fig|6666666.65928.peg.1 CDS gi|559755378|gb|AYTI01000239.1| 191 319 2 + 129 hypothetical protein - none -
fig|6666666.65928.peg.2 CDS gi|559755382|gb|AYTI01000235.1| 385 191 -1 - 195 Glycerol dehydrogenase (EC 1.1.1.6) Respiratory dehydrogenases 1
fig|6666666.65928.peg.3 CDS gi|559755388|gb|AYTI01000229.1| 311 198 -2 - 114 hypothetical protein - none -
fig|6666666.65928.peg.4 CDS gi|559755390|gb|AYTI01000227.1| 312 184 -3 - 129 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.5 CDS gi|559755391|gb|AYTI01000226.1| 189 46 -3 - 144 hypothetical protein - none -
fig|6666666.65928.peg.6 CDS gi|559755391|gb|AYTI01000226.1| 449 291 -2 - 159 hypothetical protein - none -
fig|6666666.65928.peg.7 CDS gi|559755394|gb|AYTI01000223.1| 272 141 -2 - 132 FIG00545868: hypothetical protein - none -
fig|6666666.65928.peg.8 CDS gi|559755398|gb|AYTI01000219.1| 20 139 2 + 120 hypothetical protein - none -
fig|6666666.65928.peg.9 CDS gi|559755400|gb|AYTI01000217.1| 442 278 -1 - 165 hypothetical protein - none -
fig|6666666.65928.peg.10 CDS gi|559755402|gb|AYTI01000215.1| 182 301 2 + 120 hypothetical protein - none -
fig|6666666.65928.peg.11 CDS gi|559755405|gb|AYTI01000212.1| 246 109 -3 - 138 hypothetical protein - none -
fig|6666666.65928.peg.12 CDS gi|559755408|gb|AYTI01000209.1| 135 16 -3 - 120 hypothetical protein - none -
fig|6666666.65928.peg.13 CDS gi|559755411|gb|AYTI01000206.1| 342 67 -3 - 276 FIG00544679: hypothetical protein - none -
fig|6666666.65928.peg.14 CDS gi|559755414|gb|AYTI01000203.1| 659 285 -2 - 375 Cell wall-binding protein - none -
fig|6666666.65928.peg.15 CDS gi|559755417|gb|AYTI01000200.1| 67 198 1 + 132 FIG00545300: hypothetical protein - none -
fig|6666666.65928.peg.16 CDS gi|559755418|gb|AYTI01000199.1| 234 100 -3 - 135 hypothetical protein - none -
fig|6666666.65928.peg.17 CDS gi|559755421|gb|AYTI01000196.1| 208 47 -1 - 162 hypothetical protein - none -
fig|6666666.65928.peg.18 CDS gi|559755425|gb|AYTI01000192.1| 304 173 -1 - 132 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65928.peg.19 CDS gi|559755425|gb|AYTI01000192.1| 447 304 -3 - 144 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65928.peg.20 CDS gi|559755426|gb|AYTI01000191.1| 284 147 -2 - 138 hypothetical protein - none -
fig|6666666.65928.peg.21 CDS gi|559755427|gb|AYTI01000190.1| 66 233 3 + 168 hypothetical protein - none -
fig|6666666.65928.peg.22 CDS gi|559755428|gb|AYTI01000189.1| 67 198 1 + 132 FIG00545300: hypothetical protein - none -
fig|6666666.65928.peg.23 CDS gi|559755430|gb|AYTI01000187.1| 4 243 1 + 240 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.24 CDS gi|559755436|gb|AYTI01000181.1| 54 185 3 + 132 FIG00545300: hypothetical protein - none -
fig|6666666.65928.peg.25 CDS gi|559755438|gb|AYTI01000179.1| 286 441 1 + 156 hypothetical protein - none -
fig|6666666.65928.peg.26 CDS gi|559755441|gb|AYTI01000176.1| 308 135 -2 - 174 hypothetical protein - none -
fig|6666666.65928.peg.27 CDS gi|559755444|gb|AYTI01000173.1| 289 149 -1 - 141 hypothetical protein - none -
fig|6666666.65928.peg.28 CDS gi|559755445|gb|AYTI01000172.1| 24 197 3 + 174 hypothetical protein - none -
fig|6666666.65928.peg.29 CDS gi|559755446|gb|AYTI01000171.1| 433 38 -1 - 396 Transcriptional regulator, AraC family - none -
fig|6666666.65928.peg.30 CDS gi|559755448|gb|AYTI01000169.1| 28 180 1 + 153 hypothetical protein - none -
fig|6666666.65928.peg.31 CDS gi|559755449|gb|AYTI01000168.1| 106 258 1 + 153 hypothetical protein - none -
fig|6666666.65928.peg.32 CDS gi|559755451|gb|AYTI01000166.1| 409 32 -1 - 378 FIG00545499: hypothetical protein - none -
fig|6666666.65928.peg.33 CDS gi|559755452|gb|AYTI01000165.1| 143 24 -2 - 120 hypothetical protein - none -
fig|6666666.65928.peg.34 CDS gi|559755452|gb|AYTI01000165.1| 123 266 3 + 144 hypothetical protein - none -
fig|6666666.65928.peg.35 CDS gi|559755452|gb|AYTI01000165.1| 668 504 -2 - 165 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65928.peg.36 CDS gi|559755456|gb|AYTI01000161.1| 36 263 3 + 228 hypothetical protein - none -
fig|6666666.65928.peg.37 CDS gi|559755456|gb|AYTI01000161.1| 497 264 -2 - 234 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65928.peg.38 CDS gi|559755458|gb|AYTI01000159.1| 16 201 1 + 186 Putative ABC transport system ATP-binding protein - none -
fig|6666666.65928.peg.39 CDS gi|559755463|gb|AYTI01000154.1| 200 18 -2 - 183 Transcriptional regulator, MarR family - none -
fig|6666666.65928.peg.40 CDS gi|559755464|gb|AYTI01000153.1| 177 16 -3 - 162 hypothetical protein - none -
fig|6666666.65928.peg.41 CDS gi|559755465|gb|AYTI01000152.1| 275 114 -2 - 162 hypothetical protein - none -
fig|6666666.65928.peg.42 CDS gi|559755471|gb|AYTI01000146.1| 508 188 -1 - 321 unknown - none -
fig|6666666.65928.peg.43 CDS gi|559755472|gb|AYTI01000145.1| 243 97 -3 - 147 Lysophospholipid acyltransferase - none -
fig|6666666.65928.peg.44 CDS gi|559755473|gb|AYTI01000144.1| 164 15 -2 - 150 Lysophospholipid acyltransferase - none -
fig|6666666.65928.peg.45 CDS gi|559755476|gb|AYTI01000141.1| 13 144 1 + 132 FIG00545300: hypothetical protein - none -
fig|6666666.65928.peg.46 CDS gi|559755477|gb|AYTI01000140.1| 229 74 -1 - 156 hypothetical protein - none -
fig|6666666.65928.peg.47 CDS gi|559755477|gb|AYTI01000140.1| 195 449 3 + 255 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65928.peg.48 CDS gi|559755479|gb|AYTI01000138.1| 110 253 2 + 144 hypothetical protein - none -
fig|6666666.65928.peg.49 CDS gi|559755481|gb|AYTI01000136.1| 184 59 -1 - 126 periplasmic binding protein - none -
fig|6666666.65928.peg.50 CDS gi|559755482|gb|AYTI01000135.1| 185 18 -2 - 168 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.51 CDS gi|559755485|gb|AYTI01000132.1| 83 250 2 + 168 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65928.peg.52 CDS gi|559755489|gb|AYTI01000128.1| 221 358 2 + 138 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.65928.peg.53 CDS gi|559755489|gb|AYTI01000128.1| 554 408 -2 - 147 FIG007808: hypothetical protein - none -
fig|6666666.65928.peg.54 CDS gi|559755492|gb|AYTI01000125.1| 40 225 1 + 186 hypothetical protein - none -
fig|6666666.65928.peg.55 CDS gi|559755493|gb|AYTI01000124.1| 188 75 -2 - 114 hypothetical protein - none -
fig|6666666.65928.peg.56 CDS gi|559755493|gb|AYTI01000124.1| 254 448 2 + 195 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65928.peg.57 CDS gi|559755494|gb|AYTI01000123.1| 57 344 3 + 288 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65928.peg.58 CDS gi|559755496|gb|AYTI01000121.1| 232 507 1 + 276 FIG00544679: hypothetical protein - none -
fig|6666666.65928.peg.59 CDS gi|559755498|gb|AYTI01000119.1| 24 284 3 + 261 FIG00543890: hypothetical protein - none -
fig|6666666.65928.peg.60 CDS gi|559755498|gb|AYTI01000119.1| 451 338 -1 - 114 hypothetical protein - none -
fig|6666666.65928.peg.61 CDS gi|559755501|gb|AYTI01000116.1| 260 117 -2 - 144 hypothetical protein - none -
fig|6666666.65928.peg.62 CDS gi|559755502|gb|AYTI01000115.1| 362 243 -2 - 120 hypothetical protein - none -
fig|6666666.65928.peg.63 CDS gi|559755502|gb|AYTI01000115.1| 447 316 -3 - 132 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65928.peg.64 CDS gi|559755503|gb|AYTI01000114.1| 123 4 -3 - 120 hypothetical protein - none -
fig|6666666.65928.peg.65 CDS gi|559755507|gb|AYTI01000110.1| 31 411 1 + 381 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.66 CDS gi|559755508|gb|AYTI01000109.1| 91 318 1 + 228 hypothetical protein - none -
fig|6666666.65928.peg.67 CDS gi|559755509|gb|AYTI01000108.1| 90 317 3 + 228 hypothetical protein - none -
fig|6666666.65928.peg.68 CDS gi|559755511|gb|AYTI01000106.1| 48 236 3 + 189 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65928.peg.69 CDS gi|559755511|gb|AYTI01000106.1| 278 394 2 + 117 hypothetical protein - none -
fig|6666666.65928.peg.70 CDS gi|559755513|gb|AYTI01000104.1| 250 128 -1 - 123 hypothetical protein - none -
fig|6666666.65928.peg.71 CDS gi|559755514|gb|AYTI01000103.1| 294 446 3 + 153 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65928.peg.72 CDS gi|559755515|gb|AYTI01000102.1| 57 179 3 + 123 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65928.peg.73 CDS gi|559755515|gb|AYTI01000102.1| 274 561 1 + 288 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65928.peg.74 CDS gi|559755516|gb|AYTI01000101.1| 100 315 1 + 216 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.75 CDS gi|559755519|gb|AYTI01000098.1| 144 311 3 + 168 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65928.peg.76 CDS gi|559755520|gb|AYTI01000097.1| 172 333 1 + 162 Diphtheria toxin (NAD(+)--diphthamide ADP- ribosyltransferase) (EC 2.4.2.36) - none -
fig|6666666.65928.peg.77 CDS gi|559755521|gb|AYTI01000096.1| 208 11 -1 - 198 hypothetical membrane protein - none -
fig|6666666.65928.peg.78 CDS gi|559755522|gb|AYTI01000095.1| 379 77 -1 - 303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65928.peg.79 CDS gi|559755523|gb|AYTI01000094.1| 303 76 -3 - 228 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65928.peg.80 CDS gi|559755531|gb|AYTI01000086.1| 372 100 -3 - 273 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65928.peg.81 CDS gi|559755534|gb|AYTI01000083.1| 53 478 2 + 426 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65928.peg.82 CDS gi|559755541|gb|AYTI01000076.1| 28 348 1 + 321 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65928.peg.83 CDS gi|559755542|gb|AYTI01000075.1| 26 346 2 + 321 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65928.peg.84 CDS gi|559755543|gb|AYTI01000074.1| 193 68 -1 - 126 hypothetical protein - none -
fig|6666666.65928.peg.85 CDS gi|559755544|gb|AYTI01000073.1| 348 208 -3 - 141 putative ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.86 CDS gi|559755545|gb|AYTI01000072.1| 320 207 -2 - 114 hypothetical protein - none -
fig|6666666.65928.peg.87 CDS gi|559755546|gb|AYTI01000071.1| 116 247 2 + 132 hypothetical protein - none -
fig|6666666.65928.peg.88 CDS gi|559755546|gb|AYTI01000071.1| 666 385 -3 - 282 Transposase for IS3510b - none -
fig|6666666.65928.peg.89 CDS gi|559755546|gb|AYTI01000071.1| 904 686 -1 - 219 Mobile element protein - none -
fig|6666666.65928.peg.90 CDS gi|559755547|gb|AYTI01000070.1| 143 256 2 + 114 hypothetical protein - none -
fig|6666666.65928.peg.91 CDS gi|559755547|gb|AYTI01000070.1| 267 389 3 + 123 hypothetical protein - none -
fig|6666666.65928.peg.92 CDS gi|559755547|gb|AYTI01000070.1| 425 556 2 + 132 hypothetical protein - none -
fig|6666666.65928.peg.93 CDS gi|559755550|gb|AYTI01000067.1| 228 503 3 + 276 FIG00544679: hypothetical protein - none -
fig|6666666.65928.peg.94 CDS gi|559755551|gb|AYTI01000066.1| 226 501 1 + 276 FIG00544679: hypothetical protein - none -
fig|6666666.65928.peg.95 CDS gi|559755551|gb|AYTI01000066.1| 783 574 -3 - 210 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.65928.peg.96 CDS gi|559755552|gb|AYTI01000065.1| 231 506 3 + 276 FIG00544679: hypothetical protein - none -
fig|6666666.65928.peg.97 CDS gi|559755553|gb|AYTI01000064.1| 550 383 -1 - 168 hypothetical protein - none -
fig|6666666.65928.peg.98 CDS gi|559755554|gb|AYTI01000063.1| 330 1079 3 + 750 putative ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.99 CDS gi|559755554|gb|AYTI01000063.1| 1206 3680 3 + 2475 ABC-type transporter, permease component - none -
fig|6666666.65928.peg.100 CDS gi|559755554|gb|AYTI01000063.1| 3965 3732 -2 - 234 hypothetical protein - none -
fig|6666666.65928.peg.101 CDS gi|559755554|gb|AYTI01000063.1| 4405 4061 -1 - 345 camphor resistance protein CrcB - none -
fig|6666666.65928.peg.102 CDS gi|559755554|gb|AYTI01000063.1| 4533 6170 3 + 1638 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.65928.peg.103 CDS gi|559755554|gb|AYTI01000063.1| 6179 6736 2 + 558 FIG00544597: hypothetical protein - none -
fig|6666666.65928.peg.104 CDS gi|559755554|gb|AYTI01000063.1| 6944 6786 -2 - 159 hypothetical protein - none -
fig|6666666.65928.peg.105 CDS gi|559755554|gb|AYTI01000063.1| 6910 7626 1 + 717 FIG00544592: hypothetical protein - none -
fig|6666666.65928.peg.106 CDS gi|559755554|gb|AYTI01000063.1| 8153 7998 -2 - 156 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65928.peg.107 CDS gi|559755555|gb|AYTI01000062.1| 724 542 -1 - 183 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65928.peg.108 CDS gi|559755560|gb|AYTI01000057.1| 195 70 -3 - 126 periplasmic binding protein - none -
fig|6666666.65928.peg.109 CDS gi|559755561|gb|AYTI01000056.1| 8 448 2 + 441 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65928.peg.110 CDS gi|559755563|gb|AYTI01000054.1| 180 13 -3 - 168 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65928.peg.111 CDS gi|559755564|gb|AYTI01000053.1| 591 929 3 + 339 Nitrogen regulatory protein P-II - none -
fig|6666666.65928.peg.112 CDS gi|559755564|gb|AYTI01000053.1| 1002 2843 3 + 1842 [Protein-PII] uridylyltransferase (EC 2.7.7.59) CBSS-312309.3.peg.1965
fig|6666666.65928.peg.113 CDS gi|559755564|gb|AYTI01000053.1| 2813 3238 2 + 426 [Protein-PII] uridylyltransferase (EC 2.7.7.59) CBSS-312309.3.peg.1965
fig|6666666.65928.peg.114 CDS gi|559755564|gb|AYTI01000053.1| 3332 4948 2 + 1617 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65928.peg.115 CDS gi|559755564|gb|AYTI01000053.1| 5186 5659 2 + 474 SSU ribosomal protein S16p - none -
fig|6666666.65928.peg.116 CDS gi|559755564|gb|AYTI01000053.1| 6135 5737 -3 - 399 FIG00544922: hypothetical protein - none -
fig|6666666.65928.peg.117 CDS gi|559755564|gb|AYTI01000053.1| 6257 6826 2 + 570 16S rRNA processing protein RimM - none -
fig|6666666.65928.peg.118 CDS gi|559755566|gb|AYTI01000051.1| 1782 100 -3 - 1683 hypothetical protein - none -
fig|6666666.65928.peg.119 CDS gi|559755566|gb|AYTI01000051.1| 2711 2013 -2 - 699 Mobile element protein - none -
fig|6666666.65928.peg.120 CDS gi|559755566|gb|AYTI01000051.1| 3319 2873 -1 - 447 Mobile element protein - none -
fig|6666666.65928.peg.121 CDS gi|559755566|gb|AYTI01000051.1| 3417 3830 3 + 414 No significant database matches - none -
fig|6666666.65928.peg.122 CDS gi|559755566|gb|AYTI01000051.1| 3859 4086 1 + 228 hypothetical protein - none -
fig|6666666.65928.peg.123 CDS gi|559755566|gb|AYTI01000051.1| 4435 5034 1 + 600 hypothetical protein - none -
fig|6666666.65928.peg.124 CDS gi|559755566|gb|AYTI01000051.1| 5053 6066 1 + 1014 Transcriptional regulator - none -
fig|6666666.65928.peg.125 CDS gi|559755566|gb|AYTI01000051.1| 6204 7232 3 + 1029 Putative phage integrase - none -
fig|6666666.65928.peg.126 CDS gi|559755566|gb|AYTI01000051.1| 7229 7396 2 + 168 Putative phage integrase - none -
fig|6666666.65928.peg.127 CDS gi|559755567|gb|AYTI01000050.1| 344 826 2 + 483 hypothetical protein - none -
fig|6666666.65928.peg.128 CDS gi|559755567|gb|AYTI01000050.1| 869 1216 2 + 348 hypothetical protein - none -
fig|6666666.65928.peg.129 CDS gi|559755567|gb|AYTI01000050.1| 1422 1553 3 + 132 hypothetical protein - none -
fig|6666666.65928.peg.130 CDS gi|559755567|gb|AYTI01000050.1| 1632 1772 3 + 141 hypothetical protein - none -
fig|6666666.65928.peg.131 CDS gi|559755567|gb|AYTI01000050.1| 1772 2008 2 + 237 hypothetical protein - none -
fig|6666666.65928.peg.132 CDS gi|559755567|gb|AYTI01000050.1| 2263 2144 -1 - 120 hypothetical protein - none -
fig|6666666.65928.peg.133 CDS gi|559755567|gb|AYTI01000050.1| 3304 2468 -1 - 837 putative integrase - none -
fig|6666666.65928.peg.134 CDS gi|559755567|gb|AYTI01000050.1| 3711 3340 -3 - 372 putative integrase - none -
fig|6666666.65928.peg.135 CDS gi|559755568|gb|AYTI01000049.1| 852 10 -3 - 843 EpiH/GdmH-related protein - none -
fig|6666666.65928.peg.136 CDS gi|559755568|gb|AYTI01000049.1| 1074 3038 3 + 1965 FIG00543878: hypothetical protein - none -
fig|6666666.65928.peg.137 CDS gi|559755568|gb|AYTI01000049.1| 3514 3086 -1 - 429 hypothetical protein - none -
fig|6666666.65928.peg.138 CDS gi|559755568|gb|AYTI01000049.1| 4061 3534 -2 - 528 FIG00544046: hypothetical protein - none -
fig|6666666.65928.peg.139 CDS gi|559755568|gb|AYTI01000049.1| 5497 4112 -1 - 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65928.peg.140 CDS gi|559755568|gb|AYTI01000049.1| 5728 5570 -1 - 159 hypothetical protein - none -
fig|6666666.65928.peg.141 CDS gi|559755568|gb|AYTI01000049.1| 5968 6369 1 + 402 hypothetical protein - none -
fig|6666666.65928.peg.142 CDS gi|559755568|gb|AYTI01000049.1| 6649 7074 1 + 426 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.65928.peg.143 CDS gi|559755568|gb|AYTI01000049.1| 7273 7145 -1 - 129 FIG00544679: hypothetical protein - none -
fig|6666666.65928.peg.144 CDS gi|559755569|gb|AYTI01000048.1| 1911 91 -3 - 1821 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65928.peg.145 CDS gi|559755569|gb|AYTI01000048.1| 2327 1929 -2 - 399 transcriptional regulator, ArsR family - none -
fig|6666666.65928.peg.146 CDS gi|559755569|gb|AYTI01000048.1| 2875 2456 -1 - 420 hypothetical protein - none -
fig|6666666.65928.peg.147 CDS gi|559755569|gb|AYTI01000048.1| 2952 3173 3 + 222 hypothetical protein - none -
fig|6666666.65928.peg.148 CDS gi|559755569|gb|AYTI01000048.1| 3861 3208 -3 - 654 hypothetical protein - none -
fig|6666666.65928.peg.149 CDS gi|559755569|gb|AYTI01000048.1| 5011 6351 1 + 1341 hypothetical protein - none -
fig|6666666.65928.peg.150 CDS gi|559755569|gb|AYTI01000048.1| 6418 6708 1 + 291 hypothetical protein - none -
fig|6666666.65928.peg.151 CDS gi|559755569|gb|AYTI01000048.1| 6863 7246 2 + 384 hypothetical protein - none -
fig|6666666.65928.peg.152 CDS gi|559755569|gb|AYTI01000048.1| 7334 7768 2 + 435 probable DNA-binding protein - none -
fig|6666666.65928.peg.153 CDS gi|559755569|gb|AYTI01000048.1| 8610 7780 -3 - 831 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.65928.peg.154 CDS gi|559755569|gb|AYTI01000048.1| 8845 8967 1 + 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65928.peg.155 CDS gi|559755569|gb|AYTI01000048.1| 9441 9674 3 + 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.65928.peg.156 CDS gi|559755569|gb|AYTI01000048.1| 9801 10238 3 + 438 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65928.peg.157 CDS gi|559755569|gb|AYTI01000048.1| 10389 12548 3 + 2160 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65928.peg.158 CDS gi|559755569|gb|AYTI01000048.1| 13100 12615 -2 - 486 Putative bacterioferritin - none -
fig|6666666.65928.peg.159 CDS gi|559755569|gb|AYTI01000048.1| 13542 14483 3 + 942 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65928.peg.160 CDS gi|559755569|gb|AYTI01000048.1| 14680 14537 -1 - 144 hypothetical protein - none -
fig|6666666.65928.peg.161 CDS gi|559755569|gb|AYTI01000048.1| 14723 14881 2 + 159 hypothetical protein - none -
fig|6666666.65928.peg.162 CDS gi|559755569|gb|AYTI01000048.1| 15124 16716 1 + 1593 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65928.peg.163 CDS gi|559755569|gb|AYTI01000048.1| 17203 16859 -1 - 345 hypothetical protein - none -
fig|6666666.65928.peg.164 CDS gi|559755569|gb|AYTI01000048.1| 17471 17647 2 + 177 hypothetical protein - none -
fig|6666666.65928.peg.165 CDS gi|559755569|gb|AYTI01000048.1| 18072 17770 -3 - 303 hypothetical protein - none -
fig|6666666.65928.peg.166 CDS gi|559755570|gb|AYTI01000047.1| 40 210 1 + 171 hypothetical protein - none -
fig|6666666.65928.peg.167 CDS gi|559755570|gb|AYTI01000047.1| 176 376 2 + 201 hypothetical protein - none -
fig|6666666.65928.peg.168 CDS gi|559755573|gb|AYTI01000044.1| 285 172 -3 - 114 hypothetical protein - none -
fig|6666666.65928.peg.169 CDS gi|559755573|gb|AYTI01000044.1| 1367 1654 2 + 288 hypothetical protein - none -
fig|6666666.65928.peg.170 CDS gi|559755573|gb|AYTI01000044.1| 2732 2106 -2 - 627 Mobile element protein - none -
fig|6666666.65928.peg.171 CDS gi|559755573|gb|AYTI01000044.1| 3301 2855 -1 - 447 Mobile element protein - none -
fig|6666666.65928.peg.172 CDS gi|559755574|gb|AYTI01000043.1| 735 400 -3 - 336 FIG00996838: hypothetical protein - none -
fig|6666666.65928.peg.173 CDS gi|559755575|gb|AYTI01000042.1| 353 225 -2 - 129 FIG00996838: hypothetical protein - none -
fig|6666666.65928.peg.174 CDS gi|559755577|gb|AYTI01000040.1| 732 2306 3 + 1575 di- and tricarboxylate transporter - none -
fig|6666666.65928.peg.175 CDS gi|559755577|gb|AYTI01000040.1| 2552 2430 -2 - 123 hypothetical protein - none -
fig|6666666.65928.peg.176 CDS gi|559755577|gb|AYTI01000040.1| 2628 3461 3 + 834 Beta-glucoside bgl operon antiterminator, BglG family - none -
fig|6666666.65928.peg.177 CDS gi|559755577|gb|AYTI01000040.1| 3490 5076 1 + 1587 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.65928.peg.178 CDS gi|559755577|gb|AYTI01000040.1| 5076 5549 3 + 474 COG1263: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.65928.peg.179 CDS gi|559755577|gb|AYTI01000040.1| 5709 6512 3 + 804 Putative hydroxylase - none -
fig|6666666.65928.peg.180 CDS gi|559755578|gb|AYTI01000039.1| 81 230 3 + 150 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65928.peg.181 CDS gi|559755578|gb|AYTI01000039.1| 340 227 -1 - 114 hypothetical protein - none -
fig|6666666.65928.peg.182 CDS gi|559755578|gb|AYTI01000039.1| 485 300 -2 - 186 hypothetical protein - none -
fig|6666666.65928.peg.183 CDS gi|559755578|gb|AYTI01000039.1| 747 502 -3 - 246 hypothetical protein - none -
fig|6666666.65928.peg.184 CDS gi|559755578|gb|AYTI01000039.1| 706 2001 1 + 1296 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.65928.peg.185 CDS gi|559755578|gb|AYTI01000039.1| 2912 1998 -2 - 915 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65928.peg.186 CDS gi|559755578|gb|AYTI01000039.1| 3382 2939 -1 - 444 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65928.peg.187 CDS gi|559755578|gb|AYTI01000039.1| 4344 3949 -3 - 396 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.65928.peg.188 CDS gi|559755578|gb|AYTI01000039.1| 5105 4341 -2 - 765 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.65928.peg.189 CDS gi|559755578|gb|AYTI01000039.1| 5821 5105 -1 - 717 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.65928.peg.190 CDS gi|559755578|gb|AYTI01000039.1| 7142 5976 -2 - 1167 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.65928.peg.191 CDS gi|559755578|gb|AYTI01000039.1| 8164 7139 -1 - 1026 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis
fig|6666666.65928.peg.192 CDS gi|559755578|gb|AYTI01000039.1| 8465 8962 2 + 498 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.65928.peg.193 CDS gi|559755578|gb|AYTI01000039.1| 8943 9452 3 + 510 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.65928.peg.194 CDS gi|559755578|gb|AYTI01000039.1| 9486 10406 3 + 921 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65928.peg.195 CDS gi|559755578|gb|AYTI01000039.1| 11381 10416 -2 - 966 Adenosylcobinamide-phosphate synthase - none -
fig|6666666.65928.peg.196 CDS gi|559755578|gb|AYTI01000039.1| 12084 11647 -3 - 438 FIG01123188: hypothetical protein - none -
fig|6666666.65928.peg.197 CDS gi|559755578|gb|AYTI01000039.1| 12258 14993 3 + 2736 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65928.peg.198 CDS gi|559755578|gb|AYTI01000039.1| 16048 15083 -1 - 966 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.65928.peg.199 CDS gi|559755578|gb|AYTI01000039.1| 16120 16428 1 + 309 hypothetical protein - none -
fig|6666666.65928.peg.200 CDS gi|559755578|gb|AYTI01000039.1| 16425 17246 3 + 822 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.65928.peg.201 CDS gi|559755578|gb|AYTI01000039.1| 17609 17247 -2 - 363 hypothetical protein - none -
fig|6666666.65928.peg.202 CDS gi|559755578|gb|AYTI01000039.1| 18596 17787 -2 - 810 beta-lactamase class C - none -
fig|6666666.65928.peg.203 CDS gi|559755578|gb|AYTI01000039.1| 19351 18602 -1 - 750 FIG00544992: hypothetical protein - none -
fig|6666666.65928.peg.204 CDS gi|559755579|gb|AYTI01000038.1| 1647 409 -3 - 1239 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65928.peg.205 CDS gi|559755579|gb|AYTI01000038.1| 1704 2276 3 + 573 Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) G3E family of P-loop GTPases (metallocenter biosynthesis);
Glycerol fermentation to 1,3-propanediol
fig|6666666.65928.peg.206 CDS gi|559755579|gb|AYTI01000038.1| 3183 2344 -3 - 840 Putative transcriptional regulator - none -
fig|6666666.65928.peg.207 CDS gi|559755579|gb|AYTI01000038.1| 3946 4881 1 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65928.peg.208 CDS gi|559755579|gb|AYTI01000038.1| 5066 5632 2 + 567 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65928.peg.209 CDS gi|559755579|gb|AYTI01000038.1| 5990 5694 -2 - 297 predicted acetyltransferase - none -
fig|6666666.65928.peg.210 CDS gi|559755579|gb|AYTI01000038.1| 7516 6440 -1 - 1077 Glycerol dehydrogenase (EC 1.1.1.6) Respiratory dehydrogenases 1
fig|6666666.65928.peg.211 CDS gi|559755579|gb|AYTI01000038.1| 8427 9950 3 + 1524 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65928.peg.212 CDS gi|559755579|gb|AYTI01000038.1| 9954 10937 3 + 984 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65928.peg.213 CDS gi|559755579|gb|AYTI01000038.1| 10947 12515 3 + 1569 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65928.peg.214 CDS gi|559755579|gb|AYTI01000038.1| 12548 14095 2 + 1548 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65928.peg.215 CDS gi|559755579|gb|AYTI01000038.1| 15657 14152 -3 - 1506 putative coenzyme A transferase - none -
fig|6666666.65928.peg.216 CDS gi|559755579|gb|AYTI01000038.1| 16333 17478 1 + 1146 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65928.peg.217 CDS gi|559755579|gb|AYTI01000038.1| 17526 18278 3 + 753 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65928.peg.218 CDS gi|559755579|gb|AYTI01000038.1| 18561 18358 -3 - 204 hypothetical protein - none -
fig|6666666.65928.peg.219 CDS gi|559755579|gb|AYTI01000038.1| 19533 18760 -3 - 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65928.peg.220 CDS gi|559755579|gb|AYTI01000038.1| 20447 19569 -2 - 879 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65928.peg.221 CDS gi|559755579|gb|AYTI01000038.1| 21512 20475 -2 - 1038 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65928.peg.222 CDS gi|559755579|gb|AYTI01000038.1| 22668 21562 -3 - 1107 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65928.peg.223 CDS gi|559755579|gb|AYTI01000038.1| 23873 22938 -2 - 936 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65928.peg.224 CDS gi|559755579|gb|AYTI01000038.1| 23924 24712 2 + 789 FIG00544976: hypothetical protein - none -
fig|6666666.65928.peg.225 CDS gi|559755579|gb|AYTI01000038.1| 25752 24718 -3 - 1035 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.65928.peg.226 CDS gi|559755579|gb|AYTI01000038.1| 25821 26465 3 + 645 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65928.peg.227 CDS gi|559755579|gb|AYTI01000038.1| 27280 26462 -1 - 819 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.65928.peg.228 CDS gi|559755579|gb|AYTI01000038.1| 27262 27381 1 + 120 hypothetical protein - none -
fig|6666666.65928.peg.229 CDS gi|559755579|gb|AYTI01000038.1| 27433 28563 1 + 1131 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65928.peg.230 CDS gi|559755579|gb|AYTI01000038.1| 28782 28985 3 + 204 hypothetical protein - none -
fig|6666666.65928.peg.231 CDS gi|559755579|gb|AYTI01000038.1| 30146 29082 -2 - 1065 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65928.peg.232 CDS gi|559755579|gb|AYTI01000038.1| 30368 30225 -2 - 144 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65928.peg.233 CDS gi|559755580|gb|AYTI01000037.1| 813 1190 3 + 378 putative RNA polymerase sigma factor - none -
fig|6666666.65928.peg.234 CDS gi|559755580|gb|AYTI01000037.1| 1187 1453 2 + 267 putative RNA polymerase sigma factor - none -
fig|6666666.65928.peg.235 CDS gi|559755580|gb|AYTI01000037.1| 1489 1920 1 + 432 hypothetical protein - none -
fig|6666666.65928.peg.236 CDS gi|559755580|gb|AYTI01000037.1| 1930 2364 1 + 435 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65928.peg.237 CDS gi|559755580|gb|AYTI01000037.1| 3503 2361 -2 - 1143 Mrp protein homolog - none -
fig|6666666.65928.peg.238 CDS gi|559755580|gb|AYTI01000037.1| 4108 3509 -1 - 600 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.65928.peg.239 CDS gi|559755580|gb|AYTI01000037.1| 5386 4112 -1 - 1275 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65928.peg.240 CDS gi|559755580|gb|AYTI01000037.1| 5567 6229 2 + 663 FIG00544048: hypothetical protein - none -
fig|6666666.65928.peg.241 CDS gi|559755581|gb|AYTI01000036.1| 330 1361 3 + 1032 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65928.peg.242 CDS gi|559755581|gb|AYTI01000036.1| 1600 1788 1 + 189 hypothetical protein - none -
fig|6666666.65928.peg.243 CDS gi|559755581|gb|AYTI01000036.1| 1858 2895 1 + 1038 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65928.peg.244 CDS gi|559755581|gb|AYTI01000036.1| 3311 4270 2 + 960 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65928.peg.245 CDS gi|559755581|gb|AYTI01000036.1| 5460 4267 -3 - 1194 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65928.peg.246 CDS gi|559755581|gb|AYTI01000036.1| 5613 6518 3 + 906 O-antigen export system permease protein RfbD - none -
fig|6666666.65928.peg.247 CDS gi|559755581|gb|AYTI01000036.1| 6534 7331 3 + 798 O-antigen export system, ATP-binding protein - none -
fig|6666666.65928.peg.248 CDS gi|559755581|gb|AYTI01000036.1| 8078 7356 -2 - 723 hypothetical protein - none -
fig|6666666.65928.peg.249 CDS gi|559755581|gb|AYTI01000036.1| 9196 8195 -1 - 1002 Putative membrane protein - none -
fig|6666666.65928.peg.250 CDS gi|559755581|gb|AYTI01000036.1| 10191 9316 -3 - 876 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.65928.peg.251 CDS gi|559755581|gb|AYTI01000036.1| 11087 10188 -2 - 900 FIG00549834: hypothetical protein - none -
fig|6666666.65928.peg.252 CDS gi|559755581|gb|AYTI01000036.1| 11779 11084 -1 - 696 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.65928.peg.253 CDS gi|559755581|gb|AYTI01000036.1| 12851 11880 -2 - 972 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.65928.peg.254 CDS gi|559755581|gb|AYTI01000036.1| 13093 13995 1 + 903 Putative glycosyl transferase - none -
fig|6666666.65928.peg.255 CDS gi|559755581|gb|AYTI01000036.1| 14448 13996 -3 - 453 FIG00544442: hypothetical protein - none -
fig|6666666.65928.peg.256 CDS gi|559755581|gb|AYTI01000036.1| 15299 14460 -2 - 840 FIG00545361: hypothetical protein - none -
fig|6666666.65928.peg.257 CDS gi|559755581|gb|AYTI01000036.1| 15862 15341 -1 - 522 FIG00547084: hypothetical protein - none -
fig|6666666.65928.peg.258 CDS gi|559755581|gb|AYTI01000036.1| 16329 15859 -3 - 471 FIG00544111: hypothetical protein - none -
fig|6666666.65928.peg.259 CDS gi|559755581|gb|AYTI01000036.1| 16364 16600 2 + 237 hypothetical protein - none -
fig|6666666.65928.peg.260 CDS gi|559755581|gb|AYTI01000036.1| 16694 18160 2 + 1467 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65928.peg.261 CDS gi|559755581|gb|AYTI01000036.1| 18182 18943 2 + 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.65928.peg.262 CDS gi|559755581|gb|AYTI01000036.1| 19097 21172 2 + 2076 putative membrane protein - none -
fig|6666666.65928.peg.263 CDS gi|559755581|gb|AYTI01000036.1| 21165 24455 3 + 3291 putative arabinosyltransferase - none -
fig|6666666.65928.peg.264 CDS gi|559755581|gb|AYTI01000036.1| 25324 24452 -1 - 873 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65928.peg.265 CDS gi|559755581|gb|AYTI01000036.1| 26216 25317 -2 - 900 FIG00547725: hypothetical protein - none -
fig|6666666.65928.peg.266 CDS gi|559755581|gb|AYTI01000036.1| 26755 26213 -1 - 543 hypothetical protein - none -
fig|6666666.65928.peg.267 CDS gi|559755581|gb|AYTI01000036.1| 26826 28661 3 + 1836 putative endopeptidase - none -
fig|6666666.65928.peg.268 CDS gi|559755581|gb|AYTI01000036.1| 28674 29513 3 + 840 FIG00544069: hypothetical protein - none -
fig|6666666.65928.peg.269 CDS gi|559755581|gb|AYTI01000036.1| 29584 30303 1 + 720 Glycerol uptake facilitator protein Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerol fermentation to 1,3-propanediol;
Osmoregulation
fig|6666666.65928.peg.270 CDS gi|559755581|gb|AYTI01000036.1| 30313 31839 1 + 1527 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.271 CDS gi|559755581|gb|AYTI01000036.1| 33161 31836 -2 - 1326 hypothetical protein - none -
fig|6666666.65928.peg.272 CDS gi|559755581|gb|AYTI01000036.1| 33503 33207 -2 - 297 hypothetical protein - none -
fig|6666666.65928.peg.273 CDS gi|559755581|gb|AYTI01000036.1| 34332 33508 -3 - 825 lactoylglutathione lyase-like protein - none -
fig|6666666.65928.peg.274 CDS gi|559755581|gb|AYTI01000036.1| 34622 34332 -2 - 291 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65928.peg.275 CDS gi|559755581|gb|AYTI01000036.1| 34981 34661 -1 - 321 FIG00547592: hypothetical protein - none -
fig|6666666.65928.peg.276 CDS gi|559755581|gb|AYTI01000036.1| 35278 35033 -1 - 246 Threonine efflux protein - none -
fig|6666666.65928.peg.277 CDS gi|559755581|gb|AYTI01000036.1| 35505 35624 3 + 120 hypothetical protein - none -
fig|6666666.65928.peg.278 CDS gi|559755581|gb|AYTI01000036.1| 36411 35710 -3 - 702 putative short-chain dehydrogenase - none -
fig|6666666.65928.peg.279 CDS gi|559755581|gb|AYTI01000036.1| 37058 36390 -2 - 669 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.65928.peg.280 CDS gi|559755581|gb|AYTI01000036.1| 37756 37133 -1 - 624 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.65928.peg.281 CDS gi|559755581|gb|AYTI01000036.1| 37869 38534 3 + 666 Galactoside O-acetyltransferase (EC 2.3.1.18) - none -
fig|6666666.65928.peg.282 CDS gi|559755581|gb|AYTI01000036.1| 38548 40992 1 + 2445 ATP-dependent helicase HrpB - none -
fig|6666666.65928.peg.283 CDS gi|559755581|gb|AYTI01000036.1| 42551 41010 -2 - 1542 Putative integral membrane protein - none -
fig|6666666.65928.peg.284 CDS gi|559755581|gb|AYTI01000036.1| 43393 42563 -1 - 831 Putative phosphotransferase system protein - none -
fig|6666666.65928.peg.285 CDS gi|559755581|gb|AYTI01000036.1| 44336 43560 -2 - 777 FIG00545045: hypothetical protein - none -
fig|6666666.65928.peg.286 CDS gi|559755581|gb|AYTI01000036.1| 44444 45064 2 + 621 hypothetical protein - none -
fig|6666666.65928.peg.287 CDS gi|559755581|gb|AYTI01000036.1| 45126 46199 3 + 1074 FIG00545643: hypothetical protein - none -
fig|6666666.65928.peg.288 CDS gi|559755581|gb|AYTI01000036.1| 47053 46196 -1 - 858 hypothetical protein - none -
fig|6666666.65928.peg.289 CDS gi|559755581|gb|AYTI01000036.1| 47406 47053 -3 - 354 hypothetical protein - none -
fig|6666666.65928.peg.290 CDS gi|559755581|gb|AYTI01000036.1| 47832 47416 -3 - 417 Organic hydroperoxide resistance transcriptional regulator CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.65928.peg.291 CDS gi|559755581|gb|AYTI01000036.1| 49566 47920 -3 - 1647 FIG00544558: hypothetical protein - none -
fig|6666666.65928.peg.292 CDS gi|559755581|gb|AYTI01000036.1| 50768 49698 -2 - 1071 FIG00549925: hypothetical protein - none -
fig|6666666.65928.peg.293 CDS gi|559755581|gb|AYTI01000036.1| 52347 50872 -3 - 1476 hypothetical protein - none -
fig|6666666.65928.peg.294 CDS gi|559755581|gb|AYTI01000036.1| 53154 53294 3 + 141 FIG00545208: hypothetical protein - none -
fig|6666666.65928.peg.295 CDS gi|559755581|gb|AYTI01000036.1| 53339 54016 2 + 678 FIG00545208: hypothetical protein - none -
fig|6666666.65928.peg.296 CDS gi|559755581|gb|AYTI01000036.1| 54576 54019 -3 - 558 carbonic anhydrase, family 3 - none -
fig|6666666.65928.peg.297 CDS gi|559755581|gb|AYTI01000036.1| 55245 54658 -3 - 588 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65928.peg.298 CDS gi|559755581|gb|AYTI01000036.1| 55339 56145 1 + 807 Putative lipase - none -
fig|6666666.65928.peg.299 CDS gi|559755581|gb|AYTI01000036.1| 56179 56364 1 + 186 hypothetical protein - none -
fig|6666666.65928.peg.300 CDS gi|559755581|gb|AYTI01000036.1| 56865 58070 3 + 1206 FIG01029243: hypothetical protein - none -
fig|6666666.65928.peg.301 CDS gi|559755581|gb|AYTI01000036.1| 58074 59651 3 + 1578 hypothetical protein - none -
fig|6666666.65928.peg.302 CDS gi|559755581|gb|AYTI01000036.1| 59644 62325 1 + 2682 FIG01028573: hypothetical protein - none -
fig|6666666.65928.peg.303 CDS gi|559755581|gb|AYTI01000036.1| 62330 63361 2 + 1032 FIG01029391: hypothetical protein - none -
fig|6666666.65928.peg.304 CDS gi|559755581|gb|AYTI01000036.1| 63366 64799 3 + 1434 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.65928.peg.305 CDS gi|559755581|gb|AYTI01000036.1| 64951 65250 1 + 300 hypothetical protein - none -
fig|6666666.65928.peg.306 CDS gi|559755582|gb|AYTI01000035.1| 24 353 3 + 330 FIG00544172: hypothetical protein - none -
fig|6666666.65928.peg.307 CDS gi|559755583|gb|AYTI01000034.1| 517 53 -1 - 465 FIG00545300: hypothetical protein - none -
fig|6666666.65928.peg.308 CDS gi|559755583|gb|AYTI01000034.1| 935 3742 2 + 2808 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) TCA Cycle
fig|6666666.65928.peg.309 CDS gi|559755583|gb|AYTI01000034.1| 3839 4417 2 + 579 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.310 CDS gi|559755583|gb|AYTI01000034.1| 4495 5214 1 + 720 GMP synthase - none -
fig|6666666.65928.peg.311 CDS gi|559755583|gb|AYTI01000034.1| 5267 5536 2 + 270 ACT domain protein - none -
fig|6666666.65928.peg.312 CDS gi|559755583|gb|AYTI01000034.1| 5558 6922 2 + 1365 FIG00848225: hypothetical protein - none -
fig|6666666.65928.peg.313 CDS gi|559755583|gb|AYTI01000034.1| 7191 6982 -3 - 210 hypothetical protein - none -
fig|6666666.65928.peg.314 CDS gi|559755583|gb|AYTI01000034.1| 7334 8455 2 + 1122 hypothetical protein - none -
fig|6666666.65928.peg.315 CDS gi|559755583|gb|AYTI01000034.1| 10205 10047 -2 - 159 hypothetical protein - none -
fig|6666666.65928.peg.316 CDS gi|559755584|gb|AYTI01000033.1| 1207 86 -1 - 1122 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65928.peg.317 CDS gi|559755584|gb|AYTI01000033.1| 3072 1204 -3 - 1869 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65928.peg.318 CDS gi|559755584|gb|AYTI01000033.1| 3745 3410 -1 - 336 hypothetical protein - none -
fig|6666666.65928.peg.319 CDS gi|559755584|gb|AYTI01000033.1| 4888 3791 -1 - 1098 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65928.peg.320 CDS gi|559755584|gb|AYTI01000033.1| 5524 4910 -1 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65928.peg.321 CDS gi|559755584|gb|AYTI01000033.1| 6255 5674 -3 - 582 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65928.peg.322 CDS gi|559755584|gb|AYTI01000033.1| 6452 6294 -2 - 159 hypothetical protein - none -
fig|6666666.65928.peg.323 CDS gi|559755584|gb|AYTI01000033.1| 7362 6610 -3 - 753 FIG000859: hypothetical protein - none -
fig|6666666.65928.peg.324 CDS gi|559755584|gb|AYTI01000033.1| 8502 7642 -3 - 861 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.65928.peg.325 CDS gi|559755584|gb|AYTI01000033.1| 8754 9233 3 + 480 putative integral membrane protein - none -
fig|6666666.65928.peg.326 CDS gi|559755584|gb|AYTI01000033.1| 9203 10201 2 + 999 putative integral membrane protein - none -
fig|6666666.65928.peg.327 CDS gi|559755584|gb|AYTI01000033.1| 10263 10976 3 + 714 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.328 CDS gi|559755584|gb|AYTI01000033.1| 10973 12184 2 + 1212 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65928.peg.329 CDS gi|559755584|gb|AYTI01000033.1| 12654 12196 -3 - 459 FIG053954: Probable conserved membrane protein - none -
fig|6666666.65928.peg.330 CDS gi|559755584|gb|AYTI01000033.1| 13760 12660 -2 - 1101 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.65928.peg.331 CDS gi|559755584|gb|AYTI01000033.1| 14773 13856 -1 - 918 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.65928.peg.332 CDS gi|559755584|gb|AYTI01000033.1| 15459 14770 -3 - 690 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.333 CDS gi|559755584|gb|AYTI01000033.1| 16045 15452 -1 - 594 FIG049476: HIT family protein - none -
fig|6666666.65928.peg.334 CDS gi|559755584|gb|AYTI01000033.1| 18285 16216 -3 - 2070 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.65928.peg.335 CDS gi|559755584|gb|AYTI01000033.1| 19826 18519 -2 - 1308 Dyp-type peroxidase family protein - none -
fig|6666666.65928.peg.336 CDS gi|559755584|gb|AYTI01000033.1| 20543 19938 -2 - 606 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65928.peg.337 CDS gi|559755584|gb|AYTI01000033.1| 21087 20548 -3 - 540 FIG00543909: hypothetical protein - none -
fig|6666666.65928.peg.338 CDS gi|559755584|gb|AYTI01000033.1| 22183 21860 -1 - 324 hypothetical protein - none -
fig|6666666.65928.peg.339 CDS gi|559755584|gb|AYTI01000033.1| 22182 22421 3 + 240 hypothetical protein - none -
fig|6666666.65928.peg.340 CDS gi|559755585|gb|AYTI01000032.1| 100 2058 1 + 1959 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65928.peg.341 CDS gi|559755585|gb|AYTI01000032.1| 2417 3115 2 + 699 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.65928.peg.342 CDS gi|559755585|gb|AYTI01000032.1| 3380 3225 -2 - 156 hypothetical protein - none -
fig|6666666.65928.peg.343 CDS gi|559755585|gb|AYTI01000032.1| 3339 4295 3 + 957 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65928.peg.344 CDS gi|559755585|gb|AYTI01000032.1| 4326 4649 3 + 324 Thioredoxin - none -
fig|6666666.65928.peg.345 CDS gi|559755585|gb|AYTI01000032.1| 4738 5349 1 + 612 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.65928.peg.346 CDS gi|559755585|gb|AYTI01000032.1| 5349 5918 3 + 570 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.65928.peg.347 CDS gi|559755585|gb|AYTI01000032.1| 6637 5969 -1 - 669 FIG007808: hypothetical protein - none -
fig|6666666.65928.peg.348 CDS gi|559755585|gb|AYTI01000032.1| 7731 6679 -3 - 1053 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65928.peg.349 CDS gi|559755585|gb|AYTI01000032.1| 8729 7737 -2 - 993 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65928.peg.350 CDS gi|559755585|gb|AYTI01000032.1| 9506 8835 -2 - 672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA modification and chromosome partitioning cluster
fig|6666666.65928.peg.351 CDS gi|559755585|gb|AYTI01000032.1| 10581 9691 -3 - 891 Inner membrane protein translocase component YidC, long form RNA modification cluster
fig|6666666.65928.peg.352 CDS gi|559755585|gb|AYTI01000032.1| 10597 10773 1 + 177 hypothetical protein - none -
fig|6666666.65928.peg.353 CDS gi|559755585|gb|AYTI01000032.1| 10907 10749 -2 - 159 Protein YidD RNA modification cluster
fig|6666666.65928.peg.354 CDS gi|559755585|gb|AYTI01000032.1| 11408 11052 -2 - 357 Ribonuclease P protein component (EC 3.1.26.5) RNA modification cluster;
tRNA processing
fig|6666666.65928.peg.355 CDS gi|559755585|gb|AYTI01000032.1| 11578 11435 -1 - 144 LSU ribosomal protein L34p RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.65928.peg.356 CDS gi|559755585|gb|AYTI01000032.1| 12318 12470 3 + 153 hypothetical protein - none -
fig|6666666.65928.peg.357 CDS gi|559755585|gb|AYTI01000032.1| 12554 14380 2 + 1827 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65928.peg.358 CDS gi|559755585|gb|AYTI01000032.1| 14969 16156 2 + 1188 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65928.peg.359 CDS gi|559755585|gb|AYTI01000032.1| 16221 17456 3 + 1236 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65928.peg.360 CDS gi|559755585|gb|AYTI01000032.1| 17437 18009 1 + 573 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65928.peg.361 CDS gi|559755585|gb|AYTI01000032.1| 18149 19027 2 + 879 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65928.peg.362 CDS gi|559755585|gb|AYTI01000032.1| 19035 20192 3 + 1158 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65928.peg.363 CDS gi|559755586|gb|AYTI01000031.1| 879 1121 3 + 243 FIG00549194: hypothetical protein - none -
fig|6666666.65928.peg.364 CDS gi|559755586|gb|AYTI01000031.1| 1214 1795 2 + 582 Putative thiamine biosynthesis related protein - none -
fig|6666666.65928.peg.365 CDS gi|559755586|gb|AYTI01000031.1| 3249 1855 -3 - 1395 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65928.peg.366 CDS gi|559755586|gb|AYTI01000031.1| 3770 3369 -2 - 402 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65928.peg.367 CDS gi|559755586|gb|AYTI01000031.1| 5799 3925 -3 - 1875 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65928.peg.368 CDS gi|559755586|gb|AYTI01000031.1| 5965 5846 -1 - 120 hypothetical protein - none -
fig|6666666.65928.peg.369 CDS gi|559755586|gb|AYTI01000031.1| 5950 6486 1 + 537 putative ribonuclease - none -
fig|6666666.65928.peg.370 CDS gi|559755586|gb|AYTI01000031.1| 6476 6733 2 + 258 hypothetical protein - none -
fig|6666666.65928.peg.371 CDS gi|559755586|gb|AYTI01000031.1| 7830 6730 -3 - 1101 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65928.peg.372 CDS gi|559755587|gb|AYTI01000030.1| 818 2833 2 + 2016 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.65928.peg.373 CDS gi|559755587|gb|AYTI01000030.1| 2863 5061 1 + 2199 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65928.peg.374 CDS gi|559755587|gb|AYTI01000030.1| 6015 5122 -3 - 894 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65928.peg.375 CDS gi|559755587|gb|AYTI01000030.1| 6436 6119 -1 - 318 FIG00544011: hypothetical protein - none -
fig|6666666.65928.peg.376 CDS gi|559755587|gb|AYTI01000030.1| 6570 7028 3 + 459 Methylmalonyl-CoA epimerase (EC 5.1.99.1); Ethylmalonyl-CoA epimerase - none -
fig|6666666.65928.peg.377 CDS gi|559755587|gb|AYTI01000030.1| 7946 7365 -2 - 582 FIG00996186: hypothetical protein - none -
fig|6666666.65928.peg.378 CDS gi|559755587|gb|AYTI01000030.1| 8384 8067 -2 - 318 FIG00544079: hypothetical protein - none -
fig|6666666.65928.peg.379 CDS gi|559755588|gb|AYTI01000029.1| 700 104 -1 - 597 FIG00996838: hypothetical protein - none -
fig|6666666.65928.peg.380 CDS gi|559755588|gb|AYTI01000029.1| 1214 726 -2 - 489 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65928.peg.381 CDS gi|559755588|gb|AYTI01000029.1| 1354 1226 -1 - 129 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65928.peg.382 CDS gi|559755588|gb|AYTI01000029.1| 2325 1324 -3 - 1002 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65928.peg.383 CDS gi|559755588|gb|AYTI01000029.1| 2516 2391 -2 - 126 hypothetical protein - none -
fig|6666666.65928.peg.384 CDS gi|559755588|gb|AYTI01000029.1| 2734 3813 1 + 1080 MutT/nudix family protein - none -
fig|6666666.65928.peg.385 CDS gi|559755588|gb|AYTI01000029.1| 3810 6713 3 + 2904 probable secreted protein. - none -
fig|6666666.65928.peg.386 CDS gi|559755589|gb|AYTI01000028.1| 597 40 -3 - 558 FIG00544037: hypothetical protein - none -
fig|6666666.65928.peg.387 CDS gi|559755589|gb|AYTI01000028.1| 932 1513 2 + 582 CarD-like transcriptional regulator - none -
fig|6666666.65928.peg.388 CDS gi|559755589|gb|AYTI01000028.1| 1521 2258 3 + 738 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65928.peg.389 CDS gi|559755589|gb|AYTI01000028.1| 2251 2730 1 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65928.peg.390 CDS gi|559755589|gb|AYTI01000028.1| 2791 4188 1 + 1398 Cysteinyl-tRNA synthetase (EC 6.1.1.16) Zinc regulated enzymes;
tRNA aminoacylation, Cys
fig|6666666.65928.peg.391 CDS gi|559755589|gb|AYTI01000028.1| 4210 5151 1 + 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) - none -
fig|6666666.65928.peg.392 CDS gi|559755589|gb|AYTI01000028.1| 5961 7052 3 + 1092 Transcriptional regulator, LacI family - none -
fig|6666666.65928.peg.393 CDS gi|559755589|gb|AYTI01000028.1| 7774 7049 -1 - 726 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65928.peg.394 CDS gi|559755589|gb|AYTI01000028.1| 8263 7784 -1 - 480 FIG00544334: hypothetical protein - none -
fig|6666666.65928.peg.395 CDS gi|559755589|gb|AYTI01000028.1| 9735 8260 -3 - 1476 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.65928.peg.396 CDS gi|559755589|gb|AYTI01000028.1| 10088 9744 -2 - 345 Putative uncharacterized protein - none -
fig|6666666.65928.peg.397 CDS gi|559755589|gb|AYTI01000028.1| 11708 10161 -2 - 1548 Putative amino acid export carrier protein - none -
fig|6666666.65928.peg.398 CDS gi|559755589|gb|AYTI01000028.1| 13040 12534 -2 - 507 hypothetical protein - none -
fig|6666666.65928.peg.399 CDS gi|559755589|gb|AYTI01000028.1| 13937 14554 2 + 618 hypothetical protein - none -
fig|6666666.65928.peg.400 CDS gi|559755589|gb|AYTI01000028.1| 14658 14771 3 + 114 hypothetical protein - none -
fig|6666666.65928.peg.401 CDS gi|559755589|gb|AYTI01000028.1| 15240 14779 -3 - 462 Phage protein - none -
fig|6666666.65928.peg.402 CDS gi|559755589|gb|AYTI01000028.1| 15651 15292 -3 - 360 hypothetical protein - none -
fig|6666666.65928.peg.403 CDS gi|559755589|gb|AYTI01000028.1| 16003 15887 -1 - 117 hypothetical protein - none -
fig|6666666.65928.peg.404 CDS gi|559755589|gb|AYTI01000028.1| 16497 17774 3 + 1278 hypothetical protein - none -
fig|6666666.65928.peg.405 CDS gi|559755589|gb|AYTI01000028.1| 19293 17824 -3 - 1470 Putative amino acid export carrier protein - none -
fig|6666666.65928.peg.406 CDS gi|559755589|gb|AYTI01000028.1| 19448 21184 2 + 1737 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65928.peg.407 CDS gi|559755589|gb|AYTI01000028.1| 21328 22032 1 + 705 hypothetical protein - none -
fig|6666666.65928.peg.408 CDS gi|559755589|gb|AYTI01000028.1| 22001 22207 2 + 207 hypothetical protein - none -
fig|6666666.65928.peg.409 CDS gi|559755589|gb|AYTI01000028.1| 24122 22212 -2 - 1911 xanthine/uracil permease - none -
fig|6666666.65928.peg.410 CDS gi|559755589|gb|AYTI01000028.1| 25379 24195 -2 - 1185 hypothetical protein - none -
fig|6666666.65928.peg.411 CDS gi|559755589|gb|AYTI01000028.1| 26027 25458 -2 - 570 FIG00548485: hypothetical protein - none -
fig|6666666.65928.peg.412 CDS gi|559755589|gb|AYTI01000028.1| 27468 26014 -3 - 1455 FIG00544776: hypothetical protein - none -
fig|6666666.65928.peg.413 CDS gi|559755589|gb|AYTI01000028.1| 27640 28353 1 + 714 DNA-binding response regulator - none -
fig|6666666.65928.peg.414 CDS gi|559755589|gb|AYTI01000028.1| 28397 29173 2 + 777 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.65928.peg.415 CDS gi|559755589|gb|AYTI01000028.1| 29158 29904 1 + 747 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.65928.peg.416 CDS gi|559755589|gb|AYTI01000028.1| 30518 29901 -2 - 618 hypothetical protein - none -
fig|6666666.65928.peg.417 CDS gi|559755589|gb|AYTI01000028.1| 30948 30523 -3 - 426 HIT family protein - none -
fig|6666666.65928.peg.418 CDS gi|559755589|gb|AYTI01000028.1| 30972 32267 3 + 1296 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65928.peg.419 CDS gi|559755589|gb|AYTI01000028.1| 32325 33659 3 + 1335 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.65928.peg.420 CDS gi|559755589|gb|AYTI01000028.1| 33652 34308 1 + 657 Potassium uptake protein, integral membrane component, KtrA - none -
fig|6666666.65928.peg.421 CDS gi|559755589|gb|AYTI01000028.1| 34346 35776 2 + 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65928.peg.422 CDS gi|559755590|gb|AYTI01000027.1| 36 155 3 + 120 FIG00544048: hypothetical protein - none -
fig|6666666.65928.peg.423 CDS gi|559755590|gb|AYTI01000027.1| 1040 219 -2 - 822 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65928.peg.424 CDS gi|559755590|gb|AYTI01000027.1| 3904 1106 -1 - 2799 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65928.peg.425 CDS gi|559755590|gb|AYTI01000027.1| 7758 4066 -3 - 3693 FIG00543822: hypothetical protein - none -
fig|6666666.65928.peg.426 CDS gi|559755590|gb|AYTI01000027.1| 8606 7779 -2 - 828 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.65928.peg.427 CDS gi|559755590|gb|AYTI01000027.1| 9603 8788 -3 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65928.peg.428 CDS gi|559755590|gb|AYTI01000027.1| 9602 11221 2 + 1620 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65928.peg.429 CDS gi|559755590|gb|AYTI01000027.1| 11218 12012 1 + 795 FIG00548916: hypothetical protein - none -
fig|6666666.65928.peg.430 CDS gi|559755590|gb|AYTI01000027.1| 12046 12834 1 + 789 FIG00544678: hypothetical protein - none -
fig|6666666.65928.peg.431 CDS gi|559755590|gb|AYTI01000027.1| 13135 12884 -1 - 252 hypothetical protein - none -
fig|6666666.65928.peg.432 CDS gi|559755590|gb|AYTI01000027.1| 13605 13739 3 + 135 hypothetical protein - none -
fig|6666666.65928.peg.433 CDS gi|559755590|gb|AYTI01000027.1| 13797 14684 3 + 888 Putative aldose 1-epimerase - none -
fig|6666666.65928.peg.434 CDS gi|559755590|gb|AYTI01000027.1| 14724 16382 3 + 1659 Predicted sodium-dependent galactose transporter - none -
fig|6666666.65928.peg.435 CDS gi|559755590|gb|AYTI01000027.1| 16415 16723 2 + 309 FIG00547530: hypothetical protein - none -
fig|6666666.65928.peg.436 CDS gi|559755590|gb|AYTI01000027.1| 16723 17838 1 + 1116 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.65928.peg.437 CDS gi|559755590|gb|AYTI01000027.1| 17902 19062 1 + 1161 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.65928.peg.438 CDS gi|559755590|gb|AYTI01000027.1| 19264 21288 1 + 2025 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65928.peg.439 CDS gi|559755590|gb|AYTI01000027.1| 21376 21795 1 + 420 hypothetical protein - none -
fig|6666666.65928.peg.440 CDS gi|559755590|gb|AYTI01000027.1| 21826 22263 1 + 438 hypothetical protein - none -
fig|6666666.65928.peg.441 CDS gi|559755590|gb|AYTI01000027.1| 22794 22324 -3 - 471 FIG00544250: hypothetical protein - none -
fig|6666666.65928.peg.442 CDS gi|559755590|gb|AYTI01000027.1| 23422 22835 -1 - 588 FIG00544279: hypothetical protein - none -
fig|6666666.65928.peg.443 CDS gi|559755590|gb|AYTI01000027.1| 25016 23457 -2 - 1560 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.65928.peg.444 CDS gi|559755590|gb|AYTI01000027.1| 25161 28190 3 + 3030 Helicase, SNF2/RAD54 family - none -
fig|6666666.65928.peg.445 CDS gi|559755590|gb|AYTI01000027.1| 28192 28977 1 + 786 FIG00545674: hypothetical protein - none -
fig|6666666.65928.peg.446 CDS gi|559755590|gb|AYTI01000027.1| 29026 30144 1 + 1119 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65928.peg.447 CDS gi|559755590|gb|AYTI01000027.1| 30151 32724 1 + 2574 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.65928.peg.448 CDS gi|559755590|gb|AYTI01000027.1| 33301 32774 -1 - 528 Protein yceI precursor - none -
fig|6666666.65928.peg.449 CDS gi|559755591|gb|AYTI01000026.1| 137 1030 2 + 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65928.peg.450 CDS gi|559755591|gb|AYTI01000026.1| 1209 1084 -3 - 126 hypothetical protein - none -
fig|6666666.65928.peg.451 CDS gi|559755591|gb|AYTI01000026.1| 1442 3568 2 + 2127 Protease II (EC 3.4.21.83) - none -
fig|6666666.65928.peg.452 CDS gi|559755591|gb|AYTI01000026.1| 3565 4038 1 + 474 Putative glutathione peroxidase - none -
fig|6666666.65928.peg.453 CDS gi|559755591|gb|AYTI01000026.1| 5092 5331 1 + 240 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65928.peg.454 CDS gi|559755591|gb|AYTI01000026.1| 5332 6003 1 + 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65928.peg.455 CDS gi|559755591|gb|AYTI01000026.1| 6018 8318 3 + 2301 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65928.peg.456 CDS gi|559755591|gb|AYTI01000026.1| 8457 9134 3 + 678 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.65928.peg.457 CDS gi|559755591|gb|AYTI01000026.1| 10182 9160 -3 - 1023 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65928.peg.458 CDS gi|559755591|gb|AYTI01000026.1| 10647 10222 -3 - 426 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65928.peg.459 CDS gi|559755591|gb|AYTI01000026.1| 10786 10905 1 + 120 hypothetical protein - none -
fig|6666666.65928.peg.460 CDS gi|559755591|gb|AYTI01000026.1| 11049 11189 3 + 141 hypothetical protein - none -
fig|6666666.65928.peg.461 CDS gi|559755592|gb|AYTI01000025.1| 199 2205 1 + 2007 PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.65928.peg.462 CDS gi|559755592|gb|AYTI01000025.1| 2268 4571 3 + 2304 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65928.peg.463 CDS gi|559755592|gb|AYTI01000025.1| 4759 5100 1 + 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65928.peg.464 CDS gi|559755592|gb|AYTI01000025.1| 5344 6123 1 + 780 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65928.peg.465 CDS gi|559755592|gb|AYTI01000025.1| 6133 6855 1 + 723 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.65928.peg.466 CDS gi|559755592|gb|AYTI01000025.1| 6860 7165 2 + 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65928.peg.467 CDS gi|559755592|gb|AYTI01000025.1| 8013 7180 -3 - 834 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.65928.peg.468 CDS gi|559755592|gb|AYTI01000025.1| 9158 8016 -2 - 1143 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65928.peg.469 CDS gi|559755592|gb|AYTI01000025.1| 9947 9159 -2 - 789 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65928.peg.470 CDS gi|559755592|gb|AYTI01000025.1| 10151 9948 -2 - 204 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.65928.peg.471 CDS gi|559755592|gb|AYTI01000025.1| 11325 10165 -3 - 1161 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65928.peg.472 CDS gi|559755592|gb|AYTI01000025.1| 11927 11316 -2 - 612 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Thiamin biosynthesis
fig|6666666.65928.peg.473 CDS gi|559755592|gb|AYTI01000025.1| 13723 12014 -1 - 1710 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.65928.peg.474 CDS gi|559755592|gb|AYTI01000025.1| 14196 14597 3 + 402 hypothetical protein - none -
fig|6666666.65928.peg.475 CDS gi|559755592|gb|AYTI01000025.1| 14584 16134 1 + 1551 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65928.peg.476 CDS gi|559755592|gb|AYTI01000025.1| 16131 17291 3 + 1161 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65928.peg.477 CDS gi|559755592|gb|AYTI01000025.1| 17618 18499 2 + 882 Tyrosine recombinase XerC - none -
fig|6666666.65928.peg.478 CDS gi|559755592|gb|AYTI01000025.1| 19037 18507 -2 - 531 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.65928.peg.479 CDS gi|559755592|gb|AYTI01000025.1| 19408 20238 1 + 831 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.65928.peg.480 CDS gi|559755592|gb|AYTI01000025.1| 20532 21359 3 + 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65928.peg.481 CDS gi|559755592|gb|AYTI01000025.1| 21764 22495 2 + 732 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65928.peg.482 CDS gi|559755592|gb|AYTI01000025.1| 22626 23183 3 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65928.peg.483 CDS gi|559755592|gb|AYTI01000025.1| 23367 24245 3 + 879 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.484 CDS gi|559755592|gb|AYTI01000025.1| 24740 24312 -2 - 429 FIG00994532: hypothetical protein - none -
fig|6666666.65928.peg.485 CDS gi|559755592|gb|AYTI01000025.1| 24883 26073 1 + 1191 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) - none -
fig|6666666.65928.peg.486 CDS gi|559755592|gb|AYTI01000025.1| 26609 26184 -2 - 426 hypothetical membrane protein - none -
fig|6666666.65928.peg.487 CDS gi|559755592|gb|AYTI01000025.1| 26666 26779 2 + 114 hypothetical protein - none -
fig|6666666.65928.peg.488 CDS gi|559755592|gb|AYTI01000025.1| 27166 28332 1 + 1167 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65928.peg.489 CDS gi|559755592|gb|AYTI01000025.1| 28387 28680 1 + 294 Membrane-associated zinc metalloprotease - none -
fig|6666666.65928.peg.490 CDS gi|559755592|gb|AYTI01000025.1| 28683 29600 3 + 918 Membrane-associated zinc metalloprotease - none -
fig|6666666.65928.peg.491 CDS gi|559755592|gb|AYTI01000025.1| 29597 29713 2 + 117 hypothetical protein - none -
fig|6666666.65928.peg.492 CDS gi|559755592|gb|AYTI01000025.1| 29766 30941 3 + 1176 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65928.peg.493 CDS gi|559755592|gb|AYTI01000025.1| 31010 32938 2 + 1929 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.494 CDS gi|559755592|gb|AYTI01000025.1| 33009 33902 3 + 894 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65928.peg.495 CDS gi|559755592|gb|AYTI01000025.1| 33965 35419 2 + 1455 Cobyric acid synthase - none -
fig|6666666.65928.peg.496 CDS gi|559755592|gb|AYTI01000025.1| 36264 35428 -3 - 837 hypothetical protein - none -
fig|6666666.65928.peg.497 CDS gi|559755592|gb|AYTI01000025.1| 38035 36644 -1 - 1392 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65928.peg.498 CDS gi|559755592|gb|AYTI01000025.1| 39353 38361 -2 - 993 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65928.peg.499 CDS gi|559755592|gb|AYTI01000025.1| 39897 40037 3 + 141 hypothetical protein - none -
fig|6666666.65928.peg.500 CDS gi|559755592|gb|AYTI01000025.1| 40040 41539 2 + 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65928.peg.501 CDS gi|559755592|gb|AYTI01000025.1| 41653 42747 1 + 1095 ChlI component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.65928.peg.502 CDS gi|559755592|gb|AYTI01000025.1| 42998 43504 2 + 507 ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.65928.peg.503 CDS gi|559755592|gb|AYTI01000025.1| 43601 44221 2 + 621 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Cobalamin synthesis
fig|6666666.65928.peg.504 CDS gi|559755592|gb|AYTI01000025.1| 44215 45588 1 + 1374 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis
fig|6666666.65928.peg.505 CDS gi|559755592|gb|AYTI01000025.1| 45575 46138 2 + 564 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65928.peg.506 CDS gi|559755592|gb|AYTI01000025.1| 46179 47294 3 + 1116 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis);
Zinc regulated enzymes
fig|6666666.65928.peg.507 CDS gi|559755592|gb|AYTI01000025.1| 48725 47322 -2 - 1404 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.65928.peg.508 CDS gi|559755592|gb|AYTI01000025.1| 48793 49560 1 + 768 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.509 CDS gi|559755592|gb|AYTI01000025.1| 50370 49627 -3 - 744 UPF0246 protein YaaA - none -
fig|6666666.65928.peg.510 CDS gi|559755592|gb|AYTI01000025.1| 50397 52154 3 + 1758 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65928.peg.511 CDS gi|559755592|gb|AYTI01000025.1| 53223 52249 -3 - 975 FIG00544866: hypothetical protein - none -
fig|6666666.65928.peg.512 CDS gi|559755592|gb|AYTI01000025.1| 53222 53776 2 + 555 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.65928.peg.513 CDS gi|559755592|gb|AYTI01000025.1| 53773 54771 1 + 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65928.peg.514 CDS gi|559755592|gb|AYTI01000025.1| 55047 55421 3 + 375 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65928.peg.515 CDS gi|559755593|gb|AYTI01000024.1| 97 309 1 + 213 hypothetical protein - none -
fig|6666666.65928.peg.516 CDS gi|559755593|gb|AYTI01000024.1| 2140 509 -1 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.517 CDS gi|559755593|gb|AYTI01000024.1| 2730 2251 -3 - 480 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65928.peg.518 CDS gi|559755593|gb|AYTI01000024.1| 3176 2727 -2 - 450 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65928.peg.519 CDS gi|559755593|gb|AYTI01000024.1| 4462 3173 -1 - 1290 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.65928.peg.520 CDS gi|559755593|gb|AYTI01000024.1| 5208 4459 -3 - 750 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65928.peg.521 CDS gi|559755593|gb|AYTI01000024.1| 6512 5331 -2 - 1182 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65928.peg.522 CDS gi|559755593|gb|AYTI01000024.1| 7972 6518 -1 - 1455 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65928.peg.523 CDS gi|559755593|gb|AYTI01000024.1| 8766 7969 -3 - 798 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65928.peg.524 CDS gi|559755593|gb|AYTI01000024.1| 9087 10925 3 + 1839 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65928.peg.525 CDS gi|559755593|gb|AYTI01000024.1| 10944 11900 3 + 957 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65928.peg.526 CDS gi|559755593|gb|AYTI01000024.1| 11902 12702 1 + 801 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65928.peg.527 CDS gi|559755593|gb|AYTI01000024.1| 13161 13796 3 + 636 Cytochrome oxidase assembly protein - none -
fig|6666666.65928.peg.528 CDS gi|559755593|gb|AYTI01000024.1| 14869 13937 -1 - 933 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65928.peg.529 CDS gi|559755593|gb|AYTI01000024.1| 15231 17324 3 + 2094 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65928.peg.530 CDS gi|559755593|gb|AYTI01000024.1| 17439 18521 3 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.65928.peg.531 CDS gi|559755593|gb|AYTI01000024.1| 18683 20290 2 + 1608 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65928.peg.532 CDS gi|559755593|gb|AYTI01000024.1| 20353 21312 1 + 960 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65928.peg.533 CDS gi|559755593|gb|AYTI01000024.1| 21331 22041 1 + 711 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65928.peg.534 CDS gi|559755593|gb|AYTI01000024.1| 22342 22106 -1 - 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65928.peg.535 CDS gi|559755593|gb|AYTI01000024.1| 25270 22451 -1 - 2820 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Fermentations: Mixed acid;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65928.peg.536 CDS gi|559755593|gb|AYTI01000024.1| 26165 25386 -2 - 780 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.537 CDS gi|559755593|gb|AYTI01000024.1| 27550 26279 -1 - 1272 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.538 CDS gi|559755593|gb|AYTI01000024.1| 28664 27660 -2 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65928.peg.539 CDS gi|559755593|gb|AYTI01000024.1| 30038 29049 -2 - 990 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65928.peg.540 CDS gi|559755593|gb|AYTI01000024.1| 31178 30150 -2 - 1029 Hypothetical protein UPF0052 - none -
fig|6666666.65928.peg.541 CDS gi|559755593|gb|AYTI01000024.1| 32055 31192 -3 - 864 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.65928.peg.542 CDS gi|559755593|gb|AYTI01000024.1| 33600 32179 -3 - 1422 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65928.peg.543 CDS gi|559755593|gb|AYTI01000024.1| 34781 34215 -2 - 567 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65928.peg.544 CDS gi|559755593|gb|AYTI01000024.1| 35447 34974 -2 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.65928.peg.545 CDS gi|559755593|gb|AYTI01000024.1| 36812 35460 -2 - 1353 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65928.peg.546 CDS gi|559755593|gb|AYTI01000024.1| 37464 36823 -3 - 642 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65928.peg.547 CDS gi|559755593|gb|AYTI01000024.1| 37507 37644 1 + 138 hypothetical protein - none -
fig|6666666.65928.peg.548 CDS gi|559755593|gb|AYTI01000024.1| 38685 37600 -3 - 1086 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65928.peg.549 CDS gi|559755593|gb|AYTI01000024.1| 39349 38675 -1 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65928.peg.550 CDS gi|559755593|gb|AYTI01000024.1| 40947 39433 -3 - 1515 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.65928.peg.551 CDS gi|559755593|gb|AYTI01000024.1| 41885 40944 -2 - 942 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.65928.peg.552 CDS gi|559755593|gb|AYTI01000024.1| 42437 41928 -2 - 510 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65928.peg.553 CDS gi|559755593|gb|AYTI01000024.1| 44610 42565 -3 - 2046 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65928.peg.554 CDS gi|559755593|gb|AYTI01000024.1| 45906 44677 -3 - 1230 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis
fig|6666666.65928.peg.555 CDS gi|559755593|gb|AYTI01000024.1| 47337 46090 -3 - 1248 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65928.peg.556 CDS gi|559755593|gb|AYTI01000024.1| 47721 47434 -3 - 288 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65928.peg.557 CDS gi|559755593|gb|AYTI01000024.1| 48409 47834 -1 - 576 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65928.peg.558 CDS gi|559755593|gb|AYTI01000024.1| 48736 48413 -1 - 324 integration host factor - none -
fig|6666666.65928.peg.559 CDS gi|559755593|gb|AYTI01000024.1| 49928 49089 -2 - 840 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.65928.peg.560 CDS gi|559755593|gb|AYTI01000024.1| 53297 49935 -2 - 3363 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65928.peg.561 CDS gi|559755593|gb|AYTI01000024.1| 54551 53319 -2 - 1233 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65928.peg.562 CDS gi|559755593|gb|AYTI01000024.1| 56011 54653 -1 - 1359 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis;
Zinc regulated enzymes
fig|6666666.65928.peg.563 CDS gi|559755593|gb|AYTI01000024.1| 56970 56029 -3 - 942 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.65928.peg.564 CDS gi|559755593|gb|AYTI01000024.1| 57545 56973 -2 - 573 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.65928.peg.565 CDS gi|559755593|gb|AYTI01000024.1| 58125 59333 3 + 1209 Cell division inhibitor Persister Cells
fig|6666666.65928.peg.566 CDS gi|559755593|gb|AYTI01000024.1| 59508 59981 3 + 474 FIG00544983: hypothetical protein - none -
fig|6666666.65928.peg.567 CDS gi|559755593|gb|AYTI01000024.1| 59974 60399 1 + 426 hypothetical protein - none -
fig|6666666.65928.peg.568 CDS gi|559755593|gb|AYTI01000024.1| 61126 60485 -1 - 642 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65928.peg.569 CDS gi|559755593|gb|AYTI01000024.1| 61698 61135 -3 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65928.peg.570 CDS gi|559755593|gb|AYTI01000024.1| 62953 61859 -1 - 1095 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65928.peg.571 CDS gi|559755593|gb|AYTI01000024.1| 63471 63031 -3 - 441 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65928.peg.572 CDS gi|559755593|gb|AYTI01000024.1| 64553 63474 -2 - 1080 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65928.peg.573 CDS gi|559755593|gb|AYTI01000024.1| 65200 64604 -1 - 597 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65928.peg.574 CDS gi|559755593|gb|AYTI01000024.1| 66423 65209 -3 - 1215 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65928.peg.575 CDS gi|559755593|gb|AYTI01000024.1| 66832 66506 -1 - 327 putative signal peptidase, membrane protein, cleaves prepilin-like proteins - none -
fig|6666666.65928.peg.576 CDS gi|559755593|gb|AYTI01000024.1| 67970 67095 -2 - 876 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65928.peg.577 CDS gi|559755593|gb|AYTI01000024.1| 69233 68085 -2 - 1149 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65928.peg.578 CDS gi|559755593|gb|AYTI01000024.1| 69830 69237 -2 - 594 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65928.peg.579 CDS gi|559755593|gb|AYTI01000024.1| 72869 70197 -2 - 2673 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65928.peg.580 CDS gi|559755593|gb|AYTI01000024.1| 74439 73102 -3 - 1338 ATPase, AAA family - none -
fig|6666666.65928.peg.581 CDS gi|559755593|gb|AYTI01000024.1| 75957 74626 -3 - 1332 FIG00995901: hypothetical protein - none -
fig|6666666.65928.peg.582 CDS gi|559755593|gb|AYTI01000024.1| 77887 76094 -1 - 1794 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65928.peg.583 CDS gi|559755593|gb|AYTI01000024.1| 78206 79081 2 + 876 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65928.peg.584 CDS gi|559755593|gb|AYTI01000024.1| 81884 79125 -2 - 2760 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.65928.peg.585 CDS gi|559755593|gb|AYTI01000024.1| 83941 81920 -1 - 2022 Putative membrane protein - none -
fig|6666666.65928.peg.586 CDS gi|559755593|gb|AYTI01000024.1| 84565 83984 -1 - 582 No significant database matches - none -
fig|6666666.65928.peg.587 CDS gi|559755593|gb|AYTI01000024.1| 84591 84935 3 + 345 hypothetical protein - none -
fig|6666666.65928.peg.588 CDS gi|559755593|gb|AYTI01000024.1| 84913 85515 1 + 603 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.589 CDS gi|559755593|gb|AYTI01000024.1| 85503 86039 3 + 537 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.65928.peg.590 CDS gi|559755593|gb|AYTI01000024.1| 86269 87675 1 + 1407 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65928.peg.591 CDS gi|559755593|gb|AYTI01000024.1| 87669 87782 3 + 114 hypothetical protein - none -
fig|6666666.65928.peg.592 CDS gi|559755593|gb|AYTI01000024.1| 88971 87742 -3 - 1230 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65928.peg.593 CDS gi|559755593|gb|AYTI01000024.1| 89734 89096 -1 - 639 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.65928.peg.594 CDS gi|559755593|gb|AYTI01000024.1| 90318 89794 -3 - 525 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.65928.peg.595 CDS gi|559755593|gb|AYTI01000024.1| 90503 91357 2 + 855 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65928.peg.596 CDS gi|559755593|gb|AYTI01000024.1| 91754 92014 2 + 261 hypothetical protein - none -
fig|6666666.65928.peg.597 CDS gi|559755593|gb|AYTI01000024.1| 94467 92176 -3 - 2292 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65928.peg.598 CDS gi|559755593|gb|AYTI01000024.1| 95088 94531 -3 - 558 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65928.peg.599 CDS gi|559755593|gb|AYTI01000024.1| 95214 95092 -3 - 123 hypothetical protein - none -
fig|6666666.65928.peg.600 CDS gi|559755593|gb|AYTI01000024.1| 96886 95246 -1 - 1641 dipeptide-binding protein DciAE - none -
fig|6666666.65928.peg.601 CDS gi|559755594|gb|AYTI01000023.1| 678 842 3 + 165 hypothetical protein - none -
fig|6666666.65928.peg.602 CDS gi|559755594|gb|AYTI01000023.1| 820 1047 1 + 228 hypothetical protein - none -
fig|6666666.65928.peg.603 CDS gi|559755594|gb|AYTI01000023.1| 1111 1368 1 + 258 hypothetical protein - none -
fig|6666666.65928.peg.604 CDS gi|559755594|gb|AYTI01000023.1| 1374 2327 3 + 954 hypothetical protein - none -
fig|6666666.65928.peg.605 CDS gi|559755594|gb|AYTI01000023.1| 2391 2909 3 + 519 hypothetical protein - none -
fig|6666666.65928.peg.606 CDS gi|559755594|gb|AYTI01000023.1| 3175 3312 1 + 138 hypothetical protein - none -
fig|6666666.65928.peg.607 CDS gi|559755594|gb|AYTI01000023.1| 3457 3843 1 + 387 hypothetical protein - none -
fig|6666666.65928.peg.608 CDS gi|559755594|gb|AYTI01000023.1| 5843 3918 -2 - 1926 hypothetical protein - none -
fig|6666666.65928.peg.609 CDS gi|559755594|gb|AYTI01000023.1| 6490 6633 1 + 144 hypothetical protein - none -
fig|6666666.65928.peg.610 CDS gi|559755594|gb|AYTI01000023.1| 7581 6892 -3 - 690 hypothetical protein - none -
fig|6666666.65928.peg.611 CDS gi|559755594|gb|AYTI01000023.1| 7556 7726 2 + 171 hypothetical protein - none -
fig|6666666.65928.peg.612 CDS gi|559755594|gb|AYTI01000023.1| 8252 7716 -2 - 537 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.65928.peg.613 CDS gi|559755594|gb|AYTI01000023.1| 8329 9033 1 + 705 FIG00545776: hypothetical protein - none -
fig|6666666.65928.peg.614 CDS gi|559755594|gb|AYTI01000023.1| 9892 9119 -1 - 774 Inositol transport system ATP-binding protein - none -
fig|6666666.65928.peg.615 CDS gi|559755594|gb|AYTI01000023.1| 10975 9893 -1 - 1083 Probable ABC transport protein, membrane component - none -
fig|6666666.65928.peg.616 CDS gi|559755594|gb|AYTI01000023.1| 11817 10972 -3 - 846 Inositol transport system sugar-binding protein - none -
fig|6666666.65928.peg.617 CDS gi|559755594|gb|AYTI01000023.1| 13133 12606 -2 - 528 hypothetical protein - none -
fig|6666666.65928.peg.618 CDS gi|559755594|gb|AYTI01000023.1| 14163 13459 -3 - 705 hypothetical protein - none -
fig|6666666.65928.peg.619 CDS gi|559755594|gb|AYTI01000023.1| 15016 14672 -1 - 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65928.peg.620 CDS gi|559755594|gb|AYTI01000023.1| 17580 15016 -3 - 2565 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65928.peg.621 CDS gi|559755594|gb|AYTI01000023.1| 17748 17957 3 + 210 Prevent host death protein, Phd antitoxin # A - none -
fig|6666666.65928.peg.622 CDS gi|559755594|gb|AYTI01000023.1| 17957 18220 2 + 264 hypothetical protein - none -
fig|6666666.65928.peg.623 CDS gi|559755594|gb|AYTI01000023.1| 18565 18999 1 + 435 FIG00544172: hypothetical protein - none -
fig|6666666.65928.peg.625 CDS gi|559755596|gb|AYTI01000021.1| 1670 186 -2 - 1485 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65928.peg.626 CDS gi|559755596|gb|AYTI01000021.1| 2543 1815 -2 - 729 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65928.peg.627 CDS gi|559755596|gb|AYTI01000021.1| 3133 2540 -1 - 594 putative ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.628 CDS gi|559755596|gb|AYTI01000021.1| 3998 3177 -2 - 822 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65928.peg.629 CDS gi|559755596|gb|AYTI01000021.1| 4963 4001 -1 - 963 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65928.peg.630 CDS gi|559755596|gb|AYTI01000021.1| 5768 5028 -2 - 741 hypothetical protein - none -
fig|6666666.65928.peg.631 CDS gi|559755596|gb|AYTI01000021.1| 8297 6888 -2 - 1410 Conserved hypothetical exported protein - none -
fig|6666666.65928.peg.632 CDS gi|559755596|gb|AYTI01000021.1| 8523 8410 -3 - 114 hypothetical protein - none -
fig|6666666.65928.peg.633 CDS gi|559755596|gb|AYTI01000021.1| 9965 8832 -2 - 1134 FIG00549071: hypothetical protein - none -
fig|6666666.65928.peg.634 CDS gi|559755596|gb|AYTI01000021.1| 11663 10236 -2 - 1428 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65928.peg.635 CDS gi|559755596|gb|AYTI01000021.1| 11753 12871 2 + 1119 Isochorismate synthase (EC 5.4.4.2) of siderophore biosynthesis Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65928.peg.636 CDS gi|559755596|gb|AYTI01000021.1| 13546 12878 -1 - 669 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65928.peg.637 CDS gi|559755596|gb|AYTI01000021.1| 14424 13609 -3 - 816 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65928.peg.638 CDS gi|559755596|gb|AYTI01000021.1| 14864 14526 -2 - 339 Putative integral membrane protein - none -
fig|6666666.65928.peg.639 CDS gi|559755596|gb|AYTI01000021.1| 15538 14927 -1 - 612 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65928.peg.640 CDS gi|559755596|gb|AYTI01000021.1| 17418 15538 -3 - 1881 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65928.peg.641 CDS gi|559755596|gb|AYTI01000021.1| 18547 17528 -1 - 1020 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65928.peg.642 CDS gi|559755596|gb|AYTI01000021.1| 20366 18771 -2 - 1596 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65928.peg.643 CDS gi|559755596|gb|AYTI01000021.1| 22077 20521 -3 - 1557 hypothetical protein - none -
fig|6666666.65928.peg.644 CDS gi|559755596|gb|AYTI01000021.1| 23951 22137 -2 - 1815 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.65928.peg.645 CDS gi|559755596|gb|AYTI01000021.1| 25062 24073 -3 - 990 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65928.peg.646 CDS gi|559755596|gb|AYTI01000021.1| 25232 25960 2 + 729 Putative membrane-anchored protein - none -
fig|6666666.65928.peg.647 CDS gi|559755596|gb|AYTI01000021.1| 27052 26039 -1 - 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65928.peg.648 CDS gi|559755596|gb|AYTI01000021.1| 27710 27192 -2 - 519 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65928.peg.649 CDS gi|559755596|gb|AYTI01000021.1| 29651 27720 -2 - 1932 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65928.peg.650 CDS gi|559755596|gb|AYTI01000021.1| 30079 31761 1 + 1683 FIG00544780: hypothetical protein - none -
fig|6666666.65928.peg.651 CDS gi|559755596|gb|AYTI01000021.1| 31824 32375 3 + 552 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65928.peg.652 CDS gi|559755596|gb|AYTI01000021.1| 32590 34431 1 + 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65928.peg.653 CDS gi|559755596|gb|AYTI01000021.1| 36008 34500 -2 - 1509 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.65928.peg.654 CDS gi|559755596|gb|AYTI01000021.1| 36919 36098 -1 - 822 hypothetical protein - none -
fig|6666666.65928.peg.655 CDS gi|559755596|gb|AYTI01000021.1| 36952 38169 1 + 1218 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.65928.peg.656 CDS gi|559755596|gb|AYTI01000021.1| 39067 38177 -1 - 891 lysine export regulator protein - none -
fig|6666666.65928.peg.657 CDS gi|559755596|gb|AYTI01000021.1| 39138 39350 3 + 213 lysine exporter protein - none -
fig|6666666.65928.peg.658 CDS gi|559755596|gb|AYTI01000021.1| 39434 39871 2 + 438 lysine exporter protein - none -
fig|6666666.65928.peg.659 CDS gi|559755596|gb|AYTI01000021.1| 41035 39920 -1 - 1116 Putative aldo/keto-reductase family protein - none -
fig|6666666.65928.peg.660 CDS gi|559755596|gb|AYTI01000021.1| 42720 41215 -3 - 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65928.peg.661 CDS gi|559755596|gb|AYTI01000021.1| 42875 42732 -2 - 144 hypothetical protein - none -
fig|6666666.65928.peg.662 CDS gi|559755596|gb|AYTI01000021.1| 43911 42883 -3 - 1029 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.663 CDS gi|559755596|gb|AYTI01000021.1| 44196 44053 -3 - 144 hypothetical protein - none -
fig|6666666.65928.peg.664 CDS gi|559755596|gb|AYTI01000021.1| 44971 44417 -1 - 555 hypothetical protein - none -
fig|6666666.65928.peg.665 CDS gi|559755596|gb|AYTI01000021.1| 46181 45114 -2 - 1068 Putative iron transport system exported solute-binding component - none -
fig|6666666.65928.peg.666 CDS gi|559755596|gb|AYTI01000021.1| 46888 46211 -1 - 678 Putative iron ABC transport system, ATP-binding protein - none -
fig|6666666.65928.peg.667 CDS gi|559755596|gb|AYTI01000021.1| 48026 46980 -2 - 1047 ABC transporter (iron.B12.siderophore.hemin) , permease component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65928.peg.668 CDS gi|559755596|gb|AYTI01000021.1| 48412 48278 -1 - 135 hypothetical protein - none -
fig|6666666.65928.peg.669 CDS gi|559755596|gb|AYTI01000021.1| 48399 48719 3 + 321 Conserved putative integral membrane protein - none -
fig|6666666.65928.peg.670 CDS gi|559755596|gb|AYTI01000021.1| 50198 48750 -2 - 1449 permease of the major facilitator superfamily - none -
fig|6666666.65928.peg.671 CDS gi|559755596|gb|AYTI01000021.1| 50367 50918 3 + 552 Putative acetyltransferase - none -
fig|6666666.65928.peg.672 CDS gi|559755596|gb|AYTI01000021.1| 52520 51036 -2 - 1485 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65928.peg.673 CDS gi|559755596|gb|AYTI01000021.1| 52819 52526 -1 - 294 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65928.peg.674 CDS gi|559755596|gb|AYTI01000021.1| 53219 53881 2 + 663 FIG01000629: hypothetical protein - none -
fig|6666666.65928.peg.675 CDS gi|559755596|gb|AYTI01000021.1| 54197 53928 -2 - 270 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65928.peg.676 CDS gi|559755596|gb|AYTI01000021.1| 56026 54200 -1 - 1827 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65928.peg.677 CDS gi|559755596|gb|AYTI01000021.1| 56084 56782 2 + 699 FIG00544413: hypothetical protein - none -
fig|6666666.65928.peg.678 CDS gi|559755596|gb|AYTI01000021.1| 57777 56806 -3 - 972 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.65928.peg.679 CDS gi|559755596|gb|AYTI01000021.1| 58919 57795 -2 - 1125 tRNA-specific 2-thiouridylase MnmA - none -
fig|6666666.65928.peg.680 CDS gi|559755596|gb|AYTI01000021.1| 59038 59907 1 + 870 Spermidine synthase-like protein - none -
fig|6666666.65928.peg.681 CDS gi|559755596|gb|AYTI01000021.1| 61031 59904 -2 - 1128 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65928.peg.682 CDS gi|559755596|gb|AYTI01000021.1| 62108 61152 -2 - 957 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.65928.peg.683 CDS gi|559755596|gb|AYTI01000021.1| 62923 62129 -1 - 795 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.65928.peg.684 CDS gi|559755596|gb|AYTI01000021.1| 64252 63041 -1 - 1212 SAM-dependent methyltransferase - none -
fig|6666666.65928.peg.685 CDS gi|559755596|gb|AYTI01000021.1| 64980 64270 -3 - 711 FIG00996530: hypothetical protein - none -
fig|6666666.65928.peg.686 CDS gi|559755597|gb|AYTI01000020.1| 1368 364 -3 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65928.peg.687 CDS gi|559755597|gb|AYTI01000020.1| 1464 2039 3 + 576 FIG00547295: hypothetical protein - none -
fig|6666666.65928.peg.688 CDS gi|559755597|gb|AYTI01000020.1| 2759 2034 -2 - 726 Transcriptional regulator, IclR family - none -
fig|6666666.65928.peg.689 CDS gi|559755597|gb|AYTI01000020.1| 2837 4285 2 + 1449 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65928.peg.690 CDS gi|559755597|gb|AYTI01000020.1| 4292 4882 2 + 591 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65928.peg.691 CDS gi|559755597|gb|AYTI01000020.1| 5892 4891 -3 - 1002 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65928.peg.692 CDS gi|559755597|gb|AYTI01000020.1| 6116 7255 2 + 1140 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.693 CDS gi|559755597|gb|AYTI01000020.1| 7273 8361 1 + 1089 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65928.peg.694 CDS gi|559755597|gb|AYTI01000020.1| 9408 8440 -3 - 969 Putative exported protein - none -
fig|6666666.65928.peg.695 CDS gi|559755597|gb|AYTI01000020.1| 9525 10505 3 + 981 Thiamine-monophosphate kinase (EC 2.7.4.16) Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65928.peg.696 CDS gi|559755597|gb|AYTI01000020.1| 10558 11277 1 + 720 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65928.peg.697 CDS gi|559755597|gb|AYTI01000020.1| 11289 13001 3 + 1713 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.698 CDS gi|559755597|gb|AYTI01000020.1| 13005 15119 3 + 2115 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65928.peg.699 CDS gi|559755597|gb|AYTI01000020.1| 15198 15410 3 + 213 Pyruvate carboxylase, C-terminal domain/subunit (EC 2.1.3.1) - none -
fig|6666666.65928.peg.700 CDS gi|559755597|gb|AYTI01000020.1| 15411 15989 3 + 579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.65928.peg.701 CDS gi|559755597|gb|AYTI01000020.1| 16047 16535 3 + 489 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.65928.peg.702 CDS gi|559755597|gb|AYTI01000020.1| 16634 17377 2 + 744 FIG00543922: hypothetical protein - none -
fig|6666666.65928.peg.703 CDS gi|559755597|gb|AYTI01000020.1| 17401 18219 1 + 819 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.65928.peg.704 CDS gi|559755597|gb|AYTI01000020.1| 19048 18281 -1 - 768 ATP-binding protein - none -
fig|6666666.65928.peg.705 CDS gi|559755597|gb|AYTI01000020.1| 20007 19051 -3 - 957 putative amino acid ABC transporter permease protein - none -
fig|6666666.65928.peg.706 CDS gi|559755597|gb|AYTI01000020.1| 20952 20053 -3 - 900 Putative secreted protein - none -
fig|6666666.65928.peg.707 CDS gi|559755597|gb|AYTI01000020.1| 22049 21108 -2 - 942 Putative membrane protein - none -
fig|6666666.65928.peg.708 CDS gi|559755597|gb|AYTI01000020.1| 22048 22194 1 + 147 hypothetical protein - none -
fig|6666666.65928.peg.709 CDS gi|559755597|gb|AYTI01000020.1| 25054 22418 -1 - 2637 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65928.peg.710 CDS gi|559755597|gb|AYTI01000020.1| 26334 25546 -3 - 789 SAM-dependent methyltransferases - none -
fig|6666666.65928.peg.711 CDS gi|559755597|gb|AYTI01000020.1| 26575 28038 1 + 1464 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.65928.peg.712 CDS gi|559755597|gb|AYTI01000020.1| 28371 28499 3 + 129 hypothetical protein - none -
fig|6666666.65928.peg.713 CDS gi|559755597|gb|AYTI01000020.1| 29270 31282 2 + 2013 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.65928.peg.714 CDS gi|559755597|gb|AYTI01000020.1| 31384 31998 1 + 615 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65928.peg.715 CDS gi|559755597|gb|AYTI01000020.1| 32139 33377 3 + 1239 Radical SAM domain heme biosynthesis protein - none -
fig|6666666.65928.peg.716 CDS gi|559755597|gb|AYTI01000020.1| 33422 35521 2 + 2100 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65928.peg.717 CDS gi|559755597|gb|AYTI01000020.1| 35890 36330 1 + 441 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65928.peg.718 CDS gi|559755597|gb|AYTI01000020.1| 38727 36394 -3 - 2334 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65928.peg.719 CDS gi|559755597|gb|AYTI01000020.1| 39782 38937 -2 - 846 FIG00995839: hypothetical protein - none -
fig|6666666.65928.peg.720 CDS gi|559755597|gb|AYTI01000020.1| 40640 40035 -2 - 606 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65928.peg.721 CDS gi|559755597|gb|AYTI01000020.1| 40925 43789 2 + 2865 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65928.peg.722 CDS gi|559755597|gb|AYTI01000020.1| 44193 44639 3 + 447 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65928.peg.723 CDS gi|559755597|gb|AYTI01000020.1| 44672 44866 2 + 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65928.peg.724 CDS gi|559755597|gb|AYTI01000020.1| 44929 45312 1 + 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65928.peg.725 CDS gi|559755597|gb|AYTI01000020.1| 46101 45493 -3 - 609 hypothetical protein - none -
fig|6666666.65928.peg.726 CDS gi|559755597|gb|AYTI01000020.1| 46241 47053 2 + 813 FIG011178: rRNA methylase - none -
fig|6666666.65928.peg.727 CDS gi|559755597|gb|AYTI01000020.1| 47222 48277 2 + 1056 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65928.peg.728 CDS gi|559755597|gb|AYTI01000020.1| 48328 50838 1 + 2511 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65928.peg.729 CDS gi|559755597|gb|AYTI01000020.1| 50979 52022 3 + 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65928.peg.730 CDS gi|559755597|gb|AYTI01000020.1| 52074 53234 3 + 1161 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.65928.peg.731 CDS gi|559755597|gb|AYTI01000020.1| 53301 54236 3 + 936 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65928.peg.732 CDS gi|559755597|gb|AYTI01000020.1| 54233 55486 2 + 1254 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65928.peg.733 CDS gi|559755597|gb|AYTI01000020.1| 55504 56514 1 + 1011 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65928.peg.734 CDS gi|559755597|gb|AYTI01000020.1| 56599 57090 1 + 492 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65928.peg.735 CDS gi|559755597|gb|AYTI01000020.1| 57367 58566 1 + 1200 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65928.peg.736 CDS gi|559755597|gb|AYTI01000020.1| 58568 60001 2 + 1434 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65928.peg.737 CDS gi|559755597|gb|AYTI01000020.1| 60120 60305 3 + 186 UPF0434 protein YcaR - none -
fig|6666666.65928.peg.738 CDS gi|559755597|gb|AYTI01000020.1| 60353 61633 2 + 1281 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65928.peg.739 CDS gi|559755598|gb|AYTI01000019.1| 185 1927 2 + 1743 cell wall-associated hydrolase - none -
fig|6666666.65928.peg.740 CDS gi|559755598|gb|AYTI01000019.1| 2071 3201 1 + 1131 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.741 CDS gi|559755598|gb|AYTI01000019.1| 4178 3183 -2 - 996 FIG00546138: hypothetical protein - none -
fig|6666666.65928.peg.742 CDS gi|559755598|gb|AYTI01000019.1| 4218 4832 3 + 615 FIG01000060: hypothetical protein - none -
fig|6666666.65928.peg.743 CDS gi|559755598|gb|AYTI01000019.1| 4883 5311 2 + 429 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.65928.peg.744 CDS gi|559755598|gb|AYTI01000019.1| 5312 6523 2 + 1212 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65928.peg.745 CDS gi|559755598|gb|AYTI01000019.1| 7072 6593 -1 - 480 FIG00545282: hypothetical protein - none -
fig|6666666.65928.peg.746 CDS gi|559755598|gb|AYTI01000019.1| 7955 7254 -2 - 702 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.65928.peg.747 CDS gi|559755598|gb|AYTI01000019.1| 8181 9992 3 + 1812 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.65928.peg.748 CDS gi|559755598|gb|AYTI01000019.1| 9998 12205 2 + 2208 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.65928.peg.749 CDS gi|559755598|gb|AYTI01000019.1| 12282 13385 3 + 1104 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.65928.peg.750 CDS gi|559755598|gb|AYTI01000019.1| 14867 13395 -2 - 1473 putative oxidoreductase - none -
fig|6666666.65928.peg.751 CDS gi|559755598|gb|AYTI01000019.1| 15840 14887 -3 - 954 hypothetical protein - none -
fig|6666666.65928.peg.752 CDS gi|559755598|gb|AYTI01000019.1| 17536 15887 -1 - 1650 ABC transporter, ATP-binding protein - none -
fig|6666666.65928.peg.753 CDS gi|559755598|gb|AYTI01000019.1| 18263 19264 2 + 1002 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK Dihydroxyacetone kinases
fig|6666666.65928.peg.754 CDS gi|559755598|gb|AYTI01000019.1| 19267 19914 1 + 648 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL Dihydroxyacetone kinases
fig|6666666.65928.peg.755 CDS gi|559755598|gb|AYTI01000019.1| 19911 20588 3 + 678 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component / DHA-specific phosphocarrier protein HPr Dihydroxyacetone kinases;
Dihydroxyacetone kinases;
Dihydroxyacetone kinases
fig|6666666.65928.peg.756 CDS gi|559755598|gb|AYTI01000019.1| 20705 21241 2 + 537 Phospholipid-binding protein - none -
fig|6666666.65928.peg.757 CDS gi|559755598|gb|AYTI01000019.1| 21366 21629 3 + 264 FIG00543853: hypothetical protein - none -
fig|6666666.65928.peg.758 CDS gi|559755598|gb|AYTI01000019.1| 21884 22066 2 + 183 hypothetical protein - none -
fig|6666666.65928.peg.759 CDS gi|559755598|gb|AYTI01000019.1| 23135 22089 -2 - 1047 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.65928.peg.760 CDS gi|559755598|gb|AYTI01000019.1| 24283 23243 -1 - 1041 FIG00545923: hypothetical protein - none -
fig|6666666.65928.peg.761 CDS gi|559755598|gb|AYTI01000019.1| 25252 24389 -1 - 864 putative oxidoreductase - none -
fig|6666666.65928.peg.762 CDS gi|559755598|gb|AYTI01000019.1| 25319 26206 2 + 888 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65928.peg.763 CDS gi|559755598|gb|AYTI01000019.1| 26297 27580 2 + 1284 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65928.peg.764 CDS gi|559755598|gb|AYTI01000019.1| 27645 28085 3 + 441 hypothetical protein - none -
fig|6666666.65928.peg.765 CDS gi|559755598|gb|AYTI01000019.1| 28188 31787 3 + 3600 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.65928.peg.766 CDS gi|559755598|gb|AYTI01000019.1| 31900 32559 1 + 660 hypothetical protein - none -
fig|6666666.65928.peg.767 CDS gi|559755598|gb|AYTI01000019.1| 32588 32851 2 + 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65928.peg.768 CDS gi|559755598|gb|AYTI01000019.1| 32867 33712 2 + 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65928.peg.769 CDS gi|559755598|gb|AYTI01000019.1| 34147 35454 1 + 1308 C4-dicarboxylate transporter DcuA - none -
fig|6666666.65928.peg.770 CDS gi|559755598|gb|AYTI01000019.1| 35856 37286 3 + 1431 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65928.peg.771 CDS gi|559755598|gb|AYTI01000019.1| 37411 39060 1 + 1650 Formate--tetrahydrofolate ligase (EC 6.3.4.3) One-carbon metabolism by tetrahydropterines
fig|6666666.65928.peg.772 CDS gi|559755598|gb|AYTI01000019.1| 39386 39117 -2 - 270 Putative virulence-associated protein - none -
fig|6666666.65928.peg.773 CDS gi|559755598|gb|AYTI01000019.1| 40574 39618 -2 - 957 RecB family exonuclease - none -
fig|6666666.65928.peg.774 CDS gi|559755598|gb|AYTI01000019.1| 40663 41982 1 + 1320 aspartyl aminopeptidase - none -
fig|6666666.65928.peg.775 CDS gi|559755598|gb|AYTI01000019.1| 41989 42825 1 + 837 RNA methyltransferase - none -
fig|6666666.65928.peg.776 CDS gi|559755598|gb|AYTI01000019.1| 43015 44595 1 + 1581 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65928.peg.777 CDS gi|559755598|gb|AYTI01000019.1| 44592 46124 3 + 1533 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65928.peg.778 CDS gi|559755598|gb|AYTI01000019.1| 46226 46420 2 + 195 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65928.peg.779 CDS gi|559755598|gb|AYTI01000019.1| 46566 47882 3 + 1317 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65928.peg.780 CDS gi|559755598|gb|AYTI01000019.1| 47879 48868 2 + 990 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65928.peg.781 CDS gi|559755598|gb|AYTI01000019.1| 48868 49857 1 + 990 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65928.peg.782 CDS gi|559755598|gb|AYTI01000019.1| 49896 50180 3 + 285 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65928.peg.783 CDS gi|559755598|gb|AYTI01000019.1| 50288 51376 2 + 1089 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65928.peg.784 CDS gi|559755598|gb|AYTI01000019.1| 51395 54151 2 + 2757 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65928.peg.785 CDS gi|559755598|gb|AYTI01000019.1| 54152 55333 2 + 1182 probable metallopeptidase - none -
fig|6666666.65928.peg.786 CDS gi|559755598|gb|AYTI01000019.1| 55300 56073 1 + 774 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65928.peg.787 CDS gi|559755598|gb|AYTI01000019.1| 56167 56042 -1 - 126 hypothetical protein - none -
fig|6666666.65928.peg.788 CDS gi|559755598|gb|AYTI01000019.1| 56184 57398 3 + 1215 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.65928.peg.789 CDS gi|559755598|gb|AYTI01000019.1| 57407 58180 2 + 774 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis
fig|6666666.65928.peg.790 CDS gi|559755598|gb|AYTI01000019.1| 58168 58899 1 + 732 Cobalt-precorrin-6x reductase (EC 1.3.1.54) Cobalamin synthesis
fig|6666666.65928.peg.791 CDS gi|559755598|gb|AYTI01000019.1| 60362 58902 -2 - 1461 putative gamma-aminobutyrate permease - none -
fig|6666666.65928.peg.792 CDS gi|559755598|gb|AYTI01000019.1| 61890 60625 -3 - 1266 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) / Cobalt-precorrin-3b C17-methyltransferase Cobalamin synthesis;
Cobalamin synthesis
fig|6666666.65928.peg.793 CDS gi|559755598|gb|AYTI01000019.1| 62776 62012 -1 - 765 Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis
fig|6666666.65928.peg.794 CDS gi|559755598|gb|AYTI01000019.1| 63873 62773 -3 - 1101 Cobalamin biosynthesis protein CobG - none -
fig|6666666.65928.peg.795 CDS gi|559755598|gb|AYTI01000019.1| 64366 64247 -1 - 120 hypothetical protein - none -
fig|6666666.65928.peg.796 CDS gi|559755598|gb|AYTI01000019.1| 64430 68008 2 + 3579 CobN component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.65928.peg.797 CDS gi|559755598|gb|AYTI01000019.1| 68114 68644 2 + 531 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65928.peg.798 CDS gi|559755598|gb|AYTI01000019.1| 68805 70361 3 + 1557 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65928.peg.799 CDS gi|559755598|gb|AYTI01000019.1| 70395 71198 3 + 804 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65928.peg.800 CDS gi|559755598|gb|AYTI01000019.1| 71670 71278 -3 - 393 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65928.peg.801 CDS gi|559755598|gb|AYTI01000019.1| 71995 72180 1 + 186 hypothetical protein - none -
fig|6666666.65928.peg.802 CDS gi|559755598|gb|AYTI01000019.1| 72200 72892 2 + 693 Putative secreted protein - none -
fig|6666666.65928.peg.803 CDS gi|559755598|gb|AYTI01000019.1| 72919 73110 1 + 192 hypothetical protein - none -
fig|6666666.65928.peg.804 CDS gi|559755598|gb|AYTI01000019.1| 73457 73215 -2 - 243 hypothetical protein - none -
fig|6666666.65928.peg.805 CDS gi|559755598|gb|AYTI01000019.1| 74572 73592 -1 - 981 sodium-dependent transporter - none -
fig|6666666.65928.peg.806 CDS gi|559755598|gb|AYTI01000019.1| 74708 77650 2 + 2943 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.65928.peg.807 CDS gi|559755598|gb|AYTI01000019.1| 77876 79261 2 + 1386 putative transport protein - none -
fig|6666666.65928.peg.808 CDS gi|559755598|gb|AYTI01000019.1| 80654 79347 -2 - 1308 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65928.peg.809 CDS gi|559755598|gb|AYTI01000019.1| 80827 82185 1 + 1359 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65928.peg.810 CDS gi|559755598|gb|AYTI01000019.1| 82571 82266 -2 - 306 Putative membrane protein - none -
fig|6666666.65928.peg.811 CDS gi|559755598|gb|AYTI01000019.1| 84006 82864 -3 - 1143 Putative membrane protein - none -
fig|6666666.65928.peg.812 CDS gi|559755598|gb|AYTI01000019.1| 84274 83996 -1 - 279 ABC transporter, ATP-binding protein - none -
fig|6666666.65928.peg.813 CDS gi|559755598|gb|AYTI01000019.1| 85710 85141 -3 - 570 FIG00544791: hypothetical protein - none -
fig|6666666.65928.peg.814 CDS gi|559755598|gb|AYTI01000019.1| 85771 86844 1 + 1074 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65928.peg.815 CDS gi|559755598|gb|AYTI01000019.1| 87392 86913 -2 - 480 FIG00544657: hypothetical protein - none -
fig|6666666.65928.peg.816 CDS gi|559755598|gb|AYTI01000019.1| 87609 89114 3 + 1506 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.65928.peg.817 CDS gi|559755598|gb|AYTI01000019.1| 89137 90588 1 + 1452 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65928.peg.818 CDS gi|559755598|gb|AYTI01000019.1| 90604 92004 1 + 1401 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.65928.peg.819 CDS gi|559755598|gb|AYTI01000019.1| 92004 93056 3 + 1053 FIG00546228: hypothetical protein - none -
fig|6666666.65928.peg.820 CDS gi|559755598|gb|AYTI01000019.1| 93059 93946 2 + 888 FIG00997776: hypothetical protein - none -
fig|6666666.65928.peg.821 CDS gi|559755598|gb|AYTI01000019.1| 93972 95414 3 + 1443 Putative secreted protein - none -
fig|6666666.65928.peg.822 CDS gi|559755598|gb|AYTI01000019.1| 96093 95536 -3 - 558 FIG01121957: hypothetical protein - none -
fig|6666666.65928.peg.823 CDS gi|559755598|gb|AYTI01000019.1| 96837 96223 -3 - 615 FIG00544095: hypothetical protein - none -
fig|6666666.65928.peg.824 CDS gi|559755598|gb|AYTI01000019.1| 97610 96855 -2 - 756 FIG01124490: hypothetical protein - none -
fig|6666666.65928.peg.825 CDS gi|559755598|gb|AYTI01000019.1| 98157 97726 -3 - 432 FIG00672531: hypothetical protein - none -
fig|6666666.65928.peg.826 CDS gi|559755598|gb|AYTI01000019.1| 100630 98333 -1 - 2298 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65928.peg.827 CDS gi|559755598|gb|AYTI01000019.1| 100901 100743 -2 - 159 hypothetical protein - none -
fig|6666666.65928.peg.828 CDS gi|559755598|gb|AYTI01000019.1| 101136 102323 3 + 1188 hydrolase of the alpha/beta superfamily - none -
fig|6666666.65928.peg.829 CDS gi|559755598|gb|AYTI01000019.1| 102432 102313 -3 - 120 hypothetical protein - none -
fig|6666666.65928.peg.830 CDS gi|559755598|gb|AYTI01000019.1| 102446 102727 2 + 282 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.65928.peg.831 CDS gi|559755598|gb|AYTI01000019.1| 103520 103257 -2 - 264 hypothetical protein - none -
fig|6666666.65928.peg.832 CDS gi|559755598|gb|AYTI01000019.1| 104921 103632 -2 - 1290 hypothetical protein - none -
fig|6666666.65928.peg.833 CDS gi|559755598|gb|AYTI01000019.1| 108315 104929 -3 - 3387 FIG00545214: hypothetical protein - none -
fig|6666666.65928.peg.834 CDS gi|559755598|gb|AYTI01000019.1| 109158 108337 -3 - 822 Heme transporter analogous to IsdDEF, ATP-binding protein Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.835 CDS gi|559755598|gb|AYTI01000019.1| 110189 109158 -2 - 1032 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.65928.peg.836 CDS gi|559755598|gb|AYTI01000019.1| 111216 110194 -3 - 1023 Putative iron transport system membrane protein - none -
fig|6666666.65928.peg.837 CDS gi|559755598|gb|AYTI01000019.1| 112073 111219 -2 - 855 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.65928.peg.838 CDS gi|559755598|gb|AYTI01000019.1| 114925 112253 -1 - 2673 hypothetical protein - none -
fig|6666666.65928.peg.839 CDS gi|559755598|gb|AYTI01000019.1| 116178 114934 -3 - 1245 hypothetical protein - none -
fig|6666666.65928.peg.840 CDS gi|559755598|gb|AYTI01000019.1| 116416 117261 1 + 846 FIG00545160: hypothetical protein - none -
fig|6666666.65928.peg.841 CDS gi|559755598|gb|AYTI01000019.1| 118740 117355 -3 - 1386 Putative anaerobic c4-dicarboxylate transport protein - none -
fig|6666666.65928.peg.842 CDS gi|559755598|gb|AYTI01000019.1| 118987 118871 -1 - 117 hypothetical protein - none -
fig|6666666.65928.peg.843 CDS gi|559755598|gb|AYTI01000019.1| 120759 119137 -3 - 1623 GTP-binding protein EngA - none -
fig|6666666.65928.peg.844 CDS gi|559755598|gb|AYTI01000019.1| 121468 120749 -1 - 720 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65928.peg.845 CDS gi|559755598|gb|AYTI01000019.1| 122554 121475 -1 - 1080 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65928.peg.846 CDS gi|559755598|gb|AYTI01000019.1| 123359 122652 -2 - 708 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65928.peg.847 CDS gi|559755598|gb|AYTI01000019.1| 124103 123414 -2 - 690 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65928.peg.848 CDS gi|559755598|gb|AYTI01000019.1| 125437 124139 -1 - 1299 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65928.peg.849 CDS gi|559755598|gb|AYTI01000019.1| 125528 127033 2 + 1506 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.65928.peg.850 CDS gi|559755598|gb|AYTI01000019.1| 127691 127086 -2 - 606 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65928.peg.851 CDS gi|559755598|gb|AYTI01000019.1| 128656 127838 -1 - 819 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65928.peg.852 CDS gi|559755598|gb|AYTI01000019.1| 129536 128667 -2 - 870 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65928.peg.853 CDS gi|559755598|gb|AYTI01000019.1| 130697 129765 -2 - 933 Tyrosine recombinase XerD - none -
fig|6666666.65928.peg.854 CDS gi|559755598|gb|AYTI01000019.1| 131341 130694 -1 - 648 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65928.peg.855 CDS gi|559755598|gb|AYTI01000019.1| 132356 131403 -2 - 954 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.65928.peg.856 CDS gi|559755598|gb|AYTI01000019.1| 133562 132378 -2 - 1185 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.65928.peg.857 CDS gi|559755598|gb|AYTI01000019.1| 135404 133665 -2 - 1740 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.65928.peg.858 CDS gi|559755598|gb|AYTI01000019.1| 136430 135471 -2 - 960 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.65928.peg.859 CDS gi|559755598|gb|AYTI01000019.1| 137248 136427 -1 - 822 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.65928.peg.860 CDS gi|559755598|gb|AYTI01000019.1| 137438 137277 -2 - 162 hypothetical protein - none -
fig|6666666.65928.peg.861 CDS gi|559755598|gb|AYTI01000019.1| 138428 137445 -2 - 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65928.peg.862 CDS gi|559755598|gb|AYTI01000019.1| 139690 138473 -1 - 1218 TPR-repeat-containing protein - none -
fig|6666666.65928.peg.863 CDS gi|559755601|gb|AYTI01000016.1| 124 2541 1 + 2418 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65928.peg.864 CDS gi|559755601|gb|AYTI01000016.1| 2724 2593 -3 - 132 hypothetical protein - none -
fig|6666666.65928.peg.865 CDS gi|559755601|gb|AYTI01000016.1| 2771 3208 2 + 438 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65928.peg.866 CDS gi|559755601|gb|AYTI01000016.1| 3201 4193 3 + 993 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.65928.peg.867 CDS gi|559755601|gb|AYTI01000016.1| 4288 5640 1 + 1353 putative DNA-damage-inducible protein F - none -
fig|6666666.65928.peg.868 CDS gi|559755601|gb|AYTI01000016.1| 5711 6586 2 + 876 putative SimX4 homolog - none -
fig|6666666.65928.peg.869 CDS gi|559755601|gb|AYTI01000016.1| 6583 7254 1 + 672 4@1-phosphopantetheinyl transferase entD (EC 2.7.8.-) - none -
fig|6666666.65928.peg.870 CDS gi|559755601|gb|AYTI01000016.1| 8190 7279 -3 - 912 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65928.peg.871 CDS gi|559755601|gb|AYTI01000016.1| 8203 9201 1 + 999 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65928.peg.872 CDS gi|559755601|gb|AYTI01000016.1| 9219 10184 3 + 966 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65928.peg.873 CDS gi|559755601|gb|AYTI01000016.1| 10383 10652 3 + 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.65928.peg.874 CDS gi|559755601|gb|AYTI01000016.1| 10792 13095 1 + 2304 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65928.peg.875 CDS gi|559755601|gb|AYTI01000016.1| 13346 14095 2 + 750 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65928.peg.876 CDS gi|559755601|gb|AYTI01000016.1| 14095 14853 1 + 759 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65928.peg.877 CDS gi|559755601|gb|AYTI01000016.1| 14987 15892 2 + 906 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65928.peg.878 CDS gi|559755601|gb|AYTI01000016.1| 15895 17946 1 + 2052 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.65928.peg.879 CDS gi|559755601|gb|AYTI01000016.1| 18031 18681 1 + 651 FIG00996591: hypothetical protein - none -
fig|6666666.65928.peg.880 CDS gi|559755601|gb|AYTI01000016.1| 18898 21897 1 + 3000 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65928.peg.881 CDS gi|559755601|gb|AYTI01000016.1| 21955 22113 1 + 159 hypothetical protein - none -
fig|6666666.65928.peg.882 CDS gi|559755601|gb|AYTI01000016.1| 22170 23216 3 + 1047 Integral membrane protein TerC - none -
fig|6666666.65928.peg.883 CDS gi|559755601|gb|AYTI01000016.1| 23633 23340 -2 - 294 FIG00544062: hypothetical protein - none -
fig|6666666.65928.peg.884 CDS gi|559755601|gb|AYTI01000016.1| 23745 24338 3 + 594 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.885 CDS gi|559755601|gb|AYTI01000016.1| 24328 24843 1 + 516 Similar to C-terminal domain of competence/damage-inducible protein CinA - none -
fig|6666666.65928.peg.886 CDS gi|559755601|gb|AYTI01000016.1| 24959 25291 2 + 333 putative transcription regulator - none -
fig|6666666.65928.peg.887 CDS gi|559755601|gb|AYTI01000016.1| 25413 26249 3 + 837 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65928.peg.888 CDS gi|559755601|gb|AYTI01000016.1| 26944 26330 -1 - 615 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65928.peg.889 CDS gi|559755601|gb|AYTI01000016.1| 27633 26941 -3 - 693 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65928.peg.890 CDS gi|559755601|gb|AYTI01000016.1| 28237 27638 -1 - 600 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65928.peg.891 CDS gi|559755601|gb|AYTI01000016.1| 28783 29892 1 + 1110 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65928.peg.892 CDS gi|559755601|gb|AYTI01000016.1| 29885 30490 2 + 606 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65928.peg.893 CDS gi|559755601|gb|AYTI01000016.1| 30487 32133 1 + 1647 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.65928.peg.894 CDS gi|559755601|gb|AYTI01000016.1| 32202 32756 3 + 555 FIG00544570: hypothetical protein - none -
fig|6666666.65928.peg.895 CDS gi|559755601|gb|AYTI01000016.1| 34022 32886 -2 - 1137 hypothetical protein - none -
fig|6666666.65928.peg.896 CDS gi|559755601|gb|AYTI01000016.1| 35316 34033 -3 - 1284 ATPase involved in DNA repair - none -
fig|6666666.65928.peg.897 CDS gi|559755601|gb|AYTI01000016.1| 35658 36374 3 + 717 No significant database matches - none -
fig|6666666.65928.peg.898 CDS gi|559755601|gb|AYTI01000016.1| 36365 37336 2 + 972 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.65928.peg.899 CDS gi|559755601|gb|AYTI01000016.1| 37339 38226 1 + 888 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.900 CDS gi|559755601|gb|AYTI01000016.1| 38813 38289 -2 - 525 FIG00543926: hypothetical protein - none -
fig|6666666.65928.peg.901 CDS gi|559755601|gb|AYTI01000016.1| 39637 38909 -1 - 729 FIG00546075: hypothetical protein - none -
fig|6666666.65928.peg.902 CDS gi|559755601|gb|AYTI01000016.1| 39918 41540 3 + 1623 GTP-binding protein HflX Hfl operon
fig|6666666.65928.peg.903 CDS gi|559755601|gb|AYTI01000016.1| 41735 42907 2 + 1173 xanthine/uracil permeases - none -
fig|6666666.65928.peg.904 CDS gi|559755601|gb|AYTI01000016.1| 43251 43520 3 + 270 hypothetical protein - none -
fig|6666666.65928.peg.905 CDS gi|559755601|gb|AYTI01000016.1| 44210 43548 -2 - 663 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.65928.peg.906 CDS gi|559755601|gb|AYTI01000016.1| 45329 44214 -2 - 1116 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.65928.peg.907 CDS gi|559755601|gb|AYTI01000016.1| 45805 45539 -1 - 267 Phosphocarrier protein of PTS system - none -
fig|6666666.65928.peg.908 CDS gi|559755601|gb|AYTI01000016.1| 48123 46084 -3 - 2040 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.65928.peg.909 CDS gi|559755601|gb|AYTI01000016.1| 49253 48273 -2 - 981 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65928.peg.910 CDS gi|559755601|gb|AYTI01000016.1| 50053 49250 -1 - 804 Putative sugar related operon transcriptional regulator (PTS system) - none -
fig|6666666.65928.peg.911 CDS gi|559755601|gb|AYTI01000016.1| 50264 51967 2 + 1704 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.65928.peg.912 CDS gi|559755601|gb|AYTI01000016.1| 52823 52047 -2 - 777 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65928.peg.913 CDS gi|559755601|gb|AYTI01000016.1| 53819 53112 -2 - 708 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65928.peg.914 CDS gi|559755601|gb|AYTI01000016.1| 54121 54504 1 + 384 hypothetical protein - none -
fig|6666666.65928.peg.915 CDS gi|559755601|gb|AYTI01000016.1| 54839 55069 2 + 231 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.65928.peg.916 CDS gi|559755601|gb|AYTI01000016.1| 58854 55066 -3 - 3789 ATP-dependent helicase HrpA - none -
fig|6666666.65928.peg.917 CDS gi|559755601|gb|AYTI01000016.1| 59316 60344 3 + 1029 FIG00544563: hypothetical protein - none -
fig|6666666.65928.peg.918 CDS gi|559755601|gb|AYTI01000016.1| 61363 60422 -1 - 942 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65928.peg.919 CDS gi|559755601|gb|AYTI01000016.1| 61675 61541 -1 - 135 hypothetical protein - none -
fig|6666666.65928.peg.920 CDS gi|559755601|gb|AYTI01000016.1| 61674 62270 3 + 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.65928.peg.921 CDS gi|559755601|gb|AYTI01000016.1| 62414 62938 2 + 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.65928.peg.922 CDS gi|559755601|gb|AYTI01000016.1| 65614 63074 -1 - 2541 putative helicase - none -
fig|6666666.65928.peg.923 CDS gi|559755601|gb|AYTI01000016.1| 66783 65770 -3 - 1014 FIG00994994: hypothetical protein - none -
fig|6666666.65928.peg.924 CDS gi|559755601|gb|AYTI01000016.1| 66897 67040 3 + 144 hypothetical protein - none -
fig|6666666.65928.peg.925 CDS gi|559755601|gb|AYTI01000016.1| 67174 68241 1 + 1068 FIG00544535: hypothetical protein - none -
fig|6666666.65928.peg.926 CDS gi|559755601|gb|AYTI01000016.1| 69266 68283 -2 - 984 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.65928.peg.927 CDS gi|559755601|gb|AYTI01000016.1| 69958 69278 -1 - 681 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.928 CDS gi|559755601|gb|AYTI01000016.1| 71217 70228 -3 - 990 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65928.peg.929 CDS gi|559755601|gb|AYTI01000016.1| 71691 71356 -3 - 336 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65928.peg.930 CDS gi|559755601|gb|AYTI01000016.1| 71699 71812 2 + 114 hypothetical protein - none -
fig|6666666.65928.peg.931 CDS gi|559755601|gb|AYTI01000016.1| 73322 71796 -2 - 1527 probable transferase - none -
fig|6666666.65928.peg.932 CDS gi|559755601|gb|AYTI01000016.1| 73997 73491 -2 - 507 FIG00545207: hypothetical protein - none -
fig|6666666.65928.peg.933 CDS gi|559755601|gb|AYTI01000016.1| 74057 74296 2 + 240 FIG00998432: hypothetical protein - none -
fig|6666666.65928.peg.934 CDS gi|559755601|gb|AYTI01000016.1| 74293 75999 1 + 1707 DNA or RNA helicases of superfamily II - none -
fig|6666666.65928.peg.935 CDS gi|559755601|gb|AYTI01000016.1| 76141 76665 1 + 525 hypothetical membrane protein - none -
fig|6666666.65928.peg.936 CDS gi|559755601|gb|AYTI01000016.1| 78333 76732 -3 - 1602 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65928.peg.937 CDS gi|559755601|gb|AYTI01000016.1| 79452 78700 -3 - 753 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65928.peg.938 CDS gi|559755601|gb|AYTI01000016.1| 79667 80599 2 + 933 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.65928.peg.939 CDS gi|559755601|gb|AYTI01000016.1| 80793 81086 3 + 294 FIG01121218: hypothetical protein - none -
fig|6666666.65928.peg.940 CDS gi|559755601|gb|AYTI01000016.1| 81738 81241 -3 - 498 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65928.peg.941 CDS gi|559755601|gb|AYTI01000016.1| 81971 82432 2 + 462 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65928.peg.942 CDS gi|559755601|gb|AYTI01000016.1| 82539 83351 3 + 813 FIG01122115: hypothetical protein - none -
fig|6666666.65928.peg.943 CDS gi|559755601|gb|AYTI01000016.1| 83378 84082 2 + 705 PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH PROTEIN - none -
fig|6666666.65928.peg.944 CDS gi|559755601|gb|AYTI01000016.1| 84083 85402 2 + 1320 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) - none -
fig|6666666.65928.peg.945 CDS gi|559755601|gb|AYTI01000016.1| 85610 87544 2 + 1935 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65928.peg.946 CDS gi|559755601|gb|AYTI01000016.1| 88774 87569 -1 - 1206 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.65928.peg.947 CDS gi|559755601|gb|AYTI01000016.1| 89393 88785 -2 - 609 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65928.peg.948 CDS gi|559755601|gb|AYTI01000016.1| 89686 90390 1 + 705 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.949 CDS gi|559755601|gb|AYTI01000016.1| 90878 90468 -2 - 411 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65928.peg.950 CDS gi|559755601|gb|AYTI01000016.1| 92382 91102 -3 - 1281 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65928.peg.951 CDS gi|559755601|gb|AYTI01000016.1| 93218 92454 -2 - 765 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.65928.peg.952 CDS gi|559755602|gb|AYTI01000015.1| 948 2561 3 + 1614 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65928.peg.953 CDS gi|559755602|gb|AYTI01000015.1| 3287 2622 -2 - 666 hypothetical membrane protein - none -
fig|6666666.65928.peg.954 CDS gi|559755602|gb|AYTI01000015.1| 3705 3292 -3 - 414 FIG00998994: hypothetical protein - none -
fig|6666666.65928.peg.955 CDS gi|559755602|gb|AYTI01000015.1| 4908 3730 -3 - 1179 FIG00544639: hypothetical protein - none -
fig|6666666.65928.peg.956 CDS gi|559755602|gb|AYTI01000015.1| 5786 5070 -2 - 717 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.65928.peg.957 CDS gi|559755602|gb|AYTI01000015.1| 6495 5806 -3 - 690 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.65928.peg.958 CDS gi|559755602|gb|AYTI01000015.1| 7070 6477 -2 - 594 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.65928.peg.959 CDS gi|559755602|gb|AYTI01000015.1| 8377 7325 -1 - 1053 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65928.peg.960 CDS gi|559755602|gb|AYTI01000015.1| 8385 8993 3 + 609 hypothetical protein - none -
fig|6666666.65928.peg.961 CDS gi|559755602|gb|AYTI01000015.1| 9063 9761 3 + 699 hypothetical protein - none -
fig|6666666.65928.peg.962 CDS gi|559755602|gb|AYTI01000015.1| 9846 10259 3 + 414 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65928.peg.963 CDS gi|559755602|gb|AYTI01000015.1| 10406 10266 -2 - 141 hypothetical protein - none -
fig|6666666.65928.peg.964 CDS gi|559755602|gb|AYTI01000015.1| 11154 10552 -3 - 603 molybdopterin biosynthesis enzyme - none -
fig|6666666.65928.peg.965 CDS gi|559755602|gb|AYTI01000015.1| 12718 11249 -1 - 1470 HtrA protease/chaperone protein Periplasmic Stress Response
fig|6666666.65928.peg.966 CDS gi|559755602|gb|AYTI01000015.1| 14461 12917 -1 - 1545 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.65928.peg.967 CDS gi|559755602|gb|AYTI01000015.1| 15150 14458 -3 - 693 Mycobacterial persistence regulator MprA (Two component response transcriptional regulatory protein) - none -
fig|6666666.65928.peg.968 CDS gi|559755602|gb|AYTI01000015.1| 15467 15294 -2 - 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65928.peg.969 CDS gi|559755602|gb|AYTI01000015.1| 15752 15486 -2 - 267 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.65928.peg.970 CDS gi|559755602|gb|AYTI01000015.1| 16334 16570 2 + 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65928.peg.971 CDS gi|559755602|gb|AYTI01000015.1| 16574 16738 2 + 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65928.peg.972 CDS gi|559755602|gb|AYTI01000015.1| 16742 17047 2 + 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.65928.peg.973 CDS gi|559755602|gb|AYTI01000015.1| 17062 17310 1 + 249 SSU ribosomal protein S18p - none -
fig|6666666.65928.peg.974 CDS gi|559755602|gb|AYTI01000015.1| 17519 18433 2 + 915 No significant database matches - none -
fig|6666666.65928.peg.975 CDS gi|559755602|gb|AYTI01000015.1| 18608 19291 2 + 684 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.976 CDS gi|559755602|gb|AYTI01000015.1| 20251 19349 -1 - 903 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.65928.peg.977 CDS gi|559755602|gb|AYTI01000015.1| 21214 20276 -1 - 939 glutamate permease - none -
fig|6666666.65928.peg.978 CDS gi|559755602|gb|AYTI01000015.1| 21897 21211 -3 - 687 ABC-type amino acid transport system, permease component - none -
fig|6666666.65928.peg.979 CDS gi|559755602|gb|AYTI01000015.1| 22817 21933 -2 - 885 glutamate-binding protein GluB - none -
fig|6666666.65928.peg.980 CDS gi|559755602|gb|AYTI01000015.1| 23592 22864 -3 - 729 putative glutamate uptake system ATP-binding protein - none -
fig|6666666.65928.peg.981 CDS gi|559755602|gb|AYTI01000015.1| 23834 23715 -2 - 120 hypothetical protein - none -
fig|6666666.65928.peg.982 CDS gi|559755602|gb|AYTI01000015.1| 25465 23888 -1 - 1578 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65928.peg.983 CDS gi|559755602|gb|AYTI01000015.1| 26024 25458 -2 - 567 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) De Novo Purine Biosynthesis
fig|6666666.65928.peg.984 CDS gi|559755602|gb|AYTI01000015.1| 27651 26134 -3 - 1518 FIG00945484: hypothetical protein - none -
fig|6666666.65928.peg.985 CDS gi|559755602|gb|AYTI01000015.1| 28122 28835 3 + 714 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65928.peg.986 CDS gi|559755602|gb|AYTI01000015.1| 31517 28950 -2 - 2568 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65928.peg.987 CDS gi|559755602|gb|AYTI01000015.1| 31660 31529 -1 - 132 hypothetical protein - none -
fig|6666666.65928.peg.988 CDS gi|559755602|gb|AYTI01000015.1| 31659 31961 3 + 303 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65928.peg.989 CDS gi|559755602|gb|AYTI01000015.1| 33487 32000 -1 - 1488 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65928.peg.990 CDS gi|559755602|gb|AYTI01000015.1| 33666 35309 3 + 1644 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.991 CDS gi|559755602|gb|AYTI01000015.1| 35786 35373 -2 - 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65928.peg.992 CDS gi|559755602|gb|AYTI01000015.1| 36650 35829 -2 - 822 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65928.peg.993 CDS gi|559755602|gb|AYTI01000015.1| 36694 37350 1 + 657 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.65928.peg.994 CDS gi|559755602|gb|AYTI01000015.1| 41152 37355 -1 - 3798 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65928.peg.995 CDS gi|559755602|gb|AYTI01000015.1| 42240 41164 -3 - 1077 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.65928.peg.996 CDS gi|559755602|gb|AYTI01000015.1| 42247 42375 1 + 129 hypothetical protein - none -
fig|6666666.65928.peg.997 CDS gi|559755602|gb|AYTI01000015.1| 42569 43327 2 + 759 inositol monophosphatase family protein - none -
fig|6666666.65928.peg.998 CDS gi|559755602|gb|AYTI01000015.1| 43443 43324 -3 - 120 hypothetical protein - none -
fig|6666666.65928.peg.999 CDS gi|559755602|gb|AYTI01000015.1| 43442 44239 2 + 798 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.65928.peg.1000 CDS gi|559755602|gb|AYTI01000015.1| 44239 44766 1 + 528 Dihydrofolate reductase (EC 1.5.1.3) Folate Biosynthesis
fig|6666666.65928.peg.1001 CDS gi|559755602|gb|AYTI01000015.1| 44785 45036 1 + 252 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65928.peg.1002 CDS gi|559755602|gb|AYTI01000015.1| 45788 45033 -2 - 756 Precorrin-6A synthase (EC 2.1.1.152) - none -
fig|6666666.65928.peg.1003 CDS gi|559755602|gb|AYTI01000015.1| 46073 45795 -2 - 279 FIG00544401: hypothetical protein - none -
fig|6666666.65928.peg.1004 CDS gi|559755602|gb|AYTI01000015.1| 46791 46991 3 + 201 hypothetical protein - none -
fig|6666666.65928.peg.1005 CDS gi|559755602|gb|AYTI01000015.1| 47958 48086 3 + 129 hypothetical protein - none -
fig|6666666.65928.peg.1006 CDS gi|559755602|gb|AYTI01000015.1| 49758 48307 -3 - 1452 ABC transporter, ATP-binding protein - none -
fig|6666666.65928.peg.1007 CDS gi|559755602|gb|AYTI01000015.1| 50551 49778 -1 - 774 hypothetical protein - none -
fig|6666666.65928.peg.1008 CDS gi|559755602|gb|AYTI01000015.1| 51483 50527 -3 - 957 ABC transporter permease protein - none -
fig|6666666.65928.peg.1009 CDS gi|559755602|gb|AYTI01000015.1| 53019 51487 -3 - 1533 ABC transporter solute-bing protein - none -
fig|6666666.65928.peg.1010 CDS gi|559755602|gb|AYTI01000015.1| 53209 54177 1 + 969 oxygenase - none -
fig|6666666.65928.peg.1011 CDS gi|559755602|gb|AYTI01000015.1| 54174 55160 3 + 987 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65928.peg.1012 CDS gi|559755602|gb|AYTI01000015.1| 55154 56512 2 + 1359 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.1013 CDS gi|559755602|gb|AYTI01000015.1| 56509 57579 1 + 1071 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65928.peg.1014 CDS gi|559755602|gb|AYTI01000015.1| 57570 58976 3 + 1407 putative transporter - none -
fig|6666666.65928.peg.1015 CDS gi|559755602|gb|AYTI01000015.1| 59355 59936 3 + 582 hypothetical protein - none -
fig|6666666.65928.peg.1016 CDS gi|559755602|gb|AYTI01000015.1| 60024 61298 3 + 1275 Na+/H+ antiporter - none -
fig|6666666.65928.peg.1017 CDS gi|559755602|gb|AYTI01000015.1| 61432 61295 -1 - 138 hypothetical protein - none -
fig|6666666.65928.peg.1018 CDS gi|559755602|gb|AYTI01000015.1| 61540 62448 1 + 909 Putative secreted protein - none -
fig|6666666.65928.peg.1019 CDS gi|559755602|gb|AYTI01000015.1| 63252 62494 -3 - 759 FIG00544899: hypothetical protein - none -
fig|6666666.65928.peg.1020 CDS gi|559755602|gb|AYTI01000015.1| 65103 63460 -3 - 1644 putative transport protein - none -
fig|6666666.65928.peg.1021 CDS gi|559755602|gb|AYTI01000015.1| 65447 65106 -2 - 342 FIG00544151: hypothetical protein - none -
fig|6666666.65928.peg.1022 CDS gi|559755602|gb|AYTI01000015.1| 66686 65853 -2 - 834 Enoyl-CoA hydratase (EC 4.2.1.17) - none -
fig|6666666.65928.peg.1023 CDS gi|559755602|gb|AYTI01000015.1| 67638 66778 -3 - 861 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65928.peg.1024 CDS gi|559755602|gb|AYTI01000015.1| 67782 67669 -3 - 114 hypothetical protein - none -
fig|6666666.65928.peg.1025 CDS gi|559755602|gb|AYTI01000015.1| 68192 68812 2 + 621 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65928.peg.1026 CDS gi|559755602|gb|AYTI01000015.1| 68994 70499 3 + 1506 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65928.peg.1027 CDS gi|559755602|gb|AYTI01000015.1| 70932 70573 -3 - 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65928.peg.1028 CDS gi|559755602|gb|AYTI01000015.1| 72411 71116 -3 - 1296 Citrate synthase (si) (EC 2.3.3.1) TCA Cycle
fig|6666666.65928.peg.1029 CDS gi|559755602|gb|AYTI01000015.1| 72794 72672 -2 - 123 hypothetical protein - none -
fig|6666666.65928.peg.1030 CDS gi|559755602|gb|AYTI01000015.1| 73078 74208 1 + 1131 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65928.peg.1031 CDS gi|559755602|gb|AYTI01000015.1| 74411 75478 2 + 1068 FIG00545091: hypothetical protein - none -
fig|6666666.65928.peg.1032 CDS gi|559755602|gb|AYTI01000015.1| 75546 76448 3 + 903 FIG00544583: hypothetical protein - none -
fig|6666666.65928.peg.1033 CDS gi|559755602|gb|AYTI01000015.1| 77321 76449 -2 - 873 putative rRNA methylase - none -
fig|6666666.65928.peg.1034 CDS gi|559755602|gb|AYTI01000015.1| 78962 77484 -2 - 1479 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65928.peg.1035 CDS gi|559755602|gb|AYTI01000015.1| 79216 79091 -1 - 126 hypothetical protein - none -
fig|6666666.65928.peg.1036 CDS gi|559755602|gb|AYTI01000015.1| 79865 79176 -2 - 690 FIG01121526: hypothetical protein - none -
fig|6666666.65928.peg.1037 CDS gi|559755602|gb|AYTI01000015.1| 79967 80911 2 + 945 glutamine cyclotransferase - none -
fig|6666666.65928.peg.1038 CDS gi|559755602|gb|AYTI01000015.1| 80940 81467 3 + 528 FIG00545981: hypothetical protein - none -
fig|6666666.65928.peg.1039 CDS gi|559755602|gb|AYTI01000015.1| 81933 81541 -3 - 393 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65928.peg.1040 CDS gi|559755602|gb|AYTI01000015.1| 82385 82266 -2 - 120 hypothetical protein - none -
fig|6666666.65928.peg.1041 CDS gi|559755602|gb|AYTI01000015.1| 82754 83134 2 + 381 FIG00996461: hypothetical protein - none -
fig|6666666.65928.peg.1042 CDS gi|559755602|gb|AYTI01000015.1| 83688 83509 -3 - 180 FIG00543815: hypothetical protein - none -
fig|6666666.65928.peg.1043 CDS gi|559755602|gb|AYTI01000015.1| 83765 86071 2 + 2307 probable DNA-binding protein - none -
fig|6666666.65928.peg.1044 CDS gi|559755602|gb|AYTI01000015.1| 86187 87836 3 + 1650 DNA repair helicase - none -
fig|6666666.65928.peg.1045 CDS gi|559755602|gb|AYTI01000015.1| 87903 88544 3 + 642 FIG00546748: hypothetical protein - none -
fig|6666666.65928.peg.1046 CDS gi|559755602|gb|AYTI01000015.1| 88544 88957 2 + 414 Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase - none -
fig|6666666.65928.peg.1047 CDS gi|559755602|gb|AYTI01000015.1| 89038 89712 1 + 675 PLP-dependent aminotransferase - none -
fig|6666666.65928.peg.1048 CDS gi|559755604|gb|AYTI01000013.1| 143 30 -2 - 114 hypothetical protein - none -
fig|6666666.65928.peg.1049 CDS gi|559755604|gb|AYTI01000013.1| 1747 143 -1 - 1605 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.65928.peg.1050 CDS gi|559755604|gb|AYTI01000013.1| 1986 2486 3 + 501 Putative oxidoreductase - none -
fig|6666666.65928.peg.1051 CDS gi|559755604|gb|AYTI01000013.1| 2604 5219 3 + 2616 Fe-S oxidoreductase - none -
fig|6666666.65928.peg.1052 CDS gi|559755604|gb|AYTI01000013.1| 5344 6006 1 + 663 hypothetical protein - none -
fig|6666666.65928.peg.1053 CDS gi|559755604|gb|AYTI01000013.1| 6314 6003 -2 - 312 putative mercury resistance operon regulator MerR - none -
fig|6666666.65928.peg.1054 CDS gi|559755604|gb|AYTI01000013.1| 7098 6328 -3 - 771 ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.65928.peg.1055 CDS gi|559755604|gb|AYTI01000013.1| 8168 7101 -2 - 1068 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.65928.peg.1056 CDS gi|559755604|gb|AYTI01000013.1| 9196 8186 -1 - 1011 periplasmic binding protein - none -
fig|6666666.65928.peg.1057 CDS gi|559755604|gb|AYTI01000013.1| 9195 9353 3 + 159 hypothetical protein - none -
fig|6666666.65928.peg.1058 CDS gi|559755604|gb|AYTI01000013.1| 9573 9451 -3 - 123 hypothetical protein - none -
fig|6666666.65928.peg.1059 CDS gi|559755604|gb|AYTI01000013.1| 10749 9871 -3 - 879 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65928.peg.1060 CDS gi|559755604|gb|AYTI01000013.1| 11364 10750 -3 - 615 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65928.peg.1061 CDS gi|559755604|gb|AYTI01000013.1| 12110 11391 -2 - 720 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65928.peg.1062 CDS gi|559755604|gb|AYTI01000013.1| 12567 12091 -3 - 477 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65928.peg.1063 CDS gi|559755604|gb|AYTI01000013.1| 14408 12699 -2 - 1710 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65928.peg.1064 CDS gi|559755604|gb|AYTI01000013.1| 14786 14475 -2 - 312 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65928.peg.1065 CDS gi|559755604|gb|AYTI01000013.1| 15118 14816 -1 - 303 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.65928.peg.1066 CDS gi|559755604|gb|AYTI01000013.1| 16434 15280 -3 - 1155 hypothetical protein - none -
fig|6666666.65928.peg.1067 CDS gi|559755604|gb|AYTI01000013.1| 17367 18524 3 + 1158 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65928.peg.1068 CDS gi|559755604|gb|AYTI01000013.1| 18553 20031 1 + 1479 FIG00997783: hypothetical protein - none -
fig|6666666.65928.peg.1069 CDS gi|559755604|gb|AYTI01000013.1| 20090 23308 2 + 3219 Putative membrane protein found fused to lysyl-tRNA synthetase like protein / Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein tRNA aminoacylation, Lys;
tRNA aminoacylation, Lys
fig|6666666.65928.peg.1070 CDS gi|559755604|gb|AYTI01000013.1| 23945 23271 -2 - 675 hypothetical protein - none -
fig|6666666.65928.peg.1071 CDS gi|559755604|gb|AYTI01000013.1| 24105 23905 -3 - 201 Putative integral membrane protein - none -
fig|6666666.65928.peg.1072 CDS gi|559755604|gb|AYTI01000013.1| 24569 24066 -2 - 504 Putative integral membrane protein - none -
fig|6666666.65928.peg.1073 CDS gi|559755604|gb|AYTI01000013.1| 24763 24569 -1 - 195 hypothetical protein - none -
fig|6666666.65928.peg.1074 CDS gi|559755604|gb|AYTI01000013.1| 26101 24776 -1 - 1326 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65928.peg.1075 CDS gi|559755604|gb|AYTI01000013.1| 26672 26106 -2 - 567 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) - none -
fig|6666666.65928.peg.1076 CDS gi|559755604|gb|AYTI01000013.1| 28592 27201 -2 - 1392 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65928.peg.1077 CDS gi|559755604|gb|AYTI01000013.1| 29328 28741 -3 - 588 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.1078 CDS gi|559755604|gb|AYTI01000013.1| 31060 29333 -1 - 1728 FIG00548655: hypothetical protein - none -
fig|6666666.65928.peg.1079 CDS gi|559755604|gb|AYTI01000013.1| 32753 31053 -2 - 1701 ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1080 CDS gi|559755604|gb|AYTI01000013.1| 34215 32743 -3 - 1473 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.65928.peg.1081 CDS gi|559755604|gb|AYTI01000013.1| 35491 34901 -1 - 591 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.65928.peg.1082 CDS gi|559755604|gb|AYTI01000013.1| 37499 35838 -2 - 1662 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65928.peg.1083 CDS gi|559755604|gb|AYTI01000013.1| 38819 37692 -2 - 1128 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.65928.peg.1084 CDS gi|559755604|gb|AYTI01000013.1| 38854 39042 1 + 189 Putative secreted protein - none -
fig|6666666.65928.peg.1085 CDS gi|559755604|gb|AYTI01000013.1| 39108 42329 3 + 3222 Conserved putative integral membrane protein - none -
fig|6666666.65928.peg.1086 CDS gi|559755604|gb|AYTI01000013.1| 43457 42387 -2 - 1071 Lysophospholipid acyltransferase - none -
fig|6666666.65928.peg.1087 CDS gi|559755604|gb|AYTI01000013.1| 43495 44685 1 + 1191 FIG00547617: hypothetical protein - none -
fig|6666666.65928.peg.1088 CDS gi|559755604|gb|AYTI01000013.1| 44687 46156 2 + 1470 FIG00547077: hypothetical protein - none -
fig|6666666.65928.peg.1089 CDS gi|559755604|gb|AYTI01000013.1| 47219 47986 2 + 768 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65928.peg.1090 CDS gi|559755604|gb|AYTI01000013.1| 49886 48021 -2 - 1866 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65928.peg.1091 CDS gi|559755604|gb|AYTI01000013.1| 50408 51181 2 + 774 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) - none -
fig|6666666.65928.peg.1092 CDS gi|559755604|gb|AYTI01000013.1| 51182 51841 2 + 660 FIG01001556: hypothetical protein - none -
fig|6666666.65928.peg.1093 CDS gi|559755604|gb|AYTI01000013.1| 51853 54471 1 + 2619 Transmembrane transport protein MmpL5 - none -
fig|6666666.65928.peg.1094 CDS gi|559755604|gb|AYTI01000013.1| 54518 55546 2 + 1029 hypothetical protein - none -
fig|6666666.65928.peg.1095 CDS gi|559755604|gb|AYTI01000013.1| 55543 55890 1 + 348 FIG00544939: hypothetical protein - none -
fig|6666666.65928.peg.1096 CDS gi|559755604|gb|AYTI01000013.1| 56056 56646 1 + 591 hypothetical protein - none -
fig|6666666.65928.peg.1097 CDS gi|559755604|gb|AYTI01000013.1| 56769 57410 3 + 642 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65928.peg.1098 CDS gi|559755604|gb|AYTI01000013.1| 59028 57475 -3 - 1554 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65928.peg.1099 CDS gi|559755604|gb|AYTI01000013.1| 63887 59052 -2 - 4836 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65928.peg.1100 CDS gi|559755604|gb|AYTI01000013.1| 65945 64098 -2 - 1848 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.1101 CDS gi|559755604|gb|AYTI01000013.1| 67154 66228 -2 - 927 hypothetical protein Rv3802c - none -
fig|6666666.65928.peg.1102 CDS gi|559755604|gb|AYTI01000013.1| 67687 67160 -1 - 528 FIG00544389: hypothetical protein - none -
fig|6666666.65928.peg.1103 CDS gi|559755604|gb|AYTI01000013.1| 69621 67687 -3 - 1935 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65928.peg.1104 CDS gi|559755604|gb|AYTI01000013.1| 71309 69987 -2 - 1323 putative membrane protein - none -
fig|6666666.65928.peg.1105 CDS gi|559755604|gb|AYTI01000013.1| 72473 71448 -2 - 1026 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65928.peg.1106 CDS gi|559755604|gb|AYTI01000013.1| 74650 72719 -1 - 1932 hypothetical protein Rv3805c - none -
fig|6666666.65928.peg.1107 CDS gi|559755604|gb|AYTI01000013.1| 75793 74813 -1 - 981 putative membrane protein - none -
fig|6666666.65928.peg.1108 CDS gi|559755604|gb|AYTI01000013.1| 76300 75794 -1 - 507 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65928.peg.1109 CDS gi|559755604|gb|AYTI01000013.1| 78284 76293 -2 - 1992 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65928.peg.1110 CDS gi|559755604|gb|AYTI01000013.1| 78551 79906 2 + 1356 FIG00545828: hypothetical protein - none -
fig|6666666.65928.peg.1111 CDS gi|559755604|gb|AYTI01000013.1| 80409 79903 -3 - 507 Putative conserved integral membrane protein - none -
fig|6666666.65928.peg.1112 CDS gi|559755604|gb|AYTI01000013.1| 83692 80495 -1 - 3198 hypothetical protein - none -
fig|6666666.65928.peg.1113 CDS gi|559755604|gb|AYTI01000013.1| 85403 84306 -2 - 1098 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65928.peg.1114 CDS gi|559755604|gb|AYTI01000013.1| 86848 85478 -1 - 1371 Glycerol-3-phosphate transporter Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65928.peg.1115 CDS gi|559755604|gb|AYTI01000013.1| 88482 87286 -3 - 1197 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65928.peg.1116 CDS gi|559755604|gb|AYTI01000013.1| 89230 88586 -1 - 645 putative iron ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1117 CDS gi|559755604|gb|AYTI01000013.1| 90350 89364 -2 - 987 ABC-type transporter, permease component - none -
fig|6666666.65928.peg.1118 CDS gi|559755604|gb|AYTI01000013.1| 91423 90410 -1 - 1014 hypothetical protein - none -
fig|6666666.65928.peg.1119 CDS gi|559755604|gb|AYTI01000013.1| 91899 93920 3 + 2022 FIG00544841: hypothetical protein - none -
fig|6666666.65928.peg.1120 CDS gi|559755604|gb|AYTI01000013.1| 94850 93996 -2 - 855 Cof family hydrolase - none -
fig|6666666.65928.peg.1121 CDS gi|559755604|gb|AYTI01000013.1| 95827 94979 -1 - 849 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.1122 CDS gi|559755604|gb|AYTI01000013.1| 97129 95846 -1 - 1284 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65928.peg.1123 CDS gi|559755604|gb|AYTI01000013.1| 97197 97943 3 + 747 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.65928.peg.1124 CDS gi|559755604|gb|AYTI01000013.1| 97964 98977 2 + 1014 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65928.peg.1125 CDS gi|559755604|gb|AYTI01000013.1| 98977 99324 1 + 348 FIG00999549: hypothetical protein - none -
fig|6666666.65928.peg.1126 CDS gi|559755604|gb|AYTI01000013.1| 100090 99425 -1 - 666 putative phosphoglycerate mutase - none -
fig|6666666.65928.peg.1127 CDS gi|559755604|gb|AYTI01000013.1| 101017 100094 -1 - 924 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65928.peg.1128 CDS gi|559755604|gb|AYTI01000013.1| 101053 102201 1 + 1149 putative amidase - none -
fig|6666666.65928.peg.1129 CDS gi|559755604|gb|AYTI01000013.1| 102198 102812 3 + 615 Putative conserved integral membrane protein - none -
fig|6666666.65928.peg.1130 CDS gi|559755604|gb|AYTI01000013.1| 102809 102958 2 + 150 Putative conserved integral membrane protein - none -
fig|6666666.65928.peg.1131 CDS gi|559755604|gb|AYTI01000013.1| 103009 104289 1 + 1281 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65928.peg.1132 CDS gi|559755604|gb|AYTI01000013.1| 105501 104392 -3 - 1110 hypothetical protein - none -
fig|6666666.65928.peg.1133 CDS gi|559755604|gb|AYTI01000013.1| 107462 105513 -2 - 1950 hypothetical protein - none -
fig|6666666.65928.peg.1134 CDS gi|559755604|gb|AYTI01000013.1| 108851 107727 -2 - 1125 sodium/alanine symporter family protein - none -
fig|6666666.65928.peg.1135 CDS gi|559755604|gb|AYTI01000013.1| 109285 108815 -1 - 471 sodium/alanine symporter family protein - none -
fig|6666666.65928.peg.1136 CDS gi|559755604|gb|AYTI01000013.1| 110360 109449 -2 - 912 FIG00996178: hypothetical protein - none -
fig|6666666.65928.peg.1137 CDS gi|559755604|gb|AYTI01000013.1| 111143 110424 -2 - 720 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65928.peg.1138 CDS gi|559755604|gb|AYTI01000013.1| 112486 111272 -1 - 1215 Nucleoside permease NupC - none -
fig|6666666.65928.peg.1139 CDS gi|559755604|gb|AYTI01000013.1| 112968 112498 -3 - 471 Cytidine deaminase (EC 3.5.4.5) - none -
fig|6666666.65928.peg.1140 CDS gi|559755604|gb|AYTI01000013.1| 113165 114451 2 + 1287 Thymidine phosphorylase (EC 2.4.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65928.peg.1141 CDS gi|559755604|gb|AYTI01000013.1| 115547 114597 -2 - 951 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.65928.peg.1142 CDS gi|559755604|gb|AYTI01000013.1| 116496 115822 -3 - 675 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65928.peg.1143 CDS gi|559755604|gb|AYTI01000013.1| 116885 117487 2 + 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65928.peg.1144 CDS gi|559755604|gb|AYTI01000013.1| 117821 118405 2 + 585 FMN reductase, NADPH-dependent - none -
fig|6666666.65928.peg.1145 CDS gi|559755604|gb|AYTI01000013.1| 119339 118380 -2 - 960 transcriptional regulator, LysR family - none -
fig|6666666.65928.peg.1146 CDS gi|559755604|gb|AYTI01000013.1| 119397 120608 3 + 1212 putative transport protein - none -
fig|6666666.65928.peg.1147 CDS gi|559755604|gb|AYTI01000013.1| 120717 122540 3 + 1824 FIG00748724: hypothetical protein - none -
fig|6666666.65928.peg.1148 CDS gi|559755604|gb|AYTI01000013.1| 122581 122901 1 + 321 hypothetical protein - none -
fig|6666666.65928.peg.1149 CDS gi|559755604|gb|AYTI01000013.1| 124162 122882 -1 - 1281 putative membrane protein - none -
fig|6666666.65928.peg.1150 CDS gi|559755604|gb|AYTI01000013.1| 125599 124295 -1 - 1305 FIG00544355: hypothetical protein - none -
fig|6666666.65928.peg.1151 CDS gi|559755604|gb|AYTI01000013.1| 126005 126637 2 + 633 FIG071084: hypothetical protein - none -
fig|6666666.65928.peg.1152 CDS gi|559755604|gb|AYTI01000013.1| 127177 127497 1 + 321 FIG00545047: hypothetical protein - none -
fig|6666666.65928.peg.1153 CDS gi|559755604|gb|AYTI01000013.1| 128192 127554 -2 - 639 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.1154 CDS gi|559755604|gb|AYTI01000013.1| 129653 128328 -2 - 1326 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.1155 CDS gi|559755604|gb|AYTI01000013.1| 129652 130224 1 + 573 FIG00544353: hypothetical protein - none -
fig|6666666.65928.peg.1156 CDS gi|559755604|gb|AYTI01000013.1| 130454 130302 -2 - 153 FIG060545: short hypothetical protein - none -
fig|6666666.65928.peg.1157 CDS gi|559755604|gb|AYTI01000013.1| 131225 130455 -2 - 771 FIG054872: Sortase-like protein - none -
fig|6666666.65928.peg.1158 CDS gi|559755604|gb|AYTI01000013.1| 131519 132730 2 + 1212 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.65928.peg.1159 CDS gi|559755604|gb|AYTI01000013.1| 133353 132727 -3 - 627 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.1160 CDS gi|559755604|gb|AYTI01000013.1| 133533 134261 3 + 729 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.65928.peg.1161 CDS gi|559755604|gb|AYTI01000013.1| 134575 134318 -1 - 258 FIG00545001: hypothetical protein - none -
fig|6666666.65928.peg.1162 CDS gi|559755604|gb|AYTI01000013.1| 135826 134927 -1 - 900 Universal stress protein family - none -
fig|6666666.65928.peg.1163 CDS gi|559755604|gb|AYTI01000013.1| 136184 136041 -2 - 144 hypothetical protein - none -
fig|6666666.65928.peg.1164 CDS gi|559755604|gb|AYTI01000013.1| 136177 137160 1 + 984 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65928.peg.1165 CDS gi|559755605|gb|AYTI01000012.1| 1022 2548 2 + 1527 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65928.peg.1166 CDS gi|559755605|gb|AYTI01000012.1| 2760 4733 3 + 1974 oligopeptide transporter - none -
fig|6666666.65928.peg.1167 CDS gi|559755605|gb|AYTI01000012.1| 7897 4952 -1 - 2946 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65928.peg.1168 CDS gi|559755605|gb|AYTI01000012.1| 8343 8140 -3 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65928.peg.1169 CDS gi|559755605|gb|AYTI01000012.1| 8593 10950 1 + 2358 ATP-dependent helicase - none -
fig|6666666.65928.peg.1170 CDS gi|559755605|gb|AYTI01000012.1| 11331 10984 -3 - 348 Putative secreted protein - none -
fig|6666666.65928.peg.1171 CDS gi|559755605|gb|AYTI01000012.1| 11600 11328 -2 - 273 Putative secreted protein - none -
fig|6666666.65928.peg.1172 CDS gi|559755605|gb|AYTI01000012.1| 11804 11610 -2 - 195 hypothetical protein - none -
fig|6666666.65928.peg.1173 CDS gi|559755605|gb|AYTI01000012.1| 12065 11880 -2 - 186 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.65928.peg.1174 CDS gi|559755605|gb|AYTI01000012.1| 12943 12500 -1 - 444 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.65928.peg.1175 CDS gi|559755605|gb|AYTI01000012.1| 14379 13255 -3 - 1125 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.65928.peg.1176 CDS gi|559755605|gb|AYTI01000012.1| 15407 14376 -2 - 1032 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.65928.peg.1177 CDS gi|559755605|gb|AYTI01000012.1| 16870 17742 1 + 873 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65928.peg.1178 CDS gi|559755605|gb|AYTI01000012.1| 18451 17786 -1 - 666 probable oxidoreductase - none -
fig|6666666.65928.peg.1179 CDS gi|559755605|gb|AYTI01000012.1| 18568 19068 1 + 501 FIG00820727: hypothetical protein - none -
fig|6666666.65928.peg.1180 CDS gi|559755605|gb|AYTI01000012.1| 19159 20073 1 + 915 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.65928.peg.1181 CDS gi|559755605|gb|AYTI01000012.1| 21248 20070 -2 - 1179 putative serine protease - none -
fig|6666666.65928.peg.1182 CDS gi|559755605|gb|AYTI01000012.1| 22127 21348 -2 - 780 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65928.peg.1183 CDS gi|559755605|gb|AYTI01000012.1| 22729 22127 -1 - 603 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.65928.peg.1184 CDS gi|559755605|gb|AYTI01000012.1| 23538 22732 -3 - 807 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65928.peg.1185 CDS gi|559755605|gb|AYTI01000012.1| 23619 23834 3 + 216 hypothetical protein - none -
fig|6666666.65928.peg.1186 CDS gi|559755605|gb|AYTI01000012.1| 24136 24819 1 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65928.peg.1187 CDS gi|559755605|gb|AYTI01000012.1| 25635 25000 -3 - 636 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65928.peg.1188 CDS gi|559755605|gb|AYTI01000012.1| 26302 25844 -1 - 459 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65928.peg.1189 CDS gi|559755605|gb|AYTI01000012.1| 26457 26302 -3 - 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65928.peg.1190 CDS gi|559755605|gb|AYTI01000012.1| 26968 26621 -1 - 348 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65928.peg.1191 CDS gi|559755605|gb|AYTI01000012.1| 27163 29535 1 + 2373 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65928.peg.1192 CDS gi|559755605|gb|AYTI01000012.1| 30016 29555 -1 - 462 Transamidase GatB domain protein - none -
fig|6666666.65928.peg.1193 CDS gi|559755605|gb|AYTI01000012.1| 30051 30956 3 + 906 putative secreted protein - none -
fig|6666666.65928.peg.1194 CDS gi|559755605|gb|AYTI01000012.1| 31499 32902 2 + 1404 Putative secreted protein - none -
fig|6666666.65928.peg.1195 CDS gi|559755605|gb|AYTI01000012.1| 34332 32899 -3 - 1434 FIG00544507: hypothetical protein - none -
fig|6666666.65928.peg.1196 CDS gi|559755605|gb|AYTI01000012.1| 34517 37507 2 + 2991 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65928.peg.1197 CDS gi|559755605|gb|AYTI01000012.1| 37508 37966 2 + 459 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65928.peg.1198 CDS gi|559755605|gb|AYTI01000012.1| 37966 39504 1 + 1539 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65928.peg.1199 CDS gi|559755605|gb|AYTI01000012.1| 39504 39923 3 + 420 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65928.peg.1200 CDS gi|559755605|gb|AYTI01000012.1| 39923 40189 2 + 267 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65928.peg.1201 CDS gi|559755605|gb|AYTI01000012.1| 40189 40497 1 + 309 hypothetical protein - none -
fig|6666666.65928.peg.1202 CDS gi|559755605|gb|AYTI01000012.1| 40619 41404 2 + 786 two-component sensor protein - none -
fig|6666666.65928.peg.1203 CDS gi|559755605|gb|AYTI01000012.1| 41397 42098 3 + 702 two-component regulatory protein - none -
fig|6666666.65928.peg.1204 CDS gi|559755605|gb|AYTI01000012.1| 42228 43598 3 + 1371 Glycerol-3-phosphate transporter Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65928.peg.1205 CDS gi|559755605|gb|AYTI01000012.1| 43677 44678 3 + 1002 iron ABC transporter substrate-binding protein - none -
fig|6666666.65928.peg.1206 CDS gi|559755605|gb|AYTI01000012.1| 44687 46228 2 + 1542 Putative transport system permease (iron) - none -
fig|6666666.65928.peg.1207 CDS gi|559755605|gb|AYTI01000012.1| 46219 47271 1 + 1053 FIG00547503: hypothetical protein - none -
fig|6666666.65928.peg.1208 CDS gi|559755605|gb|AYTI01000012.1| 48269 47325 -2 - 945 hypothetical protein - none -
fig|6666666.65928.peg.1209 CDS gi|559755605|gb|AYTI01000012.1| 48892 48269 -1 - 624 hypothetical protein - none -
fig|6666666.65928.peg.1210 CDS gi|559755605|gb|AYTI01000012.1| 49857 48907 -3 - 951 hypothetical protein - none -
fig|6666666.65928.peg.1211 CDS gi|559755605|gb|AYTI01000012.1| 50561 49860 -2 - 702 hypothetical protein - none -
fig|6666666.65928.peg.1212 CDS gi|559755605|gb|AYTI01000012.1| 52336 50798 -1 - 1539 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65928.peg.1213 CDS gi|559755605|gb|AYTI01000012.1| 52484 53047 2 + 564 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65928.peg.1214 CDS gi|559755605|gb|AYTI01000012.1| 54144 53113 -3 - 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65928.peg.1215 CDS gi|559755605|gb|AYTI01000012.1| 57677 54450 -2 - 3228 FIG00549254: hypothetical protein - none -
fig|6666666.65928.peg.1216 CDS gi|559755605|gb|AYTI01000012.1| 59299 58034 -1 - 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65928.peg.1217 CDS gi|559755605|gb|AYTI01000012.1| 61146 59542 -3 - 1605 ABC transporter membrane-spanning protein - none -
fig|6666666.65928.peg.1218 CDS gi|559755605|gb|AYTI01000012.1| 62150 61143 -2 - 1008 putative ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1219 CDS gi|559755605|gb|AYTI01000012.1| 62252 63097 2 + 846 FIG00544278: hypothetical protein - none -
fig|6666666.65928.peg.1220 CDS gi|559755605|gb|AYTI01000012.1| 64314 63118 -3 - 1197 FIG00546120: hypothetical protein - none -
fig|6666666.65928.peg.1221 CDS gi|559755605|gb|AYTI01000012.1| 64354 64467 1 + 114 hypothetical protein - none -
fig|6666666.65928.peg.1222 CDS gi|559755605|gb|AYTI01000012.1| 67805 64464 -2 - 3342 FIG00549311: hypothetical protein - none -
fig|6666666.65928.peg.1223 CDS gi|559755605|gb|AYTI01000012.1| 70076 68433 -2 - 1644 hypothetical protein - none -
fig|6666666.65928.peg.1224 CDS gi|559755605|gb|AYTI01000012.1| 71240 70656 -2 - 585 Putative mutase - none -
fig|6666666.65928.peg.1225 CDS gi|559755605|gb|AYTI01000012.1| 72319 71381 -1 - 939 Putative mutase - none -
fig|6666666.65928.peg.1226 CDS gi|559755605|gb|AYTI01000012.1| 73005 72340 -3 - 666 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65928.peg.1227 CDS gi|559755605|gb|AYTI01000012.1| 74440 73064 -1 - 1377 Similar to tetracycline resistance protein - none -
fig|6666666.65928.peg.1228 CDS gi|559755605|gb|AYTI01000012.1| 75169 74453 -1 - 717 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.65928.peg.1229 CDS gi|559755605|gb|AYTI01000012.1| 76355 75417 -2 - 939 Deoxyribonucleoside regulator DeoR (transcriptional repressor) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65928.peg.1230 CDS gi|559755605|gb|AYTI01000012.1| 76584 78401 3 + 1818 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65928.peg.1231 CDS gi|559755605|gb|AYTI01000012.1| 78490 79233 1 + 744 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.65928.peg.1232 CDS gi|559755605|gb|AYTI01000012.1| 80319 79306 -3 - 1014 Chromosome partition protein smc - none -
fig|6666666.65928.peg.1233 CDS gi|559755605|gb|AYTI01000012.1| 80792 81838 2 + 1047 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.65928.peg.1234 CDS gi|559755605|gb|AYTI01000012.1| 81850 83124 1 + 1275 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65928.peg.1235 CDS gi|559755605|gb|AYTI01000012.1| 83124 83876 3 + 753 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65928.peg.1236 CDS gi|559755605|gb|AYTI01000012.1| 84358 84486 1 + 129 hypothetical protein - none -
fig|6666666.65928.peg.1237 CDS gi|559755605|gb|AYTI01000012.1| 85587 84553 -3 - 1035 Putative secreted protein - none -
fig|6666666.65928.peg.1238 CDS gi|559755605|gb|AYTI01000012.1| 86513 85668 -2 - 846 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65928.peg.1239 CDS gi|559755605|gb|AYTI01000012.1| 86610 87329 3 + 720 transcriptional regulator, GntR family - none -
fig|6666666.65928.peg.1240 CDS gi|559755605|gb|AYTI01000012.1| 87472 88899 1 + 1428 FIG00549167: hypothetical protein - none -
fig|6666666.65928.peg.1241 CDS gi|559755605|gb|AYTI01000012.1| 88929 89837 3 + 909 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) - none -
fig|6666666.65928.peg.1242 CDS gi|559755605|gb|AYTI01000012.1| 89837 91174 2 + 1338 Gluconate permease D-gluconate and ketogluconates metabolism
fig|6666666.65928.peg.1243 CDS gi|559755605|gb|AYTI01000012.1| 91838 91182 -2 - 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65928.peg.1244 CDS gi|559755605|gb|AYTI01000012.1| 92272 91952 -1 - 321 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65928.peg.1245 CDS gi|559755605|gb|AYTI01000012.1| 95078 92376 -2 - 2703 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65928.peg.1246 CDS gi|559755605|gb|AYTI01000012.1| 95640 95092 -3 - 549 FIG00544659: hypothetical protein - none -
fig|6666666.65928.peg.1247 CDS gi|559755605|gb|AYTI01000012.1| 95599 95733 1 + 135 hypothetical protein - none -
fig|6666666.65928.peg.1248 CDS gi|559755605|gb|AYTI01000012.1| 97021 95744 -1 - 1278 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65928.peg.1249 CDS gi|559755605|gb|AYTI01000012.1| 97316 97176 -2 - 141 hypothetical protein - none -
fig|6666666.65928.peg.1250 CDS gi|559755605|gb|AYTI01000012.1| 97776 98600 3 + 825 5-keto-D-gluconate 5-reductase (EC 1.1.1.69) D-gluconate and ketogluconates metabolism
fig|6666666.65928.peg.1251 CDS gi|559755605|gb|AYTI01000012.1| 98603 99592 2 + 990 L-idonate 5-dehydrogenase (EC 1.1.1.264) D-gluconate and ketogluconates metabolism
fig|6666666.65928.peg.1252 CDS gi|559755605|gb|AYTI01000012.1| 99604 100080 1 + 477 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.65928.peg.1253 CDS gi|559755605|gb|AYTI01000012.1| 101452 100064 -1 - 1389 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.65928.peg.1254 CDS gi|559755605|gb|AYTI01000012.1| 102498 101686 -3 - 813 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65928.peg.1255 CDS gi|559755605|gb|AYTI01000012.1| 103780 102539 -1 - 1242 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65928.peg.1256 CDS gi|559755605|gb|AYTI01000012.1| 106216 103829 -1 - 2388 putative membrane protein - none -
fig|6666666.65928.peg.1257 CDS gi|559755605|gb|AYTI01000012.1| 107086 106631 -1 - 456 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.65928.peg.1258 CDS gi|559755605|gb|AYTI01000012.1| 107556 107104 -3 - 453 FIG00544249: hypothetical protein - none -
fig|6666666.65928.peg.1259 CDS gi|559755605|gb|AYTI01000012.1| 107594 108607 2 + 1014 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65928.peg.1260 CDS gi|559755605|gb|AYTI01000012.1| 109581 108721 -3 - 861 hypothetical protein - none -
fig|6666666.65928.peg.1261 CDS gi|559755605|gb|AYTI01000012.1| 110294 109728 -2 - 567 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65928.peg.1262 CDS gi|559755605|gb|AYTI01000012.1| 111184 110288 -1 - 897 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65928.peg.1263 CDS gi|559755605|gb|AYTI01000012.1| 111274 112659 1 + 1386 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65928.peg.1264 CDS gi|559755605|gb|AYTI01000012.1| 112863 113549 3 + 687 hypothetical protein - none -
fig|6666666.65928.peg.1265 CDS gi|559755605|gb|AYTI01000012.1| 113789 113580 -2 - 210 hypothetical protein - none -
fig|6666666.65928.peg.1266 CDS gi|559755606|gb|AYTI01000011.1| 1261 890 -1 - 372 CRISPR-associated protein, Cas2 - none -
fig|6666666.65928.peg.1267 CDS gi|559755606|gb|AYTI01000011.1| 2215 1262 -1 - 954 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.65928.peg.1268 CDS gi|559755606|gb|AYTI01000011.1| 4905 2212 -3 - 2694 CRISPR-associated helicase Cas3, protein CRISPRs
fig|6666666.65928.peg.1269 CDS gi|559755606|gb|AYTI01000011.1| 5636 4926 -2 - 711 CRISPR-associated protein, Cse3 family CRISPRs
fig|6666666.65928.peg.1270 CDS gi|559755606|gb|AYTI01000011.1| 5635 5763 1 + 129 hypothetical protein - none -
fig|6666666.65928.peg.1271 CDS gi|559755606|gb|AYTI01000011.1| 5852 7465 2 + 1614 No significant database matches - none -
fig|6666666.65928.peg.1272 CDS gi|559755606|gb|AYTI01000011.1| 7501 8055 1 + 555 No significant database matches - none -
fig|6666666.65928.peg.1273 CDS gi|559755606|gb|AYTI01000011.1| 8055 9122 3 + 1068 CRISPR-associated protein, CT1975 family - none -
fig|6666666.65928.peg.1274 CDS gi|559755606|gb|AYTI01000011.1| 9134 9826 2 + 693 hypothetical protein - none -
fig|6666666.65928.peg.1275 CDS gi|559755606|gb|AYTI01000011.1| 10937 9903 -2 - 1035 transposase for IS3509b - none -
fig|6666666.65928.peg.1276 CDS gi|559755606|gb|AYTI01000011.1| 11352 12275 3 + 924 Phospholipase D precursor (EC 3.1.4.4) (PLD) (Choline phosphatase) - none -
fig|6666666.65928.peg.1277 CDS gi|559755606|gb|AYTI01000011.1| 13171 12335 -1 - 837 Putative iron-siderophore uptake system ATP-binding component - none -
fig|6666666.65928.peg.1278 CDS gi|559755606|gb|AYTI01000011.1| 14169 13180 -3 - 990 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65928.peg.1279 CDS gi|559755606|gb|AYTI01000011.1| 15233 14166 -2 - 1068 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65928.peg.1280 CDS gi|559755606|gb|AYTI01000011.1| 15280 16332 1 + 1053 hypothetical protein - none -
fig|6666666.65928.peg.1281 CDS gi|559755606|gb|AYTI01000011.1| 16780 16511 -1 - 270 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65928.peg.1282 CDS gi|559755606|gb|AYTI01000011.1| 18887 16893 -2 - 1995 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65928.peg.1283 CDS gi|559755606|gb|AYTI01000011.1| 20404 18884 -1 - 1521 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65928.peg.1284 CDS gi|559755606|gb|AYTI01000011.1| 21872 20412 -2 - 1461 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.1285 CDS gi|559755606|gb|AYTI01000011.1| 23242 21869 -1 - 1374 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65928.peg.1286 CDS gi|559755606|gb|AYTI01000011.1| 24754 23243 -1 - 1512 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65928.peg.1287 CDS gi|559755606|gb|AYTI01000011.1| 25233 24754 -3 - 480 FIG00818182: hypothetical protein - none -
fig|6666666.65928.peg.1288 CDS gi|559755606|gb|AYTI01000011.1| 26266 25310 -1 - 957 FIG00543872: hypothetical protein - none -
fig|6666666.65928.peg.1289 CDS gi|559755607|gb|AYTI01000010.1| 166 342 1 + 177 Transcriptional regulator, MarR family - none -
fig|6666666.65928.peg.1290 CDS gi|559755607|gb|AYTI01000010.1| 446 643 2 + 198 hypothetical protein - none -
fig|6666666.65928.peg.1291 CDS gi|559755607|gb|AYTI01000010.1| 1055 696 -2 - 360 hypothetical protein - none -
fig|6666666.65928.peg.1292 CDS gi|559755607|gb|AYTI01000010.1| 1441 1950 1 + 510 transcriptional regulator, DeoR family - none -
fig|6666666.65928.peg.1293 CDS gi|559755607|gb|AYTI01000010.1| 2270 1965 -2 - 306 hypothetical protein - none -
fig|6666666.65928.peg.1294 CDS gi|559755607|gb|AYTI01000010.1| 2653 2796 1 + 144 hypothetical protein - none -
fig|6666666.65928.peg.1295 CDS gi|559755607|gb|AYTI01000010.1| 3833 3204 -2 - 630 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.65928.peg.1296 CDS gi|559755607|gb|AYTI01000010.1| 5380 3836 -1 - 1545 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.65928.peg.1297 CDS gi|559755607|gb|AYTI01000010.1| 6162 5377 -3 - 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.65928.peg.1298 CDS gi|559755607|gb|AYTI01000010.1| 6636 8225 3 + 1590 L-lactate permease Lactate utilization
fig|6666666.65928.peg.1299 CDS gi|559755607|gb|AYTI01000010.1| 8237 9889 2 + 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65928.peg.1300 CDS gi|559755607|gb|AYTI01000010.1| 9892 11223 1 + 1332 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.1301 CDS gi|559755607|gb|AYTI01000010.1| 11310 11513 3 + 204 hypothetical protein - none -
fig|6666666.65928.peg.1302 CDS gi|559755607|gb|AYTI01000010.1| 11523 12851 3 + 1329 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65928.peg.1303 CDS gi|559755607|gb|AYTI01000010.1| 12881 13804 2 + 924 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65928.peg.1304 CDS gi|559755607|gb|AYTI01000010.1| 14460 13801 -3 - 660 FIG00544995: hypothetical protein - none -
fig|6666666.65928.peg.1305 CDS gi|559755607|gb|AYTI01000010.1| 16415 14679 -2 - 1737 acyl-CoA synthetase - none -
fig|6666666.65928.peg.1306 CDS gi|559755607|gb|AYTI01000010.1| 16607 18934 2 + 2328 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65928.peg.1307 CDS gi|559755607|gb|AYTI01000010.1| 18934 20004 1 + 1071 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.65928.peg.1308 CDS gi|559755607|gb|AYTI01000010.1| 20065 20832 1 + 768 Methylase of polypeptide chain release factors - none -
fig|6666666.65928.peg.1309 CDS gi|559755607|gb|AYTI01000010.1| 20905 21555 1 + 651 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65928.peg.1310 CDS gi|559755607|gb|AYTI01000010.1| 21556 22710 1 + 1155 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.65928.peg.1311 CDS gi|559755607|gb|AYTI01000010.1| 22844 23263 2 + 420 ATP synthase protein I - none -
fig|6666666.65928.peg.1312 CDS gi|559755607|gb|AYTI01000010.1| 23889 24674 3 + 786 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1313 CDS gi|559755607|gb|AYTI01000010.1| 24764 25003 2 + 240 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1314 CDS gi|559755607|gb|AYTI01000010.1| 25037 25603 2 + 567 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1315 CDS gi|559755607|gb|AYTI01000010.1| 25609 26430 1 + 822 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1316 CDS gi|559755607|gb|AYTI01000010.1| 26492 28120 2 + 1629 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1317 CDS gi|559755607|gb|AYTI01000010.1| 28176 29156 3 + 981 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1318 CDS gi|559755607|gb|AYTI01000010.1| 29160 30605 3 + 1446 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1319 CDS gi|559755607|gb|AYTI01000010.1| 30619 30990 1 + 372 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65928.peg.1320 CDS gi|559755608|gb|AYTI01000009.1| 1181 2341 2 + 1161 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.65928.peg.1321 CDS gi|559755608|gb|AYTI01000009.1| 2390 3130 2 + 741 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.65928.peg.1322 CDS gi|559755608|gb|AYTI01000009.1| 3142 4593 1 + 1452 levanase/invertase - none -
fig|6666666.65928.peg.1323 CDS gi|559755608|gb|AYTI01000009.1| 5534 4668 -2 - 867 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) - none -
fig|6666666.65928.peg.1324 CDS gi|559755608|gb|AYTI01000009.1| 5731 5564 -1 - 168 FIG00545868: hypothetical protein - none -
fig|6666666.65928.peg.1325 CDS gi|559755608|gb|AYTI01000009.1| 6097 5810 -1 - 288 hypothetical protein - none -
fig|6666666.65928.peg.1326 CDS gi|559755608|gb|AYTI01000009.1| 6860 6126 -2 - 735 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.65928.peg.1327 CDS gi|559755608|gb|AYTI01000009.1| 7714 6857 -1 - 858 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.65928.peg.1328 CDS gi|559755608|gb|AYTI01000009.1| 8498 7707 -2 - 792 FIG01121566: hypothetical protein - none -
fig|6666666.65928.peg.1329 CDS gi|559755608|gb|AYTI01000009.1| 9580 8507 -1 - 1074 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.1330 CDS gi|559755608|gb|AYTI01000009.1| 9642 10577 3 + 936 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.1331 CDS gi|559755608|gb|AYTI01000009.1| 10662 12026 3 + 1365 Phenylalanine-specific permease - none -
fig|6666666.65928.peg.1332 CDS gi|559755608|gb|AYTI01000009.1| 12037 13011 1 + 975 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.1333 CDS gi|559755608|gb|AYTI01000009.1| 13104 14513 3 + 1410 Phenylalanine-specific permease - none -
fig|6666666.65928.peg.1334 CDS gi|559755608|gb|AYTI01000009.1| 14591 15763 2 + 1173 hypothetical protein - none -
fig|6666666.65928.peg.1335 CDS gi|559755608|gb|AYTI01000009.1| 16322 15765 -2 - 558 FIG00544080: hypothetical protein - none -
fig|6666666.65928.peg.1336 CDS gi|559755608|gb|AYTI01000009.1| 17630 16536 -2 - 1095 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.1337 CDS gi|559755608|gb|AYTI01000009.1| 17970 17653 -3 - 318 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.65928.peg.1338 CDS gi|559755608|gb|AYTI01000009.1| 18420 18019 -3 - 402 hypothetical membrane protein - none -
fig|6666666.65928.peg.1339 CDS gi|559755608|gb|AYTI01000009.1| 19309 18425 -1 - 885 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65928.peg.1340 CDS gi|559755608|gb|AYTI01000009.1| 20232 19309 -3 - 924 LpqW - none -
fig|6666666.65928.peg.1341 CDS gi|559755608|gb|AYTI01000009.1| 20864 20370 -2 - 495 LpqW - none -
fig|6666666.65928.peg.1342 CDS gi|559755608|gb|AYTI01000009.1| 22785 20875 -3 - 1911 GTP-binding protein TypA/BipA - none -
fig|6666666.65928.peg.1343 CDS gi|559755608|gb|AYTI01000009.1| 23157 23867 3 + 711 FIG00544264: hypothetical protein - none -
fig|6666666.65928.peg.1344 CDS gi|559755608|gb|AYTI01000009.1| 23867 24400 2 + 534 FIG00544603: hypothetical protein - none -
fig|6666666.65928.peg.1345 CDS gi|559755608|gb|AYTI01000009.1| 24397 24741 1 + 345 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Transcription repair cluster
fig|6666666.65928.peg.1346 CDS gi|559755608|gb|AYTI01000009.1| 24742 25482 1 + 741 FIG00548480: hypothetical protein - none -
fig|6666666.65928.peg.1347 CDS gi|559755608|gb|AYTI01000009.1| 28149 25558 -3 - 2592 hypothetical protein - none -
fig|6666666.65928.peg.1348 CDS gi|559755608|gb|AYTI01000009.1| 28835 28149 -2 - 687 ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1349 CDS gi|559755608|gb|AYTI01000009.1| 29368 28832 -1 - 537 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65928.peg.1350 CDS gi|559755608|gb|AYTI01000009.1| 31212 29536 -3 - 1677 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1351 CDS gi|559755608|gb|AYTI01000009.1| 32177 31218 -2 - 960 ABC-type transporter, permease component - none -
fig|6666666.65928.peg.1352 CDS gi|559755608|gb|AYTI01000009.1| 33096 32170 -3 - 927 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65928.peg.1353 CDS gi|559755608|gb|AYTI01000009.1| 34769 33189 -2 - 1581 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.65928.peg.1354 CDS gi|559755608|gb|AYTI01000009.1| 35408 35022 -2 - 387 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65928.peg.1355 CDS gi|559755608|gb|AYTI01000009.1| 35872 35405 -1 - 468 FIG00546937: hypothetical protein - none -
fig|6666666.65928.peg.1356 CDS gi|559755608|gb|AYTI01000009.1| 36624 35869 -3 - 756 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65928.peg.1357 CDS gi|559755608|gb|AYTI01000009.1| 38021 36621 -2 - 1401 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.65928.peg.1358 CDS gi|559755608|gb|AYTI01000009.1| 38235 38113 -3 - 123 hypothetical protein - none -
fig|6666666.65928.peg.1359 CDS gi|559755608|gb|AYTI01000009.1| 38933 38319 -2 - 615 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.65928.peg.1360 CDS gi|559755608|gb|AYTI01000009.1| 39969 39085 -3 - 885 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.65928.peg.1361 CDS gi|559755608|gb|AYTI01000009.1| 40069 40995 1 + 927 Membrane protein, putative - none -
fig|6666666.65928.peg.1362 CDS gi|559755608|gb|AYTI01000009.1| 41191 43515 1 + 2325 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.65928.peg.1363 CDS gi|559755608|gb|AYTI01000009.1| 43665 45254 3 + 1590 hypothetical protein - none -
fig|6666666.65928.peg.1364 CDS gi|559755608|gb|AYTI01000009.1| 45293 46909 2 + 1617 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65928.peg.1365 CDS gi|559755608|gb|AYTI01000009.1| 47271 46975 -3 - 297 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.65928.peg.1366 CDS gi|559755608|gb|AYTI01000009.1| 47494 48033 1 + 540 hypothetical protein - none -
fig|6666666.65928.peg.1367 CDS gi|559755608|gb|AYTI01000009.1| 49237 48152 -1 - 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65928.peg.1368 CDS gi|559755608|gb|AYTI01000009.1| 49497 50948 3 + 1452 FIG00546199: hypothetical protein - none -
fig|6666666.65928.peg.1369 CDS gi|559755608|gb|AYTI01000009.1| 51096 51911 3 + 816 FIG00544176: hypothetical protein - none -
fig|6666666.65928.peg.1370 CDS gi|559755608|gb|AYTI01000009.1| 53007 51982 -3 - 1026 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65928.peg.1371 CDS gi|559755608|gb|AYTI01000009.1| 53106 54347 3 + 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65928.peg.1372 CDS gi|559755608|gb|AYTI01000009.1| 54399 54689 3 + 291 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65928.peg.1373 CDS gi|559755608|gb|AYTI01000009.1| 55284 54715 -3 - 570 FIG00820022: hypothetical protein - none -
fig|6666666.65928.peg.1374 CDS gi|559755608|gb|AYTI01000009.1| 55585 56595 1 + 1011 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.1375 CDS gi|559755608|gb|AYTI01000009.1| 56690 56574 -2 - 117 hypothetical protein - none -
fig|6666666.65928.peg.1376 CDS gi|559755608|gb|AYTI01000009.1| 56797 58260 1 + 1464 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65928.peg.1377 CDS gi|559755608|gb|AYTI01000009.1| 58514 59050 2 + 537 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.1378 CDS gi|559755608|gb|AYTI01000009.1| 59047 60621 1 + 1575 permease of the major facilitator superfamily - none -
fig|6666666.65928.peg.1379 CDS gi|559755608|gb|AYTI01000009.1| 61248 60688 -3 - 561 sortase or related acyltransferase - none -
fig|6666666.65928.peg.1380 CDS gi|559755608|gb|AYTI01000009.1| 61911 61327 -3 - 585 FIG00544545: hypothetical protein - none -
fig|6666666.65928.peg.1381 CDS gi|559755608|gb|AYTI01000009.1| 62794 62102 -1 - 693 putative LysR-family transcriptional regulator - none -
fig|6666666.65928.peg.1382 CDS gi|559755608|gb|AYTI01000009.1| 62775 63227 3 + 453 FIG00546727: hypothetical protein - none -
fig|6666666.65928.peg.1383 CDS gi|559755608|gb|AYTI01000009.1| 63494 64123 2 + 630 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.1384 CDS gi|559755608|gb|AYTI01000009.1| 64187 65893 2 + 1707 Permeases of the major facilitator superfamily - none -
fig|6666666.65928.peg.1385 CDS gi|559755608|gb|AYTI01000009.1| 67264 65975 -1 - 1290 Serine hydroxymethyltransferase (EC 2.1.2.1) Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.65928.peg.1386 CDS gi|559755608|gb|AYTI01000009.1| 67581 68441 3 + 861 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65928.peg.1387 CDS gi|559755608|gb|AYTI01000009.1| 68938 68438 -1 - 501 FIG00544436: hypothetical protein - none -
fig|6666666.65928.peg.1388 CDS gi|559755608|gb|AYTI01000009.1| 69732 68935 -3 - 798 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65928.peg.1389 CDS gi|559755608|gb|AYTI01000009.1| 70089 69802 -3 - 288 FIG00543949: hypothetical protein - none -
fig|6666666.65928.peg.1390 CDS gi|559755608|gb|AYTI01000009.1| 70286 70399 2 + 114 hypothetical protein - none -
fig|6666666.65928.peg.1391 CDS gi|559755608|gb|AYTI01000009.1| 71314 70424 -1 - 891 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65928.peg.1392 CDS gi|559755608|gb|AYTI01000009.1| 71527 71988 1 + 462 FIG00544319: hypothetical protein - none -
fig|6666666.65928.peg.1393 CDS gi|559755608|gb|AYTI01000009.1| 72257 72778 2 + 522 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65928.peg.1394 CDS gi|559755608|gb|AYTI01000009.1| 73046 72801 -2 - 246 hypothetical protein - none -
fig|6666666.65928.peg.1395 CDS gi|559755608|gb|AYTI01000009.1| 73180 73293 1 + 114 hypothetical protein - none -
fig|6666666.65928.peg.1396 CDS gi|559755608|gb|AYTI01000009.1| 74171 73350 -2 - 822 FIG00543890: hypothetical protein - none -
fig|6666666.65928.peg.1397 CDS gi|559755608|gb|AYTI01000009.1| 75407 74289 -2 - 1119 Transcriptional regulator, AraC family - none -
fig|6666666.65928.peg.1398 CDS gi|559755608|gb|AYTI01000009.1| 77132 76161 -2 - 972 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65928.peg.1399 CDS gi|559755608|gb|AYTI01000009.1| 77695 77129 -1 - 567 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65928.peg.1400 CDS gi|559755608|gb|AYTI01000009.1| 78300 77758 -3 - 543 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65928.peg.1401 CDS gi|559755608|gb|AYTI01000009.1| 79748 78471 -2 - 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.1402 CDS gi|559755608|gb|AYTI01000009.1| 79904 79752 -2 - 153 hypothetical protein - none -
fig|6666666.65928.peg.1403 CDS gi|559755608|gb|AYTI01000009.1| 80730 79981 -3 - 750 FIG00997322: hypothetical protein - none -
fig|6666666.65928.peg.1404 CDS gi|559755608|gb|AYTI01000009.1| 81467 80862 -2 - 606 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65928.peg.1405 CDS gi|559755608|gb|AYTI01000009.1| 81730 82680 1 + 951 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.65928.peg.1406 CDS gi|559755608|gb|AYTI01000009.1| 82677 83219 3 + 543 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.65928.peg.1407 CDS gi|559755608|gb|AYTI01000009.1| 87220 83429 -1 - 3792 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.65928.peg.1408 CDS gi|559755608|gb|AYTI01000009.1| 87177 87308 3 + 132 hypothetical protein - none -
fig|6666666.65928.peg.1409 CDS gi|559755608|gb|AYTI01000009.1| 87952 87305 -1 - 648 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.1410 CDS gi|559755608|gb|AYTI01000009.1| 89394 88240 -3 - 1155 FIG00548642: hypothetical protein - none -
fig|6666666.65928.peg.1411 CDS gi|559755608|gb|AYTI01000009.1| 91060 89489 -1 - 1572 Multicopper oxidase Copper homeostasis
fig|6666666.65928.peg.1412 CDS gi|559755608|gb|AYTI01000009.1| 91337 92800 2 + 1464 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65928.peg.1413 CDS gi|559755608|gb|AYTI01000009.1| 92812 93792 1 + 981 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.65928.peg.1414 CDS gi|559755608|gb|AYTI01000009.1| 93891 95765 3 + 1875 Glycogen debranching enzyme (EC 3.2.1.-) / Pullulanase (EC 3.2.1.41) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65928.peg.1415 CDS gi|559755608|gb|AYTI01000009.1| 96035 96172 2 + 138 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65928.peg.1416 CDS gi|559755608|gb|AYTI01000009.1| 96259 96657 1 + 399 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65928.peg.1417 CDS gi|559755608|gb|AYTI01000009.1| 96734 97294 2 + 561 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65928.peg.1418 CDS gi|559755608|gb|AYTI01000009.1| 97451 97272 -2 - 180 hypothetical protein - none -
fig|6666666.65928.peg.1419 CDS gi|559755608|gb|AYTI01000009.1| 98532 97510 -3 - 1023 dioxygenase( EC:1.13.11.32 ) - none -
fig|6666666.65928.peg.1420 CDS gi|559755608|gb|AYTI01000009.1| 98562 99209 3 + 648 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65928.peg.1421 CDS gi|559755608|gb|AYTI01000009.1| 99223 100077 1 + 855 putative oxidoreductase - none -
fig|6666666.65928.peg.1422 CDS gi|559755608|gb|AYTI01000009.1| 100178 101812 2 + 1635 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65928.peg.1423 CDS gi|559755608|gb|AYTI01000009.1| 102903 101884 -3 - 1020 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.65928.peg.1424 CDS gi|559755608|gb|AYTI01000009.1| 103636 102983 -1 - 654 hypothetical protein - none -
fig|6666666.65928.peg.1425 CDS gi|559755608|gb|AYTI01000009.1| 103847 103692 -2 - 156 hypothetical protein - none -
fig|6666666.65928.peg.1426 CDS gi|559755608|gb|AYTI01000009.1| 104203 105633 1 + 1431 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.1427 CDS gi|559755608|gb|AYTI01000009.1| 105969 106190 3 + 222 hypothetical protein - none -
fig|6666666.65928.peg.1428 CDS gi|559755608|gb|AYTI01000009.1| 106705 107955 1 + 1251 FIG00544244: hypothetical protein - none -
fig|6666666.65928.peg.1429 CDS gi|559755608|gb|AYTI01000009.1| 109022 107952 -2 - 1071 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.65928.peg.1430 CDS gi|559755608|gb|AYTI01000009.1| 109207 110025 1 + 819 hypothetical protein - none -
fig|6666666.65928.peg.1431 CDS gi|559755608|gb|AYTI01000009.1| 110053 110763 1 + 711 Riboflavin transporter PnuX Riboflavin, FMN and FAD metabolism
fig|6666666.65928.peg.1432 CDS gi|559755608|gb|AYTI01000009.1| 111711 110848 -3 - 864 FIG00545275: hypothetical protein - none -
fig|6666666.65928.peg.1433 CDS gi|559755608|gb|AYTI01000009.1| 112983 111757 -3 - 1227 putative secreted protein - none -
fig|6666666.65928.peg.1434 CDS gi|559755608|gb|AYTI01000009.1| 113495 112980 -2 - 516 putative RNA polymerase ECF-subfamily sigma factor - none -
fig|6666666.65928.peg.1435 CDS gi|559755608|gb|AYTI01000009.1| 113610 113497 -3 - 114 hypothetical protein - none -
fig|6666666.65928.peg.1436 CDS gi|559755608|gb|AYTI01000009.1| 114077 113640 -2 - 438 hypothetical protein - none -
fig|6666666.65928.peg.1437 CDS gi|559755608|gb|AYTI01000009.1| 114559 114236 -1 - 324 FIG00544339: hypothetical protein - none -
fig|6666666.65928.peg.1438 CDS gi|559755608|gb|AYTI01000009.1| 116422 114608 -1 - 1815 ABC transporter, ATP-binding protein - none -
fig|6666666.65928.peg.1439 CDS gi|559755608|gb|AYTI01000009.1| 117395 116436 -2 - 960 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65928.peg.1440 CDS gi|559755608|gb|AYTI01000009.1| 118276 117404 -1 - 873 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.65928.peg.1441 CDS gi|559755608|gb|AYTI01000009.1| 119500 118469 -1 - 1032 Cell wall-binding protein - none -
fig|6666666.65928.peg.1442 CDS gi|559755608|gb|AYTI01000009.1| 120800 119958 -2 - 843 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65928.peg.1443 CDS gi|559755608|gb|AYTI01000009.1| 122700 120868 -3 - 1833 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65928.peg.1444 CDS gi|559755608|gb|AYTI01000009.1| 123626 122721 -2 - 906 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65928.peg.1445 CDS gi|559755608|gb|AYTI01000009.1| 125292 123763 -3 - 1530 FIG00546395: hypothetical protein - none -
fig|6666666.65928.peg.1446 CDS gi|559755608|gb|AYTI01000009.1| 126804 125446 -3 - 1359 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.1447 CDS gi|559755609|gb|AYTI01000008.1| 664 1848 1 + 1185 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65928.peg.1448 CDS gi|559755609|gb|AYTI01000008.1| 2345 1851 -2 - 495 GCN5-related N-acetyltransferase - none -
fig|6666666.65928.peg.1449 CDS gi|559755609|gb|AYTI01000008.1| 4331 2367 -2 - 1965 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65928.peg.1450 CDS gi|559755609|gb|AYTI01000008.1| 5753 4398 -2 - 1356 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global
fig|6666666.65928.peg.1451 CDS gi|559755609|gb|AYTI01000008.1| 5878 6258 1 + 381 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65928.peg.1452 CDS gi|559755609|gb|AYTI01000008.1| 6356 6892 2 + 537 Transcriptional regulatory protein - none -
fig|6666666.65928.peg.1453 CDS gi|559755609|gb|AYTI01000008.1| 6978 7796 3 + 819 Rhomboid membrane family protein - none -
fig|6666666.65928.peg.1454 CDS gi|559755609|gb|AYTI01000008.1| 7863 8756 3 + 894 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.1455 CDS gi|559755609|gb|AYTI01000008.1| 8829 9596 3 + 768 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.65928.peg.1456 CDS gi|559755609|gb|AYTI01000008.1| 9626 10369 2 + 744 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.65928.peg.1457 CDS gi|559755609|gb|AYTI01000008.1| 10366 10989 1 + 624 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65928.peg.1458 CDS gi|559755609|gb|AYTI01000008.1| 11418 11059 -3 - 360 FIG00543835: hypothetical protein - none -
fig|6666666.65928.peg.1459 CDS gi|559755609|gb|AYTI01000008.1| 11851 11495 -1 - 357 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.65928.peg.1460 CDS gi|559755609|gb|AYTI01000008.1| 12352 12164 -1 - 189 hypothetical protein - none -
fig|6666666.65928.peg.1461 CDS gi|559755609|gb|AYTI01000008.1| 12642 12992 3 + 351 hypothetical protein - none -
fig|6666666.65928.peg.1462 CDS gi|559755609|gb|AYTI01000008.1| 13542 14948 3 + 1407 Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) Polysaccharide deacetylases
fig|6666666.65928.peg.1463 CDS gi|559755609|gb|AYTI01000008.1| 16432 15449 -1 - 984 uncharacterized membrane protein - none -
fig|6666666.65928.peg.1464 CDS gi|559755609|gb|AYTI01000008.1| 17146 16478 -1 - 669 DNA-binding response regulator, LuxR family - none -
fig|6666666.65928.peg.1465 CDS gi|559755609|gb|AYTI01000008.1| 18144 17101 -3 - 1044 hypothetical protein - none -
fig|6666666.65928.peg.1466 CDS gi|559755609|gb|AYTI01000008.1| 18440 18688 2 + 249 hypothetical protein - none -
fig|6666666.65928.peg.1467 CDS gi|559755609|gb|AYTI01000008.1| 18910 28008 1 + 9099 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65928.peg.1468 CDS gi|559755609|gb|AYTI01000008.1| 28143 28538 3 + 396 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65928.peg.1469 CDS gi|559755609|gb|AYTI01000008.1| 29195 28542 -2 - 654 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.1470 CDS gi|559755609|gb|AYTI01000008.1| 29715 29236 -3 - 480 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65928.peg.1471 CDS gi|559755609|gb|AYTI01000008.1| 29804 30079 2 + 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65928.peg.1472 CDS gi|559755609|gb|AYTI01000008.1| 30193 30537 1 + 345 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.65928.peg.1473 CDS gi|559755609|gb|AYTI01000008.1| 31107 30553 -3 - 555 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.1474 CDS gi|559755609|gb|AYTI01000008.1| 32312 31317 -2 - 996 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.65928.peg.1475 CDS gi|559755609|gb|AYTI01000008.1| 32987 32691 -2 - 297 hypothetical protein - none -
fig|6666666.65928.peg.1476 CDS gi|559755609|gb|AYTI01000008.1| 33019 34206 1 + 1188 putative lipoprotein - none -
fig|6666666.65928.peg.1477 CDS gi|559755609|gb|AYTI01000008.1| 35154 34270 -3 - 885 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65928.peg.1478 CDS gi|559755609|gb|AYTI01000008.1| 35053 35166 1 + 114 hypothetical protein - none -
fig|6666666.65928.peg.1479 CDS gi|559755609|gb|AYTI01000008.1| 35906 35277 -2 - 630 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65928.peg.1480 CDS gi|559755609|gb|AYTI01000008.1| 36805 36002 -1 - 804 short-chain dehydrogenase - none -
fig|6666666.65928.peg.1481 CDS gi|559755609|gb|AYTI01000008.1| 37940 36945 -2 - 996 Alcohol dehydrogenase (EC 1.1.1.1) Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.1482 CDS gi|559755609|gb|AYTI01000008.1| 38215 40056 1 + 1842 serine protease, subtilase family - none -
fig|6666666.65928.peg.1483 CDS gi|559755609|gb|AYTI01000008.1| 40599 40150 -3 - 450 hypothetical protein - none -
fig|6666666.65928.peg.1484 CDS gi|559755609|gb|AYTI01000008.1| 43894 41609 -1 - 2286 Carbon starvation protein A Carbon Starvation
fig|6666666.65928.peg.1485 CDS gi|559755609|gb|AYTI01000008.1| 44494 46539 1 + 2046 Copper resistance protein D Copper homeostasis
fig|6666666.65928.peg.1486 CDS gi|559755609|gb|AYTI01000008.1| 46700 47623 2 + 924 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.65928.peg.1487 CDS gi|559755609|gb|AYTI01000008.1| 47620 48378 1 + 759 Putative membrane protein - none -
fig|6666666.65928.peg.1488 CDS gi|559755609|gb|AYTI01000008.1| 49742 48411 -2 - 1332 hypothetical protein - none -
fig|6666666.65928.peg.1489 CDS gi|559755609|gb|AYTI01000008.1| 49804 49920 1 + 117 hypothetical protein - none -
fig|6666666.65928.peg.1490 CDS gi|559755609|gb|AYTI01000008.1| 50113 49937 -1 - 177 hypothetical protein - none -
fig|6666666.65928.peg.1491 CDS gi|559755609|gb|AYTI01000008.1| 51129 50152 -3 - 978 hypothetical protein - none -
fig|6666666.65928.peg.1492 CDS gi|559755609|gb|AYTI01000008.1| 52139 51126 -2 - 1014 hypothetical protein - none -
fig|6666666.65928.peg.1493 CDS gi|559755609|gb|AYTI01000008.1| 54739 52139 -1 - 2601 hypothetical protein - none -
fig|6666666.65928.peg.1494 CDS gi|559755609|gb|AYTI01000008.1| 56220 54736 -3 - 1485 hypothetical protein - none -
fig|6666666.65928.peg.1495 CDS gi|559755609|gb|AYTI01000008.1| 57806 56256 -2 - 1551 protein of unknown function DUF181 - none -
fig|6666666.65928.peg.1496 CDS gi|559755609|gb|AYTI01000008.1| 59521 57803 -1 - 1719 hypothetical protein - none -
fig|6666666.65928.peg.1497 CDS gi|559755609|gb|AYTI01000008.1| 59494 59769 1 + 276 hypothetical protein - none -
fig|6666666.65928.peg.1498 CDS gi|559755609|gb|AYTI01000008.1| 60172 60017 -1 - 156 hypothetical protein - none -
fig|6666666.65928.peg.1499 CDS gi|559755609|gb|AYTI01000008.1| 60056 60619 2 + 564 Putative single-strand binding protein - none -
fig|6666666.65928.peg.1500 CDS gi|559755609|gb|AYTI01000008.1| 60789 62459 3 + 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1501 CDS gi|559755609|gb|AYTI01000008.1| 62591 62719 2 + 129 hypothetical protein - none -
fig|6666666.65928.peg.1502 CDS gi|559755609|gb|AYTI01000008.1| 62739 63089 3 + 351 FIG00544139: hypothetical protein - none -
fig|6666666.65928.peg.1503 CDS gi|559755609|gb|AYTI01000008.1| 63095 63703 2 + 609 FIG01001213: hypothetical protein - none -
fig|6666666.65928.peg.1504 CDS gi|559755609|gb|AYTI01000008.1| 64603 63707 -1 - 897 FIG00547901: hypothetical protein - none -
fig|6666666.65928.peg.1505 CDS gi|559755609|gb|AYTI01000008.1| 65007 64615 -3 - 393 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65928.peg.1506 CDS gi|559755609|gb|AYTI01000008.1| 65992 65033 -1 - 960 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65928.peg.1507 CDS gi|559755609|gb|AYTI01000008.1| 68752 66137 -1 - 2616 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65928.peg.1508 CDS gi|559755609|gb|AYTI01000008.1| 68865 68981 3 + 117 hypothetical protein - none -
fig|6666666.65928.peg.1509 CDS gi|559755609|gb|AYTI01000008.1| 69055 69675 1 + 621 FIG00544229: hypothetical protein - none -
fig|6666666.65928.peg.1510 CDS gi|559755609|gb|AYTI01000008.1| 69937 70371 1 + 435 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65928.peg.1511 CDS gi|559755609|gb|AYTI01000008.1| 70489 71499 1 + 1011 hypothetical protein - none -
fig|6666666.65928.peg.1512 CDS gi|559755609|gb|AYTI01000008.1| 72385 71582 -1 - 804 FIG00997919: hypothetical protein - none -
fig|6666666.65928.peg.1513 CDS gi|559755609|gb|AYTI01000008.1| 72762 72520 -3 - 243 FIG00544802: hypothetical protein - none -
fig|6666666.65928.peg.1514 CDS gi|559755609|gb|AYTI01000008.1| 73644 74996 3 + 1353 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65928.peg.1515 CDS gi|559755609|gb|AYTI01000008.1| 75337 75936 1 + 600 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65928.peg.1516 CDS gi|559755609|gb|AYTI01000008.1| 75952 76581 1 + 630 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65928.peg.1517 CDS gi|559755609|gb|AYTI01000008.1| 76658 79420 2 + 2763 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65928.peg.1518 CDS gi|559755609|gb|AYTI01000008.1| 79592 80869 2 + 1278 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65928.peg.1519 CDS gi|559755609|gb|AYTI01000008.1| 81687 80929 -3 - 759 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.1520 CDS gi|559755609|gb|AYTI01000008.1| 82303 83283 1 + 981 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.65928.peg.1521 CDS gi|559755609|gb|AYTI01000008.1| 83448 86183 3 + 2736 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65928.peg.1522 CDS gi|559755609|gb|AYTI01000008.1| 86184 87746 3 + 1563 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65928.peg.1523 CDS gi|559755609|gb|AYTI01000008.1| 87743 88171 2 + 429 Possible membrane protein - none -
fig|6666666.65928.peg.1524 CDS gi|559755609|gb|AYTI01000008.1| 89146 88250 -1 - 897 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65928.peg.1525 CDS gi|559755609|gb|AYTI01000008.1| 89235 89654 3 + 420 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.65928.peg.1526 CDS gi|559755609|gb|AYTI01000008.1| 90553 89852 -1 - 702 hypothetical protein - none -
fig|6666666.65928.peg.1527 CDS gi|559755609|gb|AYTI01000008.1| 90978 94361 3 + 3384 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.65928.peg.1528 CDS gi|559755609|gb|AYTI01000008.1| 94594 94899 1 + 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65928.peg.1529 CDS gi|559755609|gb|AYTI01000008.1| 94939 95205 1 + 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65928.peg.1530 CDS gi|559755609|gb|AYTI01000008.1| 95342 95202 -2 - 141 hypothetical protein - none -
fig|6666666.65928.peg.1531 CDS gi|559755609|gb|AYTI01000008.1| 95499 97025 3 + 1527 COG0536: GTP-binding protein Obg - none -
fig|6666666.65928.peg.1532 CDS gi|559755609|gb|AYTI01000008.1| 97092 98345 3 + 1254 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.65928.peg.1533 CDS gi|559755609|gb|AYTI01000008.1| 99977 98385 -2 - 1593 YidE/YbjL duplication - none -
fig|6666666.65928.peg.1534 CDS gi|559755609|gb|AYTI01000008.1| 100432 100085 -1 - 348 Hypothetical protein DUF454 - none -
fig|6666666.65928.peg.1535 CDS gi|559755609|gb|AYTI01000008.1| 100627 101541 1 + 915 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65928.peg.1536 CDS gi|559755609|gb|AYTI01000008.1| 101600 102886 2 + 1287 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65928.peg.1537 CDS gi|559755609|gb|AYTI01000008.1| 102924 103580 3 + 657 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65928.peg.1538 CDS gi|559755609|gb|AYTI01000008.1| 103635 104102 3 + 468 Iojap protein - none -
fig|6666666.65928.peg.1539 CDS gi|559755609|gb|AYTI01000008.1| 104107 104853 1 + 747 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.65928.peg.1540 CDS gi|559755609|gb|AYTI01000008.1| 104865 105695 3 + 831 Hypothetical protein DUF194, DegV family - none -
fig|6666666.65928.peg.1541 CDS gi|559755609|gb|AYTI01000008.1| 105823 106527 1 + 705 Putative competence protein ComEA - none -
fig|6666666.65928.peg.1542 CDS gi|559755609|gb|AYTI01000008.1| 106524 108197 3 + 1674 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.65928.peg.1543 CDS gi|559755609|gb|AYTI01000008.1| 108245 109207 2 + 963 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65928.peg.1544 CDS gi|559755609|gb|AYTI01000008.1| 109218 109619 3 + 402 ankyrin repeat containing protein - none -
fig|6666666.65928.peg.1545 CDS gi|559755609|gb|AYTI01000008.1| 109609 110256 1 + 648 L-lysine permease - none -
fig|6666666.65928.peg.1546 CDS gi|559755609|gb|AYTI01000008.1| 110618 110355 -2 - 264 SSU ribosomal protein S20p - none -
fig|6666666.65928.peg.1547 CDS gi|559755609|gb|AYTI01000008.1| 111473 110925 -2 - 549 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65928.peg.1548 CDS gi|559755609|gb|AYTI01000008.1| 111661 113163 1 + 1503 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65928.peg.1549 CDS gi|559755609|gb|AYTI01000008.1| 113142 113519 3 + 378 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65928.peg.1550 CDS gi|559755609|gb|AYTI01000008.1| 113602 114195 1 + 594 hypothetical protein - none -
fig|6666666.65928.peg.1551 CDS gi|559755609|gb|AYTI01000008.1| 114327 114956 3 + 630 Putative ABC transport system ATP-binding protein - none -
fig|6666666.65928.peg.1552 CDS gi|559755609|gb|AYTI01000008.1| 114953 115660 2 + 708 FIG00547760: hypothetical protein - none -
fig|6666666.65928.peg.1553 CDS gi|559755609|gb|AYTI01000008.1| 115657 116904 1 + 1248 hypothetical protein - none -
fig|6666666.65928.peg.1554 CDS gi|559755609|gb|AYTI01000008.1| 116901 118409 3 + 1509 Putative secreted protein - none -
fig|6666666.65928.peg.1555 CDS gi|559755609|gb|AYTI01000008.1| 118415 120160 2 + 1746 Putative transport system membrane protein - none -
fig|6666666.65928.peg.1556 CDS gi|559755609|gb|AYTI01000008.1| 120352 120161 -1 - 192 hypothetical protein - none -
fig|6666666.65928.peg.1557 CDS gi|559755609|gb|AYTI01000008.1| 120357 120590 3 + 234 hypothetical protein - none -
fig|6666666.65928.peg.1558 CDS gi|559755609|gb|AYTI01000008.1| 120680 122002 2 + 1323 hypothetical protein - none -
fig|6666666.65928.peg.1559 CDS gi|559755609|gb|AYTI01000008.1| 122697 121999 -3 - 699 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism
fig|6666666.65928.peg.1560 CDS gi|559755609|gb|AYTI01000008.1| 122798 124084 2 + 1287 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.65928.peg.1561 CDS gi|559755609|gb|AYTI01000008.1| 124114 124248 1 + 135 hypothetical protein - none -
fig|6666666.65928.peg.1562 CDS gi|559755609|gb|AYTI01000008.1| 125673 124240 -3 - 1434 ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1563 CDS gi|559755609|gb|AYTI01000008.1| 126521 125670 -2 - 852 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65928.peg.1564 CDS gi|559755609|gb|AYTI01000008.1| 127476 126526 -3 - 951 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65928.peg.1565 CDS gi|559755609|gb|AYTI01000008.1| 129098 127476 -2 - 1623 Putative ABC transport system solute-binding secreted protein - none -
fig|6666666.65928.peg.1566 CDS gi|559755609|gb|AYTI01000008.1| 129107 130027 2 + 921 Auxin Efflux Carrier - none -
fig|6666666.65928.peg.1567 CDS gi|559755609|gb|AYTI01000008.1| 130046 130591 2 + 546 hypothetical membrane protein - none -
fig|6666666.65928.peg.1568 CDS gi|559755609|gb|AYTI01000008.1| 130637 132469 2 + 1833 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.65928.peg.1569 CDS gi|559755609|gb|AYTI01000008.1| 133637 132450 -2 - 1188 hypothetical protein - none -
fig|6666666.65928.peg.1570 CDS gi|559755609|gb|AYTI01000008.1| 134749 133763 -1 - 987 FIG00546307: hypothetical protein - none -
fig|6666666.65928.peg.1571 CDS gi|559755609|gb|AYTI01000008.1| 136076 134757 -2 - 1320 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65928.peg.1572 CDS gi|559755609|gb|AYTI01000008.1| 138068 136221 -2 - 1848 putative ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.1573 CDS gi|559755609|gb|AYTI01000008.1| 138192 138698 3 + 507 FIG00545146: hypothetical protein - none -
fig|6666666.65928.peg.1574 CDS gi|559755609|gb|AYTI01000008.1| 139002 139676 3 + 675 hypothetical protein - none -
fig|6666666.65928.peg.1575 CDS gi|559755609|gb|AYTI01000008.1| 139680 141227 3 + 1548 hypothetical protein - none -
fig|6666666.65928.peg.1576 CDS gi|559755609|gb|AYTI01000008.1| 141261 141815 3 + 555 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65928.peg.1577 CDS gi|559755609|gb|AYTI01000008.1| 143275 142004 -1 - 1272 FIG00547479: hypothetical protein - none -
fig|6666666.65928.peg.1578 CDS gi|559755609|gb|AYTI01000008.1| 143308 145386 1 + 2079 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.65928.peg.1579 CDS gi|559755609|gb|AYTI01000008.1| 145393 145611 1 + 219 hypothetical protein - none -
fig|6666666.65928.peg.1580 CDS gi|559755609|gb|AYTI01000008.1| 145654 145794 1 + 141 hypothetical protein - none -
fig|6666666.65928.peg.1581 CDS gi|559755609|gb|AYTI01000008.1| 148036 145850 -1 - 2187 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1582 CDS gi|559755609|gb|AYTI01000008.1| 148265 150100 2 + 1836 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.1583 CDS gi|559755609|gb|AYTI01000008.1| 150453 151133 3 + 681 FIG00543880: hypothetical protein - none -
fig|6666666.65928.peg.1584 CDS gi|559755609|gb|AYTI01000008.1| 151137 152291 3 + 1155 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65928.peg.1585 CDS gi|559755609|gb|AYTI01000008.1| 152365 153411 1 + 1047 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65928.peg.1586 CDS gi|559755609|gb|AYTI01000008.1| 153644 154780 2 + 1137 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65928.peg.1587 CDS gi|559755609|gb|AYTI01000008.1| 154798 155568 1 + 771 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended
fig|6666666.65928.peg.1588 CDS gi|559755609|gb|AYTI01000008.1| 155616 156653 3 + 1038 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.65928.peg.1589 CDS gi|559755609|gb|AYTI01000008.1| 156654 157244 3 + 591 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65928.peg.1590 CDS gi|559755609|gb|AYTI01000008.1| 157241 158572 2 + 1332 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65928.peg.1591 CDS gi|559755609|gb|AYTI01000008.1| 158741 158968 2 + 228 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65928.peg.1592 CDS gi|559755609|gb|AYTI01000008.1| 158968 159483 1 + 516 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65928.peg.1593 CDS gi|559755609|gb|AYTI01000008.1| 159581 160498 2 + 918 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65928.peg.1594 CDS gi|559755609|gb|AYTI01000008.1| 160531 161226 1 + 696 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65928.peg.1595 CDS gi|559755609|gb|AYTI01000008.1| 161246 161983 2 + 738 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65928.peg.1596 CDS gi|559755609|gb|AYTI01000008.1| 161980 163080 1 + 1101 FIG00544679: hypothetical protein - none -
fig|6666666.65928.peg.1597 CDS gi|559755610|gb|AYTI01000007.1| 1560 355 -3 - 1206 Putative phage integrase - none -
fig|6666666.65928.peg.1598 CDS gi|559755610|gb|AYTI01000007.1| 2687 1686 -2 - 1002 hypothetical protein - none -
fig|6666666.65928.peg.1599 CDS gi|559755610|gb|AYTI01000007.1| 3643 2804 -1 - 840 hypothetical protein - none -
fig|6666666.65928.peg.1600 CDS gi|559755610|gb|AYTI01000007.1| 4517 3645 -2 - 873 hypothetical protein - none -
fig|6666666.65928.peg.1601 CDS gi|559755610|gb|AYTI01000007.1| 4884 4474 -3 - 411 No significant database matches - none -
fig|6666666.65928.peg.1602 CDS gi|559755610|gb|AYTI01000007.1| 5402 4893 -2 - 510 No significant database matches - none -
fig|6666666.65928.peg.1603 CDS gi|559755610|gb|AYTI01000007.1| 5543 5764 2 + 222 hypothetical protein - none -
fig|6666666.65928.peg.1604 CDS gi|559755610|gb|AYTI01000007.1| 6237 5872 -3 - 366 hypothetical protein - none -
fig|6666666.65928.peg.1605 CDS gi|559755610|gb|AYTI01000007.1| 6357 6596 3 + 240 Putative transcriptional regulator - none -
fig|6666666.65928.peg.1606 CDS gi|559755610|gb|AYTI01000007.1| 6623 6841 2 + 219 hypothetical protein - none -
fig|6666666.65928.peg.1607 CDS gi|559755610|gb|AYTI01000007.1| 6979 7095 1 + 117 hypothetical protein - none -
fig|6666666.65928.peg.1608 CDS gi|559755610|gb|AYTI01000007.1| 7580 7092 -2 - 489 hypothetical protein - none -
fig|6666666.65928.peg.1609 CDS gi|559755610|gb|AYTI01000007.1| 7635 8021 3 + 387 hypothetical protein - none -
fig|6666666.65928.peg.1610 CDS gi|559755610|gb|AYTI01000007.1| 8611 8186 -1 - 426 hypothetical protein - none -
fig|6666666.65928.peg.1611 CDS gi|559755610|gb|AYTI01000007.1| 8649 9467 3 + 819 Phage antirepressor protein - none -
fig|6666666.65928.peg.1612 CDS gi|559755610|gb|AYTI01000007.1| 9487 9672 1 + 186 hypothetical protein - none -
fig|6666666.65928.peg.1613 CDS gi|559755610|gb|AYTI01000007.1| 9685 10143 1 + 459 hypothetical protein - none -
fig|6666666.65928.peg.1614 CDS gi|559755610|gb|AYTI01000007.1| 10156 10308 1 + 153 hypothetical protein - none -
fig|6666666.65928.peg.1615 CDS gi|559755610|gb|AYTI01000007.1| 10305 11045 3 + 741 No significant database matches - none -
fig|6666666.65928.peg.1616 CDS gi|559755610|gb|AYTI01000007.1| 11389 11231 -1 - 159 hypothetical protein - none -
fig|6666666.65928.peg.1617 CDS gi|559755610|gb|AYTI01000007.1| 11483 12358 2 + 876 No significant database matches - none -
fig|6666666.65928.peg.1618 CDS gi|559755610|gb|AYTI01000007.1| 12641 13192 2 + 552 No significant database matches - none -
fig|6666666.65928.peg.1619 CDS gi|559755610|gb|AYTI01000007.1| 13315 13596 1 + 282 Putative phage protein - none -
fig|6666666.65928.peg.1620 CDS gi|559755610|gb|AYTI01000007.1| 13753 14097 1 + 345 hypothetical protein - none -
fig|6666666.65928.peg.1621 CDS gi|559755610|gb|AYTI01000007.1| 14087 15688 2 + 1602 hypothetical protein - none -
fig|6666666.65928.peg.1622 CDS gi|559755610|gb|AYTI01000007.1| 15701 16951 2 + 1251 Phage portal (connector) protein - none -
fig|6666666.65928.peg.1623 CDS gi|559755610|gb|AYTI01000007.1| 16948 17991 1 + 1044 Phage capsid and scaffold Phage capsid proteins
fig|6666666.65928.peg.1624 CDS gi|559755610|gb|AYTI01000007.1| 17988 19238 3 + 1251 Phage major capsid protein Phage capsid proteins
fig|6666666.65928.peg.1625 CDS gi|559755610|gb|AYTI01000007.1| 19238 19423 2 + 186 No significant database matches - none -
fig|6666666.65928.peg.1626 CDS gi|559755610|gb|AYTI01000007.1| 19445 19927 2 + 483 Putative phage protein - none -
fig|6666666.65928.peg.1627 CDS gi|559755610|gb|AYTI01000007.1| 19924 20286 1 + 363 Phage protein - none -
fig|6666666.65928.peg.1628 CDS gi|559755610|gb|AYTI01000007.1| 20279 20545 2 + 267 Putative phage protein - none -
fig|6666666.65928.peg.1629 CDS gi|559755610|gb|AYTI01000007.1| 20535 20912 3 + 378 Putative phage protein - none -
fig|6666666.65928.peg.1630 CDS gi|559755610|gb|AYTI01000007.1| 20941 21888 1 + 948 Putative phage protein - none -
fig|6666666.65928.peg.1631 CDS gi|559755610|gb|AYTI01000007.1| 21986 22363 2 + 378 Putative phage protein - none -
fig|6666666.65928.peg.1632 CDS gi|559755610|gb|AYTI01000007.1| 22525 22734 1 + 210 No significant database matches - none -
fig|6666666.65928.peg.1633 CDS gi|559755610|gb|AYTI01000007.1| 22747 27210 1 + 4464 FIG00549867: hypothetical protein - none -
fig|6666666.65928.peg.1634 CDS gi|559755610|gb|AYTI01000007.1| 27207 28388 3 + 1182 FIG00549867: hypothetical protein - none -
fig|6666666.65928.peg.1635 CDS gi|559755610|gb|AYTI01000007.1| 28398 29150 3 + 753 immunity-specific protein Beta201 - none -
fig|6666666.65928.peg.1636 CDS gi|559755610|gb|AYTI01000007.1| 29151 30011 3 + 861 immunity-specific protein Beta286 - none -
fig|6666666.65928.peg.1637 CDS gi|559755610|gb|AYTI01000007.1| 30011 31111 2 + 1101 immunity-specific protein Beta371 - none -
fig|6666666.65928.peg.1638 CDS gi|559755610|gb|AYTI01000007.1| 31140 32027 3 + 888 Putative phage tail fiber protein - none -
fig|6666666.65928.peg.1639 CDS gi|559755610|gb|AYTI01000007.1| 32031 32330 3 + 300 hypothetical protein - none -
fig|6666666.65928.peg.1640 CDS gi|559755610|gb|AYTI01000007.1| 32409 33230 3 + 822 Teichoic acid phosphorylcholine esterase/choline binding protein E (cbpE) - none -
fig|6666666.65928.peg.1641 CDS gi|559755610|gb|AYTI01000007.1| 33223 33462 1 + 240 hypothetical protein - none -
fig|6666666.65928.peg.1642 CDS gi|559755610|gb|AYTI01000007.1| 33468 33944 3 + 477 Putative membrane protein - none -
fig|6666666.65928.peg.1643 CDS gi|559755610|gb|AYTI01000007.1| 33941 34288 2 + 348 Putative secreted protein - none -
fig|6666666.65928.peg.1644 CDS gi|559755610|gb|AYTI01000007.1| 34927 34757 -1 - 171 hypothetical protein - none -
fig|6666666.65928.peg.1645 CDS gi|559755610|gb|AYTI01000007.1| 34950 35123 3 + 174 hypothetical protein - none -
fig|6666666.65928.peg.1646 CDS gi|559755610|gb|AYTI01000007.1| 36776 35130 -2 - 1647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.1647 CDS gi|559755610|gb|AYTI01000007.1| 36987 37796 3 + 810 Putative secreted hydrolase - none -
fig|6666666.65928.peg.1648 CDS gi|559755610|gb|AYTI01000007.1| 38792 37923 -2 - 870 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65928.peg.1649 CDS gi|559755610|gb|AYTI01000007.1| 40202 38796 -2 - 1407 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.65928.peg.1650 CDS gi|559755610|gb|AYTI01000007.1| 41210 40206 -2 - 1005 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65928.peg.1651 CDS gi|559755610|gb|AYTI01000007.1| 42607 41234 -1 - 1374 aminopeptidase N - none -
fig|6666666.65928.peg.1652 CDS gi|559755610|gb|AYTI01000007.1| 44681 42600 -2 - 2082 Putative prolyl oligopeptidase family protein - none -
fig|6666666.65928.peg.1653 CDS gi|559755610|gb|AYTI01000007.1| 45846 44767 -3 - 1080 FIG00544202: hypothetical protein - none -
fig|6666666.65928.peg.1654 CDS gi|559755610|gb|AYTI01000007.1| 46248 46382 3 + 135 hypothetical protein - none -
fig|6666666.65928.peg.1655 CDS gi|559755610|gb|AYTI01000007.1| 46663 48072 1 + 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Glycine cleavage system;
TCA Cycle
fig|6666666.65928.peg.1656 CDS gi|559755610|gb|AYTI01000007.1| 49572 48145 -3 - 1428 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.65928.peg.1657 CDS gi|559755610|gb|AYTI01000007.1| 50272 50805 1 + 534 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65928.peg.1658 CDS gi|559755610|gb|AYTI01000007.1| 50825 52840 2 + 2016 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.65928.peg.1659 CDS gi|559755610|gb|AYTI01000007.1| 52840 53589 1 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.65928.peg.1660 CDS gi|559755610|gb|AYTI01000007.1| 53650 54000 1 + 351 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.65928.peg.1661 CDS gi|559755610|gb|AYTI01000007.1| 54061 54186 1 + 126 hypothetical protein - none -
fig|6666666.65928.peg.1662 CDS gi|559755610|gb|AYTI01000007.1| 54341 55648 2 + 1308 FIG00544632: hypothetical protein - none -
fig|6666666.65928.peg.1663 CDS gi|559755610|gb|AYTI01000007.1| 55711 56001 1 + 291 FIG00544701: hypothetical protein - none -
fig|6666666.65928.peg.1664 CDS gi|559755610|gb|AYTI01000007.1| 56008 56583 1 + 576 hypothetical protein - none -
fig|6666666.65928.peg.1665 CDS gi|559755610|gb|AYTI01000007.1| 56714 56580 -2 - 135 hypothetical protein - none -
fig|6666666.65928.peg.1666 CDS gi|559755610|gb|AYTI01000007.1| 57427 56954 -1 - 474 FIG00546356: hypothetical protein - none -
fig|6666666.65928.peg.1667 CDS gi|559755610|gb|AYTI01000007.1| 58387 57518 -1 - 870 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.65928.peg.1668 CDS gi|559755610|gb|AYTI01000007.1| 58819 58568 -1 - 252 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.65928.peg.1669 CDS gi|559755610|gb|AYTI01000007.1| 60967 58871 -1 - 2097 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.65928.peg.1670 CDS gi|559755610|gb|AYTI01000007.1| 62344 61517 -1 - 828 Methylase of polypeptide chain release factors - none -
fig|6666666.65928.peg.1671 CDS gi|559755610|gb|AYTI01000007.1| 62871 62368 -3 - 504 FIG00546961: hypothetical protein - none -
fig|6666666.65928.peg.1672 CDS gi|559755610|gb|AYTI01000007.1| 62895 64034 3 + 1140 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65928.peg.1673 CDS gi|559755610|gb|AYTI01000007.1| 65862 64156 -3 - 1707 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.1674 CDS gi|559755610|gb|AYTI01000007.1| 66160 67431 1 + 1272 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65928.peg.1675 CDS gi|559755610|gb|AYTI01000007.1| 67555 68301 1 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65928.peg.1676 CDS gi|559755610|gb|AYTI01000007.1| 68466 69560 3 + 1095 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65928.peg.1677 CDS gi|559755610|gb|AYTI01000007.1| 69561 70256 3 + 696 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65928.peg.1678 CDS gi|559755610|gb|AYTI01000007.1| 71305 70253 -1 - 1053 FIG01122970: hypothetical protein - none -
fig|6666666.65928.peg.1679 CDS gi|559755610|gb|AYTI01000007.1| 71305 72186 1 + 882 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65928.peg.1680 CDS gi|559755610|gb|AYTI01000007.1| 72183 73265 3 + 1083 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.65928.peg.1681 CDS gi|559755610|gb|AYTI01000007.1| 73362 74165 3 + 804 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65928.peg.1682 CDS gi|559755610|gb|AYTI01000007.1| 74190 74339 3 + 150 hypothetical protein - none -
fig|6666666.65928.peg.1683 CDS gi|559755610|gb|AYTI01000007.1| 74454 74645 3 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65928.peg.1684 CDS gi|559755610|gb|AYTI01000007.1| 74883 75059 3 + 177 conserved hypothetical 1 TMS, 30-80aa Actinobacteria protein - none -
fig|6666666.65928.peg.1685 CDS gi|559755610|gb|AYTI01000007.1| 75142 76026 1 + 885 Putative secreted protein - none -
fig|6666666.65928.peg.1686 CDS gi|559755610|gb|AYTI01000007.1| 75998 76843 2 + 846 cytochrome c biogenesis protein, transmembrane region - none -
fig|6666666.65928.peg.1687 CDS gi|559755610|gb|AYTI01000007.1| 77883 76840 -3 - 1044 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65928.peg.1688 CDS gi|559755610|gb|AYTI01000007.1| 78014 78232 2 + 219 Glutaredoxin-like domain protein - none -
fig|6666666.65928.peg.1689 CDS gi|559755610|gb|AYTI01000007.1| 78275 78400 2 + 126 hypothetical protein - none -
fig|6666666.65928.peg.1690 CDS gi|559755610|gb|AYTI01000007.1| 78463 78696 1 + 234 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.1691 CDS gi|559755610|gb|AYTI01000007.1| 78696 79760 3 + 1065 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.1692 CDS gi|559755610|gb|AYTI01000007.1| 79763 80653 2 + 891 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.1693 CDS gi|559755610|gb|AYTI01000007.1| 80910 82598 3 + 1689 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.1694 CDS gi|559755610|gb|AYTI01000007.1| 82646 83065 2 + 420 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.65928.peg.1695 CDS gi|559755610|gb|AYTI01000007.1| 83059 83652 1 + 594 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.65928.peg.1696 CDS gi|559755610|gb|AYTI01000007.1| 83660 84241 2 + 582 3/4-TMS conserved FUPA26-associated hypothetical protein - none -
fig|6666666.65928.peg.1697 CDS gi|559755610|gb|AYTI01000007.1| 84228 86867 3 + 2640 FUPA26 P-type ATPase - none -
fig|6666666.65928.peg.1698 CDS gi|559755610|gb|AYTI01000007.1| 86983 88047 1 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.1699 CDS gi|559755610|gb|AYTI01000007.1| 88112 89497 2 + 1386 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.1700 CDS gi|559755610|gb|AYTI01000007.1| 90310 89504 -1 - 807 putative dehydrogenase - none -
fig|6666666.65928.peg.1701 CDS gi|559755610|gb|AYTI01000007.1| 90437 91753 2 + 1317 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65928.peg.1702 CDS gi|559755610|gb|AYTI01000007.1| 91762 92370 1 + 609 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.65928.peg.1703 CDS gi|559755610|gb|AYTI01000007.1| 92373 92957 3 + 585 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65928.peg.1704 CDS gi|559755610|gb|AYTI01000007.1| 92954 93760 2 + 807 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65928.peg.1705 CDS gi|559755610|gb|AYTI01000007.1| 93837 95381 3 + 1545 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65928.peg.1706 CDS gi|559755610|gb|AYTI01000007.1| 96146 95388 -2 - 759 Methyltransferase - none -
fig|6666666.65928.peg.1707 CDS gi|559755610|gb|AYTI01000007.1| 96310 97314 1 + 1005 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65928.peg.1708 CDS gi|559755610|gb|AYTI01000007.1| 97692 97375 -3 - 318 Putative ArsR family regulatory protein - none -
fig|6666666.65928.peg.1709 CDS gi|559755610|gb|AYTI01000007.1| 98056 97766 -1 - 291 hypothetical protein - none -
fig|6666666.65928.peg.1710 CDS gi|559755610|gb|AYTI01000007.1| 98149 98475 1 + 327 FIG00544880: hypothetical protein - none -
fig|6666666.65928.peg.1711 CDS gi|559755610|gb|AYTI01000007.1| 99168 98461 -3 - 708 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65928.peg.1712 CDS gi|559755610|gb|AYTI01000007.1| 99335 99171 -2 - 165 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65928.peg.1713 CDS gi|559755610|gb|AYTI01000007.1| 100476 99349 -3 - 1128 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65928.peg.1714 CDS gi|559755610|gb|AYTI01000007.1| 101505 100537 -3 - 969 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65928.peg.1715 CDS gi|559755610|gb|AYTI01000007.1| 102051 101764 -3 - 288 FIG00546851: hypothetical protein - none -
fig|6666666.65928.peg.1716 CDS gi|559755610|gb|AYTI01000007.1| 102224 102048 -2 - 177 hypothetical protein - none -
fig|6666666.65928.peg.1717 CDS gi|559755610|gb|AYTI01000007.1| 103712 102291 -2 - 1422 Putative transport protein - none -
fig|6666666.65928.peg.1718 CDS gi|559755610|gb|AYTI01000007.1| 104200 104982 1 + 783 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65928.peg.1719 CDS gi|559755610|gb|AYTI01000007.1| 105049 106659 1 + 1611 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65928.peg.1720 CDS gi|559755610|gb|AYTI01000007.1| 106755 107111 3 + 357 FIG00543979: hypothetical protein - none -
fig|6666666.65928.peg.1721 CDS gi|559755610|gb|AYTI01000007.1| 107089 108207 1 + 1119 Glycosyltransferase - none -
fig|6666666.65928.peg.1722 CDS gi|559755610|gb|AYTI01000007.1| 108200 108898 2 + 699 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65928.peg.1723 CDS gi|559755610|gb|AYTI01000007.1| 109937 108975 -2 - 963 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.65928.peg.1724 CDS gi|559755610|gb|AYTI01000007.1| 111313 110033 -1 - 1281 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65928.peg.1725 CDS gi|559755610|gb|AYTI01000007.1| 111465 112484 3 + 1020 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.65928.peg.1726 CDS gi|559755610|gb|AYTI01000007.1| 113744 113616 -2 - 129 hypothetical protein - none -
fig|6666666.65928.peg.1727 CDS gi|559755610|gb|AYTI01000007.1| 113708 114034 2 + 327 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65928.peg.1728 CDS gi|559755610|gb|AYTI01000007.1| 114152 114982 2 + 831 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65928.peg.1729 CDS gi|559755610|gb|AYTI01000007.1| 115278 115709 3 + 432 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65928.peg.1730 CDS gi|559755610|gb|AYTI01000007.1| 115788 116495 3 + 708 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65928.peg.1731 CDS gi|559755610|gb|AYTI01000007.1| 116604 117941 3 + 1338 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.65928.peg.1732 CDS gi|559755610|gb|AYTI01000007.1| 117981 119282 3 + 1302 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.65928.peg.1733 CDS gi|559755610|gb|AYTI01000007.1| 119390 120463 2 + 1074 NADPH dehydrogenase - none -
fig|6666666.65928.peg.1734 CDS gi|559755610|gb|AYTI01000007.1| 120787 121302 1 + 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65928.peg.1735 CDS gi|559755610|gb|AYTI01000007.1| 121381 121764 1 + 384 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65928.peg.1736 CDS gi|559755610|gb|AYTI01000007.1| 122090 123043 2 + 954 FIG00548024: hypothetical protein - none -
fig|6666666.65928.peg.1737 CDS gi|559755610|gb|AYTI01000007.1| 123107 124678 2 + 1572 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65928.peg.1738 CDS gi|559755610|gb|AYTI01000007.1| 124770 125828 3 + 1059 FIG00814575: hypothetical protein - none -
fig|6666666.65928.peg.1739 CDS gi|559755610|gb|AYTI01000007.1| 125825 126625 2 + 801 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65928.peg.1740 CDS gi|559755610|gb|AYTI01000007.1| 126622 127503 1 + 882 ABC transporter component, possibly Mn transport - none -
fig|6666666.65928.peg.1741 CDS gi|559755610|gb|AYTI01000007.1| 127500 129521 3 + 2022 hypothetical protein - none -
fig|6666666.65928.peg.1742 CDS gi|559755610|gb|AYTI01000007.1| 129626 130567 2 + 942 FIG00545886: hypothetical protein - none -
fig|6666666.65928.peg.1743 CDS gi|559755610|gb|AYTI01000007.1| 130813 134295 1 + 3483 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65928.peg.1744 CDS gi|559755610|gb|AYTI01000007.1| 134401 138411 1 + 4011 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65928.peg.1745 CDS gi|559755610|gb|AYTI01000007.1| 138569 138916 2 + 348 No significant database matches - none -
fig|6666666.65928.peg.1746 CDS gi|559755610|gb|AYTI01000007.1| 139358 140785 2 + 1428 hypothetical protein - none -
fig|6666666.65928.peg.1747 CDS gi|559755610|gb|AYTI01000007.1| 140844 142229 3 + 1386 Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.1748 CDS gi|559755610|gb|AYTI01000007.1| 142244 142948 2 + 705 Hemoglobin, heme-dependent two component system response regulator ChrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.1749 CDS gi|559755610|gb|AYTI01000007.1| 144312 142969 -3 - 1344 FIG00818256: hypothetical protein - none -
fig|6666666.65928.peg.1750 CDS gi|559755610|gb|AYTI01000007.1| 144519 145571 3 + 1053 FIG00818733: hypothetical protein - none -
fig|6666666.65928.peg.1751 CDS gi|559755610|gb|AYTI01000007.1| 146721 145651 -3 - 1071 FIG00818786: hypothetical protein - none -
fig|6666666.65928.peg.1752 CDS gi|559755610|gb|AYTI01000007.1| 146996 147985 2 + 990 Putative ABC transport system ATP-binding protein - none -
fig|6666666.65928.peg.1753 CDS gi|559755610|gb|AYTI01000007.1| 148024 148785 1 + 762 Putative ABc transport system integral membrane protein - none -
fig|6666666.65928.peg.1754 CDS gi|559755610|gb|AYTI01000007.1| 148887 149612 3 + 726 hypothetical protein - none -
fig|6666666.65928.peg.1755 CDS gi|559755610|gb|AYTI01000007.1| 149609 150565 2 + 957 hypothetical protein - none -
fig|6666666.65928.peg.1756 CDS gi|559755610|gb|AYTI01000007.1| 151119 150577 -3 - 543 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.65928.peg.1757 CDS gi|559755610|gb|AYTI01000007.1| 153025 151229 -1 - 1797 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.65928.peg.1758 CDS gi|559755610|gb|AYTI01000007.1| 153296 153679 2 + 384 hypothetical protein - none -
fig|6666666.65928.peg.1759 CDS gi|559755610|gb|AYTI01000007.1| 153700 153852 1 + 153 hypothetical protein - none -
fig|6666666.65928.peg.1760 CDS gi|559755610|gb|AYTI01000007.1| 154118 154489 2 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65928.peg.1761 CDS gi|559755610|gb|AYTI01000007.1| 154493 154960 2 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65928.peg.1762 CDS gi|559755610|gb|AYTI01000007.1| 155249 157375 2 + 2127 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65928.peg.1763 CDS gi|559755610|gb|AYTI01000007.1| 157716 157603 -3 - 114 hypothetical protein - none -
fig|6666666.65928.peg.1764 CDS gi|559755610|gb|AYTI01000007.1| 157681 158871 1 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65928.peg.1765 CDS gi|559755610|gb|AYTI01000007.1| 158994 159596 3 + 603 hypothetical protein - none -
fig|6666666.65928.peg.1766 CDS gi|559755610|gb|AYTI01000007.1| 159589 160188 1 + 600 hypothetical protein - none -
fig|6666666.65928.peg.1767 CDS gi|559755610|gb|AYTI01000007.1| 160730 160185 -2 - 546 hypothetical protein - none -
fig|6666666.65928.peg.1768 CDS gi|559755610|gb|AYTI01000007.1| 161275 160730 -1 - 546 hypothetical protein - none -
fig|6666666.65928.peg.1769 CDS gi|559755610|gb|AYTI01000007.1| 161729 161268 -2 - 462 hypothetical protein - none -
fig|6666666.65928.peg.1770 CDS gi|559755610|gb|AYTI01000007.1| 161935 161729 -1 - 207 hypothetical protein - none -
fig|6666666.65928.peg.1771 CDS gi|559755610|gb|AYTI01000007.1| 162282 161935 -3 - 348 hypothetical protein - none -
fig|6666666.65928.peg.1772 CDS gi|559755610|gb|AYTI01000007.1| 162762 162295 -3 - 468 Alkaline shock protein 23 - none -
fig|6666666.65928.peg.1773 CDS gi|559755610|gb|AYTI01000007.1| 163498 163803 1 + 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.65928.peg.1774 CDS gi|559755610|gb|AYTI01000007.1| 163836 164492 3 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65928.peg.1775 CDS gi|559755610|gb|AYTI01000007.1| 164489 165142 2 + 654 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65928.peg.1776 CDS gi|559755610|gb|AYTI01000007.1| 165142 165447 1 + 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65928.peg.1777 CDS gi|559755610|gb|AYTI01000007.1| 165469 166311 1 + 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65928.peg.1778 CDS gi|559755610|gb|AYTI01000007.1| 166328 166606 2 + 279 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.65928.peg.1779 CDS gi|559755610|gb|AYTI01000007.1| 166682 166972 2 + 291 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65928.peg.1780 CDS gi|559755610|gb|AYTI01000007.1| 166972 167718 1 + 747 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.65928.peg.1781 CDS gi|559755610|gb|AYTI01000007.1| 167721 168137 3 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65928.peg.1782 CDS gi|559755610|gb|AYTI01000007.1| 168137 168367 2 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65928.peg.1783 CDS gi|559755610|gb|AYTI01000007.1| 168370 168648 1 + 279 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.65928.peg.1784 CDS gi|559755610|gb|AYTI01000007.1| 170483 168807 -2 - 1677 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65928.peg.1785 CDS gi|559755610|gb|AYTI01000007.1| 172578 170512 -3 - 2067 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65928.peg.1786 CDS gi|559755610|gb|AYTI01000007.1| 173622 172582 -3 - 1041 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65928.peg.1787 CDS gi|559755610|gb|AYTI01000007.1| 174607 173624 -1 - 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65928.peg.1788 CDS gi|559755610|gb|AYTI01000007.1| 175337 175705 2 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65928.peg.1789 CDS gi|559755610|gb|AYTI01000007.1| 175708 176022 1 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65928.peg.1790 CDS gi|559755610|gb|AYTI01000007.1| 176025 176588 3 + 564 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65928.peg.1791 CDS gi|559755610|gb|AYTI01000007.1| 177412 178635 1 + 1224 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65928.peg.1792 CDS gi|559755610|gb|AYTI01000007.1| 178845 180062 3 + 1218 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.65928.peg.1793 CDS gi|559755610|gb|AYTI01000007.1| 180274 181356 1 + 1083 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65928.peg.1794 CDS gi|559755610|gb|AYTI01000007.1| 181725 181838 3 + 114 hypothetical protein - none -
fig|6666666.65928.peg.1795 CDS gi|559755610|gb|AYTI01000007.1| 182073 181960 -3 - 114 hypothetical protein - none -
fig|6666666.65928.peg.1796 CDS gi|559755610|gb|AYTI01000007.1| 182430 182585 3 + 156 hypothetical protein - none -
fig|6666666.65928.peg.1797 CDS gi|559755610|gb|AYTI01000007.1| 182828 182715 -2 - 114 hypothetical protein - none -
fig|6666666.65928.peg.1798 CDS gi|559755610|gb|AYTI01000007.1| 183339 184571 3 + 1233 putative phosphatase - none -
fig|6666666.65928.peg.1799 CDS gi|559755610|gb|AYTI01000007.1| 184863 185261 3 + 399 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.65928.peg.1800 CDS gi|559755610|gb|AYTI01000007.1| 185277 185813 3 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65928.peg.1801 CDS gi|559755610|gb|AYTI01000007.1| 185817 186224 3 + 408 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65928.peg.1802 CDS gi|559755610|gb|AYTI01000007.1| 186265 186891 1 + 627 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.65928.peg.1803 CDS gi|559755610|gb|AYTI01000007.1| 186894 187079 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65928.peg.1804 CDS gi|559755610|gb|AYTI01000007.1| 187084 187530 1 + 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65928.peg.1805 CDS gi|559755610|gb|AYTI01000007.1| 187757 188212 2 + 456 hypothetical protein - none -
fig|6666666.65928.peg.1806 CDS gi|559755610|gb|AYTI01000007.1| 188746 189993 1 + 1248 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1807 CDS gi|559755610|gb|AYTI01000007.1| 190104 191510 3 + 1407 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1808 CDS gi|559755610|gb|AYTI01000007.1| 191507 192388 2 + 882 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1809 CDS gi|559755610|gb|AYTI01000007.1| 192556 193299 1 + 744 Putative ABC transport system membrane protein - none -
fig|6666666.65928.peg.1810 CDS gi|559755610|gb|AYTI01000007.1| 193493 194290 2 + 798 Formate-nitrate transporter - none -
fig|6666666.65928.peg.1811 CDS gi|559755610|gb|AYTI01000007.1| 195565 194318 -1 - 1248 Chromosome segregation ATPases - none -
fig|6666666.65928.peg.1812 CDS gi|559755610|gb|AYTI01000007.1| 196818 195682 -3 - 1137 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1813 CDS gi|559755610|gb|AYTI01000007.1| 197444 197301 -2 - 144 hypothetical protein - none -
fig|6666666.65928.peg.1814 CDS gi|559755610|gb|AYTI01000007.1| 197423 198745 2 + 1323 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65928.peg.1815 CDS gi|559755610|gb|AYTI01000007.1| 198745 199290 1 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65928.peg.1816 CDS gi|559755610|gb|AYTI01000007.1| 199512 200246 3 + 735 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65928.peg.1817 CDS gi|559755610|gb|AYTI01000007.1| 200631 202715 3 + 2085 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.65928.peg.1818 CDS gi|559755610|gb|AYTI01000007.1| 202916 203623 2 + 708 Putative secreted protein - none -
fig|6666666.65928.peg.1819 CDS gi|559755610|gb|AYTI01000007.1| 203961 204179 3 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65928.peg.1820 CDS gi|559755610|gb|AYTI01000007.1| 204373 204741 1 + 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.65928.peg.1821 CDS gi|559755610|gb|AYTI01000007.1| 204745 205149 1 + 405 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.65928.peg.1822 CDS gi|559755610|gb|AYTI01000007.1| 205173 205778 3 + 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.65928.peg.1823 CDS gi|559755610|gb|AYTI01000007.1| 205917 206933 3 + 1017 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65928.peg.1824 CDS gi|559755610|gb|AYTI01000007.1| 207009 207494 3 + 486 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65928.peg.1825 CDS gi|559755610|gb|AYTI01000007.1| 207664 207506 -1 - 159 hypothetical protein - none -
fig|6666666.65928.peg.1826 CDS gi|559755610|gb|AYTI01000007.1| 207694 208569 1 + 876 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.65928.peg.1827 CDS gi|559755610|gb|AYTI01000007.1| 208650 209987 3 + 1338 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65928.peg.1828 CDS gi|559755610|gb|AYTI01000007.1| 210075 210497 3 + 423 FIG00544350: hypothetical protein - none -
fig|6666666.65928.peg.1829 CDS gi|559755610|gb|AYTI01000007.1| 211738 210494 -1 - 1245 Putative subtilisin-like cell wall associated serine protease (mycosin) - none -
fig|6666666.65928.peg.1830 CDS gi|559755610|gb|AYTI01000007.1| 213105 211693 -3 - 1413 FIG00544388: hypothetical protein - none -
fig|6666666.65928.peg.1831 CDS gi|559755610|gb|AYTI01000007.1| 213256 214593 1 + 1338 FtsK/SpoIIIE family protein - none -
fig|6666666.65928.peg.1832 CDS gi|559755610|gb|AYTI01000007.1| 214644 217088 3 + 2445 FtsK/SpoIIIE family protein - none -
fig|6666666.65928.peg.1833 CDS gi|559755610|gb|AYTI01000007.1| 217098 218135 3 + 1038 FIG00543916: hypothetical protein - none -
fig|6666666.65928.peg.1834 CDS gi|559755610|gb|AYTI01000007.1| 218329 218613 1 + 285 FIG00543840: hypothetical protein - none -
fig|6666666.65928.peg.1835 CDS gi|559755610|gb|AYTI01000007.1| 218659 218940 1 + 282 FIG00544893: hypothetical protein - none -
fig|6666666.65928.peg.1836 CDS gi|559755610|gb|AYTI01000007.1| 219277 219720 1 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65928.peg.1837 CDS gi|559755610|gb|AYTI01000007.1| 219717 220250 3 + 534 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.65928.peg.1838 CDS gi|559755610|gb|AYTI01000007.1| 220509 221852 3 + 1344 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65928.peg.1839 CDS gi|559755610|gb|AYTI01000007.1| 221924 222223 2 + 300 hypothetical protein - none -
fig|6666666.65928.peg.1840 CDS gi|559755610|gb|AYTI01000007.1| 222258 223409 3 + 1152 hypothetical protein - none -
fig|6666666.65928.peg.1841 CDS gi|559755610|gb|AYTI01000007.1| 223403 223708 2 + 306 hypothetical protein - none -
fig|6666666.65928.peg.1842 CDS gi|559755610|gb|AYTI01000007.1| 224599 223757 -1 - 843 FIG00996653: hypothetical protein - none -
fig|6666666.65928.peg.1843 CDS gi|559755610|gb|AYTI01000007.1| 224754 225866 3 + 1113 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65928.peg.1844 CDS gi|559755610|gb|AYTI01000007.1| 226016 226510 2 + 495 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.65928.peg.1845 CDS gi|559755610|gb|AYTI01000007.1| 227051 228658 2 + 1608 putative transport protein - none -
fig|6666666.65928.peg.1846 CDS gi|559755610|gb|AYTI01000007.1| 228847 229323 1 + 477 hypothetical protein - none -
fig|6666666.65928.peg.1847 CDS gi|559755610|gb|AYTI01000007.1| 229442 230116 2 + 675 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.65928.peg.1848 CDS gi|559755610|gb|AYTI01000007.1| 230117 230608 2 + 492 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65928.peg.1849 CDS gi|559755610|gb|AYTI01000007.1| 230589 231665 3 + 1077 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65928.peg.1850 CDS gi|559755610|gb|AYTI01000007.1| 231827 232123 2 + 297 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65928.peg.1851 CDS gi|559755610|gb|AYTI01000007.1| 232136 233755 2 + 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65928.peg.1852 CDS gi|559755610|gb|AYTI01000007.1| 234215 234331 2 + 117 hypothetical protein - none -
fig|6666666.65928.peg.1853 CDS gi|559755610|gb|AYTI01000007.1| 234645 235031 3 + 387 putative RNA polymerase sigma factor - none -
fig|6666666.65928.peg.1854 CDS gi|559755610|gb|AYTI01000007.1| 235034 235915 2 + 882 FIG00544252: hypothetical protein - none -
fig|6666666.65928.peg.1855 CDS gi|559755610|gb|AYTI01000007.1| 236339 235947 -2 - 393 hypothetical protein - none -
fig|6666666.65928.peg.1856 CDS gi|559755610|gb|AYTI01000007.1| 236497 238017 1 + 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65928.peg.1857 CDS gi|559755610|gb|AYTI01000007.1| 238044 239186 3 + 1143 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65928.peg.1858 CDS gi|559755610|gb|AYTI01000007.1| 239295 241208 3 + 1914 hypothetical protein - none -
fig|6666666.65928.peg.1859 CDS gi|559755610|gb|AYTI01000007.1| 241276 242850 1 + 1575 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65928.peg.1860 CDS gi|559755610|gb|AYTI01000007.1| 242978 243427 2 + 450 hypothetical protein - none -
fig|6666666.65928.peg.1861 CDS gi|559755610|gb|AYTI01000007.1| 244473 243424 -3 - 1050 FIG01122572: hypothetical protein - none -
fig|6666666.65928.peg.1862 CDS gi|559755610|gb|AYTI01000007.1| 244688 245746 2 + 1059 two-component system sensor kinase - none -
fig|6666666.65928.peg.1863 CDS gi|559755610|gb|AYTI01000007.1| 245752 246429 1 + 678 putative two-component system response regulator - none -
fig|6666666.65928.peg.1864 CDS gi|559755610|gb|AYTI01000007.1| 247066 246434 -1 - 633 No significant database matches - none -
fig|6666666.65928.peg.1865 CDS gi|559755610|gb|AYTI01000007.1| 247251 248117 3 + 867 FIG00546271: hypothetical protein - none -
fig|6666666.65928.peg.1866 CDS gi|559755610|gb|AYTI01000007.1| 248896 248219 -1 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis
fig|6666666.65928.peg.1867 CDS gi|559755610|gb|AYTI01000007.1| 249915 248893 -3 - 1023 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.65928.peg.1868 CDS gi|559755610|gb|AYTI01000007.1| 250819 249962 -1 - 858 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.65928.peg.1869 CDS gi|559755610|gb|AYTI01000007.1| 251909 251043 -2 - 867 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.65928.peg.1870 CDS gi|559755610|gb|AYTI01000007.1| 252101 252235 2 + 135 hypothetical protein - none -
fig|6666666.65928.peg.1871 CDS gi|559755610|gb|AYTI01000007.1| 252382 252879 1 + 498 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65928.peg.1872 CDS gi|559755610|gb|AYTI01000007.1| 252933 254180 3 + 1248 transmembrane protein, distant homology with ydbT - none -
fig|6666666.65928.peg.1873 CDS gi|559755610|gb|AYTI01000007.1| 254240 255196 2 + 957 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.65928.peg.1874 CDS gi|559755610|gb|AYTI01000007.1| 255282 256040 3 + 759 Putative ABC transport system ATP-binding protein - none -
fig|6666666.65928.peg.1875 CDS gi|559755610|gb|AYTI01000007.1| 256033 256875 1 + 843 Putative ABC transport system membrane protein - none -
fig|6666666.65928.peg.1876 CDS gi|559755610|gb|AYTI01000007.1| 256869 257678 3 + 810 FIG00356309: hypothetical protein - none -
fig|6666666.65928.peg.1877 CDS gi|559755610|gb|AYTI01000007.1| 257636 258316 2 + 681 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.65928.peg.1878 CDS gi|559755610|gb|AYTI01000007.1| 258733 258329 -1 - 405 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65928.peg.1879 CDS gi|559755610|gb|AYTI01000007.1| 258871 259716 1 + 846 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.65928.peg.1880 CDS gi|559755610|gb|AYTI01000007.1| 259805 260035 2 + 231 FIG00546438: hypothetical protein - none -
fig|6666666.65928.peg.1881 CDS gi|559755610|gb|AYTI01000007.1| 260629 260042 -1 - 588 hypothetical protein - none -
fig|6666666.65928.peg.1882 CDS gi|559755610|gb|AYTI01000007.1| 262529 261438 -2 - 1092 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65928.peg.1883 CDS gi|559755610|gb|AYTI01000007.1| 263111 262608 -2 - 504 hypothetical membrane protein - none -
fig|6666666.65928.peg.1884 CDS gi|559755610|gb|AYTI01000007.1| 263301 265139 3 + 1839 FIG01124361: hypothetical protein - none -
fig|6666666.65928.peg.1885 CDS gi|559755610|gb|AYTI01000007.1| 265257 266312 3 + 1056 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.1886 CDS gi|559755610|gb|AYTI01000007.1| 266296 267348 1 + 1053 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.1887 CDS gi|559755610|gb|AYTI01000007.1| 267345 268187 3 + 843 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.1888 CDS gi|559755610|gb|AYTI01000007.1| 268333 269244 1 + 912 FIG00545097: hypothetical protein - none -
fig|6666666.65928.peg.1889 CDS gi|559755610|gb|AYTI01000007.1| 270646 269330 -1 - 1317 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65928.peg.1890 CDS gi|559755610|gb|AYTI01000007.1| 273040 270830 -1 - 2211 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) TCA Cycle
fig|6666666.65928.peg.1891 CDS gi|559755610|gb|AYTI01000007.1| 273089 273235 2 + 147 hypothetical protein - none -
fig|6666666.65928.peg.1892 CDS gi|559755610|gb|AYTI01000007.1| 273293 274519 2 + 1227 putative transport protein - none -
fig|6666666.65928.peg.1893 CDS gi|559755610|gb|AYTI01000007.1| 275286 274516 -3 - 771 putative transcriptional regulator (MerR family) - none -
fig|6666666.65928.peg.1894 CDS gi|559755610|gb|AYTI01000007.1| 275354 276253 2 + 900 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65928.peg.1895 CDS gi|559755610|gb|AYTI01000007.1| 276341 276520 2 + 180 hypothetical protein - none -
fig|6666666.65928.peg.1896 CDS gi|559755610|gb|AYTI01000007.1| 277190 277498 2 + 309 hypothetical protein - none -
fig|6666666.65928.peg.1897 CDS gi|559755610|gb|AYTI01000007.1| 277640 277930 2 + 291 hypothetical protein - none -
fig|6666666.65928.peg.1898 CDS gi|559755610|gb|AYTI01000007.1| 278056 279093 1 + 1038 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65928.peg.1899 CDS gi|559755610|gb|AYTI01000007.1| 279229 280314 1 + 1086 putative membrane protein - none -
fig|6666666.65928.peg.1900 CDS gi|559755610|gb|AYTI01000007.1| 281523 280348 -3 - 1176 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.1901 CDS gi|559755610|gb|AYTI01000007.1| 281597 282511 2 + 915 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.65928.peg.1902 CDS gi|559755610|gb|AYTI01000007.1| 283814 282579 -2 - 1236 FIG026501: hypothetical protein - none -
fig|6666666.65928.peg.1903 CDS gi|559755610|gb|AYTI01000007.1| 284674 283835 -1 - 840 hypothetical protein - none -
fig|6666666.65928.peg.1904 CDS gi|559755610|gb|AYTI01000007.1| 284967 284698 -3 - 270 hypothetical protein - none -
fig|6666666.65928.peg.1905 CDS gi|559755610|gb|AYTI01000007.1| 285023 285667 2 + 645 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.65928.peg.1906 CDS gi|559755610|gb|AYTI01000007.1| 285871 286308 1 + 438 Putative DNA-binding protein - none -
fig|6666666.65928.peg.1907 CDS gi|559755610|gb|AYTI01000007.1| 287944 286343 -1 - 1602 putative phospho-sugar mutase - none -
fig|6666666.65928.peg.1908 CDS gi|559755610|gb|AYTI01000007.1| 288288 289484 3 + 1197 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65928.peg.1909 CDS gi|559755610|gb|AYTI01000007.1| 289612 291033 1 + 1422 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Glycine cleavage system;
TCA Cycle
fig|6666666.65928.peg.1910 CDS gi|559755610|gb|AYTI01000007.1| 291148 291291 1 + 144 hypothetical protein - none -
fig|6666666.65928.peg.1911 CDS gi|559755610|gb|AYTI01000007.1| 291561 294986 3 + 3426 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65928.peg.1912 CDS gi|559755610|gb|AYTI01000007.1| 296521 295058 -1 - 1464 putative transport protein - none -
fig|6666666.65928.peg.1913 CDS gi|559755610|gb|AYTI01000007.1| 297038 296652 -2 - 387 FIG00547727: hypothetical protein - none -
fig|6666666.65928.peg.1914 CDS gi|559755610|gb|AYTI01000007.1| 297019 297162 1 + 144 hypothetical protein - none -
fig|6666666.65928.peg.1915 CDS gi|559755610|gb|AYTI01000007.1| 298930 297155 -1 - 1776 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65928.peg.1916 CDS gi|559755610|gb|AYTI01000007.1| 299943 299176 -3 - 768 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65928.peg.1917 CDS gi|559755610|gb|AYTI01000007.1| 300779 301849 2 + 1071 FIG00548218: hypothetical protein - none -
fig|6666666.65928.peg.1918 CDS gi|559755610|gb|AYTI01000007.1| 302129 304243 2 + 2115 O-antigen acetylase - none -
fig|6666666.65928.peg.1919 CDS gi|559755610|gb|AYTI01000007.1| 304696 304280 -1 - 417 FIG00547406: hypothetical protein - none -
fig|6666666.65928.peg.1920 CDS gi|559755610|gb|AYTI01000007.1| 305327 304701 -2 - 627 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65928.peg.1921 CDS gi|559755610|gb|AYTI01000007.1| 306248 305331 -2 - 918 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65928.peg.1922 CDS gi|559755610|gb|AYTI01000007.1| 307507 306473 -1 - 1035 transcriptional regulator - none -
fig|6666666.65928.peg.1923 CDS gi|559755610|gb|AYTI01000007.1| 307936 307688 -1 - 249 hypothetical protein - none -
fig|6666666.65928.peg.1924 CDS gi|559755610|gb|AYTI01000007.1| 309666 308035 -3 - 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.65928.peg.1925 CDS gi|559755610|gb|AYTI01000007.1| 311529 309898 -3 - 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.65928.peg.1926 CDS gi|559755610|gb|AYTI01000007.1| 311528 311671 2 + 144 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.1927 CDS gi|559755610|gb|AYTI01000007.1| 311758 312378 1 + 621 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.1928 CDS gi|559755610|gb|AYTI01000007.1| 312387 312635 3 + 249 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65928.peg.1929 CDS gi|559755610|gb|AYTI01000007.1| 312636 313106 3 + 471 FIG00545249: hypothetical protein - none -
fig|6666666.65928.peg.1930 CDS gi|559755610|gb|AYTI01000007.1| 313858 313115 -1 - 744 hypothetical protein - none -
fig|6666666.65928.peg.1931 CDS gi|559755610|gb|AYTI01000007.1| 314622 313891 -3 - 732 hypothetical protein - none -
fig|6666666.65928.peg.1932 CDS gi|559755610|gb|AYTI01000007.1| 315637 314750 -1 - 888 ABC transporter, ATP-binding protein - none -
fig|6666666.65928.peg.1933 CDS gi|559755610|gb|AYTI01000007.1| 315688 315807 1 + 120 hypothetical protein - none -
fig|6666666.65928.peg.1934 CDS gi|559755610|gb|AYTI01000007.1| 316180 317385 1 + 1206 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65928.peg.1935 CDS gi|559755610|gb|AYTI01000007.1| 317428 317928 1 + 501 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65928.peg.1936 CDS gi|559755610|gb|AYTI01000007.1| 317934 318401 3 + 468 FIG00546022: hypothetical protein - none -
fig|6666666.65928.peg.1937 CDS gi|559755610|gb|AYTI01000007.1| 318786 319871 3 + 1086 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.65928.peg.1938 CDS gi|559755610|gb|AYTI01000007.1| 319868 320878 2 + 1011 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.65928.peg.1939 CDS gi|559755610|gb|AYTI01000007.1| 320869 321645 1 + 777 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.65928.peg.1940 CDS gi|559755610|gb|AYTI01000007.1| 321866 321663 -2 - 204 hypothetical protein - none -
fig|6666666.65928.peg.1941 CDS gi|559755610|gb|AYTI01000007.1| 322742 321906 -2 - 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1942 CDS gi|559755610|gb|AYTI01000007.1| 323818 322739 -1 - 1080 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1943 CDS gi|559755610|gb|AYTI01000007.1| 325297 324005 -1 - 1293 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.1944 CDS gi|559755610|gb|AYTI01000007.1| 326101 325424 -1 - 678 FIG00996117: hypothetical protein - none -
fig|6666666.65928.peg.1945 CDS gi|559755610|gb|AYTI01000007.1| 327781 326213 -1 - 1569 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65928.peg.1946 CDS gi|559755610|gb|AYTI01000007.1| 327797 328849 2 + 1053 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65928.peg.1947 CDS gi|559755610|gb|AYTI01000007.1| 329024 330112 2 + 1089 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65928.peg.1948 CDS gi|559755610|gb|AYTI01000007.1| 330644 330943 2 + 300 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65928.peg.1949 CDS gi|559755610|gb|AYTI01000007.1| 331549 331094 -1 - 456 FIG01121108: hypothetical protein - none -
fig|6666666.65928.peg.1950 CDS gi|559755610|gb|AYTI01000007.1| 331643 332044 2 + 402 hypothetical protein - none -
fig|6666666.65928.peg.1951 CDS gi|559755610|gb|AYTI01000007.1| 332329 332147 -1 - 183 hypothetical protein - none -
fig|6666666.65928.peg.1952 CDS gi|559755610|gb|AYTI01000007.1| 332470 333549 1 + 1080 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65928.peg.1953 CDS gi|559755610|gb|AYTI01000007.1| 333723 334709 3 + 987 Putative regulator of the mannose operon, ManO Mannose Metabolism
fig|6666666.65928.peg.1954 CDS gi|559755610|gb|AYTI01000007.1| 334765 335922 1 + 1158 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65928.peg.1955 CDS gi|559755610|gb|AYTI01000007.1| 336766 335990 -1 - 777 Putative secreted protein - none -
fig|6666666.65928.peg.1956 CDS gi|559755610|gb|AYTI01000007.1| 337028 337174 2 + 147 hypothetical protein - none -
fig|6666666.65928.peg.1957 CDS gi|559755610|gb|AYTI01000007.1| 337191 337307 3 + 117 hypothetical protein - none -
fig|6666666.65928.peg.1958 CDS gi|559755610|gb|AYTI01000007.1| 337422 337775 3 + 354 FIG00544092: hypothetical protein - none -
fig|6666666.65928.peg.1959 CDS gi|559755610|gb|AYTI01000007.1| 337964 339403 2 + 1440 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis
fig|6666666.65928.peg.1960 CDS gi|559755610|gb|AYTI01000007.1| 339403 340026 1 + 624 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.65928.peg.1961 CDS gi|559755610|gb|AYTI01000007.1| 340163 340840 2 + 678 DNA-binding response regulator mtrA - none -
fig|6666666.65928.peg.1962 CDS gi|559755610|gb|AYTI01000007.1| 340870 342519 1 + 1650 Sensor histidine kinase MtrB (EC 2.7.3.-) - none -
fig|6666666.65928.peg.1963 CDS gi|559755610|gb|AYTI01000007.1| 342521 344257 2 + 1737 LpqB - none -
fig|6666666.65928.peg.1964 CDS gi|559755610|gb|AYTI01000007.1| 344329 344883 1 + 555 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.65928.peg.1965 CDS gi|559755610|gb|AYTI01000007.1| 345021 345683 3 + 663 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65928.peg.1966 CDS gi|559755610|gb|AYTI01000007.1| 345839 348382 2 + 2544 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65928.peg.1967 CDS gi|559755610|gb|AYTI01000007.1| 348827 348396 -2 - 432 hypothetical protein - none -
fig|6666666.65928.peg.1968 CDS gi|559755610|gb|AYTI01000007.1| 348984 349394 3 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.65928.peg.1969 CDS gi|559755610|gb|AYTI01000007.1| 349394 349900 2 + 507 FIG00996471: hypothetical protein - none -
fig|6666666.65928.peg.1970 CDS gi|559755610|gb|AYTI01000007.1| 350087 351145 2 + 1059 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.65928.peg.1971 CDS gi|559755610|gb|AYTI01000007.1| 351161 352435 2 + 1275 POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) - none -
fig|6666666.65928.peg.1972 CDS gi|559755610|gb|AYTI01000007.1| 353311 352445 -1 - 867 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65928.peg.1973 CDS gi|559755610|gb|AYTI01000007.1| 354735 353461 -3 - 1275 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65928.peg.1974 CDS gi|559755610|gb|AYTI01000007.1| 354765 355424 3 + 660 FIG00543821: hypothetical protein - none -
fig|6666666.65928.peg.1975 CDS gi|559755610|gb|AYTI01000007.1| 355886 355383 -2 - 504 Cys-tRNA(Pro) deacylase YbaK - none -
fig|6666666.65928.peg.1976 CDS gi|559755610|gb|AYTI01000007.1| 355934 356602 2 + 669 RNA polymerase sigma-70 factor CBSS-313593.3.peg.2729;
Transcription initiation, bacterial sigma factors
fig|6666666.65928.peg.1977 CDS gi|559755610|gb|AYTI01000007.1| 357370 357110 -1 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65928.peg.1978 CDS gi|559755610|gb|AYTI01000007.1| 358022 358411 2 + 390 FIG00543921: hypothetical protein - none -
fig|6666666.65928.peg.1979 CDS gi|559755610|gb|AYTI01000007.1| 359336 358476 -2 - 861 Putative secreted hydrolase - none -
fig|6666666.65928.peg.1980 CDS gi|559755610|gb|AYTI01000007.1| 360634 359429 -1 - 1206 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65928.peg.1981 CDS gi|559755610|gb|AYTI01000007.1| 361956 360631 -3 - 1326 putative ATP-dependent RNA helicase - none -
fig|6666666.65928.peg.1982 CDS gi|559755610|gb|AYTI01000007.1| 362251 362478 1 + 228 FIG00543928: hypothetical protein - none -
fig|6666666.65928.peg.1983 CDS gi|559755610|gb|AYTI01000007.1| 362481 363371 3 + 891 FIG01121705: hypothetical protein - none -
fig|6666666.65928.peg.1984 CDS gi|559755610|gb|AYTI01000007.1| 363426 364265 3 + 840 FIG00994019: hypothetical protein - none -
fig|6666666.65928.peg.1985 CDS gi|559755610|gb|AYTI01000007.1| 364269 367433 3 + 3165 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65928.peg.1986 CDS gi|559755610|gb|AYTI01000007.1| 367430 370654 2 + 3225 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65928.peg.1987 CDS gi|559755610|gb|AYTI01000007.1| 370691 371770 2 + 1080 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65928.peg.1988 CDS gi|559755610|gb|AYTI01000007.1| 371757 372485 3 + 729 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65928.peg.1989 CDS gi|559755610|gb|AYTI01000007.1| 372478 374529 1 + 2052 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65928.peg.1990 CDS gi|559755610|gb|AYTI01000007.1| 375414 375929 3 + 516 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65928.peg.1991 CDS gi|559755610|gb|AYTI01000007.1| 377381 375993 -2 - 1389 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65928.peg.1992 CDS gi|559755610|gb|AYTI01000007.1| 377463 378518 3 + 1056 Lon-like protease with PDZ domain - none -
fig|6666666.65928.peg.1993 CDS gi|559755610|gb|AYTI01000007.1| 379197 378523 -3 - 675 FIG00544133: hypothetical protein - none -
fig|6666666.65928.peg.1994 CDS gi|559755610|gb|AYTI01000007.1| 379745 379242 -2 - 504 FIG129854: hypothetical protein - none -
fig|6666666.65928.peg.1995 CDS gi|559755610|gb|AYTI01000007.1| 379887 382853 3 + 2967 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65928.peg.1996 CDS gi|559755610|gb|AYTI01000007.1| 383352 383723 3 + 372 DUF1696 domain-containing protein - none -
fig|6666666.65928.peg.1997 CDS gi|559755610|gb|AYTI01000007.1| 385838 384996 -2 - 843 hypothetical protein - none -
fig|6666666.65928.peg.1998 CDS gi|559755610|gb|AYTI01000007.1| 387223 385856 -1 - 1368 hypothetical protein - none -
fig|6666666.65928.peg.1999 CDS gi|559755610|gb|AYTI01000007.1| 391261 387257 -1 - 4005 non-ribosomal peptide synthetase - none -
fig|6666666.65928.peg.2000 CDS gi|559755610|gb|AYTI01000007.1| 392047 396060 1 + 4014 hypothetical protein - none -
fig|6666666.65928.peg.2001 CDS gi|559755610|gb|AYTI01000007.1| 396517 396807 1 + 291 hypothetical protein - none -
fig|6666666.65928.peg.2002 CDS gi|559755610|gb|AYTI01000007.1| 397228 398667 1 + 1440 L-asparagine permease - none -
fig|6666666.65928.peg.2003 CDS gi|559755610|gb|AYTI01000007.1| 398984 400444 2 + 1461 Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.65928.peg.2004 CDS gi|559755610|gb|AYTI01000007.1| 400460 402016 2 + 1557 Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.65928.peg.2005 CDS gi|559755610|gb|AYTI01000007.1| 402026 402289 2 + 264 Clusters with Methylmalonyl-CoA carboxyltransferase (EC 2.1.3.1) - none -
fig|6666666.65928.peg.2006 CDS gi|559755610|gb|AYTI01000007.1| 402314 402676 2 + 363 Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.65928.peg.2007 CDS gi|559755610|gb|AYTI01000007.1| 402772 403956 1 + 1185 No significant database matches - none -
fig|6666666.65928.peg.2008 CDS gi|559755610|gb|AYTI01000007.1| 404835 404029 -3 - 807 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65928.peg.2009 CDS gi|559755610|gb|AYTI01000007.1| 405764 404880 -2 - 885 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65928.peg.2010 CDS gi|559755610|gb|AYTI01000007.1| 405731 405856 2 + 126 hypothetical protein - none -
fig|6666666.65928.peg.2011 CDS gi|559755610|gb|AYTI01000007.1| 405953 407056 2 + 1104 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65928.peg.2012 CDS gi|559755610|gb|AYTI01000007.1| 407567 407094 -2 - 474 DNA topology modulation protein - none -
fig|6666666.65928.peg.2013 CDS gi|559755610|gb|AYTI01000007.1| 409243 407615 -1 - 1629 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65928.peg.2014 CDS gi|559755610|gb|AYTI01000007.1| 409540 410229 1 + 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65928.peg.2015 CDS gi|559755610|gb|AYTI01000007.1| 410251 411153 1 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65928.peg.2016 CDS gi|559755610|gb|AYTI01000007.1| 411274 411125 -1 - 150 hypothetical protein - none -
fig|6666666.65928.peg.2017 CDS gi|559755610|gb|AYTI01000007.1| 411276 411767 3 + 492 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65928.peg.2018 CDS gi|559755610|gb|AYTI01000007.1| 412727 413449 2 + 723 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.65928.peg.2019 CDS gi|559755610|gb|AYTI01000007.1| 414274 413513 -1 - 762 hypothetical protein - none -
fig|6666666.65928.peg.2020 CDS gi|559755610|gb|AYTI01000007.1| 414711 414556 -3 - 156 hypothetical protein - none -
fig|6666666.65928.peg.2021 CDS gi|559755610|gb|AYTI01000007.1| 414733 415725 1 + 993 Iron compound ABC uptake transporter substrate-binding protein PiuA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.2022 CDS gi|559755610|gb|AYTI01000007.1| 415841 416806 2 + 966 Petrobactin ABC transporter, permease protein I - none -
fig|6666666.65928.peg.2023 CDS gi|559755610|gb|AYTI01000007.1| 416799 417857 3 + 1059 Petrobactin ABC transporter, permease protein II - none -
fig|6666666.65928.peg.2024 CDS gi|559755610|gb|AYTI01000007.1| 417854 418609 2 + 756 Petrobactin ABC transporter, ATP-binding protein - none -
fig|6666666.65928.peg.2025 CDS gi|559755611|gb|AYTI01000006.1| 78 455 3 + 378 hypothetical protein - none -
fig|6666666.65928.peg.2026 CDS gi|559755611|gb|AYTI01000006.1| 458 1186 2 + 729 hypothetical protein - none -
fig|6666666.65928.peg.2027 CDS gi|559755611|gb|AYTI01000006.1| 1214 1426 2 + 213 hypothetical protein - none -
fig|6666666.65928.peg.2028 CDS gi|559755611|gb|AYTI01000006.1| 1423 1572 1 + 150 hypothetical protein - none -
fig|6666666.65928.peg.2029 CDS gi|559755611|gb|AYTI01000006.1| 1866 1750 -3 - 117 hypothetical protein - none -
fig|6666666.65928.peg.2030 CDS gi|559755611|gb|AYTI01000006.1| 1894 2094 1 + 201 hypothetical protein - none -
fig|6666666.65928.peg.2031 CDS gi|559755611|gb|AYTI01000006.1| 2506 2901 1 + 396 hypothetical protein - none -
fig|6666666.65928.peg.2032 CDS gi|559755611|gb|AYTI01000006.1| 2898 3083 3 + 186 hypothetical protein - none -
fig|6666666.65928.peg.2033 CDS gi|559755611|gb|AYTI01000006.1| 3080 3211 2 + 132 hypothetical protein - none -
fig|6666666.65928.peg.2034 CDS gi|559755611|gb|AYTI01000006.1| 3224 3655 2 + 432 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65928.peg.2035 CDS gi|559755611|gb|AYTI01000006.1| 3763 4164 1 + 402 hypothetical protein - none -
fig|6666666.65928.peg.2036 CDS gi|559755611|gb|AYTI01000006.1| 4151 4321 2 + 171 hypothetical protein - none -
fig|6666666.65928.peg.2037 CDS gi|559755611|gb|AYTI01000006.1| 4318 5235 1 + 918 hypothetical protein - none -
fig|6666666.65928.peg.2038 CDS gi|559755611|gb|AYTI01000006.1| 5232 5987 3 + 756 Phage protein - none -
fig|6666666.65928.peg.2039 CDS gi|559755611|gb|AYTI01000006.1| 6103 6357 1 + 255 hypothetical protein - none -
fig|6666666.65928.peg.2040 CDS gi|559755611|gb|AYTI01000006.1| 6674 7582 2 + 909 hypothetical protein - none -
fig|6666666.65928.peg.2041 CDS gi|559755611|gb|AYTI01000006.1| 7579 8016 1 + 438 hypothetical protein - none -
fig|6666666.65928.peg.2042 CDS gi|559755611|gb|AYTI01000006.1| 8021 8281 2 + 261 hypothetical protein - none -
fig|6666666.65928.peg.2043 CDS gi|559755611|gb|AYTI01000006.1| 8321 8821 2 + 501 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65928.peg.2044 CDS gi|559755611|gb|AYTI01000006.1| 8853 9110 3 + 258 hypothetical protein - none -
fig|6666666.65928.peg.2045 CDS gi|559755611|gb|AYTI01000006.1| 9271 9555 1 + 285 hypothetical protein - none -
fig|6666666.65928.peg.2046 CDS gi|559755611|gb|AYTI01000006.1| 9571 9729 1 + 159 hypothetical protein - none -
fig|6666666.65928.peg.2047 CDS gi|559755611|gb|AYTI01000006.1| 9729 10307 3 + 579 hypothetical protein - none -
fig|6666666.65928.peg.2048 CDS gi|559755611|gb|AYTI01000006.1| 10425 10586 3 + 162 hypothetical protein - none -
fig|6666666.65928.peg.2049 CDS gi|559755611|gb|AYTI01000006.1| 10583 11761 2 + 1179 hypothetical protein - none -
fig|6666666.65928.peg.2050 CDS gi|559755611|gb|AYTI01000006.1| 12111 12287 3 + 177 hypothetical protein - none -
fig|6666666.65928.peg.2051 CDS gi|559755611|gb|AYTI01000006.1| 12477 12977 3 + 501 hypothetical protein - none -
fig|6666666.65928.peg.2052 CDS gi|559755611|gb|AYTI01000006.1| 13341 13075 -3 - 267 hypothetical protein - none -
fig|6666666.65928.peg.2053 CDS gi|559755611|gb|AYTI01000006.1| 13647 13456 -3 - 192 hypothetical protein - none -
fig|6666666.65928.peg.2054 CDS gi|559755611|gb|AYTI01000006.1| 14150 14533 2 + 384 hypothetical protein - none -
fig|6666666.65928.peg.2055 CDS gi|559755611|gb|AYTI01000006.1| 14487 14642 3 + 156 hypothetical protein - none -
fig|6666666.65928.peg.2056 CDS gi|559755611|gb|AYTI01000006.1| 14762 16033 2 + 1272 Phage terminase, large subunit # Pham2 Phage packaging machinery
fig|6666666.65928.peg.2057 CDS gi|559755611|gb|AYTI01000006.1| 16158 17366 3 + 1209 hypothetical protein - none -
fig|6666666.65928.peg.2058 CDS gi|559755611|gb|AYTI01000006.1| 17363 18646 2 + 1284 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.65928.peg.2059 CDS gi|559755611|gb|AYTI01000006.1| 18659 19057 2 + 399 hypothetical protein - none -
fig|6666666.65928.peg.2060 CDS gi|559755611|gb|AYTI01000006.1| 19140 20066 3 + 927 Phage protein - none -
fig|6666666.65928.peg.2061 CDS gi|559755611|gb|AYTI01000006.1| 20069 20422 2 + 354 hypothetical protein - none -
fig|6666666.65928.peg.2062 CDS gi|559755611|gb|AYTI01000006.1| 20437 20865 1 + 429 hypothetical protein - none -
fig|6666666.65928.peg.2063 CDS gi|559755611|gb|AYTI01000006.1| 20865 21233 3 + 369 hypothetical protein - none -
fig|6666666.65928.peg.2064 CDS gi|559755611|gb|AYTI01000006.1| 21223 21525 1 + 303 hypothetical protein - none -
fig|6666666.65928.peg.2065 CDS gi|559755611|gb|AYTI01000006.1| 21569 21925 2 + 357 hypothetical protein - none -
fig|6666666.65928.peg.2066 CDS gi|559755611|gb|AYTI01000006.1| 21994 22998 1 + 1005 Phage tail fibers Phage tail fiber proteins
fig|6666666.65928.peg.2067 CDS gi|559755611|gb|AYTI01000006.1| 23099 23437 2 + 339 hypothetical protein - none -
fig|6666666.65928.peg.2068 CDS gi|559755611|gb|AYTI01000006.1| 23440 24153 1 + 714 hypothetical protein - none -
fig|6666666.65928.peg.2069 CDS gi|559755611|gb|AYTI01000006.1| 24153 31016 3 + 6864 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.65928.peg.2070 CDS gi|559755611|gb|AYTI01000006.1| 31017 31742 3 + 726 immunity-specific protein Beta201 - none -
fig|6666666.65928.peg.2071 CDS gi|559755611|gb|AYTI01000006.1| 31817 32788 2 + 972 immunity-specific protein Beta286 - none -
fig|6666666.65928.peg.2072 CDS gi|559755611|gb|AYTI01000006.1| 32788 34161 1 + 1374 hypothetical protein - none -
fig|6666666.65928.peg.2073 CDS gi|559755611|gb|AYTI01000006.1| 34296 35591 3 + 1296 Phage tail fiber protein Phage tail fiber proteins
fig|6666666.65928.peg.2074 CDS gi|559755611|gb|AYTI01000006.1| 35595 36716 3 + 1122 hypothetical protein - none -
fig|6666666.65928.peg.2075 CDS gi|559755611|gb|AYTI01000006.1| 36777 37547 3 + 771 hypothetical protein - none -
fig|6666666.65928.peg.2076 CDS gi|559755611|gb|AYTI01000006.1| 37547 37876 2 + 330 Putative membrane protein - none -
fig|6666666.65928.peg.2077 CDS gi|559755611|gb|AYTI01000006.1| 38034 38321 3 + 288 hypothetical protein - none -
fig|6666666.65928.peg.2078 CDS gi|559755611|gb|AYTI01000006.1| 38305 38667 1 + 363 hypothetical protein - none -
fig|6666666.65928.peg.2079 CDS gi|559755611|gb|AYTI01000006.1| 39035 38721 -2 - 315 hypothetical protein - none -
fig|6666666.65928.peg.2080 CDS gi|559755611|gb|AYTI01000006.1| 39495 39313 -3 - 183 hypothetical protein - none -
fig|6666666.65928.peg.2081 CDS gi|559755611|gb|AYTI01000006.1| 39697 39924 1 + 228 hypothetical protein - none -
fig|6666666.65928.peg.2082 CDS gi|559755611|gb|AYTI01000006.1| 40144 39902 -1 - 243 hypothetical protein - none -
fig|6666666.65928.peg.2083 CDS gi|559755611|gb|AYTI01000006.1| 40352 40137 -2 - 216 hypothetical protein - none -
fig|6666666.65928.peg.2084 CDS gi|559755611|gb|AYTI01000006.1| 41050 40451 -1 - 600 hypothetical protein - none -
fig|6666666.65928.peg.2085 CDS gi|559755612|gb|AYTI01000005.1| 169 1101 1 + 933 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.65928.peg.2086 CDS gi|559755612|gb|AYTI01000005.1| 1342 1190 -1 - 153 hypothetical protein - none -
fig|6666666.65928.peg.2087 CDS gi|559755612|gb|AYTI01000005.1| 1477 4332 1 + 2856 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65928.peg.2088 CDS gi|559755612|gb|AYTI01000005.1| 4429 5562 1 + 1134 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65928.peg.2089 CDS gi|559755612|gb|AYTI01000005.1| 5627 6013 2 + 387 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65928.peg.2090 CDS gi|559755612|gb|AYTI01000005.1| 6561 6100 -3 - 462 hypothetical protein - none -
fig|6666666.65928.peg.2091 CDS gi|559755612|gb|AYTI01000005.1| 6658 7428 1 + 771 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65928.peg.2092 CDS gi|559755612|gb|AYTI01000005.1| 7553 8572 2 + 1020 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65928.peg.2093 CDS gi|559755612|gb|AYTI01000005.1| 9624 8740 -3 - 885 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65928.peg.2094 CDS gi|559755612|gb|AYTI01000005.1| 10724 9633 -2 - 1092 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.65928.peg.2095 CDS gi|559755612|gb|AYTI01000005.1| 11707 10721 -1 - 987 hypothetical protein - none -
fig|6666666.65928.peg.2096 CDS gi|559755612|gb|AYTI01000005.1| 12747 11764 -3 - 984 putative iron ABC transport system, solute-binding protein - none -
fig|6666666.65928.peg.2097 CDS gi|559755612|gb|AYTI01000005.1| 12922 13836 1 + 915 Siderophore-interacting protein - none -
fig|6666666.65928.peg.2098 CDS gi|559755612|gb|AYTI01000005.1| 14008 14778 1 + 771 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65928.peg.2099 CDS gi|559755612|gb|AYTI01000005.1| 15327 14854 -3 - 474 FIG00543905: hypothetical protein - none -
fig|6666666.65928.peg.2100 CDS gi|559755612|gb|AYTI01000005.1| 15531 16967 3 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.2101 CDS gi|559755612|gb|AYTI01000005.1| 17195 18190 2 + 996 hypothetical protein - none -
fig|6666666.65928.peg.2102 CDS gi|559755612|gb|AYTI01000005.1| 18419 19237 2 + 819 Mobile element protein - none -
fig|6666666.65928.peg.2103 CDS gi|559755612|gb|AYTI01000005.1| 19302 20618 3 + 1317 Membrane protein - none -
fig|6666666.65928.peg.2104 CDS gi|559755612|gb|AYTI01000005.1| 22117 20684 -1 - 1434 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65928.peg.2105 CDS gi|559755612|gb|AYTI01000005.1| 22602 22393 -3 - 210 hypothetical protein - none -
fig|6666666.65928.peg.2106 CDS gi|559755612|gb|AYTI01000005.1| 22665 22853 3 + 189 hypothetical protein - none -
fig|6666666.65928.peg.2107 CDS gi|559755612|gb|AYTI01000005.1| 24350 22980 -2 - 1371 Histidine permease YuiF - none -
fig|6666666.65928.peg.2108 CDS gi|559755612|gb|AYTI01000005.1| 25222 24686 -1 - 537 FIG00547029: hypothetical protein - none -
fig|6666666.65928.peg.2109 CDS gi|559755612|gb|AYTI01000005.1| 25409 25269 -2 - 141 hypothetical protein - none -
fig|6666666.65928.peg.2110 CDS gi|559755612|gb|AYTI01000005.1| 27192 25624 -3 - 1569 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65928.peg.2111 CDS gi|559755612|gb|AYTI01000005.1| 27352 28077 1 + 726 putative secreted protein - none -
fig|6666666.65928.peg.2112 CDS gi|559755612|gb|AYTI01000005.1| 28087 29376 1 + 1290 FIG00545265: hypothetical protein - none -
fig|6666666.65928.peg.2113 CDS gi|559755612|gb|AYTI01000005.1| 29672 29412 -2 - 261 hypothetical protein - none -
fig|6666666.65928.peg.2114 CDS gi|559755612|gb|AYTI01000005.1| 30404 29766 -2 - 639 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.2115 CDS gi|559755612|gb|AYTI01000005.1| 33700 30554 -1 - 3147 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) CBSS-316057.3.peg.3521
fig|6666666.65928.peg.2116 CDS gi|559755612|gb|AYTI01000005.1| 35135 33786 -2 - 1350 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.2117 CDS gi|559755612|gb|AYTI01000005.1| 35295 36239 3 + 945 hypothetical protein - none -
fig|6666666.65928.peg.2118 CDS gi|559755612|gb|AYTI01000005.1| 36325 37980 1 + 1656 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65928.peg.2119 CDS gi|559755613|gb|AYTI01000004.1| 1084 1200 1 + 117 hypothetical protein - none -
fig|6666666.65928.peg.2120 CDS gi|559755613|gb|AYTI01000004.1| 4969 1370 -1 - 3600 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.65928.peg.2121 CDS gi|559755613|gb|AYTI01000004.1| 8306 5187 -2 - 3120 Chromosome partition protein smc - none -
fig|6666666.65928.peg.2122 CDS gi|559755613|gb|AYTI01000004.1| 8299 8736 1 + 438 hypothetical protein - none -
fig|6666666.65928.peg.2123 CDS gi|559755613|gb|AYTI01000004.1| 9050 8733 -2 - 318 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65928.peg.2124 CDS gi|559755613|gb|AYTI01000004.1| 10678 9221 -1 - 1458 amino acid carrier protein - none -
fig|6666666.65928.peg.2125 CDS gi|559755613|gb|AYTI01000004.1| 11816 10959 -2 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65928.peg.2126 CDS gi|559755613|gb|AYTI01000004.1| 12589 11840 -1 - 750 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65928.peg.2127 CDS gi|559755613|gb|AYTI01000004.1| 13113 12586 -3 - 528 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65928.peg.2128 CDS gi|559755613|gb|AYTI01000004.1| 13910 13176 -2 - 735 Cell division initiation protein - none -
fig|6666666.65928.peg.2129 CDS gi|559755613|gb|AYTI01000004.1| 14305 14871 1 + 567 Bifunctional deaminase-reductase domain protein - none -
fig|6666666.65928.peg.2130 CDS gi|559755613|gb|AYTI01000004.1| 16030 14918 -1 - 1113 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.65928.peg.2131 CDS gi|559755613|gb|AYTI01000004.1| 17600 16254 -2 - 1347 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65928.peg.2132 CDS gi|559755613|gb|AYTI01000004.1| 18096 17962 -3 - 135 hypothetical protein - none -
fig|6666666.65928.peg.2133 CDS gi|559755613|gb|AYTI01000004.1| 18116 19306 2 + 1191 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.65928.peg.2134 CDS gi|559755613|gb|AYTI01000004.1| 19707 19276 -3 - 432 hypothetical protein - none -
fig|6666666.65928.peg.2135 CDS gi|559755613|gb|AYTI01000004.1| 19751 21076 2 + 1326 No significant database matches - none -
fig|6666666.65928.peg.2136 CDS gi|559755613|gb|AYTI01000004.1| 21203 22453 2 + 1251 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65928.peg.2137 CDS gi|559755613|gb|AYTI01000004.1| 22523 22636 2 + 114 hypothetical protein - none -
fig|6666666.65928.peg.2138 CDS gi|559755613|gb|AYTI01000004.1| 23283 25691 3 + 2409 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.2139 CDS gi|559755613|gb|AYTI01000004.1| 25926 26501 3 + 576 Putative secreted protein - none -
fig|6666666.65928.peg.2140 CDS gi|559755613|gb|AYTI01000004.1| 27840 26572 -3 - 1269 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65928.peg.2141 CDS gi|559755613|gb|AYTI01000004.1| 29085 28234 -3 - 852 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65928.peg.2142 CDS gi|559755613|gb|AYTI01000004.1| 30051 29242 -3 - 810 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65928.peg.2143 CDS gi|559755613|gb|AYTI01000004.1| 30828 30187 -3 - 642 FIG00997095: hypothetical protein - none -
fig|6666666.65928.peg.2144 CDS gi|559755613|gb|AYTI01000004.1| 31245 30889 -3 - 357 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65928.peg.2145 CDS gi|559755613|gb|AYTI01000004.1| 32119 31325 -1 - 795 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.65928.peg.2146 CDS gi|559755613|gb|AYTI01000004.1| 33037 32255 -1 - 783 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65928.peg.2147 CDS gi|559755613|gb|AYTI01000004.1| 33762 33034 -3 - 729 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.65928.peg.2148 CDS gi|559755613|gb|AYTI01000004.1| 34511 33879 -2 - 633 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.65928.peg.2149 CDS gi|559755613|gb|AYTI01000004.1| 35918 34533 -2 - 1386 putative transport protein - none -
fig|6666666.65928.peg.2150 CDS gi|559755613|gb|AYTI01000004.1| 36338 36150 -2 - 189 hypothetical protein - none -
fig|6666666.65928.peg.2151 CDS gi|559755613|gb|AYTI01000004.1| 36964 36356 -1 - 609 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.65928.peg.2152 CDS gi|559755613|gb|AYTI01000004.1| 38205 37090 -3 - 1116 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.65928.peg.2153 CDS gi|559755613|gb|AYTI01000004.1| 39602 38283 -2 - 1320 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.65928.peg.2154 CDS gi|559755613|gb|AYTI01000004.1| 39699 39556 -3 - 144 hypothetical protein - none -
fig|6666666.65928.peg.2155 CDS gi|559755613|gb|AYTI01000004.1| 39992 40996 2 + 1005 hypothetical protein - none -
fig|6666666.65928.peg.2156 CDS gi|559755613|gb|AYTI01000004.1| 41692 41012 -1 - 681 hypothetical protein - none -
fig|6666666.65928.peg.2157 CDS gi|559755613|gb|AYTI01000004.1| 42463 41804 -1 - 660 FIG00545144: hypothetical protein - none -
fig|6666666.65928.peg.2158 CDS gi|559755613|gb|AYTI01000004.1| 42852 43469 3 + 618 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.65928.peg.2159 CDS gi|559755613|gb|AYTI01000004.1| 43480 45693 1 + 2214 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65928.peg.2160 CDS gi|559755613|gb|AYTI01000004.1| 45997 47355 1 + 1359 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.65928.peg.2161 CDS gi|559755613|gb|AYTI01000004.1| 47743 48138 1 + 396 hypothetical protein - none -
fig|6666666.65928.peg.2162 CDS gi|559755613|gb|AYTI01000004.1| 48282 49325 3 + 1044 FIG00544169: hypothetical protein - none -
fig|6666666.65928.peg.2163 CDS gi|559755613|gb|AYTI01000004.1| 49411 49536 1 + 126 hypothetical protein - none -
fig|6666666.65928.peg.2164 CDS gi|559755613|gb|AYTI01000004.1| 49977 49603 -3 - 375 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65928.peg.2165 CDS gi|559755613|gb|AYTI01000004.1| 50254 50021 -1 - 234 FIG00544856: hypothetical protein - none -
fig|6666666.65928.peg.2166 CDS gi|559755613|gb|AYTI01000004.1| 50927 50292 -2 - 636 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.65928.peg.2167 CDS gi|559755613|gb|AYTI01000004.1| 52292 50988 -2 - 1305 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65928.peg.2168 CDS gi|559755613|gb|AYTI01000004.1| 54907 52397 -1 - 2511 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65928.peg.2169 CDS gi|559755613|gb|AYTI01000004.1| 55956 54904 -3 - 1053 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65928.peg.2170 CDS gi|559755613|gb|AYTI01000004.1| 56152 57036 1 + 885 Protein rarD - none -
fig|6666666.65928.peg.2171 CDS gi|559755613|gb|AYTI01000004.1| 57563 57033 -2 - 531 FIG00544566: hypothetical protein - none -
fig|6666666.65928.peg.2172 CDS gi|559755613|gb|AYTI01000004.1| 58568 57645 -2 - 924 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65928.peg.2173 CDS gi|559755613|gb|AYTI01000004.1| 59169 58561 -3 - 609 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65928.peg.2174 CDS gi|559755613|gb|AYTI01000004.1| 59190 60188 3 + 999 FIG00994935: hypothetical protein - none -
fig|6666666.65928.peg.2175 CDS gi|559755613|gb|AYTI01000004.1| 60881 60279 -2 - 603 Putative secreted protein - none -
fig|6666666.65928.peg.2176 CDS gi|559755613|gb|AYTI01000004.1| 61270 62211 1 + 942 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65928.peg.2177 CDS gi|559755613|gb|AYTI01000004.1| 63500 62208 -2 - 1293 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65928.peg.2178 CDS gi|559755613|gb|AYTI01000004.1| 65585 63738 -2 - 1848 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65928.peg.2179 CDS gi|559755613|gb|AYTI01000004.1| 66898 65576 -1 - 1323 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65928.peg.2180 CDS gi|559755613|gb|AYTI01000004.1| 67462 67274 -1 - 189 hypothetical protein - none -
fig|6666666.65928.peg.2181 CDS gi|559755613|gb|AYTI01000004.1| 68236 67562 -1 - 675 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria - none -
fig|6666666.65928.peg.2182 CDS gi|559755613|gb|AYTI01000004.1| 68577 68275 -3 - 303 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria - none -
fig|6666666.65928.peg.2183 CDS gi|559755613|gb|AYTI01000004.1| 69180 68884 -3 - 297 hypothetical protein - none -
fig|6666666.65928.peg.2184 CDS gi|559755613|gb|AYTI01000004.1| 69892 69443 -1 - 450 FIG021292: hypothetical protein - none -
fig|6666666.65928.peg.2185 CDS gi|559755613|gb|AYTI01000004.1| 70787 70068 -2 - 720 COG1496: Uncharacterized conserved protein - none -
fig|6666666.65928.peg.2186 CDS gi|559755613|gb|AYTI01000004.1| 72061 70790 -1 - 1272 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65928.peg.2187 CDS gi|559755613|gb|AYTI01000004.1| 72991 72335 -1 - 657 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65928.peg.2188 CDS gi|559755613|gb|AYTI01000004.1| 74464 73007 -1 - 1458 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65928.peg.2189 CDS gi|559755613|gb|AYTI01000004.1| 75674 74589 -2 - 1086 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65928.peg.2190 CDS gi|559755613|gb|AYTI01000004.1| 77308 75674 -1 - 1635 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65928.peg.2191 CDS gi|559755613|gb|AYTI01000004.1| 78746 77361 -2 - 1386 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65928.peg.2192 CDS gi|559755613|gb|AYTI01000004.1| 79850 78750 -2 - 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65928.peg.2193 CDS gi|559755613|gb|AYTI01000004.1| 81404 79854 -2 - 1551 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65928.peg.2194 CDS gi|559755613|gb|AYTI01000004.1| 82999 81488 -1 - 1512 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65928.peg.2195 CDS gi|559755613|gb|AYTI01000004.1| 85117 83090 -1 - 2028 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.2196 CDS gi|559755613|gb|AYTI01000004.1| 85858 85151 -1 - 708 hypothetical protein - none -
fig|6666666.65928.peg.2197 CDS gi|559755613|gb|AYTI01000004.1| 86914 85874 -1 - 1041 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65928.peg.2198 CDS gi|559755613|gb|AYTI01000004.1| 87529 87098 -1 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65928.peg.2199 CDS gi|559755613|gb|AYTI01000004.1| 88019 87876 -2 - 144 hypothetical protein - none -
fig|6666666.65928.peg.2200 CDS gi|559755613|gb|AYTI01000004.1| 88442 88047 -2 - 396 FIG017342: transmembrane protein - none -
fig|6666666.65928.peg.2201 CDS gi|559755613|gb|AYTI01000004.1| 89001 88579 -3 - 423 hypothetical protein - none -
fig|6666666.65928.peg.2202 CDS gi|559755613|gb|AYTI01000004.1| 89330 89800 2 + 471 hypothetical protein - none -
fig|6666666.65928.peg.2203 CDS gi|559755613|gb|AYTI01000004.1| 90780 89797 -3 - 984 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.65928.peg.2204 CDS gi|559755613|gb|AYTI01000004.1| 91012 92130 1 + 1119 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.65928.peg.2205 CDS gi|559755613|gb|AYTI01000004.1| 92137 93621 1 + 1485 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65928.peg.2206 CDS gi|559755613|gb|AYTI01000004.1| 93971 93618 -2 - 354 Conserved hypothetical regulatory protein - none -
fig|6666666.65928.peg.2207 CDS gi|559755613|gb|AYTI01000004.1| 94077 96356 3 + 2280 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65928.peg.2208 CDS gi|559755613|gb|AYTI01000004.1| 97854 96466 -3 - 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65928.peg.2209 CDS gi|559755613|gb|AYTI01000004.1| 98484 97981 -3 - 504 FIG00994909: hypothetical protein - none -
fig|6666666.65928.peg.2210 CDS gi|559755613|gb|AYTI01000004.1| 99948 98626 -3 - 1323 hypothetical membrane protein - none -
fig|6666666.65928.peg.2211 CDS gi|559755613|gb|AYTI01000004.1| 100904 100263 -2 - 642 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.2212 CDS gi|559755613|gb|AYTI01000004.1| 101892 100939 -3 - 954 ROK family protein (putative glucokinase) - none -
fig|6666666.65928.peg.2213 CDS gi|559755613|gb|AYTI01000004.1| 103146 102016 -3 - 1131 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65928.peg.2214 CDS gi|559755613|gb|AYTI01000004.1| 104251 103229 -1 - 1023 NLP/P60 family protein - none -
fig|6666666.65928.peg.2215 CDS gi|559755613|gb|AYTI01000004.1| 105066 104404 -3 - 663 putative secreted protein - none -
fig|6666666.65928.peg.2216 CDS gi|559755613|gb|AYTI01000004.1| 107419 105797 -1 - 1623 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65928.peg.2217 CDS gi|559755613|gb|AYTI01000004.1| 108654 107416 -3 - 1239 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65928.peg.2218 CDS gi|559755613|gb|AYTI01000004.1| 109529 108633 -2 - 897 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65928.peg.2219 CDS gi|559755613|gb|AYTI01000004.1| 110208 109618 -3 - 591 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65928.peg.2220 CDS gi|559755613|gb|AYTI01000004.1| 111235 110804 -1 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.65928.peg.2221 CDS gi|559755613|gb|AYTI01000004.1| 112342 111257 -1 - 1086 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65928.peg.2222 CDS gi|559755613|gb|AYTI01000004.1| 112856 114778 2 + 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65928.peg.2223 CDS gi|559755613|gb|AYTI01000004.1| 115359 115012 -3 - 348 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65928.peg.2224 CDS gi|559755613|gb|AYTI01000004.1| 115828 116559 1 + 732 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65928.peg.2225 CDS gi|559755613|gb|AYTI01000004.1| 116564 117118 2 + 555 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis
fig|6666666.65928.peg.2226 CDS gi|559755613|gb|AYTI01000004.1| 117166 118230 1 + 1065 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis
fig|6666666.65928.peg.2227 CDS gi|559755613|gb|AYTI01000004.1| 118327 119148 1 + 822 Cobalamin synthase - none -
fig|6666666.65928.peg.2228 CDS gi|559755613|gb|AYTI01000004.1| 120356 119256 -2 - 1101 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65928.peg.2229 CDS gi|559755613|gb|AYTI01000004.1| 120465 121982 3 + 1518 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65928.peg.2230 CDS gi|559755613|gb|AYTI01000004.1| 122368 122093 -1 - 276 Putative oxidoreductase - none -
fig|6666666.65928.peg.2231 CDS gi|559755614|gb|AYTI01000003.1| 1490 30 -2 - 1461 hypothetical protein - none -
fig|6666666.65928.peg.2232 CDS gi|559755614|gb|AYTI01000003.1| 2048 1914 -2 - 135 hypothetical protein - none -
fig|6666666.65928.peg.2233 CDS gi|559755614|gb|AYTI01000003.1| 2047 3000 1 + 954 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65928.peg.2234 CDS gi|559755614|gb|AYTI01000003.1| 2997 3269 3 + 273 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65928.peg.2235 CDS gi|559755614|gb|AYTI01000003.1| 3953 3279 -2 - 675 FIG00820636: hypothetical protein - none -
fig|6666666.65928.peg.2236 CDS gi|559755614|gb|AYTI01000003.1| 4686 4057 -3 - 630 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.65928.peg.2237 CDS gi|559755614|gb|AYTI01000003.1| 4765 5652 1 + 888 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65928.peg.2238 CDS gi|559755614|gb|AYTI01000003.1| 6963 5656 -3 - 1308 FIG00545264: hypothetical protein - none -
fig|6666666.65928.peg.2239 CDS gi|559755614|gb|AYTI01000003.1| 7151 6981 -2 - 171 FIG00543978: hypothetical protein - none -
fig|6666666.65928.peg.2240 CDS gi|559755614|gb|AYTI01000003.1| 9811 7154 -1 - 2658 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65928.peg.2241 CDS gi|559755614|gb|AYTI01000003.1| 10044 10685 3 + 642 hypothetical protein - none -
fig|6666666.65928.peg.2242 CDS gi|559755614|gb|AYTI01000003.1| 12157 10754 -1 - 1404 FIG00545175: hypothetical protein - none -
fig|6666666.65928.peg.2243 CDS gi|559755614|gb|AYTI01000003.1| 13186 12194 -1 - 993 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65928.peg.2244 CDS gi|559755614|gb|AYTI01000003.1| 13424 14182 2 + 759 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative Triacylglycerol metabolism;
Triacylglycerol metabolism
fig|6666666.65928.peg.2245 CDS gi|559755614|gb|AYTI01000003.1| 14796 14969 3 + 174 hypothetical protein - none -
fig|6666666.65928.peg.2246 CDS gi|559755614|gb|AYTI01000003.1| 15488 15342 -2 - 147 hypothetical protein - none -
fig|6666666.65928.peg.2247 CDS gi|559755614|gb|AYTI01000003.1| 16642 15626 -1 - 1017 TolA protein Ton and Tol transport systems
fig|6666666.65928.peg.2248 CDS gi|559755614|gb|AYTI01000003.1| 17123 17007 -2 - 117 hypothetical protein - none -
fig|6666666.65928.peg.2249 CDS gi|559755614|gb|AYTI01000003.1| 17365 17213 -1 - 153 hypothetical protein - none -
fig|6666666.65928.peg.2250 CDS gi|559755614|gb|AYTI01000003.1| 17645 17370 -2 - 276 hypothetical protein - none -
fig|6666666.65928.peg.2251 CDS gi|559755614|gb|AYTI01000003.1| 18835 17996 -1 - 840 secretory serine protease - none -
fig|6666666.65928.peg.2252 CDS gi|559755614|gb|AYTI01000003.1| 20428 18872 -1 - 1557 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65928.peg.2253 CDS gi|559755614|gb|AYTI01000003.1| 20542 21486 1 + 945 Membrane protease family protein BA0301 - none -
fig|6666666.65928.peg.2254 CDS gi|559755614|gb|AYTI01000003.1| 21526 21699 1 + 174 hypothetical protein - none -
fig|6666666.65928.peg.2255 CDS gi|559755614|gb|AYTI01000003.1| 21844 23133 1 + 1290 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65928.peg.2256 CDS gi|559755614|gb|AYTI01000003.1| 24635 23130 -2 - 1506 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.2257 CDS gi|559755614|gb|AYTI01000003.1| 26792 24645 -2 - 2148 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.2258 CDS gi|559755614|gb|AYTI01000003.1| 27000 28748 3 + 1749 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.2259 CDS gi|559755614|gb|AYTI01000003.1| 29394 28726 -3 - 669 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65928.peg.2260 CDS gi|559755614|gb|AYTI01000003.1| 29788 29402 -1 - 387 hypothetical protein - none -
fig|6666666.65928.peg.2261 CDS gi|559755614|gb|AYTI01000003.1| 30324 29785 -3 - 540 Putative membrane protein - none -
fig|6666666.65928.peg.2262 CDS gi|559755614|gb|AYTI01000003.1| 30757 30311 -1 - 447 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65928.peg.2263 CDS gi|559755614|gb|AYTI01000003.1| 31209 30754 -3 - 456 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65928.peg.2264 CDS gi|559755614|gb|AYTI01000003.1| 31552 31211 -1 - 342 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65928.peg.2265 CDS gi|559755614|gb|AYTI01000003.1| 32321 31539 -2 - 783 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65928.peg.2266 CDS gi|559755614|gb|AYTI01000003.1| 32916 32323 -3 - 594 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65928.peg.2267 CDS gi|559755614|gb|AYTI01000003.1| 34885 32879 -1 - 2007 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65928.peg.2268 CDS gi|559755614|gb|AYTI01000003.1| 35463 34882 -3 - 582 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65928.peg.2269 CDS gi|559755614|gb|AYTI01000003.1| 36309 35467 -3 - 843 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65928.peg.2270 CDS gi|559755614|gb|AYTI01000003.1| 37524 36340 -3 - 1185 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65928.peg.2271 CDS gi|559755614|gb|AYTI01000003.1| 37574 38050 2 + 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65928.peg.2272 CDS gi|559755614|gb|AYTI01000003.1| 38052 38336 3 + 285 rhodanese-related sulfurtransferase - none -
fig|6666666.65928.peg.2273 CDS gi|559755614|gb|AYTI01000003.1| 39815 38373 -2 - 1443 putative sodium:dicarboxylate symporter - none -
fig|6666666.65928.peg.2274 CDS gi|559755614|gb|AYTI01000003.1| 40156 41403 1 + 1248 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65928.peg.2275 CDS gi|559755614|gb|AYTI01000003.1| 41425 41865 1 + 441 Transcriptional regulator, MarR family - none -
fig|6666666.65928.peg.2276 CDS gi|559755614|gb|AYTI01000003.1| 41866 45696 1 + 3831 putative non-ribosomal peptide synthetase - none -
fig|6666666.65928.peg.2277 CDS gi|559755614|gb|AYTI01000003.1| 46130 46297 2 + 168 hypothetical protein - none -
fig|6666666.65928.peg.2278 CDS gi|559755614|gb|AYTI01000003.1| 47676 46771 -3 - 906 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65928.peg.2279 CDS gi|559755614|gb|AYTI01000003.1| 48048 47866 -3 - 183 hypothetical protein - none -
fig|6666666.65928.peg.2280 CDS gi|559755614|gb|AYTI01000003.1| 48249 48100 -3 - 150 hypothetical protein - none -
fig|6666666.65928.peg.2281 CDS gi|559755614|gb|AYTI01000003.1| 49114 48989 -1 - 126 hypothetical protein - none -
fig|6666666.65928.peg.2282 CDS gi|559755614|gb|AYTI01000003.1| 49356 49168 -3 - 189 hypothetical protein - none -
fig|6666666.65928.peg.2283 CDS gi|559755614|gb|AYTI01000003.1| 51402 49762 -3 - 1641 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65928.peg.2284 CDS gi|559755614|gb|AYTI01000003.1| 51581 52960 2 + 1380 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65928.peg.2285 CDS gi|559755614|gb|AYTI01000003.1| 53156 53299 2 + 144 hypothetical protein - none -
fig|6666666.65928.peg.2286 CDS gi|559755614|gb|AYTI01000003.1| 53397 53945 3 + 549 Acetyl-CoA acetyltransferase - none -
fig|6666666.65928.peg.2287 CDS gi|559755614|gb|AYTI01000003.1| 57578 54018 -2 - 3561 hypothetical protein - none -
fig|6666666.65928.peg.2288 CDS gi|559755614|gb|AYTI01000003.1| 58016 60874 2 + 2859 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65928.peg.2289 CDS gi|559755614|gb|AYTI01000003.1| 60875 61369 2 + 495 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65928.peg.2290 CDS gi|559755614|gb|AYTI01000003.1| 61366 63036 1 + 1671 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65928.peg.2291 CDS gi|559755614|gb|AYTI01000003.1| 63033 63548 3 + 516 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65928.peg.2292 CDS gi|559755614|gb|AYTI01000003.1| 63545 63817 2 + 273 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65928.peg.2293 CDS gi|559755614|gb|AYTI01000003.1| 63817 64170 1 + 354 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65928.peg.2294 CDS gi|559755614|gb|AYTI01000003.1| 64481 64275 -2 - 207 hypothetical protein - none -
fig|6666666.65928.peg.2295 CDS gi|559755614|gb|AYTI01000003.1| 66535 65417 -1 - 1119 Putative cytoplasmic protein - none -
fig|6666666.65928.peg.2296 CDS gi|559755614|gb|AYTI01000003.1| 67097 66555 -2 - 543 FIG00544658: hypothetical protein - none -
fig|6666666.65928.peg.2297 CDS gi|559755614|gb|AYTI01000003.1| 67368 67108 -3 - 261 hypothetical protein - none -
fig|6666666.65928.peg.2298 CDS gi|559755614|gb|AYTI01000003.1| 67385 67978 2 + 594 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65928.peg.2299 CDS gi|559755614|gb|AYTI01000003.1| 67985 68947 2 + 963 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65928.peg.2300 CDS gi|559755614|gb|AYTI01000003.1| 69002 69718 2 + 717 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65928.peg.2301 CDS gi|559755614|gb|AYTI01000003.1| 69715 71208 1 + 1494 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.2302 CDS gi|559755614|gb|AYTI01000003.1| 71977 71216 -1 - 762 Putative ABC transport system membrane protein - none -
fig|6666666.65928.peg.2303 CDS gi|559755614|gb|AYTI01000003.1| 72907 71978 -1 - 930 putative ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.2304 CDS gi|559755614|gb|AYTI01000003.1| 73400 72921 -2 - 480 mutT3 - none -
fig|6666666.65928.peg.2305 CDS gi|559755614|gb|AYTI01000003.1| 73489 74676 1 + 1188 FIG00543876: hypothetical protein - none -
fig|6666666.65928.peg.2306 CDS gi|559755614|gb|AYTI01000003.1| 74730 74903 3 + 174 FIG00543876: hypothetical protein - none -
fig|6666666.65928.peg.2307 CDS gi|559755614|gb|AYTI01000003.1| 75133 75858 1 + 726 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.65928.peg.2308 CDS gi|559755614|gb|AYTI01000003.1| 75855 78101 3 + 2247 serine/threonine protein kinase - none -
fig|6666666.65928.peg.2309 CDS gi|559755614|gb|AYTI01000003.1| 79300 78098 -1 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65928.peg.2310 CDS gi|559755614|gb|AYTI01000003.1| 80692 79304 -1 - 1389 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65928.peg.2311 CDS gi|559755614|gb|AYTI01000003.1| 80942 82294 2 + 1353 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) - none -
fig|6666666.65928.peg.2312 CDS gi|559755614|gb|AYTI01000003.1| 82278 82766 3 + 489 FIG00544625: hypothetical protein - none -
fig|6666666.65928.peg.2313 CDS gi|559755614|gb|AYTI01000003.1| 83065 84048 1 + 984 No significant database matches - none -
fig|6666666.65928.peg.2314 CDS gi|559755614|gb|AYTI01000003.1| 85107 85610 3 + 504 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.65928.peg.2315 CDS gi|559755614|gb|AYTI01000003.1| 86460 85648 -3 - 813 hypothetical protein - none -
fig|6666666.65928.peg.2316 CDS gi|559755614|gb|AYTI01000003.1| 87137 86436 -2 - 702 hypothetical protein - none -
fig|6666666.65928.peg.2317 CDS gi|559755614|gb|AYTI01000003.1| 87305 87138 -2 - 168 hypothetical protein - none -
fig|6666666.65928.peg.2318 CDS gi|559755614|gb|AYTI01000003.1| 88313 87423 -2 - 891 putative integral membrane protein - none -
fig|6666666.65928.peg.2319 CDS gi|559755614|gb|AYTI01000003.1| 88891 88310 -1 - 582 hypothetical protein - none -
fig|6666666.65928.peg.2320 CDS gi|559755614|gb|AYTI01000003.1| 89163 89468 3 + 306 hypothetical protein - none -
fig|6666666.65928.peg.2321 CDS gi|559755614|gb|AYTI01000003.1| 89468 89725 2 + 258 hypothetical protein - none -
fig|6666666.65928.peg.2322 CDS gi|559755614|gb|AYTI01000003.1| 89751 90002 3 + 252 hypothetical protein - none -
fig|6666666.65928.peg.2323 CDS gi|559755614|gb|AYTI01000003.1| 90567 90046 -3 - 522 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.65928.peg.2324 CDS gi|559755614|gb|AYTI01000003.1| 91389 90580 -3 - 810 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65928.peg.2325 CDS gi|559755614|gb|AYTI01000003.1| 92782 91382 -1 - 1401 ResB-like protein - none -
fig|6666666.65928.peg.2326 CDS gi|559755614|gb|AYTI01000003.1| 93520 92792 -1 - 729 hypothetical protein - none -
fig|6666666.65928.peg.2327 CDS gi|559755614|gb|AYTI01000003.1| 94961 93510 -2 - 1452 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.65928.peg.2328 CDS gi|559755614|gb|AYTI01000003.1| 95458 94973 -1 - 486 Cytochrome c nitrite reductase, small subunit NrfH Nitrate and nitrite ammonification
fig|6666666.65928.peg.2329 CDS gi|559755614|gb|AYTI01000003.1| 95696 95845 2 + 150 hypothetical protein - none -
fig|6666666.65928.peg.2330 CDS gi|559755614|gb|AYTI01000003.1| 96171 96022 -3 - 150 hypothetical protein - none -
fig|6666666.65928.peg.2331 CDS gi|559755614|gb|AYTI01000003.1| 97467 96181 -3 - 1287 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65928.peg.2332 CDS gi|559755614|gb|AYTI01000003.1| 97548 98402 3 + 855 FIG00545467: hypothetical protein - none -
fig|6666666.65928.peg.2333 CDS gi|559755614|gb|AYTI01000003.1| 99503 98403 -2 - 1101 FIG00549618: hypothetical protein - none -
fig|6666666.65928.peg.2334 CDS gi|559755614|gb|AYTI01000003.1| 99636 100727 3 + 1092 Putative secreted protein - none -
fig|6666666.65928.peg.2335 CDS gi|559755614|gb|AYTI01000003.1| 101895 100741 -3 - 1155 FIG00549127: hypothetical protein - none -
fig|6666666.65928.peg.2336 CDS gi|559755614|gb|AYTI01000003.1| 102530 101931 -2 - 600 hypothetical protein - none -
fig|6666666.65928.peg.2337 CDS gi|559755614|gb|AYTI01000003.1| 103401 102586 -3 - 816 Putative ABC transport system, ATP-binding subunit - none -
fig|6666666.65928.peg.2338 CDS gi|559755614|gb|AYTI01000003.1| 103670 103398 -2 - 273 hypothetical protein - none -
fig|6666666.65928.peg.2339 CDS gi|559755614|gb|AYTI01000003.1| 104229 103663 -3 - 567 Putative integral membrane protein - none -
fig|6666666.65928.peg.2340 CDS gi|559755614|gb|AYTI01000003.1| 104540 104226 -2 - 315 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65928.peg.2341 CDS gi|559755614|gb|AYTI01000003.1| 109236 104656 -3 - 4581 FIG00549311: hypothetical protein - none -
fig|6666666.65928.peg.2342 CDS gi|559755614|gb|AYTI01000003.1| 110447 109413 -2 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65928.peg.2343 CDS gi|559755614|gb|AYTI01000003.1| 111743 110601 -2 - 1143 fructose-bisphosphate aldolase family protein - none -
fig|6666666.65928.peg.2344 CDS gi|559755614|gb|AYTI01000003.1| 112507 111836 -1 - 672 probable RNA methyltransferase - none -
fig|6666666.65928.peg.2345 CDS gi|559755614|gb|AYTI01000003.1| 113045 112500 -2 - 546 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.65928.peg.2346 CDS gi|559755614|gb|AYTI01000003.1| 114092 113094 -2 - 999 FIG00544840: hypothetical protein - none -
fig|6666666.65928.peg.2347 CDS gi|559755614|gb|AYTI01000003.1| 114939 114103 -3 - 837 Rhodanese-related sulfurtransferase - none -
fig|6666666.65928.peg.2348 CDS gi|559755614|gb|AYTI01000003.1| 116969 115248 -2 - 1722 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.65928.peg.2349 CDS gi|559755614|gb|AYTI01000003.1| 118033 117674 -1 - 360 hypothetical protein - none -
fig|6666666.65928.peg.2350 CDS gi|559755614|gb|AYTI01000003.1| 118699 118061 -1 - 639 hypothetical protein - none -
fig|6666666.65928.peg.2351 CDS gi|559755614|gb|AYTI01000003.1| 122801 119154 -2 - 3648 hypothetical protein - none -
fig|6666666.65928.peg.2352 CDS gi|559755614|gb|AYTI01000003.1| 123622 122804 -1 - 819 Putative surface anchored protein - none -
fig|6666666.65928.peg.2353 CDS gi|559755614|gb|AYTI01000003.1| 124581 123622 -3 - 960 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65928.peg.2354 CDS gi|559755614|gb|AYTI01000003.1| 126368 124815 -2 - 1554 Fimbrial subunit type 2 precursor - none -
fig|6666666.65928.peg.2355 CDS gi|559755614|gb|AYTI01000003.1| 126644 126519 -2 - 126 hypothetical protein - none -
fig|6666666.65928.peg.2356 CDS gi|559755614|gb|AYTI01000003.1| 127059 127946 3 + 888 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65928.peg.2357 CDS gi|559755614|gb|AYTI01000003.1| 130622 128073 -2 - 2550 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65928.peg.2358 CDS gi|559755614|gb|AYTI01000003.1| 130970 131776 2 + 807 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65928.peg.2359 CDS gi|559755614|gb|AYTI01000003.1| 131783 133369 2 + 1587 hypothetical protein - none -
fig|6666666.65928.peg.2360 CDS gi|559755614|gb|AYTI01000003.1| 133572 134399 3 + 828 chromosome partition protein - none -
fig|6666666.65928.peg.2361 CDS gi|559755614|gb|AYTI01000003.1| 134711 135643 2 + 933 chromosome partition protein - none -
fig|6666666.65928.peg.2362 CDS gi|559755614|gb|AYTI01000003.1| 137407 136058 -1 - 1350 FIG00549883: hypothetical protein - none -
fig|6666666.65928.peg.2363 CDS gi|559755614|gb|AYTI01000003.1| 138238 138957 1 + 720 hypothetical protein - none -
fig|6666666.65928.peg.2364 CDS gi|559755614|gb|AYTI01000003.1| 139057 140187 1 + 1131 hypothetical protein - none -
fig|6666666.65928.peg.2365 CDS gi|559755614|gb|AYTI01000003.1| 141010 140249 -1 - 762 hypothetical protein - none -
fig|6666666.65928.peg.2366 CDS gi|559755614|gb|AYTI01000003.1| 141677 141207 -2 - 471 hypothetical protein - none -
fig|6666666.65928.peg.2367 CDS gi|559755614|gb|AYTI01000003.1| 142902 142024 -3 - 879 secretory serine protease - none -
fig|6666666.65928.peg.2368 CDS gi|559755614|gb|AYTI01000003.1| 143905 142928 -1 - 978 Putative membrane protein - none -
fig|6666666.65928.peg.2369 CDS gi|559755614|gb|AYTI01000003.1| 144145 144017 -1 - 129 hypothetical protein - none -
fig|6666666.65928.peg.2370 CDS gi|559755614|gb|AYTI01000003.1| 145461 144193 -3 - 1269 ABC-type transporter, permease component - none -
fig|6666666.65928.peg.2371 CDS gi|559755614|gb|AYTI01000003.1| 146198 145461 -2 - 738 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65928.peg.2372 CDS gi|559755614|gb|AYTI01000003.1| 147989 146199 -2 - 1791 hypothetical protein - none -
fig|6666666.65928.peg.2373 CDS gi|559755614|gb|AYTI01000003.1| 149155 148328 -1 - 828 Putative hydrolase - none -
fig|6666666.65928.peg.2374 CDS gi|559755614|gb|AYTI01000003.1| 149510 150601 2 + 1092 hypothetical protein - none -
fig|6666666.65928.peg.2375 CDS gi|559755614|gb|AYTI01000003.1| 151755 150598 -3 - 1158 Alcohol dehydrogenase (EC 1.1.1.1) Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65928.peg.2376 CDS gi|559755614|gb|AYTI01000003.1| 152782 151772 -1 - 1011 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65928.peg.2377 CDS gi|559755614|gb|AYTI01000003.1| 153291 152782 -3 - 510 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65928.peg.2378 CDS gi|559755614|gb|AYTI01000003.1| 153664 154308 1 + 645 Putative membrane anchored protein - none -
fig|6666666.65928.peg.2379 CDS gi|559755614|gb|AYTI01000003.1| 154487 155725 2 + 1239 Secreted Endo-beta-N-acetylglucosaminidase (EndoS) - none -
fig|6666666.65928.peg.2380 CDS gi|559755614|gb|AYTI01000003.1| 156226 155825 -1 - 402 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65928.peg.2381 CDS gi|559755614|gb|AYTI01000003.1| 157436 156246 -2 - 1191 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65928.peg.2382 CDS gi|559755614|gb|AYTI01000003.1| 158240 157596 -2 - 645 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65928.peg.2383 CDS gi|559755614|gb|AYTI01000003.1| 160069 158237 -1 - 1833 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65928.peg.2384 CDS gi|559755614|gb|AYTI01000003.1| 165941 160380 -2 - 5562 Putative surface-anchored membrane protein - none -
fig|6666666.65928.peg.2385 CDS gi|559755614|gb|AYTI01000003.1| 166699 165944 -1 - 756 potential surface-anchored protein - none -
fig|6666666.65928.peg.2386 CDS gi|559755614|gb|AYTI01000003.1| 167553 166720 -3 - 834 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65928.peg.2387 CDS gi|559755614|gb|AYTI01000003.1| 167552 167680 2 + 129 hypothetical protein - none -
fig|6666666.65928.peg.2388 CDS gi|559755614|gb|AYTI01000003.1| 167935 169296 1 + 1362 putative integral membrane protein - none -
fig|6666666.65928.peg.2389 CDS gi|559755614|gb|AYTI01000003.1| 170003 169338 -2 - 666 Putative ABC transport system, ATP-binding subunit - none -
fig|6666666.65928.peg.2390 CDS gi|559755614|gb|AYTI01000003.1| 171672 169996 -3 - 1677 ABC peptide transporter, ATP-binding component - none -
fig|6666666.65928.peg.2391 CDS gi|559755614|gb|AYTI01000003.1| 172660 171665 -1 - 996 dipeptide/oligopeptide ABC transporter, permease protein - none -
fig|6666666.65928.peg.2392 CDS gi|559755614|gb|AYTI01000003.1| 174380 172740 -2 - 1641 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.65928.peg.2393 CDS gi|559755615|gb|AYTI01000002.1| 2347 797 -1 - 1551 hypothetical protein - none -
fig|6666666.65928.peg.2394 CDS gi|559755615|gb|AYTI01000002.1| 2784 2311 -3 - 474 hypothetical protein - none -
fig|6666666.65928.peg.2395 CDS gi|559755615|gb|AYTI01000002.1| 2843 3631 2 + 789 hypothetical protein - none -
fig|6666666.65928.peg.2396 CDS gi|559755615|gb|AYTI01000002.1| 3860 4024 2 + 165 hypothetical protein - none -
fig|6666666.65928.peg.2397 CDS gi|559755615|gb|AYTI01000002.1| 4401 4538 3 + 138 hypothetical protein - none -
fig|6666666.65928.peg.2398 CDS gi|559755615|gb|AYTI01000002.1| 5726 5013 -2 - 714 putative CAAX amino terminal protease family protein - none -
fig|6666666.65928.peg.2399 CDS gi|559755615|gb|AYTI01000002.1| 5954 5754 -2 - 201 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2) - none -
fig|6666666.65928.peg.2400 CDS gi|559755615|gb|AYTI01000002.1| 6571 5954 -1 - 618 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2) - none -
fig|6666666.65928.peg.2401 CDS gi|559755615|gb|AYTI01000002.1| 7194 6664 -3 - 531 Conserved protein - none -
fig|6666666.65928.peg.2402 CDS gi|559755615|gb|AYTI01000002.1| 7514 7191 -2 - 324 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65928.peg.2403 CDS gi|559755615|gb|AYTI01000002.1| 8737 7739 -1 - 999 periplasmic binding protein - none -
fig|6666666.65928.peg.2404 CDS gi|559755615|gb|AYTI01000002.1| 9517 8747 -1 - 771 ABC transporter iron(III)/siderophore transport system ATP-binding protein - none -
fig|6666666.65928.peg.2405 CDS gi|559755615|gb|AYTI01000002.1| 10620 9514 -3 - 1107 ABC transporter iron(III)/siderophore permease protein - none -
fig|6666666.65928.peg.2406 CDS gi|559755615|gb|AYTI01000002.1| 12104 10722 -2 - 1383 magnesium transport protein - none -
fig|6666666.65928.peg.2407 CDS gi|559755615|gb|AYTI01000002.1| 12106 12273 1 + 168 hypothetical protein - none -
fig|6666666.65928.peg.2408 CDS gi|559755615|gb|AYTI01000002.1| 14109 12511 -3 - 1599 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.65928.peg.2409 CDS gi|559755615|gb|AYTI01000002.1| 15629 14157 -2 - 1473 Lantibiotic ABC transporter - none -
fig|6666666.65928.peg.2410 CDS gi|559755615|gb|AYTI01000002.1| 16324 15629 -1 - 696 ABC transport system ATP-binding protein - none -
fig|6666666.65928.peg.2411 CDS gi|559755615|gb|AYTI01000002.1| 16839 16465 -3 - 375 hypothetical protein - none -
fig|6666666.65928.peg.2412 CDS gi|559755615|gb|AYTI01000002.1| 17560 16904 -1 - 657 DNA-binding response regulator, LuxR family - none -
fig|6666666.65928.peg.2413 CDS gi|559755615|gb|AYTI01000002.1| 18669 17557 -3 - 1113 hypothetical protein - none -
fig|6666666.65928.peg.2414 CDS gi|559755615|gb|AYTI01000002.1| 19169 18753 -2 - 417 hypothetical protein - none -
fig|6666666.65928.peg.2415 CDS gi|559755615|gb|AYTI01000002.1| 20295 19324 -3 - 972 hypothetical protein - none -
fig|6666666.65928.peg.2416 CDS gi|559755615|gb|AYTI01000002.1| 20578 20360 -1 - 219 hypothetical protein - none -
fig|6666666.65928.peg.2417 CDS gi|559755615|gb|AYTI01000002.1| 20705 20580 -2 - 126 hypothetical protein - none -
fig|6666666.65928.peg.2418 CDS gi|559755615|gb|AYTI01000002.1| 21478 20834 -1 - 645 FIG111991: hypothetical protein CBSS-313593.3.peg.2729
fig|6666666.65928.peg.2419 CDS gi|559755615|gb|AYTI01000002.1| 22062 21475 -3 - 588 RNA polymerase sigma-70 factor CBSS-313593.3.peg.2729;
Transcription initiation, bacterial sigma factors
fig|6666666.65928.peg.2420 CDS gi|559755615|gb|AYTI01000002.1| 22445 22122 -2 - 324 hypothetical protein - none -
fig|6666666.65928.peg.2421 CDS gi|559755615|gb|AYTI01000002.1| 22779 22636 -3 - 144 hypothetical protein - none -
fig|6666666.65928.peg.2422 CDS gi|559755615|gb|AYTI01000002.1| 22793 24430 2 + 1638 DipZ protein - none -
fig|6666666.65928.peg.2423 CDS gi|559755615|gb|AYTI01000002.1| 24641 25267 2 + 627 similar to superfamily I DNA and RNA helicases and helicase subunits - none -
fig|6666666.65928.peg.2424 CDS gi|559755615|gb|AYTI01000002.1| 25643 25269 -2 - 375 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65928.peg.2425 CDS gi|559755615|gb|AYTI01000002.1| 25924 25664 -1 - 261 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65928.peg.2426 CDS gi|559755615|gb|AYTI01000002.1| 26564 25926 -2 - 639 choline transport system permease protein - none -
fig|6666666.65928.peg.2427 CDS gi|559755615|gb|AYTI01000002.1| 27448 26561 -1 - 888 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.65928.peg.2428 CDS gi|559755615|gb|AYTI01000002.1| 28347 27778 -3 - 570 putative acetyltransferase - none -
fig|6666666.65928.peg.2429 CDS gi|559755615|gb|AYTI01000002.1| 28665 28498 -3 - 168 hypothetical protein - none -
fig|6666666.65928.peg.2430 CDS gi|559755615|gb|AYTI01000002.1| 30083 28746 -2 - 1338 FIG016551: Putative peptidase - none -
fig|6666666.65928.peg.2431 CDS gi|559755615|gb|AYTI01000002.1| 30287 31282 2 + 996 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65928.peg.2432 CDS gi|559755615|gb|AYTI01000002.1| 31288 31542 1 + 255 FIG00545382: hypothetical protein - none -
fig|6666666.65928.peg.2433 CDS gi|559755615|gb|AYTI01000002.1| 32005 31574 -1 - 432 hypothetical protein - none -
fig|6666666.65928.peg.2434 CDS gi|559755615|gb|AYTI01000002.1| 32139 33548 3 + 1410 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.65928.peg.2435 CDS gi|559755615|gb|AYTI01000002.1| 33625 35049 1 + 1425 Putative lipoprotein - none -
fig|6666666.65928.peg.2436 CDS gi|559755615|gb|AYTI01000002.1| 35274 35495 3 + 222 hypothetical protein - none -
fig|6666666.65928.peg.2437 CDS gi|559755615|gb|AYTI01000002.1| 36227 38461 2 + 2235 Neopullulanase (EC 3.2.1.135) / Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.2438 CDS gi|559755615|gb|AYTI01000002.1| 38581 39069 1 + 489 Neopullulanase (EC 3.2.1.135) / Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.65928.peg.2439 CDS gi|559755615|gb|AYTI01000002.1| 39338 40483 2 + 1146 Putative hydrolase - none -
fig|6666666.65928.peg.2440 CDS gi|559755615|gb|AYTI01000002.1| 41623 40538 -1 - 1086 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.65928.peg.2441 CDS gi|559755615|gb|AYTI01000002.1| 42611 41856 -2 - 756 hypothetical protein - none -
fig|6666666.65928.peg.2442 CDS gi|559755615|gb|AYTI01000002.1| 43404 42772 -3 - 633 hypothetical protein - none -
fig|6666666.65928.peg.2443 CDS gi|559755615|gb|AYTI01000002.1| 43443 44951 3 + 1509 hypothetical protein - none -
fig|6666666.65928.peg.2444 CDS gi|559755615|gb|AYTI01000002.1| 46101 45829 -3 - 273 hypothetical protein - none -
fig|6666666.65928.peg.2445 CDS gi|559755615|gb|AYTI01000002.1| 46221 46391 3 + 171 hypothetical protein - none -
fig|6666666.65928.peg.2446 CDS gi|559755615|gb|AYTI01000002.1| 46501 46671 1 + 171 hypothetical protein - none -
fig|6666666.65928.peg.2447 CDS gi|559755615|gb|AYTI01000002.1| 48191 47256 -2 - 936 hypothetical protein - none -
fig|6666666.65928.peg.2448 CDS gi|559755615|gb|AYTI01000002.1| 48273 50138 3 + 1866 hypothetical protein - none -
fig|6666666.65928.peg.2449 CDS gi|559755615|gb|AYTI01000002.1| 50152 51297 1 + 1146 hypothetical protein - none -
fig|6666666.65928.peg.2450 CDS gi|559755615|gb|AYTI01000002.1| 51551 51790 2 + 240 hypothetical protein - none -
fig|6666666.65928.peg.2451 CDS gi|559755615|gb|AYTI01000002.1| 52098 52364 3 + 267 hypothetical protein - none -
fig|6666666.65928.peg.2452 CDS gi|559755616|gb|AYTI01000001.1| 1572 541 -3 - 1032 hypothetical protein - none -
fig|6666666.65928.peg.2453 CDS gi|559755616|gb|AYTI01000001.1| 2458 1580 -1 - 879 putative ABC transporter ATP-binding protein - none -
fig|6666666.65928.peg.2454 CDS gi|559755616|gb|AYTI01000001.1| 2829 2455 -3 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.65928.peg.2455 CDS gi|559755616|gb|AYTI01000001.1| 3079 4461 1 + 1383 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65928.peg.2456 CDS gi|559755616|gb|AYTI01000001.1| 5437 4565 -1 - 873 FIG00544174: hypothetical protein - none -
fig|6666666.65928.peg.2457 CDS gi|559755616|gb|AYTI01000001.1| 5596 5447 -1 - 150 hypothetical protein - none -
fig|6666666.65928.peg.2458 CDS gi|559755616|gb|AYTI01000001.1| 6424 6056 -1 - 369 Thioredoxin - none -
fig|6666666.65928.peg.2459 CDS gi|559755616|gb|AYTI01000001.1| 6650 6853 2 + 204 Copper chaperone Copper homeostasis
fig|6666666.65928.peg.2460 CDS gi|559755616|gb|AYTI01000001.1| 6988 9279 1 + 2292 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65928.peg.2461 CDS gi|559755616|gb|AYTI01000001.1| 9863 9579 -2 - 285 hypothetical protein - none -
fig|6666666.65928.peg.2462 CDS gi|559755616|gb|AYTI01000001.1| 9939 9826 -3 - 114 transposase for insertion sequence - none -
fig|6666666.65928.peg.2463 CDS gi|559755616|gb|AYTI01000001.1| 10183 10974 1 + 792 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) - none -
fig|6666666.65928.peg.2464 CDS gi|559755616|gb|AYTI01000001.1| 11229 11513 3 + 285 Mobile element protein - none -
fig|6666666.65928.peg.2465 CDS gi|559755616|gb|AYTI01000001.1| 11765 12136 2 + 372 Mobile element protein - none -
fig|6666666.65928.peg.2466 CDS gi|559755616|gb|AYTI01000001.1| 12574 13245 1 + 672 hypothetical protein - none -
fig|6666666.65928.peg.2467 CDS gi|559755616|gb|AYTI01000001.1| 13438 14904 1 + 1467 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.65928.peg.2468 CDS gi|559755616|gb|AYTI01000001.1| 16390 14912 -1 - 1479 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65928.peg.2469 CDS gi|559755616|gb|AYTI01000001.1| 18437 16473 -2 - 1965 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65928.peg.2470 CDS gi|559755616|gb|AYTI01000001.1| 19534 19082 -1 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65928.peg.2471 CDS gi|559755616|gb|AYTI01000001.1| 20201 19635 -2 - 567 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65928.peg.2472 CDS gi|559755616|gb|AYTI01000001.1| 20636 20349 -2 - 288 SSU ribosomal protein S6p - none -
fig|6666666.65928.peg.2473 CDS gi|559755616|gb|AYTI01000001.1| 21125 20943 -2 - 183 hypothetical protein - none -
fig|6666666.65928.peg.2474 CDS gi|559755616|gb|AYTI01000001.1| 22246 21125 -1 - 1122 putative membrane protein - none -
fig|6666666.65928.peg.2475 CDS gi|559755616|gb|AYTI01000001.1| 25161 22891 -3 - 2271 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65928.peg.2476 CDS gi|559755616|gb|AYTI01000001.1| 25971 26432 3 + 462 Transcriptional regulator, MarR family - none -
fig|6666666.65928.peg.2477 CDS gi|559755616|gb|AYTI01000001.1| 26683 26471 -1 - 213 hypothetical protein - none -
fig|6666666.65928.peg.2478 CDS gi|559755616|gb|AYTI01000001.1| 26661 27494 3 + 834 Universal stress protein family - none -
fig|6666666.65928.peg.2479 CDS gi|559755616|gb|AYTI01000001.1| 27539 28207 2 + 669 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.65928.peg.2480 CDS gi|559755616|gb|AYTI01000001.1| 28239 28712 3 + 474 hypothetical membrane protein - none -
fig|6666666.65928.peg.2481 CDS gi|559755616|gb|AYTI01000001.1| 29660 28722 -2 - 939 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65928.peg.2482 CDS gi|559755616|gb|AYTI01000001.1| 29897 30556 2 + 660 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65928.peg.2483 CDS gi|559755616|gb|AYTI01000001.1| 30790 32997 1 + 2208 hypothetical protein - none -
fig|6666666.65928.peg.2484 CDS gi|559755616|gb|AYTI01000001.1| 33591 33100 -3 - 492 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.65928.peg.2485 CDS gi|559755616|gb|AYTI01000001.1| 33666 34475 3 + 810 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65928.peg.2486 CDS gi|559755616|gb|AYTI01000001.1| 34539 36041 3 + 1503 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65928.peg.2487 CDS gi|559755616|gb|AYTI01000001.1| 36559 36038 -1 - 522 hypothetical protein - none -
fig|6666666.65928.peg.2488 CDS gi|559755616|gb|AYTI01000001.1| 38680 36737 -1 - 1944 hypothetical protein - none -
fig|6666666.65928.peg.2489 CDS gi|559755616|gb|AYTI01000001.1| 39190 39699 1 + 510 hypothetical protein - none -
fig|6666666.65928.peg.2490 CDS gi|559755616|gb|AYTI01000001.1| 42666 39766 -3 - 2901 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65928.peg.2491 CDS gi|559755616|gb|AYTI01000001.1| 42933 43058 3 + 126 hypothetical protein - none -
fig|6666666.65928.peg.2492 CDS gi|559755616|gb|AYTI01000001.1| 44600 43917 -2 - 684 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.65928.peg.2493 CDS gi|559755616|gb|AYTI01000001.1| 45649 44597 -1 - 1053 hypothetical protein - none -
fig|6666666.65928.peg.2494 CDS gi|559755616|gb|AYTI01000001.1| 48380 45840 -2 - 2541 hypothetical protein - none -
fig|6666666.65928.peg.2495 CDS gi|559755616|gb|AYTI01000001.1| 48610 49845 1 + 1236 two-component system histidine kinase ChrS - none -
fig|6666666.65928.peg.2496 CDS gi|559755616|gb|AYTI01000001.1| 49842 50441 3 + 600 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65928.peg.2497 CDS gi|559755616|gb|AYTI01000001.1| 51436 50438 -1 - 999 hypothetical protein - none -
fig|6666666.65928.peg.2498 CDS gi|559755616|gb|AYTI01000001.1| 52139 51549 -2 - 591 Conserved integral membrane protein - none -
fig|6666666.65928.peg.2499 CDS gi|559755616|gb|AYTI01000001.1| 52585 52770 1 + 186 hypothetical protein - none -
fig|6666666.65928.peg.2500 CDS gi|559755616|gb|AYTI01000001.1| 56223 53113 -3 - 3111 Putative surface-anchored membrane protein - none -
fig|6666666.65928.peg.2501 CDS gi|559755616|gb|AYTI01000001.1| 56592 56461 -3 - 132 hypothetical protein - none -
fig|6666666.65928.peg.2502 CDS gi|559755616|gb|AYTI01000001.1| 57579 56800 -3 - 780 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.65928.peg.2503 CDS gi|559755616|gb|AYTI01000001.1| 58743 57592 -3 - 1152 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.65928.peg.2504 CDS gi|559755616|gb|AYTI01000001.1| 59446 58754 -1 - 693 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.65928.peg.2505 CDS gi|559755616|gb|AYTI01000001.1| 60396 59482 -3 - 915 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.65928.peg.2506 CDS gi|559755616|gb|AYTI01000001.1| 61166 60393 -2 - 774 Transcriptional regulator, GntR family - none -
fig|6666666.65928.peg.2507 CDS gi|559755616|gb|AYTI01000001.1| 61541 63163 2 + 1623 Putative transport system secreted protein - none -
fig|6666666.65928.peg.2508 CDS gi|559755616|gb|AYTI01000001.1| 63577 64542 1 + 966 ABC-type transporter, permease component - none -
fig|6666666.65928.peg.2509 CDS gi|559755616|gb|AYTI01000001.1| 64542 66575 3 + 2034 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65928.peg.2510 CDS gi|559755616|gb|AYTI01000001.1| 66572 67405 2 + 834 FIG00547092: hypothetical protein - none -
fig|6666666.65928.peg.2511 CDS gi|559755616|gb|AYTI01000001.1| 67432 68355 1 + 924 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65928.peg.2512 CDS gi|559755616|gb|AYTI01000001.1| 68886 68470 -3 - 417 hypothetical protein - none -
fig|6666666.65928.peg.2513 CDS gi|559755616|gb|AYTI01000001.1| 70580 69330 -2 - 1251 FIG00546601: hypothetical protein - none -
fig|6666666.65928.peg.2514 CDS gi|559755616|gb|AYTI01000001.1| 72054 70600 -3 - 1455 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65928.peg.2515 CDS gi|559755616|gb|AYTI01000001.1| 72955 72065 -1 - 891 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.65928.peg.2516 CDS gi|559755616|gb|AYTI01000001.1| 73398 73021 -3 - 378 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.65928.peg.2517 CDS gi|559755616|gb|AYTI01000001.1| 73546 75093 1 + 1548 regulatory protein - none -
fig|6666666.65928.peg.2518 CDS gi|559755616|gb|AYTI01000001.1| 76472 75108 -2 - 1365 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65928.peg.2519 CDS gi|559755616|gb|AYTI01000001.1| 78011 76485 -2 - 1527 amino acid transporter, putative - none -
fig|6666666.65928.peg.2520 CDS gi|559755616|gb|AYTI01000001.1| 78912 78004 -3 - 909 FIG00549302: hypothetical protein - none -
fig|6666666.65928.peg.2521 CDS gi|559755616|gb|AYTI01000001.1| 80399 78915 -2 - 1485 Monoamine/putrescine oxidase (EC 1.4.3.10) Putrescine utilization pathways
fig|6666666.65928.peg.2522 CDS gi|559755616|gb|AYTI01000001.1| 80549 81223 2 + 675 Transcriptional regulator, TetR family - none -
fig|6666666.65928.peg.2523 CDS gi|559755616|gb|AYTI01000001.1| 81660 81247 -3 - 414 hypothetical protein - none -
fig|6666666.65928.peg.2524 CDS gi|559755616|gb|AYTI01000001.1| 81776 81657 -2 - 120 hypothetical protein - none -
fig|6666666.65928.peg.2525 CDS gi|559755616|gb|AYTI01000001.1| 82078 82716 1 + 639 hypothetical protein - none -
fig|6666666.65928.peg.2526 CDS gi|559755616|gb|AYTI01000001.1| 84317 82824 -2 - 1494 ATP-dependent Zn protease - none -
fig|6666666.65928.peg.2527 CDS gi|559755616|gb|AYTI01000001.1| 84690 84511 -3 - 180 hypothetical protein - none -
fig|6666666.65928.peg.2528 CDS gi|559755616|gb|AYTI01000001.1| 85958 84852 -2 - 1107 hypothetical protein - none -
fig|6666666.65928.peg.2529 CDS gi|559755616|gb|AYTI01000001.1| 86965 86057 -1 - 909 hypothetical protein - none -
fig|6666666.65928.peg.2530 CDS gi|559755616|gb|AYTI01000001.1| 88436 87126 -2 - 1311 putative transmembrane symporter - none -
fig|6666666.65928.peg.2531 CDS gi|559755616|gb|AYTI01000001.1| 88960 90093 1 + 1134 Phytoene synthase (EC 2.5.1.32) - none -
fig|6666666.65928.peg.2532 CDS gi|559755616|gb|AYTI01000001.1| 90148 91782 1 + 1635 Phytoene dehydrogenase (EC 1.14.99.-) - none -
fig|6666666.65928.peg.2533 CDS gi|559755616|gb|AYTI01000001.1| 91825 92076 1 + 252 hypothetical protein - none -
fig|6666666.65928.peg.2534 CDS gi|559755616|gb|AYTI01000001.1| 92076 92306 3 + 231 Putative integral membrane protein - none -
fig|6666666.65928.peg.2535 CDS gi|559755616|gb|AYTI01000001.1| 92513 94132 2 + 1620 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65928.peg.2536 CDS gi|559755616|gb|AYTI01000001.1| 94129 94776 1 + 648 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65928.peg.2537 CDS gi|559755616|gb|AYTI01000001.1| 94821 95846 3 + 1026 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65928.peg.2538 CDS gi|559755616|gb|AYTI01000001.1| 95836 97326 1 + 1491 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.65928.peg.2539 CDS gi|559755616|gb|AYTI01000001.1| 97576 97698 1 + 123 hypothetical protein - none -
fig|6666666.65928.peg.2540 CDS gi|559755616|gb|AYTI01000001.1| 97750 99000 1 + 1251 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65928.peg.2541 CDS gi|559755616|gb|AYTI01000001.1| 99003 99842 3 + 840 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.65928.peg.2542 CDS gi|559755616|gb|AYTI01000001.1| 100086 100436 3 + 351 Putative iron-sulphur protein - none -
fig|6666666.65928.peg.2543 CDS gi|559755616|gb|AYTI01000001.1| 100489 101457 1 + 969 Sodium - Bile acid symporter - none -
fig|6666666.65928.peg.2544 CDS gi|559755616|gb|AYTI01000001.1| 101512 101796 1 + 285 hypothetical protein - none -
fig|6666666.65928.peg.2545 CDS gi|559755616|gb|AYTI01000001.1| 102232 101879 -1 - 354 hypothetical membrane protein - none -
fig|6666666.65928.peg.2546 CDS gi|559755616|gb|AYTI01000001.1| 102900 102229 -3 - 672 Branched-chain amino acid transport protein azlC - none -
fig|6666666.65928.rna.1 RNA gi|559755377|gb|AYTI01000240.1| 339 254 -3 - 86 tRNA-Leu-CAG tRNAs
fig|6666666.65928.rna.2 RNA gi|559755433|gb|AYTI01000184.1| 158 75 -2 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.65928.rna.3 RNA gi|559755491|gb|AYTI01000126.1| 148 231 1 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.65928.rna.4 RNA gi|559755528|gb|AYTI01000089.1| 291 411 3 + 121 5S RNA - none -
fig|6666666.65928.rna.5 RNA gi|559755532|gb|AYTI01000085.1| 101 14 -2 - 88 tRNA-Ser-CGA tRNAs
fig|6666666.65928.rna.6 RNA gi|559755535|gb|AYTI01000082.1| 240 158 -3 - 83 tRNA-Leu-CAG tRNAs
fig|6666666.65928.rna.7 RNA gi|559755536|gb|AYTI01000081.1| 153 569 3 + 417 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65928.rna.8 RNA gi|559755537|gb|AYTI01000080.1| 231 515 3 + 285 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65928.rna.9 RNA gi|559755538|gb|AYTI01000079.1| 84 430 3 + 347 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65928.rna.10 RNA gi|559755539|gb|AYTI01000078.1| 84 548 3 + 465 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65928.rna.11 RNA gi|559755554|gb|AYTI01000063.1| 7802 7874 2 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65928.rna.12 RNA gi|559755555|gb|AYTI01000062.1| 345 417 3 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65928.rna.13 RNA gi|559755566|gb|AYTI01000051.1| 7615 7543 -1 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65928.rna.14 RNA gi|559755576|gb|AYTI01000041.1| 161 233 2 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65928.rna.15 RNA gi|559755577|gb|AYTI01000040.1| 98 170 2 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65928.rna.16 RNA gi|559755577|gb|AYTI01000040.1| 6622 6694 1 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65928.rna.17 RNA gi|559755578|gb|AYTI01000039.1| 11573 11501 -2 - 73 tRNA-Val-TAC - none -
fig|6666666.65928.rna.18 RNA gi|559755579|gb|AYTI01000038.1| 6220 6148 -1 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.65928.rna.19 RNA gi|559755579|gb|AYTI01000038.1| 6315 6242 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.65928.rna.20 RNA gi|559755579|gb|AYTI01000038.1| 7746 7673 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.65928.rna.21 RNA gi|559755579|gb|AYTI01000038.1| 7845 7773 -3 - 73 tRNA-Glu-TTC - none -
fig|6666666.65928.rna.22 RNA gi|559755579|gb|AYTI01000038.1| 8157 8085 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.65928.rna.23 RNA gi|559755581|gb|AYTI01000036.1| 87 15 -3 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.65928.rna.24 RNA gi|559755581|gb|AYTI01000036.1| 223 135 -1 - 89 tRNA-Pseudo-GCT - none -
fig|6666666.65928.rna.25 RNA gi|559755581|gb|AYTI01000036.1| 3230 3146 -2 - 85 tRNA-Ser-TGA - none -
fig|6666666.65928.rna.26 RNA gi|559755584|gb|AYTI01000033.1| 22558 22487 -1 - 72 tRNA-Val-CAC tRNAs
fig|6666666.65928.rna.27 RNA gi|559755584|gb|AYTI01000033.1| 22925 22997 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.65928.rna.28 RNA gi|559755584|gb|AYTI01000033.1| 23024 23095 2 + 72 tRNA-Val-GAC tRNAs
fig|6666666.65928.rna.29 RNA gi|559755584|gb|AYTI01000033.1| 23135 23207 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.65928.rna.30 RNA gi|559755584|gb|AYTI01000033.1| 23241 23311 3 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.65928.rna.31 RNA gi|559755584|gb|AYTI01000033.1| 23320 23391 1 + 72 tRNA-Val-GAC tRNAs
fig|6666666.65928.rna.32 RNA gi|559755586|gb|AYTI01000031.1| 292 219 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.65928.rna.33 RNA gi|559755586|gb|AYTI01000031.1| 519 591 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.65928.rna.34 RNA gi|559755589|gb|AYTI01000028.1| 11899 11971 1 + 73 tRNA-Thr-TGT - none -
fig|6666666.65928.rna.35 RNA gi|559755594|gb|AYTI01000023.1| 12387 12315 -3 - 73 tRNA-Ala-TGC - none -
fig|6666666.65928.rna.36 RNA gi|559755594|gb|AYTI01000023.1| 14413 14341 -1 - 73 tRNA-Ala-TGC - none -
fig|6666666.65928.rna.37 RNA gi|559755594|gb|AYTI01000023.1| 14498 14425 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.65928.rna.38 RNA gi|559755595|gb|AYTI01000022.1| 345 225 -3 - 121 5S RNA - none -
fig|6666666.65928.rna.39 RNA gi|559755595|gb|AYTI01000022.1| 3546 439 -3 - 3108 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65928.rna.40 RNA gi|559755595|gb|AYTI01000022.1| 5174 3924 -2 - 1251 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65928.rna.41 RNA gi|559755596|gb|AYTI01000021.1| 6168 6096 -3 - 73 tRNA-Glu-CTC - none -
fig|6666666.65928.rna.42 RNA gi|559755596|gb|AYTI01000021.1| 8623 8551 -1 - 73 tRNA-Glu-CTC - none -
fig|6666666.65928.rna.43 RNA gi|559755596|gb|AYTI01000021.1| 8728 8657 -1 - 72 tRNA-Gln-CTG - none -
fig|6666666.65928.rna.44 RNA gi|559755597|gb|AYTI01000020.1| 25219 25292 1 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.65928.rna.45 RNA gi|559755598|gb|AYTI01000019.1| 17884 17799 -1 - 86 tRNA-Leu-GAG tRNAs
fig|6666666.65928.rna.46 RNA gi|559755598|gb|AYTI01000019.1| 102802 102875 1 + 74 tRNA-Pro-GGG tRNAs
fig|6666666.65928.rna.47 RNA gi|559755598|gb|AYTI01000019.1| 139913 139797 -2 - 117 5S RNA - none -
fig|6666666.65928.rna.48 RNA gi|559755601|gb|AYTI01000016.1| 93345 93273 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65928.rna.49 RNA gi|559755602|gb|AYTI01000015.1| 46257 46329 3 + 73 tRNA-Arg-CCT - none -
fig|6666666.65928.rna.50 RNA gi|559755603|gb|AYTI01000014.1| 287 1 -2 - 287 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65928.rna.51 RNA gi|559755604|gb|AYTI01000013.1| 26759 26829 2 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.65928.rna.52 RNA gi|559755605|gb|AYTI01000012.1| 31064 31137 2 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.65928.rna.53 RNA gi|559755605|gb|AYTI01000012.1| 97564 97649 1 + 86 tRNA-Pseudo-GGA - none -
fig|6666666.65928.rna.54 RNA gi|559755605|gb|AYTI01000012.1| 106602 106515 -3 - 88 tRNA-Ser-CGA tRNAs
fig|6666666.65928.rna.55 RNA gi|559755606|gb|AYTI01000011.1| 26622 26705 3 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.65928.rna.56 RNA gi|559755607|gb|AYTI01000010.1| 3100 3028 -1 - 73 tRNA-Arg-CCG tRNAs
fig|6666666.65928.rna.57 RNA gi|559755608|gb|AYTI01000009.1| 76107 76034 -3 - 74 tRNA-Leu-TAA - none -
fig|6666666.65928.rna.58 RNA gi|559755608|gb|AYTI01000009.1| 88151 88080 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.65928.rna.59 RNA gi|559755609|gb|AYTI01000008.1| 12067 12148 1 + 82 tRNA-Leu-TAG - none -
fig|6666666.65928.rna.60 RNA gi|559755609|gb|AYTI01000008.1| 32637 32565 -3 - 73 tRNA-Lys-CTT - none -
fig|6666666.65928.rna.61 RNA gi|559755609|gb|AYTI01000008.1| 35230 35158 -1 - 73 tRNA-His-GTG - none -
fig|6666666.65928.rna.62 RNA gi|559755609|gb|AYTI01000008.1| 41285 41212 -2 - 74 tRNA-Arg-TCT - none -
fig|6666666.65928.rna.63 RNA gi|559755609|gb|AYTI01000008.1| 73030 73101 1 + 72 tRNA-Gly-TCC - none -
fig|6666666.65928.rna.64 RNA gi|559755609|gb|AYTI01000008.1| 73494 73567 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.65928.rna.65 RNA gi|559755610|gb|AYTI01000007.1| 154 226 1 + 73 tRNA-Thr-CGT - none -
fig|6666666.65928.rna.66 RNA gi|559755610|gb|AYTI01000007.1| 112563 112644 3 + 82 tRNA-Tyr-GTA - none -
fig|6666666.65928.rna.67 RNA gi|559755610|gb|AYTI01000007.1| 113003 113075 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.65928.rna.68 RNA gi|559755610|gb|AYTI01000007.1| 113114 113185 2 + 72 tRNA-Met-CAT - none -
fig|6666666.65928.rna.69 RNA gi|559755610|gb|AYTI01000007.1| 113313 113385 3 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.65928.rna.70 RNA gi|559755610|gb|AYTI01000007.1| 382980 383053 3 + 74 tRNA-Met-CAT - none -
fig|6666666.65928.rna.71 RNA gi|559755615|gb|AYTI01000002.1| 209 292 2 + 84 tRNA-Leu-CAG tRNAs