDS gi|480984039|gb|AREP01000004.1| 23541 22651 -3 - 891 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.65908.peg.1503 CDS gi|480984039|gb|AREP01000004.1| 23820 23569 -3 - 252 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.65908.peg.1504 CDS gi|480984039|gb|AREP01000004.1| 25954 23858 -1 - 2097 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.65908.peg.1505 CDS gi|480984039|gb|AREP01000004.1| 27605 26199 -2 - 1407 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65908.peg.1506 CDS gi|480984039|gb|AREP01000004.1| 27783 29099 3 + 1317 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65908.peg.1507 CDS gi|480984039|gb|AREP01000004.1| 29987 29283 -2 - 705 Putative secreted protein - none -
fig|6666666.65908.peg.1508 CDS gi|480984039|gb|AREP01000004.1| 30157 29993 -1 - 165 hypothetical protein - none -
fig|6666666.65908.peg.1509 CDS gi|480984039|gb|AREP01000004.1| 30479 30826 2 + 348 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65908.peg.1510 CDS gi|480984039|gb|AREP01000004.1| 31903 30899 -1 - 1005 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65908.peg.1511 CDS gi|480984039|gb|AREP01000004.1| 33429 31957 -3 - 1473 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65908.peg.1512 CDS gi|480984039|gb|AREP01000004.1| 33999 33430 -3 - 570 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65908.peg.1513 CDS gi|480984039|gb|AREP01000004.1| 35227 34031 -1 - 1197 FIG00544398: hypothetical protein - none -
fig|6666666.65908.peg.1514 CDS gi|480984039|gb|AREP01000004.1| 35955 35236 -3 - 720 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65908.peg.1515 CDS gi|480984039|gb|AREP01000004.1| 36743 35952 -2 - 792 hypothetical protein - none -
fig|6666666.65908.peg.1516 CDS gi|480984039|gb|AREP01000004.1| 37846 36740 -1 - 1107 probable metallopeptidase - none -
fig|6666666.65908.peg.1517 CDS gi|480984039|gb|AREP01000004.1| 37898 38455 2 + 558 hypothetical protein - none -
fig|6666666.65908.peg.1518 CDS gi|480984039|gb|AREP01000004.1| 41142 38452 -3 - 2691 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65908.peg.1519 CDS gi|480984039|gb|AREP01000004.1| 42229 41261 -1 - 969 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65908.peg.1520 CDS gi|480984039|gb|AREP01000004.1| 42496 42239 -1 - 258 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65908.peg.1521 CDS gi|480984039|gb|AREP01000004.1| 43504 42551 -1 - 954 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65908.peg.1522 CDS gi|480984039|gb|AREP01000004.1| 44408 43494 -2 - 915 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65908.peg.1523 CDS gi|480984039|gb|AREP01000004.1| 45809 44415 -2 - 1395 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65908.peg.1524 CDS gi|480984039|gb|AREP01000004.1| 45998 45813 -2 - 186 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65908.peg.1525 CDS gi|480984039|gb|AREP01000004.1| 47539 46019 -1 - 1521 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65908.peg.1526 CDS gi|480984039|gb|AREP01000004.1| 49071 47560 -3 - 1512 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65908.peg.1527 CDS gi|480984039|gb|AREP01000004.1| 49927 49094 -1 - 834 RNA methyltransferase - none -
fig|6666666.65908.peg.1528 CDS gi|480984039|gb|AREP01000004.1| 51178 49961 -1 - 1218 aspartyl aminopeptidase - none -
fig|6666666.65908.peg.1529 CDS gi|480984039|gb|AREP01000004.1| 51191 52027 2 + 837 RecB family exonuclease - none -
fig|6666666.65908.peg.1530 CDS gi|480984039|gb|AREP01000004.1| 52160 53359 2 + 1200 hypothetical protein - none -
fig|6666666.65908.peg.1531 CDS gi|480984039|gb|AREP01000004.1| 54998 53343 -2 - 1656 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65908.peg.1532 CDS gi|480984039|gb|AREP01000004.1| 56313 55003 -3 - 1311 C4-dicarboxylate transporter DcuA - none -
fig|6666666.65908.peg.1533 CDS gi|480984039|gb|AREP01000004.1| 57929 56505 -2 - 1425 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65908.peg.1534 CDS gi|480984039|gb|AREP01000004.1| 58857 58012 -3 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65908.peg.1535 CDS gi|480984039|gb|AREP01000004.1| 59136 58873 -3 - 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65908.peg.1536 CDS gi|480984039|gb|AREP01000004.1| 59833 59147 -1 - 687 possible hydrolase - none -
fig|6666666.65908.peg.1537 CDS gi|480984039|gb|AREP01000004.1| 60212 59835 -2 - 378 FIG00543988: hypothetical protein - none -
fig|6666666.65908.peg.1538 CDS gi|480984039|gb|AREP01000004.1| 61442 60237 -2 - 1206 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65908.peg.1539 CDS gi|480984039|gb|AREP01000004.1| 62310 61453 -3 - 858 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65908.peg.1540 CDS gi|480984039|gb|AREP01000004.1| 62372 63202 2 + 831 putative oxidoreductase - none -
fig|6666666.65908.peg.1541 CDS gi|480984039|gb|AREP01000004.1| 63237 64250 3 + 1014 prolipoprotein LppL - none -
fig|6666666.65908.peg.1542 CDS gi|480984039|gb|AREP01000004.1| 64260 65360 3 + 1101 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.1543 CDS gi|480984039|gb|AREP01000004.1| 65717 65373 -2 - 345 FIG00543853: hypothetical protein - none -
fig|6666666.65908.peg.1544 CDS gi|480984039|gb|AREP01000004.1| 66272 65718 -2 - 555 Phospholipid-binding protein - none -
fig|6666666.65908.peg.1545 CDS gi|480984039|gb|AREP01000004.1| 67096 66671 -1 - 426 Mannose-6-phosphate isomerase - none -
fig|6666666.65908.peg.1546 CDS gi|480984039|gb|AREP01000004.1| 67185 67862 3 + 678 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.65908.peg.1547 CDS gi|480984039|gb|AREP01000004.1| 67873 68433 1 + 561 FIG00545282: hypothetical protein - none -
fig|6666666.65908.peg.1548 CDS gi|480984039|gb|AREP01000004.1| 69616 68402 -1 - 1215 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65908.peg.1549 CDS gi|480984039|gb|AREP01000004.1| 69897 69619 -3 - 279 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.65908.peg.1550 CDS gi|480984039|gb|AREP01000004.1| 70897 70058 -1 - 840 FIG00544636: hypothetical protein - none -
fig|6666666.65908.peg.1551 CDS gi|480984039|gb|AREP01000004.1| 70931 71677 2 + 747 FIG00546138: hypothetical protein - none -
fig|6666666.65908.peg.1552 CDS gi|480984039|gb|AREP01000004.1| 72705 71674 -3 - 1032 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1553 CDS gi|480984039|gb|AREP01000004.1| 74624 72750 -2 - 1875 cell wall-associated hydrolase - none -
fig|6666666.65908.peg.1554 CDS gi|480984039|gb|AREP01000004.1| 75545 75072 -2 - 474 hypothetical protein - none -
fig|6666666.65908.peg.1555 CDS gi|480984039|gb|AREP01000004.1| 75833 78610 2 + 2778 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65908.peg.1556 CDS gi|480984039|gb|AREP01000004.1| 78747 79322 3 + 576 Transcriptional regulator, TetR family - none -
fig|6666666.65908.peg.1557 CDS gi|480984039|gb|AREP01000004.1| 79346 80077 2 + 732 GMP synthase - none -
fig|6666666.65908.peg.1558 CDS gi|480984039|gb|AREP01000004.1| 80735 80061 -2 - 675 FIG00545571: hypothetical protein - none -
fig|6666666.65908.peg.1559 CDS gi|480984039|gb|AREP01000004.1| 80828 81118 2 + 291 ACT domain protein - none -
fig|6666666.65908.peg.1560 CDS gi|480984039|gb|AREP01000004.1| 81131 82495 2 + 1365 FIG00848225: hypothetical protein - none -
fig|6666666.65908.peg.1561 CDS gi|480984039|gb|AREP01000004.1| 82561 85254 1 + 2694 Ca ion P-type ATPase - none -
fig|6666666.65908.peg.1562 CDS gi|480984039|gb|AREP01000004.1| 86879 85251 -2 - 1629 ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.1563 CDS gi|480984039|gb|AREP01000004.1| 86958 87701 3 + 744 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65908.peg.1564 CDS gi|480984039|gb|AREP01000004.1| 88556 88128 -2 - 429 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65908.peg.1565 CDS gi|480984039|gb|AREP01000004.1| 89008 88553 -1 - 456 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65908.peg.1566 CDS gi|480984039|gb|AREP01000004.1| 90271 89009 -1 - 1263 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.65908.peg.1567 CDS gi|480984039|gb|AREP01000004.1| 91065 90307 -3 - 759 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65908.peg.1568 CDS gi|480984039|gb|AREP01000004.1| 92277 91111 -3 - 1167 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65908.peg.1569 CDS gi|480984039|gb|AREP01000004.1| 93728 92283 -2 - 1446 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65908.peg.1570 CDS gi|480984039|gb|AREP01000004.1| 94417 93725 -1 - 693 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65908.peg.1571 CDS gi|480984039|gb|AREP01000004.1| 94604 96250 2 + 1647 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.1572 CDS gi|480984039|gb|AREP01000004.1| 96256 97182 1 + 927 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65908.peg.1573 CDS gi|480984039|gb|AREP01000004.1| 97186 97953 1 + 768 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65908.peg.1574 CDS gi|480984039|gb|AREP01000004.1| 98016 99020 3 + 1005 Cytochrome oxidase assembly protein - none -
fig|6666666.65908.peg.1575 CDS gi|480984039|gb|AREP01000004.1| 99062 100030 2 + 969 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65908.peg.1576 CDS gi|480984039|gb|AREP01000004.1| 100989 100048 -3 - 942 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65908.peg.1577 CDS gi|480984039|gb|AREP01000004.1| 101382 103493 3 + 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65908.peg.1578 CDS gi|480984039|gb|AREP01000004.1| 103537 104619 1 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.65908.peg.1579 CDS gi|480984039|gb|AREP01000004.1| 104718 106256 3 + 1539 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65908.peg.1580 CDS gi|480984039|gb|AREP01000004.1| 106286 107224 2 + 939 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65908.peg.1581 CDS gi|480984039|gb|AREP01000004.1| 107251 107976 1 + 726 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65908.peg.1582 CDS gi|480984039|gb|AREP01000004.1| 108272 108039 -2 - 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65908.peg.1583 CDS gi|480984039|gb|AREP01000004.1| 111117 108352 -3 - 2766 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Fermentations: Mixed acid;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65908.peg.1584 CDS gi|480984039|gb|AREP01000004.1| 111984 111202 -3 - 783 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65908.peg.1585 CDS gi|480984039|gb|AREP01000004.1| 113235 112018 -3 - 1218 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65908.peg.1586 CDS gi|480984039|gb|AREP01000004.1| 114401 113397 -2 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65908.peg.1587 CDS gi|480984039|gb|AREP01000004.1| 115745 114762 -2 - 984 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65908.peg.1588 CDS gi|480984039|gb|AREP01000004.1| 116776 115802 -1 - 975 Hypothetical protein UPF0052 - none -
fig|6666666.65908.peg.1589 CDS gi|480984039|gb|AREP01000004.1| 117690 116803 -3 - 888 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.65908.peg.1590 CDS gi|480984039|gb|AREP01000004.1| 119823 117712 -3 - 2112 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65908.peg.1591 CDS gi|480984039|gb|AREP01000004.1| 120372 119827 -3 - 546 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65908.peg.1592 CDS gi|480984039|gb|AREP01000004.1| 120923 120441 -2 - 483 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.65908.peg.1593 CDS gi|480984039|gb|AREP01000004.1| 122188 120935 -1 - 1254 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65908.peg.1594 CDS gi|480984039|gb|AREP01000004.1| 122787 122200 -3 - 588 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65908.peg.1595 CDS gi|480984039|gb|AREP01000004.1| 123751 122768 -1 - 984 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65908.peg.1596 CDS gi|480984039|gb|AREP01000004.1| 124406 123753 -2 - 654 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65908.peg.1597 CDS gi|480984039|gb|AREP01000004.1| 125739 124417 -3 - 1323 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.65908.peg.1598 CDS gi|480984039|gb|AREP01000004.1| 126773 125838 -2 - 936 Methionyl-tRNA formyltransferase (EC 2.1.2.9) CBSS-89187.3.peg.2957;
Translation initiation factors bacterial
fig|6666666.65908.peg.1599 CDS gi|480984039|gb|AREP01000004.1| 127291 126779 -1 - 513 Peptide deformylase (EC 3.5.1.88) CBSS-89187.3.peg.2957;
Translation termination factors bacterial
fig|6666666.65908.peg.1600 CDS gi|480984039|gb|AREP01000004.1| 129377 127359 -2 - 2019 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65908.peg.1601 CDS gi|480984039|gb|AREP01000004.1| 130611 129391 -3 - 1221 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.65908.peg.1602 CDS gi|480984039|gb|AREP01000004.1| 131953 130721 -1 - 1233 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65908.peg.1603 CDS gi|480984039|gb|AREP01000004.1| 132376 132083 -1 - 294 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65908.peg.1604 CDS gi|480984039|gb|AREP01000004.1| 132982 132383 -1 - 600 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65908.peg.1605 CDS gi|480984039|gb|AREP01000004.1| 133310 132987 -2 - 324 integration host factor - none -
fig|6666666.65908.peg.1606 CDS gi|480984039|gb|AREP01000004.1| 134333 133539 -2 - 795 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.65908.peg.1607 CDS gi|480984039|gb|AREP01000004.1| 137686 134330 -1 - 3357 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.1608 CDS gi|480984039|gb|AREP01000004.1| 138883 137708 -1 - 1176 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.1609 CDS gi|480984039|gb|AREP01000004.1| 140190 138895 -3 - 1296 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.1610 CDS gi|480984039|gb|AREP01000004.1| 141200 140271 -2 - 930 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.1611 CDS gi|480984039|gb|AREP01000004.1| 141766 141197 -1 - 570 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.65908.peg.1612 CDS gi|480984039|gb|AREP01000004.1| 141891 143246 3 + 1356 Cell division inhibitor Persister Cells
fig|6666666.65908.peg.1613 CDS gi|480984039|gb|AREP01000004.1| 143267 143749 2 + 483 hypothetical protein - none -
fig|6666666.65908.peg.1614 CDS gi|480984039|gb|AREP01000004.1| 143739 144182 3 + 444 FIG00546283: hypothetical protein - none -
fig|6666666.65908.peg.1615 CDS gi|480984039|gb|AREP01000004.1| 144264 145346 3 + 1083 hypothetical protein - none -
fig|6666666.65908.peg.1616 CDS gi|480984039|gb|AREP01000004.1| 146203 145343 -1 - 861 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.65908.peg.1617 CDS gi|480984039|gb|AREP01000004.1| 146694 146215 -3 - 480 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65908.peg.1618 CDS gi|480984039|gb|AREP01000004.1| 147257 146694 -2 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65908.peg.1619 CDS gi|480984039|gb|AREP01000004.1| 148392 147301 -3 - 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65908.peg.1620 CDS gi|480984039|gb|AREP01000004.1| 148832 148398 -2 - 435 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65908.peg.1621 CDS gi|480984039|gb|AREP01000004.1| 149909 148839 -2 - 1071 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65908.peg.1622 CDS gi|480984039|gb|AREP01000004.1| 150496 149951 -1 - 546 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65908.peg.1623 CDS gi|480984039|gb|AREP01000004.1| 151724 150498 -2 - 1227 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65908.peg.1624 CDS gi|480984039|gb|AREP01000004.1| 152132 151764 -2 - 369 signal peptidase - none -
fig|6666666.65908.peg.1625 CDS gi|480984039|gb|AREP01000004.1| 152985 152176 -3 - 810 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65908.peg.1626 CDS gi|480984039|gb|AREP01000004.1| 154164 153001 -3 - 1164 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65908.peg.1627 CDS gi|480984039|gb|AREP01000004.1| 154679 154161 -2 - 519 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65908.peg.1628 CDS gi|480984039|gb|AREP01000004.1| 157510 154832 -1 - 2679 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65908.peg.1629 CDS gi|480984039|gb|AREP01000004.1| 158924 157560 -2 - 1365 ATPase, AAA family - none -
fig|6666666.65908.peg.1630 CDS gi|480984039|gb|AREP01000004.1| 160221 158947 -3 - 1275 FIG00544116: hypothetical protein - none -
fig|6666666.65908.peg.1631 CDS gi|480984039|gb|AREP01000004.1| 162166 160340 -1 - 1827 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65908.peg.1632 CDS gi|480984039|gb|AREP01000004.1| 162413 163219 2 + 807 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65908.peg.1633 CDS gi|480984039|gb|AREP01000004.1| 163252 163989 1 + 738 Putative CBS domain containing protein - none -
fig|6666666.65908.peg.1634 CDS gi|480984039|gb|AREP01000004.1| 164059 165192 1 + 1134 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.65908.peg.1635 CDS gi|480984039|gb|AREP01000004.1| 165198 165866 3 + 669 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.65908.peg.1636 CDS gi|480984039|gb|AREP01000004.1| 166025 167365 2 + 1341 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65908.peg.1637 CDS gi|480984039|gb|AREP01000004.1| 168673 167384 -1 - 1290 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65908.peg.1638 CDS gi|480984039|gb|AREP01000004.1| 169346 168693 -2 - 654 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.65908.peg.1639 CDS gi|480984039|gb|AREP01000004.1| 169938 169438 -3 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.65908.peg.1640 CDS gi|480984039|gb|AREP01000004.1| 170075 170953 2 + 879 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65908.peg.1641 CDS gi|480984039|gb|AREP01000004.1| 171316 171648 1 + 333 hypothetical protein - none -
fig|6666666.65908.peg.1642 CDS gi|480984039|gb|AREP01000004.1| 172307 171738 -2 - 570 hypothetical protein - none -
fig|6666666.65908.peg.1643 CDS gi|480984039|gb|AREP01000004.1| 174525 172402 -3 - 2124 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.65908.peg.1644 CDS gi|480984039|gb|AREP01000004.1| 176774 174702 -2 - 2073 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65908.peg.1645 CDS gi|480984039|gb|AREP01000004.1| 177630 177067 -3 - 564 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65908.peg.1646 CDS gi|480984039|gb|AREP01000004.1| 179251 177617 -1 - 1635 dipeptide-binding protein DciAE - none -
fig|6666666.65908.peg.1647 CDS gi|480984039|gb|AREP01000004.1| 180513 179305 -3 - 1209 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65908.peg.1648 CDS gi|480984039|gb|AREP01000004.1| 182411 180516 -2 - 1896 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65908.peg.1649 CDS gi|480984039|gb|AREP01000004.1| 182947 182552 -1 - 396 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.65908.peg.1650 CDS gi|480984039|gb|AREP01000004.1| 184097 183009 -2 - 1089 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65908.peg.1651 CDS gi|480984039|gb|AREP01000004.1| 184730 184110 -2 - 621 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65908.peg.1652 CDS gi|480984039|gb|AREP01000004.1| 185242 184727 -1 - 516 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65908.peg.1653 CDS gi|480984039|gb|AREP01000004.1| 186419 185433 -2 - 987 Mobile element protein - none -
fig|6666666.65908.peg.1654 CDS gi|480984039|gb|AREP01000004.1| 187238 186471 -2 - 768 hypothetical protein - none -
fig|6666666.65908.peg.1655 CDS gi|480984039|gb|AREP01000004.1| 188184 187252 -3 - 933 hypothetical protein - none -
fig|6666666.65908.peg.1656 CDS gi|480984042|gb|AREP01000003.1| 374 487 2 + 114 hypothetical protein - none -
fig|6666666.65908.peg.1657 CDS gi|480984042|gb|AREP01000003.1| 484 924 1 + 441 Endoglucanase (EC 3.2.1.4) Mannose Metabolism
fig|6666666.65908.peg.1658 CDS gi|480984042|gb|AREP01000003.1| 2278 932 -1 - 1347 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.65908.peg.1659 CDS gi|480984042|gb|AREP01000003.1| 3271 2288 -1 - 984 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65908.peg.1660 CDS gi|480984042|gb|AREP01000003.1| 3386 4477 2 + 1092 hypothetical protein - none -
fig|6666666.65908.peg.1661 CDS gi|480984042|gb|AREP01000003.1| 5668 4439 -1 - 1230 hypothetical protein - none -
fig|6666666.65908.peg.1662 CDS gi|480984042|gb|AREP01000003.1| 7038 5680 -3 - 1359 aminopeptidase N - none -
fig|6666666.65908.peg.1663 CDS gi|480984042|gb|AREP01000003.1| 8978 7047 -2 - 1932 Putative prolyl oligopeptidase family protein - none -
fig|6666666.65908.peg.1664 CDS gi|480984042|gb|AREP01000003.1| 10148 9015 -2 - 1134 FIG00544202: hypothetical protein - none -
fig|6666666.65908.peg.1665 CDS gi|480984042|gb|AREP01000003.1| 10402 10518 1 + 117 hypothetical protein - none -
fig|6666666.65908.peg.1666 CDS gi|480984042|gb|AREP01000003.1| 11823 10585 -3 - 1239 probable antigen 85 protein precursor - none -
fig|6666666.65908.peg.1667 CDS gi|480984042|gb|AREP01000003.1| 11952 13382 3 + 1431 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65908.peg.1668 CDS gi|480984042|gb|AREP01000003.1| 13502 14596 2 + 1095 hypothetical protein - none -
fig|6666666.65908.peg.1669 CDS gi|480984042|gb|AREP01000003.1| 15996 14593 -3 - 1404 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.65908.peg.1670 CDS gi|480984042|gb|AREP01000003.1| 16449 17207 3 + 759 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65908.peg.1671 CDS gi|480984042|gb|AREP01000003.1| 17221 19230 1 + 2010 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65908.peg.1672 CDS gi|480984042|gb|AREP01000003.1| 19230 19979 3 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65908.peg.1673 CDS gi|480984042|gb|AREP01000003.1| 20048 20419 2 + 372 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.65908.peg.1674 CDS gi|480984042|gb|AREP01000003.1| 20563 21879 1 + 1317 FIG00544632: hypothetical protein - none -
fig|6666666.65908.peg.1675 CDS gi|480984042|gb|AREP01000003.1| 21918 22598 3 + 681 hypothetical protein - none -
fig|6666666.65908.peg.1676 CDS gi|480984042|gb|AREP01000003.1| 22599 22910 3 + 312 hypothetical membrane protein - none -
fig|6666666.65908.peg.1677 CDS gi|480984042|gb|AREP01000003.1| 22972 23463 1 + 492 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65908.peg.1678 CDS gi|480984042|gb|AREP01000003.1| 24223 23432 -1 - 792 hypothetical protein - none -
fig|6666666.65908.peg.1679 CDS gi|480984042|gb|AREP01000003.1| 25049 24291 -2 - 759 Methylase of polypeptide chain release factors - none -
fig|6666666.65908.peg.1680 CDS gi|480984042|gb|AREP01000003.1| 25627 25133 -1 - 495 FIG00546961: hypothetical protein - none -
fig|6666666.65908.peg.1681 CDS gi|480984042|gb|AREP01000003.1| 25652 26737 2 + 1086 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65908.peg.1682 CDS gi|480984042|gb|AREP01000003.1| 27570 26734 -3 - 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.1683 CDS gi|480984042|gb|AREP01000003.1| 28577 27567 -2 - 1011 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.1684 CDS gi|480984042|gb|AREP01000003.1| 29883 28594 -3 - 1290 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.1685 CDS gi|480984042|gb|AREP01000003.1| 31020 29983 -3 - 1038 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.1686 CDS gi|480984042|gb|AREP01000003.1| 40210 31139 -1 - 9072 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65908.peg.1687 CDS gi|480984042|gb|AREP01000003.1| 40385 42145 2 + 1761 hypothetical protein - none -
fig|6666666.65908.peg.1688 CDS gi|480984042|gb|AREP01000003.1| 42402 42142 -3 - 261 hypothetical protein - none -
fig|6666666.65908.peg.1689 CDS gi|480984042|gb|AREP01000003.1| 44042 42432 -2 - 1611 Putative oxidase - none -
fig|6666666.65908.peg.1690 CDS gi|480984042|gb|AREP01000003.1| 46084 44366 -1 - 1719 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.1691 CDS gi|480984042|gb|AREP01000003.1| 47913 46204 -3 - 1710 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.1692 CDS gi|480984042|gb|AREP01000003.1| 48048 49325 3 + 1278 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65908.peg.1693 CDS gi|480984042|gb|AREP01000003.1| 49410 50156 3 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65908.peg.1694 CDS gi|480984042|gb|AREP01000003.1| 50173 51426 1 + 1254 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65908.peg.1695 CDS gi|480984042|gb|AREP01000003.1| 51423 52115 3 + 693 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65908.peg.1696 CDS gi|480984042|gb|AREP01000003.1| 52126 53208 1 + 1083 hypothetical protein - none -
fig|6666666.65908.peg.1697 CDS gi|480984042|gb|AREP01000003.1| 53858 53490 -2 - 369 hypothetical protein - none -
fig|6666666.65908.peg.1698 CDS gi|480984042|gb|AREP01000003.1| 54143 54679 2 + 537 Protein yceI precursor - none -
fig|6666666.65908.peg.1699 CDS gi|480984042|gb|AREP01000003.1| 55583 54687 -2 - 897 FIG00543972: hypothetical protein - none -
fig|6666666.65908.peg.1700 CDS gi|480984042|gb|AREP01000003.1| 55639 56571 1 + 933 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65908.peg.1701 CDS gi|480984042|gb|AREP01000003.1| 56572 57426 1 + 855 hypothetical protein - none -
fig|6666666.65908.peg.1702 CDS gi|480984042|gb|AREP01000003.1| 57458 58273 2 + 816 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65908.peg.1703 CDS gi|480984042|gb|AREP01000003.1| 58416 58607 3 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65908.peg.1704 CDS gi|480984042|gb|AREP01000003.1| 59261 59055 -2 - 207 hypothetical protein - none -
fig|6666666.65908.peg.1705 CDS gi|480984042|gb|AREP01000003.1| 60211 59315 -1 - 897 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65908.peg.1706 CDS gi|480984042|gb|AREP01000003.1| 61251 60214 -3 - 1038 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65908.peg.1707 CDS gi|480984042|gb|AREP01000003.1| 61418 61639 2 + 222 Glutaredoxin-like domain protein - none -
fig|6666666.65908.peg.1708 CDS gi|480984042|gb|AREP01000003.1| 61794 61663 -3 - 132 hypothetical protein - none -
fig|6666666.65908.peg.1709 CDS gi|480984042|gb|AREP01000003.1| 61711 63066 1 + 1356 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1710 CDS gi|480984042|gb|AREP01000003.1| 63068 63949 2 + 882 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1711 CDS gi|480984042|gb|AREP01000003.1| 63952 64305 1 + 354 hypothetical protein - none -
fig|6666666.65908.peg.1712 CDS gi|480984042|gb|AREP01000003.1| 64604 66301 2 + 1698 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1713 CDS gi|480984042|gb|AREP01000003.1| 66390 67781 3 + 1392 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65908.peg.1714 CDS gi|480984042|gb|AREP01000003.1| 67890 68891 3 + 1002 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1715 CDS gi|480984042|gb|AREP01000003.1| 69008 69526 2 + 519 hypothetical membrane protein - none -
fig|6666666.65908.peg.1716 CDS gi|480984042|gb|AREP01000003.1| 69542 70027 2 + 486 hypothetical membrane protein - none -
fig|6666666.65908.peg.1717 CDS gi|480984042|gb|AREP01000003.1| 70024 72615 1 + 2592 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65908.peg.1718 CDS gi|480984042|gb|AREP01000003.1| 72635 72985 2 + 351 hypothetical protein - none -
fig|6666666.65908.peg.1719 CDS gi|480984042|gb|AREP01000003.1| 73045 74094 1 + 1050 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1720 CDS gi|480984042|gb|AREP01000003.1| 74095 75495 1 + 1401 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1721 CDS gi|480984042|gb|AREP01000003.1| 75523 76251 1 + 729 hypothetical protein - none -
fig|6666666.65908.peg.1722 CDS gi|480984042|gb|AREP01000003.1| 77123 76269 -2 - 855 putative dehydrogenase - none -
fig|6666666.65908.peg.1723 CDS gi|480984042|gb|AREP01000003.1| 77202 78542 3 + 1341 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.1724 CDS gi|480984042|gb|AREP01000003.1| 78558 79166 3 + 609 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.65908.peg.1725 CDS gi|480984042|gb|AREP01000003.1| 79167 79742 3 + 576 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65908.peg.1726 CDS gi|480984042|gb|AREP01000003.1| 79735 80520 1 + 786 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65908.peg.1727 CDS gi|480984042|gb|AREP01000003.1| 80543 82186 2 + 1644 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65908.peg.1728 CDS gi|480984042|gb|AREP01000003.1| 82230 83258 3 + 1029 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65908.peg.1729 CDS gi|480984042|gb|AREP01000003.1| 83617 83871 1 + 255 FIG00545941: hypothetical protein - none -
fig|6666666.65908.peg.1730 CDS gi|480984042|gb|AREP01000003.1| 84181 83885 -1 - 297 FIG00544106: hypothetical protein - none -
fig|6666666.65908.peg.1731 CDS gi|480984042|gb|AREP01000003.1| 84226 84537 1 + 312 FIG00544880: hypothetical protein - none -
fig|6666666.65908.peg.1732 CDS gi|480984042|gb|AREP01000003.1| 85476 84541 -3 - 936 Auxin Efflux Carrier - none -
fig|6666666.65908.peg.1733 CDS gi|480984042|gb|AREP01000003.1| 85686 86792 3 + 1107 hypothetical protein - none -
fig|6666666.65908.peg.1734 CDS gi|480984042|gb|AREP01000003.1| 87694 86789 -1 - 906 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65908.peg.1735 CDS gi|480984042|gb|AREP01000003.1| 88849 87698 -1 - 1152 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65908.peg.1736 CDS gi|480984042|gb|AREP01000003.1| 89471 88875 -2 - 597 hypothetical protein - none -
fig|6666666.65908.peg.1737 CDS gi|480984042|gb|AREP01000003.1| 89567 89854 2 + 288 hypothetical protein - none -
fig|6666666.65908.peg.1738 CDS gi|480984042|gb|AREP01000003.1| 89851 90768 1 + 918 hypothetical protein - none -
fig|6666666.65908.peg.1739 CDS gi|480984042|gb|AREP01000003.1| 91091 90954 -2 - 138 hypothetical protein - none -
fig|6666666.65908.peg.1740 CDS gi|480984042|gb|AREP01000003.1| 91218 91451 3 + 234 hypothetical protein - none -
fig|6666666.65908.peg.1741 CDS gi|480984042|gb|AREP01000003.1| 92452 91517 -1 - 936 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65908.peg.1742 CDS gi|480984042|gb|AREP01000003.1| 92472 93422 3 + 951 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65908.peg.1743 CDS gi|480984042|gb|AREP01000003.1| 93433 93915 1 + 483 hypothetical protein - none -
fig|6666666.65908.peg.1744 CDS gi|480984042|gb|AREP01000003.1| 93939 96260 3 + 2322 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65908.peg.1745 CDS gi|480984042|gb|AREP01000003.1| 96266 97888 2 + 1623 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65908.peg.1746 CDS gi|480984042|gb|AREP01000003.1| 97888 98325 1 + 438 FIG00543979: hypothetical protein - none -
fig|6666666.65908.peg.1747 CDS gi|480984042|gb|AREP01000003.1| 98350 99552 1 + 1203 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.65908.peg.1748 CDS gi|480984042|gb|AREP01000003.1| 99974 99555 -2 - 420 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN - none -
fig|6666666.65908.peg.1749 CDS gi|480984042|gb|AREP01000003.1| 100076 100765 2 + 690 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65908.peg.1750 CDS gi|480984042|gb|AREP01000003.1| 102106 100877 -1 - 1230 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65908.peg.1751 CDS gi|480984042|gb|AREP01000003.1| 102223 103239 1 + 1017 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoinds for Quinones
fig|6666666.65908.peg.1752 CDS gi|480984042|gb|AREP01000003.1| 104000 104326 2 + 327 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65908.peg.1753 CDS gi|480984042|gb|AREP01000003.1| 104516 105523 2 + 1008 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65908.peg.1754 CDS gi|480984042|gb|AREP01000003.1| 105697 106125 1 + 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65908.peg.1755 CDS gi|480984042|gb|AREP01000003.1| 106188 106904 3 + 717 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65908.peg.1756 CDS gi|480984042|gb|AREP01000003.1| 106990 107667 1 + 678 Putative membrane protein - none -
fig|6666666.65908.peg.1757 CDS gi|480984042|gb|AREP01000003.1| 107664 108665 3 + 1002 hypothetical protein - none -
fig|6666666.65908.peg.1758 CDS gi|480984042|gb|AREP01000003.1| 108749 110260 2 + 1512 Phytoene dehydrogenase and related proteins - none -
fig|6666666.65908.peg.1759 CDS gi|480984042|gb|AREP01000003.1| 110257 110685 1 + 429 hypothetical protein - none -
fig|6666666.65908.peg.1760 CDS gi|480984042|gb|AREP01000003.1| 110686 111561 1 + 876 hypothetical protein - none -
fig|6666666.65908.peg.1761 CDS gi|480984042|gb|AREP01000003.1| 111960 111649 -3 - 312 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) Nitrate and nitrite ammonification
fig|6666666.65908.peg.1762 CDS gi|480984042|gb|AREP01000003.1| 114474 111973 -3 - 2502 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Nitrate and nitrite ammonification
fig|6666666.65908.peg.1763 CDS gi|480984042|gb|AREP01000003.1| 114760 115356 1 + 597 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65908.peg.1764 CDS gi|480984042|gb|AREP01000003.1| 115430 115819 2 + 390 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65908.peg.1765 CDS gi|480984042|gb|AREP01000003.1| 116021 116821 2 + 801 hypothetical protein - none -
fig|6666666.65908.peg.1766 CDS gi|480984042|gb|AREP01000003.1| 117180 116818 -3 - 363 hypothetical protein - none -
fig|6666666.65908.peg.1767 CDS gi|480984042|gb|AREP01000003.1| 117637 121113 1 + 3477 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65908.peg.1768 CDS gi|480984042|gb|AREP01000003.1| 121260 125258 3 + 3999 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65908.peg.1769 CDS gi|480984042|gb|AREP01000003.1| 125583 125957 3 + 375 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.65908.peg.1770 CDS gi|480984042|gb|AREP01000003.1| 125960 126427 2 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.65908.peg.1771 CDS gi|480984042|gb|AREP01000003.1| 126690 128816 3 + 2127 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65908.peg.1772 CDS gi|480984042|gb|AREP01000003.1| 129275 129159 -2 - 117 FIG00548059: hypothetical protein - none -
fig|6666666.65908.peg.1773 CDS gi|480984042|gb|AREP01000003.1| 129240 130430 3 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65908.peg.1774 CDS gi|480984042|gb|AREP01000003.1| 130551 131249 3 + 699 hypothetical protein - none -
fig|6666666.65908.peg.1775 CDS gi|480984042|gb|AREP01000003.1| 131803 131246 -1 - 558 hypothetical protein - none -
fig|6666666.65908.peg.1776 CDS gi|480984042|gb|AREP01000003.1| 132276 131800 -3 - 477 hypothetical protein - none -
fig|6666666.65908.peg.1777 CDS gi|480984042|gb|AREP01000003.1| 132932 132360 -2 - 573 hypothetical protein - none -
fig|6666666.65908.peg.1778 CDS gi|480984042|gb|AREP01000003.1| 133132 132929 -1 - 204 hypothetical protein - none -
fig|6666666.65908.peg.1779 CDS gi|480984042|gb|AREP01000003.1| 133473 133129 -3 - 345 hypothetical protein - none -
fig|6666666.65908.peg.1780 CDS gi|480984042|gb|AREP01000003.1| 133947 133483 -3 - 465 Alkaline shock protein 23 - none -
fig|6666666.65908.peg.1781 CDS gi|480984042|gb|AREP01000003.1| 134644 134949 1 + 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.65908.peg.1782 CDS gi|480984042|gb|AREP01000003.1| 134989 135645 1 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65908.peg.1783 CDS gi|480984042|gb|AREP01000003.1| 135642 136307 3 + 666 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65908.peg.1784 CDS gi|480984042|gb|AREP01000003.1| 136307 136609 2 + 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65908.peg.1785 CDS gi|480984042|gb|AREP01000003.1| 136643 137479 2 + 837 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65908.peg.1786 CDS gi|480984042|gb|AREP01000003.1| 137496 137771 3 + 276 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.65908.peg.1787 CDS gi|480984042|gb|AREP01000003.1| 137775 138146 3 + 372 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65908.peg.1788 CDS gi|480984042|gb|AREP01000003.1| 138146 138889 2 + 744 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.65908.peg.1789 CDS gi|480984042|gb|AREP01000003.1| 138895 139311 1 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65908.peg.1790 CDS gi|480984042|gb|AREP01000003.1| 139311 139541 3 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65908.peg.1791 CDS gi|480984042|gb|AREP01000003.1| 139544 139837 2 + 294 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.65908.peg.1792 CDS gi|480984042|gb|AREP01000003.1| 141542 139941 -2 - 1602 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.65908.peg.1793 CDS gi|480984042|gb|AREP01000003.1| 143160 141535 -3 - 1626 putative ABC transporter - none -
fig|6666666.65908.peg.1794 CDS gi|480984042|gb|AREP01000003.1| 143147 143281 2 + 135 hypothetical protein - none -
fig|6666666.65908.peg.1795 CDS gi|480984042|gb|AREP01000003.1| 143287 144147 1 + 861 hypothetical protein - none -
fig|6666666.65908.peg.1796 CDS gi|480984042|gb|AREP01000003.1| 144331 144699 1 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65908.peg.1797 CDS gi|480984042|gb|AREP01000003.1| 144704 145018 2 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65908.peg.1798 CDS gi|480984042|gb|AREP01000003.1| 145020 145598 3 + 579 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65908.peg.1799 CDS gi|480984042|gb|AREP01000003.1| 145949 146737 2 + 789 formate/nitrite transporter family protein - none -
fig|6666666.65908.peg.1800 CDS gi|480984042|gb|AREP01000003.1| 147040 147669 1 + 630 Phage protein - none -
fig|6666666.65908.peg.1801 CDS gi|480984042|gb|AREP01000003.1| 148493 147666 -2 - 828 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.65908.peg.1802 CDS gi|480984042|gb|AREP01000003.1| 148786 148493 -1 - 294 hypothetical protein - none -
fig|6666666.65908.peg.1803 CDS gi|480984042|gb|AREP01000003.1| 150062 148827 -2 - 1236 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.1804 CDS gi|480984042|gb|AREP01000003.1| 152350 150170 -1 - 2181 Putative formate dehydrogenase oxidoreductase protein Formate hydrogenase
fig|6666666.65908.peg.1805 CDS gi|480984042|gb|AREP01000003.1| 152342 152674 2 + 333 hypothetical protein - none -
fig|6666666.65908.peg.1806 CDS gi|480984042|gb|AREP01000003.1| 152758 153156 1 + 399 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.65908.peg.1807 CDS gi|480984042|gb|AREP01000003.1| 153174 153710 3 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65908.peg.1808 CDS gi|480984042|gb|AREP01000003.1| 153713 154117 2 + 405 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65908.peg.1809 CDS gi|480984042|gb|AREP01000003.1| 154158 154790 3 + 633 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.65908.peg.1810 CDS gi|480984042|gb|AREP01000003.1| 154794 154979 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65908.peg.1811 CDS gi|480984042|gb|AREP01000003.1| 154988 155437 2 + 450 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65908.peg.1812 CDS gi|480984042|gb|AREP01000003.1| 156195 155644 -3 - 552 Putative oxidoreductase component of anaerobic dehydrogenases; Chaperone protein TorD - none -
fig|6666666.65908.peg.1813 CDS gi|480984042|gb|AREP01000003.1| 157088 156195 -2 - 894 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.65908.peg.1814 CDS gi|480984042|gb|AREP01000003.1| 157809 157150 -3 - 660 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.65908.peg.1815 CDS gi|480984042|gb|AREP01000003.1| 160342 157829 -1 - 2514 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.65908.peg.1816 CDS gi|480984042|gb|AREP01000003.1| 160623 161942 3 + 1320 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65908.peg.1817 CDS gi|480984042|gb|AREP01000003.1| 161942 162487 2 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65908.peg.1818 CDS gi|480984042|gb|AREP01000003.1| 162593 163390 2 + 798 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65908.peg.1819 CDS gi|480984042|gb|AREP01000003.1| 163443 164264 3 + 822 Putative secreted protein - none -
fig|6666666.65908.peg.1820 CDS gi|480984042|gb|AREP01000003.1| 164450 164668 2 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65908.peg.1821 CDS gi|480984042|gb|AREP01000003.1| 164853 165221 3 + 369 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.65908.peg.1822 CDS gi|480984042|gb|AREP01000003.1| 165225 165614 3 + 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.65908.peg.1823 CDS gi|480984042|gb|AREP01000003.1| 165640 166245 1 + 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.65908.peg.1824 CDS gi|480984042|gb|AREP01000003.1| 166373 167386 2 + 1014 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65908.peg.1825 CDS gi|480984042|gb|AREP01000003.1| 167431 167967 1 + 537 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65908.peg.1826 CDS gi|480984042|gb|AREP01000003.1| 168065 168997 2 + 933 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65908.peg.1827 CDS gi|480984042|gb|AREP01000003.1| 169065 171230 3 + 2166 FIG00546597: hypothetical protein - none -
fig|6666666.65908.peg.1828 CDS gi|480984042|gb|AREP01000003.1| 171421 172572 1 + 1152 hypothetical protein - none -
fig|6666666.65908.peg.1829 CDS gi|480984042|gb|AREP01000003.1| 173003 174199 2 + 1197 FAD/FMN-containing dehydrogenases - none -
fig|6666666.65908.peg.1830 CDS gi|480984042|gb|AREP01000003.1| 174254 175576 2 + 1323 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65908.peg.1831 CDS gi|480984042|gb|AREP01000003.1| 175951 175667 -1 - 285 hypothetical protein - none -
fig|6666666.65908.peg.1832 CDS gi|480984042|gb|AREP01000003.1| 177122 176046 -2 - 1077 Type VII secretion-associated serine protease mycosin - none -
fig|6666666.65908.peg.1833 CDS gi|480984042|gb|AREP01000003.1| 178594 177236 -1 - 1359 hypothetical protein - none -
fig|6666666.65908.peg.1834 CDS gi|480984042|gb|AREP01000003.1| 178700 182377 2 + 3678 FtsK/SpoIIIE family protein - none -
fig|6666666.65908.peg.1835 CDS gi|480984042|gb|AREP01000003.1| 182374 183342 1 + 969 hypothetical protein - none -
fig|6666666.65908.peg.1836 CDS gi|480984042|gb|AREP01000003.1| 183486 183836 3 + 351 hypothetical protein - none -
fig|6666666.65908.peg.1837 CDS gi|480984042|gb|AREP01000003.1| 183877 184173 1 + 297 hypothetical protein - none -
fig|6666666.65908.peg.1838 CDS gi|480984042|gb|AREP01000003.1| 184571 185014 2 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65908.peg.1839 CDS gi|480984042|gb|AREP01000003.1| 185014 185577 1 + 564 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.65908.peg.1840 CDS gi|480984042|gb|AREP01000003.1| 187802 186045 -2 - 1758 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - none -
fig|6666666.65908.peg.1841 CDS gi|480984042|gb|AREP01000003.1| 189103 188072 -1 - 1032 putative transcription regulator - none -
fig|6666666.65908.peg.1842 CDS gi|480984042|gb|AREP01000003.1| 189346 189155 -1 - 192 Catechol 1,2-dioxygenase 1 (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.65908.peg.1843 CDS gi|480984042|gb|AREP01000003.1| 189778 189530 -1 - 249 Mobile element protein - none -
fig|6666666.65908.peg.1844 CDS gi|480984045|gb|AREP01000002.1| 99 815 3 + 717 Mobile element protein - none -
fig|6666666.65908.peg.1845 CDS gi|480984045|gb|AREP01000002.1| 2691 1261 -3 - 1431 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65908.peg.1846 CDS gi|480984045|gb|AREP01000002.1| 3870 2812 -3 - 1059 hypothetical protein - none -
fig|6666666.65908.peg.1847 CDS gi|480984045|gb|AREP01000002.1| 4733 3867 -2 - 867 ABC transporter component, possibly Mn transport - none -
fig|6666666.65908.peg.1848 CDS gi|480984045|gb|AREP01000002.1| 5467 4730 -1 - 738 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65908.peg.1849 CDS gi|480984045|gb|AREP01000002.1| 6429 5467 -3 - 963 hypothetical protein - none -
fig|6666666.65908.peg.1850 CDS gi|480984045|gb|AREP01000002.1| 7994 6429 -2 - 1566 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65908.peg.1851 CDS gi|480984045|gb|AREP01000002.1| 9538 7994 -1 - 1545 FIG00548024: hypothetical protein - none -
fig|6666666.65908.peg.1852 CDS gi|480984045|gb|AREP01000002.1| 9786 10748 3 + 963 hypothetical protein - none -
fig|6666666.65908.peg.1853 CDS gi|480984045|gb|AREP01000002.1| 10978 11955 1 + 978 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65908.peg.1854 CDS gi|480984045|gb|AREP01000002.1| 13676 15532 2 + 1857 hypothetical protein - none -
fig|6666666.65908.peg.1855 CDS gi|480984045|gb|AREP01000002.1| 16365 15574 -3 - 792 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65908.peg.1856 CDS gi|480984045|gb|AREP01000002.1| 16971 16387 -3 - 585 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65908.peg.1857 CDS gi|480984045|gb|AREP01000002.1| 18827 16971 -2 - 1857 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65908.peg.1858 CDS gi|480984045|gb|AREP01000002.1| 20394 18874 -3 - 1521 FIG00545237: hypothetical protein - none -
fig|6666666.65908.peg.1859 CDS gi|480984045|gb|AREP01000002.1| 21502 20486 -1 - 1017 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65908.peg.1860 CDS gi|480984045|gb|AREP01000002.1| 21749 21555 -2 - 195 hypothetical protein - none -
fig|6666666.65908.peg.1861 CDS gi|480984045|gb|AREP01000002.1| 24022 21752 -1 - 2271 Carbon starvation protein A Carbon Starvation
fig|6666666.65908.peg.1862 CDS gi|480984045|gb|AREP01000002.1| 25815 24232 -3 - 1584 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65908.peg.1863 CDS gi|480984045|gb|AREP01000002.1| 26680 25898 -1 - 783 FIG00545237: hypothetical protein - none -
fig|6666666.65908.peg.1864 CDS gi|480984045|gb|AREP01000002.1| 28556 26733 -2 - 1824 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.65908.peg.1865 CDS gi|480984045|gb|AREP01000002.1| 29535 28618 -3 - 918 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65908.peg.1866 CDS gi|480984045|gb|AREP01000002.1| 30667 29651 -1 - 1017 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65908.peg.1867 CDS gi|480984045|gb|AREP01000002.1| 31260 30751 -3 - 510 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65908.peg.1868 CDS gi|480984045|gb|AREP01000002.1| 33131 31263 -2 - 1869 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65908.peg.1869 CDS gi|480984045|gb|AREP01000002.1| 33415 35064 1 + 1650 FIG00544780: hypothetical protein - none -
fig|6666666.65908.peg.1870 CDS gi|480984045|gb|AREP01000002.1| 35150 35629 2 + 480 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65908.peg.1871 CDS gi|480984045|gb|AREP01000002.1| 35631 37472 3 + 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65908.peg.1872 CDS gi|480984045|gb|AREP01000002.1| 37494 38786 3 + 1293 FIG00546232: hypothetical protein - none -
fig|6666666.65908.peg.1873 CDS gi|480984045|gb|AREP01000002.1| 39684 40760 3 + 1077 Glutathione S-transferase domain protein CBSS-89187.3.peg.2957;
Single-Rhodanese-domain proteins
fig|6666666.65908.peg.1874 CDS gi|480984045|gb|AREP01000002.1| 41692 40757 -1 - 936 putative oxidoreductase - none -
fig|6666666.65908.peg.1875 CDS gi|480984045|gb|AREP01000002.1| 41751 42224 3 + 474 Transcriptional regulator, MarR family - none -
fig|6666666.65908.peg.1876 CDS gi|480984045|gb|AREP01000002.1| 43298 42228 -2 - 1071 Putative aldo/keto-reductase family protein - none -
fig|6666666.65908.peg.1877 CDS gi|480984045|gb|AREP01000002.1| 44506 43322 -1 - 1185 hypothetical protein - none -
fig|6666666.65908.peg.1878 CDS gi|480984045|gb|AREP01000002.1| 46120 44666 -1 - 1455 FIG00545305: hypothetical protein - none -
fig|6666666.65908.peg.1879 CDS gi|480984045|gb|AREP01000002.1| 47765 46266 -2 - 1500 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65908.peg.1880 CDS gi|480984045|gb|AREP01000002.1| 48755 47787 -2 - 969 Sodium-dependent transporter - none -
fig|6666666.65908.peg.1881 CDS gi|480984045|gb|AREP01000002.1| 48865 49710 1 + 846 hypothetical protein - none -
fig|6666666.65908.peg.1882 CDS gi|480984045|gb|AREP01000002.1| 50738 49707 -2 - 1032 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65908.peg.1883 CDS gi|480984045|gb|AREP01000002.1| 52020 50749 -3 - 1272 permease of the major facilitator superfamily - none -
fig|6666666.65908.peg.1884 CDS gi|480984045|gb|AREP01000002.1| 53662 52067 -1 - 1596 FIG00544204: hypothetical protein - none -
fig|6666666.65908.peg.1885 CDS gi|480984045|gb|AREP01000002.1| 54890 53709 -2 - 1182 hypothetical malic enzyme protein - none -
fig|6666666.65908.peg.1886 CDS gi|480984045|gb|AREP01000002.1| 56600 55116 -2 - 1485 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65908.peg.1887 CDS gi|480984045|gb|AREP01000002.1| 56902 56603 -1 - 300 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65908.peg.1888 CDS gi|480984045|gb|AREP01000002.1| 57002 57676 2 + 675 FIG00544014: hypothetical protein - none -
fig|6666666.65908.peg.1889 CDS gi|480984045|gb|AREP01000002.1| 59677 57659 -1 - 2019 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65908.peg.1890 CDS gi|480984045|gb|AREP01000002.1| 59707 60381 1 + 675 FIG00544413: hypothetical protein - none -
fig|6666666.65908.peg.1891 CDS gi|480984045|gb|AREP01000002.1| 61258 60374 -1 - 885 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.65908.peg.1892 CDS gi|480984045|gb|AREP01000002.1| 61406 62827 2 + 1422 hypothetical protein - none -
fig|6666666.65908.peg.1893 CDS gi|480984045|gb|AREP01000002.1| 63820 62801 -1 - 1020 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.65908.peg.1894 CDS gi|480984045|gb|AREP01000002.1| 63906 64715 3 + 810 Spermidine synthase-like protein - none -
fig|6666666.65908.peg.1895 CDS gi|480984045|gb|AREP01000002.1| 64851 65762 3 + 912 hypothetical protein - none -
fig|6666666.65908.peg.1896 CDS gi|480984045|gb|AREP01000002.1| 65775 66587 3 + 813 predicted protein - none -
fig|6666666.65908.peg.1897 CDS gi|480984045|gb|AREP01000002.1| 66591 67871 3 + 1281 Possible glycosyltransferase - none -
fig|6666666.65908.peg.1898 CDS gi|480984045|gb|AREP01000002.1| 67893 68939 3 + 1047 predicted protein - none -
fig|6666666.65908.peg.1899 CDS gi|480984045|gb|AREP01000002.1| 69985 68936 -1 - 1050 Putative hydrolase - none -
fig|6666666.65908.peg.1900 CDS gi|480984045|gb|AREP01000002.1| 71124 70042 -3 - 1083 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65908.peg.1901 CDS gi|480984045|gb|AREP01000002.1| 72107 71157 -2 - 951 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65908.peg.1902 CDS gi|480984045|gb|AREP01000002.1| 72904 72116 -1 - 789 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65908.peg.1903 CDS gi|480984045|gb|AREP01000002.1| 74122 72956 -1 - 1167 SAM-dependent methyltransferase - none -
fig|6666666.65908.peg.1904 CDS gi|480984045|gb|AREP01000002.1| 74975 74109 -2 - 867 FIG00996530: hypothetical protein - none -
fig|6666666.65908.peg.1905 CDS gi|480984045|gb|AREP01000002.1| 75826 74993 -1 - 834 ABC transporter, ATP-binding protein - none -
fig|6666666.65908.peg.1906 CDS gi|480984045|gb|AREP01000002.1| 75926 77950 2 + 2025 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.65908.peg.1907 CDS gi|480984045|gb|AREP01000002.1| 78044 80248 2 + 2205 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65908.peg.1908 CDS gi|480984045|gb|AREP01000002.1| 81126 80245 -3 - 882 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65908.peg.1909 CDS gi|480984045|gb|AREP01000002.1| 81435 81127 -3 - 309 FIG00544011: hypothetical protein - none -
fig|6666666.65908.peg.1910 CDS gi|480984045|gb|AREP01000002.1| 82461 81769 -3 - 693 FIG00996186: hypothetical protein - none -
fig|6666666.65908.peg.1911 CDS gi|480984045|gb|AREP01000002.1| 82765 82472 -1 - 294 hypothetical protein - none -
fig|6666666.65908.peg.1912 CDS gi|480984045|gb|AREP01000002.1| 83510 83142 -2 - 369 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1913 CDS gi|480984045|gb|AREP01000002.1| 84971 83520 -2 - 1452 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1914 CDS gi|480984045|gb|AREP01000002.1| 85949 84975 -2 - 975 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1915 CDS gi|480984045|gb|AREP01000002.1| 87676 86000 -1 - 1677 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1916 CDS gi|480984045|gb|AREP01000002.1| 88524 87694 -3 - 831 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1917 CDS gi|480984045|gb|AREP01000002.1| 89099 88530 -2 - 570 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1918 CDS gi|480984045|gb|AREP01000002.1| 89381 89142 -2 - 240 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1919 CDS gi|480984045|gb|AREP01000002.1| 90303 89494 -3 - 810 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65908.peg.1920 CDS gi|480984045|gb|AREP01000002.1| 91145 90705 -2 - 441 ATP synthase protein I - none -
fig|6666666.65908.peg.1921 CDS gi|480984045|gb|AREP01000002.1| 92354 91179 -2 - 1176 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.65908.peg.1922 CDS gi|480984045|gb|AREP01000002.1| 93014 92355 -2 - 660 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.65908.peg.1923 CDS gi|480984045|gb|AREP01000002.1| 93916 93041 -1 - 876 Methylase of polypeptide chain release factors - none -
fig|6666666.65908.peg.1924 CDS gi|480984045|gb|AREP01000002.1| 94958 93885 -2 - 1074 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.65908.peg.1925 CDS gi|480984045|gb|AREP01000002.1| 96790 94958 -1 - 1833 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65908.peg.1926 CDS gi|480984045|gb|AREP01000002.1| 97184 98917 2 + 1734 acyl-CoA synthetase - none -
fig|6666666.65908.peg.1927 CDS gi|480984045|gb|AREP01000002.1| 98993 100114 2 + 1122 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65908.peg.1928 CDS gi|480984045|gb|AREP01000002.1| 100126 101373 1 + 1248 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.65908.peg.1929 CDS gi|480984045|gb|AREP01000002.1| 101392 101868 1 + 477 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65908.peg.1930 CDS gi|480984045|gb|AREP01000002.1| 101865 102428 3 + 564 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.65908.peg.1931 CDS gi|480984045|gb|AREP01000002.1| 102922 102425 -1 - 498 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.65908.peg.1932 CDS gi|480984045|gb|AREP01000002.1| 103096 104433 1 + 1338 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.65908.peg.1933 CDS gi|480984045|gb|AREP01000002.1| 104505 108254 3 + 3750 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65908.peg.1934 CDS gi|480984045|gb|AREP01000002.1| 108254 109858 2 + 1605 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65908.peg.1935 CDS gi|480984045|gb|AREP01000002.1| 109855 110547 1 + 693 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65908.peg.1936 CDS gi|480984045|gb|AREP01000002.1| 110569 111354 1 + 786 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.65908.peg.1937 CDS gi|480984045|gb|AREP01000002.1| 111590 112243 2 + 654 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.65908.peg.1938 CDS gi|480984045|gb|AREP01000002.1| 112279 114168 1 + 1890 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) / Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.65908.peg.1939 CDS gi|480984045|gb|AREP01000002.1| 114187 114906 1 + 720 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN - none -
fig|6666666.65908.peg.1940 CDS gi|480984045|gb|AREP01000002.1| 115829 114903 -2 - 927 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65908.peg.1941 CDS gi|480984045|gb|AREP01000002.1| 117189 115852 -3 - 1338 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65908.peg.1942 CDS gi|480984045|gb|AREP01000002.1| 118663 117332 -1 - 1332 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.1943 CDS gi|480984045|gb|AREP01000002.1| 120278 118668 -2 - 1611 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65908.peg.1944 CDS gi|480984045|gb|AREP01000002.1| 122048 120372 -2 - 1677 L-lactate permease Lactate utilization
fig|6666666.65908.peg.1945 CDS gi|480984045|gb|AREP01000002.1| 122025 122150 3 + 126 hypothetical protein - none -
fig|6666666.65908.peg.1946 CDS gi|480984045|gb|AREP01000002.1| 122257 123042 1 + 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.65908.peg.1947 CDS gi|480984045|gb|AREP01000002.1| 123039 124571 3 + 1533 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.65908.peg.1948 CDS gi|480984045|gb|AREP01000002.1| 124572 125198 3 + 627 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.65908.peg.1949 CDS gi|480984045|gb|AREP01000002.1| 125346 126986 3 + 1641 predicted hydrolase or acyltransferase - none -
fig|6666666.65908.peg.1950 CDS gi|480984045|gb|AREP01000002.1| 129206 127317 -2 - 1890 Lincomycin resistance protein lmrB - none -
fig|6666666.65908.peg.1951 CDS gi|480984045|gb|AREP01000002.1| 129476 129694 2 + 219 hypothetical protein - none -
fig|6666666.65908.peg.1952 CDS gi|480984045|gb|AREP01000002.1| 129893 129663 -2 - 231 hypothetical protein - none -
fig|6666666.65908.peg.1953 CDS gi|480984045|gb|AREP01000002.1| 130512 130003 -3 - 510 Transcriptional regulator, MarR family - none -
fig|6666666.65908.peg.1954 CDS gi|480984045|gb|AREP01000002.1| 130734 131276 3 + 543 Protein yceI precursor - none -
fig|6666666.65908.peg.1955 CDS gi|480984045|gb|AREP01000002.1| 134056 131417 -1 - 2640 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.65908.peg.1956 CDS gi|480984045|gb|AREP01000002.1| 135216 134062 -3 - 1155 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65908.peg.1957 CDS gi|480984045|gb|AREP01000002.1| 136075 135266 -1 - 810 FIG00545674: hypothetical protein - none -
fig|6666666.65908.peg.1958 CDS gi|480984045|gb|AREP01000002.1| 139210 136079 -1 - 3132 Helicase, SNF2/RAD54 family - none -
fig|6666666.65908.peg.1959 CDS gi|480984045|gb|AREP01000002.1| 139357 140955 1 + 1599 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.65908.peg.1960 CDS gi|480984045|gb|AREP01000002.1| 140962 141639 1 + 678 FIG00544279: hypothetical protein - none -
fig|6666666.65908.peg.1961 CDS gi|480984045|gb|AREP01000002.1| 141682 142158 1 + 477 FIG00544250: hypothetical protein - none -
fig|6666666.65908.peg.1962 CDS gi|480984045|gb|AREP01000002.1| 144352 142277 -1 - 2076 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65908.peg.1963 CDS gi|480984045|gb|AREP01000002.1| 144646 145515 1 + 870 hypothetical protein - none -
fig|6666666.65908.peg.1964 CDS gi|480984045|gb|AREP01000002.1| 146076 145525 -3 - 552 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.65908.peg.1965 CDS gi|480984045|gb|AREP01000002.1| 146297 147151 2 + 855 hypothetical protein - none -
fig|6666666.65908.peg.1966 CDS gi|480984045|gb|AREP01000002.1| 147176 147574 2 + 399 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65908.peg.1967 CDS gi|480984045|gb|AREP01000002.1| 147571 150492 1 + 2922 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.65908.peg.1968 CDS gi|480984045|gb|AREP01000002.1| 151091 150525 -2 - 567 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.65908.peg.1969 CDS gi|480984045|gb|AREP01000002.1| 152472 151111 -3 - 1362 permease of the major facilitator superfamily - none -
fig|6666666.65908.peg.1970 CDS gi|480984045|gb|AREP01000002.1| 153362 152487 -2 - 876 hypothetical protein - none -
fig|6666666.65908.peg.1971 CDS gi|480984045|gb|AREP01000002.1| 154668 153430 -3 - 1239 putative multidrug resistance protein - none -
fig|6666666.65908.peg.1972 CDS gi|480984045|gb|AREP01000002.1| 154925 155257 2 + 333 hypothetical protein - none -
fig|6666666.65908.peg.1973 CDS gi|480984045|gb|AREP01000002.1| 156088 155267 -1 - 822 FIG00544678: hypothetical protein - none -
fig|6666666.65908.peg.1974 CDS gi|480984045|gb|AREP01000002.1| 157799 156192 -2 - 1608 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65908.peg.1975 CDS gi|480984045|gb|AREP01000002.1| 157948 158886 1 + 939 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.1976 CDS gi|480984045|gb|AREP01000002.1| 158912 162577 2 + 3666 FIG00543822: hypothetical protein - none -
fig|6666666.65908.peg.1977 CDS gi|480984045|gb|AREP01000002.1| 162781 166398 1 + 3618 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65908.peg.1978 CDS gi|480984045|gb|AREP01000002.1| 167430 166669 -3 - 762 hypothetical protein - none -
fig|6666666.65908.peg.1979 CDS gi|480984045|gb|AREP01000002.1| 168036 167494 -3 - 543 PROBABLE TRANSMEMBRANE PROTEIN - none -
fig|6666666.65908.peg.1980 CDS gi|480984045|gb|AREP01000002.1| 168139 169440 1 + 1302 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65908.peg.1981 CDS gi|480984045|gb|AREP01000002.1| 169433 169993 2 + 561 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.65908.peg.1982 CDS gi|480984045|gb|AREP01000002.1| 170036 171169 2 + 1134 Mrp protein homolog - none -
fig|6666666.65908.peg.1983 CDS gi|480984045|gb|AREP01000002.1| 171671 171177 -2 - 495 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65908.peg.1984 CDS gi|480984045|gb|AREP01000002.1| 172081 171689 -1 - 393 hypothetical protein - none -
fig|6666666.65908.peg.1985 CDS gi|480984045|gb|AREP01000002.1| 172762 172124 -1 - 639 putative RNA polymerase sigma factor - none -
fig|6666666.65908.peg.1986 CDS gi|480984045|gb|AREP01000002.1| 172883 173530 2 + 648 FIG00945644: hypothetical protein - none -
fig|6666666.65908.peg.1987 CDS gi|480984045|gb|AREP01000002.1| 174829 173612 -1 - 1218 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65908.peg.1988 CDS gi|480984045|gb|AREP01000002.1| 175086 176225 3 + 1140 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.65908.peg.1989 CDS gi|480984045|gb|AREP01000002.1| 176255 177643 2 + 1389 levanase/invertase - none -
fig|6666666.65908.peg.1990 CDS gi|480984045|gb|AREP01000002.1| 178525 177653 -1 - 873 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.65908.peg.1991 CDS gi|480984045|gb|AREP01000002.1| 178750 178583 -1 - 168 FIG00545868: hypothetical protein - none -
fig|6666666.65908.peg.1992 CDS gi|480984045|gb|AREP01000002.1| 179089 178793 -1 - 297 FIG00545506: hypothetical protein - none -
fig|6666666.65908.peg.1993 CDS gi|480984045|gb|AREP01000002.1| 179865 179095 -3 - 771 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.65908.peg.1994 CDS gi|480984045|gb|AREP01000002.1| 180704 179862 -2 - 843 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.65908.peg.1995 CDS gi|480984045|gb|AREP01000002.1| 181519 180710 -1 - 810 FIG00543965: hypothetical protein - none -
fig|6666666.65908.peg.1996 CDS gi|480984045|gb|AREP01000002.1| 181720 182643 1 + 924 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.1997 CDS gi|480984045|gb|AREP01000002.1| 182726 184153 2 + 1428 Phenylalanine-specific permease - none -
fig|6666666.65908.peg.1998 CDS gi|480984045|gb|AREP01000002.1| 184249 185628 1 + 1380 Phenylalanine-specific permease - none -
fig|6666666.65908.peg.1999 CDS gi|480984045|gb|AREP01000002.1| 185632 186573 1 + 942 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.2000 CDS gi|480984045|gb|AREP01000002.1| 188069 186786 -2 - 1284 PE_PGRS family protein - none -
fig|6666666.65908.peg.2001 CDS gi|480984045|gb|AREP01000002.1| 188875 188234 -1 - 642 FIG00544080: hypothetical protein - none -
fig|6666666.65908.peg.2002 CDS gi|480984045|gb|AREP01000002.1| 189727 189275 -1 - 453 Similar to ribosomal large subunit pseudouridine synthase D, type RluD4 RNA pseudouridine syntheses
fig|6666666.65908.peg.2003 CDS gi|480984045|gb|AREP01000002.1| 190886 189774 -2 - 1113 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.2004 CDS gi|480984045|gb|AREP01000002.1| 191144 190887 -2 - 258 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.65908.peg.2005 CDS gi|480984045|gb|AREP01000002.1| 191666 191280 -2 - 387 hypothetical membrane protein - none -
fig|6666666.65908.peg.2006 CDS gi|480984045|gb|AREP01000002.1| 192557 191670 -2 - 888 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65908.peg.2007 CDS gi|480984045|gb|AREP01000002.1| 194215 192554 -1 - 1662 LpqW - none -
fig|6666666.65908.peg.2008 CDS gi|480984045|gb|AREP01000002.1| 195390 194212 -3 - 1179 Membrane protein mosC - none -
fig|6666666.65908.peg.2009 CDS gi|480984045|gb|AREP01000002.1| 197375 195462 -2 - 1914 GTP-binding protein TypA/BipA - none -
fig|6666666.65908.peg.2010 CDS gi|480984045|gb|AREP01000002.1| 197703 198422 3 + 720 FIG00544264: hypothetical protein - none -
fig|6666666.65908.peg.2011 CDS gi|480984045|gb|AREP01000002.1| 198442 198978 1 + 537 FIG00544603: hypothetical protein - none -
fig|6666666.65908.peg.2012 CDS gi|480984045|gb|AREP01000002.1| 199003 199344 1 + 342 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Transcription repair cluster
fig|6666666.65908.peg.2013 CDS gi|480984045|gb|AREP01000002.1| 201070 199328 -1 - 1743 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.2014 CDS gi|480984045|gb|AREP01000002.1| 202053 201067 -3 - 987 ABC-type transporter, permease component - none -
fig|6666666.65908.peg.2015 CDS gi|480984045|gb|AREP01000002.1| 202972 202046 -1 - 927 ABC-type transporter, permease component - none -
fig|6666666.65908.peg.2016 CDS gi|480984045|gb|AREP01000002.1| 204619 203024 -1 - 1596 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.65908.peg.2017 CDS gi|480984045|gb|AREP01000002.1| 205303 204821 -1 - 483 FIG00546937: hypothetical protein - none -
fig|6666666.65908.peg.2018 CDS gi|480984045|gb|AREP01000002.1| 206061 205300 -3 - 762 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65908.peg.2019 CDS gi|480984045|gb|AREP01000002.1| 207299 206058 -2 - 1242 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.65908.peg.2020 CDS gi|480984045|gb|AREP01000002.1| 207961 207380 -1 - 582 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65908.peg.2021 CDS gi|480984045|gb|AREP01000002.1| 208498 208139 -1 - 360 hypothetical protein - none -
fig|6666666.65908.peg.2022 CDS gi|480984045|gb|AREP01000002.1| 209391 208510 -3 - 882 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.65908.peg.2023 CDS gi|480984045|gb|AREP01000002.1| 209500 210543 1 + 1044 Membrane protein, putative - none -
fig|6666666.65908.peg.2024 CDS gi|480984045|gb|AREP01000002.1| 211374 210565 -3 - 810 Metal transporter, ZIP family - none -
fig|6666666.65908.peg.2025 CDS gi|480984045|gb|AREP01000002.1| 211533 211378 -3 - 156 hypothetical protein - none -
fig|6666666.65908.peg.2026 CDS gi|480984045|gb|AREP01000002.1| 211727 212833 2 + 1107 hypothetical protein - none -
fig|6666666.65908.peg.2027 CDS gi|480984045|gb|AREP01000002.1| 212884 214056 1 + 1173 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65908.peg.2028 CDS gi|480984045|gb|AREP01000002.1| 214181 215197 2 + 1017 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.65908.peg.2029 CDS gi|480984045|gb|AREP01000002.1| 216763 215201 -1 - 1563 hypothetical protein - none -
fig|6666666.65908.peg.2030 CDS gi|480984045|gb|AREP01000002.1| 217646 216789 -2 - 858 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65908.peg.2031 CDS gi|480984045|gb|AREP01000002.1| 217821 217973 3 + 153 hypothetical protein - none -
fig|6666666.65908.peg.2032 CDS gi|480984045|gb|AREP01000002.1| 218668 217970 -1 - 699 hypothetical protein - none -
fig|6666666.65908.peg.2033 CDS gi|480984045|gb|AREP01000002.1| 218721 219134 3 + 414 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.65908.peg.2034 CDS gi|480984045|gb|AREP01000002.1| 219835 219131 -1 - 705 FIG00549881: hypothetical protein - none -
fig|6666666.65908.peg.2035 CDS gi|480984045|gb|AREP01000002.1| 220446 219838 -3 - 609 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.65908.peg.2036 CDS gi|480984045|gb|AREP01000002.1| 220491 221888 3 + 1398 Magnesium chelatase, subunit ChlI (EC 6.6.1.1) CBSS-336982.3.peg.1011
fig|6666666.65908.peg.2037 CDS gi|480984045|gb|AREP01000002.1| 222010 223839 1 + 1830 FIG019045: long form Mg-chelase associated protein with vWA domain CBSS-336982.3.peg.1011
fig|6666666.65908.peg.2038 CDS gi|480984045|gb|AREP01000002.1| 223833 224630 3 + 798 Spermidine synthase-like protein - none -
fig|6666666.65908.peg.2039 CDS gi|480984045|gb|AREP01000002.1| 225133 224639 -1 - 495 hypothetical protein - none -
fig|6666666.65908.peg.2040 CDS gi|480984045|gb|AREP01000002.1| 225775 225143 -1 - 633 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65908.peg.2041 CDS gi|480984045|gb|AREP01000002.1| 226892 225807 -2 - 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65908.peg.2042 CDS gi|480984045|gb|AREP01000002.1| 226950 228404 3 + 1455 FIG00546199: hypothetical protein - none -
fig|6666666.65908.peg.2043 CDS gi|480984045|gb|AREP01000002.1| 228434 229528 2 + 1095 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.65908.peg.2044 CDS gi|480984045|gb|AREP01000002.1| 229661 230257 2 + 597 hypothetical membrane protein - none -
fig|6666666.65908.peg.2045 CDS gi|480984045|gb|AREP01000002.1| 231211 230261 -1 - 951 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65908.peg.2046 CDS gi|480984045|gb|AREP01000002.1| 231319 232587 1 + 1269 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65908.peg.2047 CDS gi|480984045|gb|AREP01000002.1| 232617 232898 3 + 282 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65908.peg.2048 CDS gi|480984045|gb|AREP01000002.1| 233476 232895 -1 - 582 hypothetical protein - none -
fig|6666666.65908.peg.2049 CDS gi|480984045|gb|AREP01000002.1| 233723 234733 2 + 1011 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65908.peg.2050 CDS gi|480984045|gb|AREP01000002.1| 234794 236194 2 + 1401 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65908.peg.2051 CDS gi|480984045|gb|AREP01000002.1| 236259 236795 3 + 537 hypothetical protein - none -
fig|6666666.65908.peg.2052 CDS gi|480984045|gb|AREP01000002.1| 237497 236763 -2 - 735 hypothetical protein - none -
fig|6666666.65908.peg.2053 CDS gi|480984048|gb|AREP01000001.1| 171 1067 3 + 897 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65908.peg.2054 CDS gi|480984048|gb|AREP01000001.1| 1723 1064 -1 - 660 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.65908.peg.2055 CDS gi|480984048|gb|AREP01000001.1| 2535 1723 -3 - 813 putative SimX4 homolog - none -
fig|6666666.65908.peg.2056 CDS gi|480984048|gb|AREP01000001.1| 3839 2538 -2 - 1302 putative DNA-damage-inducible protein F - none -
fig|6666666.65908.peg.2057 CDS gi|480984048|gb|AREP01000001.1| 4798 3836 -1 - 963 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.65908.peg.2058 CDS gi|480984048|gb|AREP01000001.1| 5238 4798 -3 - 441 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65908.peg.2059 CDS gi|480984048|gb|AREP01000001.1| 8219 5391 -2 - 2829 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65908.peg.2060 CDS gi|480984048|gb|AREP01000001.1| 9775 8774 -1 - 1002 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65908.peg.2061 CDS gi|480984048|gb|AREP01000001.1| 10341 9772 -3 - 570 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65908.peg.2062 CDS gi|480984048|gb|AREP01000001.1| 10473 11219 3 + 747 hypothetical protein - none -
fig|6666666.65908.peg.2063 CDS gi|480984048|gb|AREP01000001.1| 11258 13177 2 + 1920 Putative membrane protein - none -
fig|6666666.65908.peg.2064 CDS gi|480984048|gb|AREP01000001.1| 13470 14621 3 + 1152 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65908.peg.2065 CDS gi|480984048|gb|AREP01000001.1| 14664 16100 3 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.2066 CDS gi|480984048|gb|AREP01000001.1| 18203 16452 -2 - 1752 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65908.peg.2067 CDS gi|480984048|gb|AREP01000001.1| 18235 18963 1 + 729 UPF0246 protein YaaA - none -
fig|6666666.65908.peg.2068 CDS gi|480984048|gb|AREP01000001.1| 20167 18953 -1 - 1215 membrane transport protein - none -
fig|6666666.65908.peg.2069 CDS gi|480984048|gb|AREP01000001.1| 20439 20302 -3 - 138 hypothetical protein - none -
fig|6666666.65908.peg.2070 CDS gi|480984048|gb|AREP01000001.1| 20697 20551 -3 - 147 hypothetical protein - none -
fig|6666666.65908.peg.2071 CDS gi|480984048|gb|AREP01000001.1| 20979 22130 3 + 1152 hypothetical protein - none -
fig|6666666.65908.peg.2072 CDS gi|480984048|gb|AREP01000001.1| 23445 22132 -3 - 1314 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.65908.peg.2073 CDS gi|480984048|gb|AREP01000001.1| 24002 23445 -2 - 558 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism
fig|6666666.65908.peg.2074 CDS gi|480984048|gb|AREP01000001.1| 25038 24004 -3 - 1035 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.65908.peg.2075 CDS gi|480984048|gb|AREP01000001.1| 26210 25233 -2 - 978 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) ## SSU rRNA m2G1207 RNA methylation
fig|6666666.65908.peg.2076 CDS gi|480984048|gb|AREP01000001.1| 26934 26197 -3 - 738 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.65908.peg.2077 CDS gi|480984048|gb|AREP01000001.1| 26960 28147 2 + 1188 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.65908.peg.2078 CDS gi|480984048|gb|AREP01000001.1| 28869 28144 -3 - 726 hypothetical protein - none -
fig|6666666.65908.peg.2079 CDS gi|480984048|gb|AREP01000001.1| 30438 28939 -3 - 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65908.peg.2080 CDS gi|480984048|gb|AREP01000001.1| 30406 30642 1 + 237 hypothetical protein - none -
fig|6666666.65908.peg.2081 CDS gi|480984048|gb|AREP01000001.1| 30695 31696 2 + 1002 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65908.peg.2082 CDS gi|480984048|gb|AREP01000001.1| 31795 33210 1 + 1416 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65908.peg.2083 CDS gi|480984048|gb|AREP01000001.1| 33470 33943 2 + 474 FIG00544201: hypothetical protein - none -
fig|6666666.65908.peg.2084 CDS gi|480984048|gb|AREP01000001.1| 34002 34406 3 + 405 hypothetical protein - none -
fig|6666666.65908.peg.2085 CDS gi|480984048|gb|AREP01000001.1| 35366 34470 -2 - 897 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65908.peg.2086 CDS gi|480984048|gb|AREP01000001.1| 37176 35392 -3 - 1785 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.2087 CDS gi|480984048|gb|AREP01000001.1| 38431 37268 -1 - 1164 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65908.peg.2088 CDS gi|480984048|gb|AREP01000001.1| 39707 38496 -2 - 1212 Membrane-associated zinc metalloprotease - none -
fig|6666666.65908.peg.2089 CDS gi|480984048|gb|AREP01000001.1| 40892 39723 -2 - 1170 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65908.peg.2090 CDS gi|480984048|gb|AREP01000001.1| 41047 41547 1 + 501 hypothetical membrane protein - none -
fig|6666666.65908.peg.2091 CDS gi|480984048|gb|AREP01000001.1| 42713 41607 -2 - 1107 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.65908.peg.2092 CDS gi|480984048|gb|AREP01000001.1| 42810 43226 3 + 417 FIG00544474: hypothetical protein - none -
fig|6666666.65908.peg.2093 CDS gi|480984048|gb|AREP01000001.1| 44170 43223 -1 - 948 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.2094 CDS gi|480984048|gb|AREP01000001.1| 44734 44177 -1 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65908.peg.2095 CDS gi|480984048|gb|AREP01000001.1| 46685 44811 -2 - 1875 Lipopolysaccharide modification acyltransferase - none -
fig|6666666.65908.peg.2096 CDS gi|480984048|gb|AREP01000001.1| 46911 46798 -3 - 114 hypothetical protein - none -
fig|6666666.65908.peg.2097 CDS gi|480984048|gb|AREP01000001.1| 46868 47875 2 + 1008 putative amidase - none -
fig|6666666.65908.peg.2098 CDS gi|480984048|gb|AREP01000001.1| 48600 47872 -3 - 729 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65908.peg.2099 CDS gi|480984048|gb|AREP01000001.1| 49559 48732 -2 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65908.peg.2100 CDS gi|480984048|gb|AREP01000001.1| 50581 49748 -1 - 834 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.65908.peg.2101 CDS gi|480984048|gb|AREP01000001.1| 50901 51401 3 + 501 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.65908.peg.2102 CDS gi|480984048|gb|AREP01000001.1| 52254 51364 -3 - 891 Tyrosine recombinase XerC - none -
fig|6666666.65908.peg.2103 CDS gi|480984048|gb|AREP01000001.1| 53427 52264 -3 - 1164 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65908.peg.2104 CDS gi|480984048|gb|AREP01000001.1| 54887 53424 -2 - 1464 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65908.peg.2105 CDS gi|480984048|gb|AREP01000001.1| 55290 54928 -3 - 363 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.65908.peg.2106 CDS gi|480984048|gb|AREP01000001.1| 55746 55438 -3 - 309 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65908.peg.2107 CDS gi|480984048|gb|AREP01000001.1| 56392 55736 -1 - 657 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.65908.peg.2108 CDS gi|480984048|gb|AREP01000001.1| 57149 56394 -2 - 756 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65908.peg.2109 CDS gi|480984048|gb|AREP01000001.1| 57592 57245 -1 - 348 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65908.peg.2110 CDS gi|480984048|gb|AREP01000001.1| 59974 57710 -1 - 2265 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65908.peg.2111 CDS gi|480984048|gb|AREP01000001.1| 61197 59992 -3 - 1206 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.65908.peg.2112 CDS gi|480984048|gb|AREP01000001.1| 61229 61837 2 + 609 hypothetical protein - none -
fig|6666666.65908.peg.2113 CDS gi|480984048|gb|AREP01000001.1| 62331 61834 -3 - 498 16S rRNA processing protein RimM - none -
fig|6666666.65908.peg.2114 CDS gi|480984048|gb|AREP01000001.1| 62930 62412 -2 - 519 Putative Nudix hydrolase YfcD (EC 3.6.-.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65908.peg.2115 CDS gi|480984048|gb|AREP01000001.1| 63483 62983 -3 - 501 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.65908.peg.2116 CDS gi|480984048|gb|AREP01000001.1| 63801 65837 3 + 2037 O-antigen acetylase - none -
fig|6666666.65908.peg.2117 CDS gi|480984048|gb|AREP01000001.1| 66024 66164 3 + 141 hypothetical protein - none -
fig|6666666.65908.peg.2118 CDS gi|480984048|gb|AREP01000001.1| 68064 66451 -3 - 1614 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65908.peg.2119 CDS gi|480984048|gb|AREP01000001.1| 69744 68158 -3 - 1587 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65908.peg.2120 CDS gi|480984048|gb|AREP01000001.1| 70291 71244 1 + 954 hypothetical protein - none -
fig|6666666.65908.peg.2121 CDS gi|480984048|gb|AREP01000001.1| 74633 71241 -2 - 3393 Chromosome partition protein smc - none -
fig|6666666.65908.peg.2122 CDS gi|480984048|gb|AREP01000001.1| 74981 74700 -2 - 282 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.2123 CDS gi|480984048|gb|AREP01000001.1| 76450 74987 -1 - 1464 amino acid carrier protein - none -
fig|6666666.65908.peg.2124 CDS gi|480984048|gb|AREP01000001.1| 77308 76484 -1 - 825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65908.peg.2125 CDS gi|480984048|gb|AREP01000001.1| 78071 77301 -2 - 771 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65908.peg.2126 CDS gi|480984048|gb|AREP01000001.1| 78601 78068 -1 - 534 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65908.peg.2127 CDS gi|480984048|gb|AREP01000001.1| 79370 78612 -2 - 759 Cell division initiation protein - none -
fig|6666666.65908.peg.2128 CDS gi|480984048|gb|AREP01000001.1| 80770 79424 -1 - 1347 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65908.peg.2129 CDS gi|480984048|gb|AREP01000001.1| 80864 82009 2 + 1146 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.65908.peg.2130 CDS gi|480984048|gb|AREP01000001.1| 82380 81979 -3 - 402 FIG00544156: hypothetical protein - none -
fig|6666666.65908.peg.2131 CDS gi|480984048|gb|AREP01000001.1| 82411 83754 1 + 1344 No significant database matches - none -
fig|6666666.65908.peg.2132 CDS gi|480984048|gb|AREP01000001.1| 83809 85065 1 + 1257 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65908.peg.2133 CDS gi|480984048|gb|AREP01000001.1| 85153 87540 1 + 2388 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.2134 CDS gi|480984048|gb|AREP01000001.1| 88411 87620 -1 - 792 Iron (III) ABC transporter, ATP-binding protein - none -
fig|6666666.65908.peg.2135 CDS gi|480984048|gb|AREP01000001.1| 89180 88857 -2 - 324 hypothetical protein - none -
fig|6666666.65908.peg.2136 CDS gi|480984048|gb|AREP01000001.1| 90257 89673 -2 - 585 Iron(III) dicitrate transport ATP-binding protein - none -
fig|6666666.65908.peg.2137 CDS gi|480984048|gb|AREP01000001.1| 91570 90434 -1 - 1137 Iron(III) dicitrate transport system permease protein - none -
fig|6666666.65908.peg.2138 CDS gi|480984048|gb|AREP01000001.1| 92742 91570 -3 - 1173 Iron (III) ABC transporter, ATP-binding protein - none -
fig|6666666.65908.peg.2139 CDS gi|480984048|gb|AREP01000001.1| 94331 92901 -2 - 1431 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65908.peg.2140 CDS gi|480984048|gb|AREP01000001.1| 95288 94404 -2 - 885 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65908.peg.2141 CDS gi|480984048|gb|AREP01000001.1| 96128 95313 -2 - 816 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65908.peg.2142 CDS gi|480984048|gb|AREP01000001.1| 96844 96242 -1 - 603 FIG00545012: hypothetical protein - none -
fig|6666666.65908.peg.2143 CDS gi|480984048|gb|AREP01000001.1| 97273 96917 -1 - 357 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis
fig|6666666.65908.peg.2144 CDS gi|480984048|gb|AREP01000001.1| 98046 97270 -3 - 777 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.65908.peg.2145 CDS gi|480984048|gb|AREP01000001.1| 98846 98058 -2 - 789 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65908.peg.2146 CDS gi|480984048|gb|AREP01000001.1| 99599 98865 -2 - 735 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.65908.peg.2147 CDS gi|480984048|gb|AREP01000001.1| 100254 99610 -3 - 645 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.65908.peg.2148 CDS gi|480984048|gb|AREP01000001.1| 101537 100260 -2 - 1278 putative transport protein - none -
fig|6666666.65908.peg.2149 CDS gi|480984048|gb|AREP01000001.1| 101824 101618 -1 - 207 hypothetical protein - none -
fig|6666666.65908.peg.2150 CDS gi|480984048|gb|AREP01000001.1| 102427 101825 -1 - 603 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.65908.peg.2151 CDS gi|480984048|gb|AREP01000001.1| 103527 102430 -3 - 1098 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.65908.peg.2152 CDS gi|480984048|gb|AREP01000001.1| 104837 103527 -2 - 1311 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.65908.peg.2153 CDS gi|480984048|gb|AREP01000001.1| 104930 105961 2 + 1032 hypothetical protein - none -
fig|6666666.65908.peg.2154 CDS gi|480984048|gb|AREP01000001.1| 106409 105939 -2 - 471 hypothetical membrane protein - none -
fig|6666666.65908.peg.2155 CDS gi|480984048|gb|AREP01000001.1| 107219 106521 -2 - 699 hypothetical protein - none -
fig|6666666.65908.peg.2156 CDS gi|480984048|gb|AREP01000001.1| 107573 109855 2 + 2283 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65908.peg.2157 CDS gi|480984048|gb|AREP01000001.1| 109941 111311 3 + 1371 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65908.peg.2158 CDS gi|480984048|gb|AREP01000001.1| 111399 111953 3 + 555 hypothetical protein - none -
fig|6666666.65908.peg.2159 CDS gi|480984048|gb|AREP01000001.1| 112024 114552 1 + 2529 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65908.peg.2160 CDS gi|480984048|gb|AREP01000001.1| 114559 115572 1 + 1014 FIG00544169: hypothetical protein - none -
fig|6666666.65908.peg.2161 CDS gi|480984048|gb|AREP01000001.1| 115952 115569 -2 - 384 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65908.peg.2162 CDS gi|480984048|gb|AREP01000001.1| 116183 115956 -2 - 228 FIG00544856: hypothetical protein - none -
fig|6666666.65908.peg.2163 CDS gi|480984048|gb|AREP01000001.1| 116845 116195 -1 - 651 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.65908.peg.2164 CDS gi|480984048|gb|AREP01000001.1| 116876 118615 2 + 1740 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) Trehalose Biosynthesis
fig|6666666.65908.peg.2165 CDS gi|480984048|gb|AREP01000001.1| 119883 118612 -3 - 1272 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65908.peg.2166 CDS gi|480984048|gb|AREP01000001.1| 120033 120650 3 + 618 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.65908.peg.2167 CDS gi|480984048|gb|AREP01000001.1| 120652 121935 1 + 1284 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.65908.peg.2168 CDS gi|480984048|gb|AREP01000001.1| 122086 122523 1 + 438 hypothetical protein - none -
fig|6666666.65908.peg.2169 CDS gi|480984048|gb|AREP01000001.1| 123815 122607 -2 - 1209 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.65908.peg.2170 CDS gi|480984048|gb|AREP01000001.1| 125164 123956 -1 - 1209 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.65908.peg.2171 CDS gi|480984048|gb|AREP01000001.1| 128875 125315 -1 - 3561 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65908.peg.2172 CDS gi|480984048|gb|AREP01000001.1| 130211 128898 -2 - 1314 hypothetical protein - none -
fig|6666666.65908.peg.2173 CDS gi|480984048|gb|AREP01000001.1| 130259 131128 2 + 870 Protein rarD - none -
fig|6666666.65908.peg.2174 CDS gi|480984048|gb|AREP01000001.1| 131684 131115 -2 - 570 hypothetical protein - none -
fig|6666666.65908.peg.2175 CDS gi|480984048|gb|AREP01000001.1| 132607 131681 -1 - 927 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65908.peg.2176 CDS gi|480984048|gb|AREP01000001.1| 133155 132604 -3 - 552 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65908.peg.2177 CDS gi|480984048|gb|AREP01000001.1| 133211 134149 2 + 939 hypothetical protein - none -
fig|6666666.65908.peg.2178 CDS gi|480984048|gb|AREP01000001.1| 134209 135903 1 + 1695 putative ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.2179 CDS gi|480984048|gb|AREP01000001.1| 136563 135904 -3 - 660 Putative secreted protein - none -
fig|6666666.65908.peg.2180 CDS gi|480984048|gb|AREP01000001.1| 136685 137596 2 + 912 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65908.peg.2181 CDS gi|480984048|gb|AREP01000001.1| 138993 137629 -3 - 1365 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65908.peg.2182 CDS gi|480984048|gb|AREP01000001.1| 139868 139038 -2 - 831 putative integral membrane protein - none -
fig|6666666.65908.peg.2183 CDS gi|480984048|gb|AREP01000001.1| 143058 139870 -3 - 3189 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65908.peg.2184 CDS gi|480984048|gb|AREP01000001.1| 144395 143361 -2 - 1035 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.65908.peg.2185 CDS gi|480984048|gb|AREP01000001.1| 144842 144603 -2 - 240 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65908.peg.2186 CDS gi|480984048|gb|AREP01000001.1| 145503 145024 -3 - 480 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65908.peg.2187 CDS gi|480984048|gb|AREP01000001.1| 146298 145576 -3 - 723 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65908.peg.2188 CDS gi|480984048|gb|AREP01000001.1| 147030 146299 -3 - 732 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65908.peg.2189 CDS gi|480984048|gb|AREP01000001.1| 148317 147079 -3 - 1239 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65908.peg.2190 CDS gi|480984048|gb|AREP01000001.1| 149176 148487 -1 - 690 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65908.peg.2191 CDS gi|480984048|gb|AREP01000001.1| 150674 149187 -2 - 1488 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65908.peg.2192 CDS gi|480984048|gb|AREP01000001.1| 151765 150692 -1 - 1074 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65908.peg.2193 CDS gi|480984048|gb|AREP01000001.1| 153248 151785 -2 - 1464 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65908.peg.2194 CDS gi|480984048|gb|AREP01000001.1| 154672 153251 -1 - 1422 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65908.peg.2195 CDS gi|480984048|gb|AREP01000001.1| 155779 154673 -1 - 1107 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65908.peg.2196 CDS gi|480984048|gb|AREP01000001.1| 157348 155786 -1 - 1563 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65908.peg.2197 CDS gi|480984048|gb|AREP01000001.1| 158949 157405 -3 - 1545 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65908.peg.2198 CDS gi|480984048|gb|AREP01000001.1| 160905 158971 -3 - 1935 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.2199 CDS gi|480984048|gb|AREP01000001.1| 161596 161000 -1 - 597 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.65908.peg.2200 CDS gi|480984048|gb|AREP01000001.1| 162848 161853 -2 - 996 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65908.peg.2201 CDS gi|480984048|gb|AREP01000001.1| 163451 163017 -2 - 435 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65908.peg.2202 CDS gi|480984048|gb|AREP01000001.1| 164414 164016 -2 - 399 FIG017342: transmembrane protein - none -
fig|6666666.65908.peg.2203 CDS gi|480984048|gb|AREP01000001.1| 164826 164533 -3 - 294 hypothetical protein - none -
fig|6666666.65908.peg.2204 CDS gi|480984048|gb|AREP01000001.1| 165154 165720 1 + 567 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65908.peg.2205 CDS gi|480984048|gb|AREP01000001.1| 165778 166881 1 + 1104 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.65908.peg.2206 CDS gi|480984048|gb|AREP01000001.1| 166884 168395 3 + 1512 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65908.peg.2207 CDS gi|480984048|gb|AREP01000001.1| 168726 168367 -3 - 360 Conserved hypothetical regulatory protein - none -
fig|6666666.65908.peg.2208 CDS gi|480984048|gb|AREP01000001.1| 168807 171023 3 + 2217 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65908.peg.2209 CDS gi|480984048|gb|AREP01000001.1| 172436 171078 -2 - 1359 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65908.peg.2210 CDS gi|480984048|gb|AREP01000001.1| 173056 172532 -1 - 525 FIG00544385: hypothetical protein - none -
fig|6666666.65908.peg.2211 CDS gi|480984048|gb|AREP01000001.1| 173292 173080 -3 - 213 hypothetical protein - none -
fig|6666666.65908.peg.2212 CDS gi|480984048|gb|AREP01000001.1| 174459 173299 -3 - 1161 hypothetical membrane protein - none -
fig|6666666.65908.peg.2213 CDS gi|480984048|gb|AREP01000001.1| 175323 174589 -3 - 735 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.2214 CDS gi|480984048|gb|AREP01000001.1| 176306 175335 -2 - 972 ROK family protein (putative glucokinase) - none -
fig|6666666.65908.peg.2215 CDS gi|480984048|gb|AREP01000001.1| 177465 176350 -3 - 1116 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.65908.peg.2216 CDS gi|480984048|gb|AREP01000001.1| 178524 177478 -3 - 1047 NLP/P60 family protein - none -
fig|6666666.65908.peg.2217 CDS gi|480984048|gb|AREP01000001.1| 179576 178833 -2 - 744 putative secreted protein - none -
fig|6666666.65908.peg.2218 CDS gi|480984048|gb|AREP01000001.1| 180302 181660 2 + 1359 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) - none -
fig|6666666.65908.peg.2219 CDS gi|480984048|gb|AREP01000001.1| 181681 183171 1 + 1491 2-oxoglutarate/malate translocator - none -
fig|6666666.65908.peg.2220 CDS gi|480984048|gb|AREP01000001.1| 183218 184168 2 + 951 hypothetical protein - none -
fig|6666666.65908.peg.2221 CDS gi|480984048|gb|AREP01000001.1| 185912 184293 -2 - 1620 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65908.peg.2222 CDS gi|480984048|gb|AREP01000001.1| 187135 185912 -1 - 1224 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65908.peg.2223 CDS gi|480984048|gb|AREP01000001.1| 187977 187132 -3 - 846 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65908.peg.2224 CDS gi|480984048|gb|AREP01000001.1| 188694 188029 -3 - 666 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65908.peg.2225 CDS gi|480984048|gb|AREP01000001.1| 189552 189121 -3 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.65908.peg.2226 CDS gi|480984048|gb|AREP01000001.1| 190667 189573 -2 - 1095 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65908.peg.2227 CDS gi|480984048|gb|AREP01000001.1| 191214 193124 3 + 1911 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65908.peg.2228 CDS gi|480984048|gb|AREP01000001.1| 193822 193121 -1 - 702 hypothetical protein - none -
fig|6666666.65908.peg.2229 CDS gi|480984048|gb|AREP01000001.1| 194269 193925 -1 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65908.peg.2230 CDS gi|480984048|gb|AREP01000001.1| 194495 195169 2 + 675 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65908.peg.2231 CDS gi|480984048|gb|AREP01000001.1| 195221 196225 2 + 1005 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.65908.peg.2232 CDS gi|480984048|gb|AREP01000001.1| 197418 196303 -3 - 1116 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65908.peg.2233 CDS gi|480984048|gb|AREP01000001.1| 197500 198969 1 + 1470 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65908.peg.2234 CDS gi|480984048|gb|AREP01000001.1| 199366 198974 -1 - 393 Putative oxidoreductase - none -
fig|6666666.65908.peg.2235 CDS gi|480984048|gb|AREP01000001.1| 199505 201646 2 + 2142 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.65908.peg.2236 CDS gi|480984048|gb|AREP01000001.1| 201795 204659 3 + 2865 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65908.peg.2237 CDS gi|480984048|gb|AREP01000001.1| 204668 205738 2 + 1071 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65908.peg.2238 CDS gi|480984048|gb|AREP01000001.1| 205743 206132 3 + 390 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65908.peg.2239 CDS gi|480984048|gb|AREP01000001.1| 206144 206935 2 + 792 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65908.peg.2240 CDS gi|480984048|gb|AREP01000001.1| 206972 208030 2 + 1059 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65908.peg.2241 CDS gi|480984048|gb|AREP01000001.1| 208107 208895 3 + 789 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65908.peg.2242 CDS gi|480984048|gb|AREP01000001.1| 210746 209157 -2 - 1590 FIG00355849: hypothetical protein - none -
fig|6666666.65908.peg.2243 CDS gi|480984048|gb|AREP01000001.1| 211273 210797 -1 - 477 FIG00543905: hypothetical protein - none -
fig|6666666.65908.peg.2244 CDS gi|480984048|gb|AREP01000001.1| 211413 212849 3 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.2245 CDS gi|480984048|gb|AREP01000001.1| 214370 213942 -2 - 429 FIG00543983: hypothetical protein - none -
fig|6666666.65908.peg.2246 CDS gi|480984048|gb|AREP01000001.1| 214665 214528 -3 - 138 hypothetical protein - none -
fig|6666666.65908.peg.2247 CDS gi|480984048|gb|AREP01000001.1| 214648 215025 1 + 378 hypothetical protein - none -
fig|6666666.65908.peg.2248 CDS gi|480984048|gb|AREP01000001.1| 215025 215921 3 + 897 hypothetical protein - none -
fig|6666666.65908.peg.2249 CDS gi|480984048|gb|AREP01000001.1| 216638 215928 -2 - 711 hypothetical protein - none -
fig|6666666.65908.peg.2250 CDS gi|480984048|gb|AREP01000001.1| 217184 216657 -2 - 528 hypothetical protein - none -
fig|6666666.65908.peg.2251 CDS gi|480984048|gb|AREP01000001.1| 217351 218031 1 + 681 hypothetical protein - none -
fig|6666666.65908.peg.2252 CDS gi|480984048|gb|AREP01000001.1| 219139 218258 -1 - 882 No significant database matches - none -
fig|6666666.65908.peg.2253 CDS gi|480984048|gb|AREP01000001.1| 219345 219211 -3 - 135 hypothetical protein - none -
fig|6666666.65908.peg.2254 CDS gi|480984048|gb|AREP01000001.1| 220822 219377 -1 - 1446 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65908.peg.2255 CDS gi|480984048|gb|AREP01000001.1| 220903 222276 1 + 1374 FIG00545265: hypothetical protein - none -
fig|6666666.65908.peg.2256 CDS gi|480984048|gb|AREP01000001.1| 222583 222293 -1 - 291 hypothetical protein - none -
fig|6666666.65908.peg.2257 CDS gi|480984048|gb|AREP01000001.1| 225659 222624 -2 - 3036 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) CBSS-316057.3.peg.3521
fig|6666666.65908.peg.2258 CDS gi|480984048|gb|AREP01000001.1| 227001 225673 -3 - 1329 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65908.peg.2259 CDS gi|480984048|gb|AREP01000001.1| 227068 228723 1 + 1656 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65908.peg.2260 CDS gi|480984048|gb|AREP01000001.1| 228969 228763 -3 - 207 FIG00544054: hypothetical protein - none -
fig|6666666.65908.peg.2261 CDS gi|480984048|gb|AREP01000001.1| 229060 230316 1 + 1257 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.65908.peg.2262 CDS gi|480984048|gb|AREP01000001.1| 231707 230313 -2 - 1395 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65908.peg.2263 CDS gi|480984048|gb|AREP01000001.1| 232822 231860 -1 - 963 hypothetical protein - none -
fig|6666666.65908.peg.2264 CDS gi|480984048|gb|AREP01000001.1| 234668 233511 -2 - 1158 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.65908.peg.2265 CDS gi|480984048|gb|AREP01000001.1| 235360 234671 -1 - 690 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.65908.peg.2266 CDS gi|480984048|gb|AREP01000001.1| 236527 235379 -1 - 1149 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.65908.peg.2267 CDS gi|480984048|gb|AREP01000001.1| 236572 237231 1 + 660 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.65908.peg.2268 CDS gi|480984048|gb|AREP01000001.1| 237218 237688 2 + 471 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.65908.peg.2269 CDS gi|480984048|gb|AREP01000001.1| 237704 238693 2 + 990 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65908.peg.2270 CDS gi|480984048|gb|AREP01000001.1| 238709 239515 2 + 807 hypothetical protein - none -
fig|6666666.65908.peg.2271 CDS gi|480984048|gb|AREP01000001.1| 240371 239967 -2 - 405 FIG00544601: hypothetical protein - none -
fig|6666666.65908.peg.2272 CDS gi|480984048|gb|AREP01000001.1| 240613 243345 1 + 2733 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65908.peg.2273 CDS gi|480984048|gb|AREP01000001.1| 244390 243413 -1 - 978 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.65908.peg.2274 CDS gi|480984048|gb|AREP01000001.1| 244428 244736 3 + 309 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65908.peg.2275 CDS gi|480984048|gb|AREP01000001.1| 244756 245601 1 + 846 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.65908.peg.2276 CDS gi|480984048|gb|AREP01000001.1| 245970 245611 -3 - 360 hypothetical protein - none -
fig|6666666.65908.peg.2277 CDS gi|480984048|gb|AREP01000001.1| 246232 247710 1 + 1479 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65908.peg.2278 CDS gi|480984048|gb|AREP01000001.1| 248548 247721 -1 - 828 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65908.peg.2279 CDS gi|480984048|gb|AREP01000001.1| 249499 248579 -1 - 921 hypothetical protein - none -
fig|6666666.65908.peg.2280 CDS gi|480984048|gb|AREP01000001.1| 251092 249617 -1 - 1476 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.65908.peg.2281 CDS gi|480984048|gb|AREP01000001.1| 251214 252503 3 + 1290 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation
fig|6666666.65908.peg.2282 CDS gi|480984048|gb|AREP01000001.1| 252505 253107 1 + 603 hypothetical protein - none -
fig|6666666.65908.peg.2283 CDS gi|480984048|gb|AREP01000001.1| 253353 253210 -3 - 144 hypothetical protein - none -
fig|6666666.65908.peg.2284 CDS gi|480984048|gb|AREP01000001.1| 254060 254176 2 + 117 hypothetical protein - none -
fig|6666666.65908.peg.2285 CDS gi|480984048|gb|AREP01000001.1| 255064 254261 -1 - 804 putative ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.2286 CDS gi|480984048|gb|AREP01000001.1| 256077 255061 -3 - 1017 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.65908.peg.2287 CDS gi|480984048|gb|AREP01000001.1| 257059 256088 -1 - 972 ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65908.peg.2288 CDS gi|480984048|gb|AREP01000001.1| 257788 257168 -1 - 621 peptide/opine/nickel uptake ABC transporter (PepT) family, ATP-binding protein - none -
fig|6666666.65908.peg.2289 CDS gi|480984048|gb|AREP01000001.1| 258498 257785 -3 - 714 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65908.peg.2290 CDS gi|480984048|gb|AREP01000001.1| 259357 258509 -1 - 849 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65908.peg.2291 CDS gi|480984048|gb|AREP01000001.1| 260315 259320 -2 - 996 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65908.peg.2292 CDS gi|480984048|gb|AREP01000001.1| 261988 260351 -1 - 1638 Dipeptide-binding ABC transporter, periplasmic substrate-binding component DppA (TC 3.A.1.5.2) - none -
fig|6666666.65908.peg.2293 CDS gi|480984048|gb|AREP01000001.1| 264183 262159 -3 - 2025 hypothetical protein - none -
fig|6666666.65908.peg.2294 CDS gi|480984048|gb|AREP01000001.1| 266049 264913 -3 - 1137 DNA-binding protein - none -
fig|6666666.65908.peg.2295 CDS gi|480984048|gb|AREP01000001.1| 266802 266233 -3 - 570 putative superinfection immunity protein - none -
fig|6666666.65908.peg.2296 CDS gi|480984048|gb|AREP01000001.1| 268898 266946 -2 - 1953 hypothetical protein - none -
fig|6666666.65908.peg.2297 CDS gi|480984048|gb|AREP01000001.1| 269014 269130 1 + 117 hypothetical protein - none -
fig|6666666.65908.peg.2298 CDS gi|480984048|gb|AREP01000001.1| 270947 270801 -2 - 147 hypothetical protein - none -
fig|6666666.65908.peg.2299 CDS gi|480984048|gb|AREP01000001.1| 271475 271284 -2 - 192 hypothetical protein - none -
fig|6666666.65908.peg.2300 CDS gi|480984048|gb|AREP01000001.1| 272877 274085 3 + 1209 membrane transport protein - none -
fig|6666666.65908.peg.2301 CDS gi|480984048|gb|AREP01000001.1| 275041 274178 -1 - 864 membrane protein, putative - none -
fig|6666666.65908.peg.2302 CDS gi|480984048|gb|AREP01000001.1| 275146 275391 1 + 246 hypothetical protein - none -
fig|6666666.65908.peg.2303 CDS gi|480984048|gb|AREP01000001.1| 276339 275392 -3 - 948 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65908.peg.2304 CDS gi|480984048|gb|AREP01000001.1| 276905 276336 -2 - 570 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65908.peg.2305 CDS gi|480984048|gb|AREP01000001.1| 277543 276935 -1 - 609 Putative membrane protein - none -
fig|6666666.65908.peg.2306 CDS gi|480984048|gb|AREP01000001.1| 277805 278398 2 + 594 hypothetical protein - none -
fig|6666666.65908.peg.2307 CDS gi|480984048|gb|AREP01000001.1| 280066 278789 -1 - 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.65908.peg.2308 CDS gi|480984048|gb|AREP01000001.1| 280929 280186 -3 - 744 FIG00545464: hypothetical protein - none -
fig|6666666.65908.peg.2309 CDS gi|480984048|gb|AREP01000001.1| 281143 281562 1 + 420 hypothetical protein - none -
fig|6666666.65908.peg.2310 CDS gi|480984048|gb|AREP01000001.1| 282227 281610 -2 - 618 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65908.peg.2311 CDS gi|480984048|gb|AREP01000001.1| 282249 283106 3 + 858 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) NAD and NADP cofactor biosynthesis global
fig|6666666.65908.peg.2312 CDS gi|480984048|gb|AREP01000001.1| 284152 283184 -1 - 969 hypothetical protein - none -
fig|6666666.65908.peg.2313 CDS gi|480984048|gb|AREP01000001.1| 286118 284229 -2 - 1890 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65908.peg.2314 CDS gi|480984048|gb|AREP01000001.1| 286173 286592 3 + 420 putative ribonuclease - none -
fig|6666666.65908.peg.2315 CDS gi|480984048|gb|AREP01000001.1| 286585 286836 1 + 252 hypothetical protein - none -
fig|6666666.65908.peg.2316 CDS gi|480984048|gb|AREP01000001.1| 287335 286844 -1 - 492 hypothetical protein - none -
fig|6666666.65908.peg.2317 CDS gi|480984048|gb|AREP01000001.1| 288480 287338 -3 - 1143 DNA-binding protein - none -
fig|6666666.65908.peg.2318 CDS gi|480984048|gb|AREP01000001.1| 289827 288556 -3 - 1272 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65908.peg.2319 CDS gi|480984048|gb|AREP01000001.1| 289901 291925 2 + 2025 FIG00543878: hypothetical protein - none -
fig|6666666.65908.peg.2320 CDS gi|480984048|gb|AREP01000001.1| 292416 291934 -3 - 483 hypothetical protein - none -
fig|6666666.65908.peg.2321 CDS gi|480984048|gb|AREP01000001.1| 292931 292428 -2 - 504 hypothetical protein - none -
fig|6666666.65908.peg.2322 CDS gi|480984048|gb|AREP01000001.1| 294313 292931 -1 - 1383 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65908.peg.2323 CDS gi|480984048|gb|AREP01000001.1| 294365 294676 2 + 312 hypothetical protein - none -
fig|6666666.65908.peg.2324 CDS gi|480984048|gb|AREP01000001.1| 294645 295103 3 + 459 putative transcription regulator - none -
fig|6666666.65908.peg.2325 CDS gi|480984048|gb|AREP01000001.1| 295188 295613 3 + 426 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.65908.peg.2326 CDS gi|480984048|gb|AREP01000001.1| 296670 295606 -3 - 1065 FIG00544679: hypothetical protein - none -
fig|6666666.65908.peg.2327 CDS gi|480984048|gb|AREP01000001.1| 297410 296667 -2 - 744 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65908.peg.2328 CDS gi|480984048|gb|AREP01000001.1| 298151 297414 -2 - 738 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65908.peg.2329 CDS gi|480984048|gb|AREP01000001.1| 299087 298152 -2 - 936 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65908.peg.2330 CDS gi|480984048|gb|AREP01000001.1| 300051 299200 -3 - 852 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65908.peg.2331 CDS gi|480984048|gb|AREP01000001.1| 301576 300239 -1 - 1338 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65908.peg.2332 CDS gi|480984048|gb|AREP01000001.1| 302148 301576 -3 - 573 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65908.peg.2333 CDS gi|480984048|gb|AREP01000001.1| 303146 302145 -2 - 1002 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.65908.peg.2334 CDS gi|480984048|gb|AREP01000001.1| 303873 303166 -3 - 708 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.65908.peg.2335 CDS gi|480984048|gb|AREP01000001.1| 305010 303874 -3 - 1137 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65908.peg.2336 CDS gi|480984048|gb|AREP01000001.1| 306045 305029 -3 - 1017 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65908.peg.2337 CDS gi|480984048|gb|AREP01000001.1| 307204 306083 -1 - 1122 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65908.peg.2338 CDS gi|480984048|gb|AREP01000001.1| 307900 307229 -1 - 672 FIG00543880: hypothetical protein - none -
fig|6666666.65908.peg.2339 CDS gi|480984048|gb|AREP01000001.1| 309855 308011 -3 - 1845 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.65908.peg.2340 CDS gi|480984048|gb|AREP01000001.1| 309996 312140 3 + 2145 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65908.peg.2341 CDS gi|480984048|gb|AREP01000001.1| 312286 312146 -1 - 141 FIG00545202: hypothetical protein - none -
fig|6666666.65908.peg.2342 CDS gi|480984048|gb|AREP01000001.1| 312468 312298 -3 - 171 hypothetical protein - none -
fig|6666666.65908.peg.2343 CDS gi|480984048|gb|AREP01000001.1| 314439 312469 -3 - 1971 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.65908.peg.2344 CDS gi|480984048|gb|AREP01000001.1| 314460 315755 3 + 1296 FIG00547479: hypothetical protein - none -
fig|6666666.65908.peg.2345 CDS gi|480984048|gb|AREP01000001.1| 315815 316939 2 + 1125 uncharacterized protein probably involved in trehalose biosynthesis - none -
fig|6666666.65908.peg.2346 CDS gi|480984048|gb|AREP01000001.1| 317495 316941 -2 - 555 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65908.peg.2347 CDS gi|480984048|gb|AREP01000001.1| 318081 317506 -3 - 576 hypothetical protein - none -
fig|6666666.65908.peg.2348 CDS gi|480984048|gb|AREP01000001.1| 318176 320068 2 + 1893 putative ABC transporter ATP-binding protein - none -
fig|6666666.65908.peg.2349 CDS gi|480984048|gb|AREP01000001.1| 320079 321215 3 + 1137 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.65908.peg.2350 CDS gi|480984048|gb|AREP01000001.1| 321226 322983 1 + 1758 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.65908.peg.2351 CDS gi|480984048|gb|AREP01000001.1| 322983 324071 3 + 1089 uncharacterized protein probably involved in trehalose biosynthesis - none -
fig|6666666.65908.peg.2352 CDS gi|480984048|gb|AREP01000001.1| 324166 325542 1 + 1377 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65908.peg.2353 CDS gi|480984048|gb|AREP01000001.1| 326303 325539 -2 - 765 hypothetical protein - none -
fig|6666666.65908.rna.1 RNA gi|480983955|gb|AREP01000030.1| 262 1 -1 - 262 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65908.rna.2 RNA gi|480983964|gb|AREP01000028.1| 79 200 1 + 122 5S RNA - none -
fig|6666666.65908.rna.3 RNA gi|480983970|gb|AREP01000027.1| 8932 8849 -1 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.65908.rna.4 RNA gi|480983973|gb|AREP01000026.1| 6943 7015 1 + 73 tRNA-Thr-CGT - none -
fig|6666666.65908.rna.5 RNA gi|480983976|gb|AREP01000025.1| 1749 1821 3 + 73 tRNA-Glu-CTC - none -
fig|6666666.65908.rna.6 RNA gi|480983979|gb|AREP01000024.1| 28428 28501 3 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.65908.rna.7 RNA gi|480983982|gb|AREP01000023.1| 56 177 2 + 122 5S RNA - none -
fig|6666666.65908.rna.8 RNA gi|480983985|gb|AREP01000022.1| 17475 17402 -3 - 74 tRNA-Leu-TAA - none -
fig|6666666.65908.rna.9 RNA gi|480983985|gb|AREP01000022.1| 24700 24771 1 + 72 tRNA-Gln-TTG - none -
fig|6666666.65908.rna.10 RNA gi|480983988|gb|AREP01000021.1| 39158 39231 2 + 74 tRNA-Met-CAT - none -
fig|6666666.65908.rna.11 RNA gi|480983990|gb|AREP01000020.1| 38819 38892 2 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.65908.rna.12 RNA gi|480983999|gb|AREP01000017.1| 13967 13896 -2 - 72 tRNA-Val-CAC tRNAs
fig|6666666.65908.rna.13 RNA gi|480983999|gb|AREP01000017.1| 14235 14307 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.65908.rna.14 RNA gi|480983999|gb|AREP01000017.1| 14309 14380 2 + 72 tRNA-Val-GAC tRNAs
fig|6666666.65908.rna.15 RNA gi|480983999|gb|AREP01000017.1| 14422 14494 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.65908.rna.16 RNA gi|480983999|gb|AREP01000017.1| 14531 14601 2 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.65908.rna.17 RNA gi|480983999|gb|AREP01000017.1| 14612 14683 2 + 72 tRNA-Val-GAC tRNAs
fig|6666666.65908.rna.18 RNA gi|480983999|gb|AREP01000017.1| 14722 14794 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.65908.rna.19 RNA gi|480984002|gb|AREP01000016.1| 35609 35694 2 + 86 tRNA-Pseudo-GGA - none -
fig|6666666.65908.rna.20 RNA gi|480984002|gb|AREP01000016.1| 44004 43920 -3 - 85 tRNA-Ser-CGA tRNAs
fig|6666666.65908.rna.21 RNA gi|480984002|gb|AREP01000016.1| 46654 46582 -1 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65908.rna.22 RNA gi|480984011|gb|AREP01000013.1| 821 749 -2 - 73 tRNA-Arg-CCT - none -
fig|6666666.65908.rna.23 RNA gi|480984016|gb|AREP01000011.1| 262 1 -1 - 262 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65908.rna.24 RNA gi|480984016|gb|AREP01000011.1| 5591 5519 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.65908.rna.25 RNA gi|480984016|gb|AREP01000011.1| 5686 5613 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.65908.rna.26 RNA gi|480984016|gb|AREP01000011.1| 6113 6040 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.65908.rna.27 RNA gi|480984016|gb|AREP01000011.1| 6220 6148 -1 - 73 tRNA-Glu-TTC - none -
fig|6666666.65908.rna.28 RNA gi|480984016|gb|AREP01000011.1| 8471 8399 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.65908.rna.29 RNA gi|480984016|gb|AREP01000011.1| 64138 64066 -1 - 73 tRNA-Thr-TGT - none -
fig|6666666.65908.rna.30 RNA gi|480984019|gb|AREP01000010.1| 84751 84824 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.65908.rna.31 RNA gi|480984019|gb|AREP01000010.1| 84829 84901 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.65908.rna.32 RNA gi|480984019|gb|AREP01000010.1| 88456 88528 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.65908.rna.33 RNA gi|480984025|gb|AREP01000008.1| 76112 76196 2 + 85 tRNA-Ser-TGA - none -
fig|6666666.65908.rna.34 RNA gi|480984025|gb|AREP01000008.1| 82894 82980 1 + 87 tRNA-Ser-GCT - none -
fig|6666666.65908.rna.35 RNA gi|480984025|gb|AREP01000008.1| 82985 83057 2 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65908.rna.36 RNA gi|480984032|gb|AREP01000006.1| 64767 64837 3 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.65908.rna.37 RNA gi|480984032|gb|AREP01000006.1| 165168 165047 -3 - 122 5S RNA - none -
fig|6666666.65908.rna.38 RNA gi|480984036|gb|AREP01000005.1| 81922 81849 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.65908.rna.39 RNA gi|480984036|gb|AREP01000005.1| 82155 82082 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.65908.rna.40 RNA gi|480984036|gb|AREP01000005.1| 82344 82273 -3 - 72 tRNA-Gly-TCC - none -
fig|6666666.65908.rna.41 RNA gi|480984036|gb|AREP01000005.1| 110059 110132 1 + 74 tRNA-Arg-TCT - none -
fig|6666666.65908.rna.42 RNA gi|480984036|gb|AREP01000005.1| 116772 116844 3 + 73 tRNA-His-GTG - none -
fig|6666666.65908.rna.43 RNA gi|480984036|gb|AREP01000005.1| 119256 119328 3 + 73 tRNA-Lys-CTT - none -
fig|6666666.65908.rna.44 RNA gi|480984036|gb|AREP01000005.1| 140561 140480 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.65908.rna.45 RNA gi|480984036|gb|AREP01000005.1| 167986 167914 -1 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.65908.rna.46 RNA gi|480984039|gb|AREP01000004.1| 5777 5704 -2 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.65908.rna.47 RNA gi|480984039|gb|AREP01000004.1| 66457 66543 1 + 87 tRNA-Leu-GAG tRNAs
fig|6666666.65908.rna.48 RNA gi|480984042|gb|AREP01000003.1| 103317 103399 3 + 83 tRNA-Tyr-GTA - none -
fig|6666666.65908.rna.49 RNA gi|480984042|gb|AREP01000003.1| 103641 103713 3 + 73 tRNA-Thr-GGT - none -
fig|6666666.65908.rna.50 RNA gi|480984042|gb|AREP01000003.1| 103758 103831 3 + 74 tRNA-Met-CAT - none -
fig|6666666.65908.rna.51 RNA gi|480984042|gb|AREP01000003.1| 103901 103973 2 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.65908.rna.52 RNA gi|480984045|gb|AREP01000002.1| 1004 932 -2 - 73 tRNA-Glu-CTC - none -
fig|6666666.65908.rna.53 RNA gi|480984045|gb|AREP01000002.1| 1100 1029 -2 - 72 tRNA-Gln-CTG - none -
fig|6666666.65908.rna.54 RNA gi|480984045|gb|AREP01000002.1| 127074 127147 3 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.65908.rna.55 RNA gi|480984048|gb|AREP01000001.1| 239907 239835 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.65908.rna.56 RNA gi|480984048|gb|AREP01000001.1| 272555 272482 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.65908.rna.57 RNA gi|480984048|gb|AREP01000001.1| 272743 272815 1 + 73 tRNA-Asn-GTT - none -