fig|6666666.65929.peg.1 CDS gi|480756708|gb|AQUY01000008.1| 364 182 -1 - 183 hypothetical protein - none -
fig|6666666.65929.peg.2 CDS gi|480756708|gb|AQUY01000008.1| 962 651 -2 - 312 hypothetical protein - none -
fig|6666666.65929.peg.3 CDS gi|480756712|gb|AQUY01000007.1| 631 747 1 + 117 hypothetical protein - none -
fig|6666666.65929.peg.4 CDS gi|480756712|gb|AQUY01000007.1| 1166 1005 -2 - 162 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65929.peg.6 CDS gi|480756726|gb|AQUY01000004.1| 747 2099 3 + 1353 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.65929.peg.7 CDS gi|480756726|gb|AQUY01000004.1| 3181 2216 -1 - 966 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65929.peg.8 CDS gi|480756726|gb|AQUY01000004.1| 3313 4440 1 + 1128 putative secreted protein - none -
fig|6666666.65929.peg.9 CDS gi|480756726|gb|AQUY01000004.1| 4893 4504 -3 - 390 Thioredoxin - none -
fig|6666666.65929.peg.10 CDS gi|480756726|gb|AQUY01000004.1| 5161 5364 1 + 204 Copper(I) chaperone CopZ Copper Transport System
fig|6666666.65929.peg.11 CDS gi|480756726|gb|AQUY01000004.1| 5409 7688 3 + 2280 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65929.peg.12 CDS gi|480756726|gb|AQUY01000004.1| 7693 9381 1 + 1689 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65929.peg.13 CDS gi|480756726|gb|AQUY01000004.1| 9650 10636 2 + 987 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.65929.peg.14 CDS gi|480756726|gb|AQUY01000004.1| 12571 11408 -1 - 1164 hypothetical protein - none -
fig|6666666.65929.peg.15 CDS gi|480756726|gb|AQUY01000004.1| 14384 12810 -2 - 1575 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.65929.peg.16 CDS gi|480756726|gb|AQUY01000004.1| 14511 14359 -3 - 153 hypothetical protein - none -
fig|6666666.65929.peg.17 CDS gi|480756726|gb|AQUY01000004.1| 14647 14820 1 + 174 hypothetical protein - none -
fig|6666666.65929.peg.18 CDS gi|480756726|gb|AQUY01000004.1| 15562 15110 -1 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.65929.peg.19 CDS gi|480756726|gb|AQUY01000004.1| 16211 15657 -2 - 555 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65929.peg.20 CDS gi|480756726|gb|AQUY01000004.1| 16572 16285 -3 - 288 SSU ribosomal protein S6p - none -
fig|6666666.65929.peg.21 CDS gi|480756726|gb|AQUY01000004.1| 16965 16768 -3 - 198 hypothetical protein - none -
fig|6666666.65929.peg.22 CDS gi|480756726|gb|AQUY01000004.1| 19336 16970 -1 - 2367 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65929.peg.23 CDS gi|480756726|gb|AQUY01000004.1| 19876 20967 1 + 1092 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.65929.peg.24 CDS gi|480756726|gb|AQUY01000004.1| 21180 21689 3 + 510 Transcriptional regulator, MarR family - none -
fig|6666666.65929.peg.25 CDS gi|480756726|gb|AQUY01000004.1| 21723 22634 3 + 912 Universal stress protein family - none -
fig|6666666.65929.peg.26 CDS gi|480756726|gb|AQUY01000004.1| 22649 23125 2 + 477 hypothetical membrane protein - none -
fig|6666666.65929.peg.27 CDS gi|480756726|gb|AQUY01000004.1| 26087 23217 -2 - 2871 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.65929.peg.28 CDS gi|480756726|gb|AQUY01000004.1| 26169 26651 3 + 483 hypothetical protein - none -
fig|6666666.65929.peg.29 CDS gi|480756726|gb|AQUY01000004.1| 26665 27684 1 + 1020 Sodium - Bile acid symporter - none -
fig|6666666.65929.peg.30 CDS gi|480756726|gb|AQUY01000004.1| 28289 27681 -2 - 609 Putative transcriptional regulator - none -
fig|6666666.65929.peg.31 CDS gi|480756726|gb|AQUY01000004.1| 29795 28308 -2 - 1488 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.65929.peg.32 CDS gi|480756726|gb|AQUY01000004.1| 29860 30921 1 + 1062 MutT/nudix family protein - none -
fig|6666666.65929.peg.33 CDS gi|480756726|gb|AQUY01000004.1| 30918 33482 3 + 2565 hypothetical protein - none -
fig|6666666.65929.peg.34 CDS gi|480756726|gb|AQUY01000004.1| 33495 35945 3 + 2451 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.65929.peg.35 CDS gi|480756726|gb|AQUY01000004.1| 36073 36630 1 + 558 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.65929.peg.36 CDS gi|480756726|gb|AQUY01000004.1| 36687 37325 3 + 639 hypothetical protein - none -
fig|6666666.65929.peg.37 CDS gi|480756726|gb|AQUY01000004.1| 37384 38334 1 + 951 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65929.peg.38 CDS gi|480756726|gb|AQUY01000004.1| 38444 38767 2 + 324 Thioredoxin - none -
fig|6666666.65929.peg.39 CDS gi|480756726|gb|AQUY01000004.1| 38845 40035 1 + 1191 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.65929.peg.40 CDS gi|480756726|gb|AQUY01000004.1| 40732 40082 -1 - 651 FIG007808: hypothetical protein - none -
fig|6666666.65929.peg.41 CDS gi|480756726|gb|AQUY01000004.1| 41909 40779 -2 - 1131 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65929.peg.42 CDS gi|480756726|gb|AQUY01000004.1| 42914 41988 -2 - 927 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65929.peg.43 CDS gi|480756726|gb|AQUY01000004.1| 43985 43227 -2 - 759 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.65929.peg.44 CDS gi|480756726|gb|AQUY01000004.1| 44558 44064 -2 - 495 RNA-binding protein Jag Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD
fig|6666666.65929.peg.45 CDS gi|480756726|gb|AQUY01000004.1| 45736 44678 -1 - 1059 Inner membrane protein translocase component YidC, long form Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD
fig|6666666.65929.peg.46 CDS gi|480756726|gb|AQUY01000004.1| 46296 46144 -3 - 153 hypothetical protein - none -
fig|6666666.65929.peg.47 CDS gi|480756726|gb|AQUY01000004.1| 46841 46554 -2 - 288 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.65929.peg.48 CDS gi|480756726|gb|AQUY01000004.1| 47389 49119 1 + 1731 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.65929.peg.49 CDS gi|480756726|gb|AQUY01000004.1| 49761 51023 3 + 1263 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.65929.peg.50 CDS gi|480756726|gb|AQUY01000004.1| 51036 52265 3 + 1230 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65929.peg.51 CDS gi|480756726|gb|AQUY01000004.1| 52258 52863 1 + 606 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.65929.peg.52 CDS gi|480756726|gb|AQUY01000004.1| 53003 55054 2 + 2052 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65929.peg.53 CDS gi|480756726|gb|AQUY01000004.1| 55068 55976 3 + 909 FIG00544157: hypothetical protein - none -
fig|6666666.65929.peg.54 CDS gi|480756726|gb|AQUY01000004.1| 56212 55973 -1 - 240 hypothetical protein - none -
fig|6666666.65929.peg.55 CDS gi|480756726|gb|AQUY01000004.1| 56450 56241 -2 - 210 Prevent host death protein, Phd antitoxin # A - none -
fig|6666666.65929.peg.56 CDS gi|480756726|gb|AQUY01000004.1| 56597 59119 2 + 2523 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.65929.peg.57 CDS gi|480756726|gb|AQUY01000004.1| 59124 59486 3 + 363 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.65929.peg.58 CDS gi|480756726|gb|AQUY01000004.1| 60084 60731 3 + 648 serine protease, subtilase family - none -
fig|6666666.65929.peg.59 CDS gi|480756726|gb|AQUY01000004.1| 60682 61773 1 + 1092 serine protease, subtilase family - none -
fig|6666666.65929.peg.60 CDS gi|480756726|gb|AQUY01000004.1| 62027 61800 -2 - 228 hypothetical protein - none -
fig|6666666.65929.peg.61 CDS gi|480756726|gb|AQUY01000004.1| 62194 62403 1 + 210 hypothetical protein - none -
fig|6666666.65929.peg.62 CDS gi|480756726|gb|AQUY01000004.1| 62427 62951 3 + 525 hypothetical protein - none -
fig|6666666.65929.peg.63 CDS gi|480756726|gb|AQUY01000004.1| 63375 62929 -3 - 447 Transcriptional regulator, AsnC family - none -
fig|6666666.65929.peg.64 CDS gi|480756726|gb|AQUY01000004.1| 63455 64162 2 + 708 hypothetical protein - none -
fig|6666666.65929.peg.65 CDS gi|480756726|gb|AQUY01000004.1| 64172 64537 2 + 366 probable branched chain amino acid transport protein - none -
fig|6666666.65929.peg.66 CDS gi|480756726|gb|AQUY01000004.1| 65524 64571 -1 - 954 histone H1 - none -
fig|6666666.65929.peg.67 CDS gi|480756726|gb|AQUY01000004.1| 65624 66169 2 + 546 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.65929.peg.68 CDS gi|480756726|gb|AQUY01000004.1| 66335 67000 2 + 666 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.65929.peg.69 CDS gi|480756726|gb|AQUY01000004.1| 67697 67542 -2 - 156 FIG018426: putative septation inhibitor protein - none -
fig|6666666.65929.peg.70 CDS gi|480756726|gb|AQUY01000004.1| 67696 67830 1 + 135 hypothetical protein - none -
fig|6666666.65929.peg.71 CDS gi|480756726|gb|AQUY01000004.1| 70087 67931 -1 - 2157 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.65929.peg.72 CDS gi|480756726|gb|AQUY01000004.1| 71761 70154 -1 - 1608 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.65929.peg.73 CDS gi|480756726|gb|AQUY01000004.1| 73211 71787 -2 - 1425 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.74 CDS gi|480756726|gb|AQUY01000004.1| 74659 73211 -1 - 1449 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65929.peg.75 CDS gi|480756726|gb|AQUY01000004.1| 76221 74656 -3 - 1566 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.65929.peg.76 CDS gi|480756726|gb|AQUY01000004.1| 76763 76218 -2 - 546 FHA-domain-containing proteins - none -
fig|6666666.65929.peg.77 CDS gi|480756726|gb|AQUY01000004.1| 77716 76805 -1 - 912 hypothetical protein - none -
fig|6666666.65929.peg.78 CDS gi|480756726|gb|AQUY01000004.1| 79091 79702 2 + 612 probable transcriptional regulator - none -
fig|6666666.65929.peg.79 CDS gi|480756726|gb|AQUY01000004.1| 80619 79735 -3 - 885 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) Valine degradation
fig|6666666.65929.peg.80 CDS gi|480756726|gb|AQUY01000004.1| 82183 80666 -1 - 1518 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) Valine degradation
fig|6666666.65929.peg.81 CDS gi|480756726|gb|AQUY01000004.1| 82456 84864 1 + 2409 acyl-CoA synthetase (NDP forming type) - none -
fig|6666666.65929.peg.82 CDS gi|480756726|gb|AQUY01000004.1| 84875 86026 2 + 1152 NAD-independent protein deacetylase AcuC Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.83 CDS gi|480756726|gb|AQUY01000004.1| 86031 86600 3 + 570 Transcriptional regulator, TetR family - none -
fig|6666666.65929.peg.84 CDS gi|480756726|gb|AQUY01000004.1| 86829 88568 3 + 1740 Acetyl-coenzyme A synthetase (EC 6.2.1.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.85 CDS gi|480756726|gb|AQUY01000004.1| 89390 88578 -2 - 813 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Valine degradation
fig|6666666.65929.peg.86 CDS gi|480756726|gb|AQUY01000004.1| 90418 89390 -1 - 1029 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) Valine degradation
fig|6666666.65929.peg.87 CDS gi|480756726|gb|AQUY01000004.1| 91646 90543 -2 - 1104 hypothetical protein - none -
fig|6666666.65929.peg.88 CDS gi|480756726|gb|AQUY01000004.1| 92623 91724 -1 - 900 hypothetical protein - none -
fig|6666666.65929.peg.89 CDS gi|480756726|gb|AQUY01000004.1| 92982 92641 -3 - 342 Protein secretion chaperonin CsaA - none -
fig|6666666.65929.peg.90 CDS gi|480756726|gb|AQUY01000004.1| 93017 93550 2 + 534 protein of unknown function DUF1130 - none -
fig|6666666.65929.peg.91 CDS gi|480756726|gb|AQUY01000004.1| 93577 94584 1 + 1008 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.65929.peg.92 CDS gi|480756726|gb|AQUY01000004.1| 94809 96050 3 + 1242 hypothetical protein - none -
fig|6666666.65929.peg.93 CDS gi|480756726|gb|AQUY01000004.1| 96054 96611 3 + 558 putative acetyltransferase - none -
fig|6666666.65929.peg.94 CDS gi|480756726|gb|AQUY01000004.1| 97817 96615 -2 - 1203 No significant database matches - none -
fig|6666666.65929.peg.95 CDS gi|480756726|gb|AQUY01000004.1| 98271 97873 -3 - 399 putative RNA polymerase ECF-subfamily sigma factor - none -
fig|6666666.65929.peg.96 CDS gi|480756726|gb|AQUY01000004.1| 98915 98421 -2 - 495 Putative membrane protein - none -
fig|6666666.65929.peg.97 CDS gi|480756726|gb|AQUY01000004.1| 99467 99018 -2 - 450 hypothetical protein - none -
fig|6666666.65929.peg.98 CDS gi|480756726|gb|AQUY01000004.1| 99566 100297 2 + 732 hypothetical protein - none -
fig|6666666.65929.peg.99 CDS gi|480756726|gb|AQUY01000004.1| 100743 100294 -3 - 450 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.100 CDS gi|480756726|gb|AQUY01000004.1| 101907 100810 -3 - 1098 FIG00546797: hypothetical protein - none -
fig|6666666.65929.peg.101 CDS gi|480756726|gb|AQUY01000004.1| 101994 102524 3 + 531 putative secreted protein - none -
fig|6666666.65929.peg.102 CDS gi|480756726|gb|AQUY01000004.1| 111712 102545 -1 - 9168 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.65929.peg.103 CDS gi|480756726|gb|AQUY01000004.1| 113381 111780 -2 - 1602 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65929.peg.104 CDS gi|480756726|gb|AQUY01000004.1| 115148 113385 -2 - 1764 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.105 CDS gi|480756726|gb|AQUY01000004.1| 115891 115295 -1 - 597 TetR family transcriptional regulator - none -
fig|6666666.65929.peg.106 CDS gi|480756726|gb|AQUY01000004.1| 116074 116919 1 + 846 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.65929.peg.107 CDS gi|480756726|gb|AQUY01000004.1| 116924 117430 2 + 507 hypothetical protein - none -
fig|6666666.65929.peg.108 CDS gi|480756726|gb|AQUY01000004.1| 117438 117611 3 + 174 hypothetical protein - none -
fig|6666666.65929.peg.109 CDS gi|480756726|gb|AQUY01000004.1| 118477 117608 -1 - 870 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65929.peg.110 CDS gi|480756726|gb|AQUY01000004.1| 118554 119843 3 + 1290 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65929.peg.111 CDS gi|480756726|gb|AQUY01000004.1| 120601 119840 -1 - 762 FIG00547049: hypothetical protein - none -
fig|6666666.65929.peg.112 CDS gi|480756726|gb|AQUY01000004.1| 120738 121457 3 + 720 hypothetical protein - none -
fig|6666666.65929.peg.113 CDS gi|480756726|gb|AQUY01000004.1| 123079 121502 -1 - 1578 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.65929.peg.114 CDS gi|480756726|gb|AQUY01000004.1| 123373 124116 1 + 744 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65929.peg.115 CDS gi|480756726|gb|AQUY01000004.1| 126781 124148 -1 - 2634 ATP-dependent helicase HrpB - none -
fig|6666666.65929.peg.116 CDS gi|480756726|gb|AQUY01000004.1| 126818 127678 2 + 861 hypothetical protein - none -
fig|6666666.65929.peg.117 CDS gi|480756726|gb|AQUY01000004.1| 127800 129152 3 + 1353 hypothetical protein - none -
fig|6666666.65929.peg.118 CDS gi|480756726|gb|AQUY01000004.1| 129496 129149 -1 - 348 Putative iron-sulphur protein - none -
fig|6666666.65929.peg.119 CDS gi|480756726|gb|AQUY01000004.1| 129584 130480 2 + 897 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.65929.peg.120 CDS gi|480756726|gb|AQUY01000004.1| 130467 130985 3 + 519 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.65929.peg.121 CDS gi|480756726|gb|AQUY01000004.1| 130995 131648 3 + 654 nitroreductase - none -
fig|6666666.65929.peg.122 CDS gi|480756726|gb|AQUY01000004.1| 133721 131658 -2 - 2064 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.65929.peg.123 CDS gi|480756726|gb|AQUY01000004.1| 133850 134593 2 + 744 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65929.peg.124 CDS gi|480756726|gb|AQUY01000004.1| 134633 136726 2 + 2094 Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) - none -
fig|6666666.65929.peg.125 CDS gi|480756726|gb|AQUY01000004.1| 136952 136731 -2 - 222 hypothetical protein - none -
fig|6666666.65929.peg.126 CDS gi|480756726|gb|AQUY01000004.1| 138586 137387 -1 - 1200 possible transcriptional regulator, ROK family - none -
fig|6666666.65929.peg.127 CDS gi|480756726|gb|AQUY01000004.1| 138680 139000 2 + 321 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.65929.peg.128 CDS gi|480756726|gb|AQUY01000004.1| 139000 139854 1 + 855 putative hydroxylase - none -
fig|6666666.65929.peg.129 CDS gi|480756726|gb|AQUY01000004.1| 140008 139859 -1 - 150 hypothetical protein - none -
fig|6666666.65929.peg.130 CDS gi|480756726|gb|AQUY01000004.1| 140429 141595 2 + 1167 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.65929.peg.131 CDS gi|480756726|gb|AQUY01000004.1| 143614 141596 -1 - 2019 putative endopeptidase - none -
fig|6666666.65929.peg.132 CDS gi|480756726|gb|AQUY01000004.1| 143687 144244 2 + 558 hypothetical protein - none -
fig|6666666.65929.peg.133 CDS gi|480756726|gb|AQUY01000004.1| 144244 145197 1 + 954 putative integral membrane protein - none -
fig|6666666.65929.peg.134 CDS gi|480756726|gb|AQUY01000004.1| 148559 145287 -2 - 3273 putative arabinosyltransferase - none -
fig|6666666.65929.peg.135 CDS gi|480756726|gb|AQUY01000004.1| 150710 148740 -2 - 1971 putative membrane protein - none -
fig|6666666.65929.peg.136 CDS gi|480756726|gb|AQUY01000004.1| 151540 150779 -1 - 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.65929.peg.137 CDS gi|480756726|gb|AQUY01000004.1| 153033 151567 -3 - 1467 Oxidoreductase, FAD-binding protein - none -
fig|6666666.65929.peg.138 CDS gi|480756726|gb|AQUY01000004.1| 154038 153145 -3 - 894 putative dehydrogenase related to short-chain alcohol dehydrogenases - none -
fig|6666666.65929.peg.139 CDS gi|480756726|gb|AQUY01000004.1| 154790 154903 2 + 114 hypothetical protein - none -
fig|6666666.65929.peg.140 CDS gi|480756726|gb|AQUY01000004.1| 155899 155669 -1 - 231 hypothetical protein - none -
fig|6666666.65929.peg.141 CDS gi|480756726|gb|AQUY01000004.1| 155924 156454 2 + 531 hypothetical protein - none -
fig|6666666.65929.peg.142 CDS gi|480756726|gb|AQUY01000004.1| 156458 157093 2 + 636 No significant database matches - none -
fig|6666666.65929.peg.143 CDS gi|480756726|gb|AQUY01000004.1| 157265 158452 2 + 1188 hypothetical protein - none -
fig|6666666.65929.peg.144 CDS gi|480756726|gb|AQUY01000004.1| 158466 159428 3 + 963 hypothetical protein - none -
fig|6666666.65929.peg.145 CDS gi|480756726|gb|AQUY01000004.1| 159455 159886 2 + 432 hypothetical protein - none -
fig|6666666.65929.peg.146 CDS gi|480756726|gb|AQUY01000004.1| 160865 159915 -2 - 951 Putative glycosyl transferase - none -
fig|6666666.65929.peg.147 CDS gi|480756726|gb|AQUY01000004.1| 161724 160942 -3 - 783 O-antigen export system, ATP-binding protein - none -
fig|6666666.65929.peg.148 CDS gi|480756726|gb|AQUY01000004.1| 162729 161764 -3 - 966 O-antigen export system permease protein RfbD - none -
fig|6666666.65929.peg.149 CDS gi|480756726|gb|AQUY01000004.1| 162838 164109 1 + 1272 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65929.peg.150 CDS gi|480756726|gb|AQUY01000004.1| 164545 164138 -1 - 408 putative membrane protein - none -
fig|6666666.65929.peg.151 CDS gi|480756726|gb|AQUY01000004.1| 165560 164574 -2 - 987 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.65929.peg.152 CDS gi|480756726|gb|AQUY01000004.1| 165802 166194 1 + 393 hypothetical protein - none -
fig|6666666.65929.peg.153 CDS gi|480756726|gb|AQUY01000004.1| 166194 167144 3 + 951 FIG00546046: hypothetical protein - none -
fig|6666666.65929.peg.154 CDS gi|480756726|gb|AQUY01000004.1| 167210 168874 2 + 1665 Putative pyridine nucleotide-disulphide oxidoreductase - none -
fig|6666666.65929.peg.155 CDS gi|480756726|gb|AQUY01000004.1| 169306 169977 1 + 672 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65929.peg.156 CDS gi|480756726|gb|AQUY01000004.1| 169974 171197 3 + 1224 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65929.peg.157 CDS gi|480756726|gb|AQUY01000004.1| 171262 171804 1 + 543 ThiJ/PfpI family protein - none -
fig|6666666.65929.peg.158 CDS gi|480756726|gb|AQUY01000004.1| 172088 173704 2 + 1617 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.65929.peg.159 CDS gi|480756726|gb|AQUY01000004.1| 175202 174018 -2 - 1185 Mobile element protein - none -
fig|6666666.65929.peg.160 CDS gi|480756726|gb|AQUY01000004.1| 175682 175825 2 + 144 hypothetical protein - none -
fig|6666666.65929.peg.161 CDS gi|480756726|gb|AQUY01000004.1| 175873 176349 1 + 477 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65929.peg.162 CDS gi|480756726|gb|AQUY01000004.1| 176453 176644 2 + 192 hypothetical protein - none -
fig|6666666.65929.peg.163 CDS gi|480756726|gb|AQUY01000004.1| 176651 177631 2 + 981 luciferase family protein - none -
fig|6666666.65929.peg.164 CDS gi|480756726|gb|AQUY01000004.1| 178679 177660 -2 - 1020 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65929.peg.165 CDS gi|480756726|gb|AQUY01000004.1| 178728 179291 3 + 564 hypothetical protein - none -
fig|6666666.65929.peg.166 CDS gi|480756726|gb|AQUY01000004.1| 179298 179792 3 + 495 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) - none -
fig|6666666.65929.peg.167 CDS gi|480756726|gb|AQUY01000004.1| 180093 182603 3 + 2511 putative membrane protein - none -
fig|6666666.65929.peg.168 CDS gi|480756730|gb|AQUY01000003.1| 491 1465 2 + 975 Putative membrane protein - none -
fig|6666666.65929.peg.169 CDS gi|480756730|gb|AQUY01000003.1| 2804 1584 -2 - 1221 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65929.peg.170 CDS gi|480756730|gb|AQUY01000003.1| 3725 2880 -2 - 846 Putative transcriptional regulator - none -
fig|6666666.65929.peg.171 CDS gi|480756730|gb|AQUY01000003.1| 4127 5110 2 + 984 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65929.peg.172 CDS gi|480756730|gb|AQUY01000003.1| 5138 5797 2 + 660 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65929.peg.173 CDS gi|480756730|gb|AQUY01000003.1| 6179 5862 -2 - 318 predicted acetyltransferase - none -
fig|6666666.65929.peg.174 CDS gi|480756730|gb|AQUY01000003.1| 7247 8809 2 + 1563 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65929.peg.175 CDS gi|480756730|gb|AQUY01000003.1| 8823 9899 3 + 1077 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65929.peg.176 CDS gi|480756730|gb|AQUY01000003.1| 9908 11476 2 + 1569 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65929.peg.177 CDS gi|480756730|gb|AQUY01000003.1| 11473 13104 1 + 1632 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65929.peg.178 CDS gi|480756730|gb|AQUY01000003.1| 14524 13283 -1 - 1242 putative transport protein - none -
fig|6666666.65929.peg.179 CDS gi|480756730|gb|AQUY01000003.1| 14635 15795 1 + 1161 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.65929.peg.180 CDS gi|480756730|gb|AQUY01000003.1| 15900 16646 3 + 747 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65929.peg.181 CDS gi|480756730|gb|AQUY01000003.1| 17529 16753 -3 - 777 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65929.peg.182 CDS gi|480756730|gb|AQUY01000003.1| 18480 17560 -3 - 921 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65929.peg.183 CDS gi|480756730|gb|AQUY01000003.1| 19538 18495 -2 - 1044 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.65929.peg.184 CDS gi|480756730|gb|AQUY01000003.1| 20763 19651 -3 - 1113 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65929.peg.185 CDS gi|480756730|gb|AQUY01000003.1| 21920 20988 -2 - 933 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.65929.peg.186 CDS gi|480756730|gb|AQUY01000003.1| 21984 22805 3 + 822 hypothetical protein - none -
fig|6666666.65929.peg.187 CDS gi|480756730|gb|AQUY01000003.1| 22832 23497 2 + 666 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65929.peg.188 CDS gi|480756730|gb|AQUY01000003.1| 24361 23501 -1 - 861 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.65929.peg.189 CDS gi|480756730|gb|AQUY01000003.1| 24416 25576 2 + 1161 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.65929.peg.190 CDS gi|480756730|gb|AQUY01000003.1| 25825 26016 1 + 192 hypothetical protein - none -
fig|6666666.65929.peg.191 CDS gi|480756730|gb|AQUY01000003.1| 27239 26157 -2 - 1083 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.65929.peg.192 CDS gi|480756730|gb|AQUY01000003.1| 28798 27272 -1 - 1527 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.65929.peg.193 CDS gi|480756730|gb|AQUY01000003.1| 29624 28860 -2 - 765 hypothetical protein - none -
fig|6666666.65929.peg.194 CDS gi|480756730|gb|AQUY01000003.1| 30007 29633 -1 - 375 hypothetical protein - none -
fig|6666666.65929.peg.195 CDS gi|480756730|gb|AQUY01000003.1| 30166 31128 1 + 963 acyl-CoA hydrolase - none -
fig|6666666.65929.peg.196 CDS gi|480756730|gb|AQUY01000003.1| 31654 31178 -1 - 477 hypothetical membrane protein - none -
fig|6666666.65929.peg.197 CDS gi|480756730|gb|AQUY01000003.1| 31826 32713 2 + 888 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.65929.peg.198 CDS gi|480756730|gb|AQUY01000003.1| 33112 34203 1 + 1092 hypothetical protein - none -
fig|6666666.65929.peg.199 CDS gi|480756730|gb|AQUY01000003.1| 34200 34874 3 + 675 hypothetical protein - none -
fig|6666666.65929.peg.200 CDS gi|480756730|gb|AQUY01000003.1| 37305 34948 -3 - 2358 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65929.peg.201 CDS gi|480756730|gb|AQUY01000003.1| 38008 37337 -1 - 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65929.peg.202 CDS gi|480756730|gb|AQUY01000003.1| 38250 38005 -3 - 246 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.65929.peg.203 CDS gi|480756730|gb|AQUY01000003.1| 39001 38378 -1 - 624 FIG00546625: hypothetical protein - none -
fig|6666666.65929.peg.204 CDS gi|480756730|gb|AQUY01000003.1| 41237 39099 -2 - 2139 Protease II (EC 3.4.21.83) - none -
fig|6666666.65929.peg.205 CDS gi|480756730|gb|AQUY01000003.1| 42121 41234 -1 - 888 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.65929.peg.206 CDS gi|480756730|gb|AQUY01000003.1| 42322 43635 1 + 1314 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Biotin synthesis cluster;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65929.peg.207 CDS gi|480756730|gb|AQUY01000003.1| 43683 45029 3 + 1347 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.208 CDS gi|480756730|gb|AQUY01000003.1| 45037 45975 1 + 939 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.65929.peg.209 CDS gi|480756730|gb|AQUY01000003.1| 46894 46022 -1 - 873 hypothetical protein - none -
fig|6666666.65929.peg.210 CDS gi|480756730|gb|AQUY01000003.1| 47055 47396 3 + 342 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65929.peg.211 CDS gi|480756730|gb|AQUY01000003.1| 47637 49403 3 + 1767 Partial REP13E12 repeat protein - none -
fig|6666666.65929.peg.212 CDS gi|480756730|gb|AQUY01000003.1| 50973 49543 -3 - 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.65929.peg.213 CDS gi|480756730|gb|AQUY01000003.1| 52102 50987 -1 - 1116 uncharacterized membrane protein - none -
fig|6666666.65929.peg.214 CDS gi|480756730|gb|AQUY01000003.1| 54178 52214 -1 - 1965 hypothetical protein - none -
fig|6666666.65929.peg.215 CDS gi|480756730|gb|AQUY01000003.1| 54802 54248 -1 - 555 ABC transporter, ATP-binding protein - none -
fig|6666666.65929.peg.216 CDS gi|480756730|gb|AQUY01000003.1| 55492 54812 -1 - 681 ABC transporter, permease protein - none -
fig|6666666.65929.peg.217 CDS gi|480756730|gb|AQUY01000003.1| 56052 55612 -3 - 441 ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.218 CDS gi|480756730|gb|AQUY01000003.1| 56388 56882 3 + 495 hypothetical protein - none -
fig|6666666.65929.peg.219 CDS gi|480756730|gb|AQUY01000003.1| 56860 57561 1 + 702 hypothetical protein - none -
fig|6666666.65929.peg.220 CDS gi|480756730|gb|AQUY01000003.1| 57613 58248 1 + 636 putative two-component system response regulator - none -
fig|6666666.65929.peg.221 CDS gi|480756730|gb|AQUY01000003.1| 59584 58298 -1 - 1287 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.65929.peg.222 CDS gi|480756730|gb|AQUY01000003.1| 59625 60035 3 + 411 HIT family protein - none -
fig|6666666.65929.peg.223 CDS gi|480756730|gb|AQUY01000003.1| 60039 60878 3 + 840 Putative lipase - none -
fig|6666666.65929.peg.224 CDS gi|480756730|gb|AQUY01000003.1| 61136 61648 2 + 513 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Streptomyces coelicolor putative secreted lipase SCD63A.10c TR:Q9KY65 (EMBL:AL356832) (331 aa) fasta scores: E(): 0.00018, 31.3% id in 214 aa, and Streptomyces coelicolor putative lipase 2SCG18.12c TR:Q9K3H5 (EMBL:AL390188) (289 aa) fasta scores: E(): 0.00064, 28.94% id in 190 aa - none -
fig|6666666.65929.peg.225 CDS gi|480756730|gb|AQUY01000003.1| 62049 61645 -3 - 405 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.65929.peg.226 CDS gi|480756730|gb|AQUY01000003.1| 62321 63481 2 + 1161 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.65929.peg.227 CDS gi|480756730|gb|AQUY01000003.1| 63748 64119 1 + 372 Putative uncharacterized protein - none -
fig|6666666.65929.peg.228 CDS gi|480756730|gb|AQUY01000003.1| 64156 65619 1 + 1464 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.65929.peg.229 CDS gi|480756730|gb|AQUY01000003.1| 65624 66148 2 + 525 hypothetical protein - none -
fig|6666666.65929.peg.230 CDS gi|480756730|gb|AQUY01000003.1| 66707 66159 -2 - 549 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) - none -
fig|6666666.65929.peg.231 CDS gi|480756730|gb|AQUY01000003.1| 66782 67549 2 + 768 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.65929.peg.232 CDS gi|480756730|gb|AQUY01000003.1| 69288 67603 -3 - 1686 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.65929.peg.233 CDS gi|480756730|gb|AQUY01000003.1| 69514 70503 1 + 990 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.65929.peg.234 CDS gi|480756730|gb|AQUY01000003.1| 70533 72620 3 + 2088 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.65929.peg.235 CDS gi|480756730|gb|AQUY01000003.1| 72632 72904 2 + 273 Phosphocarrier protein of PTS system - none -
fig|6666666.65929.peg.236 CDS gi|480756730|gb|AQUY01000003.1| 73322 72999 -2 - 324 FIG00544339: hypothetical protein - none -
fig|6666666.65929.peg.237 CDS gi|480756730|gb|AQUY01000003.1| 73371 74753 3 + 1383 Histidine permease YuiF - none -
fig|6666666.65929.peg.238 CDS gi|480756730|gb|AQUY01000003.1| 76192 74882 -1 - 1311 Mu-like prophage protein gp29 - none -
fig|6666666.65929.peg.239 CDS gi|480756730|gb|AQUY01000003.1| 77001 76189 -3 - 813 DNA adenine methylase (EC 2.1.1.72) - none -
fig|6666666.65929.peg.240 CDS gi|480756730|gb|AQUY01000003.1| 78001 77021 -1 - 981 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.65929.peg.241 CDS gi|480756730|gb|AQUY01000003.1| 79447 78053 -1 - 1395 Cysteinyl-tRNA synthetase (EC 6.1.1.16) Zinc regulated enzymes;
tRNA aminoacylation, Cys
fig|6666666.65929.peg.242 CDS gi|480756730|gb|AQUY01000003.1| 79987 79502 -1 - 486 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65929.peg.243 CDS gi|480756730|gb|AQUY01000003.1| 80747 80031 -2 - 717 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.65929.peg.244 CDS gi|480756730|gb|AQUY01000003.1| 81330 80761 -3 - 570 CarD-like transcriptional regulator - none -
fig|6666666.65929.peg.245 CDS gi|480756730|gb|AQUY01000003.1| 81331 81471 1 + 141 hypothetical protein - none -
fig|6666666.65929.peg.246 CDS gi|480756730|gb|AQUY01000003.1| 81543 82205 3 + 663 hypothetical protein - none -
fig|6666666.65929.peg.247 CDS gi|480756730|gb|AQUY01000003.1| 82282 83712 1 + 1431 DNA repair protein RadA A DNA integrity scanning protein that co-occurs with RadA;
DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65929.peg.248 CDS gi|480756730|gb|AQUY01000003.1| 83792 84889 2 + 1098 DNA integrity scanning protein DisA A DNA integrity scanning protein that co-occurs with RadA
fig|6666666.65929.peg.249 CDS gi|480756730|gb|AQUY01000003.1| 85615 84920 -1 - 696 hypothetical protein - none -
fig|6666666.65929.peg.250 CDS gi|480756730|gb|AQUY01000003.1| 86322 85666 -3 - 657 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.65929.peg.251 CDS gi|480756730|gb|AQUY01000003.1| 86373 87287 3 + 915 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.65929.peg.252 CDS gi|480756730|gb|AQUY01000003.1| 87471 87301 -3 - 171 FIG00543978: hypothetical protein - none -
fig|6666666.65929.peg.253 CDS gi|480756730|gb|AQUY01000003.1| 90238 87581 -1 - 2658 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.65929.peg.254 CDS gi|480756730|gb|AQUY01000003.1| 91945 90392 -1 - 1554 hypothetical protein - none -
fig|6666666.65929.peg.255 CDS gi|480756730|gb|AQUY01000003.1| 93642 92062 -3 - 1581 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.65929.peg.256 CDS gi|480756730|gb|AQUY01000003.1| 93916 96042 1 + 2127 Putative phosphatase - none -
fig|6666666.65929.peg.257 CDS gi|480756730|gb|AQUY01000003.1| 96717 96598 -3 - 120 hypothetical protein - none -
fig|6666666.65929.peg.258 CDS gi|480756730|gb|AQUY01000003.1| 97084 96680 -1 - 405 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65929.peg.259 CDS gi|480756730|gb|AQUY01000003.1| 97972 97085 -1 - 888 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65929.peg.260 CDS gi|480756730|gb|AQUY01000003.1| 98953 98039 -1 - 915 Ketopantoate reductase PanG (EC 1.1.1.169) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.65929.peg.261 CDS gi|480756730|gb|AQUY01000003.1| 100373 98955 -2 - 1419 Possible membrane protein - none -
fig|6666666.65929.peg.262 CDS gi|480756730|gb|AQUY01000003.1| 100341 100514 3 + 174 hypothetical protein - none -
fig|6666666.65929.peg.263 CDS gi|480756730|gb|AQUY01000003.1| 101043 100543 -3 - 501 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.65929.peg.264 CDS gi|480756730|gb|AQUY01000003.1| 101621 101040 -2 - 582 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65929.peg.265 CDS gi|480756730|gb|AQUY01000003.1| 102049 101621 -1 - 429 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65929.peg.266 CDS gi|480756730|gb|AQUY01000003.1| 103059 102103 -3 - 957 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.65929.peg.267 CDS gi|480756730|gb|AQUY01000003.1| 103641 103063 -3 - 579 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65929.peg.268 CDS gi|480756730|gb|AQUY01000003.1| 106027 103628 -1 - 2400 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.65929.peg.269 CDS gi|480756730|gb|AQUY01000003.1| 106692 106111 -3 - 582 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.65929.peg.270 CDS gi|480756730|gb|AQUY01000003.1| 107752 106685 -1 - 1068 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.65929.peg.271 CDS gi|480756730|gb|AQUY01000003.1| 109095 107752 -3 - 1344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.272 CDS gi|480756730|gb|AQUY01000003.1| 109264 109746 1 + 483 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.65929.peg.273 CDS gi|480756730|gb|AQUY01000003.1| 109759 110055 1 + 297 rhodanese-related sulfurtransferase - none -
fig|6666666.65929.peg.274 CDS gi|480756730|gb|AQUY01000003.1| 110139 110633 3 + 495 Transcriptional regulator, MarR family - none -
fig|6666666.65929.peg.275 CDS gi|480756730|gb|AQUY01000003.1| 110630 114586 2 + 3957 putative non-ribosomal peptide synthetase - none -
fig|6666666.65929.peg.276 CDS gi|480756730|gb|AQUY01000003.1| 116100 118880 3 + 2781 hypothetical protein - none -
fig|6666666.65929.peg.277 CDS gi|480756730|gb|AQUY01000003.1| 120051 119152 -3 - 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.65929.peg.278 CDS gi|480756730|gb|AQUY01000003.1| 120645 120460 -3 - 186 hypothetical protein - none -
fig|6666666.65929.peg.279 CDS gi|480756730|gb|AQUY01000003.1| 120855 120685 -3 - 171 hypothetical protein - none -
fig|6666666.65929.peg.280 CDS gi|480756730|gb|AQUY01000003.1| 121640 121449 -2 - 192 hypothetical protein - none -
fig|6666666.65929.peg.281 CDS gi|480756730|gb|AQUY01000003.1| 123713 122091 -2 - 1623 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65929.peg.282 CDS gi|480756730|gb|AQUY01000003.1| 124781 123861 -2 - 921 hypothetical protein - none -
fig|6666666.65929.peg.283 CDS gi|480756730|gb|AQUY01000003.1| 125527 124805 -1 - 723 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.-) Valine degradation
fig|6666666.65929.peg.284 CDS gi|480756730|gb|AQUY01000003.1| 125993 125589 -2 - 405 hypothetical protein - none -
fig|6666666.65929.peg.285 CDS gi|480756730|gb|AQUY01000003.1| 126031 127470 1 + 1440 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.65929.peg.286 CDS gi|480756730|gb|AQUY01000003.1| 127648 128190 1 + 543 Acetyl-CoA acetyltransferase - none -
fig|6666666.65929.peg.287 CDS gi|480756730|gb|AQUY01000003.1| 128239 131478 1 + 3240 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65929.peg.288 CDS gi|480756730|gb|AQUY01000003.1| 131485 131970 1 + 486 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65929.peg.289 CDS gi|480756730|gb|AQUY01000003.1| 131971 133710 1 + 1740 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65929.peg.290 CDS gi|480756730|gb|AQUY01000003.1| 133700 134212 2 + 513 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65929.peg.291 CDS gi|480756730|gb|AQUY01000003.1| 134205 134699 3 + 495 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.65929.peg.292 CDS gi|480756730|gb|AQUY01000003.1| 134726 135109 2 + 384 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.65929.peg.293 CDS gi|480756730|gb|AQUY01000003.1| 136335 135115 -3 - 1221 Putative cytoplasmic protein - none -
fig|6666666.65929.peg.294 CDS gi|480756730|gb|AQUY01000003.1| 136982 136338 -2 - 645 hypothetical protein - none -
fig|6666666.65929.peg.295 CDS gi|480756730|gb|AQUY01000003.1| 137896 137060 -1 - 837 hypothetical protein - none -
fig|6666666.65929.peg.296 CDS gi|480756730|gb|AQUY01000003.1| 138104 139294 2 + 1191 hypothetical protein - none -
fig|6666666.65929.peg.297 CDS gi|480756730|gb|AQUY01000003.1| 140075 141781 2 + 1707 hypothetical protein - none -
fig|6666666.65929.peg.298 CDS gi|480756730|gb|AQUY01000003.1| 142140 141919 -3 - 222 hypothetical protein - none -
fig|6666666.65929.peg.299 CDS gi|480756730|gb|AQUY01000003.1| 142373 142224 -2 - 150 hypothetical protein - none -
fig|6666666.65929.peg.300 CDS gi|480756730|gb|AQUY01000003.1| 142329 143030 3 + 702 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65929.peg.301 CDS gi|480756730|gb|AQUY01000003.1| 143035 144195 1 + 1161 histone acetyltransferase HPA2-like protein - none -
fig|6666666.65929.peg.302 CDS gi|480756730|gb|AQUY01000003.1| 144986 144288 -2 - 699 hypothetical protein - none -
fig|6666666.65929.peg.303 CDS gi|480756730|gb|AQUY01000003.1| 145101 145970 3 + 870 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65929.peg.304 CDS gi|480756730|gb|AQUY01000003.1| 146135 146653 2 + 519 putative transcriptional regulator (MarR family) - none -
fig|6666666.65929.peg.305 CDS gi|480756730|gb|AQUY01000003.1| 147709 146843 -1 - 867 Putative ABC transport system membrane protein - none -
fig|6666666.65929.peg.306 CDS gi|480756730|gb|AQUY01000003.1| 148749 147709 -3 - 1041 putative ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.307 CDS gi|480756730|gb|AQUY01000003.1| 149285 148818 -2 - 468 mutT3 - none -
fig|6666666.65929.peg.308 CDS gi|480756730|gb|AQUY01000003.1| 149405 150850 2 + 1446 POSSIBLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.309 CDS gi|480756730|gb|AQUY01000003.1| 150850 151887 1 + 1038 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.65929.peg.310 CDS gi|480756730|gb|AQUY01000003.1| 151880 154786 2 + 2907 serine/threonine protein kinase - none -
fig|6666666.65929.peg.311 CDS gi|480756730|gb|AQUY01000003.1| 154873 155634 1 + 762 Putative secreted protein - none -
fig|6666666.65929.peg.312 CDS gi|480756730|gb|AQUY01000003.1| 156963 155764 -3 - 1200 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.313 CDS gi|480756730|gb|AQUY01000003.1| 158446 156965 -1 - 1482 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.314 CDS gi|480756730|gb|AQUY01000003.1| 158794 160200 1 + 1407 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) - none -
fig|6666666.65929.peg.315 CDS gi|480756730|gb|AQUY01000003.1| 162011 160332 -2 - 1680 hypothetical protein - none -
fig|6666666.65929.peg.316 CDS gi|480756730|gb|AQUY01000003.1| 164557 162620 -1 - 1938 hypothetical protein - none -
fig|6666666.65929.peg.317 CDS gi|480756730|gb|AQUY01000003.1| 166470 165151 -3 - 1320 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.65929.peg.318 CDS gi|480756730|gb|AQUY01000003.1| 166531 167394 1 + 864 hypothetical protein - none -
fig|6666666.65929.peg.319 CDS gi|480756730|gb|AQUY01000003.1| 167818 167420 -1 - 399 hypothetical protein - none -
fig|6666666.65929.peg.320 CDS gi|480756730|gb|AQUY01000003.1| 169041 168004 -3 - 1038 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.65929.peg.321 CDS gi|480756730|gb|AQUY01000003.1| 170296 169097 -1 - 1200 fructose-bisphosphate aldolase family protein - none -
fig|6666666.65929.peg.322 CDS gi|480756730|gb|AQUY01000003.1| 171148 170402 -1 - 747 probable RNA methyltransferase - none -
fig|6666666.65929.peg.323 CDS gi|480756730|gb|AQUY01000003.1| 171702 171145 -3 - 558 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.65929.peg.324 CDS gi|480756730|gb|AQUY01000003.1| 173482 171680 -1 - 1803 hypothetical protein - none -
fig|6666666.65929.peg.325 CDS gi|480756730|gb|AQUY01000003.1| 174332 173499 -2 - 834 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65929.peg.326 CDS gi|480756730|gb|AQUY01000003.1| 174821 174438 -2 - 384 hypothetical protein - none -
fig|6666666.65929.peg.327 CDS gi|480756730|gb|AQUY01000003.1| 178020 175444 -3 - 2577 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.65929.peg.328 CDS gi|480756730|gb|AQUY01000003.1| 178269 179036 3 + 768 hypothetical protein - none -
fig|6666666.65929.peg.329 CDS gi|480756730|gb|AQUY01000003.1| 179839 179033 -1 - 807 Aliphatic amidase AmiE (EC 3.5.1.4) - none -
fig|6666666.65929.peg.330 CDS gi|480756730|gb|AQUY01000003.1| 179955 180260 3 + 306 hypothetical protein - none -
fig|6666666.65929.peg.331 CDS gi|480756730|gb|AQUY01000003.1| 180266 181816 2 + 1551 hypothetical protein - none -
fig|6666666.65929.peg.332 CDS gi|480756730|gb|AQUY01000003.1| 182328 181900 -3 - 429 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65929.peg.333 CDS gi|480756730|gb|AQUY01000003.1| 183594 182374 -3 - 1221 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65929.peg.334 CDS gi|480756730|gb|AQUY01000003.1| 184311 183682 -3 - 630 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65929.peg.335 CDS gi|480756730|gb|AQUY01000003.1| 186162 184312 -3 - 1851 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65929.peg.336 CDS gi|480756730|gb|AQUY01000003.1| 186492 186373 -3 - 120 hypothetical protein - none -
fig|6666666.65929.peg.337 CDS gi|480756730|gb|AQUY01000003.1| 188281 186908 -1 - 1374 FIG00549883: hypothetical protein - none -
fig|6666666.65929.peg.338 CDS gi|480756730|gb|AQUY01000003.1| 189189 188395 -3 - 795 predicted metal-dependent hydrolase - none -
fig|6666666.65929.peg.339 CDS gi|480756730|gb|AQUY01000003.1| 189349 192399 1 + 3051 Fe-S oxidoreductase - none -
fig|6666666.65929.peg.340 CDS gi|480756730|gb|AQUY01000003.1| 192690 193049 3 + 360 hypothetical protein - none -
fig|6666666.65929.peg.341 CDS gi|480756730|gb|AQUY01000003.1| 193137 194411 3 + 1275 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65929.peg.342 CDS gi|480756730|gb|AQUY01000003.1| 194521 195849 1 + 1329 hypothetical protein - none -
fig|6666666.65929.peg.343 CDS gi|480756730|gb|AQUY01000003.1| 199156 195932 -1 - 3225 hypothetical protein - none -
fig|6666666.65929.peg.344 CDS gi|480756730|gb|AQUY01000003.1| 200003 199425 -2 - 579 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) - none -
fig|6666666.65929.peg.345 CDS gi|480756730|gb|AQUY01000003.1| 201622 200183 -1 - 1440 hypothetical protein - none -
fig|6666666.65929.peg.346 CDS gi|480756730|gb|AQUY01000003.1| 203328 201628 -3 - 1701 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.65929.peg.347 CDS gi|480756730|gb|AQUY01000003.1| 203436 203912 3 + 477 FIG00545938: hypothetical protein - none -
fig|6666666.65929.peg.348 CDS gi|480756730|gb|AQUY01000003.1| 203924 204118 2 + 195 hypothetical protein - none -
fig|6666666.65929.peg.349 CDS gi|480756730|gb|AQUY01000003.1| 204125 207823 2 + 3699 Conserved putative integral membrane protein - none -
fig|6666666.65929.peg.350 CDS gi|480756730|gb|AQUY01000003.1| 208872 210023 3 + 1152 hypothetical protein - none -
fig|6666666.65929.peg.351 CDS gi|480756730|gb|AQUY01000003.1| 210115 211857 1 + 1743 hypothetical protein - none -
fig|6666666.65929.peg.352 CDS gi|480756730|gb|AQUY01000003.1| 212970 213755 3 + 786 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.65929.peg.353 CDS gi|480756730|gb|AQUY01000003.1| 213904 215154 1 + 1251 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Biotin synthesis cluster;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65929.peg.354 CDS gi|480756730|gb|AQUY01000003.1| 215223 217442 3 + 2220 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Valine degradation
fig|6666666.65929.peg.355 CDS gi|480756730|gb|AQUY01000003.1| 217625 218278 2 + 654 hypothetical membrane protein - none -
fig|6666666.65929.peg.356 CDS gi|480756730|gb|AQUY01000003.1| 218327 218578 2 + 252 hypothetical protein - none -
fig|6666666.65929.peg.357 CDS gi|480756730|gb|AQUY01000003.1| 220242 218623 -3 - 1620 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.65929.peg.358 CDS gi|480756730|gb|AQUY01000003.1| 222386 220560 -2 - 1827 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65929.peg.359 CDS gi|480756730|gb|AQUY01000003.1| 222928 222554 -1 - 375 hypothetical protein - none -
fig|6666666.65929.peg.360 CDS gi|480756730|gb|AQUY01000003.1| 224030 222921 -2 - 1110 hypothetical protein - none -
fig|6666666.65929.peg.361 CDS gi|480756730|gb|AQUY01000003.1| 224458 224018 -1 - 441 hypothetical protein - none -
fig|6666666.65929.peg.362 CDS gi|480756730|gb|AQUY01000003.1| 224460 225425 3 + 966 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.65929.peg.363 CDS gi|480756730|gb|AQUY01000003.1| 225543 226259 3 + 717 hypothetical protein - none -
fig|6666666.65929.peg.364 CDS gi|480756730|gb|AQUY01000003.1| 226263 228539 3 + 2277 putative integral membrane protein - none -
fig|6666666.65929.peg.365 CDS gi|480756730|gb|AQUY01000003.1| 228568 229629 1 + 1062 probable integral membrane protein - none -
fig|6666666.65929.peg.366 CDS gi|480756730|gb|AQUY01000003.1| 229647 230042 3 + 396 hypothetical protein - none -
fig|6666666.65929.peg.367 CDS gi|480756730|gb|AQUY01000003.1| 230067 231416 3 + 1350 Probable conserved integral membrane protein - none -
fig|6666666.65929.peg.368 CDS gi|480756730|gb|AQUY01000003.1| 231714 231586 -3 - 129 hypothetical protein - none -
fig|6666666.65929.peg.369 CDS gi|480756730|gb|AQUY01000003.1| 233767 232217 -1 - 1551 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65929.peg.370 CDS gi|480756730|gb|AQUY01000003.1| 238765 233774 -1 - 4992 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.371 CDS gi|480756730|gb|AQUY01000003.1| 240628 238793 -1 - 1836 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.372 CDS gi|480756730|gb|AQUY01000003.1| 241751 240843 -2 - 909 hypothetical protein Rv3802c - none -
fig|6666666.65929.peg.373 CDS gi|480756730|gb|AQUY01000003.1| 242290 241775 -1 - 516 hypothetical protein - none -
fig|6666666.65929.peg.374 CDS gi|480756730|gb|AQUY01000003.1| 244275 242290 -3 - 1986 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65929.peg.375 CDS gi|480756730|gb|AQUY01000003.1| 244276 244473 1 + 198 hypothetical protein - none -
fig|6666666.65929.peg.376 CDS gi|480756730|gb|AQUY01000003.1| 245693 244671 -2 - 1023 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65929.peg.377 CDS gi|480756730|gb|AQUY01000003.1| 247931 245955 -2 - 1977 hypothetical protein Rv3805c - none -
fig|6666666.65929.peg.378 CDS gi|480756730|gb|AQUY01000003.1| 249020 247977 -2 - 1044 putative membrane protein - none -
fig|6666666.65929.peg.379 CDS gi|480756730|gb|AQUY01000003.1| 249586 249017 -1 - 570 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.65929.peg.380 CDS gi|480756730|gb|AQUY01000003.1| 251564 249576 -2 - 1989 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.65929.peg.381 CDS gi|480756730|gb|AQUY01000003.1| 252954 251731 -3 - 1224 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.65929.peg.382 CDS gi|480756730|gb|AQUY01000003.1| 253186 255297 1 + 2112 FIG00544841: hypothetical protein - none -
fig|6666666.65929.peg.383 CDS gi|480756730|gb|AQUY01000003.1| 256223 255399 -2 - 825 Putative uncharacterized protein BCG_3875c - none -
fig|6666666.65929.peg.384 CDS gi|480756730|gb|AQUY01000003.1| 257107 256229 -1 - 879 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.385 CDS gi|480756730|gb|AQUY01000003.1| 258366 257104 -3 - 1263 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.65929.peg.386 CDS gi|480756730|gb|AQUY01000003.1| 259029 258376 -3 - 654 Threonine efflux protein - none -
fig|6666666.65929.peg.387 CDS gi|480756730|gb|AQUY01000003.1| 259177 260268 1 + 1092 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.388 CDS gi|480756730|gb|AQUY01000003.1| 260288 260635 2 + 348 hypothetical protein - none -
fig|6666666.65929.peg.389 CDS gi|480756730|gb|AQUY01000003.1| 260835 260999 3 + 165 hypothetical protein - none -
fig|6666666.65929.peg.390 CDS gi|480756730|gb|AQUY01000003.1| 261712 260996 -1 - 717 putative phosphoglycerate mutase - none -
fig|6666666.65929.peg.391 CDS gi|480756730|gb|AQUY01000003.1| 262652 261717 -2 - 936 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65929.peg.392 CDS gi|480756730|gb|AQUY01000003.1| 262751 263986 2 + 1236 putative amidase - none -
fig|6666666.65929.peg.393 CDS gi|480756730|gb|AQUY01000003.1| 263983 264741 1 + 759 Putative conserved integral membrane protein - none -
fig|6666666.65929.peg.394 CDS gi|480756730|gb|AQUY01000003.1| 264738 266027 3 + 1290 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65929.peg.395 CDS gi|480756730|gb|AQUY01000003.1| 266978 266049 -2 - 930 hypothetical protein - none -
fig|6666666.65929.peg.396 CDS gi|480756730|gb|AQUY01000003.1| 267718 266984 -1 - 735 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65929.peg.397 CDS gi|480756730|gb|AQUY01000003.1| 268314 267772 -3 - 543 hypothetical protein - none -
fig|6666666.65929.peg.398 CDS gi|480756730|gb|AQUY01000003.1| 270350 268398 -2 - 1953 Pyruvate kinase family protein - none -
fig|6666666.65929.peg.399 CDS gi|480756730|gb|AQUY01000003.1| 271447 270479 -1 - 969 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.65929.peg.400 CDS gi|480756730|gb|AQUY01000003.1| 271660 273357 1 + 1698 Predicted membrane protein (DUF2319) - none -
fig|6666666.65929.peg.401 CDS gi|480756730|gb|AQUY01000003.1| 273479 273664 2 + 186 hypothetical protein - none -
fig|6666666.65929.peg.402 CDS gi|480756730|gb|AQUY01000003.1| 273714 273881 3 + 168 hypothetical protein - none -
fig|6666666.65929.peg.403 CDS gi|480756730|gb|AQUY01000003.1| 274022 274513 2 + 492 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.65929.peg.404 CDS gi|480756730|gb|AQUY01000003.1| 274510 275226 1 + 717 ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.405 CDS gi|480756730|gb|AQUY01000003.1| 275223 277460 3 + 2238 hypothetical protein - none -
fig|6666666.65929.peg.406 CDS gi|480756730|gb|AQUY01000003.1| 278092 277457 -1 - 636 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.65929.peg.407 CDS gi|480756730|gb|AQUY01000003.1| 278243 278845 2 + 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.65929.peg.408 CDS gi|480756730|gb|AQUY01000003.1| 280535 278940 -2 - 1596 FIG00544355: hypothetical protein - none -
fig|6666666.65929.peg.409 CDS gi|480756730|gb|AQUY01000003.1| 280603 281352 1 + 750 FIG071084: hypothetical protein - none -
fig|6666666.65929.peg.410 CDS gi|480756730|gb|AQUY01000003.1| 281512 283176 1 + 1665 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.65929.peg.411 CDS gi|480756730|gb|AQUY01000003.1| 283265 283621 2 + 357 Histone protein Lsr2 - none -
fig|6666666.65929.peg.412 CDS gi|480756730|gb|AQUY01000003.1| 283743 285077 3 + 1335 hypothetical protein - none -
fig|6666666.65929.peg.413 CDS gi|480756730|gb|AQUY01000003.1| 285740 285099 -2 - 642 Transcriptional regulator, TetR family - none -
fig|6666666.65929.peg.414 CDS gi|480756730|gb|AQUY01000003.1| 286200 285931 -3 - 270 hypothetical protein - none -
fig|6666666.65929.peg.415 CDS gi|480756730|gb|AQUY01000003.1| 287348 286431 -2 - 918 Universal stress protein family - none -
fig|6666666.65929.peg.416 CDS gi|480756730|gb|AQUY01000003.1| 287591 287457 -2 - 135 hypothetical protein - none -
fig|6666666.65929.peg.417 CDS gi|480756730|gb|AQUY01000003.1| 287686 288633 1 + 948 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65929.peg.418 CDS gi|480756730|gb|AQUY01000003.1| 288673 289440 1 + 768 putative ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.419 CDS gi|480756730|gb|AQUY01000003.1| 289468 292056 1 + 2589 ABC-type transporter, permease component - none -
fig|6666666.65929.peg.420 CDS gi|480756730|gb|AQUY01000003.1| 292578 292081 -3 - 498 hypothetical protein - none -
fig|6666666.65929.peg.421 CDS gi|480756736|gb|AQUY01000002.1| 369 1133 3 + 765 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65929.peg.422 CDS gi|480756736|gb|AQUY01000002.1| 1158 2393 3 + 1236 hypothetical protein - none -
fig|6666666.65929.peg.423 CDS gi|480756736|gb|AQUY01000002.1| 3055 2411 -1 - 645 hypothetical protein - none -
fig|6666666.65929.peg.424 CDS gi|480756736|gb|AQUY01000002.1| 4834 3113 -1 - 1722 DNA repair helicase - none -
fig|6666666.65929.peg.425 CDS gi|480756736|gb|AQUY01000002.1| 5097 6257 3 + 1161 FIG00545033: hypothetical protein - none -
fig|6666666.65929.peg.426 CDS gi|480756736|gb|AQUY01000002.1| 6270 7058 3 + 789 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase CBSS-279010.5.peg.587
fig|6666666.65929.peg.427 CDS gi|480756736|gb|AQUY01000002.1| 7703 7062 -2 - 642 Transcriptional regulator, GntR family - none -
fig|6666666.65929.peg.428 CDS gi|480756736|gb|AQUY01000002.1| 9531 7735 -3 - 1797 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.429 CDS gi|480756736|gb|AQUY01000002.1| 11255 9528 -2 - 1728 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) CBSS-279010.5.peg.587;
CBSS-279010.5.peg.587;
EC699-706;
EC699-706
fig|6666666.65929.peg.430 CDS gi|480756736|gb|AQUY01000002.1| 12025 11252 -1 - 774 Lactam utilization protein LamB CBSS-279010.5.peg.587;
EC699-706
fig|6666666.65929.peg.431 CDS gi|480756736|gb|AQUY01000002.1| 14393 12150 -2 - 2244 probable DNA-binding protein - none -
fig|6666666.65929.peg.432 CDS gi|480756736|gb|AQUY01000002.1| 14584 14787 1 + 204 hypothetical protein - none -
fig|6666666.65929.peg.433 CDS gi|480756736|gb|AQUY01000002.1| 15584 14991 -2 - 594 FIG00996461: hypothetical protein - none -
fig|6666666.65929.peg.434 CDS gi|480756736|gb|AQUY01000002.1| 15736 15608 -1 - 129 hypothetical protein - none -
fig|6666666.65929.peg.435 CDS gi|480756736|gb|AQUY01000002.1| 16244 16630 2 + 387 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.65929.peg.436 CDS gi|480756736|gb|AQUY01000002.1| 17190 16669 -3 - 522 hypothetical protein - none -
fig|6666666.65929.peg.437 CDS gi|480756736|gb|AQUY01000002.1| 18103 17225 -1 - 879 glutamine cyclotransferase - none -
fig|6666666.65929.peg.438 CDS gi|480756736|gb|AQUY01000002.1| 18153 18830 3 + 678 FIG00546806: hypothetical protein - none -
fig|6666666.65929.peg.439 CDS gi|480756736|gb|AQUY01000002.1| 19142 18852 -2 - 291 hypothetical protein - none -
fig|6666666.65929.peg.440 CDS gi|480756736|gb|AQUY01000002.1| 19222 20712 1 + 1491 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.65929.peg.441 CDS gi|480756736|gb|AQUY01000002.1| 20750 21598 2 + 849 putative rRNA methylase - none -
fig|6666666.65929.peg.442 CDS gi|480756736|gb|AQUY01000002.1| 22461 21571 -3 - 891 hypothetical protein - none -
fig|6666666.65929.peg.443 CDS gi|480756736|gb|AQUY01000002.1| 23619 22480 -3 - 1140 hypothetical protein - none -
fig|6666666.65929.peg.444 CDS gi|480756736|gb|AQUY01000002.1| 24859 23726 -1 - 1134 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65929.peg.445 CDS gi|480756736|gb|AQUY01000002.1| 24824 24961 2 + 138 hypothetical protein - none -
fig|6666666.65929.peg.446 CDS gi|480756736|gb|AQUY01000002.1| 25368 24958 -3 - 411 hypothetical protein - none -
fig|6666666.65929.peg.447 CDS gi|480756736|gb|AQUY01000002.1| 26225 27463 2 + 1239 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65929.peg.448 CDS gi|480756736|gb|AQUY01000002.1| 27614 27925 2 + 312 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.65929.peg.449 CDS gi|480756736|gb|AQUY01000002.1| 29252 28032 -2 - 1221 possible ABC transporter, permease component - none -
fig|6666666.65929.peg.450 CDS gi|480756736|gb|AQUY01000002.1| 30016 29249 -1 - 768 ABC transporter, ATP-binding protein - none -
fig|6666666.65929.peg.451 CDS gi|480756736|gb|AQUY01000002.1| 30380 31987 2 + 1608 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65929.peg.452 CDS gi|480756736|gb|AQUY01000002.1| 32022 32870 3 + 849 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.65929.peg.453 CDS gi|480756736|gb|AQUY01000002.1| 32961 33722 3 + 762 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Valine degradation
fig|6666666.65929.peg.454 CDS gi|480756736|gb|AQUY01000002.1| 34211 34498 2 + 288 hypothetical protein - none -
fig|6666666.65929.peg.455 CDS gi|480756736|gb|AQUY01000002.1| 34502 36154 2 + 1653 putative transport protein - none -
fig|6666666.65929.peg.456 CDS gi|480756736|gb|AQUY01000002.1| 36283 39219 1 + 2937 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65929.peg.457 CDS gi|480756736|gb|AQUY01000002.1| 39230 40426 2 + 1197 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65929.peg.458 CDS gi|480756736|gb|AQUY01000002.1| 40482 40871 3 + 390 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.65929.peg.459 CDS gi|480756736|gb|AQUY01000002.1| 42231 40915 -3 - 1317 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65929.peg.460 CDS gi|480756736|gb|AQUY01000002.1| 43329 42319 -3 - 1011 Putative secreted protein - none -
fig|6666666.65929.peg.461 CDS gi|480756736|gb|AQUY01000002.1| 45160 43439 -1 - 1722 FIG00548821: hypothetical protein - none -
fig|6666666.65929.peg.462 CDS gi|480756736|gb|AQUY01000002.1| 46529 45312 -2 - 1218 Nucleoside permease NupC - none -
fig|6666666.65929.peg.463 CDS gi|480756736|gb|AQUY01000002.1| 46822 46577 -1 - 246 Cytidine deaminase (EC 3.5.4.5) - none -
fig|6666666.65929.peg.464 CDS gi|480756736|gb|AQUY01000002.1| 47042 46803 -2 - 240 Cytidine deaminase (EC 3.5.4.5) - none -
fig|6666666.65929.peg.465 CDS gi|480756736|gb|AQUY01000002.1| 47233 48519 1 + 1287 Thymidine phosphorylase (EC 2.4.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65929.peg.466 CDS gi|480756736|gb|AQUY01000002.1| 49828 48569 -1 - 1260 hypothetical protein - none -
fig|6666666.65929.peg.467 CDS gi|480756736|gb|AQUY01000002.1| 50038 50913 1 + 876 Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10) Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.468 CDS gi|480756736|gb|AQUY01000002.1| 52658 50919 -2 - 1740 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.469 CDS gi|480756736|gb|AQUY01000002.1| 53787 52936 -3 - 852 Far-related protein - none -
fig|6666666.65929.peg.470 CDS gi|480756736|gb|AQUY01000002.1| 54068 53874 -2 - 195 hypothetical protein - none -
fig|6666666.65929.peg.471 CDS gi|480756736|gb|AQUY01000002.1| 54458 54174 -2 - 285 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65929.peg.472 CDS gi|480756736|gb|AQUY01000002.1| 54765 54469 -3 - 297 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.65929.peg.473 CDS gi|480756736|gb|AQUY01000002.1| 55307 54762 -2 - 546 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.65929.peg.474 CDS gi|480756736|gb|AQUY01000002.1| 56110 55304 -1 - 807 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.65929.peg.475 CDS gi|480756736|gb|AQUY01000002.1| 56219 56461 2 + 243 hypothetical protein - none -
fig|6666666.65929.peg.476 CDS gi|480756736|gb|AQUY01000002.1| 56663 56535 -2 - 129 hypothetical protein - none -
fig|6666666.65929.peg.477 CDS gi|480756736|gb|AQUY01000002.1| 56664 57104 3 + 441 Cell filamentation protein fic - none -
fig|6666666.65929.peg.478 CDS gi|480756736|gb|AQUY01000002.1| 57772 57101 -1 - 672 DNA alkylation repair enzyme - none -
fig|6666666.65929.peg.479 CDS gi|480756736|gb|AQUY01000002.1| 58523 57777 -2 - 747 inositol monophosphatase family protein - none -
fig|6666666.65929.peg.480 CDS gi|480756736|gb|AQUY01000002.1| 60251 58608 -2 - 1644 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.65929.peg.481 CDS gi|480756736|gb|AQUY01000002.1| 60355 61866 1 + 1512 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.65929.peg.482 CDS gi|480756736|gb|AQUY01000002.1| 62194 61901 -1 - 294 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.65929.peg.483 CDS gi|480756736|gb|AQUY01000002.1| 62273 64735 2 + 2463 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.65929.peg.484 CDS gi|480756736|gb|AQUY01000002.1| 66235 64739 -1 - 1497 Transcriptional regulator, XRE family - none -
fig|6666666.65929.peg.485 CDS gi|480756736|gb|AQUY01000002.1| 66436 67944 1 + 1509 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65929.peg.486 CDS gi|480756736|gb|AQUY01000002.1| 67944 68849 3 + 906 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65929.peg.487 CDS gi|480756736|gb|AQUY01000002.1| 68866 70011 1 + 1146 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.65929.peg.488 CDS gi|480756736|gb|AQUY01000002.1| 70914 70186 -3 - 729 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.65929.peg.489 CDS gi|480756736|gb|AQUY01000002.1| 71293 72921 1 + 1629 FIG021574: Possible membrane protein related to de Novo purine biosynthesis A hypothetical coupled to de Novo Purine Biosynthesis
fig|6666666.65929.peg.490 CDS gi|480756736|gb|AQUY01000002.1| 72926 73630 2 + 705 ThiJ/PfpI family protein - none -
fig|6666666.65929.peg.491 CDS gi|480756736|gb|AQUY01000002.1| 73641 74261 3 + 621 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65929.peg.492 CDS gi|480756736|gb|AQUY01000002.1| 74261 75853 2 + 1593 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.65929.peg.493 CDS gi|480756736|gb|AQUY01000002.1| 75929 76879 2 + 951 Deoxyribonucleoside regulator DeoR (transcriptional repressor) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65929.peg.494 CDS gi|480756736|gb|AQUY01000002.1| 76997 77713 2 + 717 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.65929.peg.495 CDS gi|480756736|gb|AQUY01000002.1| 77718 79148 3 + 1431 Similar to tetracycline resistance protein - none -
fig|6666666.65929.peg.496 CDS gi|480756736|gb|AQUY01000002.1| 79200 79853 3 + 654 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65929.peg.497 CDS gi|480756736|gb|AQUY01000002.1| 79854 81557 3 + 1704 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65929.peg.498 CDS gi|480756736|gb|AQUY01000002.1| 81980 83437 2 + 1458 ATP-dependent DNA helicase - none -
fig|6666666.65929.peg.499 CDS gi|480756736|gb|AQUY01000002.1| 83661 85334 3 + 1674 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65929.peg.500 CDS gi|480756736|gb|AQUY01000002.1| 85331 86464 2 + 1134 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65929.peg.501 CDS gi|480756736|gb|AQUY01000002.1| 86879 87118 2 + 240 hypothetical protein - none -
fig|6666666.65929.peg.502 CDS gi|480756736|gb|AQUY01000002.1| 87416 90934 2 + 3519 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65929.peg.503 CDS gi|480756736|gb|AQUY01000002.1| 91137 91730 3 + 594 Transcriptional regulator, TetR family - none -
fig|6666666.65929.peg.504 CDS gi|480756736|gb|AQUY01000002.1| 91929 93527 3 + 1599 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Serine-glyoxylate cycle
fig|6666666.65929.peg.505 CDS gi|480756736|gb|AQUY01000002.1| 93558 95591 3 + 2034 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Serine-glyoxylate cycle
fig|6666666.65929.peg.506 CDS gi|480756736|gb|AQUY01000002.1| 95651 96808 2 + 1158 Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) - none -
fig|6666666.65929.peg.507 CDS gi|480756736|gb|AQUY01000002.1| 96812 97375 2 + 564 Oxidase regulatory-related protein - none -
fig|6666666.65929.peg.508 CDS gi|480756736|gb|AQUY01000002.1| 97378 98223 1 + 846 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) - none -
fig|6666666.65929.peg.509 CDS gi|480756736|gb|AQUY01000002.1| 98440 100152 1 + 1713 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65929.peg.510 CDS gi|480756736|gb|AQUY01000002.1| 100213 101418 1 + 1206 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Biotin synthesis cluster;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65929.peg.511 CDS gi|480756736|gb|AQUY01000002.1| 102397 101468 -1 - 930 Auxin Efflux Carrier - none -
fig|6666666.65929.peg.512 CDS gi|480756736|gb|AQUY01000002.1| 102723 103838 3 + 1116 hypothetical protein - none -
fig|6666666.65929.peg.513 CDS gi|480756736|gb|AQUY01000002.1| 104606 104355 -2 - 252 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.65929.peg.514 CDS gi|480756736|gb|AQUY01000002.1| 104921 104616 -2 - 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.65929.peg.515 CDS gi|480756736|gb|AQUY01000002.1| 105089 104925 -2 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.65929.peg.516 CDS gi|480756736|gb|AQUY01000002.1| 105233 105093 -2 - 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.65929.peg.517 CDS gi|480756736|gb|AQUY01000002.1| 105264 105470 3 + 207 hypothetical protein - none -
fig|6666666.65929.peg.518 CDS gi|480756736|gb|AQUY01000002.1| 105859 106128 1 + 270 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.65929.peg.519 CDS gi|480756736|gb|AQUY01000002.1| 106144 106317 1 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.65929.peg.520 CDS gi|480756736|gb|AQUY01000002.1| 106595 107287 2 + 693 two-component system, response regulator - none -
fig|6666666.65929.peg.521 CDS gi|480756736|gb|AQUY01000002.1| 107284 108738 1 + 1455 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.65929.peg.522 CDS gi|480756736|gb|AQUY01000002.1| 108927 108757 -3 - 171 hypothetical protein - none -
fig|6666666.65929.peg.523 CDS gi|480756736|gb|AQUY01000002.1| 109105 110154 1 + 1050 Heat shock protein HtrA - none -
fig|6666666.65929.peg.524 CDS gi|480756736|gb|AQUY01000002.1| 110195 110770 2 + 576 Molybdenum cofactor biosynthesis protein MoaB - none -
fig|6666666.65929.peg.525 CDS gi|480756736|gb|AQUY01000002.1| 110775 111002 3 + 228 hypothetical protein - none -
fig|6666666.65929.peg.526 CDS gi|480756736|gb|AQUY01000002.1| 111551 111123 -2 - 429 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.65929.peg.527 CDS gi|480756736|gb|AQUY01000002.1| 112281 111622 -3 - 660 Heat shock protein 22.5 (Hsp22.5) - none -
fig|6666666.65929.peg.528 CDS gi|480756736|gb|AQUY01000002.1| 112610 112389 -2 - 222 Type I antifreeze protein - none -
fig|6666666.65929.peg.529 CDS gi|480756736|gb|AQUY01000002.1| 113238 112621 -3 - 618 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65929.peg.530 CDS gi|480756736|gb|AQUY01000002.1| 113355 114272 3 + 918 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.65929.peg.531 CDS gi|480756736|gb|AQUY01000002.1| 114305 115564 2 + 1260 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.65929.peg.532 CDS gi|480756736|gb|AQUY01000002.1| 115601 116275 2 + 675 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.65929.peg.533 CDS gi|480756736|gb|AQUY01000002.1| 116376 117623 3 + 1248 FIG037137: Putative conserved transmembrane protein - none -
fig|6666666.65929.peg.534 CDS gi|480756736|gb|AQUY01000002.1| 118173 118808 3 + 636 Uncharacterized protein MJ0754 - none -
fig|6666666.65929.peg.535 CDS gi|480756736|gb|AQUY01000002.1| 118872 119273 3 + 402 hypothetical protein - none -
fig|6666666.65929.peg.536 CDS gi|480756736|gb|AQUY01000002.1| 119295 120023 3 + 729 hypothetical protein - none -
fig|6666666.65929.peg.537 CDS gi|480756736|gb|AQUY01000002.1| 121475 120030 -2 - 1446 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.538 CDS gi|480756736|gb|AQUY01000002.1| 121592 122479 2 + 888 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.65929.peg.539 CDS gi|480756736|gb|AQUY01000002.1| 122626 124407 1 + 1782 High-affinity choline uptake protein BetT - none -
fig|6666666.65929.peg.540 CDS gi|480756736|gb|AQUY01000002.1| 124454 126295 2 + 1842 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.65929.peg.541 CDS gi|480756736|gb|AQUY01000002.1| 126317 127156 2 + 840 Putative deoxyribonuclease YcfH YcfH
fig|6666666.65929.peg.542 CDS gi|480756736|gb|AQUY01000002.1| 127266 128408 3 + 1143 Cell wall-binding protein - none -
fig|6666666.65929.peg.543 CDS gi|480756736|gb|AQUY01000002.1| 128430 129302 3 + 873 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.65929.peg.544 CDS gi|480756736|gb|AQUY01000002.1| 129330 130307 3 + 978 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65929.peg.545 CDS gi|480756736|gb|AQUY01000002.1| 130357 132198 1 + 1842 ABC transporter, ATP-binding protein - none -
fig|6666666.65929.peg.546 CDS gi|480756736|gb|AQUY01000002.1| 132214 132714 1 + 501 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.65929.peg.547 CDS gi|480756736|gb|AQUY01000002.1| 132829 133473 1 + 645 hypothetical protein - none -
fig|6666666.65929.peg.548 CDS gi|480756736|gb|AQUY01000002.1| 135084 134449 -3 - 636 InterPro IPR000531 - none -
fig|6666666.65929.peg.549 CDS gi|480756736|gb|AQUY01000002.1| 135758 135150 -2 - 609 hypothetical protein - none -
fig|6666666.65929.peg.550 CDS gi|480756736|gb|AQUY01000002.1| 136535 135759 -2 - 777 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components - none -
fig|6666666.65929.peg.551 CDS gi|480756736|gb|AQUY01000002.1| 137635 136538 -1 - 1098 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.65929.peg.552 CDS gi|480756736|gb|AQUY01000002.1| 138521 137619 -2 - 903 iron(III) ABC transporter, solute-binding protein - none -
fig|6666666.65929.peg.553 CDS gi|480756736|gb|AQUY01000002.1| 140485 138962 -1 - 1524 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.65929.peg.554 CDS gi|480756736|gb|AQUY01000002.1| 141713 141066 -2 - 648 hypothetical protein - none -
fig|6666666.65929.peg.555 CDS gi|480756736|gb|AQUY01000002.1| 142929 141838 -3 - 1092 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis);
Zinc regulated enzymes
fig|6666666.65929.peg.556 CDS gi|480756736|gb|AQUY01000002.1| 144448 142961 -1 - 1488 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.65929.peg.557 CDS gi|480756736|gb|AQUY01000002.1| 144925 144536 -1 - 390 CrcB protein - none -
fig|6666666.65929.peg.558 CDS gi|480756736|gb|AQUY01000002.1| 145056 144922 -3 - 135 hypothetical protein - none -
fig|6666666.65929.peg.559 CDS gi|480756736|gb|AQUY01000002.1| 145418 145257 -2 - 162 hypothetical protein - none -
fig|6666666.65929.peg.560 CDS gi|480756736|gb|AQUY01000002.1| 145407 147068 3 + 1662 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.65929.peg.561 CDS gi|480756736|gb|AQUY01000002.1| 147137 147919 2 + 783 hypothetical protein - none -
fig|6666666.65929.peg.562 CDS gi|480756736|gb|AQUY01000002.1| 148062 149543 3 + 1482 FIG00549989: hypothetical protein - none -
fig|6666666.65929.peg.563 CDS gi|480756736|gb|AQUY01000002.1| 150828 149578 -3 - 1251 monooxygenase, putative - none -
fig|6666666.65929.peg.564 CDS gi|480756736|gb|AQUY01000002.1| 150985 151485 1 + 501 Conserved membrane protein - none -
fig|6666666.65929.peg.565 CDS gi|480756736|gb|AQUY01000002.1| 151535 152242 2 + 708 hypothetical protein - none -
fig|6666666.65929.peg.566 CDS gi|480756736|gb|AQUY01000002.1| 152564 153829 2 + 1266 putative integrase - none -
fig|6666666.65929.peg.567 CDS gi|480756736|gb|AQUY01000002.1| 154259 154095 -2 - 165 hypothetical protein - none -
fig|6666666.65929.peg.568 CDS gi|480756736|gb|AQUY01000002.1| 155622 154591 -3 - 1032 hypothetical protein - none -
fig|6666666.65929.peg.569 CDS gi|480756736|gb|AQUY01000002.1| 155821 155615 -1 - 207 hypothetical protein - none -
fig|6666666.65929.peg.570 CDS gi|480756736|gb|AQUY01000002.1| 156735 156262 -3 - 474 hypothetical protein - none -
fig|6666666.65929.peg.571 CDS gi|480756736|gb|AQUY01000002.1| 157108 156740 -1 - 369 hypothetical protein - none -
fig|6666666.65929.peg.572 CDS gi|480756736|gb|AQUY01000002.1| 157610 157164 -2 - 447 hypothetical protein - none -
fig|6666666.65929.peg.573 CDS gi|480756736|gb|AQUY01000002.1| 158491 157697 -1 - 795 hypothetical protein - none -
fig|6666666.65929.peg.574 CDS gi|480756736|gb|AQUY01000002.1| 158929 158720 -1 - 210 hypothetical protein - none -
fig|6666666.65929.peg.575 CDS gi|480756736|gb|AQUY01000002.1| 158894 159028 2 + 135 hypothetical protein - none -
fig|6666666.65929.peg.576 CDS gi|480756736|gb|AQUY01000002.1| 159059 160009 2 + 951 plasmid replication/partition related protein - none -
fig|6666666.65929.peg.577 CDS gi|480756736|gb|AQUY01000002.1| 160110 160517 3 + 408 hypothetical protein - none -
fig|6666666.65929.peg.578 CDS gi|480756736|gb|AQUY01000002.1| 161216 161368 2 + 153 hypothetical protein - none -
fig|6666666.65929.peg.579 CDS gi|480756736|gb|AQUY01000002.1| 161580 161765 3 + 186 hypothetical protein - none -
fig|6666666.65929.peg.580 CDS gi|480756736|gb|AQUY01000002.1| 161792 162118 2 + 327 hypothetical protein - none -
fig|6666666.65929.peg.581 CDS gi|480756736|gb|AQUY01000002.1| 162195 162374 3 + 180 hypothetical protein - none -
fig|6666666.65929.peg.582 CDS gi|480756736|gb|AQUY01000002.1| 162425 162724 2 + 300 hypothetical protein - none -
fig|6666666.65929.peg.583 CDS gi|480756736|gb|AQUY01000002.1| 162721 163170 1 + 450 hypothetical protein - none -
fig|6666666.65929.peg.584 CDS gi|480756736|gb|AQUY01000002.1| 163163 163696 2 + 534 hypothetical protein - none -
fig|6666666.65929.peg.585 CDS gi|480756736|gb|AQUY01000002.1| 163690 164010 1 + 321 hypothetical protein - none -
fig|6666666.65929.peg.586 CDS gi|480756736|gb|AQUY01000002.1| 164085 164258 3 + 174 hypothetical protein - none -
fig|6666666.65929.peg.587 CDS gi|480756736|gb|AQUY01000002.1| 164255 164488 2 + 234 hypothetical protein - none -
fig|6666666.65929.peg.588 CDS gi|480756736|gb|AQUY01000002.1| 164485 164913 1 + 429 hypothetical protein - none -
fig|6666666.65929.peg.589 CDS gi|480756736|gb|AQUY01000002.1| 165066 165179 3 + 114 hypothetical protein - none -
fig|6666666.65929.peg.590 CDS gi|480756736|gb|AQUY01000002.1| 165176 165421 2 + 246 hypothetical protein - none -
fig|6666666.65929.peg.591 CDS gi|480756736|gb|AQUY01000002.1| 165418 166107 1 + 690 hypothetical protein - none -
fig|6666666.65929.peg.592 CDS gi|480756736|gb|AQUY01000002.1| 166104 166238 3 + 135 hypothetical protein - none -
fig|6666666.65929.peg.593 CDS gi|480756736|gb|AQUY01000002.1| 166235 166537 2 + 303 hypothetical protein - none -
fig|6666666.65929.peg.594 CDS gi|480756736|gb|AQUY01000002.1| 166670 167728 2 + 1059 No significant database matches - none -
fig|6666666.65929.peg.595 CDS gi|480756736|gb|AQUY01000002.1| 168352 168657 1 + 306 hypothetical protein - none -
fig|6666666.65929.peg.596 CDS gi|480756736|gb|AQUY01000002.1| 169014 168898 -3 - 117 hypothetical protein - none -
fig|6666666.65929.peg.597 CDS gi|480756736|gb|AQUY01000002.1| 169375 169620 1 + 246 hypothetical protein - none -
fig|6666666.65929.peg.598 CDS gi|480756736|gb|AQUY01000002.1| 169577 171061 2 + 1485 hypothetical protein - none -
fig|6666666.65929.peg.599 CDS gi|480756736|gb|AQUY01000002.1| 171058 172506 1 + 1449 Phage capsid and scaffold Phage capsid proteins
fig|6666666.65929.peg.600 CDS gi|480756736|gb|AQUY01000002.1| 172518 173753 3 + 1236 hypothetical protein - none -
fig|6666666.65929.peg.601 CDS gi|480756736|gb|AQUY01000002.1| 174304 174843 1 + 540 gp6 - none -
fig|6666666.65929.peg.602 CDS gi|480756736|gb|AQUY01000002.1| 174893 175825 2 + 933 Phage major capsid protein Phage capsid proteins
fig|6666666.65929.peg.603 CDS gi|480756736|gb|AQUY01000002.1| 175845 175997 3 + 153 hypothetical protein - none -
fig|6666666.65929.peg.604 CDS gi|480756736|gb|AQUY01000002.1| 176012 176485 2 + 474 Phage protein - none -
fig|6666666.65929.peg.605 CDS gi|480756736|gb|AQUY01000002.1| 176596 176829 1 + 234 hypothetical protein - none -
fig|6666666.65929.peg.606 CDS gi|480756736|gb|AQUY01000002.1| 176833 177003 1 + 171 hypothetical protein - none -
fig|6666666.65929.peg.607 CDS gi|480756736|gb|AQUY01000002.1| 177005 177247 2 + 243 hypothetical protein - none -
fig|6666666.65929.peg.608 CDS gi|480756736|gb|AQUY01000002.1| 177247 177603 1 + 357 hypothetical protein - none -
fig|6666666.65929.peg.609 CDS gi|480756736|gb|AQUY01000002.1| 177647 178258 2 + 612 Phage major tail protein - none -
fig|6666666.65929.peg.610 CDS gi|480756736|gb|AQUY01000002.1| 178363 178641 1 + 279 hypothetical protein - none -
fig|6666666.65929.peg.611 CDS gi|480756736|gb|AQUY01000002.1| 178695 179264 3 + 570 hypothetical protein - none -
fig|6666666.65929.peg.612 CDS gi|480756736|gb|AQUY01000002.1| 179281 185226 1 + 5946 hypothetical protein - none -
fig|6666666.65929.peg.613 CDS gi|480756736|gb|AQUY01000002.1| 185408 185968 2 + 561 immunity-specific protein Beta201 - none -
fig|6666666.65929.peg.614 CDS gi|480756736|gb|AQUY01000002.1| 186013 186846 1 + 834 immunity-specific protein Beta286 - none -
fig|6666666.65929.peg.615 CDS gi|480756736|gb|AQUY01000002.1| 186843 188006 3 + 1164 hypothetical protein - none -
fig|6666666.65929.peg.616 CDS gi|480756736|gb|AQUY01000002.1| 188152 189120 1 + 969 Methyl-accepting chemotaxis protein - none -
fig|6666666.65929.peg.617 CDS gi|480756736|gb|AQUY01000002.1| 189113 190273 2 + 1161 hypothetical protein - none -
fig|6666666.65929.peg.618 CDS gi|480756736|gb|AQUY01000002.1| 190289 190939 2 + 651 hypothetical protein - none -
fig|6666666.65929.peg.619 CDS gi|480756736|gb|AQUY01000002.1| 191019 192389 3 + 1371 hypothetical protein - none -
fig|6666666.65929.peg.620 CDS gi|480756736|gb|AQUY01000002.1| 192395 192748 2 + 354 hypothetical protein - none -
fig|6666666.65929.peg.621 CDS gi|480756736|gb|AQUY01000002.1| 193181 193570 2 + 390 hypothetical protein - none -
fig|6666666.65929.peg.622 CDS gi|480756736|gb|AQUY01000002.1| 193991 195691 2 + 1701 drug resistance transporter, EmrB/QacA subfamily - none -
fig|6666666.65929.peg.623 CDS gi|480756736|gb|AQUY01000002.1| 195704 196126 2 + 423 FIG00543983: hypothetical protein - none -
fig|6666666.65929.peg.624 CDS gi|480756736|gb|AQUY01000002.1| 196148 196897 2 + 750 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.65929.peg.625 CDS gi|480756736|gb|AQUY01000002.1| 197784 196930 -3 - 855 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.65929.peg.626 CDS gi|480756736|gb|AQUY01000002.1| 197955 198077 3 + 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.65929.peg.627 CDS gi|480756736|gb|AQUY01000002.1| 198550 198074 -1 - 477 hypothetical protein - none -
fig|6666666.65929.peg.628 CDS gi|480756736|gb|AQUY01000002.1| 198971 199204 2 + 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.65929.peg.629 CDS gi|480756736|gb|AQUY01000002.1| 199352 199777 2 + 426 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.65929.peg.630 CDS gi|480756736|gb|AQUY01000002.1| 199770 201920 3 + 2151 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65929.peg.631 CDS gi|480756736|gb|AQUY01000002.1| 202004 203023 2 + 1020 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.65929.peg.632 CDS gi|480756736|gb|AQUY01000002.1| 203406 205106 3 + 1701 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.65929.peg.633 CDS gi|480756736|gb|AQUY01000002.1| 205251 206519 3 + 1269 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65929.peg.634 CDS gi|480756736|gb|AQUY01000002.1| 206516 207253 2 + 738 FIG00546117: hypothetical protein - none -
fig|6666666.65929.peg.635 CDS gi|480756736|gb|AQUY01000002.1| 207295 207975 1 + 681 hypothetical protein - none -
fig|6666666.65929.peg.636 CDS gi|480756736|gb|AQUY01000002.1| 208086 209129 3 + 1044 COG3173: Predicted aminoglycoside phosphotransferase - none -
fig|6666666.65929.peg.637 CDS gi|480756736|gb|AQUY01000002.1| 210722 209124 -2 - 1599 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.638 CDS gi|480756736|gb|AQUY01000002.1| 212872 210845 -1 - 2028 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.65929.peg.639 CDS gi|480756736|gb|AQUY01000002.1| 214231 212900 -1 - 1332 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.65929.peg.640 CDS gi|480756736|gb|AQUY01000002.1| 214286 214591 2 + 306 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.65929.peg.641 CDS gi|480756736|gb|AQUY01000002.1| 214613 215170 2 + 558 Transcriptional regulatory protein - none -
fig|6666666.65929.peg.642 CDS gi|480756736|gb|AQUY01000002.1| 215175 216119 3 + 945 possible hydrolase - none -
fig|6666666.65929.peg.643 CDS gi|480756736|gb|AQUY01000002.1| 216241 216885 1 + 645 Rhomboid family protein - none -
fig|6666666.65929.peg.644 CDS gi|480756736|gb|AQUY01000002.1| 216900 217775 3 + 876 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.645 CDS gi|480756736|gb|AQUY01000002.1| 217837 218604 1 + 768 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.65929.peg.646 CDS gi|480756736|gb|AQUY01000002.1| 218655 219434 3 + 780 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended
fig|6666666.65929.peg.647 CDS gi|480756736|gb|AQUY01000002.1| 219434 220075 2 + 642 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.65929.peg.648 CDS gi|480756736|gb|AQUY01000002.1| 220461 220081 -3 - 381 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.649 CDS gi|480756736|gb|AQUY01000002.1| 220877 220458 -2 - 420 hypothetical protein - none -
fig|6666666.65929.peg.651 CDS gi|480756736|gb|AQUY01000002.1| 222543 222061 -3 - 483 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.65929.peg.652 CDS gi|480756736|gb|AQUY01000002.1| 222633 222914 3 + 282 hypothetical protein - none -
fig|6666666.65929.peg.653 CDS gi|480756736|gb|AQUY01000002.1| 223854 225449 3 + 1596 Mobile element protein - none -
fig|6666666.65929.peg.654 CDS gi|480756736|gb|AQUY01000002.1| 225953 227152 2 + 1200 putative lipoprotein - none -
fig|6666666.65929.peg.655 CDS gi|480756736|gb|AQUY01000002.1| 228130 227156 -1 - 975 hypothetical protein - none -
fig|6666666.65929.peg.656 CDS gi|480756736|gb|AQUY01000002.1| 228555 228202 -3 - 354 Transcriptional regulator, GntR family - none -
fig|6666666.65929.peg.657 CDS gi|480756736|gb|AQUY01000002.1| 229334 228573 -2 - 762 membrane protein, putative - none -
fig|6666666.65929.peg.658 CDS gi|480756736|gb|AQUY01000002.1| 230458 229331 -1 - 1128 hypothetical protein - none -
fig|6666666.65929.peg.659 CDS gi|480756736|gb|AQUY01000002.1| 230992 230627 -1 - 366 hypothetical protein - none -
fig|6666666.65929.peg.660 CDS gi|480756736|gb|AQUY01000002.1| 231465 230992 -3 - 474 hypothetical protein - none -
fig|6666666.65929.peg.661 CDS gi|480756736|gb|AQUY01000002.1| 233398 231566 -1 - 1833 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.65929.peg.662 CDS gi|480756736|gb|AQUY01000002.1| 235202 233391 -2 - 1812 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) - none -
fig|6666666.65929.peg.663 CDS gi|480756736|gb|AQUY01000002.1| 236270 235239 -2 - 1032 periplasmic binding protein - none -
fig|6666666.65929.peg.664 CDS gi|480756736|gb|AQUY01000002.1| 237220 236288 -1 - 933 iron (III) ABC transporter ATP-binding - none -
fig|6666666.65929.peg.665 CDS gi|480756736|gb|AQUY01000002.1| 237452 237213 -2 - 240 Hemin ABC transporter, permease protein - none -
fig|6666666.65929.peg.666 CDS gi|480756736|gb|AQUY01000002.1| 237403 238272 1 + 870 hypothetical protein - none -
fig|6666666.65929.peg.667 CDS gi|480756736|gb|AQUY01000002.1| 238370 238936 2 + 567 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.65929.peg.668 CDS gi|480756736|gb|AQUY01000002.1| 239054 240067 2 + 1014 Sodium-dependent transporter - none -
fig|6666666.65929.peg.669 CDS gi|480756736|gb|AQUY01000002.1| 241049 240396 -2 - 654 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.65929.peg.670 CDS gi|480756736|gb|AQUY01000002.1| 241855 241055 -1 - 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.65929.peg.671 CDS gi|480756736|gb|AQUY01000002.1| 243296 241866 -2 - 1431 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.65929.peg.672 CDS gi|480756736|gb|AQUY01000002.1| 243492 246728 3 + 3237 hypothetical protein - none -
fig|6666666.65929.peg.673 CDS gi|480756736|gb|AQUY01000002.1| 246736 247542 1 + 807 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.674 CDS gi|480756736|gb|AQUY01000002.1| 247831 249900 1 + 2070 Copper resistance protein D Copper homeostasis
fig|6666666.65929.peg.675 CDS gi|480756736|gb|AQUY01000002.1| 250129 250713 1 + 585 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.65929.peg.676 CDS gi|480756736|gb|AQUY01000002.1| 250873 252543 1 + 1671 ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.677 CDS gi|480756736|gb|AQUY01000002.1| 252588 253049 3 + 462 hypothetical protein - none -
fig|6666666.65929.peg.678 CDS gi|480756736|gb|AQUY01000002.1| 253049 253816 2 + 768 FIG00545013: hypothetical protein - none -
fig|6666666.65929.peg.679 CDS gi|480756736|gb|AQUY01000002.1| 254172 253831 -3 - 342 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.65929.peg.680 CDS gi|480756736|gb|AQUY01000002.1| 256241 254232 -2 - 2010 FIG00544299: hypothetical protein - none -
fig|6666666.65929.peg.681 CDS gi|480756736|gb|AQUY01000002.1| 256396 258033 1 + 1638 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.65929.peg.682 CDS gi|480756736|gb|AQUY01000002.1| 258026 258958 2 + 933 putative transport protein - none -
fig|6666666.65929.peg.683 CDS gi|480756736|gb|AQUY01000002.1| 258955 259788 1 + 834 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.65929.peg.684 CDS gi|480756736|gb|AQUY01000002.1| 259785 261524 3 + 1740 putative ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.685 CDS gi|480756736|gb|AQUY01000002.1| 261569 262822 2 + 1254 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.65929.peg.686 CDS gi|480756736|gb|AQUY01000002.1| 265522 262859 -1 - 2664 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.65929.peg.687 CDS gi|480756736|gb|AQUY01000002.1| 265577 266212 2 + 636 FIG00544229: hypothetical protein - none -
fig|6666666.65929.peg.688 CDS gi|480756736|gb|AQUY01000002.1| 266227 266700 1 + 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.65929.peg.689 CDS gi|480756736|gb|AQUY01000002.1| 267656 266802 -2 - 855 FIG00997919: hypothetical protein - none -
fig|6666666.65929.peg.690 CDS gi|480756736|gb|AQUY01000002.1| 268099 267869 -1 - 231 FIG00544802: hypothetical protein - none -
fig|6666666.65929.peg.691 CDS gi|480756736|gb|AQUY01000002.1| 269002 270369 1 + 1368 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.65929.peg.692 CDS gi|480756736|gb|AQUY01000002.1| 270546 271115 3 + 570 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65929.peg.693 CDS gi|480756736|gb|AQUY01000002.1| 271163 271792 2 + 630 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.65929.peg.694 CDS gi|480756736|gb|AQUY01000002.1| 271914 273197 3 + 1284 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.65929.peg.695 CDS gi|480756736|gb|AQUY01000002.1| 274066 273215 -1 - 852 putative integral membrane protein (possible nuclease activity) - none -
fig|6666666.65929.peg.696 CDS gi|480756736|gb|AQUY01000002.1| 275160 274336 -3 - 825 Transcriptional regulator, TetR family - none -
fig|6666666.65929.peg.697 CDS gi|480756736|gb|AQUY01000002.1| 275416 276399 1 + 984 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65929.peg.698 CDS gi|480756736|gb|AQUY01000002.1| 276532 279303 1 + 2772 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.65929.peg.699 CDS gi|480756736|gb|AQUY01000002.1| 279300 281165 3 + 1866 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.65929.peg.700 CDS gi|480756736|gb|AQUY01000002.1| 281162 281656 2 + 495 Putative membrane protein - none -
fig|6666666.65929.peg.701 CDS gi|480756736|gb|AQUY01000002.1| 281771 282181 2 + 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.65929.peg.702 CDS gi|480756736|gb|AQUY01000002.1| 282479 285931 2 + 3453 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.65929.peg.703 CDS gi|480756736|gb|AQUY01000002.1| 286151 286459 2 + 309 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65929.peg.704 CDS gi|480756736|gb|AQUY01000002.1| 286529 286789 2 + 261 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.65929.peg.705 CDS gi|480756736|gb|AQUY01000002.1| 286981 288492 1 + 1512 COG0536: GTP-binding protein Obg - none -
fig|6666666.65929.peg.706 CDS gi|480756736|gb|AQUY01000002.1| 288620 289768 2 + 1149 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.65929.peg.707 CDS gi|480756736|gb|AQUY01000002.1| 289805 291127 2 + 1323 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.65929.peg.708 CDS gi|480756736|gb|AQUY01000002.1| 291124 291771 1 + 648 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.65929.peg.709 CDS gi|480756736|gb|AQUY01000002.1| 291786 292250 3 + 465 Iojap protein - none -
fig|6666666.65929.peg.710 CDS gi|480756736|gb|AQUY01000002.1| 292271 292999 2 + 729 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65929.peg.711 CDS gi|480756736|gb|AQUY01000002.1| 292996 294219 1 + 1224 hypothetical protein - none -
fig|6666666.65929.peg.712 CDS gi|480756736|gb|AQUY01000002.1| 294342 295157 3 + 816 Putative competence protein ComEA - none -
fig|6666666.65929.peg.713 CDS gi|480756736|gb|AQUY01000002.1| 295574 296614 2 + 1041 ComEC/Rec2-related protein - none -
fig|6666666.65929.peg.714 CDS gi|480756736|gb|AQUY01000002.1| 296619 297614 3 + 996 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.65929.peg.715 CDS gi|480756736|gb|AQUY01000002.1| 298084 297611 -1 - 474 hypothetical protein - none -
fig|6666666.65929.peg.716 CDS gi|480756736|gb|AQUY01000002.1| 298789 298088 -1 - 702 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65929.peg.717 CDS gi|480756736|gb|AQUY01000002.1| 299285 299013 -2 - 273 SSU ribosomal protein S20p - none -
fig|6666666.65929.peg.718 CDS gi|480756736|gb|AQUY01000002.1| 300011 299487 -2 - 525 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.65929.peg.719 CDS gi|480756736|gb|AQUY01000002.1| 300218 302059 2 + 1842 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.65929.peg.720 CDS gi|480756736|gb|AQUY01000002.1| 302123 302620 2 + 498 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.65929.peg.721 CDS gi|480756736|gb|AQUY01000002.1| 303309 302656 -3 - 654 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.65929.peg.722 CDS gi|480756736|gb|AQUY01000002.1| 304034 303330 -2 - 705 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.65929.peg.723 CDS gi|480756736|gb|AQUY01000002.1| 304747 307500 1 + 2754 hypothetical protein - none -
fig|6666666.65929.peg.724 CDS gi|480756736|gb|AQUY01000002.1| 307575 309416 3 + 1842 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.65929.peg.725 CDS gi|480756736|gb|AQUY01000002.1| 309528 310394 3 + 867 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Valine degradation
fig|6666666.65929.peg.726 CDS gi|480756736|gb|AQUY01000002.1| 310506 311771 3 + 1266 Putative phosphatase - none -
fig|6666666.65929.peg.727 CDS gi|480756736|gb|AQUY01000002.1| 313624 311768 -1 - 1857 putative ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.728 CDS gi|480756736|gb|AQUY01000002.1| 313829 313963 2 + 135 hypothetical protein - none -
fig|6666666.65929.peg.729 CDS gi|480756736|gb|AQUY01000002.1| 315236 313941 -2 - 1296 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.65929.peg.730 CDS gi|480756736|gb|AQUY01000002.1| 316647 315217 -3 - 1431 hypothetical protein - none -
fig|6666666.65929.peg.731 CDS gi|480756736|gb|AQUY01000002.1| 317124 316648 -3 - 477 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.65929.peg.732 CDS gi|480756736|gb|AQUY01000002.1| 317163 319253 3 + 2091 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.65929.peg.733 CDS gi|480756736|gb|AQUY01000002.1| 319308 319511 3 + 204 hypothetical protein - none -
fig|6666666.65929.peg.734 CDS gi|480756736|gb|AQUY01000002.1| 321814 319625 -1 - 2190 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65929.peg.735 CDS gi|480756736|gb|AQUY01000002.1| 321881 323263 2 + 1383 FAD dependent oxidoreductase - none -
fig|6666666.65929.peg.736 CDS gi|480756736|gb|AQUY01000002.1| 323334 325166 3 + 1833 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.737 CDS gi|480756736|gb|AQUY01000002.1| 325369 326055 1 + 687 hypothetical protein - none -
fig|6666666.65929.peg.738 CDS gi|480756736|gb|AQUY01000002.1| 326070 327263 3 + 1194 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.65929.peg.739 CDS gi|480756736|gb|AQUY01000002.1| 327286 328281 1 + 996 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.65929.peg.740 CDS gi|480756736|gb|AQUY01000002.1| 328356 329495 3 + 1140 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65929.peg.741 CDS gi|480756736|gb|AQUY01000002.1| 329514 330266 3 + 753 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.65929.peg.742 CDS gi|480756736|gb|AQUY01000002.1| 330414 331352 3 + 939 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.65929.peg.743 CDS gi|480756736|gb|AQUY01000002.1| 331355 331915 2 + 561 FIG000233: metal-dependent hydrolase - none -
fig|6666666.65929.peg.744 CDS gi|480756736|gb|AQUY01000002.1| 331915 333261 1 + 1347 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65929.peg.745 CDS gi|480756736|gb|AQUY01000002.1| 333254 334264 2 + 1011 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65929.peg.746 CDS gi|480756736|gb|AQUY01000002.1| 334313 335053 2 + 741 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.65929.peg.747 CDS gi|480756736|gb|AQUY01000002.1| 335065 335829 1 + 765 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65929.peg.748 CDS gi|480756736|gb|AQUY01000002.1| 336359 335886 -2 - 474 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.65929.peg.749 CDS gi|480756736|gb|AQUY01000002.1| 336484 337869 1 + 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.65929.peg.750 CDS gi|480756736|gb|AQUY01000002.1| 337888 338571 1 + 684 hypothetical protein - none -
fig|6666666.65929.peg.751 CDS gi|480756736|gb|AQUY01000002.1| 338573 339079 2 + 507 hypothetical protein - none -
fig|6666666.65929.peg.752 CDS gi|480756736|gb|AQUY01000002.1| 341011 339086 -1 - 1926 FIG00543878: hypothetical protein - none -
fig|6666666.65929.peg.753 CDS gi|480756736|gb|AQUY01000002.1| 341015 341164 2 + 150 hypothetical protein - none -
fig|6666666.65929.peg.754 CDS gi|480756736|gb|AQUY01000002.1| 341239 342543 1 + 1305 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.65929.peg.755 CDS gi|480756736|gb|AQUY01000002.1| 342839 342558 -2 - 282 putative ribonuclease - none -
fig|6666666.65929.peg.756 CDS gi|480756736|gb|AQUY01000002.1| 343250 344443 2 + 1194 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65929.peg.757 CDS gi|480756736|gb|AQUY01000002.1| 344507 346453 2 + 1947 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.65929.peg.758 CDS gi|480756736|gb|AQUY01000002.1| 346764 348020 3 + 1257 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65929.peg.759 CDS gi|480756736|gb|AQUY01000002.1| 348838 348017 -1 - 822 Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
5-FCL-like protein;
Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.65929.peg.760 CDS gi|480756736|gb|AQUY01000002.1| 349479 348874 -3 - 606 hypothetical protein - none -
fig|6666666.65929.peg.761 CDS gi|480756736|gb|AQUY01000002.1| 350571 349591 -3 - 981 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65929.peg.762 CDS gi|480756736|gb|AQUY01000002.1| 351556 350633 -1 - 924 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65929.peg.763 CDS gi|480756736|gb|AQUY01000002.1| 351863 352597 2 + 735 hypothetical protein - none -
fig|6666666.65929.peg.764 CDS gi|480756736|gb|AQUY01000002.1| 352953 354338 3 + 1386 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.65929.peg.765 CDS gi|480756736|gb|AQUY01000002.1| 354368 355267 2 + 900 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.65929.peg.766 CDS gi|480756736|gb|AQUY01000002.1| 355805 356167 2 + 363 hypothetical protein - none -
fig|6666666.65929.peg.767 CDS gi|480756736|gb|AQUY01000002.1| 356491 356189 -1 - 303 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.768 CDS gi|480756736|gb|AQUY01000002.1| 357315 356497 -3 - 819 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.65929.peg.769 CDS gi|480756736|gb|AQUY01000002.1| 360110 357366 -2 - 2745 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.770 CDS gi|480756736|gb|AQUY01000002.1| 360392 360820 2 + 429 FIG00544601: hypothetical protein - none -
fig|6666666.65929.peg.771 CDS gi|480756736|gb|AQUY01000002.1| 362485 361013 -1 - 1473 putative ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.772 CDS gi|480756736|gb|AQUY01000002.1| 363279 362482 -3 - 798 ABC transporter, permease protein - none -
fig|6666666.65929.peg.773 CDS gi|480756736|gb|AQUY01000002.1| 364124 363276 -2 - 849 Peptide ABC transporter, permease protein - none -
fig|6666666.65929.peg.774 CDS gi|480756736|gb|AQUY01000002.1| 365747 364257 -2 - 1491 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.65929.peg.775 CDS gi|480756736|gb|AQUY01000002.1| 366073 367668 1 + 1596 hypothetical protein - none -
fig|6666666.65929.peg.776 CDS gi|480756736|gb|AQUY01000002.1| 367947 369416 3 + 1470 ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.777 CDS gi|480756736|gb|AQUY01000002.1| 370246 369413 -1 - 834 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.65929.peg.778 CDS gi|480756736|gb|AQUY01000002.1| 370778 370257 -2 - 522 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.65929.peg.779 CDS gi|480756736|gb|AQUY01000002.1| 371473 370778 -1 - 696 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.65929.peg.780 CDS gi|480756736|gb|AQUY01000002.1| 371741 372004 2 + 264 hypothetical protein - none -
fig|6666666.65929.peg.781 CDS gi|480756736|gb|AQUY01000002.1| 372062 372313 2 + 252 hypothetical protein - none -
fig|6666666.65929.peg.782 CDS gi|480756736|gb|AQUY01000002.1| 372324 372551 3 + 228 hypothetical protein - none -
fig|6666666.65929.peg.783 CDS gi|480756736|gb|AQUY01000002.1| 372682 373875 1 + 1194 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.65929.peg.784 CDS gi|480756736|gb|AQUY01000002.1| 373879 374631 1 + 753 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.65929.peg.785 CDS gi|480756736|gb|AQUY01000002.1| 375146 376594 2 + 1449 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.65929.peg.786 CDS gi|480756736|gb|AQUY01000002.1| 377739 376591 -3 - 1149 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.65929.peg.787 CDS gi|480756736|gb|AQUY01000002.1| 377851 378057 1 + 207 hypothetical protein - none -
fig|6666666.65929.peg.788 CDS gi|480756736|gb|AQUY01000002.1| 379804 378164 -1 - 1641 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.65929.peg.789 CDS gi|480756736|gb|AQUY01000002.1| 380620 379817 -1 - 804 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.65929.peg.790 CDS gi|480756736|gb|AQUY01000002.1| 380662 382011 1 + 1350 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.791 CDS gi|480756736|gb|AQUY01000002.1| 382013 385150 2 + 3138 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.65929.peg.792 CDS gi|480756736|gb|AQUY01000002.1| 386805 385558 -3 - 1248 hypothetical protein - none -
fig|6666666.65929.peg.793 CDS gi|480756736|gb|AQUY01000002.1| 387507 388067 3 + 561 hypothetical protein - none -
fig|6666666.65929.peg.794 CDS gi|480756736|gb|AQUY01000002.1| 388195 389253 1 + 1059 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.65929.peg.795 CDS gi|480756736|gb|AQUY01000002.1| 389317 390159 1 + 843 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.65929.peg.796 CDS gi|480756736|gb|AQUY01000002.1| 390140 390907 2 + 768 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.65929.peg.797 CDS gi|480756736|gb|AQUY01000002.1| 390967 392451 1 + 1485 hypothetical protein - none -
fig|6666666.65929.peg.798 CDS gi|480756736|gb|AQUY01000002.1| 392524 393621 1 + 1098 Homoisocitrate dehydrogenase (EC 1.1.1.87) - none -
fig|6666666.65929.peg.799 CDS gi|480756736|gb|AQUY01000002.1| 393815 394309 2 + 495 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.800 CDS gi|480756736|gb|AQUY01000002.1| 394333 395454 1 + 1122 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.801 CDS gi|480756736|gb|AQUY01000002.1| 396356 395442 -2 - 915 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.65929.peg.802 CDS gi|480756736|gb|AQUY01000002.1| 396475 396362 -1 - 114 hypothetical protein - none -
fig|6666666.65929.peg.803 CDS gi|480756736|gb|AQUY01000002.1| 397691 396462 -2 - 1230 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.65929.peg.804 CDS gi|480756736|gb|AQUY01000002.1| 398534 397719 -2 - 816 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65929.peg.805 CDS gi|480756736|gb|AQUY01000002.1| 399290 398640 -2 - 651 Transcriptional regulator, TetR family - none -
fig|6666666.65929.peg.806 CDS gi|480756736|gb|AQUY01000002.1| 399631 400203 1 + 573 Phosphoglycerate mutase family protein - none -
fig|6666666.65929.peg.807 CDS gi|480756736|gb|AQUY01000002.1| 401222 400206 -2 - 1017 Type II restriction enzyme NaeI (EC 3.1.21.4) - none -
fig|6666666.65929.peg.808 CDS gi|480756736|gb|AQUY01000002.1| 401330 402304 2 + 975 Modification methylase NgoMIV (EC 2.1.1.37) - none -
fig|6666666.65929.peg.809 CDS gi|480756736|gb|AQUY01000002.1| 403626 402448 -3 - 1179 hypothetical protein - none -
fig|6666666.65929.peg.810 CDS gi|480756736|gb|AQUY01000002.1| 403900 403766 -1 - 135 hypothetical protein - none -
fig|6666666.65929.peg.811 CDS gi|480756736|gb|AQUY01000002.1| 405378 403939 -3 - 1440 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.812 CDS gi|480756736|gb|AQUY01000002.1| 405521 406042 2 + 522 FIG00543905: hypothetical protein - none -
fig|6666666.65929.peg.813 CDS gi|480756736|gb|AQUY01000002.1| 407656 406073 -1 - 1584 putative transport protein - none -
fig|6666666.65929.peg.814 CDS gi|480756736|gb|AQUY01000002.1| 408572 407796 -2 - 777 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.65929.peg.815 CDS gi|480756736|gb|AQUY01000002.1| 409671 408631 -3 - 1041 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65929.peg.816 CDS gi|480756736|gb|AQUY01000002.1| 410395 409700 -1 - 696 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.65929.peg.817 CDS gi|480756736|gb|AQUY01000002.1| 412613 410532 -2 - 2082 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes;
Valine degradation
fig|6666666.65929.peg.818 CDS gi|480756736|gb|AQUY01000002.1| 412920 413240 3 + 321 Putative oxidoreductase - none -
fig|6666666.65929.peg.819 CDS gi|480756736|gb|AQUY01000002.1| 414756 413254 -3 - 1503 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.65929.peg.820 CDS gi|480756736|gb|AQUY01000002.1| 414828 415976 3 + 1149 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions;
Valine degradation
fig|6666666.65929.peg.821 CDS gi|480756736|gb|AQUY01000002.1| 416422 416087 -1 - 336 hypothetical protein - none -
fig|6666666.65929.peg.822 CDS gi|480756736|gb|AQUY01000002.1| 417471 416500 -3 - 972 hypothetical protein - none -
fig|6666666.65929.peg.823 CDS gi|480756736|gb|AQUY01000002.1| 418268 417558 -2 - 711 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.65929.peg.824 CDS gi|480756736|gb|AQUY01000002.1| 419201 418347 -2 - 855 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Valine degradation
fig|6666666.65929.peg.825 CDS gi|480756736|gb|AQUY01000002.1| 420869 419223 -2 - 1647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.826 CDS gi|480756736|gb|AQUY01000002.1| 421125 421466 3 + 342 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.65929.peg.827 CDS gi|480756736|gb|AQUY01000002.1| 423501 421585 -3 - 1917 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65929.peg.828 CDS gi|480756736|gb|AQUY01000002.1| 423800 424894 2 + 1095 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65929.peg.829 CDS gi|480756736|gb|AQUY01000002.1| 424926 425357 3 + 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.65929.peg.830 CDS gi|480756736|gb|AQUY01000002.1| 425583 426764 3 + 1182 periplasmic binding protein - none -
fig|6666666.65929.peg.831 CDS gi|480756736|gb|AQUY01000002.1| 426778 427878 1 + 1101 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.65929.peg.832 CDS gi|480756736|gb|AQUY01000002.1| 427875 428648 3 + 774 Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) - none -
fig|6666666.65929.peg.833 CDS gi|480756736|gb|AQUY01000002.1| 430358 428757 -2 - 1602 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65929.peg.834 CDS gi|480756736|gb|AQUY01000002.1| 431605 430394 -1 - 1212 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65929.peg.835 CDS gi|480756736|gb|AQUY01000002.1| 432450 431602 -3 - 849 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.65929.peg.836 CDS gi|480756736|gb|AQUY01000002.1| 433115 432528 -2 - 588 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.65929.peg.837 CDS gi|480756736|gb|AQUY01000002.1| 433512 434570 3 + 1059 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65929.peg.838 CDS gi|480756736|gb|AQUY01000002.1| 436121 434601 -2 - 1521 DNA polymerase III epsilon subunit-related protein MSMEG4261 DNA replication strays
fig|6666666.65929.peg.839 CDS gi|480756736|gb|AQUY01000002.1| 436775 437380 2 + 606 putative secreted protein - none -
fig|6666666.65929.peg.840 CDS gi|480756736|gb|AQUY01000002.1| 437610 438689 3 + 1080 putative secreted protein - none -
fig|6666666.65929.peg.841 CDS gi|480756736|gb|AQUY01000002.1| 438788 439933 2 + 1146 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.65929.peg.842 CDS gi|480756736|gb|AQUY01000002.1| 439926 440837 3 + 912 putative sugar kinase - none -
fig|6666666.65929.peg.843 CDS gi|480756736|gb|AQUY01000002.1| 440834 441577 2 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.844 CDS gi|480756736|gb|AQUY01000002.1| 441605 442114 2 + 510 hypothetical protein - none -
fig|6666666.65929.peg.845 CDS gi|480756736|gb|AQUY01000002.1| 442129 443529 1 + 1401 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65929.peg.846 CDS gi|480756736|gb|AQUY01000002.1| 445741 443546 -1 - 2196 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.65929.peg.847 CDS gi|480756736|gb|AQUY01000002.1| 447627 446110 -3 - 1518 Carotene biosynthesis associated membrane protein - none -
fig|6666666.65929.peg.848 CDS gi|480756736|gb|AQUY01000002.1| 449300 447648 -2 - 1653 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.65929.peg.849 CDS gi|480756736|gb|AQUY01000002.1| 450381 449317 -3 - 1065 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.65929.peg.850 CDS gi|480756736|gb|AQUY01000002.1| 450602 451450 2 + 849 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.65929.peg.851 CDS gi|480756736|gb|AQUY01000002.1| 452255 451482 -2 - 774 Lipoprotein LppM - none -
fig|6666666.65929.peg.852 CDS gi|480756736|gb|AQUY01000002.1| 452880 452260 -3 - 621 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65929.peg.853 CDS gi|480756736|gb|AQUY01000002.1| 453018 453395 3 + 378 hypothetical protein - none -
fig|6666666.65929.peg.854 CDS gi|480756736|gb|AQUY01000002.1| 453758 454030 2 + 273 hypothetical protein - none -
fig|6666666.65929.peg.855 CDS gi|480756736|gb|AQUY01000002.1| 454736 454137 -2 - 600 hypothetical protein - none -
fig|6666666.65929.peg.856 CDS gi|480756736|gb|AQUY01000002.1| 455163 455594 3 + 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65929.peg.857 CDS gi|480756736|gb|AQUY01000002.1| 455724 456728 3 + 1005 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.65929.peg.858 CDS gi|480756736|gb|AQUY01000002.1| 456731 457582 2 + 852 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.65929.peg.859 CDS gi|480756736|gb|AQUY01000002.1| 457675 459630 1 + 1956 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.860 CDS gi|480756736|gb|AQUY01000002.1| 459672 461279 3 + 1608 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65929.peg.861 CDS gi|480756736|gb|AQUY01000002.1| 461276 462772 2 + 1497 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65929.peg.862 CDS gi|480756736|gb|AQUY01000002.1| 462775 463881 1 + 1107 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.65929.peg.863 CDS gi|480756736|gb|AQUY01000002.1| 463881 465302 3 + 1422 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65929.peg.864 CDS gi|480756736|gb|AQUY01000002.1| 465305 466852 2 + 1548 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65929.peg.865 CDS gi|480756736|gb|AQUY01000002.1| 466849 467964 1 + 1116 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.65929.peg.866 CDS gi|480756736|gb|AQUY01000002.1| 467961 469415 3 + 1455 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65929.peg.867 CDS gi|480756736|gb|AQUY01000002.1| 469429 470085 1 + 657 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65929.peg.868 CDS gi|480756736|gb|AQUY01000002.1| 470232 471542 3 + 1311 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.65929.peg.869 CDS gi|480756736|gb|AQUY01000002.1| 471563 472264 2 + 702 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65929.peg.870 CDS gi|480756736|gb|AQUY01000002.1| 472358 472912 2 + 555 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65929.peg.871 CDS gi|480756736|gb|AQUY01000002.1| 473011 473265 1 + 255 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.65929.peg.872 CDS gi|480756736|gb|AQUY01000002.1| 473744 474754 2 + 1011 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.65929.peg.873 CDS gi|480756736|gb|AQUY01000002.1| 474864 475019 3 + 156 hypothetical protein - none -
fig|6666666.65929.peg.874 CDS gi|480756736|gb|AQUY01000002.1| 475348 478545 1 + 3198 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.65929.peg.875 CDS gi|480756736|gb|AQUY01000002.1| 480374 478689 -2 - 1686 hypothetical protein - none -
fig|6666666.65929.peg.876 CDS gi|480756736|gb|AQUY01000002.1| 482442 480802 -3 - 1641 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.65929.peg.877 CDS gi|480756736|gb|AQUY01000002.1| 484062 482446 -3 - 1617 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.65929.peg.878 CDS gi|480756736|gb|AQUY01000002.1| 485554 484325 -1 - 1230 Protein RtcB - none -
fig|6666666.65929.peg.879 CDS gi|480756736|gb|AQUY01000002.1| 485849 485685 -2 - 165 hypothetical protein - none -
fig|6666666.65929.peg.880 CDS gi|480756736|gb|AQUY01000002.1| 486858 485950 -3 - 909 hypothetical protein - none -
fig|6666666.65929.peg.881 CDS gi|480756736|gb|AQUY01000002.1| 487958 487428 -2 - 531 glucan synthase 1-related protein - none -
fig|6666666.65929.peg.882 CDS gi|480756736|gb|AQUY01000002.1| 488347 488718 1 + 372 Conserved protein - none -
fig|6666666.65929.peg.883 CDS gi|480756736|gb|AQUY01000002.1| 488919 491732 3 + 2814 CRISPR-associated helicase Cas3, protein CRISPRs
fig|6666666.65929.peg.884 CDS gi|480756736|gb|AQUY01000002.1| 491998 493665 1 + 1668 CRISPR-associated protein, Cse1 family CRISPRs
fig|6666666.65929.peg.885 CDS gi|480756736|gb|AQUY01000002.1| 494357 495541 2 + 1185 CRISPR-associated protein, CT1975 family - none -
fig|6666666.65929.peg.886 CDS gi|480756736|gb|AQUY01000002.1| 495545 496252 2 + 708 CRISPR-associated protein, CT1976 - none -
fig|6666666.65929.peg.887 CDS gi|480756736|gb|AQUY01000002.1| 497370 497861 3 + 492 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.65929.peg.888 CDS gi|480756736|gb|AQUY01000002.1| 498725 498375 -2 - 351 hypothetical protein - none -
fig|6666666.65929.peg.889 CDS gi|480756736|gb|AQUY01000002.1| 499788 498982 -3 - 807 hypothetical protein - none -
fig|6666666.65929.peg.890 CDS gi|480756736|gb|AQUY01000002.1| 500388 500092 -3 - 297 hypothetical protein - none -
fig|6666666.65929.peg.891 CDS gi|480756736|gb|AQUY01000002.1| 501302 500448 -2 - 855 hypothetical protein - none -
fig|6666666.65929.peg.892 CDS gi|480756736|gb|AQUY01000002.1| 502174 501293 -1 - 882 hypothetical protein - none -
fig|6666666.65929.peg.893 CDS gi|480756736|gb|AQUY01000002.1| 502647 502336 -3 - 312 hypothetical protein - none -
fig|6666666.65929.peg.894 CDS gi|480756736|gb|AQUY01000002.1| 502778 502647 -2 - 132 hypothetical protein - none -
fig|6666666.65929.peg.895 CDS gi|480756736|gb|AQUY01000002.1| 503065 502829 -1 - 237 hypothetical protein - none -
fig|6666666.65929.peg.896 CDS gi|480756736|gb|AQUY01000002.1| 503259 503062 -3 - 198 hypothetical protein - none -
fig|6666666.65929.peg.897 CDS gi|480756736|gb|AQUY01000002.1| 503919 503263 -3 - 657 hypothetical protein - none -
fig|6666666.65929.peg.898 CDS gi|480756736|gb|AQUY01000002.1| 504246 504127 -3 - 120 hypothetical protein - none -
fig|6666666.65929.peg.899 CDS gi|480756736|gb|AQUY01000002.1| 504487 504239 -1 - 249 hypothetical protein - none -
fig|6666666.65929.peg.900 CDS gi|480756736|gb|AQUY01000002.1| 504755 506179 2 + 1425 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.65929.peg.901 CDS gi|480756736|gb|AQUY01000002.1| 507098 506190 -2 - 909 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65929.peg.902 CDS gi|480756736|gb|AQUY01000002.1| 507234 507842 3 + 609 Putative secreted protein - none -
fig|6666666.65929.peg.903 CDS gi|480756736|gb|AQUY01000002.1| 508755 507859 -3 - 897 hypothetical protein - none -
fig|6666666.65929.peg.904 CDS gi|480756736|gb|AQUY01000002.1| 508816 509355 1 + 540 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.65929.peg.905 CDS gi|480756736|gb|AQUY01000002.1| 509399 510277 2 + 879 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65929.peg.906 CDS gi|480756736|gb|AQUY01000002.1| 510314 510967 2 + 654 hypothetical protein - none -
fig|6666666.65929.peg.907 CDS gi|480756736|gb|AQUY01000002.1| 510986 511864 2 + 879 Protein rarD - none -
fig|6666666.65929.peg.908 CDS gi|480756736|gb|AQUY01000002.1| 513201 511837 -3 - 1365 FAD-dependent oxidoreductase - none -
fig|6666666.65929.peg.909 CDS gi|480756736|gb|AQUY01000002.1| 514439 513198 -2 - 1242 L-gulono-1,4-lactone oxidase (EC 1.1.3.8) - none -
fig|6666666.65929.peg.910 CDS gi|480756736|gb|AQUY01000002.1| 514696 515769 1 + 1074 TRAP transporter solute receptor, unknown substrate 3 - none -
fig|6666666.65929.peg.911 CDS gi|480756736|gb|AQUY01000002.1| 515769 516380 3 + 612 hypothetical protein - none -
fig|6666666.65929.peg.912 CDS gi|480756736|gb|AQUY01000002.1| 516380 517666 2 + 1287 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.65929.peg.913 CDS gi|480756736|gb|AQUY01000002.1| 517731 518540 3 + 810 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Valine degradation
fig|6666666.65929.peg.914 CDS gi|480756736|gb|AQUY01000002.1| 519275 518544 -2 - 732 Transcriptional regulator, IclR family - none -
fig|6666666.65929.peg.915 CDS gi|480756736|gb|AQUY01000002.1| 519449 520594 2 + 1146 FadE30 - none -
fig|6666666.65929.peg.916 CDS gi|480756736|gb|AQUY01000002.1| 520594 521661 1 + 1068 Acyl-CoA dehydrogenase, C-terminal - none -
fig|6666666.65929.peg.917 CDS gi|480756736|gb|AQUY01000002.1| 521661 522857 3 + 1197 CAIB/BAIF family protein - none -
fig|6666666.65929.peg.918 CDS gi|480756736|gb|AQUY01000002.1| 522924 526502 3 + 3579 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65929.peg.919 CDS gi|480756736|gb|AQUY01000002.1| 526527 527831 3 + 1305 Threonine dehydratase (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis;
Threonine degradation
fig|6666666.65929.peg.920 CDS gi|480756736|gb|AQUY01000002.1| 527895 529421 3 + 1527 hypothetical protein - none -
fig|6666666.65929.peg.921 CDS gi|480756736|gb|AQUY01000002.1| 529478 533083 2 + 3606 hypothetical protein - none -
fig|6666666.65929.peg.922 CDS gi|480756736|gb|AQUY01000002.1| 534972 533086 -3 - 1887 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) Trehalose Biosynthesis
fig|6666666.65929.peg.923 CDS gi|480756736|gb|AQUY01000002.1| 535047 535742 3 + 696 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.65929.peg.924 CDS gi|480756736|gb|AQUY01000002.1| 535796 535978 2 + 183 hypothetical protein - none -
fig|6666666.65929.peg.925 CDS gi|480756736|gb|AQUY01000002.1| 536026 536376 1 + 351 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.65929.peg.926 CDS gi|480756736|gb|AQUY01000002.1| 537625 536444 -1 - 1182 hypothetical protein - none -
fig|6666666.65929.peg.927 CDS gi|480756736|gb|AQUY01000002.1| 538463 537963 -2 - 501 DUF1794 Iron-sulfur cluster assembly
fig|6666666.65929.peg.928 CDS gi|480756736|gb|AQUY01000002.1| 538600 539592 1 + 993 ABC transporter substrate-binding protein - none -
fig|6666666.65929.peg.929 CDS gi|480756736|gb|AQUY01000002.1| 539589 540470 3 + 882 ABC-type transporter, permease component - none -
fig|6666666.65929.peg.930 CDS gi|480756736|gb|AQUY01000002.1| 540476 541267 2 + 792 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.65929.peg.931 CDS gi|480756736|gb|AQUY01000002.1| 542356 541295 -1 - 1062 FIG00544169: hypothetical protein - none -
fig|6666666.65929.peg.932 CDS gi|480756736|gb|AQUY01000002.1| 544767 542356 -3 - 2412 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.65929.peg.933 CDS gi|480756736|gb|AQUY01000002.1| 545493 544780 -3 - 714 hypothetical protein - none -
fig|6666666.65929.peg.934 CDS gi|480756736|gb|AQUY01000002.1| 547041 545635 -3 - 1407 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.65929.peg.935 CDS gi|480756736|gb|AQUY01000002.1| 547185 547421 3 + 237 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.65929.peg.936 CDS gi|480756736|gb|AQUY01000002.1| 549568 547418 -1 - 2151 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65929.peg.937 CDS gi|480756736|gb|AQUY01000002.1| 550200 549616 -3 - 585 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.65929.peg.938 CDS gi|480756736|gb|AQUY01000002.1| 550278 550574 3 + 297 Unnamed protein product - none -
fig|6666666.65929.peg.939 CDS gi|480756736|gb|AQUY01000002.1| 550775 551788 2 + 1014 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65929.peg.940 CDS gi|480756736|gb|AQUY01000002.1| 551791 552078 1 + 288 hypothetical protein - none -
fig|6666666.65929.peg.941 CDS gi|480756736|gb|AQUY01000002.1| 552120 553487 3 + 1368 putative major facilitator superfamily (MFS) transporter - none -
fig|6666666.65929.peg.942 CDS gi|480756736|gb|AQUY01000002.1| 553510 554064 1 + 555 hypothetical protein - none -
fig|6666666.65929.peg.943 CDS gi|480756736|gb|AQUY01000002.1| 557779 554039 -1 - 3741 hypothetical protein - none -
fig|6666666.65929.peg.944 CDS gi|480756736|gb|AQUY01000002.1| 558019 559089 1 + 1071 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.65929.peg.945 CDS gi|480756736|gb|AQUY01000002.1| 559093 559995 1 + 903 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.65929.peg.946 CDS gi|480756736|gb|AQUY01000002.1| 561143 560013 -2 - 1131 hypothetical protein - none -
fig|6666666.65929.peg.947 CDS gi|480756736|gb|AQUY01000002.1| 562779 561157 -3 - 1623 hypothetical protein - none -
fig|6666666.65929.peg.948 CDS gi|480756736|gb|AQUY01000002.1| 562826 564220 2 + 1395 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.65929.peg.949 CDS gi|480756736|gb|AQUY01000002.1| 564263 565366 2 + 1104 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.65929.peg.950 CDS gi|480756736|gb|AQUY01000002.1| 565369 565989 1 + 621 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.65929.peg.951 CDS gi|480756736|gb|AQUY01000002.1| 566168 567460 2 + 1293 putative transport protein - none -
fig|6666666.65929.peg.952 CDS gi|480756736|gb|AQUY01000002.1| 567470 568105 2 + 636 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.65929.peg.953 CDS gi|480756736|gb|AQUY01000002.1| 568202 568933 2 + 732 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) / Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.65929.peg.954 CDS gi|480756736|gb|AQUY01000002.1| 568983 569798 3 + 816 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65929.peg.955 CDS gi|480756736|gb|AQUY01000002.1| 569802 570575 3 + 774 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.65929.peg.956 CDS gi|480756736|gb|AQUY01000002.1| 570575 570955 2 + 381 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis;
Zinc regulated enzymes
fig|6666666.65929.peg.957 CDS gi|480756736|gb|AQUY01000002.1| 572059 570956 -1 - 1104 hypothetical protein - none -
fig|6666666.65929.peg.958 CDS gi|480756736|gb|AQUY01000002.1| 572586 572233 -3 - 354 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein - none -
fig|6666666.65929.peg.959 CDS gi|480756736|gb|AQUY01000002.1| 572812 574350 1 + 1539 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65929.peg.960 CDS gi|480756736|gb|AQUY01000002.1| 574351 575028 1 + 678 Tryptophan-associated membrane protein - none -
fig|6666666.65929.peg.961 CDS gi|480756736|gb|AQUY01000002.1| 575369 575046 -2 - 324 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.65929.peg.962 CDS gi|480756736|gb|AQUY01000002.1| 575482 576525 1 + 1044 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.65929.peg.963 CDS gi|480756736|gb|AQUY01000002.1| 576660 577460 3 + 801 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65929.peg.964 CDS gi|480756736|gb|AQUY01000002.1| 577542 577429 -3 - 114 hypothetical protein - none -
fig|6666666.65929.peg.965 CDS gi|480756736|gb|AQUY01000002.1| 577579 578934 1 + 1356 Tryptophan synthase beta chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65929.peg.966 CDS gi|480756736|gb|AQUY01000002.1| 578934 579722 3 + 789 Tryptophan synthase alpha chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65929.peg.967 CDS gi|480756736|gb|AQUY01000002.1| 579765 580751 3 + 987 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.65929.peg.968 CDS gi|480756736|gb|AQUY01000002.1| 580846 582180 1 + 1335 Pyruvate kinase (EC 2.7.1.40) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65929.peg.969 CDS gi|480756736|gb|AQUY01000002.1| 582369 584975 3 + 2607 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.65929.peg.970 CDS gi|480756736|gb|AQUY01000002.1| 585150 586193 3 + 1044 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.65929.peg.971 CDS gi|480756736|gb|AQUY01000002.1| 587496 586222 -3 - 1275 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65929.peg.972 CDS gi|480756736|gb|AQUY01000002.1| 588849 587512 -3 - 1338 No significant database matches - none -
fig|6666666.65929.peg.973 CDS gi|480756736|gb|AQUY01000002.1| 588873 589256 3 + 384 hypothetical protein - none -
fig|6666666.65929.peg.974 CDS gi|480756736|gb|AQUY01000002.1| 589380 590723 3 + 1344 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.65929.peg.975 CDS gi|480756736|gb|AQUY01000002.1| 590754 591512 3 + 759 hypothetical protein - none -
fig|6666666.65929.peg.976 CDS gi|480756736|gb|AQUY01000002.1| 592325 591540 -2 - 786 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.977 CDS gi|480756736|gb|AQUY01000002.1| 593261 592326 -2 - 936 putative amino acid ABC transporter permease protein - none -
fig|6666666.65929.peg.978 CDS gi|480756736|gb|AQUY01000002.1| 594148 593261 -1 - 888 ABC-type amino acid transport system, secreted component - none -
fig|6666666.65929.peg.979 CDS gi|480756736|gb|AQUY01000002.1| 594425 595582 2 + 1158 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) Valine degradation
fig|6666666.65929.peg.980 CDS gi|480756736|gb|AQUY01000002.1| 599090 595617 -2 - 3474 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.65929.peg.981 CDS gi|480756736|gb|AQUY01000002.1| 603114 599839 -3 - 3276 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65929.peg.982 CDS gi|480756736|gb|AQUY01000002.1| 604362 603118 -3 - 1245 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65929.peg.983 CDS gi|480756736|gb|AQUY01000002.1| 606323 604362 -2 - 1962 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.65929.peg.984 CDS gi|480756736|gb|AQUY01000002.1| 606861 609584 3 + 2724 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.65929.peg.985 CDS gi|480756736|gb|AQUY01000002.1| 609698 611188 2 + 1491 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.65929.peg.986 CDS gi|480756736|gb|AQUY01000002.1| 612046 611192 -1 - 855 SAM-dependent methyltransferases - none -
fig|6666666.65929.peg.987 CDS gi|480756736|gb|AQUY01000002.1| 612203 613663 2 + 1461 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.65929.peg.988 CDS gi|480756736|gb|AQUY01000002.1| 614004 616076 3 + 2073 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.65929.peg.989 CDS gi|480756736|gb|AQUY01000002.1| 616189 616806 1 + 618 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.65929.peg.990 CDS gi|480756736|gb|AQUY01000002.1| 616838 618961 2 + 2124 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.65929.peg.991 CDS gi|480756736|gb|AQUY01000002.1| 619645 618983 -1 - 663 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.65929.peg.992 CDS gi|480756736|gb|AQUY01000002.1| 621536 619674 -2 - 1863 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.65929.peg.993 CDS gi|480756736|gb|AQUY01000002.1| 621650 622090 2 + 441 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.65929.peg.994 CDS gi|480756736|gb|AQUY01000002.1| 624465 622117 -3 - 2349 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.65929.peg.995 CDS gi|480756736|gb|AQUY01000002.1| 625300 624536 -1 - 765 hypothetical protein - none -
fig|6666666.65929.peg.996 CDS gi|480756736|gb|AQUY01000002.1| 625967 625350 -2 - 618 metallo-beta-lactamase superfamily protein - none -
fig|6666666.65929.peg.997 CDS gi|480756736|gb|AQUY01000002.1| 626131 628980 1 + 2850 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.65929.peg.998 CDS gi|480756736|gb|AQUY01000002.1| 629256 629513 3 + 258 hypothetical protein - none -
fig|6666666.65929.peg.999 CDS gi|480756736|gb|AQUY01000002.1| 629613 630161 3 + 549 hypothetical protein - none -
fig|6666666.65929.peg.1000 CDS gi|480756736|gb|AQUY01000002.1| 632025 630196 -3 - 1830 hypothetical protein - none -
fig|6666666.65929.peg.1001 CDS gi|480756736|gb|AQUY01000002.1| 632019 632273 3 + 255 hypothetical protein - none -
fig|6666666.65929.peg.1002 CDS gi|480756736|gb|AQUY01000002.1| 632504 632364 -2 - 141 hypothetical protein - none -
fig|6666666.65929.peg.1003 CDS gi|480756736|gb|AQUY01000002.1| 632758 633219 1 + 462 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.65929.peg.1004 CDS gi|480756736|gb|AQUY01000002.1| 633318 633512 3 + 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65929.peg.1005 CDS gi|480756736|gb|AQUY01000002.1| 633573 633956 3 + 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.65929.peg.1006 CDS gi|480756736|gb|AQUY01000002.1| 634066 634890 1 + 825 RNA methyltransferase, TrmH family - none -
fig|6666666.65929.peg.1007 CDS gi|480756736|gb|AQUY01000002.1| 636274 634934 -1 - 1341 FIG00546254: hypothetical protein - none -
fig|6666666.65929.peg.1008 CDS gi|480756736|gb|AQUY01000002.1| 636923 637429 2 + 507 hypothetical protein - none -
fig|6666666.65929.peg.1009 CDS gi|480756736|gb|AQUY01000002.1| 637495 639165 1 + 1671 PE family protein - none -
fig|6666666.65929.peg.1010 CDS gi|480756736|gb|AQUY01000002.1| 639290 640315 2 + 1026 hypothetical protein - none -
fig|6666666.65929.peg.1011 CDS gi|480756736|gb|AQUY01000002.1| 640443 641480 3 + 1038 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65929.peg.1012 CDS gi|480756736|gb|AQUY01000002.1| 641519 644008 2 + 2490 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.65929.peg.1013 CDS gi|480756736|gb|AQUY01000002.1| 644224 645144 1 + 921 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65929.peg.1014 CDS gi|480756736|gb|AQUY01000002.1| 645193 646389 1 + 1197 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.65929.peg.1015 CDS gi|480756736|gb|AQUY01000002.1| 646404 647297 3 + 894 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65929.peg.1016 CDS gi|480756736|gb|AQUY01000002.1| 647301 648620 3 + 1320 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65929.peg.1017 CDS gi|480756736|gb|AQUY01000002.1| 648656 649675 2 + 1020 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65929.peg.1018 CDS gi|480756736|gb|AQUY01000002.1| 649790 650227 2 + 438 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.65929.peg.1019 CDS gi|480756736|gb|AQUY01000002.1| 650293 651498 1 + 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65929.peg.1020 CDS gi|480756736|gb|AQUY01000002.1| 651495 652937 3 + 1443 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.65929.peg.1021 CDS gi|480756736|gb|AQUY01000002.1| 653067 654668 3 + 1602 hypothetical protein - none -
fig|6666666.65929.peg.1022 CDS gi|480756736|gb|AQUY01000002.1| 654923 655252 2 + 330 hypothetical protein - none -
fig|6666666.65929.peg.1023 CDS gi|480756736|gb|AQUY01000002.1| 655278 655445 3 + 168 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.65929.peg.1024 CDS gi|480756736|gb|AQUY01000002.1| 655641 656066 3 + 426 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.65929.peg.1025 CDS gi|480756736|gb|AQUY01000002.1| 656075 657394 2 + 1320 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.65929.peg.1026 CDS gi|480756742|gb|AQUY01000001.1| 13 750 1 + 738 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.65929.peg.1027 CDS gi|480756742|gb|AQUY01000001.1| 2039 774 -2 - 1266 Conserved hypothetical DNA-binding protein - none -
fig|6666666.65929.peg.1028 CDS gi|480756742|gb|AQUY01000001.1| 2885 2163 -2 - 723 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.65929.peg.1029 CDS gi|480756742|gb|AQUY01000001.1| 2938 3837 1 + 900 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.65929.peg.1030 CDS gi|480756742|gb|AQUY01000001.1| 3834 4286 3 + 453 Multimeric flavodoxin WrbA - none -
fig|6666666.65929.peg.1031 CDS gi|480756742|gb|AQUY01000001.1| 4311 5807 3 + 1497 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.65929.peg.1032 CDS gi|480756742|gb|AQUY01000001.1| 6014 6655 2 + 642 Aquaporin Z Osmoregulation
fig|6666666.65929.peg.1033 CDS gi|480756742|gb|AQUY01000001.1| 6741 7661 3 + 921 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.65929.peg.1034 CDS gi|480756742|gb|AQUY01000001.1| 8129 9400 2 + 1272 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.65929.peg.1035 CDS gi|480756742|gb|AQUY01000001.1| 9434 10066 2 + 633 No significant database matches - none -
fig|6666666.65929.peg.1036 CDS gi|480756742|gb|AQUY01000001.1| 10090 12780 1 + 2691 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.65929.peg.1037 CDS gi|480756742|gb|AQUY01000001.1| 12902 13216 2 + 315 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.65929.peg.1038 CDS gi|480756742|gb|AQUY01000001.1| 13219 13884 1 + 666 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.65929.peg.1039 CDS gi|480756742|gb|AQUY01000001.1| 14673 13918 -3 - 756 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.65929.peg.1040 CDS gi|480756742|gb|AQUY01000001.1| 16033 14675 -1 - 1359 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.65929.peg.1041 CDS gi|480756742|gb|AQUY01000001.1| 17111 16050 -2 - 1062 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.65929.peg.1042 CDS gi|480756742|gb|AQUY01000001.1| 18933 17140 -3 - 1794 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65929.peg.1043 CDS gi|480756742|gb|AQUY01000001.1| 19989 19168 -3 - 822 FIG00544278: hypothetical protein - none -
fig|6666666.65929.peg.1044 CDS gi|480756742|gb|AQUY01000001.1| 20134 21399 1 + 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65929.peg.1045 CDS gi|480756742|gb|AQUY01000001.1| 21466 22512 1 + 1047 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.65929.peg.1046 CDS gi|480756742|gb|AQUY01000001.1| 23184 22576 -3 - 609 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.65929.peg.1047 CDS gi|480756742|gb|AQUY01000001.1| 23839 23309 -1 - 531 potential surface-anchored protein - none -
fig|6666666.65929.peg.1048 CDS gi|480756742|gb|AQUY01000001.1| 24102 23977 -3 - 126 hypothetical protein - none -
fig|6666666.65929.peg.1049 CDS gi|480756742|gb|AQUY01000001.1| 24614 24276 -2 - 339 hypothetical protein - none -
fig|6666666.65929.peg.1050 CDS gi|480756742|gb|AQUY01000001.1| 24884 24615 -2 - 270 hypothetical protein - none -
fig|6666666.65929.peg.1051 CDS gi|480756742|gb|AQUY01000001.1| 25285 24887 -1 - 399 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.65929.peg.1052 CDS gi|480756742|gb|AQUY01000001.1| 26842 25286 -1 - 1557 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.65929.peg.1053 CDS gi|480756742|gb|AQUY01000001.1| 27279 26839 -3 - 441 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.65929.peg.1054 CDS gi|480756742|gb|AQUY01000001.1| 30014 27276 -2 - 2739 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.65929.peg.1055 CDS gi|480756742|gb|AQUY01000001.1| 30222 31748 3 + 1527 hypothetical protein - none -
fig|6666666.65929.peg.1056 CDS gi|480756742|gb|AQUY01000001.1| 32666 31794 -2 - 873 putative secreted protein - none -
fig|6666666.65929.peg.1057 CDS gi|480756742|gb|AQUY01000001.1| 32771 33238 2 + 468 Transamidase GatB domain protein - none -
fig|6666666.65929.peg.1058 CDS gi|480756742|gb|AQUY01000001.1| 35460 33235 -3 - 2226 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.65929.peg.1059 CDS gi|480756742|gb|AQUY01000001.1| 35616 35966 3 + 351 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65929.peg.1060 CDS gi|480756742|gb|AQUY01000001.1| 35992 36156 1 + 165 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65929.peg.1061 CDS gi|480756742|gb|AQUY01000001.1| 36160 36660 1 + 501 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.65929.peg.1062 CDS gi|480756742|gb|AQUY01000001.1| 36798 37505 3 + 708 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.65929.peg.1063 CDS gi|480756742|gb|AQUY01000001.1| 38294 37590 -2 - 705 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.65929.peg.1064 CDS gi|480756742|gb|AQUY01000001.1| 38606 39232 2 + 627 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.65929.peg.1065 CDS gi|480756742|gb|AQUY01000001.1| 39252 39896 3 + 645 hypothetical protein - none -
fig|6666666.65929.peg.1066 CDS gi|480756742|gb|AQUY01000001.1| 39967 40689 1 + 723 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65929.peg.1067 CDS gi|480756742|gb|AQUY01000001.1| 40704 41924 3 + 1221 putative serine protease - none -
fig|6666666.65929.peg.1068 CDS gi|480756742|gb|AQUY01000001.1| 42541 41921 -1 - 621 putative hydrolase - none -
fig|6666666.65929.peg.1069 CDS gi|480756742|gb|AQUY01000001.1| 43166 42645 -2 - 522 FIG00820727: hypothetical protein - none -
fig|6666666.65929.peg.1070 CDS gi|480756742|gb|AQUY01000001.1| 43244 44041 2 + 798 hypothetical protein - none -
fig|6666666.65929.peg.1071 CDS gi|480756742|gb|AQUY01000001.1| 44842 44081 -1 - 762 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65929.peg.1072 CDS gi|480756742|gb|AQUY01000001.1| 45640 45173 -1 - 468 Conserved integral membrane protein - none -
fig|6666666.65929.peg.1073 CDS gi|480756742|gb|AQUY01000001.1| 45870 45751 -3 - 120 hypothetical protein - none -
fig|6666666.65929.peg.1074 CDS gi|480756742|gb|AQUY01000001.1| 45851 46945 2 + 1095 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.65929.peg.1075 CDS gi|480756742|gb|AQUY01000001.1| 46942 48183 1 + 1242 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.65929.peg.1076 CDS gi|480756742|gb|AQUY01000001.1| 48297 49004 3 + 708 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.65929.peg.1077 CDS gi|480756742|gb|AQUY01000001.1| 49001 49645 2 + 645 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.65929.peg.1078 CDS gi|480756742|gb|AQUY01000001.1| 49801 50007 1 + 207 FIG043778: hypothetical protein CBSS-336982.3.peg.3874
fig|6666666.65929.peg.1079 CDS gi|480756742|gb|AQUY01000001.1| 50007 50336 3 + 330 hypothetical protein - none -
fig|6666666.65929.peg.1080 CDS gi|480756742|gb|AQUY01000001.1| 50336 50671 2 + 336 hypothetical protein - none -
fig|6666666.65929.peg.1081 CDS gi|480756742|gb|AQUY01000001.1| 50861 50682 -2 - 180 hypothetical protein - none -
fig|6666666.65929.peg.1082 CDS gi|480756742|gb|AQUY01000001.1| 53245 50858 -1 - 2388 FIG00545284: hypothetical protein - none -
fig|6666666.65929.peg.1083 CDS gi|480756742|gb|AQUY01000001.1| 53534 53737 2 + 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.65929.peg.1084 CDS gi|480756742|gb|AQUY01000001.1| 54035 57088 2 + 3054 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.65929.peg.1085 CDS gi|480756742|gb|AQUY01000001.1| 58633 57107 -1 - 1527 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.65929.peg.1086 CDS gi|480756742|gb|AQUY01000001.1| 58698 59951 3 + 1254 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.65929.peg.1087 CDS gi|480756742|gb|AQUY01000001.1| 60678 59965 -3 - 714 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.65929.peg.1088 CDS gi|480756742|gb|AQUY01000001.1| 61783 61013 -1 - 771 Integral membrane protein - none -
fig|6666666.65929.peg.1089 CDS gi|480756742|gb|AQUY01000001.1| 62113 61907 -1 - 207 hypothetical protein - none -
fig|6666666.65929.peg.1090 CDS gi|480756742|gb|AQUY01000001.1| 64409 62202 -2 - 2208 Putative membrane protein actII-3 - none -
fig|6666666.65929.peg.1091 CDS gi|480756742|gb|AQUY01000001.1| 64573 65148 1 + 576 Transcriptional regulator, TetR family - none -
fig|6666666.65929.peg.1092 CDS gi|480756742|gb|AQUY01000001.1| 65406 66209 3 + 804 hypothetical protein - none -
fig|6666666.65929.peg.1093 CDS gi|480756742|gb|AQUY01000001.1| 66484 67611 1 + 1128 FIG00547211: hypothetical protein - none -
fig|6666666.65929.peg.1094 CDS gi|480756742|gb|AQUY01000001.1| 67653 68591 3 + 939 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.65929.peg.1095 CDS gi|480756742|gb|AQUY01000001.1| 68938 68588 -1 - 351 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65929.peg.1096 CDS gi|480756742|gb|AQUY01000001.1| 69649 68939 -1 - 711 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65929.peg.1097 CDS gi|480756742|gb|AQUY01000001.1| 70437 69667 -3 - 771 putative glycosyltransferase - none -
fig|6666666.65929.peg.1098 CDS gi|480756742|gb|AQUY01000001.1| 71728 70550 -1 - 1179 FIG00548230: hypothetical protein - none -
fig|6666666.65929.peg.1099 CDS gi|480756742|gb|AQUY01000001.1| 73143 71764 -3 - 1380 aminopeptidase N - none -
fig|6666666.65929.peg.1100 CDS gi|480756742|gb|AQUY01000001.1| 75265 73175 -1 - 2091 Prolyl endopeptidase (EC 3.4.21.26) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.65929.peg.1101 CDS gi|480756742|gb|AQUY01000001.1| 76430 75330 -2 - 1101 surface layer protein A - none -
fig|6666666.65929.peg.1102 CDS gi|480756742|gb|AQUY01000001.1| 76479 76598 3 + 120 hypothetical protein - none -
fig|6666666.65929.peg.1103 CDS gi|480756742|gb|AQUY01000001.1| 76840 76962 1 + 123 hypothetical protein - none -
fig|6666666.65929.peg.1104 CDS gi|480756742|gb|AQUY01000001.1| 77110 78525 1 + 1416 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65929.peg.1105 CDS gi|480756742|gb|AQUY01000001.1| 80004 78577 -3 - 1428 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.65929.peg.1106 CDS gi|480756742|gb|AQUY01000001.1| 81455 80163 -2 - 1293 Isocitrate lyase (EC 4.1.3.1) Glyoxylate bypass;
Glyoxylate bypass cluster;
Serine-glyoxylate cycle
fig|6666666.65929.peg.1107 CDS gi|480756742|gb|AQUY01000001.1| 82017 84224 3 + 2208 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.65929.peg.1108 CDS gi|480756742|gb|AQUY01000001.1| 84393 85106 3 + 714 Beta-phosphoglucomutase (EC 5.4.2.6) Maltose and Maltodextrin Utilization;
Trehalose Uptake and Utilization
fig|6666666.65929.peg.1109 CDS gi|480756742|gb|AQUY01000001.1| 85107 87578 3 + 2472 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis;
Trehalose Uptake and Utilization
fig|6666666.65929.peg.1110 CDS gi|480756742|gb|AQUY01000001.1| 87790 88533 1 + 744 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.65929.peg.1111 CDS gi|480756742|gb|AQUY01000001.1| 88554 90566 3 + 2013 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65929.peg.1112 CDS gi|480756742|gb|AQUY01000001.1| 90566 91315 2 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.65929.peg.1113 CDS gi|480756742|gb|AQUY01000001.1| 91436 91651 2 + 216 hypothetical protein - none -
fig|6666666.65929.peg.1114 CDS gi|480756742|gb|AQUY01000001.1| 91954 93657 1 + 1704 hypothetical protein - none -
fig|6666666.65929.peg.1115 CDS gi|480756742|gb|AQUY01000001.1| 93982 93776 -1 - 207 hypothetical protein - none -
fig|6666666.65929.peg.1116 CDS gi|480756742|gb|AQUY01000001.1| 94094 95410 2 + 1317 FIG00544632: hypothetical protein - none -
fig|6666666.65929.peg.1117 CDS gi|480756742|gb|AQUY01000001.1| 95443 96324 1 + 882 hypothetical protein - none -
fig|6666666.65929.peg.1118 CDS gi|480756742|gb|AQUY01000001.1| 96321 96629 3 + 309 hypothetical membrane protein - none -
fig|6666666.65929.peg.1119 CDS gi|480756742|gb|AQUY01000001.1| 97538 96633 -2 - 906 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.65929.peg.1120 CDS gi|480756742|gb|AQUY01000001.1| 97584 98324 3 + 741 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.65929.peg.1121 CDS gi|480756742|gb|AQUY01000001.1| 99060 98305 -3 - 756 hypothetical protein - none -
fig|6666666.65929.peg.1122 CDS gi|480756742|gb|AQUY01000001.1| 100191 99376 -3 - 816 Methylase of polypeptide chain release factors - none -
fig|6666666.65929.peg.1123 CDS gi|480756742|gb|AQUY01000001.1| 100689 100246 -3 - 444 hypothetical protein - none -
fig|6666666.65929.peg.1124 CDS gi|480756742|gb|AQUY01000001.1| 100797 101879 3 + 1083 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65929.peg.1125 CDS gi|480756742|gb|AQUY01000001.1| 103663 101930 -1 - 1734 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.1126 CDS gi|480756742|gb|AQUY01000001.1| 103758 105047 3 + 1290 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.65929.peg.1127 CDS gi|480756742|gb|AQUY01000001.1| 105050 106336 2 + 1287 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.65929.peg.1128 CDS gi|480756742|gb|AQUY01000001.1| 106452 107615 3 + 1164 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65929.peg.1129 CDS gi|480756742|gb|AQUY01000001.1| 107623 108312 1 + 690 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.65929.peg.1130 CDS gi|480756742|gb|AQUY01000001.1| 109310 108294 -2 - 1017 FIG00543972: hypothetical protein - none -
fig|6666666.65929.peg.1131 CDS gi|480756742|gb|AQUY01000001.1| 109366 110271 1 + 906 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65929.peg.1132 CDS gi|480756742|gb|AQUY01000001.1| 110329 111549 1 + 1221 hypothetical protein - none -
fig|6666666.65929.peg.1133 CDS gi|480756742|gb|AQUY01000001.1| 111631 112431 1 + 801 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.65929.peg.1134 CDS gi|480756742|gb|AQUY01000001.1| 112743 112934 3 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.65929.peg.1135 CDS gi|480756742|gb|AQUY01000001.1| 113037 113219 3 + 183 hypothetical protein - none -
fig|6666666.65929.peg.1136 CDS gi|480756742|gb|AQUY01000001.1| 113407 115383 1 + 1977 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.65929.peg.1137 CDS gi|480756742|gb|AQUY01000001.1| 115542 115399 -3 - 144 hypothetical protein - none -
fig|6666666.65929.peg.1138 CDS gi|480756742|gb|AQUY01000001.1| 115724 116620 2 + 897 hypothetical protein - none -
fig|6666666.65929.peg.1139 CDS gi|480756742|gb|AQUY01000001.1| 116656 117015 1 + 360 hypothetical protein - none -
fig|6666666.65929.peg.1140 CDS gi|480756742|gb|AQUY01000001.1| 117100 118065 1 + 966 hypothetical protein - none -
fig|6666666.65929.peg.1141 CDS gi|480756742|gb|AQUY01000001.1| 118093 119505 1 + 1413 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.65929.peg.1142 CDS gi|480756742|gb|AQUY01000001.1| 120558 119509 -3 - 1050 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.65929.peg.1143 CDS gi|480756742|gb|AQUY01000001.1| 120831 120974 3 + 144 Glutaredoxin-like domain protein - none -
fig|6666666.65929.peg.1144 CDS gi|480756742|gb|AQUY01000001.1| 121187 122584 2 + 1398 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1145 CDS gi|480756742|gb|AQUY01000001.1| 122584 123528 1 + 945 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1146 CDS gi|480756742|gb|AQUY01000001.1| 123611 125314 2 + 1704 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1147 CDS gi|480756742|gb|AQUY01000001.1| 125347 126381 1 + 1035 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.65929.peg.1148 CDS gi|480756742|gb|AQUY01000001.1| 126381 127034 3 + 654 hypothetical protein - none -
fig|6666666.65929.peg.1149 CDS gi|480756742|gb|AQUY01000001.1| 127046 127510 2 + 465 hypothetical membrane protein - none -
fig|6666666.65929.peg.1150 CDS gi|480756742|gb|AQUY01000001.1| 127514 130093 2 + 2580 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.65929.peg.1151 CDS gi|480756742|gb|AQUY01000001.1| 130171 131499 1 + 1329 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1152 CDS gi|480756742|gb|AQUY01000001.1| 131506 132129 1 + 624 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.65929.peg.1153 CDS gi|480756742|gb|AQUY01000001.1| 132139 132759 1 + 621 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65929.peg.1154 CDS gi|480756742|gb|AQUY01000001.1| 132776 133576 2 + 801 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.65929.peg.1155 CDS gi|480756742|gb|AQUY01000001.1| 133613 135310 2 + 1698 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65929.peg.1156 CDS gi|480756742|gb|AQUY01000001.1| 135464 136558 2 + 1095 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.65929.peg.1157 CDS gi|480756742|gb|AQUY01000001.1| 136596 137591 3 + 996 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65929.peg.1158 CDS gi|480756742|gb|AQUY01000001.1| 137612 138292 2 + 681 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65929.peg.1159 CDS gi|480756742|gb|AQUY01000001.1| 138342 139217 3 + 876 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65929.peg.1160 CDS gi|480756742|gb|AQUY01000001.1| 140385 139924 -3 - 462 hypothetical protein - none -
fig|6666666.65929.peg.1161 CDS gi|480756742|gb|AQUY01000001.1| 140427 140843 3 + 417 hypothetical protein - none -
fig|6666666.65929.peg.1162 CDS gi|480756742|gb|AQUY01000001.1| 141887 140880 -2 - 1008 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.65929.peg.1163 CDS gi|480756742|gb|AQUY01000001.1| 142087 142836 1 + 750 FIG00544751: hypothetical protein - none -
fig|6666666.65929.peg.1164 CDS gi|480756742|gb|AQUY01000001.1| 143226 143089 -3 - 138 hypothetical protein - none -
fig|6666666.65929.peg.1165 CDS gi|480756742|gb|AQUY01000001.1| 144679 143435 -1 - 1245 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65929.peg.1166 CDS gi|480756742|gb|AQUY01000001.1| 145154 144834 -2 - 321 hypothetical protein - none -
fig|6666666.65929.peg.1167 CDS gi|480756742|gb|AQUY01000001.1| 146608 145634 -1 - 975 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65929.peg.1168 CDS gi|480756742|gb|AQUY01000001.1| 147879 146629 -3 - 1251 hypothetical protein - none -
fig|6666666.65929.peg.1169 CDS gi|480756742|gb|AQUY01000001.1| 148837 150018 1 + 1182 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.65929.peg.1170 CDS gi|480756742|gb|AQUY01000001.1| 150096 151934 3 + 1839 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65929.peg.1171 CDS gi|480756742|gb|AQUY01000001.1| 151968 152378 3 + 411 possible membrane protein - none -
fig|6666666.65929.peg.1172 CDS gi|480756742|gb|AQUY01000001.1| 152628 153797 3 + 1170 Glycosyltransferase - none -
fig|6666666.65929.peg.1173 CDS gi|480756742|gb|AQUY01000001.1| 153900 154544 3 + 645 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.65929.peg.1174 CDS gi|480756742|gb|AQUY01000001.1| 155902 154661 -1 - 1242 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.65929.peg.1175 CDS gi|480756742|gb|AQUY01000001.1| 156080 157117 2 + 1038 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.65929.peg.1176 CDS gi|480756742|gb|AQUY01000001.1| 159085 159411 1 + 327 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.65929.peg.1177 CDS gi|480756742|gb|AQUY01000001.1| 159517 160443 1 + 927 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.65929.peg.1178 CDS gi|480756742|gb|AQUY01000001.1| 160632 160519 -3 - 114 hypothetical protein - none -
fig|6666666.65929.peg.1179 CDS gi|480756742|gb|AQUY01000001.1| 160739 161173 2 + 435 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65929.peg.1180 CDS gi|480756742|gb|AQUY01000001.1| 161282 161986 2 + 705 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65929.peg.1181 CDS gi|480756742|gb|AQUY01000001.1| 162878 164746 2 + 1869 Cadmium-transporting ATPase (EC 3.6.3.3) Cobalt-zinc-cadmium resistance
fig|6666666.65929.peg.1182 CDS gi|480756742|gb|AQUY01000001.1| 165111 165626 3 + 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65929.peg.1183 CDS gi|480756742|gb|AQUY01000001.1| 165706 166092 1 + 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.65929.peg.1184 CDS gi|480756742|gb|AQUY01000001.1| 166127 166333 2 + 207 hypothetical protein - none -
fig|6666666.65929.peg.1185 CDS gi|480756742|gb|AQUY01000001.1| 167379 166798 -3 - 582 hypothetical protein - none -
fig|6666666.65929.peg.1186 CDS gi|480756742|gb|AQUY01000001.1| 167479 168459 1 + 981 hypothetical protein - none -
fig|6666666.65929.peg.1187 CDS gi|480756742|gb|AQUY01000001.1| 168878 172348 2 + 3471 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65929.peg.1188 CDS gi|480756742|gb|AQUY01000001.1| 172491 176522 3 + 4032 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.65929.peg.1189 CDS gi|480756742|gb|AQUY01000001.1| 177214 176696 -1 - 519 hypothetical protein - none -
fig|6666666.65929.peg.1190 CDS gi|480756742|gb|AQUY01000001.1| 177578 177763 2 + 186 hypothetical protein - none -
fig|6666666.65929.peg.1191 CDS gi|480756742|gb|AQUY01000001.1| 178593 177874 -3 - 720 hypothetical protein - none -
fig|6666666.65929.peg.1192 CDS gi|480756742|gb|AQUY01000001.1| 178786 179598 1 + 813 Putative transcriptional regulator - none -
fig|6666666.65929.peg.1193 CDS gi|480756742|gb|AQUY01000001.1| 179731 181164 1 + 1434 metabolite transporter, MFS superfamily - none -
fig|6666666.65929.peg.1194 CDS gi|480756742|gb|AQUY01000001.1| 182067 181276 -3 - 792 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65929.peg.1195 CDS gi|480756742|gb|AQUY01000001.1| 183871 182180 -1 - 1692 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.65929.peg.1196 CDS gi|480756742|gb|AQUY01000001.1| 183827 184012 2 + 186 hypothetical protein - none -
fig|6666666.65929.peg.1197 CDS gi|480756742|gb|AQUY01000001.1| 184115 184750 2 + 636 hypothetical protein - none -
fig|6666666.65929.peg.1198 CDS gi|480756742|gb|AQUY01000001.1| 184753 187581 1 + 2829 hypothetical protein - none -
fig|6666666.65929.peg.1199 CDS gi|480756742|gb|AQUY01000001.1| 187631 191263 2 + 3633 hypothetical protein - none -
fig|6666666.65929.peg.1200 CDS gi|480756742|gb|AQUY01000001.1| 191277 194003 3 + 2727 hypothetical protein - none -
fig|6666666.65929.peg.1201 CDS gi|480756742|gb|AQUY01000001.1| 194010 196181 3 + 2172 hypothetical protein - none -
fig|6666666.65929.peg.1202 CDS gi|480756742|gb|AQUY01000001.1| 196181 197761 2 + 1581 hypothetical protein - none -
fig|6666666.65929.peg.1203 CDS gi|480756742|gb|AQUY01000001.1| 197785 198735 1 + 951 hypothetical protein - none -
fig|6666666.65929.peg.1204 CDS gi|480756742|gb|AQUY01000001.1| 198728 199795 2 + 1068 FIG00549495: hypothetical protein - none -
fig|6666666.65929.peg.1205 CDS gi|480756742|gb|AQUY01000001.1| 200113 200448 1 + 336 hypothetical protein - none -
fig|6666666.65929.peg.1206 CDS gi|480756742|gb|AQUY01000001.1| 202195 200498 -1 - 1698 hypothetical protein - none -
fig|6666666.65929.peg.1207 CDS gi|480756742|gb|AQUY01000001.1| 202449 202820 3 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65929.peg.1208 CDS gi|480756742|gb|AQUY01000001.1| 202824 203297 3 + 474 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.65929.peg.1209 CDS gi|480756742|gb|AQUY01000001.1| 203426 205579 2 + 2154 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.65929.peg.1210 CDS gi|480756742|gb|AQUY01000001.1| 205890 207080 3 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.65929.peg.1211 CDS gi|480756742|gb|AQUY01000001.1| 207741 207175 -3 - 567 possible membrane protein - none -
fig|6666666.65929.peg.1212 CDS gi|480756742|gb|AQUY01000001.1| 208268 207738 -2 - 531 hypothetical protein - none -
fig|6666666.65929.peg.1213 CDS gi|480756742|gb|AQUY01000001.1| 208870 208370 -1 - 501 hypothetical protein - none -
fig|6666666.65929.peg.1214 CDS gi|480756742|gb|AQUY01000001.1| 209100 208870 -3 - 231 hypothetical protein - none -
fig|6666666.65929.peg.1215 CDS gi|480756742|gb|AQUY01000001.1| 209459 209097 -2 - 363 hypothetical protein - none -
fig|6666666.65929.peg.1216 CDS gi|480756742|gb|AQUY01000001.1| 209805 209452 -3 - 354 hypothetical protein - none -
fig|6666666.65929.peg.1217 CDS gi|480756742|gb|AQUY01000001.1| 210234 209815 -3 - 420 Alkaline shock protein 23 - none -
fig|6666666.65929.peg.1218 CDS gi|480756742|gb|AQUY01000001.1| 210770 211075 2 + 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.65929.peg.1219 CDS gi|480756742|gb|AQUY01000001.1| 211106 211762 2 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.65929.peg.1220 CDS gi|480756742|gb|AQUY01000001.1| 211759 212412 1 + 654 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.65929.peg.1221 CDS gi|480756742|gb|AQUY01000001.1| 212412 212717 3 + 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.65929.peg.1222 CDS gi|480756742|gb|AQUY01000001.1| 212750 213592 2 + 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.65929.peg.1223 CDS gi|480756742|gb|AQUY01000001.1| 213608 213886 2 + 279 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.65929.peg.1224 CDS gi|480756742|gb|AQUY01000001.1| 213890 214252 2 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.65929.peg.1225 CDS gi|480756742|gb|AQUY01000001.1| 214252 215001 1 + 750 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.65929.peg.1226 CDS gi|480756742|gb|AQUY01000001.1| 215004 215420 3 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.65929.peg.1227 CDS gi|480756742|gb|AQUY01000001.1| 215420 215653 2 + 234 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.65929.peg.1228 CDS gi|480756742|gb|AQUY01000001.1| 215665 215934 1 + 270 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.65929.peg.1229 CDS gi|480756742|gb|AQUY01000001.1| 216871 216065 -1 - 807 Siderophore-interacting protein - none -
fig|6666666.65929.peg.1230 CDS gi|480756742|gb|AQUY01000001.1| 216987 217931 3 + 945 putative iron ABC transport system, solute-binding protein - none -
fig|6666666.65929.peg.1231 CDS gi|480756742|gb|AQUY01000001.1| 217928 218941 2 + 1014 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.65929.peg.1232 CDS gi|480756742|gb|AQUY01000001.1| 218986 219987 1 + 1002 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.65929.peg.1233 CDS gi|480756742|gb|AQUY01000001.1| 219978 220766 3 + 789 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.65929.peg.1234 CDS gi|480756742|gb|AQUY01000001.1| 221263 220763 -1 - 501 conserved hypothetical protein - none -
fig|6666666.65929.peg.1235 CDS gi|480756742|gb|AQUY01000001.1| 222482 221340 -2 - 1143 hypothetical protein - none -
fig|6666666.65929.peg.1236 CDS gi|480756742|gb|AQUY01000001.1| 222799 223167 1 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.65929.peg.1237 CDS gi|480756742|gb|AQUY01000001.1| 223168 223482 1 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.65929.peg.1238 CDS gi|480756742|gb|AQUY01000001.1| 223485 224075 3 + 591 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.65929.peg.1239 CDS gi|480756742|gb|AQUY01000001.1| 224775 224227 -3 - 549 hypothetical protein - none -
fig|6666666.65929.peg.1240 CDS gi|480756742|gb|AQUY01000001.1| 226104 224788 -3 - 1317 hypothetical protein - none -
fig|6666666.65929.peg.1241 CDS gi|480756742|gb|AQUY01000001.1| 227987 226101 -2 - 1887 hypothetical protein - none -
fig|6666666.65929.peg.1242 CDS gi|480756742|gb|AQUY01000001.1| 228907 229305 1 + 399 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.65929.peg.1243 CDS gi|480756742|gb|AQUY01000001.1| 229318 229854 1 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.65929.peg.1244 CDS gi|480756742|gb|AQUY01000001.1| 229854 230258 3 + 405 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.65929.peg.1245 CDS gi|480756742|gb|AQUY01000001.1| 230305 230943 1 + 639 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.65929.peg.1246 CDS gi|480756742|gb|AQUY01000001.1| 230947 231132 1 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.65929.peg.1247 CDS gi|480756742|gb|AQUY01000001.1| 231139 231624 1 + 486 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.65929.peg.1248 CDS gi|480756742|gb|AQUY01000001.1| 231835 233166 1 + 1332 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.65929.peg.1249 CDS gi|480756742|gb|AQUY01000001.1| 233166 233711 3 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.65929.peg.1250 CDS gi|480756742|gb|AQUY01000001.1| 233753 234598 2 + 846 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65929.peg.1251 CDS gi|480756742|gb|AQUY01000001.1| 234745 234966 1 + 222 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.65929.peg.1252 CDS gi|480756742|gb|AQUY01000001.1| 235180 235548 1 + 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.65929.peg.1253 CDS gi|480756742|gb|AQUY01000001.1| 235552 235956 1 + 405 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.65929.peg.1254 CDS gi|480756742|gb|AQUY01000001.1| 235979 236584 2 + 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.65929.peg.1255 CDS gi|480756742|gb|AQUY01000001.1| 236686 237699 1 + 1014 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.65929.peg.1256 CDS gi|480756742|gb|AQUY01000001.1| 237767 238321 2 + 555 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.65929.peg.1257 CDS gi|480756742|gb|AQUY01000001.1| 238342 239265 1 + 924 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.65929.peg.1258 CDS gi|480756742|gb|AQUY01000001.1| 239318 241525 2 + 2208 hypothetical protein - none -
fig|6666666.65929.peg.1259 CDS gi|480756742|gb|AQUY01000001.1| 242455 241580 -1 - 876 putative secreted hydrolase - none -
fig|6666666.65929.peg.1260 CDS gi|480756742|gb|AQUY01000001.1| 243577 242471 -1 - 1107 hypothetical protein - none -
fig|6666666.65929.peg.1261 CDS gi|480756742|gb|AQUY01000001.1| 243789 245081 3 + 1293 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1262 CDS gi|480756742|gb|AQUY01000001.1| 246114 245035 -3 - 1080 subtilisin-like serine protease - none -
fig|6666666.65929.peg.1263 CDS gi|480756742|gb|AQUY01000001.1| 247658 246327 -2 - 1332 hypothetical protein - none -
fig|6666666.65929.peg.1264 CDS gi|480756742|gb|AQUY01000001.1| 247651 247788 1 + 138 hypothetical protein - none -
fig|6666666.65929.peg.1265 CDS gi|480756742|gb|AQUY01000001.1| 249405 247813 -3 - 1593 hypothetical protein - none -
fig|6666666.65929.peg.1266 CDS gi|480756742|gb|AQUY01000001.1| 250241 249405 -2 - 837 putative ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.1267 CDS gi|480756742|gb|AQUY01000001.1| 250420 254292 1 + 3873 FtsK/SpoIIIE family protein - none -
fig|6666666.65929.peg.1268 CDS gi|480756742|gb|AQUY01000001.1| 254289 255806 3 + 1518 hypothetical protein - none -
fig|6666666.65929.peg.1269 CDS gi|480756742|gb|AQUY01000001.1| 255935 256249 2 + 315 hypothetical protein - none -
fig|6666666.65929.peg.1270 CDS gi|480756742|gb|AQUY01000001.1| 256302 256592 3 + 291 hypothetical protein - none -
fig|6666666.65929.peg.1271 CDS gi|480756742|gb|AQUY01000001.1| 256829 257272 2 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.65929.peg.1272 CDS gi|480756742|gb|AQUY01000001.1| 257269 257844 1 + 576 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.65929.peg.1273 CDS gi|480756742|gb|AQUY01000001.1| 257995 259311 1 + 1317 Phosphoglucosamine mutase (EC 5.4.2.10) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65929.peg.1274 CDS gi|480756742|gb|AQUY01000001.1| 259429 259734 1 + 306 hypothetical protein - none -
fig|6666666.65929.peg.1275 CDS gi|480756742|gb|AQUY01000001.1| 259734 261158 3 + 1425 hypothetical protein - none -
fig|6666666.65929.peg.1276 CDS gi|480756742|gb|AQUY01000001.1| 261155 261460 2 + 306 hypothetical protein - none -
fig|6666666.65929.peg.1277 CDS gi|480756742|gb|AQUY01000001.1| 261526 261903 1 + 378 hypothetical protein - none -
fig|6666666.65929.peg.1278 CDS gi|480756742|gb|AQUY01000001.1| 261913 262467 1 + 555 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.65929.peg.1279 CDS gi|480756742|gb|AQUY01000001.1| 264682 262478 -1 - 2205 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.65929.peg.1280 CDS gi|480756742|gb|AQUY01000001.1| 266262 264829 -3 - 1434 ISONIAZID INDUCTIBLE GENE PROTEIN INIC - none -
fig|6666666.65929.peg.1281 CDS gi|480756742|gb|AQUY01000001.1| 268061 266262 -2 - 1800 hypothetical protein - none -
fig|6666666.65929.peg.1282 CDS gi|480756742|gb|AQUY01000001.1| 268500 269621 3 + 1122 hypothetical protein - none -
fig|6666666.65929.peg.1283 CDS gi|480756742|gb|AQUY01000001.1| 270589 269750 -1 - 840 FIG00996653: hypothetical protein - none -
fig|6666666.65929.peg.1284 CDS gi|480756742|gb|AQUY01000001.1| 270647 272533 2 + 1887 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65929.peg.1285 CDS gi|480756742|gb|AQUY01000001.1| 272608 274395 1 + 1788 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.65929.peg.1286 CDS gi|480756742|gb|AQUY01000001.1| 274399 276066 1 + 1668 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65929.peg.1287 CDS gi|480756742|gb|AQUY01000001.1| 276124 276840 1 + 717 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.65929.peg.1288 CDS gi|480756742|gb|AQUY01000001.1| 276841 277335 1 + 495 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.65929.peg.1289 CDS gi|480756742|gb|AQUY01000001.1| 277335 278411 3 + 1077 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.65929.peg.1290 CDS gi|480756742|gb|AQUY01000001.1| 278519 278953 2 + 435 hypothetical protein - none -
fig|6666666.65929.peg.1291 CDS gi|480756742|gb|AQUY01000001.1| 279139 279438 1 + 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.65929.peg.1292 CDS gi|480756742|gb|AQUY01000001.1| 279453 281072 3 + 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.65929.peg.1293 CDS gi|480756742|gb|AQUY01000001.1| 281443 281147 -1 - 297 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.65929.peg.1294 CDS gi|480756742|gb|AQUY01000001.1| 281693 282250 2 + 558 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.65929.peg.1295 CDS gi|480756742|gb|AQUY01000001.1| 282335 283252 2 + 918 hypothetical protein - none -
fig|6666666.65929.peg.1296 CDS gi|480756742|gb|AQUY01000001.1| 283681 283253 -1 - 429 hypothetical protein - none -
fig|6666666.65929.peg.1297 CDS gi|480756742|gb|AQUY01000001.1| 283778 285307 2 + 1530 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65929.peg.1298 CDS gi|480756742|gb|AQUY01000001.1| 285347 286492 2 + 1146 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.65929.peg.1299 CDS gi|480756742|gb|AQUY01000001.1| 286550 288274 2 + 1725 Cholesterol oxidase (EC 1.1.3.6) - none -
fig|6666666.65929.peg.1300 CDS gi|480756742|gb|AQUY01000001.1| 288302 289870 2 + 1569 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.65929.peg.1301 CDS gi|480756742|gb|AQUY01000001.1| 289880 290200 2 + 321 hypothetical protein - none -
fig|6666666.65929.peg.1302 CDS gi|480756742|gb|AQUY01000001.1| 290451 291308 3 + 858 hypothetical protein - none -
fig|6666666.65929.peg.1303 CDS gi|480756742|gb|AQUY01000001.1| 291314 292981 2 + 1668 DNA polymerase IV-like protein ImuB DNA repair, bacterial;
DNA replication strays
fig|6666666.65929.peg.1304 CDS gi|480756742|gb|AQUY01000001.1| 293346 293029 -3 - 318 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.65929.peg.1305 CDS gi|480756742|gb|AQUY01000001.1| 294086 293454 -2 - 633 No significant database matches - none -
fig|6666666.65929.peg.1306 CDS gi|480756742|gb|AQUY01000001.1| 294301 295245 1 + 945 FIG00546271: hypothetical protein - none -
fig|6666666.65929.peg.1307 CDS gi|480756742|gb|AQUY01000001.1| 296368 295643 -1 - 726 Methionine ABC transporter permease protein Methionine Biosynthesis
fig|6666666.65929.peg.1308 CDS gi|480756742|gb|AQUY01000001.1| 297441 296365 -3 - 1077 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.65929.peg.1309 CDS gi|480756742|gb|AQUY01000001.1| 298307 297438 -2 - 870 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.65929.peg.1310 CDS gi|480756742|gb|AQUY01000001.1| 298592 301735 2 + 3144 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.65929.peg.1311 CDS gi|480756742|gb|AQUY01000001.1| 302327 301752 -2 - 576 hypothetical protein - none -
fig|6666666.65929.peg.1312 CDS gi|480756742|gb|AQUY01000001.1| 302457 302894 3 + 438 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.65929.peg.1313 CDS gi|480756742|gb|AQUY01000001.1| 304802 304080 -2 - 723 hypothetical protein - none -
fig|6666666.65929.peg.1314 CDS gi|480756742|gb|AQUY01000001.1| 307319 304851 -2 - 2469 monooxygenase, flavin-binding family - none -
fig|6666666.65929.peg.1315 CDS gi|480756742|gb|AQUY01000001.1| 307393 308250 1 + 858 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.65929.peg.1316 CDS gi|480756742|gb|AQUY01000001.1| 308792 308247 -2 - 546 hypothetical protein - none -
fig|6666666.65929.peg.1317 CDS gi|480756742|gb|AQUY01000001.1| 308956 310707 1 + 1752 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.65929.peg.1318 CDS gi|480756742|gb|AQUY01000001.1| 310956 310732 -3 - 225 hypothetical protein - none -
fig|6666666.65929.peg.1319 CDS gi|480756742|gb|AQUY01000001.1| 313855 310991 -1 - 2865 putative helicase - none -
fig|6666666.65929.peg.1320 CDS gi|480756742|gb|AQUY01000001.1| 316094 313938 -2 - 2157 putative helicase - none -
fig|6666666.65929.peg.1321 CDS gi|480756742|gb|AQUY01000001.1| 316697 316158 -2 - 540 No significant database matches - none -
fig|6666666.65929.peg.1322 CDS gi|480756742|gb|AQUY01000001.1| 318127 316781 -1 - 1347 hypothetical protein - none -
fig|6666666.65929.peg.1323 CDS gi|480756742|gb|AQUY01000001.1| 318369 319469 3 + 1101 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.65929.peg.1324 CDS gi|480756742|gb|AQUY01000001.1| 319511 320386 2 + 876 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.65929.peg.1325 CDS gi|480756742|gb|AQUY01000001.1| 320376 321263 3 + 888 ABC-3 protein - none -
fig|6666666.65929.peg.1326 CDS gi|480756742|gb|AQUY01000001.1| 321256 322095 1 + 840 FIG00356309: hypothetical protein - none -
fig|6666666.65929.peg.1327 CDS gi|480756742|gb|AQUY01000001.1| 322106 322780 2 + 675 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.65929.peg.1328 CDS gi|480756742|gb|AQUY01000001.1| 322817 323671 2 + 855 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.65929.peg.1329 CDS gi|480756742|gb|AQUY01000001.1| 323681 324031 2 + 351 hypothetical protein - none -
fig|6666666.65929.peg.1330 CDS gi|480756742|gb|AQUY01000001.1| 325138 324038 -1 - 1101 hypothetical protein - none -
fig|6666666.65929.peg.1331 CDS gi|480756742|gb|AQUY01000001.1| 326301 325162 -3 - 1140 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.65929.peg.1332 CDS gi|480756742|gb|AQUY01000001.1| 326296 326436 1 + 141 hypothetical protein - none -
fig|6666666.65929.peg.1333 CDS gi|480756742|gb|AQUY01000001.1| 327755 326409 -2 - 1347 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65929.peg.1334 CDS gi|480756742|gb|AQUY01000001.1| 328163 328008 -2 - 156 hypothetical protein - none -
fig|6666666.65929.peg.1335 CDS gi|480756742|gb|AQUY01000001.1| 328219 329403 1 + 1185 major facilitator family transporter - none -
fig|6666666.65929.peg.1336 CDS gi|480756742|gb|AQUY01000001.1| 329680 330651 1 + 972 Esterase/lipase - none -
fig|6666666.65929.peg.1337 CDS gi|480756742|gb|AQUY01000001.1| 332971 330749 -1 - 2223 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.65929.peg.1338 CDS gi|480756742|gb|AQUY01000001.1| 334876 333227 -1 - 1650 hypothetical protein - none -
fig|6666666.65929.peg.1339 CDS gi|480756742|gb|AQUY01000001.1| 335916 335026 -3 - 891 hypothetical protein - none -
fig|6666666.65929.peg.1340 CDS gi|480756742|gb|AQUY01000001.1| 336190 337716 1 + 1527 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.1341 CDS gi|480756742|gb|AQUY01000001.1| 337750 338643 1 + 894 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.65929.peg.1342 CDS gi|480756742|gb|AQUY01000001.1| 338647 339702 1 + 1056 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.65929.peg.1343 CDS gi|480756742|gb|AQUY01000001.1| 339769 340860 1 + 1092 putative membrane protein - none -
fig|6666666.65929.peg.1344 CDS gi|480756742|gb|AQUY01000001.1| 342211 340877 -1 - 1335 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.1345 CDS gi|480756742|gb|AQUY01000001.1| 342296 343480 2 + 1185 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.65929.peg.1346 CDS gi|480756742|gb|AQUY01000001.1| 344791 343526 -1 - 1266 FIG026501: hypothetical protein - none -
fig|6666666.65929.peg.1347 CDS gi|480756742|gb|AQUY01000001.1| 345768 344857 -3 - 912 FIG00544549: hypothetical protein - none -
fig|6666666.65929.peg.1348 CDS gi|480756742|gb|AQUY01000001.1| 346085 345768 -2 - 318 hypothetical protein - none -
fig|6666666.65929.peg.1349 CDS gi|480756742|gb|AQUY01000001.1| 346186 346821 1 + 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.65929.peg.1350 CDS gi|480756742|gb|AQUY01000001.1| 346841 348061 2 + 1221 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.65929.peg.1351 CDS gi|480756742|gb|AQUY01000001.1| 350658 348118 -3 - 2541 hypothetical protein - none -
fig|6666666.65929.peg.1352 CDS gi|480756742|gb|AQUY01000001.1| 351917 350655 -2 - 1263 hypothetical protein - none -
fig|6666666.65929.peg.1353 CDS gi|480756742|gb|AQUY01000001.1| 352150 353559 1 + 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.65929.peg.1354 CDS gi|480756742|gb|AQUY01000001.1| 355076 353583 -2 - 1494 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.1355 CDS gi|480756742|gb|AQUY01000001.1| 355298 356344 2 + 1047 putative polyhydroxybutyrate depolymerase - none -
fig|6666666.65929.peg.1356 CDS gi|480756742|gb|AQUY01000001.1| 356933 356409 -2 - 525 No significant database matches - none -
fig|6666666.65929.peg.1357 CDS gi|480756742|gb|AQUY01000001.1| 358742 356970 -2 - 1773 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.1358 CDS gi|480756742|gb|AQUY01000001.1| 359891 358992 -2 - 900 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.65929.peg.1359 CDS gi|480756742|gb|AQUY01000001.1| 360177 361241 3 + 1065 FIG00548218: hypothetical protein - none -
fig|6666666.65929.peg.1360 CDS gi|480756742|gb|AQUY01000001.1| 361297 362493 1 + 1197 Valine--pyruvate aminotransferase (EC 2.6.1.66) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.65929.peg.1361 CDS gi|480756742|gb|AQUY01000001.1| 363174 362494 -3 - 681 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65929.peg.1362 CDS gi|480756742|gb|AQUY01000001.1| 363446 363183 -2 - 264 hypothetical protein - none -
fig|6666666.65929.peg.1363 CDS gi|480756742|gb|AQUY01000001.1| 364941 363466 -3 - 1476 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.65929.peg.1364 CDS gi|480756742|gb|AQUY01000001.1| 364993 365898 1 + 906 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.65929.peg.1365 CDS gi|480756742|gb|AQUY01000001.1| 365899 366366 1 + 468 hypothetical protein - none -
fig|6666666.65929.peg.1366 CDS gi|480756742|gb|AQUY01000001.1| 366363 367664 3 + 1302 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65929.peg.1367 CDS gi|480756742|gb|AQUY01000001.1| 367689 368204 3 + 516 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.65929.peg.1368 CDS gi|480756742|gb|AQUY01000001.1| 368557 370188 1 + 1632 hypothetical protein - none -
fig|6666666.65929.peg.1369 CDS gi|480756742|gb|AQUY01000001.1| 370414 370196 -1 - 219 hypothetical protein - none -
fig|6666666.65929.peg.1370 CDS gi|480756742|gb|AQUY01000001.1| 371292 370453 -3 - 840 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.65929.peg.1371 CDS gi|480756742|gb|AQUY01000001.1| 372349 371294 -1 - 1056 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.65929.peg.1372 CDS gi|480756742|gb|AQUY01000001.1| 373636 372377 -1 - 1260 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.65929.peg.1373 CDS gi|480756742|gb|AQUY01000001.1| 374877 373789 -3 - 1089 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.65929.peg.1374 CDS gi|480756742|gb|AQUY01000001.1| 375032 376234 2 + 1203 two-component system sensor kinase - none -
fig|6666666.65929.peg.1375 CDS gi|480756742|gb|AQUY01000001.1| 376295 377005 2 + 711 putative two-component system response regulator - none -
fig|6666666.65929.peg.1376 CDS gi|480756742|gb|AQUY01000001.1| 377117 378025 2 + 909 ABC transporter, ATP-binding protein - none -
fig|6666666.65929.peg.1377 CDS gi|480756742|gb|AQUY01000001.1| 378054 378794 3 + 741 Putative ABc transport system integral membrane protein - none -
fig|6666666.65929.peg.1378 CDS gi|480756742|gb|AQUY01000001.1| 379595 378807 -2 - 789 hypothetical protein - none -
fig|6666666.65929.peg.1379 CDS gi|480756742|gb|AQUY01000001.1| 381255 379612 -3 - 1644 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.65929.peg.1380 CDS gi|480756742|gb|AQUY01000001.1| 381315 382187 3 + 873 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.65929.peg.1381 CDS gi|480756742|gb|AQUY01000001.1| 382215 383102 3 + 888 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.65929.peg.1382 CDS gi|480756742|gb|AQUY01000001.1| 383205 384287 3 + 1083 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.65929.peg.1383 CDS gi|480756742|gb|AQUY01000001.1| 384539 384889 2 + 351 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.65929.peg.1384 CDS gi|480756742|gb|AQUY01000001.1| 385194 384937 -3 - 258 hypothetical protein - none -
fig|6666666.65929.peg.1385 CDS gi|480756742|gb|AQUY01000001.1| 385543 385866 1 + 324 FIG00543823: hypothetical protein - none -
fig|6666666.65929.peg.1386 CDS gi|480756742|gb|AQUY01000001.1| 385923 387305 3 + 1383 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.65929.peg.1387 CDS gi|480756742|gb|AQUY01000001.1| 387324 388340 3 + 1017 hypothetical protein - none -
fig|6666666.65929.peg.1388 CDS gi|480756742|gb|AQUY01000001.1| 388347 389567 3 + 1221 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.65929.peg.1389 CDS gi|480756742|gb|AQUY01000001.1| 390380 389586 -2 - 795 Cell surface glycoprotein 1 precursor - none -
fig|6666666.65929.peg.1390 CDS gi|480756742|gb|AQUY01000001.1| 390689 391060 2 + 372 hypothetical protein - none -
fig|6666666.65929.peg.1391 CDS gi|480756742|gb|AQUY01000001.1| 391079 391921 2 + 843 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.65929.peg.1392 CDS gi|480756742|gb|AQUY01000001.1| 391926 392606 3 + 681 DNA-binding response regulator mtrA - none -
fig|6666666.65929.peg.1393 CDS gi|480756742|gb|AQUY01000001.1| 392712 392596 -3 - 117 hypothetical protein - none -
fig|6666666.65929.peg.1394 CDS gi|480756742|gb|AQUY01000001.1| 392681 394399 2 + 1719 Putative two component system sensor kinase - none -
fig|6666666.65929.peg.1395 CDS gi|480756742|gb|AQUY01000001.1| 394401 396197 3 + 1797 LpqB - none -
fig|6666666.65929.peg.1396 CDS gi|480756742|gb|AQUY01000001.1| 396205 396894 1 + 690 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.65929.peg.1397 CDS gi|480756742|gb|AQUY01000001.1| 397062 397730 3 + 669 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.65929.peg.1398 CDS gi|480756742|gb|AQUY01000001.1| 397873 400590 1 + 2718 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65929.peg.1399 CDS gi|480756742|gb|AQUY01000001.1| 401148 400594 -3 - 555 hypothetical protein - none -
fig|6666666.65929.peg.1400 CDS gi|480756742|gb|AQUY01000001.1| 401313 401690 3 + 378 FIG00996758: hypothetical protein - none -
fig|6666666.65929.peg.1401 CDS gi|480756742|gb|AQUY01000001.1| 401695 402201 1 + 507 hypothetical protein - none -
fig|6666666.65929.peg.1402 CDS gi|480756742|gb|AQUY01000001.1| 403161 402238 -3 - 924 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.65929.peg.1403 CDS gi|480756742|gb|AQUY01000001.1| 404636 403272 -2 - 1365 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65929.peg.1404 CDS gi|480756742|gb|AQUY01000001.1| 404698 405459 1 + 762 hypothetical protein - none -
fig|6666666.65929.peg.1405 CDS gi|480756742|gb|AQUY01000001.1| 405537 406145 3 + 609 RNA polymerase sigma-E factor - none -
fig|6666666.65929.peg.1406 CDS gi|480756742|gb|AQUY01000001.1| 406138 406533 1 + 396 hypothetical protein - none -
fig|6666666.65929.peg.1407 CDS gi|480756742|gb|AQUY01000001.1| 407065 406808 -1 - 258 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.65929.peg.1408 CDS gi|480756742|gb|AQUY01000001.1| 408361 407414 -1 - 948 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.65929.peg.1409 CDS gi|480756742|gb|AQUY01000001.1| 408497 408943 2 + 447 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1410 CDS gi|480756742|gb|AQUY01000001.1| 410254 408965 -1 - 1290 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65929.peg.1411 CDS gi|480756742|gb|AQUY01000001.1| 411621 410251 -3 - 1371 putative ATP-dependent RNA helicase - none -
fig|6666666.65929.peg.1412 CDS gi|480756742|gb|AQUY01000001.1| 411777 411995 3 + 219 hypothetical protein - none -
fig|6666666.65929.peg.1413 CDS gi|480756742|gb|AQUY01000001.1| 412265 412954 2 + 690 FIG00820929: hypothetical protein - none -
fig|6666666.65929.peg.1414 CDS gi|480756742|gb|AQUY01000001.1| 412964 413821 2 + 858 hypothetical protein - none -
fig|6666666.65929.peg.1415 CDS gi|480756742|gb|AQUY01000001.1| 413885 417325 2 + 3441 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.65929.peg.1416 CDS gi|480756742|gb|AQUY01000001.1| 417322 420768 1 + 3447 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.65929.peg.1417 CDS gi|480756742|gb|AQUY01000001.1| 420800 421867 2 + 1068 Potassium channel protein Potassium homeostasis
fig|6666666.65929.peg.1418 CDS gi|480756742|gb|AQUY01000001.1| 421908 424058 3 + 2151 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.65929.peg.1419 CDS gi|480756742|gb|AQUY01000001.1| 424069 424815 1 + 747 oxidoreductase ylbE - none -
fig|6666666.65929.peg.1420 CDS gi|480756742|gb|AQUY01000001.1| 425654 424803 -2 - 852 hypothetical protein - none -
fig|6666666.65929.peg.1421 CDS gi|480756742|gb|AQUY01000001.1| 425746 426294 1 + 549 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.65929.peg.1422 CDS gi|480756742|gb|AQUY01000001.1| 427775 426324 -2 - 1452 Collagen alpha 1(I) chain precursor - none -
fig|6666666.65929.peg.1423 CDS gi|480756742|gb|AQUY01000001.1| 427860 428921 3 + 1062 Lon-like protease with PDZ domain CBSS-269801.1.peg.1715
fig|6666666.65929.peg.1424 CDS gi|480756742|gb|AQUY01000001.1| 429541 428960 -1 - 582 FIG129854: hypothetical protein - none -
fig|6666666.65929.peg.1425 CDS gi|480756742|gb|AQUY01000001.1| 429621 432629 3 + 3009 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.65929.peg.1426 CDS gi|480756742|gb|AQUY01000001.1| 433442 432969 -2 - 474 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65929.peg.1427 CDS gi|480756742|gb|AQUY01000001.1| 433556 433948 2 + 393 hypothetical protein - none -
fig|6666666.65929.peg.1428 CDS gi|480756742|gb|AQUY01000001.1| 434627 433920 -2 - 708 hypothetical protein - none -
fig|6666666.65929.peg.1429 CDS gi|480756742|gb|AQUY01000001.1| 435677 434742 -2 - 936 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.65929.peg.1430 CDS gi|480756742|gb|AQUY01000001.1| 436555 435689 -1 - 867 Ku domain protein Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65929.peg.1431 CDS gi|480756742|gb|AQUY01000001.1| 436517 436801 2 + 285 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65929.peg.1432 CDS gi|480756742|gb|AQUY01000001.1| 437027 437377 2 + 351 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65929.peg.1433 CDS gi|480756742|gb|AQUY01000001.1| 437425 438915 1 + 1491 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Bacillus subtilis scratch - gjo;
DNA Repair Base Excision;
DNA ligases;
Nonhomologous End-Joining in Bacteria
fig|6666666.65929.peg.1434 CDS gi|480756742|gb|AQUY01000001.1| 439040 440407 2 + 1368 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65929.peg.1435 CDS gi|480756742|gb|AQUY01000001.1| 440479 440955 1 + 477 hypothetical protein - none -
fig|6666666.65929.peg.1436 CDS gi|480756742|gb|AQUY01000001.1| 441112 441975 1 + 864 hypothetical protein - none -
fig|6666666.65929.peg.1437 CDS gi|480756742|gb|AQUY01000001.1| 442843 442055 -1 - 789 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.65929.peg.1438 CDS gi|480756742|gb|AQUY01000001.1| 443762 442896 -2 - 867 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.65929.peg.1439 CDS gi|480756742|gb|AQUY01000001.1| 443757 444869 3 + 1113 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.65929.peg.1440 CDS gi|480756742|gb|AQUY01000001.1| 444914 445603 2 + 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.65929.peg.1441 CDS gi|480756742|gb|AQUY01000001.1| 445619 446521 2 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.65929.peg.1442 CDS gi|480756742|gb|AQUY01000001.1| 446572 447570 1 + 999 FIG00545275: hypothetical protein - none -
fig|6666666.65929.peg.1443 CDS gi|480756742|gb|AQUY01000001.1| 447625 448686 1 + 1062 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) Valine degradation
fig|6666666.65929.peg.1444 CDS gi|480756742|gb|AQUY01000001.1| 449881 448736 -1 - 1146 hypothetical protein - none -
fig|6666666.65929.peg.1445 CDS gi|480756742|gb|AQUY01000001.1| 450570 450052 -3 - 519 hypothetical protein - none -
fig|6666666.65929.peg.1446 CDS gi|480756742|gb|AQUY01000001.1| 453050 450669 -2 - 2382 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.65929.peg.1447 CDS gi|480756742|gb|AQUY01000001.1| 454085 453228 -2 - 858 hypothetical protein - none -
fig|6666666.65929.peg.1448 CDS gi|480756742|gb|AQUY01000001.1| 455792 454149 -2 - 1644 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.65929.peg.1449 CDS gi|480756742|gb|AQUY01000001.1| 455940 457391 3 + 1452 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65929.peg.1450 CDS gi|480756742|gb|AQUY01000001.1| 458322 457501 -3 - 822 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65929.peg.1451 CDS gi|480756742|gb|AQUY01000001.1| 459259 458309 -1 - 951 putative ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.1452 CDS gi|480756742|gb|AQUY01000001.1| 459922 459302 -1 - 621 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.65929.peg.1453 CDS gi|480756742|gb|AQUY01000001.1| 460671 460036 -3 - 636 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.65929.peg.1454 CDS gi|480756742|gb|AQUY01000001.1| 461880 460903 -3 - 978 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.65929.peg.1455 CDS gi|480756742|gb|AQUY01000001.1| 463387 461909 -1 - 1479 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.65929.peg.1456 CDS gi|480756742|gb|AQUY01000001.1| 464723 463470 -2 - 1254 Putative membrane protein - none -
fig|6666666.65929.peg.1457 CDS gi|480756742|gb|AQUY01000001.1| 464896 468633 1 + 3738 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.65929.peg.1458 CDS gi|480756742|gb|AQUY01000001.1| 468650 469363 2 + 714 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.65929.peg.1459 CDS gi|480756742|gb|AQUY01000001.1| 469375 470178 1 + 804 FIG00545464: hypothetical protein - none -
fig|6666666.65929.peg.1460 CDS gi|480756742|gb|AQUY01000001.1| 470327 471604 2 + 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.65929.peg.1461 CDS gi|480756742|gb|AQUY01000001.1| 471635 472204 2 + 570 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.65929.peg.1462 CDS gi|480756742|gb|AQUY01000001.1| 472292 472855 2 + 564 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.65929.peg.1463 CDS gi|480756742|gb|AQUY01000001.1| 472848 473819 3 + 972 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.65929.peg.1464 CDS gi|480756742|gb|AQUY01000001.1| 474714 473989 -3 - 726 Phage protein - none -
fig|6666666.65929.peg.1465 CDS gi|480756742|gb|AQUY01000001.1| 476095 474797 -1 - 1299 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.65929.peg.1466 CDS gi|480756742|gb|AQUY01000001.1| 476116 477093 1 + 978 hypothetical protein - none -
fig|6666666.65929.peg.1467 CDS gi|480756742|gb|AQUY01000001.1| 478602 477094 -3 - 1509 putative coenzyme A transferase - none -
fig|6666666.65929.peg.1468 CDS gi|480756742|gb|AQUY01000001.1| 480575 478680 -2 - 1896 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) # PabAa Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.65929.peg.1469 CDS gi|480756742|gb|AQUY01000001.1| 482167 480590 -1 - 1578 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.65929.peg.1470 CDS gi|480756742|gb|AQUY01000001.1| 482606 482271 -2 - 336 hypothetical protein - none -
fig|6666666.65929.peg.1471 CDS gi|480756742|gb|AQUY01000001.1| 482817 483755 3 + 939 FIG00543890: hypothetical protein - none -
fig|6666666.65929.peg.1472 CDS gi|480756742|gb|AQUY01000001.1| 484377 483874 -3 - 504 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.65929.peg.1473 CDS gi|480756742|gb|AQUY01000001.1| 484921 484478 -1 - 444 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1474 CDS gi|480756742|gb|AQUY01000001.1| 485042 485965 2 + 924 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.65929.peg.1475 CDS gi|480756742|gb|AQUY01000001.1| 485972 486385 2 + 414 hypothetical protein - none -
fig|6666666.65929.peg.1476 CDS gi|480756742|gb|AQUY01000001.1| 486692 487795 2 + 1104 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65929.peg.1477 CDS gi|480756742|gb|AQUY01000001.1| 487901 488587 2 + 687 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.65929.peg.1478 CDS gi|480756742|gb|AQUY01000001.1| 489533 488607 -2 - 927 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.65929.peg.1479 CDS gi|480756742|gb|AQUY01000001.1| 489689 490993 2 + 1305 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.65929.peg.1480 CDS gi|480756742|gb|AQUY01000001.1| 492075 491071 -3 - 1005 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.65929.peg.1481 CDS gi|480756742|gb|AQUY01000001.1| 492451 492182 -1 - 270 hypothetical protein - none -
fig|6666666.65929.peg.1482 CDS gi|480756742|gb|AQUY01000001.1| 493258 492923 -1 - 336 hypothetical protein - none -
fig|6666666.65929.peg.1483 CDS gi|480756742|gb|AQUY01000001.1| 493281 493646 3 + 366 hypothetical protein - none -
fig|6666666.65929.peg.1484 CDS gi|480756742|gb|AQUY01000001.1| 494015 493866 -2 - 150 hypothetical protein - none -
fig|6666666.65929.peg.1485 CDS gi|480756742|gb|AQUY01000001.1| 494462 494049 -2 - 414 hypothetical protein - none -
fig|6666666.65929.peg.1486 CDS gi|480756742|gb|AQUY01000001.1| 494841 494647 -3 - 195 hypothetical protein - none -
fig|6666666.65929.peg.1487 CDS gi|480756742|gb|AQUY01000001.1| 495104 495247 2 + 144 hypothetical protein - none -
fig|6666666.65929.peg.1488 CDS gi|480756742|gb|AQUY01000001.1| 495756 496556 3 + 801 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Valine degradation
fig|6666666.65929.peg.1489 CDS gi|480756742|gb|AQUY01000001.1| 497831 496659 -2 - 1173 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.65929.peg.1490 CDS gi|480756742|gb|AQUY01000001.1| 498828 498070 -3 - 759 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway
fig|6666666.65929.peg.1491 CDS gi|480756742|gb|AQUY01000001.1| 499186 498821 -1 - 366 FIG00546727: hypothetical protein - none -
fig|6666666.65929.peg.1492 CDS gi|480756742|gb|AQUY01000001.1| 499238 499969 2 + 732 putative LysR-family transcriptional regulator - none -
fig|6666666.65929.peg.1493 CDS gi|480756742|gb|AQUY01000001.1| 500050 501501 1 + 1452 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.65929.peg.1494 CDS gi|480756742|gb|AQUY01000001.1| 501598 502233 1 + 636 sortase or related acyltransferase - none -
fig|6666666.65929.peg.1495 CDS gi|480756742|gb|AQUY01000001.1| 503806 502262 -1 - 1545 permease of the major facilitator superfamily - none -
fig|6666666.65929.peg.1496 CDS gi|480756742|gb|AQUY01000001.1| 504001 503834 -1 - 168 hypothetical protein - none -
fig|6666666.65929.peg.1497 CDS gi|480756742|gb|AQUY01000001.1| 505782 504019 -3 - 1764 Sodium-dependent transporter - none -
fig|6666666.65929.peg.1498 CDS gi|480756742|gb|AQUY01000001.1| 506253 506086 -3 - 168 Putative secreted protein - none -
fig|6666666.65929.peg.1499 CDS gi|480756742|gb|AQUY01000001.1| 507948 506263 -3 - 1686 Sodium-dependent transporter - none -
fig|6666666.65929.peg.1500 CDS gi|480756742|gb|AQUY01000001.1| 509766 508366 -3 - 1401 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.65929.peg.1501 CDS gi|480756742|gb|AQUY01000001.1| 510939 509923 -3 - 1017 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.65929.peg.1502 CDS gi|480756742|gb|AQUY01000001.1| 511141 511719 1 + 579 hypothetical protein - none -
fig|6666666.65929.peg.1503 CDS gi|480756742|gb|AQUY01000001.1| 512037 511783 -3 - 255 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65929.peg.1504 CDS gi|480756742|gb|AQUY01000001.1| 513323 512079 -2 - 1245 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.65929.peg.1505 CDS gi|480756742|gb|AQUY01000001.1| 513402 514379 3 + 978 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65929.peg.1506 CDS gi|480756742|gb|AQUY01000001.1| 515269 514394 -1 - 876 hypothetical protein - none -
fig|6666666.65929.peg.1507 CDS gi|480756742|gb|AQUY01000001.1| 517037 515487 -2 - 1551 putative integral membrane protein - none -
fig|6666666.65929.peg.1508 CDS gi|480756742|gb|AQUY01000001.1| 517124 518203 2 + 1080 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.65929.peg.1509 CDS gi|480756742|gb|AQUY01000001.1| 518554 518225 -1 - 330 hypothetical protein - none -
fig|6666666.65929.peg.1510 CDS gi|480756742|gb|AQUY01000001.1| 519362 518733 -2 - 630 FMN reductase, NADPH-dependent - none -
fig|6666666.65929.peg.1511 CDS gi|480756742|gb|AQUY01000001.1| 519616 520056 1 + 441 FIG00544626: hypothetical protein - none -
fig|6666666.65929.peg.1512 CDS gi|480756742|gb|AQUY01000001.1| 520253 520639 2 + 387 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein - none -
fig|6666666.65929.peg.1513 CDS gi|480756742|gb|AQUY01000001.1| 521706 521005 -3 - 702 integral-membrane protein - none -
fig|6666666.65929.peg.1514 CDS gi|480756742|gb|AQUY01000001.1| 523028 522144 -2 - 885 hypothetical protein - none -
fig|6666666.65929.peg.1515 CDS gi|480756742|gb|AQUY01000001.1| 523164 523865 3 + 702 FIG00547157: hypothetical protein - none -
fig|6666666.65929.peg.1516 CDS gi|480756742|gb|AQUY01000001.1| 524003 525583 2 + 1581 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.65929.peg.1517 CDS gi|480756742|gb|AQUY01000001.1| 525678 526604 3 + 927 ABC-type transporter, permease component - none -
fig|6666666.65929.peg.1518 CDS gi|480756742|gb|AQUY01000001.1| 526597 527562 1 + 966 ABC-type transporter, permease component - none -
fig|6666666.65929.peg.1519 CDS gi|480756742|gb|AQUY01000001.1| 527562 529232 3 + 1671 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.1520 CDS gi|480756742|gb|AQUY01000001.1| 529841 529251 -2 - 591 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) Protein-L-isoaspartate O-methyltransferase;
Stationary phase repair cluster
fig|6666666.65929.peg.1521 CDS gi|480756742|gb|AQUY01000001.1| 530392 529844 -1 - 549 carbonic anhydrase, family 3 - none -
fig|6666666.65929.peg.1522 CDS gi|480756742|gb|AQUY01000001.1| 531953 530409 -2 - 1545 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.65929.peg.1523 CDS gi|480756742|gb|AQUY01000001.1| 533656 531968 -1 - 1689 Flavoprotein - none -
fig|6666666.65929.peg.1524 CDS gi|480756742|gb|AQUY01000001.1| 533830 534813 1 + 984 Diacylglycerol kinase-related protein - none -
fig|6666666.65929.peg.1525 CDS gi|480756742|gb|AQUY01000001.1| 534883 535680 1 + 798 Metal transporter, ZIP family - none -
fig|6666666.65929.peg.1526 CDS gi|480756742|gb|AQUY01000001.1| 536693 535677 -2 - 1017 Membrane protein, putative - none -
fig|6666666.65929.peg.1527 CDS gi|480756742|gb|AQUY01000001.1| 536843 537823 2 + 981 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65929.peg.1528 CDS gi|480756742|gb|AQUY01000001.1| 538253 537840 -2 - 414 hypothetical protein - none -
fig|6666666.65929.peg.1529 CDS gi|480756742|gb|AQUY01000001.1| 538304 538906 2 + 603 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.65929.peg.1530 CDS gi|480756742|gb|AQUY01000001.1| 538906 540183 1 + 1278 aspartyl aminopeptidase - none -
fig|6666666.65929.peg.1531 CDS gi|480756742|gb|AQUY01000001.1| 540261 541532 3 + 1272 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65929.peg.1532 CDS gi|480756742|gb|AQUY01000001.1| 541885 541595 -1 - 291 hypothetical protein - none -
fig|6666666.65929.peg.1533 CDS gi|480756742|gb|AQUY01000001.1| 543814 542018 -1 - 1797 hypothetical protein - none -
fig|6666666.65929.peg.1534 CDS gi|480756742|gb|AQUY01000001.1| 546626 543825 -2 - 2802 hypothetical protein - none -
fig|6666666.65929.peg.1535 CDS gi|480756742|gb|AQUY01000001.1| 546797 547978 2 + 1182 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.65929.peg.1536 CDS gi|480756742|gb|AQUY01000001.1| 548077 548376 1 + 300 hypothetical protein - none -
fig|6666666.65929.peg.1537 CDS gi|480756742|gb|AQUY01000001.1| 548951 548382 -2 - 570 hypothetical protein - none -
fig|6666666.65929.peg.1538 CDS gi|480756742|gb|AQUY01000001.1| 549481 548948 -1 - 534 FIG00544603: hypothetical protein - none -
fig|6666666.65929.peg.1539 CDS gi|480756742|gb|AQUY01000001.1| 550323 549643 -3 - 681 FIG00544264: hypothetical protein - none -
fig|6666666.65929.peg.1540 CDS gi|480756742|gb|AQUY01000001.1| 550421 550534 2 + 114 hypothetical protein - none -
fig|6666666.65929.peg.1541 CDS gi|480756742|gb|AQUY01000001.1| 550695 550549 -3 - 147 hypothetical protein - none -
fig|6666666.65929.peg.1542 CDS gi|480756742|gb|AQUY01000001.1| 550687 552603 1 + 1917 GTP-binding protein TypA/BipA - none -
fig|6666666.65929.peg.1543 CDS gi|480756742|gb|AQUY01000001.1| 552746 552615 -2 - 132 hypothetical protein - none -
fig|6666666.65929.peg.1544 CDS gi|480756742|gb|AQUY01000001.1| 552710 554440 2 + 1731 ABC-type transporter, periplasmic component - none -
fig|6666666.65929.peg.1545 CDS gi|480756742|gb|AQUY01000001.1| 554433 555386 3 + 954 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.65929.peg.1546 CDS gi|480756742|gb|AQUY01000001.1| 555451 555864 1 + 414 hypothetical membrane protein - none -
fig|6666666.65929.peg.1547 CDS gi|480756742|gb|AQUY01000001.1| 555946 556269 1 + 324 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.65929.peg.1548 CDS gi|480756742|gb|AQUY01000001.1| 556288 557394 1 + 1107 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65929.peg.1549 CDS gi|480756742|gb|AQUY01000001.1| 558793 557360 -1 - 1434 Phenylalanine-specific permease - none -
fig|6666666.65929.peg.1550 CDS gi|480756742|gb|AQUY01000001.1| 559752 558847 -3 - 906 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65929.peg.1551 CDS gi|480756742|gb|AQUY01000001.1| 559902 560744 3 + 843 FIG01121566: hypothetical protein - none -
fig|6666666.65929.peg.1552 CDS gi|480756742|gb|AQUY01000001.1| 560779 561591 1 + 813 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.65929.peg.1553 CDS gi|480756742|gb|AQUY01000001.1| 561588 562469 3 + 882 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.65929.peg.1554 CDS gi|480756742|gb|AQUY01000001.1| 562525 562695 1 + 171 FIG00545868: hypothetical protein - none -
fig|6666666.65929.peg.1555 CDS gi|480756742|gb|AQUY01000001.1| 562855 563727 1 + 873 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.65929.peg.1556 CDS gi|480756742|gb|AQUY01000001.1| 565018 563828 -1 - 1191 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.65929.peg.1557 CDS gi|480756742|gb|AQUY01000001.1| 565152 565024 -3 - 129 hypothetical protein - none -
fig|6666666.65929.peg.1558 CDS gi|480756742|gb|AQUY01000001.1| 565123 566358 1 + 1236 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.65929.peg.1559 CDS gi|480756742|gb|AQUY01000001.1| 567138 566359 -3 - 780 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.65929.peg.1560 CDS gi|480756742|gb|AQUY01000001.1| 567806 567150 -2 - 657 FIG00945644: hypothetical protein - none -
fig|6666666.65929.peg.1561 CDS gi|480756742|gb|AQUY01000001.1| 567957 568565 3 + 609 putative RNA polymerase sigma factor - none -
fig|6666666.65929.peg.1562 CDS gi|480756742|gb|AQUY01000001.1| 568869 568750 -3 - 120 hypothetical protein - none -
fig|6666666.65929.peg.1563 CDS gi|480756742|gb|AQUY01000001.1| 568887 569054 3 + 168 hypothetical protein - none -
fig|6666666.65929.peg.1564 CDS gi|480756742|gb|AQUY01000001.1| 569051 570493 2 + 1443 serine protease - none -
fig|6666666.65929.peg.1565 CDS gi|480756742|gb|AQUY01000001.1| 570512 571030 2 + 519 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.65929.peg.1566 CDS gi|480756742|gb|AQUY01000001.1| 572128 571076 -1 - 1053 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.65929.peg.1567 CDS gi|480756742|gb|AQUY01000001.1| 573301 572168 -1 - 1134 Mrp protein homolog - none -
fig|6666666.65929.peg.1568 CDS gi|480756742|gb|AQUY01000001.1| 573928 573326 -1 - 603 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1569 CDS gi|480756742|gb|AQUY01000001.1| 575210 573921 -2 - 1290 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.65929.peg.1570 CDS gi|480756742|gb|AQUY01000001.1| 575252 575764 2 + 513 hypothetical protein - none -
fig|6666666.65929.peg.1571 CDS gi|480756742|gb|AQUY01000001.1| 576792 575761 -3 - 1032 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.65929.peg.1572 CDS gi|480756742|gb|AQUY01000001.1| 577084 577794 1 + 711 hypothetical protein - none -
fig|6666666.65929.peg.1573 CDS gi|480756742|gb|AQUY01000001.1| 581632 577934 -1 - 3699 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.65929.peg.1574 CDS gi|480756742|gb|AQUY01000001.1| 585581 581772 -2 - 3810 FIG00543822: hypothetical protein - none -
fig|6666666.65929.peg.1575 CDS gi|480756742|gb|AQUY01000001.1| 586414 585605 -1 - 810 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1576 CDS gi|480756742|gb|AQUY01000001.1| 586492 587997 1 + 1506 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.65929.peg.1577 CDS gi|480756742|gb|AQUY01000001.1| 588050 588976 2 + 927 FIG00544678: hypothetical protein - none -
fig|6666666.65929.peg.1578 CDS gi|480756742|gb|AQUY01000001.1| 589909 589073 -1 - 837 Putative secreted hydrolase - none -
fig|6666666.65929.peg.1579 CDS gi|480756742|gb|AQUY01000001.1| 590587 590012 -1 - 576 hypothetical protein - none -
fig|6666666.65929.peg.1580 CDS gi|480756742|gb|AQUY01000001.1| 590704 591936 1 + 1233 putative multidrug resistance protein - none -
fig|6666666.65929.peg.1581 CDS gi|480756742|gb|AQUY01000001.1| 592078 594279 1 + 2202 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.65929.peg.1582 CDS gi|480756742|gb|AQUY01000001.1| 594858 594391 -3 - 468 hypothetical membrane protein - none -
fig|6666666.65929.peg.1583 CDS gi|480756742|gb|AQUY01000001.1| 595641 598538 3 + 2898 Helicase, SNF2/RAD54 family - none -
fig|6666666.65929.peg.1584 CDS gi|480756742|gb|AQUY01000001.1| 598535 599395 2 + 861 hypothetical protein - none -
fig|6666666.65929.peg.1585 CDS gi|480756742|gb|AQUY01000001.1| 599418 600542 3 + 1125 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.65929.peg.1586 CDS gi|480756742|gb|AQUY01000001.1| 600545 603199 2 + 2655 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.65929.peg.1587 CDS gi|480756742|gb|AQUY01000001.1| 603768 603220 -3 - 549 Protein yceI precursor - none -
fig|6666666.65929.peg.1588 CDS gi|480756742|gb|AQUY01000001.1| 603986 604444 2 + 459 Transcriptional regulator, MarR family - none -
fig|6666666.65929.peg.1589 CDS gi|480756742|gb|AQUY01000001.1| 605299 604652 -1 - 648 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.65929.peg.1590 CDS gi|480756742|gb|AQUY01000001.1| 606852 605299 -3 - 1554 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.65929.peg.1591 CDS gi|480756742|gb|AQUY01000001.1| 607634 606849 -2 - 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.65929.peg.1592 CDS gi|480756742|gb|AQUY01000001.1| 607716 609368 3 + 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.65929.peg.1593 CDS gi|480756742|gb|AQUY01000001.1| 609373 610770 1 + 1398 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.65929.peg.1594 CDS gi|480756742|gb|AQUY01000001.1| 610775 612100 2 + 1326 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65929.peg.1595 CDS gi|480756742|gb|AQUY01000001.1| 612104 613009 2 + 906 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.65929.peg.1596 CDS gi|480756742|gb|AQUY01000001.1| 614738 613014 -2 - 1725 acyl-CoA synthetase - none -
fig|6666666.65929.peg.1597 CDS gi|480756742|gb|AQUY01000001.1| 615002 616978 2 + 1977 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.65929.peg.1598 CDS gi|480756742|gb|AQUY01000001.1| 616978 618057 1 + 1080 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.65929.peg.1599 CDS gi|480756742|gb|AQUY01000001.1| 618083 618997 2 + 915 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.65929.peg.1600 CDS gi|480756742|gb|AQUY01000001.1| 618994 619659 1 + 666 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.65929.peg.1601 CDS gi|480756742|gb|AQUY01000001.1| 619678 620916 1 + 1239 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.65929.peg.1602 CDS gi|480756742|gb|AQUY01000001.1| 620928 621392 3 + 465 ATP synthase protein I - none -
fig|6666666.65929.peg.1603 CDS gi|480756742|gb|AQUY01000001.1| 621773 622576 2 + 804 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1604 CDS gi|480756742|gb|AQUY01000001.1| 622700 622942 2 + 243 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1605 CDS gi|480756742|gb|AQUY01000001.1| 622987 623553 1 + 567 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1606 CDS gi|480756742|gb|AQUY01000001.1| 623559 624377 3 + 819 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1607 CDS gi|480756742|gb|AQUY01000001.1| 624442 626085 1 + 1644 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1608 CDS gi|480756742|gb|AQUY01000001.1| 626135 627109 2 + 975 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1609 CDS gi|480756742|gb|AQUY01000001.1| 627112 628551 1 + 1440 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1610 CDS gi|480756742|gb|AQUY01000001.1| 628566 628937 3 + 372 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.65929.peg.1611 CDS gi|480756742|gb|AQUY01000001.1| 629139 629609 3 + 471 hypothetical protein - none -
fig|6666666.65929.peg.1612 CDS gi|480756742|gb|AQUY01000001.1| 629718 630410 3 + 693 FIG00996186: hypothetical protein - none -
fig|6666666.65929.peg.1613 CDS gi|480756742|gb|AQUY01000001.1| 630559 630780 1 + 222 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.65929.peg.1614 CDS gi|480756742|gb|AQUY01000001.1| 630805 631827 1 + 1023 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.65929.peg.1615 CDS gi|480756742|gb|AQUY01000001.1| 633147 631855 -3 - 1293 13E12 repeat family protein - none -
fig|6666666.65929.peg.1616 CDS gi|480756742|gb|AQUY01000001.1| 635544 633349 -3 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.65929.peg.1617 CDS gi|480756742|gb|AQUY01000001.1| 637656 635626 -3 - 2031 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.65929.peg.1618 CDS gi|480756742|gb|AQUY01000001.1| 637787 638611 2 + 825 ABC transporter, ATP-binding protein - none -
fig|6666666.65929.peg.1619 CDS gi|480756742|gb|AQUY01000001.1| 638664 639431 3 + 768 FIG00996530: hypothetical protein - none -
fig|6666666.65929.peg.1620 CDS gi|480756742|gb|AQUY01000001.1| 639428 640585 2 + 1158 SAM-dependent methyltransferase - none -
fig|6666666.65929.peg.1621 CDS gi|480756742|gb|AQUY01000001.1| 640708 641508 1 + 801 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65929.peg.1622 CDS gi|480756742|gb|AQUY01000001.1| 641547 642500 3 + 954 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.65929.peg.1623 CDS gi|480756742|gb|AQUY01000001.1| 642847 643413 1 + 567 hypothetical protein - none -
fig|6666666.65929.peg.1624 CDS gi|480756742|gb|AQUY01000001.1| 643937 644344 2 + 408 hypothetical protein - none -
fig|6666666.65929.peg.1625 CDS gi|480756742|gb|AQUY01000001.1| 644526 646082 3 + 1557 hypothetical protein - none -
fig|6666666.65929.peg.1626 CDS gi|480756742|gb|AQUY01000001.1| 646096 647265 1 + 1170 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.65929.peg.1627 CDS gi|480756742|gb|AQUY01000001.1| 647294 648397 2 + 1104 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.65929.peg.1628 CDS gi|480756742|gb|AQUY01000001.1| 648403 649413 1 + 1011 hypothetical protein - none -
fig|6666666.65929.peg.1629 CDS gi|480756742|gb|AQUY01000001.1| 650151 649441 -3 - 711 FIG00544413: hypothetical protein - none -
fig|6666666.65929.peg.1630 CDS gi|480756742|gb|AQUY01000001.1| 650180 652288 2 + 2109 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.65929.peg.1631 CDS gi|480756742|gb|AQUY01000001.1| 652479 652682 3 + 204 hypothetical protein - none -
fig|6666666.65929.peg.1632 CDS gi|480756742|gb|AQUY01000001.1| 653416 652961 -1 - 456 hypothetical protein - none -
fig|6666666.65929.peg.1633 CDS gi|480756742|gb|AQUY01000001.1| 654882 654223 -3 - 660 FIG00544014: hypothetical protein - none -
fig|6666666.65929.peg.1634 CDS gi|480756742|gb|AQUY01000001.1| 655020 655316 3 + 297 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65929.peg.1635 CDS gi|480756742|gb|AQUY01000001.1| 655320 656819 3 + 1500 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65929.peg.1636 CDS gi|480756742|gb|AQUY01000001.1| 656886 657917 3 + 1032 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.65929.peg.1637 CDS gi|480756742|gb|AQUY01000001.1| 658708 657914 -1 - 795 FIG00545160: hypothetical protein - none -
fig|6666666.65929.peg.1638 CDS gi|480756742|gb|AQUY01000001.1| 658760 660265 2 + 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.65929.peg.1639 CDS gi|480756742|gb|AQUY01000001.1| 660324 660983 3 + 660 hypothetical protein - none -
fig|6666666.65929.peg.1640 CDS gi|480756742|gb|AQUY01000001.1| 660987 661682 3 + 696 hypothetical protein - none -
fig|6666666.65929.peg.1641 CDS gi|480756742|gb|AQUY01000001.1| 662657 661689 -2 - 969 hypothetical protein - none -
fig|6666666.65929.peg.1642 CDS gi|480756742|gb|AQUY01000001.1| 662790 663857 3 + 1068 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.65929.peg.1643 CDS gi|480756742|gb|AQUY01000001.1| 665772 663925 -3 - 1848 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.65929.peg.1644 CDS gi|480756742|gb|AQUY01000001.1| 666230 665772 -2 - 459 Putative low molecular weight protein antigen 6 - none -
fig|6666666.65929.peg.1645 CDS gi|480756742|gb|AQUY01000001.1| 668123 666333 -2 - 1791 FIG00544780: hypothetical protein - none -
fig|6666666.65929.peg.1646 CDS gi|480756742|gb|AQUY01000001.1| 668496 670280 3 + 1785 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65929.peg.1647 CDS gi|480756742|gb|AQUY01000001.1| 670285 670794 1 + 510 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.65929.peg.1648 CDS gi|480756742|gb|AQUY01000001.1| 670848 671861 3 + 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65929.peg.1649 CDS gi|480756742|gb|AQUY01000001.1| 671975 673705 2 + 1731 hypothetical protein - none -
fig|6666666.65929.peg.1650 CDS gi|480756742|gb|AQUY01000001.1| 673740 675203 3 + 1464 hypothetical protein - none -
fig|6666666.65929.peg.1651 CDS gi|480756742|gb|AQUY01000001.1| 675309 676904 3 + 1596 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.65929.peg.1652 CDS gi|480756742|gb|AQUY01000001.1| 677121 678632 3 + 1512 putative coenzyme A transferase - none -
fig|6666666.65929.peg.1653 CDS gi|480756742|gb|AQUY01000001.1| 678751 679839 1 + 1089 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65929.peg.1654 CDS gi|480756742|gb|AQUY01000001.1| 679850 680656 2 + 807 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.65929.peg.1655 CDS gi|480756742|gb|AQUY01000001.1| 681848 680676 -2 - 1173 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.65929.peg.1656 CDS gi|480756742|gb|AQUY01000001.1| 681915 683423 3 + 1509 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.65929.peg.1657 CDS gi|480756742|gb|AQUY01000001.1| 683443 684993 1 + 1551 putative ABC transporter transmembrane protein( EC:3.6.3.30 ) - none -
fig|6666666.65929.peg.1658 CDS gi|480756742|gb|AQUY01000001.1| 684994 686769 1 + 1776 hypothetical protein - none -
fig|6666666.65929.peg.1659 CDS gi|480756742|gb|AQUY01000001.1| 687879 688175 3 + 297 hypothetical protein - none -
fig|6666666.65929.peg.1660 CDS gi|480756742|gb|AQUY01000001.1| 688222 689370 1 + 1149 putative monooxygenase - none -
fig|6666666.65929.peg.1661 CDS gi|480756742|gb|AQUY01000001.1| 689485 690741 1 + 1257 probable multidrug resistance transporter, MFS superfamily - none -
fig|6666666.65929.peg.1662 CDS gi|480756742|gb|AQUY01000001.1| 690809 691000 2 + 192 hypothetical protein - none -
fig|6666666.65929.peg.1663 CDS gi|480756742|gb|AQUY01000001.1| 691013 691282 2 + 270 hypothetical protein - none -
fig|6666666.65929.peg.1664 CDS gi|480756742|gb|AQUY01000001.1| 692450 691449 -2 - 1002 Hydrolases of the alpha/beta superfamily - none -
fig|6666666.65929.peg.1665 CDS gi|480756742|gb|AQUY01000001.1| 692486 693112 2 + 627 conserved hypothetical protein-putative membrane protein - none -
fig|6666666.65929.peg.1666 CDS gi|480756742|gb|AQUY01000001.1| 693217 694497 1 + 1281 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.65929.peg.1667 CDS gi|480756742|gb|AQUY01000001.1| 694654 698118 1 + 3465 hypothetical protein - none -
fig|6666666.65929.peg.1668 CDS gi|480756742|gb|AQUY01000001.1| 700465 699623 -1 - 843 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65929.peg.1669 CDS gi|480756742|gb|AQUY01000001.1| 702145 700631 -1 - 1515 Fimbrial subunit type 2 precursor - none -
fig|6666666.65929.peg.1670 CDS gi|480756742|gb|AQUY01000001.1| 702721 703617 1 + 897 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.65929.peg.1671 CDS gi|480756742|gb|AQUY01000001.1| 704615 703692 -2 - 924 hypothetical protein - none -
fig|6666666.65929.peg.1672 CDS gi|480756742|gb|AQUY01000001.1| 704839 705756 1 + 918 hypothetical protein - none -
fig|6666666.65929.peg.1673 CDS gi|480756742|gb|AQUY01000001.1| 707778 705778 -3 - 2001 oligopeptide transporter - none -
fig|6666666.65929.peg.1674 CDS gi|480756742|gb|AQUY01000001.1| 707966 708319 2 + 354 hypothetical protein - none -
fig|6666666.65929.peg.1675 CDS gi|480756742|gb|AQUY01000001.1| 708274 709431 1 + 1158 hypothetical protein - none -
fig|6666666.65929.peg.1676 CDS gi|480756742|gb|AQUY01000001.1| 710138 709473 -2 - 666 hypothetical protein - none -
fig|6666666.65929.peg.1677 CDS gi|480756742|gb|AQUY01000001.1| 710221 711576 1 + 1356 hypothetical protein - none -
fig|6666666.65929.peg.1678 CDS gi|480756742|gb|AQUY01000001.1| 711601 712938 1 + 1338 hypothetical protein - none -
fig|6666666.65929.peg.1679 CDS gi|480756742|gb|AQUY01000001.1| 713867 712989 -2 - 879 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.65929.peg.1680 CDS gi|480756742|gb|AQUY01000001.1| 714132 713881 -3 - 252 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.65929.peg.1681 CDS gi|480756742|gb|AQUY01000001.1| 716256 714142 -3 - 2115 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.65929.peg.1682 CDS gi|480756742|gb|AQUY01000001.1| 717563 716358 -2 - 1206 sugar transporter family protein - none -
fig|6666666.65929.peg.1683 CDS gi|480756742|gb|AQUY01000001.1| 718261 717560 -1 - 702 Transcriptional regulator, IclR family - none -
fig|6666666.65929.peg.1684 CDS gi|480756742|gb|AQUY01000001.1| 718337 719776 2 + 1440 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65929.peg.1685 CDS gi|480756742|gb|AQUY01000001.1| 719818 720414 1 + 597 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.65929.peg.1686 CDS gi|480756742|gb|AQUY01000001.1| 720592 720945 1 + 354 DNA-binding protein HU / low-complexity, AKP-rich domain DNA structural proteins, bacterial
fig|6666666.65929.peg.1687 CDS gi|480756742|gb|AQUY01000001.1| 721958 720963 -2 - 996 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.65929.peg.1688 CDS gi|480756742|gb|AQUY01000001.1| 722032 723030 1 + 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.1689 CDS gi|480756742|gb|AQUY01000001.1| 723051 724151 3 + 1101 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.65929.peg.1690 CDS gi|480756742|gb|AQUY01000001.1| 725024 724158 -2 - 867 Putative exported protein - none -
fig|6666666.65929.peg.1691 CDS gi|480756742|gb|AQUY01000001.1| 725105 726067 2 + 963 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.65929.peg.1692 CDS gi|480756742|gb|AQUY01000001.1| 726067 726741 1 + 675 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.65929.peg.1693 CDS gi|480756742|gb|AQUY01000001.1| 726752 728242 2 + 1491 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.1694 CDS gi|480756742|gb|AQUY01000001.1| 728254 730329 1 + 2076 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.65929.peg.1695 CDS gi|480756742|gb|AQUY01000001.1| 730363 730569 1 + 207 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65929.peg.1696 CDS gi|480756742|gb|AQUY01000001.1| 730566 731144 3 + 579 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.65929.peg.1697 CDS gi|480756742|gb|AQUY01000001.1| 731150 731629 2 + 480 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.65929.peg.1698 CDS gi|480756742|gb|AQUY01000001.1| 731649 732374 3 + 726 Cell division initiation protein - none -
fig|6666666.65929.peg.1699 CDS gi|480756742|gb|AQUY01000001.1| 732401 732925 2 + 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.65929.peg.1700 CDS gi|480756742|gb|AQUY01000001.1| 732922 733653 1 + 732 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.65929.peg.1701 CDS gi|480756742|gb|AQUY01000001.1| 733659 734516 3 + 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.65929.peg.1702 CDS gi|480756742|gb|AQUY01000001.1| 734527 735993 1 + 1467 amino acid carrier protein - none -
fig|6666666.65929.peg.1703 CDS gi|480756742|gb|AQUY01000001.1| 736111 736386 1 + 276 hypothetical protein - none -
fig|6666666.65929.peg.1704 CDS gi|480756742|gb|AQUY01000001.1| 736455 738392 3 + 1938 Ferrous iron transport protein B - none -
fig|6666666.65929.peg.1705 CDS gi|480756742|gb|AQUY01000001.1| 738392 738682 2 + 291 hypothetical protein - none -
fig|6666666.65929.peg.1706 CDS gi|480756742|gb|AQUY01000001.1| 738694 742158 1 + 3465 Chromosome partition protein smc DNA structural proteins, bacterial
fig|6666666.65929.peg.1707 CDS gi|480756742|gb|AQUY01000001.1| 742192 743835 1 + 1644 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.65929.peg.1708 CDS gi|480756742|gb|AQUY01000001.1| 743896 745485 1 + 1590 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.65929.peg.1709 CDS gi|480756742|gb|AQUY01000001.1| 747697 745580 -1 - 2118 O-antigen acetylase - none -
fig|6666666.65929.peg.1710 CDS gi|480756742|gb|AQUY01000001.1| 748047 748529 3 + 483 SSU ribosomal protein S16p KH domain RNA binding protein YlqC
fig|6666666.65929.peg.1711 CDS gi|480756742|gb|AQUY01000001.1| 748706 749983 2 + 1278 putative transport protein - none -
fig|6666666.65929.peg.1712 CDS gi|480756742|gb|AQUY01000001.1| 749994 750236 3 + 243 KH domain RNA binding protein YlqC KH domain RNA binding protein YlqC
fig|6666666.65929.peg.1713 CDS gi|480756742|gb|AQUY01000001.1| 751733 750240 -2 - 1494 ATP-dependent Zn protease - none -
fig|6666666.65929.peg.1714 CDS gi|480756742|gb|AQUY01000001.1| 751862 752374 2 + 513 16S rRNA processing protein RimM KH domain RNA binding protein YlqC
fig|6666666.65929.peg.1715 CDS gi|480756742|gb|AQUY01000001.1| 752379 753548 3 + 1170 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.65929.peg.1716 CDS gi|480756742|gb|AQUY01000001.1| 753574 755916 1 + 2343 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.65929.peg.1717 CDS gi|480756742|gb|AQUY01000001.1| 756094 756438 1 + 345 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.65929.peg.1718 CDS gi|480756742|gb|AQUY01000001.1| 756525 757799 3 + 1275 Neopullulanase (EC 3.2.1.135) Maltose and Maltodextrin Utilization
fig|6666666.65929.peg.1719 CDS gi|480756742|gb|AQUY01000001.1| 757856 758602 2 + 747 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.65929.peg.1720 CDS gi|480756742|gb|AQUY01000001.1| 758599 759237 1 + 639 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.65929.peg.1721 CDS gi|480756742|gb|AQUY01000001.1| 759234 759539 3 + 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.65929.peg.1722 CDS gi|480756742|gb|AQUY01000001.1| 759685 760038 1 + 354 hypothetical protein - none -
fig|6666666.65929.peg.1723 CDS gi|480756742|gb|AQUY01000001.1| 760038 761624 3 + 1587 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.65929.peg.1724 CDS gi|480756742|gb|AQUY01000001.1| 761614 762771 1 + 1158 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.65929.peg.1725 CDS gi|480756742|gb|AQUY01000001.1| 762781 763671 1 + 891 Tyrosine recombinase XerC - none -
fig|6666666.65929.peg.1726 CDS gi|480756742|gb|AQUY01000001.1| 763787 765367 2 + 1581 hypothetical protein - none -
fig|6666666.65929.peg.1727 CDS gi|480756742|gb|AQUY01000001.1| 765933 765394 -3 - 540 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.65929.peg.1728 CDS gi|480756742|gb|AQUY01000001.1| 766347 767183 3 + 837 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.65929.peg.1729 CDS gi|480756742|gb|AQUY01000001.1| 767265 768122 3 + 858 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.65929.peg.1730 CDS gi|480756742|gb|AQUY01000001.1| 768251 768997 2 + 747 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.65929.peg.1731 CDS gi|480756742|gb|AQUY01000001.1| 769078 769635 1 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.65929.peg.1732 CDS gi|480756742|gb|AQUY01000001.1| 769642 770568 1 + 927 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.1733 CDS gi|480756742|gb|AQUY01000001.1| 771093 770602 -3 - 492 Putative membrane protein - none -
fig|6666666.65929.peg.1734 CDS gi|480756742|gb|AQUY01000001.1| 771164 772318 2 + 1155 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.65929.peg.1735 CDS gi|480756742|gb|AQUY01000001.1| 773699 772350 -2 - 1350 permease of the major facilitator superfamily - none -
fig|6666666.65929.peg.1736 CDS gi|480756742|gb|AQUY01000001.1| 774258 773824 -3 - 435 hypothetical membrane protein - none -
fig|6666666.65929.peg.1737 CDS gi|480756742|gb|AQUY01000001.1| 774368 775528 2 + 1161 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65929.peg.1738 CDS gi|480756742|gb|AQUY01000001.1| 775557 776792 3 + 1236 Membrane-associated zinc metalloprotease - none -
fig|6666666.65929.peg.1739 CDS gi|480756742|gb|AQUY01000001.1| 776824 777969 1 + 1146 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.65929.peg.1740 CDS gi|480756742|gb|AQUY01000001.1| 778100 779848 2 + 1749 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.65929.peg.1741 CDS gi|480756742|gb|AQUY01000001.1| 779874 780755 3 + 882 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.65929.peg.1742 CDS gi|480756742|gb|AQUY01000001.1| 781186 780752 -1 - 435 hypothetical protein - none -
fig|6666666.65929.peg.1743 CDS gi|480756742|gb|AQUY01000001.1| 782563 781187 -1 - 1377 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.65929.peg.1744 CDS gi|480756742|gb|AQUY01000001.1| 783581 782568 -2 - 1014 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.65929.peg.1745 CDS gi|480756742|gb|AQUY01000001.1| 783813 785312 3 + 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.65929.peg.1746 CDS gi|480756742|gb|AQUY01000001.1| 786557 785337 -2 - 1221 hypothetical protein - none -
fig|6666666.65929.peg.1747 CDS gi|480756742|gb|AQUY01000001.1| 786703 788199 1 + 1497 Putative transmembrane efflux protein - none -
fig|6666666.65929.peg.1748 CDS gi|480756742|gb|AQUY01000001.1| 788320 789969 1 + 1650 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.65929.peg.1749 CDS gi|480756742|gb|AQUY01000001.1| 791202 790000 -3 - 1203 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.65929.peg.1750 CDS gi|480756742|gb|AQUY01000001.1| 791959 791216 -1 - 744 UPF0246 protein YaaA - none -
fig|6666666.65929.peg.1751 CDS gi|480756742|gb|AQUY01000001.1| 792015 793835 3 + 1821 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.65929.peg.1752 CDS gi|480756742|gb|AQUY01000001.1| 794518 793832 -1 - 687 hypothetical protein - none -
fig|6666666.65929.peg.1753 CDS gi|480756742|gb|AQUY01000001.1| 794492 794686 2 + 195 hypothetical protein - none -
fig|6666666.65929.peg.1754 CDS gi|480756742|gb|AQUY01000001.1| 794848 795369 1 + 522 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.65929.peg.1755 CDS gi|480756742|gb|AQUY01000001.1| 795373 796371 1 + 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65929.peg.1756 CDS gi|480756742|gb|AQUY01000001.1| 796461 796787 3 + 327 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.65929.peg.1757 CDS gi|480756742|gb|AQUY01000001.1| 796884 799793 3 + 2910 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65929.peg.1758 CDS gi|480756742|gb|AQUY01000001.1| 800085 801545 3 + 1461 sulfide-quinone reductase - none -
fig|6666666.65929.peg.1759 CDS gi|480756742|gb|AQUY01000001.1| 801558 801740 3 + 183 hypothetical protein - none -
fig|6666666.65929.peg.1760 CDS gi|480756742|gb|AQUY01000001.1| 801891 802349 3 + 459 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.65929.peg.1761 CDS gi|480756742|gb|AQUY01000001.1| 802349 803365 2 + 1017 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.65929.peg.1762 CDS gi|480756742|gb|AQUY01000001.1| 803377 804666 1 + 1290 putative DNA-damage-inducible protein F - none -
fig|6666666.65929.peg.1763 CDS gi|480756742|gb|AQUY01000001.1| 804764 805558 2 + 795 putative SimX4 homolog - none -
fig|6666666.65929.peg.1764 CDS gi|480756742|gb|AQUY01000001.1| 805555 806205 1 + 651 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.65929.peg.1765 CDS gi|480756742|gb|AQUY01000001.1| 807101 806202 -2 - 900 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses
fig|6666666.65929.peg.1766 CDS gi|480756742|gb|AQUY01000001.1| 807123 808097 3 + 975 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.65929.peg.1767 CDS gi|480756742|gb|AQUY01000001.1| 808310 808591 2 + 282 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.65929.peg.1768 CDS gi|480756742|gb|AQUY01000001.1| 808793 811111 2 + 2319 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.65929.peg.1769 CDS gi|480756742|gb|AQUY01000001.1| 812844 811108 -3 - 1737 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.65929.peg.1770 CDS gi|480756742|gb|AQUY01000001.1| 812935 813675 1 + 741 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.65929.peg.1771 CDS gi|480756742|gb|AQUY01000001.1| 813730 814482 1 + 753 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.65929.peg.1772 CDS gi|480756742|gb|AQUY01000001.1| 814566 815471 3 + 906 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.65929.peg.1773 CDS gi|480756742|gb|AQUY01000001.1| 815472 817583 3 + 2112 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.65929.peg.1774 CDS gi|480756742|gb|AQUY01000001.1| 817657 818268 1 + 612 hypothetical protein - none -
fig|6666666.65929.peg.1775 CDS gi|480756742|gb|AQUY01000001.1| 818406 821408 3 + 3003 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.65929.peg.1776 CDS gi|480756742|gb|AQUY01000001.1| 821617 822672 1 + 1056 Integral membrane protein TerC - none -
fig|6666666.65929.peg.1777 CDS gi|480756742|gb|AQUY01000001.1| 822682 823242 1 + 561 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.1778 CDS gi|480756742|gb|AQUY01000001.1| 823353 823775 3 + 423 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin synthesis cluster
fig|6666666.65929.peg.1779 CDS gi|480756742|gb|AQUY01000001.1| 823780 824118 1 + 339 putative transcription regulator - none -
fig|6666666.65929.peg.1780 CDS gi|480756742|gb|AQUY01000001.1| 824160 825014 3 + 855 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.65929.peg.1781 CDS gi|480756742|gb|AQUY01000001.1| 825664 825056 -1 - 609 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65929.peg.1782 CDS gi|480756742|gb|AQUY01000001.1| 826356 825661 -3 - 696 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65929.peg.1783 CDS gi|480756742|gb|AQUY01000001.1| 826929 826363 -3 - 567 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.65929.peg.1784 CDS gi|480756742|gb|AQUY01000001.1| 827000 827206 2 + 207 hypothetical protein - none -
fig|6666666.65929.peg.1785 CDS gi|480756742|gb|AQUY01000001.1| 827433 828539 3 + 1107 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65929.peg.1786 CDS gi|480756742|gb|AQUY01000001.1| 828543 829157 3 + 615 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.65929.peg.1787 CDS gi|480756742|gb|AQUY01000001.1| 829190 830722 2 + 1533 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases
fig|6666666.65929.peg.1788 CDS gi|480756742|gb|AQUY01000001.1| 830736 831347 3 + 612 hypothetical protein - none -
fig|6666666.65929.peg.1789 CDS gi|480756742|gb|AQUY01000001.1| 831493 832929 1 + 1437 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.65929.peg.1790 CDS gi|480756742|gb|AQUY01000001.1| 834417 833041 -3 - 1377 ATPase involved in DNA repair - none -
fig|6666666.65929.peg.1791 CDS gi|480756742|gb|AQUY01000001.1| 834579 835205 3 + 627 hypothetical protein - none -
fig|6666666.65929.peg.1792 CDS gi|480756742|gb|AQUY01000001.1| 835202 836161 2 + 960 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.65929.peg.1793 CDS gi|480756742|gb|AQUY01000001.1| 836697 836176 -3 - 522 hypothetical protein - none -
fig|6666666.65929.peg.1794 CDS gi|480756742|gb|AQUY01000001.1| 837472 836711 -1 - 762 hypothetical protein - none -
fig|6666666.65929.peg.1795 CDS gi|480756742|gb|AQUY01000001.1| 837843 837493 -3 - 351 hypothetical protein - none -
fig|6666666.65929.peg.1796 CDS gi|480756742|gb|AQUY01000001.1| 837842 839095 2 + 1254 GTP-binding protein HflX Hfl operon
fig|6666666.65929.peg.1797 CDS gi|480756742|gb|AQUY01000001.1| 839137 840435 1 + 1299 xanthine/uracil permeases - none -
fig|6666666.65929.peg.1798 CDS gi|480756742|gb|AQUY01000001.1| 840978 840436 -3 - 543 hypothetical protein - none -
fig|6666666.65929.peg.1799 CDS gi|480756742|gb|AQUY01000001.1| 841826 841032 -2 - 795 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.65929.peg.1800 CDS gi|480756742|gb|AQUY01000001.1| 842729 842037 -2 - 693 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.65929.peg.1801 CDS gi|480756742|gb|AQUY01000001.1| 843097 843216 1 + 120 hypothetical protein - none -
fig|6666666.65929.peg.1802 CDS gi|480756742|gb|AQUY01000001.1| 843213 843527 3 + 315 hypothetical protein - none -
fig|6666666.65929.peg.1803 CDS gi|480756742|gb|AQUY01000001.1| 843767 844093 2 + 327 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.65929.peg.1804 CDS gi|480756742|gb|AQUY01000001.1| 848076 844105 -3 - 3972 ATP-dependent helicase HrpA - none -
fig|6666666.65929.peg.1805 CDS gi|480756742|gb|AQUY01000001.1| 848291 848425 2 + 135 hypothetical protein - none -
fig|6666666.65929.peg.1806 CDS gi|480756742|gb|AQUY01000001.1| 848591 850144 2 + 1554 FIG00545514: hypothetical protein - none -
fig|6666666.65929.peg.1807 CDS gi|480756742|gb|AQUY01000001.1| 852676 850154 -1 - 2523 putative helicase - none -
fig|6666666.65929.peg.1808 CDS gi|480756742|gb|AQUY01000001.1| 853721 852753 -2 - 969 FIG00544614: hypothetical protein - none -
fig|6666666.65929.peg.1809 CDS gi|480756742|gb|AQUY01000001.1| 853891 854976 1 + 1086 hypothetical protein - none -
fig|6666666.65929.peg.1810 CDS gi|480756742|gb|AQUY01000001.1| 856036 855047 -1 - 990 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.65929.peg.1811 CDS gi|480756742|gb|AQUY01000001.1| 856726 856040 -1 - 687 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.65929.peg.1812 CDS gi|480756742|gb|AQUY01000001.1| 857937 856948 -3 - 990 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.65929.peg.1813 CDS gi|480756742|gb|AQUY01000001.1| 858479 858045 -2 - 435 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.65929.peg.1814 CDS gi|480756742|gb|AQUY01000001.1| 860110 858488 -1 - 1623 Putative transferase - none -
fig|6666666.65929.peg.1815 CDS gi|480756742|gb|AQUY01000001.1| 860624 860103 -2 - 522 putative membrane protein - none -
fig|6666666.65929.peg.1816 CDS gi|480756742|gb|AQUY01000001.1| 860696 860947 2 + 252 FIG00998432: hypothetical protein - none -
fig|6666666.65929.peg.1817 CDS gi|480756742|gb|AQUY01000001.1| 860944 862665 1 + 1722 DNA or RNA helicases of superfamily II - none -
fig|6666666.65929.peg.1818 CDS gi|480756742|gb|AQUY01000001.1| 862712 863122 2 + 411 hypothetical protein - none -
fig|6666666.65929.peg.1819 CDS gi|480756742|gb|AQUY01000001.1| 863330 864889 2 + 1560 di- and tricarboxylate transporter - none -
fig|6666666.65929.peg.1820 CDS gi|480756742|gb|AQUY01000001.1| 866579 865038 -2 - 1542 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.65929.peg.1821 CDS gi|480756742|gb|AQUY01000001.1| 867482 866724 -2 - 759 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.65929.peg.1822 CDS gi|480756742|gb|AQUY01000001.1| 867510 868361 3 + 852 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.65929.peg.1823 CDS gi|480756742|gb|AQUY01000001.1| 869000 868368 -2 - 633 probable secreted alanine rich protein - none -
fig|6666666.65929.peg.1824 CDS gi|480756742|gb|AQUY01000001.1| 869226 869528 3 + 303 FIG00545109: hypothetical protein - none -
fig|6666666.65929.peg.1825 CDS gi|480756742|gb|AQUY01000001.1| 870042 869569 -3 - 474 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1826 CDS gi|480756742|gb|AQUY01000001.1| 870095 870580 2 + 486 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65929.peg.1827 CDS gi|480756742|gb|AQUY01000001.1| 870639 871373 3 + 735 CONSERVED HYPOTHETICAL ALANINE AND GLYCINE AND VALINE RICH PROTEIN - none -
fig|6666666.65929.peg.1828 CDS gi|480756742|gb|AQUY01000001.1| 871370 872596 2 + 1227 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.65929.peg.1829 CDS gi|480756742|gb|AQUY01000001.1| 872622 874568 3 + 1947 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.65929.peg.1830 CDS gi|480756742|gb|AQUY01000001.1| 875848 874541 -1 - 1308 Ribonuclease D (EC 3.1.26.3) - none -
fig|6666666.65929.peg.1831 CDS gi|480756742|gb|AQUY01000001.1| 876032 876985 2 + 954 Iron compound ABC transporter, periplasmic iron compound-binding protein - none -
fig|6666666.65929.peg.1832 CDS gi|480756742|gb|AQUY01000001.1| 877183 878139 1 + 957 Iron compound ABC transporter, periplasmic iron compound-binding protein - none -
fig|6666666.65929.peg.1833 CDS gi|480756742|gb|AQUY01000001.1| 878194 879081 1 + 888 Iron compound ABC transporter, permease protein - none -
fig|6666666.65929.peg.1834 CDS gi|480756742|gb|AQUY01000001.1| 879068 880036 2 + 969 Iron compound ABC transporter, permease protein - none -
fig|6666666.65929.peg.1835 CDS gi|480756742|gb|AQUY01000001.1| 880033 880914 1 + 882 Iron compound ABC transporter, ATP-binding protein - none -
fig|6666666.65929.peg.1836 CDS gi|480756742|gb|AQUY01000001.1| 881505 880927 -3 - 579 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.65929.peg.1837 CDS gi|480756742|gb|AQUY01000001.1| 881736 882695 3 + 960 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1838 CDS gi|480756742|gb|AQUY01000001.1| 882692 884122 2 + 1431 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1839 CDS gi|480756742|gb|AQUY01000001.1| 884196 884897 3 + 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1840 CDS gi|480756742|gb|AQUY01000001.1| 886036 884894 -1 - 1143 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.65929.peg.1841 CDS gi|480756742|gb|AQUY01000001.1| 886830 886033 -3 - 798 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.65929.peg.1842 CDS gi|480756742|gb|AQUY01000001.1| 887060 886833 -2 - 228 thiamine biosynthesis protein ThiS - none -
fig|6666666.65929.peg.1843 CDS gi|480756742|gb|AQUY01000001.1| 888229 887063 -1 - 1167 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.65929.peg.1844 CDS gi|480756742|gb|AQUY01000001.1| 888342 889025 3 + 684 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.65929.peg.1845 CDS gi|480756742|gb|AQUY01000001.1| 889398 889060 -3 - 339 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.65929.peg.1846 CDS gi|480756742|gb|AQUY01000001.1| 890716 889439 -1 - 1278 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.65929.peg.1847 CDS gi|480756742|gb|AQUY01000001.1| 891445 890717 -1 - 729 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.65929.peg.1848 CDS gi|480756742|gb|AQUY01000001.1| 892666 893211 1 + 546 Copper resistance protein CopC Copper Transport System;
Copper homeostasis
fig|6666666.65929.peg.1849 CDS gi|480756742|gb|AQUY01000001.1| 893204 893833 2 + 630 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.65929.peg.1850 CDS gi|480756742|gb|AQUY01000001.1| 893880 895100 3 + 1221 Dyp-type peroxidase family protein - none -
fig|6666666.65929.peg.1851 CDS gi|480756742|gb|AQUY01000001.1| 895177 897228 1 + 2052 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.65929.peg.1852 CDS gi|480756742|gb|AQUY01000001.1| 897377 897748 2 + 372 FIG049476: HIT family protein - none -
fig|6666666.65929.peg.1853 CDS gi|480756742|gb|AQUY01000001.1| 897751 898419 1 + 669 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.1854 CDS gi|480756742|gb|AQUY01000001.1| 898425 899384 3 + 960 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.65929.peg.1855 CDS gi|480756742|gb|AQUY01000001.1| 899385 900539 3 + 1155 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.65929.peg.1856 CDS gi|480756742|gb|AQUY01000001.1| 900728 900862 2 + 135 hypothetical protein - none -
fig|6666666.65929.peg.1857 CDS gi|480756742|gb|AQUY01000001.1| 900944 901843 2 + 900 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.65929.peg.1858 CDS gi|480756742|gb|AQUY01000001.1| 901943 902809 2 + 867 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.65929.peg.1859 CDS gi|480756742|gb|AQUY01000001.1| 902869 903615 1 + 747 FIG000859: hypothetical protein - none -
fig|6666666.65929.peg.1860 CDS gi|480756742|gb|AQUY01000001.1| 903718 904359 1 + 642 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.65929.peg.1861 CDS gi|480756742|gb|AQUY01000001.1| 904356 904985 3 + 630 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.65929.peg.1862 CDS gi|480756742|gb|AQUY01000001.1| 904998 906065 3 + 1068 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.65929.peg.1863 CDS gi|480756742|gb|AQUY01000001.1| 906126 906455 3 + 330 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.65929.peg.1864 CDS gi|480756742|gb|AQUY01000001.1| 906542 908413 2 + 1872 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.65929.peg.1865 CDS gi|480756742|gb|AQUY01000001.1| 908416 909585 1 + 1170 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.65929.peg.1866 CDS gi|480756742|gb|AQUY01000001.1| 909588 911201 3 + 1614 dipeptide-binding protein DciAE - none -
fig|6666666.65929.peg.1867 CDS gi|480756742|gb|AQUY01000001.1| 911188 911754 1 + 567 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.65929.peg.1868 CDS gi|480756742|gb|AQUY01000001.1| 911825 914002 2 + 2178 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.65929.peg.1869 CDS gi|480756742|gb|AQUY01000001.1| 915002 914106 -2 - 897 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.65929.peg.1870 CDS gi|480756742|gb|AQUY01000001.1| 915135 915797 3 + 663 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.65929.peg.1871 CDS gi|480756742|gb|AQUY01000001.1| 915825 917105 3 + 1281 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.65929.peg.1872 CDS gi|480756742|gb|AQUY01000001.1| 917801 917133 -2 - 669 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.65929.peg.1873 CDS gi|480756742|gb|AQUY01000001.1| 918948 917833 -3 - 1116 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.65929.peg.1874 CDS gi|480756742|gb|AQUY01000001.1| 919793 919053 -2 - 741 Putative CBS domain containing protein - none -
fig|6666666.65929.peg.1875 CDS gi|480756742|gb|AQUY01000001.1| 920741 919821 -2 - 921 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.65929.peg.1876 CDS gi|480756742|gb|AQUY01000001.1| 921743 921219 -2 - 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.65929.peg.1877 CDS gi|480756742|gb|AQUY01000001.1| 922343 921747 -2 - 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.65929.peg.1878 CDS gi|480756742|gb|AQUY01000001.1| 922636 923448 1 + 813 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.65929.peg.1879 CDS gi|480756742|gb|AQUY01000001.1| 924434 923496 -2 - 939 putative secreted protein - none -
fig|6666666.65929.peg.1880 CDS gi|480756742|gb|AQUY01000001.1| 925319 924462 -2 - 858 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.65929.peg.1881 CDS gi|480756742|gb|AQUY01000001.1| 925615 925418 -1 - 198 hypothetical protein - none -
fig|6666666.65929.peg.1882 CDS gi|480756742|gb|AQUY01000001.1| 925580 927253 2 + 1674 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.65929.peg.1883 CDS gi|480756742|gb|AQUY01000001.1| 927299 928507 2 + 1209 FIG00544116: hypothetical protein - none -
fig|6666666.65929.peg.1884 CDS gi|480756742|gb|AQUY01000001.1| 928510 929880 1 + 1371 ATPase, AAA family - none -
fig|6666666.65929.peg.1885 CDS gi|480756742|gb|AQUY01000001.1| 929981 932653 2 + 2673 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.65929.peg.1886 CDS gi|480756742|gb|AQUY01000001.1| 932657 933181 2 + 525 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.65929.peg.1887 CDS gi|480756742|gb|AQUY01000001.1| 933293 934447 2 + 1155 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.65929.peg.1888 CDS gi|480756742|gb|AQUY01000001.1| 934472 935368 2 + 897 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65929.peg.1889 CDS gi|480756742|gb|AQUY01000001.1| 935405 935914 2 + 510 hypothetical protein - none -
fig|6666666.65929.peg.1890 CDS gi|480756742|gb|AQUY01000001.1| 935952 937148 3 + 1197 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65929.peg.1891 CDS gi|480756742|gb|AQUY01000001.1| 937145 937657 2 + 513 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65929.peg.1892 CDS gi|480756742|gb|AQUY01000001.1| 937685 938767 2 + 1083 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.65929.peg.1893 CDS gi|480756742|gb|AQUY01000001.1| 938777 939232 2 + 456 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.65929.peg.1894 CDS gi|480756742|gb|AQUY01000001.1| 939238 940347 1 + 1110 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.65929.peg.1895 CDS gi|480756742|gb|AQUY01000001.1| 940455 941018 3 + 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.65929.peg.1896 CDS gi|480756742|gb|AQUY01000001.1| 941022 941705 3 + 684 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.65929.peg.1897 CDS gi|480756742|gb|AQUY01000001.1| 941742 942611 3 + 870 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.65929.peg.1898 CDS gi|480756742|gb|AQUY01000001.1| 942734 943330 2 + 597 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.65929.peg.1899 CDS gi|480756742|gb|AQUY01000001.1| 943336 944280 1 + 945 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.65929.peg.1900 CDS gi|480756742|gb|AQUY01000001.1| 944284 945639 1 + 1356 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis;
Zinc regulated enzymes
fig|6666666.65929.peg.1901 CDS gi|480756742|gb|AQUY01000001.1| 945672 946787 3 + 1116 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65929.peg.1902 CDS gi|480756742|gb|AQUY01000001.1| 946792 950139 1 + 3348 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.65929.peg.1903 CDS gi|480756742|gb|AQUY01000001.1| 950151 950996 3 + 846 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.65929.peg.1904 CDS gi|480756742|gb|AQUY01000001.1| 951152 951478 2 + 327 integration host factor - none -
fig|6666666.65929.peg.1905 CDS gi|480756742|gb|AQUY01000001.1| 951485 952138 2 + 654 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.65929.peg.1906 CDS gi|480756742|gb|AQUY01000001.1| 952166 952459 2 + 294 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.65929.peg.1907 CDS gi|480756742|gb|AQUY01000001.1| 952472 953722 2 + 1251 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.65929.peg.1908 CDS gi|480756742|gb|AQUY01000001.1| 953829 955040 3 + 1212 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis
fig|6666666.65929.peg.1909 CDS gi|480756742|gb|AQUY01000001.1| 955045 957081 1 + 2037 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.65929.peg.1910 CDS gi|480756742|gb|AQUY01000001.1| 957142 957642 1 + 501 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.65929.peg.1911 CDS gi|480756742|gb|AQUY01000001.1| 957674 958615 2 + 942 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.65929.peg.1912 CDS gi|480756742|gb|AQUY01000001.1| 958615 960075 1 + 1461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.65929.peg.1913 CDS gi|480756742|gb|AQUY01000001.1| 960085 960753 1 + 669 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.65929.peg.1914 CDS gi|480756742|gb|AQUY01000001.1| 960755 961783 2 + 1029 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.65929.peg.1915 CDS gi|480756742|gb|AQUY01000001.1| 961839 962264 3 + 426 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.65929.peg.1916 CDS gi|480756742|gb|AQUY01000001.1| 962267 962854 2 + 588 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65929.peg.1917 CDS gi|480756742|gb|AQUY01000001.1| 962865 964166 3 + 1302 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.65929.peg.1918 CDS gi|480756742|gb|AQUY01000001.1| 964208 964651 2 + 444 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.65929.peg.1919 CDS gi|480756742|gb|AQUY01000001.1| 964681 965190 1 + 510 POSSIBLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1920 CDS gi|480756742|gb|AQUY01000001.1| 965201 967174 2 + 1974 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.65929.peg.1921 CDS gi|480756742|gb|AQUY01000001.1| 967167 968069 3 + 903 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.65929.peg.1922 CDS gi|480756742|gb|AQUY01000001.1| 968076 969029 3 + 954 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.65929.peg.1923 CDS gi|480756742|gb|AQUY01000001.1| 969153 970052 3 + 900 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.65929.peg.1924 CDS gi|480756742|gb|AQUY01000001.1| 970189 971193 1 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.65929.peg.1925 CDS gi|480756742|gb|AQUY01000001.1| 971316 972527 3 + 1212 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.65929.peg.1926 CDS gi|480756742|gb|AQUY01000001.1| 972595 973395 1 + 801 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.65929.peg.1927 CDS gi|480756742|gb|AQUY01000001.1| 973446 976244 3 + 2799 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Fermentations: Mixed acid;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.65929.peg.1928 CDS gi|480756742|gb|AQUY01000001.1| 976337 976573 2 + 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.65929.peg.1929 CDS gi|480756742|gb|AQUY01000001.1| 977340 976612 -3 - 729 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.65929.peg.1930 CDS gi|480756742|gb|AQUY01000001.1| 978399 977425 -3 - 975 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.65929.peg.1931 CDS gi|480756742|gb|AQUY01000001.1| 979973 978444 -2 - 1530 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.65929.peg.1932 CDS gi|480756742|gb|AQUY01000001.1| 981214 980039 -1 - 1176 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.65929.peg.1933 CDS gi|480756742|gb|AQUY01000001.1| 983373 981280 -3 - 2094 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.65929.peg.1934 CDS gi|480756742|gb|AQUY01000001.1| 983565 984497 3 + 933 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.65929.peg.1935 CDS gi|480756742|gb|AQUY01000001.1| 985632 984622 -3 - 1011 Cytochrome oxidase assembly protein - none -
fig|6666666.65929.peg.1936 CDS gi|480756742|gb|AQUY01000001.1| 986418 985726 -3 - 693 Trk system potassium uptake protein TrkA Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.65929.peg.1937 CDS gi|480756742|gb|AQUY01000001.1| 987742 986411 -1 - 1332 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.65929.peg.1938 CDS gi|480756742|gb|AQUY01000001.1| 988595 987801 -2 - 795 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.65929.peg.1939 CDS gi|480756742|gb|AQUY01000001.1| 989563 988592 -1 - 972 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.65929.peg.1940 CDS gi|480756742|gb|AQUY01000001.1| 991335 989548 -3 - 1788 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.65929.peg.1941 CDS gi|480756742|gb|AQUY01000001.1| 991485 992198 3 + 714 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65929.peg.1942 CDS gi|480756742|gb|AQUY01000001.1| 992195 993643 2 + 1449 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65929.peg.1943 CDS gi|480756742|gb|AQUY01000001.1| 993649 994821 1 + 1173 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65929.peg.1944 CDS gi|480756742|gb|AQUY01000001.1| 994872 995639 3 + 768 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.65929.peg.1945 CDS gi|480756742|gb|AQUY01000001.1| 995639 996907 2 + 1269 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.65929.peg.1946 CDS gi|480756742|gb|AQUY01000001.1| 996938 997402 2 + 465 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.65929.peg.1947 CDS gi|480756742|gb|AQUY01000001.1| 997395 997841 3 + 447 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.65929.peg.1948 CDS gi|480756742|gb|AQUY01000001.1| 999413 997947 -2 - 1467 Lysine-specific permease - none -
fig|6666666.65929.peg.1949 CDS gi|480756742|gb|AQUY01000001.1| 1000560 999652 -3 - 909 hypothetical protein - none -
fig|6666666.65929.peg.1950 CDS gi|480756742|gb|AQUY01000001.1| 1000916 1002544 2 + 1629 ABC transporter ATP-binding protein - none -
fig|6666666.65929.peg.1951 CDS gi|480756742|gb|AQUY01000001.1| 1002613 1003794 1 + 1182 hypothetical protein - none -
fig|6666666.65929.peg.1952 CDS gi|480756742|gb|AQUY01000001.1| 1004593 1003820 -1 - 774 Glutamine amidotransferase class-I - none -
fig|6666666.65929.peg.1953 CDS gi|480756742|gb|AQUY01000001.1| 1008138 1004623 -3 - 3516 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Aromatic amino acid interconversions with aryl acids
fig|6666666.65929.peg.1954 CDS gi|480756742|gb|AQUY01000001.1| 1008368 1008847 2 + 480 Transcriptional regulator, AsnC family - none -
fig|6666666.65929.peg.1955 CDS gi|480756742|gb|AQUY01000001.1| 1011833 1008978 -2 - 2856 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.65929.peg.1956 CDS gi|480756742|gb|AQUY01000001.1| 1012065 1012541 3 + 477 hypothetical protein - none -
fig|6666666.65929.peg.1957 CDS gi|480756742|gb|AQUY01000001.1| 1012941 1014683 3 + 1743 secreted transglycosylase - none -
fig|6666666.65929.peg.1958 CDS gi|480756742|gb|AQUY01000001.1| 1014759 1015721 3 + 963 FIG022979: MoxR-like ATPases - none -
fig|6666666.65929.peg.1959 CDS gi|480756742|gb|AQUY01000001.1| 1015755 1016627 3 + 873 hypothetical protein - none -
fig|6666666.65929.peg.1960 CDS gi|480756742|gb|AQUY01000001.1| 1016636 1017643 2 + 1008 hypothetical protein - none -
fig|6666666.65929.peg.1961 CDS gi|480756742|gb|AQUY01000001.1| 1017653 1018708 2 + 1056 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.65929.peg.1962 CDS gi|480756742|gb|AQUY01000001.1| 1019504 1018725 -2 - 780 hypothetical protein - none -
fig|6666666.65929.peg.1963 CDS gi|480756742|gb|AQUY01000001.1| 1019677 1020423 1 + 747 FIG00544636: hypothetical protein - none -
fig|6666666.65929.peg.1964 CDS gi|480756742|gb|AQUY01000001.1| 1020515 1020868 2 + 354 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.65929.peg.1965 CDS gi|480756742|gb|AQUY01000001.1| 1020872 1022245 2 + 1374 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.65929.peg.1966 CDS gi|480756742|gb|AQUY01000001.1| 1022845 1022267 -1 - 579 FIG00545282: hypothetical protein - none -
fig|6666666.65929.peg.1967 CDS gi|480756742|gb|AQUY01000001.1| 1023667 1022963 -1 - 705 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.65929.peg.1968 CDS gi|480756742|gb|AQUY01000001.1| 1023739 1024164 1 + 426 Mannose-6-phosphate isomerase - none -
fig|6666666.65929.peg.1969 CDS gi|480756742|gb|AQUY01000001.1| 1024189 1025679 1 + 1491 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.1970 CDS gi|480756742|gb|AQUY01000001.1| 1026794 1025997 -2 - 798 hypothetical protein - none -
fig|6666666.65929.peg.1971 CDS gi|480756742|gb|AQUY01000001.1| 1027042 1027530 1 + 489 Phospholipid-binding protein - none -
fig|6666666.65929.peg.1972 CDS gi|480756742|gb|AQUY01000001.1| 1028694 1027585 -3 - 1110 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.65929.peg.1973 CDS gi|480756742|gb|AQUY01000001.1| 1029866 1028730 -2 - 1137 prolipoprotein LppL - none -
fig|6666666.65929.peg.1974 CDS gi|480756742|gb|AQUY01000001.1| 1030814 1029918 -2 - 897 putative oxidoreductase - none -
fig|6666666.65929.peg.1975 CDS gi|480756742|gb|AQUY01000001.1| 1030911 1031771 3 + 861 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.65929.peg.1976 CDS gi|480756742|gb|AQUY01000001.1| 1031853 1033082 3 + 1230 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.65929.peg.1977 CDS gi|480756742|gb|AQUY01000001.1| 1033092 1033514 3 + 423 FIG00543988: hypothetical protein - none -
fig|6666666.65929.peg.1978 CDS gi|480756742|gb|AQUY01000001.1| 1034324 1033521 -2 - 804 TesB-like acyl-CoA thioesterase 5 Acyl-CoA thioesterase II
fig|6666666.65929.peg.1979 CDS gi|480756742|gb|AQUY01000001.1| 1034418 1035143 3 + 726 HAD-superfamily hydrolase, subfamily IA, variant 3 - none -
fig|6666666.65929.peg.1980 CDS gi|480756742|gb|AQUY01000001.1| 1035155 1035427 2 + 273 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65929.peg.1981 CDS gi|480756742|gb|AQUY01000001.1| 1035465 1036310 3 + 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.65929.peg.1982 CDS gi|480756742|gb|AQUY01000001.1| 1036330 1037805 1 + 1476 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.65929.peg.1983 CDS gi|480756742|gb|AQUY01000001.1| 1038440 1037844 -2 - 597 Transcriptional regulator, TetR family - none -
fig|6666666.65929.peg.1984 CDS gi|480756742|gb|AQUY01000001.1| 1039328 1038507 -2 - 822 RecB family exonuclease - none -
fig|6666666.65929.peg.1985 CDS gi|480756742|gb|AQUY01000001.1| 1039568 1039401 -2 - 168 hypothetical protein - none -
fig|6666666.65929.peg.1986 CDS gi|480756742|gb|AQUY01000001.1| 1039600 1040721 1 + 1122 putative secreted protein - none -
fig|6666666.65929.peg.1987 CDS gi|480756742|gb|AQUY01000001.1| 1040782 1041618 1 + 837 RNA methyltransferase - none -
fig|6666666.65929.peg.1988 CDS gi|480756742|gb|AQUY01000001.1| 1041653 1043251 2 + 1599 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65929.peg.1989 CDS gi|480756742|gb|AQUY01000001.1| 1043251 1044759 1 + 1509 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65929.peg.1990 CDS gi|480756742|gb|AQUY01000001.1| 1044778 1044975 1 + 198 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65929.peg.1991 CDS gi|480756742|gb|AQUY01000001.1| 1045000 1046397 1 + 1398 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.65929.peg.1992 CDS gi|480756742|gb|AQUY01000001.1| 1046416 1048626 1 + 2211 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65929.peg.1993 CDS gi|480756742|gb|AQUY01000001.1| 1048671 1048943 3 + 273 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65929.peg.1994 CDS gi|480756742|gb|AQUY01000001.1| 1049088 1050206 3 + 1119 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.65929.peg.1995 CDS gi|480756742|gb|AQUY01000001.1| 1050281 1053328 2 + 3048 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.65929.peg.1996 CDS gi|480756742|gb|AQUY01000001.1| 1053351 1054094 3 + 744 oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.65929.peg.1997 CDS gi|480756742|gb|AQUY01000001.1| 1054121 1054768 2 + 648 Cobalt-precorrin-6x reductase (EC 1.3.1.54) - none -
fig|6666666.65929.peg.1998 CDS gi|480756742|gb|AQUY01000001.1| 1055304 1056236 3 + 933 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.65929.peg.1999 CDS gi|480756742|gb|AQUY01000001.1| 1057303 1056233 -1 - 1071 Cobalamin biosynthesis protein CobG - none -
fig|6666666.65929.peg.2000 CDS gi|480756742|gb|AQUY01000001.1| 1057395 1059053 3 + 1659 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65929.peg.2001 CDS gi|480756742|gb|AQUY01000001.1| 1059037 1059873 1 + 837 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65929.peg.2002 CDS gi|480756742|gb|AQUY01000001.1| 1060339 1059992 -1 - 348 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.65929.peg.2003 CDS gi|480756742|gb|AQUY01000001.1| 1060631 1060807 2 + 177 hypothetical protein - none -
fig|6666666.65929.peg.2004 CDS gi|480756742|gb|AQUY01000001.1| 1060952 1061593 2 + 642 Putative secreted protein - none -
fig|6666666.65929.peg.2005 CDS gi|480756742|gb|AQUY01000001.1| 1061677 1062030 1 + 354 hypothetical protein - none -
fig|6666666.65929.peg.2006 CDS gi|480756742|gb|AQUY01000001.1| 1062829 1062137 -1 - 693 putative integral membrane protein - none -
fig|6666666.65929.peg.2007 CDS gi|480756742|gb|AQUY01000001.1| 1062903 1063868 3 + 966 hypothetical protein - none -
fig|6666666.65929.peg.2008 CDS gi|480756742|gb|AQUY01000001.1| 1065353 1064856 -2 - 498 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.65929.peg.2009 CDS gi|480756742|gb|AQUY01000001.1| 1065573 1065397 -3 - 177 hypothetical protein - none -
fig|6666666.65929.peg.2010 CDS gi|480756742|gb|AQUY01000001.1| 1065661 1066005 1 + 345 hypothetical protein - none -
fig|6666666.65929.peg.2011 CDS gi|480756742|gb|AQUY01000001.1| 1066045 1066413 1 + 369 hypothetical protein - none -
fig|6666666.65929.peg.2012 CDS gi|480756742|gb|AQUY01000001.1| 1066440 1066766 3 + 327 hypothetical protein - none -
fig|6666666.65929.peg.2013 CDS gi|480756742|gb|AQUY01000001.1| 1067004 1067123 3 + 120 hypothetical protein - none -
fig|6666666.65929.peg.2014 CDS gi|480756742|gb|AQUY01000001.1| 1067559 1067239 -3 - 321 hypothetical protein - none -
fig|6666666.65929.peg.2015 CDS gi|480756742|gb|AQUY01000001.1| 1067804 1067556 -2 - 249 hypothetical protein - none -
fig|6666666.65929.peg.2016 CDS gi|480756742|gb|AQUY01000001.1| 1068333 1067953 -3 - 381 hypothetical protein - none -
fig|6666666.65929.peg.2017 CDS gi|480756742|gb|AQUY01000001.1| 1069697 1068330 -2 - 1368 hypothetical protein - none -
fig|6666666.65929.peg.2018 CDS gi|480756742|gb|AQUY01000001.1| 1069866 1069747 -3 - 120 hypothetical protein - none -
fig|6666666.65929.peg.2019 CDS gi|480756742|gb|AQUY01000001.1| 1070223 1069876 -3 - 348 hypothetical protein - none -
fig|6666666.65929.peg.2020 CDS gi|480756742|gb|AQUY01000001.1| 1071619 1070228 -1 - 1392 hypothetical protein - none -
fig|6666666.65929.peg.2021 CDS gi|480756742|gb|AQUY01000001.1| 1072336 1071665 -1 - 672 hypothetical protein - none -
fig|6666666.65929.peg.2022 CDS gi|480756742|gb|AQUY01000001.1| 1073009 1072428 -2 - 582 hypothetical protein - none -
fig|6666666.65929.peg.2023 CDS gi|480756742|gb|AQUY01000001.1| 1074654 1073020 -3 - 1635 hypothetical protein - none -
fig|6666666.65929.peg.2024 CDS gi|480756742|gb|AQUY01000001.1| 1080311 1075512 -2 - 4800 Phage endolysin Phage lysis modules
fig|6666666.65929.peg.2025 CDS gi|480756742|gb|AQUY01000001.1| 1080559 1080338 -1 - 222 hypothetical protein - none -
fig|6666666.65929.peg.2026 CDS gi|480756742|gb|AQUY01000001.1| 1081044 1080697 -3 - 348 hypothetical protein - none -
fig|6666666.65929.peg.2027 CDS gi|480756742|gb|AQUY01000001.1| 1081821 1081141 -3 - 681 hypothetical protein - none -
fig|6666666.65929.peg.2028 CDS gi|480756742|gb|AQUY01000001.1| 1082481 1082209 -3 - 273 hypothetical protein - none -
fig|6666666.65929.peg.2029 CDS gi|480756742|gb|AQUY01000001.1| 1082810 1082481 -2 - 330 hypothetical protein - none -
fig|6666666.65929.peg.2030 CDS gi|480756742|gb|AQUY01000001.1| 1083271 1082810 -1 - 462 hypothetical protein - none -
fig|6666666.65929.peg.2031 CDS gi|480756742|gb|AQUY01000001.1| 1083653 1083291 -2 - 363 hypothetical protein - none -
fig|6666666.65929.peg.2032 CDS gi|480756742|gb|AQUY01000001.1| 1084605 1083667 -3 - 939 Phage protein - none -
fig|6666666.65929.peg.2033 CDS gi|480756742|gb|AQUY01000001.1| 1084997 1084617 -2 - 381 hypothetical protein - none -
fig|6666666.65929.peg.2034 CDS gi|480756742|gb|AQUY01000001.1| 1086476 1084998 -2 - 1479 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.65929.peg.2035 CDS gi|480756742|gb|AQUY01000001.1| 1087774 1086473 -1 - 1302 hypothetical protein - none -
fig|6666666.65929.peg.2036 CDS gi|480756742|gb|AQUY01000001.1| 1089389 1087767 -2 - 1623 Phage terminase - none -
fig|6666666.65929.peg.2037 CDS gi|480756742|gb|AQUY01000001.1| 1089690 1089343 -3 - 348 hypothetical protein - none -
fig|6666666.65929.peg.2038 CDS gi|480756742|gb|AQUY01000001.1| 1090205 1089846 -2 - 360 hypothetical protein - none -
fig|6666666.65929.peg.2039 CDS gi|480756742|gb|AQUY01000001.1| 1091354 1090872 -2 - 483 hypothetical protein - none -
fig|6666666.65929.peg.2040 CDS gi|480756742|gb|AQUY01000001.1| 1091435 1091575 2 + 141 hypothetical protein - none -
fig|6666666.65929.peg.2041 CDS gi|480756742|gb|AQUY01000001.1| 1092816 1092109 -3 - 708 pentapeptide repeat family protein - none -
fig|6666666.65929.peg.2042 CDS gi|480756742|gb|AQUY01000001.1| 1092977 1092813 -2 - 165 hypothetical protein - none -
fig|6666666.65929.peg.2043 CDS gi|480756742|gb|AQUY01000001.1| 1093467 1092988 -3 - 480 Phage Holliday junction resolvase - none -
fig|6666666.65929.peg.2044 CDS gi|480756742|gb|AQUY01000001.1| 1094342 1094124 -2 - 219 hypothetical protein - none -
fig|6666666.65929.peg.2045 CDS gi|480756742|gb|AQUY01000001.1| 1095099 1094962 -3 - 138 hypothetical protein - none -
fig|6666666.65929.peg.2046 CDS gi|480756742|gb|AQUY01000001.1| 1097134 1096268 -1 - 867 hypothetical protein - none -
fig|6666666.65929.peg.2047 CDS gi|480756742|gb|AQUY01000001.1| 1097529 1097134 -3 - 396 hypothetical protein - none -
fig|6666666.65929.peg.2048 CDS gi|480756742|gb|AQUY01000001.1| 1097773 1097510 -1 - 264 hypothetical protein - none -
fig|6666666.65929.peg.2049 CDS gi|480756742|gb|AQUY01000001.1| 1098810 1098250 -3 - 561 hypothetical protein - none -
fig|6666666.65929.peg.2050 CDS gi|480756742|gb|AQUY01000001.1| 1098962 1098810 -2 - 153 hypothetical protein - none -
fig|6666666.65929.peg.2051 CDS gi|480756742|gb|AQUY01000001.1| 1100113 1099262 -1 - 852 Phage virulence-associated protein - none -
fig|6666666.65929.peg.2052 CDS gi|480756742|gb|AQUY01000001.1| 1101221 1100181 -2 - 1041 Phage-related protein - none -
fig|6666666.65929.peg.2053 CDS gi|480756742|gb|AQUY01000001.1| 1101724 1101563 -1 - 162 hypothetical protein - none -
fig|6666666.65929.peg.2054 CDS gi|480756742|gb|AQUY01000001.1| 1102213 1101959 -1 - 255 hypothetical protein - none -
fig|6666666.65929.peg.2055 CDS gi|480756742|gb|AQUY01000001.1| 1102352 1102206 -2 - 147 hypothetical protein - none -
fig|6666666.65929.peg.2056 CDS gi|480756742|gb|AQUY01000001.1| 1102731 1102342 -3 - 390 hypothetical protein - none -
fig|6666666.65929.peg.2057 CDS gi|480756742|gb|AQUY01000001.1| 1102870 1102709 -1 - 162 hypothetical protein - none -
fig|6666666.65929.peg.2058 CDS gi|480756742|gb|AQUY01000001.1| 1103612 1103022 -2 - 591 hypothetical protein - none -
fig|6666666.65929.peg.2059 CDS gi|480756742|gb|AQUY01000001.1| 1103821 1103639 -1 - 183 hypothetical protein - none -
fig|6666666.65929.peg.2060 CDS gi|480756742|gb|AQUY01000001.1| 1105264 1104539 -1 - 726 Phage antirepressor protein - none -
fig|6666666.65929.peg.2061 CDS gi|480756742|gb|AQUY01000001.1| 1105556 1105323 -2 - 234 hypothetical protein - none -
fig|6666666.65929.peg.2062 CDS gi|480756742|gb|AQUY01000001.1| 1105849 1106154 1 + 306 hypothetical protein - none -
fig|6666666.65929.peg.2063 CDS gi|480756742|gb|AQUY01000001.1| 1106151 1106546 3 + 396 No significant database matches - none -
fig|6666666.65929.peg.2064 CDS gi|480756742|gb|AQUY01000001.1| 1106572 1106856 1 + 285 hypothetical protein - none -
fig|6666666.65929.peg.2065 CDS gi|480756742|gb|AQUY01000001.1| 1106983 1108143 1 + 1161 Integrase - none -
fig|6666666.65929.peg.2066 CDS gi|480756742|gb|AQUY01000001.1| 1108278 1108556 3 + 279 Transcriptional regulator, AsnC family - none -
fig|6666666.65929.peg.2067 CDS gi|480756742|gb|AQUY01000001.1| 1108566 1109123 3 + 558 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.65929.peg.2068 CDS gi|480756742|gb|AQUY01000001.1| 1110909 1109083 -3 - 1827 Fumarate/succinate/L-aspartate dehydrogenases - none -
fig|6666666.65929.peg.2069 CDS gi|480756742|gb|AQUY01000001.1| 1112277 1111036 -3 - 1242 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.65929.peg.2070 CDS gi|480756742|gb|AQUY01000001.1| 1112524 1113924 1 + 1401 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.65929.peg.2071 CDS gi|480756742|gb|AQUY01000001.1| 1114403 1113921 -2 - 483 hypothetical protein - none -
fig|6666666.65929.peg.2072 CDS gi|480756742|gb|AQUY01000001.1| 1114537 1116021 1 + 1485 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pentose phosphate pathway
fig|6666666.65929.peg.2073 CDS gi|480756742|gb|AQUY01000001.1| 1116043 1117410 1 + 1368 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.65929.peg.2074 CDS gi|480756742|gb|AQUY01000001.1| 1117419 1118807 3 + 1389 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.65929.peg.2075 CDS gi|480756742|gb|AQUY01000001.1| 1118800 1119858 1 + 1059 FIG00546228: hypothetical protein - none -
fig|6666666.65929.peg.2076 CDS gi|480756742|gb|AQUY01000001.1| 1119896 1120738 2 + 843 hypothetical protein - none -
fig|6666666.65929.peg.2077 CDS gi|480756742|gb|AQUY01000001.1| 1120776 1122320 3 + 1545 hypothetical protein - none -
fig|6666666.65929.peg.2078 CDS gi|480756742|gb|AQUY01000001.1| 1122866 1122327 -2 - 540 FIG00544641: hypothetical protein - none -
fig|6666666.65929.peg.2079 CDS gi|480756742|gb|AQUY01000001.1| 1123576 1123025 -1 - 552 hypothetical protein - none -
fig|6666666.65929.peg.2080 CDS gi|480756742|gb|AQUY01000001.1| 1124281 1123577 -1 - 705 hypothetical protein - none -
fig|6666666.65929.peg.2081 CDS gi|480756742|gb|AQUY01000001.1| 1124782 1124351 -1 - 432 FIG00672531: hypothetical protein - none -
fig|6666666.65929.peg.2082 CDS gi|480756742|gb|AQUY01000001.1| 1125600 1124947 -3 - 654 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.65929.peg.2083 CDS gi|480756742|gb|AQUY01000001.1| 1127885 1125600 -2 - 2286 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.65929.peg.2084 CDS gi|480756742|gb|AQUY01000001.1| 1128021 1128500 3 + 480 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.65929.peg.2085 CDS gi|480756742|gb|AQUY01000001.1| 1129220 1128510 -2 - 711 hypothetical protein - none -
fig|6666666.65929.peg.2086 CDS gi|480756742|gb|AQUY01000001.1| 1129752 1129267 -3 - 486 hypothetical protein - none -
fig|6666666.65929.peg.2087 CDS gi|480756742|gb|AQUY01000001.1| 1129923 1132334 3 + 2412 putative DNA helicase - none -
fig|6666666.65929.peg.2088 CDS gi|480756742|gb|AQUY01000001.1| 1132428 1133837 3 + 1410 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.65929.peg.2089 CDS gi|480756742|gb|AQUY01000001.1| 1133853 1135073 3 + 1221 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) Valine degradation
fig|6666666.65929.peg.2090 CDS gi|480756742|gb|AQUY01000001.1| 1136698 1135193 -1 - 1506 sodium/glutamate symporter - none -
fig|6666666.65929.peg.2091 CDS gi|480756742|gb|AQUY01000001.1| 1136953 1138584 1 + 1632 putative transport protein - none -
fig|6666666.65929.peg.2092 CDS gi|480756742|gb|AQUY01000001.1| 1140146 1138620 -2 - 1527 GTP-binding protein EngA - none -
fig|6666666.65929.peg.2093 CDS gi|480756742|gb|AQUY01000001.1| 1140837 1140139 -3 - 699 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.65929.peg.2094 CDS gi|480756742|gb|AQUY01000001.1| 1141712 1140837 -2 - 876 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.65929.peg.2095 CDS gi|480756742|gb|AQUY01000001.1| 1142499 1141783 -3 - 717 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65929.peg.2096 CDS gi|480756742|gb|AQUY01000001.1| 1143734 1142496 -2 - 1239 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.65929.peg.2097 CDS gi|480756742|gb|AQUY01000001.1| 1144482 1143904 -3 - 579 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.65929.peg.2098 CDS gi|480756742|gb|AQUY01000001.1| 1145315 1144509 -2 - 807 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.65929.peg.2099 CDS gi|480756742|gb|AQUY01000001.1| 1146197 1145319 -2 - 879 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.65929.peg.2100 CDS gi|480756742|gb|AQUY01000001.1| 1147220 1146285 -2 - 936 Tyrosine recombinase XerD - none -
fig|6666666.65929.peg.2101 CDS gi|480756742|gb|AQUY01000001.1| 1147956 1147273 -3 - 684 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.65929.peg.2102 CDS gi|480756742|gb|AQUY01000001.1| 1148959 1148006 -1 - 954 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.65929.peg.2103 CDS gi|480756742|gb|AQUY01000001.1| 1150164 1148977 -3 - 1188 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.65929.peg.2104 CDS gi|480756742|gb|AQUY01000001.1| 1152015 1150270 -3 - 1746 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.65929.peg.2105 CDS gi|480756742|gb|AQUY01000001.1| 1153035 1152037 -3 - 999 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.65929.peg.2106 CDS gi|480756742|gb|AQUY01000001.1| 1153859 1153032 -2 - 828 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.65929.peg.2107 CDS gi|480756742|gb|AQUY01000001.1| 1154009 1153860 -2 - 150 hypothetical protein - none -
fig|6666666.65929.peg.2108 CDS gi|480756742|gb|AQUY01000001.1| 1155102 1154080 -3 - 1023 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.65929.peg.2109 CDS gi|480756742|gb|AQUY01000001.1| 1156119 1155109 -3 - 1011 TPR-repeat-containing protein - none -
fig|6666666.65929.peg.2110 CDS gi|480756742|gb|AQUY01000001.1| 1157103 1156231 -3 - 873 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.65929.peg.2111 CDS gi|480756742|gb|AQUY01000001.1| 1157392 1158231 1 + 840 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) ## LSU Psi955, Psi2504 and Psi2580 RNA pseudouridine syntheses
fig|6666666.65929.rna.1 RNA gi|480756716|gb|AQUY01000006.1| 1509 42 -3 - 1468 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.65929.rna.2 RNA gi|480756721|gb|AQUY01000005.1| 1 2732 1 + 2732 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.65929.rna.3 RNA gi|480756726|gb|AQUY01000004.1| 59582 59655 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.65929.rna.4 RNA gi|480756726|gb|AQUY01000004.1| 59672 59744 2 + 73 tRNA-Ala-TGC - none -
fig|6666666.65929.rna.5 RNA gi|480756726|gb|AQUY01000004.1| 77953 78037 1 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.65929.rna.6 RNA gi|480756726|gb|AQUY01000004.1| 165655 165739 1 + 85 tRNA-Ser-TGA - none -
fig|6666666.65929.rna.7 RNA gi|480756726|gb|AQUY01000004.1| 169012 169100 1 + 89 tRNA-Ser-GCT - none -
fig|6666666.65929.rna.8 RNA gi|480756726|gb|AQUY01000004.1| 173833 173905 1 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.65929.rna.9 RNA gi|480756726|gb|AQUY01000004.1| 179864 179951 2 + 88 tRNA-Ser-CGA tRNAs
fig|6666666.65929.rna.10 RNA gi|480756730|gb|AQUY01000003.1| 6431 6359 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.65929.rna.11 RNA gi|480756730|gb|AQUY01000003.1| 6526 6453 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.65929.rna.12 RNA gi|480756730|gb|AQUY01000003.1| 6848 6775 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.65929.rna.13 RNA gi|480756730|gb|AQUY01000003.1| 6922 6850 -1 - 73 tRNA-Glu-TTC - none -
fig|6666666.65929.rna.14 RNA gi|480756730|gb|AQUY01000003.1| 13229 13157 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.65929.rna.15 RNA gi|480756730|gb|AQUY01000003.1| 63561 63489 -3 - 73 tRNA-Thr-TGT - none -
fig|6666666.65929.rna.16 RNA gi|480756730|gb|AQUY01000003.1| 200070 200140 3 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.65929.rna.17 RNA gi|480756730|gb|AQUY01000003.1| 293693 293573 -2 - 121 5S RNA - none -
fig|6666666.65929.rna.18 RNA gi|480756736|gb|AQUY01000002.1| 33 153 3 + 121 5S RNA - none -
fig|6666666.65929.rna.19 RNA gi|480756736|gb|AQUY01000002.1| 52816 52744 -1 - 73 tRNA-Arg-CCT - none -
fig|6666666.65929.rna.20 RNA gi|480756736|gb|AQUY01000002.1| 152321 152393 2 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.65929.rna.21 RNA gi|480756736|gb|AQUY01000002.1| 220973 221054 2 + 82 tRNA-Leu-TAG - none -
fig|6666666.65929.rna.22 RNA gi|480756736|gb|AQUY01000002.1| 225610 225538 -1 - 73 tRNA-Lys-CTT - none -
fig|6666666.65929.rna.23 RNA gi|480756736|gb|AQUY01000002.1| 240306 240234 -3 - 73 tRNA-His-GTG - none -
fig|6666666.65929.rna.24 RNA gi|480756736|gb|AQUY01000002.1| 247677 247604 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.65929.rna.25 RNA gi|480756736|gb|AQUY01000002.1| 268508 268437 -2 - 72 tRNA-Gly-TCC - none -
fig|6666666.65929.rna.26 RNA gi|480756736|gb|AQUY01000002.1| 268827 268900 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.65929.rna.27 RNA gi|480756736|gb|AQUY01000002.1| 346560 346631 3 + 72 tRNA-Asn-GTT - none -
fig|6666666.65929.rna.28 RNA gi|480756736|gb|AQUY01000002.1| 351744 351817 3 + 74 tRNA-Met-CAT - none -
fig|6666666.65929.rna.29 RNA gi|480756736|gb|AQUY01000002.1| 360866 360937 2 + 72 tRNA-Val-TAC - none -
fig|6666666.65929.rna.30 RNA gi|480756736|gb|AQUY01000002.1| 606686 606613 -2 - 74 tRNA-Leu-CAA tRNAs
fig|6666666.65929.rna.31 RNA gi|480756742|gb|AQUY01000001.1| 7795 7710 -1 - 86 tRNA-Ser-GGA tRNAs
fig|6666666.65929.rna.32 RNA gi|480756742|gb|AQUY01000001.1| 60856 60928 1 + 73 tRNA-Thr-CGT - none -
fig|6666666.65929.rna.33 RNA gi|480756742|gb|AQUY01000001.1| 157209 157290 3 + 82 tRNA-Tyr-GTA - none -
fig|6666666.65929.rna.34 RNA gi|480756742|gb|AQUY01000001.1| 158624 158696 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.65929.rna.35 RNA gi|480756742|gb|AQUY01000001.1| 158755 158828 1 + 74 tRNA-Met-CAT - none -
fig|6666666.65929.rna.36 RNA gi|480756742|gb|AQUY01000001.1| 158972 159044 2 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.65929.rna.37 RNA gi|480756742|gb|AQUY01000001.1| 432829 432902 1 + 74 tRNA-Met-CAT - none -
fig|6666666.65929.rna.38 RNA gi|480756742|gb|AQUY01000001.1| 464800 464730 -1 - 71 tRNA-Gln-TTG - none -
fig|6666666.65929.rna.39 RNA gi|480756742|gb|AQUY01000001.1| 473892 473965 3 + 74 tRNA-Leu-TAA - none -
fig|6666666.65929.rna.40 RNA gi|480756742|gb|AQUY01000001.1| 604572 604500 -3 - 73 tRNA-Arg-CCG tRNAs
fig|6666666.65929.rna.41 RNA gi|480756742|gb|AQUY01000001.1| 686851 686922 1 + 72 tRNA-Gln-CTG - none -
fig|6666666.65929.rna.42 RNA gi|480756742|gb|AQUY01000001.1| 686974 687046 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.65929.rna.43 RNA gi|480756742|gb|AQUY01000001.1| 891656 891584 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65929.rna.44 RNA gi|480756742|gb|AQUY01000001.1| 891763 891692 -1 - 72 tRNA-Val-GAC tRNAs
fig|6666666.65929.rna.45 RNA gi|480756742|gb|AQUY01000001.1| 891853 891783 -1 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.65929.rna.46 RNA gi|480756742|gb|AQUY01000001.1| 891991 891919 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.65929.rna.47 RNA gi|480756742|gb|AQUY01000001.1| 892366 892437 1 + 72 tRNA-Val-CAC tRNAs
fig|6666666.65929.rna.48 RNA gi|480756742|gb|AQUY01000001.1| 1025857 1025772 -1 - 86 tRNA-Leu-GAG tRNAs
fig|6666666.65929.rna.49 RNA gi|480756742|gb|AQUY01000001.1| 1104233 1104161 -2 - 73 tRNA-Arg-CCT - none -
fig|6666666.65929.rna.50 RNA gi|480756742|gb|AQUY01000001.1| 1158468 1158348 -3 - 121 5S RNA - none -