fig|6666666.67444.peg.1 CDS gi|387981555|gb|AJVH01000033.1| 34 1413 1 + 1380 Mobile element protein - none -
fig|6666666.67444.peg.2 CDS gi|387981558|gb|AJVH01000032.1| 417 124 -3 - 294 hypothetical protein - none -
fig|6666666.67444.peg.3 CDS gi|387981558|gb|AJVH01000032.1| 591 1142 3 + 552 hypothetical protein - none -
fig|6666666.67444.peg.4 CDS gi|387981558|gb|AJVH01000032.1| 1452 1565 3 + 114 hypothetical protein - none -
fig|6666666.67444.peg.5 CDS gi|387981558|gb|AJVH01000032.1| 1566 1679 3 + 114 hypothetical protein - none -
fig|6666666.67444.peg.6 CDS gi|387981563|gb|AJVH01000031.1| 71 223 2 + 153 hypothetical protein - none -
fig|6666666.67444.peg.7 CDS gi|387981563|gb|AJVH01000031.1| 1841 2065 2 + 225 hypothetical protein - none -
fig|6666666.67444.peg.9 CDS gi|387981566|gb|AJVH01000030.1| 571 1071 1 + 501 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.67444.peg.10 CDS gi|387981566|gb|AJVH01000030.1| 1203 1997 3 + 795 hypothetical protein - none -
fig|6666666.67444.peg.11 CDS gi|387981566|gb|AJVH01000030.1| 3424 1994 -1 - 1431 putative ATP /GTP binding protein - none -
fig|6666666.67444.peg.12 CDS gi|387981566|gb|AJVH01000030.1| 3592 3425 -1 - 168 Putative membrane protein - none -
fig|6666666.67444.peg.13 CDS gi|387981566|gb|AJVH01000030.1| 5097 3808 -3 - 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67444.peg.14 CDS gi|387981566|gb|AJVH01000030.1| 5192 5317 2 + 126 Putative beta-ketoacyl-ACP synthase gene remnant - none -
fig|6666666.67444.peg.15 CDS gi|387981566|gb|AJVH01000030.1| 6011 5295 -2 - 717 hypothetical protein - none -
fig|6666666.67444.peg.16 CDS gi|387981566|gb|AJVH01000030.1| 6465 7400 3 + 936 3-carboxyethylcatechol 2,3-dioxygenase (EC 1.13.11.16) Aromatic dioxygenase mess;
Dioxygenases (EC 1.13.11.-)
fig|6666666.67444.peg.17 CDS gi|387981566|gb|AJVH01000030.1| 7521 8294 3 + 774 4-oxalocrotonate decarboxylase (EC 4.1.1.77) - none -
fig|6666666.67444.peg.18 CDS gi|387981566|gb|AJVH01000030.1| 8305 9228 1 + 924 Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol - none -
fig|6666666.67444.peg.19 CDS gi|387981566|gb|AJVH01000030.1| 9242 10255 2 + 1014 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-) - none -
fig|6666666.67444.peg.20 CDS gi|387981566|gb|AJVH01000030.1| 11041 10256 -1 - 786 Transcriptional regulator, IclR family - none -
fig|6666666.67444.peg.21 CDS gi|387981566|gb|AJVH01000030.1| 11119 11997 1 + 879 hypothetical protein - none -
fig|6666666.67444.peg.22 CDS gi|387981566|gb|AJVH01000030.1| 12306 13646 3 + 1341 Large subunit naph/bph dioxygenase - none -
fig|6666666.67444.peg.23 CDS gi|387981566|gb|AJVH01000030.1| 13679 14023 2 + 345 3-phenylpropionate dioxygenase ferredoxin subunit Aromatic dioxygenase mess;
Dioxygenases (EC 1.14.12.-);
Phenylpropionate Degradation
fig|6666666.67444.peg.24 CDS gi|387981566|gb|AJVH01000030.1| 14036 15244 2 + 1209 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.67444.peg.25 CDS gi|387981566|gb|AJVH01000030.1| 15250 15810 1 + 561 Biphenyl dioxygenase subunit beta (EC 1.14.12.18) (Biphenyl 2,3-dioxygenase) - none -
fig|6666666.67444.peg.26 CDS gi|387981566|gb|AJVH01000030.1| 15824 16642 2 + 819 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-) Phenylpropionate Degradation
fig|6666666.67444.peg.27 CDS gi|387981566|gb|AJVH01000030.1| 16639 18252 1 + 1614 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.28 CDS gi|387981566|gb|AJVH01000030.1| 18312 18569 3 + 258 hypothetical protein - none -
fig|6666666.67444.peg.29 CDS gi|387981566|gb|AJVH01000030.1| 18674 18988 2 + 315 hypothetical protein - none -
fig|6666666.67444.peg.30 CDS gi|387981566|gb|AJVH01000030.1| 19014 19850 3 + 837 FIG00545467: hypothetical protein - none -
fig|6666666.67444.peg.31 CDS gi|387981566|gb|AJVH01000030.1| 20974 19847 -1 - 1128 FIG00549618: hypothetical protein - none -
fig|6666666.67444.peg.32 CDS gi|387981566|gb|AJVH01000030.1| 21087 22208 3 + 1122 Putative secreted protein - none -
fig|6666666.67444.peg.33 CDS gi|387981566|gb|AJVH01000030.1| 23454 22300 -3 - 1155 FIG00549127: hypothetical protein - none -
fig|6666666.67444.peg.34 CDS gi|387981566|gb|AJVH01000030.1| 23711 23595 -2 - 117 hypothetical protein - none -
fig|6666666.67444.peg.35 CDS gi|387981592|gb|AJVH01000029.1| 981 19 -3 - 963 Putative integral membrane protein - none -
fig|6666666.67444.peg.36 CDS gi|387981592|gb|AJVH01000029.1| 1261 1034 -1 - 228 Putative ABC transport system, ATP-binding subunit - none -
fig|6666666.67444.peg.37 CDS gi|387981592|gb|AJVH01000029.1| 1904 1263 -2 - 642 putative ABC transport system, ATP-binding protein - none -
fig|6666666.67444.peg.38 CDS gi|387981592|gb|AJVH01000029.1| 2275 1901 -1 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.67444.peg.39 CDS gi|387981592|gb|AJVH01000029.1| 2516 3871 2 + 1356 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67444.peg.40 CDS gi|387981592|gb|AJVH01000029.1| 4708 3944 -1 - 765 FIG00544174: hypothetical protein - none -
fig|6666666.67444.peg.41 CDS gi|387981592|gb|AJVH01000029.1| 4846 4724 -1 - 123 hypothetical protein - none -
fig|6666666.67444.peg.42 CDS gi|387981592|gb|AJVH01000029.1| 5262 4879 -3 - 384 Thioredoxin - none -
fig|6666666.67444.peg.43 CDS gi|387981592|gb|AJVH01000029.1| 5470 5679 1 + 210 Copper chaperone Copper homeostasis
fig|6666666.67444.peg.44 CDS gi|387981592|gb|AJVH01000029.1| 5835 8066 3 + 2232 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67444.peg.45 CDS gi|387981592|gb|AJVH01000029.1| 8165 9490 2 + 1326 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67444.peg.46 CDS gi|387981592|gb|AJVH01000029.1| 11014 9494 -1 - 1521 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67444.peg.47 CDS gi|387981592|gb|AJVH01000029.1| 12040 11588 -1 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67444.peg.48 CDS gi|387981592|gb|AJVH01000029.1| 12752 12171 -2 - 582 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67444.peg.49 CDS gi|387981592|gb|AJVH01000029.1| 13164 12877 -3 - 288 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.67444.peg.50 CDS gi|387981592|gb|AJVH01000029.1| 13538 13359 -2 - 180 FIG00544411: hypothetical protein - none -
fig|6666666.67444.peg.51 CDS gi|387981592|gb|AJVH01000029.1| 14941 13538 -1 - 1404 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67444.peg.52 CDS gi|387981592|gb|AJVH01000029.1| 17334 15154 -3 - 2181 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67444.peg.53 CDS gi|387981592|gb|AJVH01000029.1| 17733 17422 -3 - 312 FIG00544267: hypothetical protein - none -
fig|6666666.67444.peg.54 CDS gi|387981592|gb|AJVH01000029.1| 17901 18353 3 + 453 Transcriptional regulator, MarR family - none -
fig|6666666.67444.peg.55 CDS gi|387981592|gb|AJVH01000029.1| 18363 19328 3 + 966 Universal stress protein family - none -
fig|6666666.67444.peg.56 CDS gi|387981592|gb|AJVH01000029.1| 19340 20011 2 + 672 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67444.peg.57 CDS gi|387981592|gb|AJVH01000029.1| 20023 20496 1 + 474 hypothetical membrane protein - none -
fig|6666666.67444.peg.58 CDS gi|387981592|gb|AJVH01000029.1| 22008 20563 -3 - 1446 Putative DNA-binding protein - none -
fig|6666666.67444.peg.59 CDS gi|387981592|gb|AJVH01000029.1| 23044 22166 -1 - 879 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67444.peg.60 CDS gi|387981592|gb|AJVH01000029.1| 23284 23559 1 + 276 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67444.peg.61 CDS gi|387981592|gb|AJVH01000029.1| 23639 23923 2 + 285 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67444.peg.62 CDS gi|387981592|gb|AJVH01000029.1| 24544 24059 -1 - 486 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.67444.peg.63 CDS gi|387981592|gb|AJVH01000029.1| 24589 25485 1 + 897 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67444.peg.64 CDS gi|387981592|gb|AJVH01000029.1| 25507 27015 1 + 1509 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67444.peg.65 CDS gi|387981592|gb|AJVH01000029.1| 28128 27028 -3 - 1101 Putative hydrolase - none -
fig|6666666.67444.peg.66 CDS gi|387981592|gb|AJVH01000029.1| 28725 28243 -3 - 483 Conserved integral membrane protein - none -
fig|6666666.67444.peg.67 CDS gi|387981592|gb|AJVH01000029.1| 28781 29008 2 + 228 hypothetical protein - none -
fig|6666666.67444.peg.68 CDS gi|387981592|gb|AJVH01000029.1| 30107 29046 -2 - 1062 phage-related regulatory protein cII - none -
fig|6666666.67444.peg.69 CDS gi|387981592|gb|AJVH01000029.1| 32109 30442 -3 - 1668 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.67444.peg.70 CDS gi|387981592|gb|AJVH01000029.1| 33988 32282 -1 - 1707 hypothetical protein - none -
fig|6666666.67444.peg.71 CDS gi|387981592|gb|AJVH01000029.1| 37289 34089 -2 - 3201 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67444.peg.72 CDS gi|387981592|gb|AJVH01000029.1| 38073 37282 -3 - 792 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67444.peg.73 CDS gi|387981592|gb|AJVH01000029.1| 39249 38518 -3 - 732 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67444.peg.74 CDS gi|387981592|gb|AJVH01000029.1| 41014 39446 -1 - 1569 Phage integrase (Site-specific recombinase) - none -
fig|6666666.67444.peg.75 CDS gi|387981592|gb|AJVH01000029.1| 41241 41014 -3 - 228 hypothetical protein - none -
fig|6666666.67444.peg.76 CDS gi|387981592|gb|AJVH01000029.1| 41505 42638 3 + 1134 hypothetical protein - none -
fig|6666666.67444.peg.77 CDS gi|387981592|gb|AJVH01000029.1| 42635 42862 2 + 228 hypothetical protein - none -
fig|6666666.67444.peg.78 CDS gi|387981592|gb|AJVH01000029.1| 42906 44585 3 + 1680 hypothetical protein - none -
fig|6666666.67444.peg.79 CDS gi|387981592|gb|AJVH01000029.1| 44582 44794 2 + 213 Transcriptional regulator, ArsR family - none -
fig|6666666.67444.peg.80 CDS gi|387981592|gb|AJVH01000029.1| 44791 46683 1 + 1893 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.67444.peg.81 CDS gi|387981592|gb|AJVH01000029.1| 46688 49657 2 + 2970 Type III restriction-modification system StyLTI enzyme res (EC 3.1.21.5) Restriction-Modification System
fig|6666666.67444.peg.82 CDS gi|387981592|gb|AJVH01000029.1| 49654 51285 1 + 1632 FIG131328: Predicted ATP-dependent endonuclease of the OLD family - none -
fig|6666666.67444.peg.83 CDS gi|387981592|gb|AJVH01000029.1| 51282 52421 3 + 1140 hypothetical protein - none -
fig|6666666.67444.peg.84 CDS gi|387981592|gb|AJVH01000029.1| 53441 52569 -2 - 873 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67444.peg.85 CDS gi|387981592|gb|AJVH01000029.1| 54822 53491 -3 - 1332 hypothetical protein - none -
fig|6666666.67444.peg.86 CDS gi|387981592|gb|AJVH01000029.1| 56327 55029 -2 - 1299 Conserved hypothetical DNA-binding protein - none -
fig|6666666.67444.peg.87 CDS gi|387981592|gb|AJVH01000029.1| 58233 56533 -3 - 1701 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.67444.peg.88 CDS gi|387981592|gb|AJVH01000029.1| 58976 58323 -2 - 654 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67444.peg.89 CDS gi|387981592|gb|AJVH01000029.1| 59486 59256 -2 - 231 hypothetical protein - none -
fig|6666666.67444.peg.90 CDS gi|387981592|gb|AJVH01000029.1| 62406 59668 -3 - 2739 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67444.peg.91 CDS gi|387981592|gb|AJVH01000029.1| 62543 62394 -2 - 150 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67444.peg.92 CDS gi|387981592|gb|AJVH01000029.1| 62603 62749 2 + 147 hypothetical protein - none -
fig|6666666.67444.peg.93 CDS gi|387981592|gb|AJVH01000029.1| 63043 62831 -1 - 213 No significant database matches - none -
fig|6666666.67444.peg.94 CDS gi|387981592|gb|AJVH01000029.1| 63794 63129 -2 - 666 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.67444.peg.95 CDS gi|387981592|gb|AJVH01000029.1| 64825 63791 -1 - 1035 FIG00545752: hypothetical protein - none -
fig|6666666.67444.peg.96 CDS gi|387981592|gb|AJVH01000029.1| 67618 64961 -1 - 2658 hypothetical protein - none -
fig|6666666.67444.peg.97 CDS gi|387981592|gb|AJVH01000029.1| 67710 68963 3 + 1254 two-component system histidine kinase ChrS - none -
fig|6666666.67444.peg.98 CDS gi|387981592|gb|AJVH01000029.1| 68960 69559 2 + 600 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.99 CDS gi|387981592|gb|AJVH01000029.1| 70101 69556 -3 - 546 Conserved integral membrane protein - none -
fig|6666666.67444.peg.100 CDS gi|387981592|gb|AJVH01000029.1| 72099 70198 -3 - 1902 Conserved integral membrane protein - none -
fig|6666666.67444.peg.101 CDS gi|387981592|gb|AJVH01000029.1| 72470 73528 2 + 1059 Putative membrane protein - none -
fig|6666666.67444.peg.102 CDS gi|387981592|gb|AJVH01000029.1| 73717 75108 1 + 1392 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67444.peg.103 CDS gi|387981592|gb|AJVH01000029.1| 75276 76070 3 + 795 Putative phosphotransferase system protein - none -
fig|6666666.67444.peg.104 CDS gi|387981592|gb|AJVH01000029.1| 76096 77667 1 + 1572 Putative integral membrane protein - none -
fig|6666666.67444.peg.105 CDS gi|387981592|gb|AJVH01000029.1| 77835 77701 -3 - 135 hypothetical protein - none -
fig|6666666.67444.peg.106 CDS gi|387981592|gb|AJVH01000029.1| 78848 77892 -2 - 957 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67444.peg.107 CDS gi|387981592|gb|AJVH01000029.1| 78996 79133 3 + 138 hypothetical protein - none -
fig|6666666.67444.peg.108 CDS gi|387981592|gb|AJVH01000029.1| 79148 80143 2 + 996 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.109 CDS gi|387981592|gb|AJVH01000029.1| 80239 80997 1 + 759 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.110 CDS gi|387981592|gb|AJVH01000029.1| 81003 81695 3 + 693 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.67444.peg.111 CDS gi|387981592|gb|AJVH01000029.1| 81714 82880 3 + 1167 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.67444.peg.112 CDS gi|387981592|gb|AJVH01000029.1| 83598 82891 -3 - 708 hypothetical protein - none -
fig|6666666.67444.peg.113 CDS gi|387981592|gb|AJVH01000029.1| 83721 84359 3 + 639 hypothetical protein - none -
fig|6666666.67444.peg.114 CDS gi|387981592|gb|AJVH01000029.1| 85860 84367 -3 - 1494 ATP-dependent Zn protease - none -
fig|6666666.67444.peg.115 CDS gi|387981592|gb|AJVH01000029.1| 86808 85924 -3 - 885 hypothetical protein - none -
fig|6666666.67444.peg.116 CDS gi|387981592|gb|AJVH01000029.1| 88222 86978 -1 - 1245 putative transmembrane symporter - none -
fig|6666666.67444.peg.117 CDS gi|387981592|gb|AJVH01000029.1| 88421 88882 2 + 462 Putative integral membrane protein - none -
fig|6666666.67444.peg.118 CDS gi|387981592|gb|AJVH01000029.1| 89136 89002 -3 - 135 hypothetical protein - none -
fig|6666666.67444.peg.119 CDS gi|387981592|gb|AJVH01000029.1| 89135 90466 2 + 1332 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.120 CDS gi|387981592|gb|AJVH01000029.1| 90469 91620 1 + 1152 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.121 CDS gi|387981592|gb|AJVH01000029.1| 91660 92022 1 + 363 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.122 CDS gi|387981592|gb|AJVH01000029.1| 92022 92666 3 + 645 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.123 CDS gi|387981592|gb|AJVH01000029.1| 92681 93706 2 + 1026 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.124 CDS gi|387981592|gb|AJVH01000029.1| 93696 95153 3 + 1458 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67444.peg.125 CDS gi|387981592|gb|AJVH01000029.1| 95372 95205 -2 - 168 hypothetical protein - none -
fig|6666666.67444.peg.126 CDS gi|387981592|gb|AJVH01000029.1| 95415 95591 3 + 177 FIG039061: hypothetical protein related to heme utilization Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.127 CDS gi|387981592|gb|AJVH01000029.1| 95588 96448 2 + 861 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67444.peg.128 CDS gi|387981592|gb|AJVH01000029.1| 97236 96445 -3 - 792 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.67444.peg.129 CDS gi|387981592|gb|AJVH01000029.1| 97393 97280 -1 - 114 hypothetical protein - none -
fig|6666666.67444.peg.130 CDS gi|387981592|gb|AJVH01000029.1| 97573 98799 1 + 1227 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.131 CDS gi|387981592|gb|AJVH01000029.1| 98805 99641 3 + 837 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.132 CDS gi|387981592|gb|AJVH01000029.1| 99681 100058 3 + 378 Putative iron-sulphur protein - none -
fig|6666666.67444.peg.133 CDS gi|387981592|gb|AJVH01000029.1| 100079 101047 2 + 969 Sodium - Bile acid symporter CBSS-349102.4.peg.3442
fig|6666666.67444.peg.134 CDS gi|387981592|gb|AJVH01000029.1| 101044 101370 1 + 327 No significant database matches - none -
fig|6666666.67444.peg.135 CDS gi|387981592|gb|AJVH01000029.1| 101826 101461 -3 - 366 hypothetical membrane protein - none -
fig|6666666.67444.peg.136 CDS gi|387981592|gb|AJVH01000029.1| 102566 101835 -2 - 732 Branched-chain amino acid transport protein azlC - none -
fig|6666666.67444.peg.137 CDS gi|387981592|gb|AJVH01000029.1| 103163 102567 -2 - 597 Putative transcriptional regulator - none -
fig|6666666.67444.peg.138 CDS gi|387981592|gb|AJVH01000029.1| 104651 103164 -2 - 1488 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67444.peg.139 CDS gi|387981592|gb|AJVH01000029.1| 104791 105663 1 + 873 MutT/nudix family protein - none -
fig|6666666.67444.peg.140 CDS gi|387981592|gb|AJVH01000029.1| 105660 108374 3 + 2715 probable secreted protein. - none -
fig|6666666.67444.peg.141 CDS gi|387981592|gb|AJVH01000029.1| 108483 111785 3 + 3303 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67444.peg.142 CDS gi|387981592|gb|AJVH01000029.1| 111944 112546 2 + 603 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.67444.peg.143 CDS gi|387981592|gb|AJVH01000029.1| 112682 113626 2 + 945 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.67444.peg.144 CDS gi|387981592|gb|AJVH01000029.1| 113641 113964 1 + 324 Thioredoxin - none -
fig|6666666.67444.peg.145 CDS gi|387981592|gb|AJVH01000029.1| 114012 115193 3 + 1182 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.67444.peg.146 CDS gi|387981592|gb|AJVH01000029.1| 116364 115261 -3 - 1104 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67444.peg.147 CDS gi|387981592|gb|AJVH01000029.1| 117387 116371 -3 - 1017 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67444.peg.148 CDS gi|387981592|gb|AJVH01000029.1| 118145 117510 -2 - 636 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67444.peg.149 CDS gi|387981592|gb|AJVH01000029.1| 119257 118304 -1 - 954 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.67444.peg.150 CDS gi|387981592|gb|AJVH01000029.1| 119909 119550 -2 - 360 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.67444.peg.151 CDS gi|387981592|gb|AJVH01000029.1| 120084 119941 -3 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67444.peg.152 CDS gi|387981592|gb|AJVH01000029.1| 121009 122685 1 + 1677 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67444.peg.153 CDS gi|387981592|gb|AJVH01000029.1| 123324 124511 3 + 1188 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67444.peg.154 CDS gi|387981592|gb|AJVH01000029.1| 124550 125743 2 + 1194 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67444.peg.155 CDS gi|387981592|gb|AJVH01000029.1| 125733 126284 3 + 552 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67444.peg.156 CDS gi|387981592|gb|AJVH01000029.1| 126399 128444 3 + 2046 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67444.peg.157 CDS gi|387981592|gb|AJVH01000029.1| 128937 128500 -3 - 438 FIG00544172: hypothetical protein - none -
fig|6666666.67444.peg.158 CDS gi|387981592|gb|AJVH01000029.1| 129472 129200 -1 - 273 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67444.peg.159 CDS gi|387981592|gb|AJVH01000029.1| 129680 129477 -2 - 204 Prevent host death protein, Phd antitoxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67444.peg.160 CDS gi|387981592|gb|AJVH01000029.1| 129791 132361 2 + 2571 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67444.peg.161 CDS gi|387981592|gb|AJVH01000029.1| 132361 132705 1 + 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67444.peg.162 CDS gi|387981592|gb|AJVH01000029.1| 132978 133187 3 + 210 hypothetical protein - none -
fig|6666666.67444.peg.163 CDS gi|387981592|gb|AJVH01000029.1| 133896 133174 -3 - 723 Lactate-responsive regulator LldR in Actinobacteria, GntR family Lactate utilization
fig|6666666.67444.peg.164 CDS gi|387981592|gb|AJVH01000029.1| 135650 133980 -2 - 1671 L-lactate permease Lactate utilization
fig|6666666.67444.peg.165 CDS gi|387981592|gb|AJVH01000029.1| 135790 135906 1 + 117 hypothetical protein - none -
fig|6666666.67444.peg.166 CDS gi|387981592|gb|AJVH01000029.1| 136080 136619 3 + 540 No significant database matches - none -
fig|6666666.67444.peg.167 CDS gi|387981592|gb|AJVH01000029.1| 136765 138351 1 + 1587 hypothetical protein - none -
fig|6666666.67444.peg.168 CDS gi|387981592|gb|AJVH01000029.1| 138341 139987 2 + 1647 putative ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.169 CDS gi|387981592|gb|AJVH01000029.1| 140428 140544 1 + 117 hypothetical protein - none -
fig|6666666.67444.peg.170 CDS gi|387981592|gb|AJVH01000029.1| 141087 140689 -3 - 399 hypothetical protein - none -
fig|6666666.67444.peg.171 CDS gi|387981592|gb|AJVH01000029.1| 141503 141790 2 + 288 hypothetical protein - none -
fig|6666666.67444.peg.172 CDS gi|387981592|gb|AJVH01000029.1| 142103 141924 -2 - 180 Doubtful CDS. No strong consensus RBS usptream. No significant database matches - none -
fig|6666666.67444.peg.173 CDS gi|387981592|gb|AJVH01000029.1| 142343 142221 -2 - 123 hypothetical protein - none -
fig|6666666.67444.peg.174 CDS gi|387981592|gb|AJVH01000029.1| 142479 143348 3 + 870 Inositol transport system sugar-binding protein - none -
fig|6666666.67444.peg.175 CDS gi|387981592|gb|AJVH01000029.1| 143345 144376 2 + 1032 Probable ABC transport protein, membrane component - none -
fig|6666666.67444.peg.176 CDS gi|387981592|gb|AJVH01000029.1| 144377 145138 2 + 762 putative sugar ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.177 CDS gi|387981592|gb|AJVH01000029.1| 145794 145186 -3 - 609 FIG00545776: hypothetical protein - none -
fig|6666666.67444.peg.178 CDS gi|387981592|gb|AJVH01000029.1| 145857 146399 3 + 543 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.179 CDS gi|387981592|gb|AJVH01000029.1| 146714 146451 -2 - 264 Putative transposase (partial) - none -
fig|6666666.67444.peg.180 CDS gi|387981592|gb|AJVH01000029.1| 146850 147464 3 + 615 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.67444.peg.181 CDS gi|387981592|gb|AJVH01000029.1| 148540 150339 1 + 1800 Thiamin biosynthesis protein ThiC Thiamin biosynthesis
fig|6666666.67444.peg.182 CDS gi|387981592|gb|AJVH01000029.1| 150392 150991 2 + 600 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67444.peg.183 CDS gi|387981592|gb|AJVH01000029.1| 150988 152076 1 + 1089 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.67444.peg.184 CDS gi|387981592|gb|AJVH01000029.1| 152060 152260 2 + 201 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.67444.peg.185 CDS gi|387981592|gb|AJVH01000029.1| 152262 153047 3 + 786 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67444.peg.186 CDS gi|387981592|gb|AJVH01000029.1| 153047 154057 2 + 1011 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67444.peg.187 CDS gi|387981592|gb|AJVH01000029.1| 154054 154956 1 + 903 Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
5-FCL-like protein;
Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.67444.peg.188 CDS gi|387981592|gb|AJVH01000029.1| 155055 154924 -3 - 132 hypothetical protein - none -
fig|6666666.67444.peg.189 CDS gi|387981592|gb|AJVH01000029.1| 155451 158705 3 + 3255 CRISPR-associated protein, Csn1 family CRISPRs
fig|6666666.67444.peg.190 CDS gi|387981592|gb|AJVH01000029.1| 158709 159623 3 + 915 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.67444.peg.191 CDS gi|387981592|gb|AJVH01000029.1| 159607 159936 1 + 330 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.67444.peg.192 CDS gi|387981592|gb|AJVH01000029.1| 161276 161163 -2 - 114 hypothetical protein - none -
fig|6666666.67444.peg.193 CDS gi|387981592|gb|AJVH01000029.1| 161254 161457 1 + 204 Mobile element protein - none -
fig|6666666.67444.peg.194 CDS gi|387981592|gb|AJVH01000029.1| 161790 162125 3 + 336 Mobile element protein - none -
fig|6666666.67444.peg.195 CDS gi|387981740|gb|AJVH01000028.1| 189 3905 3 + 3717 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67444.peg.196 CDS gi|387981740|gb|AJVH01000028.1| 4575 3985 -3 - 591 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67444.peg.197 CDS gi|387981740|gb|AJVH01000028.1| 4703 5191 2 + 489 Putative oxidoreductase - none -
fig|6666666.67444.peg.198 CDS gi|387981740|gb|AJVH01000028.1| 5265 7769 3 + 2505 Fe-S oxidoreductase - none -
fig|6666666.67444.peg.199 CDS gi|387981740|gb|AJVH01000028.1| 7814 8464 2 + 651 hypothetical protein - none -
fig|6666666.67444.peg.200 CDS gi|387981740|gb|AJVH01000028.1| 9647 8556 -2 - 1092 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4) Acetoin, butanediol metabolism
fig|6666666.67444.peg.201 CDS gi|387981740|gb|AJVH01000028.1| 10040 9864 -2 - 177 hypothetical protein - none -
fig|6666666.67444.peg.202 CDS gi|387981740|gb|AJVH01000028.1| 10023 11159 3 + 1137 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67444.peg.203 CDS gi|387981740|gb|AJVH01000028.1| 11314 12471 1 + 1158 FIG00547263: hypothetical protein - none -
fig|6666666.67444.peg.204 CDS gi|387981740|gb|AJVH01000028.1| 12557 15646 2 + 3090 Putative membrane protein found fused to lysyl-tRNA synthetase like protein / Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein tRNA aminoacylation, Lys;
tRNA aminoacylation, Lys
fig|6666666.67444.peg.205 CDS gi|387981740|gb|AJVH01000028.1| 16430 15753 -2 - 678 No significant database matches - none -
fig|6666666.67444.peg.206 CDS gi|387981740|gb|AJVH01000028.1| 17013 16393 -3 - 621 Putative integral membrane protein - none -
fig|6666666.67444.peg.207 CDS gi|387981740|gb|AJVH01000028.1| 18243 17038 -3 - 1206 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67444.peg.208 CDS gi|387981740|gb|AJVH01000028.1| 18812 18249 -2 - 564 Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming) - none -
fig|6666666.67444.peg.209 CDS gi|387981740|gb|AJVH01000028.1| 19165 18989 -1 - 177 hypothetical protein - none -
fig|6666666.67444.peg.210 CDS gi|387981740|gb|AJVH01000028.1| 19595 19434 -2 - 162 FIG00818530: hypothetical protein - none -
fig|6666666.67444.peg.211 CDS gi|387981740|gb|AJVH01000028.1| 20307 20474 3 + 168 hypothetical protein - none -
fig|6666666.67444.peg.212 CDS gi|387981740|gb|AJVH01000028.1| 20749 20471 -1 - 279 Phage antirepressor protein - none -
fig|6666666.67444.peg.213 CDS gi|387981740|gb|AJVH01000028.1| 21009 21995 3 + 987 Abortive infection bacteriophage resistance protein - none -
fig|6666666.67444.peg.214 CDS gi|387981740|gb|AJVH01000028.1| 22576 21992 -1 - 585 DNA polymerase, phage-associated - none -
fig|6666666.67444.peg.215 CDS gi|387981740|gb|AJVH01000028.1| 22722 23033 3 + 312 amidohydrolase 2 - none -
fig|6666666.67444.peg.216 CDS gi|387981740|gb|AJVH01000028.1| 24834 23080 -3 - 1755 ABC-type multidrug transport system, ATPase and permease components - none -
fig|6666666.67444.peg.217 CDS gi|387981740|gb|AJVH01000028.1| 26618 24837 -2 - 1782 ABC transporter, transmembrane region - none -
fig|6666666.67444.peg.218 CDS gi|387981740|gb|AJVH01000028.1| 34575 26671 -3 - 7905 hypothetical protein - none -
fig|6666666.67444.peg.219 CDS gi|387981740|gb|AJVH01000028.1| 39752 34572 -2 - 5181 Siderophore biosynthesis non-ribosomal peptide synthetase modules - none -
fig|6666666.67444.peg.220 CDS gi|387981740|gb|AJVH01000028.1| 40140 41639 3 + 1500 hypothetical protein - none -
fig|6666666.67444.peg.221 CDS gi|387981740|gb|AJVH01000028.1| 41652 42605 3 + 954 Peptide ABC transporter, permease protein - none -
fig|6666666.67444.peg.222 CDS gi|387981740|gb|AJVH01000028.1| 42602 43423 2 + 822 Dipeptide transport system permease protein dppC - none -
fig|6666666.67444.peg.223 CDS gi|387981740|gb|AJVH01000028.1| 43420 44826 1 + 1407 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67444.peg.224 CDS gi|387981740|gb|AJVH01000028.1| 44953 46239 1 + 1287 Putative ABC transport system permease protein - none -
fig|6666666.67444.peg.225 CDS gi|387981740|gb|AJVH01000028.1| 46336 46539 1 + 204 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67444.peg.226 CDS gi|387981740|gb|AJVH01000028.1| 46568 47779 2 + 1212 membrane transport protein - none -
fig|6666666.67444.peg.227 CDS gi|387981740|gb|AJVH01000028.1| 49224 47776 -3 - 1449 hypothetical protein - none -
fig|6666666.67444.peg.228 CDS gi|387981740|gb|AJVH01000028.1| 50048 49257 -2 - 792 membrane protein, putative - none -
fig|6666666.67444.peg.229 CDS gi|387981740|gb|AJVH01000028.1| 51741 50071 -3 - 1671 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67444.peg.230 CDS gi|387981740|gb|AJVH01000028.1| 52922 51759 -2 - 1164 Putative secreted glycosyl hydrolase - none -
fig|6666666.67444.peg.231 CDS gi|387981740|gb|AJVH01000028.1| 52957 53145 1 + 189 FIG00543976: hypothetical protein - none -
fig|6666666.67444.peg.232 CDS gi|387981740|gb|AJVH01000028.1| 53146 56223 1 + 3078 Conserved putative integral membrane protein - none -
fig|6666666.67444.peg.233 CDS gi|387981740|gb|AJVH01000028.1| 57258 56404 -3 - 855 hypothetical protein - none -
fig|6666666.67444.peg.234 CDS gi|387981740|gb|AJVH01000028.1| 57267 58361 3 + 1095 FIG00547617: hypothetical protein - none -
fig|6666666.67444.peg.235 CDS gi|387981740|gb|AJVH01000028.1| 58352 59764 2 + 1413 FIG00547077: hypothetical protein - none -
fig|6666666.67444.peg.236 CDS gi|387981740|gb|AJVH01000028.1| 60843 61577 3 + 735 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67444.peg.237 CDS gi|387981740|gb|AJVH01000028.1| 63440 61602 -2 - 1839 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67444.peg.238 CDS gi|387981740|gb|AJVH01000028.1| 63897 64676 3 + 780 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67444.peg.239 CDS gi|387981740|gb|AJVH01000028.1| 64673 65293 2 + 621 FIG00546304: hypothetical protein - none -
fig|6666666.67444.peg.240 CDS gi|387981740|gb|AJVH01000028.1| 65308 67548 1 + 2241 putative integral membrane protein - none -
fig|6666666.67444.peg.241 CDS gi|387981740|gb|AJVH01000028.1| 67550 68593 2 + 1044 probable integral membrane protein - none -
fig|6666666.67444.peg.242 CDS gi|387981740|gb|AJVH01000028.1| 68590 68988 1 + 399 FIG00544939: hypothetical protein - none -
fig|6666666.67444.peg.243 CDS gi|387981740|gb|AJVH01000028.1| 69547 69723 1 + 177 hypothetical protein - none -
fig|6666666.67444.peg.244 CDS gi|387981740|gb|AJVH01000028.1| 73138 70139 -1 - 3000 hypothetical protein - none -
fig|6666666.67444.peg.245 CDS gi|387981740|gb|AJVH01000028.1| 74587 73556 -1 - 1032 Secreted Endo-beta-N-acetylglucosaminidase (EndoS) - none -
fig|6666666.67444.peg.246 CDS gi|387981740|gb|AJVH01000028.1| 76299 74749 -3 - 1551 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67444.peg.247 CDS gi|387981740|gb|AJVH01000028.1| 81071 76311 -2 - 4761 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67444.peg.248 CDS gi|387981740|gb|AJVH01000028.1| 82984 81170 -1 - 1815 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.249 CDS gi|387981740|gb|AJVH01000028.1| 83970 83059 -3 - 912 hypothetical protein Rv3802c - none -
fig|6666666.67444.peg.250 CDS gi|387981740|gb|AJVH01000028.1| 84491 83976 -2 - 516 FIG00544389: hypothetical protein - none -
fig|6666666.67444.peg.251 CDS gi|387981740|gb|AJVH01000028.1| 86407 84491 -1 - 1917 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67444.peg.252 CDS gi|387981740|gb|AJVH01000028.1| 87784 86768 -1 - 1017 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67444.peg.253 CDS gi|387981740|gb|AJVH01000028.1| 89639 87951 -2 - 1689 hypothetical protein Rv3805c - none -
fig|6666666.67444.peg.254 CDS gi|387981740|gb|AJVH01000028.1| 90625 89648 -1 - 978 putative membrane protein - none -
fig|6666666.67444.peg.255 CDS gi|387981740|gb|AJVH01000028.1| 91116 90622 -3 - 495 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67444.peg.256 CDS gi|387981740|gb|AJVH01000028.1| 93101 91116 -2 - 1986 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67444.peg.257 CDS gi|387981740|gb|AJVH01000028.1| 93671 93186 -2 - 486 membrane-associated phospholipid phosphatase - none -
fig|6666666.67444.peg.258 CDS gi|387981740|gb|AJVH01000028.1| 95319 93742 -3 - 1578 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67444.peg.259 CDS gi|387981740|gb|AJVH01000028.1| 97611 95386 -3 - 2226 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67444.peg.260 CDS gi|387981740|gb|AJVH01000028.1| 97883 99676 2 + 1794 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67444.peg.261 CDS gi|387981740|gb|AJVH01000028.1| 101026 99863 -1 - 1164 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67444.peg.262 CDS gi|387981740|gb|AJVH01000028.1| 101841 101065 -3 - 777 hypothetical protein - none -
fig|6666666.67444.peg.263 CDS gi|387981740|gb|AJVH01000028.1| 102370 101834 -1 - 537 Putative DNA-binding protein - none -
fig|6666666.67444.peg.264 CDS gi|387981740|gb|AJVH01000028.1| 103154 102855 -2 - 300 ABC transporter related - none -
fig|6666666.67444.peg.265 CDS gi|387981740|gb|AJVH01000028.1| 103621 105441 1 + 1821 FIG00544841: hypothetical protein - none -
fig|6666666.67444.peg.266 CDS gi|387981740|gb|AJVH01000028.1| 105706 105563 -1 - 144 hypothetical protein - none -
fig|6666666.67444.peg.267 CDS gi|387981740|gb|AJVH01000028.1| 105920 105687 -2 - 234 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.67444.peg.268 CDS gi|387981740|gb|AJVH01000028.1| 106230 106352 3 + 123 hypothetical protein - none -
fig|6666666.67444.peg.269 CDS gi|387981740|gb|AJVH01000028.1| 106658 106915 2 + 258 hypothetical protein - none -
fig|6666666.67444.peg.270 CDS gi|387981740|gb|AJVH01000028.1| 106977 107222 3 + 246 Putative transposase - none -
fig|6666666.67444.peg.271 CDS gi|387981740|gb|AJVH01000028.1| 107236 107355 1 + 120 Mobile element protein - none -
fig|6666666.67444.peg.272 CDS gi|387981740|gb|AJVH01000028.1| 107795 107679 -2 - 117 hypothetical protein - none -
fig|6666666.67444.peg.273 CDS gi|387981740|gb|AJVH01000028.1| 110813 109293 -2 - 1521 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.274 CDS gi|387981740|gb|AJVH01000028.1| 111572 110832 -2 - 741 Glycerol uptake facilitator protein Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerol fermentation to 1,3-propanediol;
Osmoregulation
fig|6666666.67444.peg.275 CDS gi|387981740|gb|AJVH01000028.1| 113296 111572 -1 - 1725 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.67444.peg.276 CDS gi|387981740|gb|AJVH01000028.1| 115326 113494 -3 - 1833 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.277 CDS gi|387981740|gb|AJVH01000028.1| 116166 115339 -3 - 828 Hydrolase (HAD superfamily) - none -
fig|6666666.67444.peg.278 CDS gi|387981740|gb|AJVH01000028.1| 117455 116196 -2 - 1260 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67444.peg.279 CDS gi|387981740|gb|AJVH01000028.1| 117580 118326 1 + 747 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.67444.peg.280 CDS gi|387981740|gb|AJVH01000028.1| 118337 119329 2 + 993 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67444.peg.281 CDS gi|387981740|gb|AJVH01000028.1| 119336 119683 2 + 348 FIG00544953: hypothetical protein - none -
fig|6666666.67444.peg.282 CDS gi|387981740|gb|AJVH01000028.1| 119758 121005 1 + 1248 Putative ATP/GTP binding protein - none -
fig|6666666.67444.peg.283 CDS gi|387981740|gb|AJVH01000028.1| 121635 120991 -3 - 645 putative phosphoglycerate mutase - none -
fig|6666666.67444.peg.284 CDS gi|387981740|gb|AJVH01000028.1| 122564 121662 -2 - 903 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67444.peg.285 CDS gi|387981740|gb|AJVH01000028.1| 122600 123736 2 + 1137 putative amidase - none -
fig|6666666.67444.peg.286 CDS gi|387981740|gb|AJVH01000028.1| 123733 124449 1 + 717 Putative conserved integral membrane protein - none -
fig|6666666.67444.peg.287 CDS gi|387981740|gb|AJVH01000028.1| 126724 124433 -1 - 2292 Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent Nitrosative stress
fig|6666666.67444.peg.288 CDS gi|387981740|gb|AJVH01000028.1| 126979 127101 1 + 123 hypothetical protein - none -
fig|6666666.67444.peg.289 CDS gi|387981740|gb|AJVH01000028.1| 127122 128231 3 + 1110 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67444.peg.290 CDS gi|387981740|gb|AJVH01000028.1| 129850 128360 -1 - 1491 sodium/alanine symporter family protein - none -
fig|6666666.67444.peg.291 CDS gi|387981740|gb|AJVH01000028.1| 130041 131834 3 + 1794 O-antigen acetylase - none -
fig|6666666.67444.peg.292 CDS gi|387981740|gb|AJVH01000028.1| 132801 131896 -3 - 906 FIG00548032: hypothetical protein - none -
fig|6666666.67444.peg.293 CDS gi|387981740|gb|AJVH01000028.1| 133496 132813 -2 - 684 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67444.peg.294 CDS gi|387981740|gb|AJVH01000028.1| 134597 133641 -2 - 957 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.67444.peg.295 CDS gi|387981740|gb|AJVH01000028.1| 135606 134956 -3 - 651 Nudix-related transcriptional regulator NrtR NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.296 CDS gi|387981740|gb|AJVH01000028.1| 135738 136655 3 + 918 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.297 CDS gi|387981740|gb|AJVH01000028.1| 136652 137881 2 + 1230 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.298 CDS gi|387981740|gb|AJVH01000028.1| 137869 138696 1 + 828 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.299 CDS gi|387981740|gb|AJVH01000028.1| 139688 138903 -2 - 786 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67444.peg.300 CDS gi|387981740|gb|AJVH01000028.1| 139719 140318 3 + 600 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67444.peg.301 CDS gi|387981740|gb|AJVH01000028.1| 140568 141104 3 + 537 FMN reductase, NADPH-dependent - none -
fig|6666666.67444.peg.302 CDS gi|387981740|gb|AJVH01000028.1| 142453 141101 -1 - 1353 putative membrane protein - none -
fig|6666666.67444.peg.303 CDS gi|387981740|gb|AJVH01000028.1| 144038 142467 -2 - 1572 FIG00544355: hypothetical protein - none -
fig|6666666.67444.peg.304 CDS gi|387981740|gb|AJVH01000028.1| 144151 144783 1 + 633 FIG071084: hypothetical protein - none -
fig|6666666.67444.peg.305 CDS gi|387981740|gb|AJVH01000028.1| 144941 145258 2 + 318 FIG00545047: hypothetical protein - none -
fig|6666666.67444.peg.306 CDS gi|387981740|gb|AJVH01000028.1| 145955 145317 -2 - 639 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.307 CDS gi|387981740|gb|AJVH01000028.1| 147329 146037 -2 - 1293 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.308 CDS gi|387981740|gb|AJVH01000028.1| 147292 147897 1 + 606 FIG00544353: hypothetical protein - none -
fig|6666666.67444.peg.309 CDS gi|387981740|gb|AJVH01000028.1| 148039 149439 1 + 1401 Hexose phosphate transport protein UhpT - none -
fig|6666666.67444.peg.310 CDS gi|387981740|gb|AJVH01000028.1| 149654 149502 -2 - 153 FIG060545: short hypothetical protein - none -
fig|6666666.67444.peg.311 CDS gi|387981740|gb|AJVH01000028.1| 150482 149661 -2 - 822 FIG054872: Sortase-like protein - none -
fig|6666666.67444.peg.312 CDS gi|387981740|gb|AJVH01000028.1| 150614 151921 2 + 1308 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67444.peg.313 CDS gi|387981740|gb|AJVH01000028.1| 152956 152693 -1 - 264 FIG00545001: hypothetical protein - none -
fig|6666666.67444.peg.314 CDS gi|387981740|gb|AJVH01000028.1| 154141 153239 -1 - 903 Universal stress protein family - none -
fig|6666666.67444.peg.315 CDS gi|387981740|gb|AJVH01000028.1| 154444 154307 -1 - 138 FIG00544217: hypothetical protein - none -
fig|6666666.67444.peg.316 CDS gi|387981740|gb|AJVH01000028.1| 154763 155428 2 + 666 Similar to ribosomal large subunit pseudouridine synthase D, type RluD4 RNA pseudouridine syntheses
fig|6666666.67444.peg.317 CDS gi|387981864|gb|AJVH01000027.1| 1612 92 -1 - 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67444.peg.318 CDS gi|387981864|gb|AJVH01000027.1| 1900 2685 1 + 786 Putative membrane anchored protein - none -
fig|6666666.67444.peg.319 CDS gi|387981864|gb|AJVH01000027.1| 2682 3503 3 + 822 Putative membrane anchored protein - none -
fig|6666666.67444.peg.320 CDS gi|387981864|gb|AJVH01000027.1| 3958 3560 -1 - 399 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67444.peg.321 CDS gi|387981864|gb|AJVH01000027.1| 5152 3980 -1 - 1173 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67444.peg.322 CDS gi|387981864|gb|AJVH01000027.1| 5921 5262 -2 - 660 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67444.peg.323 CDS gi|387981864|gb|AJVH01000027.1| 7756 5921 -1 - 1836 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67444.peg.324 CDS gi|387981864|gb|AJVH01000027.1| 8170 9474 1 + 1305 hypothetical protein - none -
fig|6666666.67444.peg.325 CDS gi|387981864|gb|AJVH01000027.1| 9524 10846 2 + 1323 putative integral membrane protein - none -
fig|6666666.67444.peg.326 CDS gi|387981864|gb|AJVH01000027.1| 11562 10921 -3 - 642 Putative ABC transport system, ATP-binding subunit - none -
fig|6666666.67444.peg.327 CDS gi|387981864|gb|AJVH01000027.1| 13177 11549 -1 - 1629 putative binding-protein-dependent integral membrane transport protein - none -
fig|6666666.67444.peg.328 CDS gi|387981864|gb|AJVH01000027.1| 14168 13170 -2 - 999 dipeptide/oligopeptide ABC transporter, permease protein - none -
fig|6666666.67444.peg.329 CDS gi|387981864|gb|AJVH01000027.1| 15773 14169 -2 - 1605 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.67444.peg.330 CDS gi|387981864|gb|AJVH01000027.1| 15967 15818 -1 - 150 hypothetical protein - none -
fig|6666666.67444.peg.331 CDS gi|387981864|gb|AJVH01000027.1| 17561 15975 -2 - 1587 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67444.peg.332 CDS gi|387981864|gb|AJVH01000027.1| 18108 18224 3 + 117 hypothetical protein - none -
fig|6666666.67444.peg.333 CDS gi|387981878|gb|AJVH01000026.1| 2010 976 -3 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67444.peg.334 CDS gi|387981878|gb|AJVH01000026.1| 3256 2129 -1 - 1128 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67444.peg.335 CDS gi|387981878|gb|AJVH01000026.1| 3936 3268 -3 - 669 probable RNA methyltransferase - none -
fig|6666666.67444.peg.336 CDS gi|387981878|gb|AJVH01000026.1| 4462 3929 -1 - 534 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67444.peg.337 CDS gi|387981878|gb|AJVH01000026.1| 5432 4518 -2 - 915 FIG00544840: hypothetical protein - none -
fig|6666666.67444.peg.338 CDS gi|387981878|gb|AJVH01000026.1| 6256 5432 -1 - 825 Rhodanese-related sulfurtransferase - none -
fig|6666666.67444.peg.339 CDS gi|387981878|gb|AJVH01000026.1| 6418 6278 -1 - 141 hypothetical protein - none -
fig|6666666.67444.peg.340 CDS gi|387981878|gb|AJVH01000026.1| 6683 6465 -2 - 219 hypothetical protein - none -
fig|6666666.67444.peg.341 CDS gi|387981878|gb|AJVH01000026.1| 6914 6744 -2 - 171 hypothetical protein - none -
fig|6666666.67444.peg.342 CDS gi|387981878|gb|AJVH01000026.1| 7172 7360 2 + 189 hypothetical protein - none -
fig|6666666.67444.peg.343 CDS gi|387981878|gb|AJVH01000026.1| 10942 8393 -1 - 2550 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67444.peg.344 CDS gi|387981878|gb|AJVH01000026.1| 11470 11141 -1 - 330 FIG00545313: hypothetical protein - none -
fig|6666666.67444.peg.345 CDS gi|387981878|gb|AJVH01000026.1| 11598 12386 3 + 789 putative ABC transporter, ATP-binding protein - none -
fig|6666666.67444.peg.346 CDS gi|387981878|gb|AJVH01000026.1| 12388 13956 1 + 1569 putative integral membrane transport protein - none -
fig|6666666.67444.peg.347 CDS gi|387981878|gb|AJVH01000026.1| 14167 14382 1 + 216 hypothetical protein - none -
fig|6666666.67444.peg.348 CDS gi|387981878|gb|AJVH01000026.1| 14707 14336 -1 - 372 Putative integral membrane protein - none -
fig|6666666.67444.peg.349 CDS gi|387981878|gb|AJVH01000026.1| 16469 15132 -2 - 1338 Putative integral membrane protein - none -
fig|6666666.67444.peg.350 CDS gi|387981878|gb|AJVH01000026.1| 17648 16596 -2 - 1053 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.351 CDS gi|387981878|gb|AJVH01000026.1| 17716 18810 1 + 1095 oxidoreductase, putative - none -
fig|6666666.67444.peg.352 CDS gi|387981878|gb|AJVH01000026.1| 19559 18789 -2 - 771 Omega amidase (Nit2 homolog) - none -
fig|6666666.67444.peg.353 CDS gi|387981878|gb|AJVH01000026.1| 19530 19676 3 + 147 hypothetical protein - none -
fig|6666666.67444.peg.354 CDS gi|387981878|gb|AJVH01000026.1| 19716 19955 3 + 240 hypothetical protein - none -
fig|6666666.67444.peg.355 CDS gi|387981878|gb|AJVH01000026.1| 19943 21073 2 + 1131 FIG00544569: hypothetical protein - none -
fig|6666666.67444.peg.356 CDS gi|387981878|gb|AJVH01000026.1| 22100 21060 -2 - 1041 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.357 CDS gi|387981903|gb|AJVH01000025.1| 61 543 1 + 483 Mobile element protein - none -
fig|6666666.67444.peg.358 CDS gi|387981903|gb|AJVH01000025.1| 609 1403 3 + 795 Mobile element protein - none -
fig|6666666.67444.peg.359 CDS gi|387981907|gb|AJVH01000024.1| 329 1537 2 + 1209 Mobile element protein - none -
fig|6666666.67444.peg.360 CDS gi|387981913|gb|AJVH01000022.1| 831 19 -3 - 813 Mobile element protein - none -
fig|6666666.67444.peg.361 CDS gi|387981913|gb|AJVH01000022.1| 1156 908 -1 - 249 hypothetical protein - none -
fig|6666666.67444.peg.362 CDS gi|387981919|gb|AJVH01000021.1| 652 2187 1 + 1536 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67444.peg.363 CDS gi|387981919|gb|AJVH01000021.1| 2195 3169 2 + 975 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67444.peg.364 CDS gi|387981919|gb|AJVH01000021.1| 3166 4737 1 + 1572 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67444.peg.365 CDS gi|387981919|gb|AJVH01000021.1| 4734 6281 3 + 1548 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67444.peg.366 CDS gi|387981919|gb|AJVH01000021.1| 7875 6361 -3 - 1515 putative coenzyme A transferase - none -
fig|6666666.67444.peg.367 CDS gi|387981919|gb|AJVH01000021.1| 8209 9360 1 + 1152 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67444.peg.368 CDS gi|387981919|gb|AJVH01000021.1| 9379 10131 1 + 753 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67444.peg.369 CDS gi|387981919|gb|AJVH01000021.1| 10494 10282 -3 - 213 hypothetical protein - none -
fig|6666666.67444.peg.370 CDS gi|387981919|gb|AJVH01000021.1| 10835 10662 -2 - 174 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67444.peg.371 CDS gi|387981919|gb|AJVH01000021.1| 11051 10836 -2 - 216 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67444.peg.372 CDS gi|387981919|gb|AJVH01000021.1| 12142 11231 -1 - 912 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67444.peg.373 CDS gi|387981919|gb|AJVH01000021.1| 12181 12984 1 + 804 FIG00544976: hypothetical protein - none -
fig|6666666.67444.peg.374 CDS gi|387981919|gb|AJVH01000021.1| 14046 12994 -3 - 1053 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.67444.peg.375 CDS gi|387981919|gb|AJVH01000021.1| 14086 14733 1 + 648 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67444.peg.376 CDS gi|387981919|gb|AJVH01000021.1| 15636 14740 -3 - 897 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67444.peg.377 CDS gi|387981919|gb|AJVH01000021.1| 15690 16793 3 + 1104 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67444.peg.378 CDS gi|387981919|gb|AJVH01000021.1| 17014 17220 1 + 207 FIG00544089: hypothetical protein - none -
fig|6666666.67444.peg.379 CDS gi|387981919|gb|AJVH01000021.1| 18414 17350 -3 - 1065 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67444.peg.380 CDS gi|387981919|gb|AJVH01000021.1| 20047 18473 -1 - 1575 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67444.peg.381 CDS gi|387981919|gb|AJVH01000021.1| 20483 20088 -2 - 396 FIG00544811: hypothetical protein - none -
fig|6666666.67444.peg.382 CDS gi|387981919|gb|AJVH01000021.1| 20482 20679 1 + 198 hypothetical protein - none -
fig|6666666.67444.peg.383 CDS gi|387981919|gb|AJVH01000021.1| 20676 20819 3 + 144 hypothetical protein - none -
fig|6666666.67444.peg.384 CDS gi|387981919|gb|AJVH01000021.1| 21523 20822 -1 - 702 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67444.peg.385 CDS gi|387981919|gb|AJVH01000021.1| 21748 22173 1 + 426 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67444.peg.386 CDS gi|387981919|gb|AJVH01000021.1| 22170 23195 3 + 1026 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67444.peg.387 CDS gi|387981919|gb|AJVH01000021.1| 23293 23418 1 + 126 hypothetical protein - none -
fig|6666666.67444.peg.388 CDS gi|387981919|gb|AJVH01000021.1| 23689 23519 -1 - 171 hypothetical protein - none -
fig|6666666.67444.peg.389 CDS gi|387981919|gb|AJVH01000021.1| 23835 23996 3 + 162 hypothetical protein - none -
fig|6666666.67444.peg.390 CDS gi|387981919|gb|AJVH01000021.1| 24290 24030 -2 - 261 Putative integral membrane protein - none -
fig|6666666.67444.peg.391 CDS gi|387981919|gb|AJVH01000021.1| 25381 24911 -1 - 471 Putative glutathione peroxidase - none -
fig|6666666.67444.peg.392 CDS gi|387981919|gb|AJVH01000021.1| 27434 25383 -2 - 2052 Protease II (EC 3.4.21.83) - none -
fig|6666666.67444.peg.393 CDS gi|387981919|gb|AJVH01000021.1| 27511 27723 1 + 213 hypothetical protein - none -
fig|6666666.67444.peg.394 CDS gi|387981919|gb|AJVH01000021.1| 28702 27803 -1 - 900 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67444.peg.395 CDS gi|387981919|gb|AJVH01000021.1| 30221 28782 -2 - 1440 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67444.peg.396 CDS gi|387981919|gb|AJVH01000021.1| 31315 30221 -1 - 1095 Valine--pyruvate aminotransferase (EC 2.6.1.66) ## AvtA Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67444.peg.397 CDS gi|387981919|gb|AJVH01000021.1| 31988 31368 -2 - 621 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.67444.peg.398 CDS gi|387981919|gb|AJVH01000021.1| 33351 32017 -3 - 1335 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.67444.peg.399 CDS gi|387981919|gb|AJVH01000021.1| 34721 33435 -2 - 1287 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67444.peg.400 CDS gi|387981919|gb|AJVH01000021.1| 34800 35225 3 + 426 HIT family protein - none -
fig|6666666.67444.peg.401 CDS gi|387981919|gb|AJVH01000021.1| 35242 35907 1 + 666 hypothetical protein - none -
fig|6666666.67444.peg.402 CDS gi|387981919|gb|AJVH01000021.1| 37480 35921 -1 - 1560 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67444.peg.403 CDS gi|387981919|gb|AJVH01000021.1| 38226 37516 -3 - 711 two-component system, response regulator - none -
fig|6666666.67444.peg.404 CDS gi|387981919|gb|AJVH01000021.1| 39199 39074 -1 - 126 hypothetical protein - none -
fig|6666666.67444.peg.405 CDS gi|387981919|gb|AJVH01000021.1| 39198 40697 3 + 1500 FIG00544776: hypothetical protein - none -
fig|6666666.67444.peg.406 CDS gi|387981919|gb|AJVH01000021.1| 40684 41304 1 + 621 FIG00548485: hypothetical protein - none -
fig|6666666.67444.peg.407 CDS gi|387981919|gb|AJVH01000021.1| 41360 43273 2 + 1914 xanthine/uracil permease - none -
fig|6666666.67444.peg.408 CDS gi|387981919|gb|AJVH01000021.1| 43395 43523 3 + 129 hypothetical protein - none -
fig|6666666.67444.peg.409 CDS gi|387981919|gb|AJVH01000021.1| 43753 43631 -1 - 123 hypothetical protein - none -
fig|6666666.67444.peg.410 CDS gi|387981919|gb|AJVH01000021.1| 45551 43815 -2 - 1737 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67444.peg.411 CDS gi|387981919|gb|AJVH01000021.1| 45664 47115 1 + 1452 Putative amino acid export carrier protein - none -
fig|6666666.67444.peg.412 CDS gi|387981919|gb|AJVH01000021.1| 47273 47112 -2 - 162 hypothetical protein - none -
fig|6666666.67444.peg.413 CDS gi|387981919|gb|AJVH01000021.1| 47514 49058 3 + 1545 Putative amino acid export carrier protein - none -
fig|6666666.67444.peg.414 CDS gi|387981919|gb|AJVH01000021.1| 49119 49463 3 + 345 Putative uncharacterized protein - none -
fig|6666666.67444.peg.415 CDS gi|387981919|gb|AJVH01000021.1| 49472 50911 2 + 1440 Trehalose-6-phosphate synthase (EC 2.4.1.15) - none -
fig|6666666.67444.peg.416 CDS gi|387981919|gb|AJVH01000021.1| 50942 51421 2 + 480 FIG00544334: hypothetical protein - none -
fig|6666666.67444.peg.417 CDS gi|387981919|gb|AJVH01000021.1| 51411 52169 3 + 759 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67444.peg.418 CDS gi|387981919|gb|AJVH01000021.1| 53271 52132 -3 - 1140 Transcriptional regulator, LacI family - none -
fig|6666666.67444.peg.419 CDS gi|387981919|gb|AJVH01000021.1| 54222 53281 -3 - 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67444.peg.420 CDS gi|387981919|gb|AJVH01000021.1| 55641 54250 -3 - 1392 Cysteinyl-tRNA synthetase (EC 6.1.1.16) Zinc regulated enzymes;
tRNA aminoacylation, Cys
fig|6666666.67444.peg.421 CDS gi|387981919|gb|AJVH01000021.1| 56142 55660 -3 - 483 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67444.peg.422 CDS gi|387981919|gb|AJVH01000021.1| 56845 56135 -1 - 711 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67444.peg.423 CDS gi|387981919|gb|AJVH01000021.1| 57460 56879 -1 - 582 CarD-like transcriptional regulator - none -
fig|6666666.67444.peg.424 CDS gi|387981919|gb|AJVH01000021.1| 57422 57673 2 + 252 hypothetical protein - none -
fig|6666666.67444.peg.425 CDS gi|387981919|gb|AJVH01000021.1| 57731 58297 2 + 567 FIG00544037: hypothetical protein - none -
fig|6666666.67444.peg.426 CDS gi|387981919|gb|AJVH01000021.1| 59861 58401 -2 - 1461 Putative membrane protein - none -
fig|6666666.67444.peg.427 CDS gi|387981919|gb|AJVH01000021.1| 60158 61549 2 + 1392 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67444.peg.428 CDS gi|387981919|gb|AJVH01000021.1| 62293 61577 -1 - 717 FIG00544149: hypothetical protein - none -
fig|6666666.67444.peg.429 CDS gi|387981919|gb|AJVH01000021.1| 62992 62363 -1 - 630 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.67444.peg.430 CDS gi|387981919|gb|AJVH01000021.1| 63123 64010 3 + 888 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67444.peg.431 CDS gi|387981919|gb|AJVH01000021.1| 65284 64007 -1 - 1278 FIG00545264: hypothetical protein - none -
fig|6666666.67444.peg.432 CDS gi|387981919|gb|AJVH01000021.1| 65561 65391 -2 - 171 FIG00543978: hypothetical protein - none -
fig|6666666.67444.peg.433 CDS gi|387981919|gb|AJVH01000021.1| 68228 65592 -2 - 2637 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67444.peg.434 CDS gi|387981919|gb|AJVH01000021.1| 69132 68677 -3 - 456 hypothetical protein - none -
fig|6666666.67444.peg.435 CDS gi|387981919|gb|AJVH01000021.1| 69168 69806 3 + 639 Putative membrane protein - none -
fig|6666666.67444.peg.436 CDS gi|387981919|gb|AJVH01000021.1| 70093 70707 1 + 615 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative Triacylglycerol metabolism;
Triacylglycerol metabolism
fig|6666666.67444.peg.437 CDS gi|387981919|gb|AJVH01000021.1| 72006 70723 -3 - 1284 Thymidine phosphorylase (EC 2.4.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67444.peg.438 CDS gi|387981919|gb|AJVH01000021.1| 72216 72638 3 + 423 Cytidine deaminase (EC 3.5.4.5) - none -
fig|6666666.67444.peg.439 CDS gi|387981919|gb|AJVH01000021.1| 72642 73856 3 + 1215 Nucleoside permease NupC - none -
fig|6666666.67444.peg.440 CDS gi|387981919|gb|AJVH01000021.1| 74048 74173 2 + 126 hypothetical protein - none -
fig|6666666.67444.peg.441 CDS gi|387981919|gb|AJVH01000021.1| 74540 74358 -2 - 183 hypothetical protein - none -
fig|6666666.67444.peg.442 CDS gi|387981919|gb|AJVH01000021.1| 76155 74593 -3 - 1563 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67444.peg.443 CDS gi|387981919|gb|AJVH01000021.1| 76306 77757 1 + 1452 transposase - none -
fig|6666666.67444.peg.444 CDS gi|387981919|gb|AJVH01000021.1| 78535 77777 -1 - 759 Putative membrane protein - none -
fig|6666666.67444.peg.445 CDS gi|387981919|gb|AJVH01000021.1| 79455 78532 -3 - 924 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.67444.peg.446 CDS gi|387981919|gb|AJVH01000021.1| 79627 79842 1 + 216 Mobile element protein - none -
fig|6666666.67444.peg.447 CDS gi|387981919|gb|AJVH01000021.1| 79930 80898 1 + 969 Membrane protease family protein BA0301 - none -
fig|6666666.67444.peg.448 CDS gi|387981919|gb|AJVH01000021.1| 80898 81095 3 + 198 FIG00545968: hypothetical protein - none -
fig|6666666.67444.peg.449 CDS gi|387981919|gb|AJVH01000021.1| 81145 82437 1 + 1293 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.67444.peg.450 CDS gi|387981919|gb|AJVH01000021.1| 83233 82454 -1 - 780 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67444.peg.451 CDS gi|387981919|gb|AJVH01000021.1| 83869 83246 -1 - 624 FIG173306: hypothetical protein - none -
fig|6666666.67444.peg.452 CDS gi|387981919|gb|AJVH01000021.1| 84783 83866 -3 - 918 FIG00544686: hypothetical protein - none -
fig|6666666.67444.peg.453 CDS gi|387981919|gb|AJVH01000021.1| 85252 84785 -1 - 468 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67444.peg.454 CDS gi|387981919|gb|AJVH01000021.1| 85728 85249 -3 - 480 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67444.peg.455 CDS gi|387981919|gb|AJVH01000021.1| 86112 85738 -3 - 375 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67444.peg.456 CDS gi|387981919|gb|AJVH01000021.1| 86945 86109 -2 - 837 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67444.peg.457 CDS gi|387981919|gb|AJVH01000021.1| 87383 87069 -2 - 315 hypothetical protein - none -
fig|6666666.67444.peg.458 CDS gi|387981919|gb|AJVH01000021.1| 87958 87386 -1 - 573 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
Zinc regulated enzymes
fig|6666666.67444.peg.459 CDS gi|387981919|gb|AJVH01000021.1| 90431 87966 -2 - 2466 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67444.peg.460 CDS gi|387981919|gb|AJVH01000021.1| 91150 90563 -1 - 588 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67444.peg.461 CDS gi|387981919|gb|AJVH01000021.1| 92013 91171 -3 - 843 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67444.peg.462 CDS gi|387981919|gb|AJVH01000021.1| 93292 92042 -1 - 1251 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.463 CDS gi|387981919|gb|AJVH01000021.1| 93357 93833 3 + 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67444.peg.464 CDS gi|387981919|gb|AJVH01000021.1| 93990 94286 3 + 297 rhodanese-related sulfurtransferase - none -
fig|6666666.67444.peg.465 CDS gi|387981919|gb|AJVH01000021.1| 94383 94823 3 + 441 Transcriptional regulator, MarR family - none -
fig|6666666.67444.peg.466 CDS gi|387981919|gb|AJVH01000021.1| 94824 98627 3 + 3804 putative non-ribosomal peptide synthetase - none -
fig|6666666.67444.peg.467 CDS gi|387981919|gb|AJVH01000021.1| 104233 98624 -1 - 5610 hypothetical protein - none -
fig|6666666.67444.peg.468 CDS gi|387981919|gb|AJVH01000021.1| 104854 104237 -1 - 618 Putative surface anchored protein - none -
fig|6666666.67444.peg.469 CDS gi|387981919|gb|AJVH01000021.1| 105713 104844 -2 - 870 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67444.peg.470 CDS gi|387981919|gb|AJVH01000021.1| 107117 105714 -2 - 1404 Fimbrial subunit type 2 precursor - none -
fig|6666666.67444.peg.471 CDS gi|387981919|gb|AJVH01000021.1| 107888 108250 2 + 363 Putative membrane-anchored protein - none -
fig|6666666.67444.peg.472 CDS gi|387981919|gb|AJVH01000021.1| 108423 109694 3 + 1272 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67444.peg.473 CDS gi|387981919|gb|AJVH01000021.1| 110607 109711 -3 - 897 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67444.peg.474 CDS gi|387981919|gb|AJVH01000021.1| 111940 110693 -1 - 1248 Putative secreted protein - none -
fig|6666666.67444.peg.475 CDS gi|387981919|gb|AJVH01000021.1| 112187 112047 -2 - 141 Doubtful CDS. No significant database matches - none -
fig|6666666.67444.peg.476 CDS gi|387981919|gb|AJVH01000021.1| 112453 112277 -1 - 177 Putative transposase - none -
fig|6666666.67444.peg.477 CDS gi|387981919|gb|AJVH01000021.1| 114445 112805 -1 - 1641 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67444.peg.478 CDS gi|387981919|gb|AJVH01000021.1| 114973 114803 -1 - 171 hypothetical protein - none -
fig|6666666.67444.peg.479 CDS gi|387981919|gb|AJVH01000021.1| 115279 115070 -1 - 210 hypothetical protein - none -
fig|6666666.67444.peg.480 CDS gi|387981919|gb|AJVH01000021.1| 115592 116110 2 + 519 hypothetical protein - none -
fig|6666666.67444.peg.481 CDS gi|387981919|gb|AJVH01000021.1| 116107 116577 1 + 471 hypothetical protein - none -
fig|6666666.67444.peg.482 CDS gi|387981919|gb|AJVH01000021.1| 116584 116721 1 + 138 hypothetical protein - none -
fig|6666666.67444.peg.483 CDS gi|387981919|gb|AJVH01000021.1| 117868 116708 -1 - 1161 Protein RtcB - none -
fig|6666666.67444.peg.484 CDS gi|387981919|gb|AJVH01000021.1| 118252 118091 -1 - 162 hypothetical protein - none -
fig|6666666.67444.peg.485 CDS gi|387981919|gb|AJVH01000021.1| 119105 118863 -2 - 243 transposase for insertion sequence - none -
fig|6666666.67444.peg.486 CDS gi|387981919|gb|AJVH01000021.1| 119273 119154 -2 - 120 transposase for insertion sequence - none -
fig|6666666.67444.peg.487 CDS gi|387981919|gb|AJVH01000021.1| 120700 119618 -1 - 1083 NAD(P)H-dependent 2-cyclohexen-1-one reductase - none -
fig|6666666.67444.peg.488 CDS gi|387981919|gb|AJVH01000021.1| 121034 123706 2 + 2673 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67444.peg.489 CDS gi|387981919|gb|AJVH01000021.1| 123943 124479 1 + 537 ThiJ/PfpI family protein - none -
fig|6666666.67444.peg.490 CDS gi|387981919|gb|AJVH01000021.1| 124728 124597 -3 - 132 Putative transposase - none -
fig|6666666.67444.peg.491 CDS gi|387981919|gb|AJVH01000021.1| 124859 124725 -2 - 135 hypothetical protein - none -
fig|6666666.67444.peg.492 CDS gi|387981919|gb|AJVH01000021.1| 125203 125063 -1 - 141 Mobile element protein - none -
fig|6666666.67444.peg.493 CDS gi|387981919|gb|AJVH01000021.1| 125384 125235 -2 - 150 Mobile element protein - none -
fig|6666666.67444.peg.494 CDS gi|387981919|gb|AJVH01000021.1| 125534 126160 2 + 627 hypothetical protein - none -
fig|6666666.67444.peg.495 CDS gi|387981919|gb|AJVH01000021.1| 126653 126537 -2 - 117 hypothetical protein - none -
fig|6666666.67444.peg.496 CDS gi|387981919|gb|AJVH01000021.1| 126652 128013 1 + 1362 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67444.peg.497 CDS gi|387981919|gb|AJVH01000021.1| 128177 128374 2 + 198 No significant database matches - none -
fig|6666666.67444.peg.498 CDS gi|387981919|gb|AJVH01000021.1| 130556 129477 -2 - 1080 Putative cytoplasmic protein - none -
fig|6666666.67444.peg.499 CDS gi|387981919|gb|AJVH01000021.1| 131077 130553 -1 - 525 FIG00544658: hypothetical protein - none -
fig|6666666.67444.peg.500 CDS gi|387981919|gb|AJVH01000021.1| 131292 131089 -3 - 204 FIG00544061: hypothetical protein - none -
fig|6666666.67444.peg.501 CDS gi|387981919|gb|AJVH01000021.1| 131291 131854 2 + 564 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Translation termination factors bacterial
fig|6666666.67444.peg.502 CDS gi|387981919|gb|AJVH01000021.1| 131871 132779 3 + 909 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67444.peg.503 CDS gi|387981919|gb|AJVH01000021.1| 132784 133491 1 + 708 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67444.peg.504 CDS gi|387981919|gb|AJVH01000021.1| 133488 134921 3 + 1434 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.505 CDS gi|387981919|gb|AJVH01000021.1| 135183 135010 -3 - 174 hypothetical protein - none -
fig|6666666.67444.peg.506 CDS gi|387981919|gb|AJVH01000021.1| 135309 135190 -3 - 120 hypothetical protein - none -
fig|6666666.67444.peg.507 CDS gi|387981919|gb|AJVH01000021.1| 136138 135401 -1 - 738 Putative ABC transport system membrane protein - none -
fig|6666666.67444.peg.508 CDS gi|387981919|gb|AJVH01000021.1| 137018 136122 -2 - 897 putative ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.509 CDS gi|387981919|gb|AJVH01000021.1| 137131 138309 1 + 1179 FIG00543876: hypothetical protein - none -
fig|6666666.67444.peg.510 CDS gi|387981919|gb|AJVH01000021.1| 138306 139253 3 + 948 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67444.peg.511 CDS gi|387981919|gb|AJVH01000021.1| 139250 141412 2 + 2163 serine/threonine protein kinase - none -
fig|6666666.67444.peg.512 CDS gi|387981919|gb|AJVH01000021.1| 142631 141432 -2 - 1200 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67444.peg.513 CDS gi|387981919|gb|AJVH01000021.1| 144011 142632 -2 - 1380 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67444.peg.514 CDS gi|387981919|gb|AJVH01000021.1| 144262 145620 1 + 1359 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) - none -
fig|6666666.67444.peg.515 CDS gi|387981919|gb|AJVH01000021.1| 145976 145632 -2 - 345 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67444.peg.516 CDS gi|387982061|gb|AJVH01000020.1| 1415 159 -2 - 1257 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67444.peg.517 CDS gi|387982061|gb|AJVH01000020.1| 1454 2029 2 + 576 Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) G3E family of P-loop GTPases (metallocenter biosynthesis);
Glycerol fermentation to 1,3-propanediol
fig|6666666.67444.peg.518 CDS gi|387982061|gb|AJVH01000020.1| 2927 2082 -2 - 846 Putative transcriptional regulator - none -
fig|6666666.67444.peg.519 CDS gi|387982061|gb|AJVH01000020.1| 3611 4546 2 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67444.peg.520 CDS gi|387982061|gb|AJVH01000020.1| 4653 5219 3 + 567 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67444.peg.521 CDS gi|387982061|gb|AJVH01000020.1| 5542 5261 -1 - 282 predicted acetyltransferase - none -
fig|6666666.67444.peg.522 CDS gi|387982061|gb|AJVH01000020.1| 7000 5924 -1 - 1077 Glycerol dehydrogenase (EC 1.1.1.6) Respiratory dehydrogenases 1
fig|6666666.67444.peg.523 CDS gi|387982061|gb|AJVH01000020.1| 7669 7439 -1 - 231 Probable ATP-binding component of ABC transporter - none -
fig|6666666.67444.peg.524 CDS gi|387982061|gb|AJVH01000020.1| 8206 7820 -1 - 387 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.67444.peg.525 CDS gi|387982061|gb|AJVH01000020.1| 9220 8213 -1 - 1008 putative ABC-type transporter, periplasmic component - none -
fig|6666666.67444.peg.526 CDS gi|387982061|gb|AJVH01000020.1| 10167 9241 -3 - 927 putative permease, FecCD transport family protein - none -
fig|6666666.67444.peg.527 CDS gi|387982061|gb|AJVH01000020.1| 13122 10543 -3 - 2580 FIG00946055: hypothetical protein - none -
fig|6666666.67444.peg.528 CDS gi|387982061|gb|AJVH01000020.1| 15116 13122 -2 - 1995 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.67444.peg.529 CDS gi|387982075|gb|AJVH01000019.1| 1938 685 -3 - 1254 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67444.peg.530 CDS gi|387982075|gb|AJVH01000019.1| 3769 2075 -1 - 1695 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67444.peg.531 CDS gi|387982075|gb|AJVH01000019.1| 5117 4131 -2 - 987 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67444.peg.532 CDS gi|387982075|gb|AJVH01000019.1| 5429 5914 2 + 486 Putative bacterioferritin - none -
fig|6666666.67444.peg.533 CDS gi|387982075|gb|AJVH01000019.1| 8125 5966 -1 - 2160 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67444.peg.534 CDS gi|387982075|gb|AJVH01000019.1| 8600 8175 -2 - 426 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67444.peg.535 CDS gi|387982075|gb|AJVH01000019.1| 8927 8694 -2 - 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67444.peg.536 CDS gi|387982075|gb|AJVH01000019.1| 9230 10102 2 + 873 Phytoene synthase (EC 2.5.1.32) Carotenoids
fig|6666666.67444.peg.537 CDS gi|387982075|gb|AJVH01000019.1| 10095 11621 3 + 1527 Phytoene dehydrogenase (EC 1.14.99.-) Carotenoids
fig|6666666.67444.peg.538 CDS gi|387982075|gb|AJVH01000019.1| 11810 11688 -2 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67444.peg.539 CDS gi|387982075|gb|AJVH01000019.1| 11979 12797 3 + 819 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.540 CDS gi|387982075|gb|AJVH01000019.1| 13231 12794 -1 - 438 probable DNA-binding protein - none -
fig|6666666.67444.peg.541 CDS gi|387982075|gb|AJVH01000019.1| 13550 13278 -2 - 273 hypothetical protein - none -
fig|6666666.67444.peg.542 CDS gi|387982075|gb|AJVH01000019.1| 14978 13590 -2 - 1389 Multicopper oxidase Copper homeostasis
fig|6666666.67444.peg.543 CDS gi|387982075|gb|AJVH01000019.1| 16260 14968 -3 - 1293 Putative membrane protein - none -
fig|6666666.67444.peg.544 CDS gi|387982075|gb|AJVH01000019.1| 17328 16264 -3 - 1065 FIG00548476: hypothetical protein - none -
fig|6666666.67444.peg.545 CDS gi|387982075|gb|AJVH01000019.1| 17465 18130 2 + 666 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN - none -
fig|6666666.67444.peg.546 CDS gi|387982075|gb|AJVH01000019.1| 19065 18331 -3 - 735 FIG00544592: hypothetical protein - none -
fig|6666666.67444.peg.547 CDS gi|387982075|gb|AJVH01000019.1| 19591 19115 -1 - 477 FIG00544597: hypothetical protein - none -
fig|6666666.67444.peg.548 CDS gi|387982075|gb|AJVH01000019.1| 21252 19615 -3 - 1638 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.67444.peg.549 CDS gi|387982075|gb|AJVH01000019.1| 21318 21605 3 + 288 camphor resistance protein CrcB - none -
fig|6666666.67444.peg.550 CDS gi|387982075|gb|AJVH01000019.1| 21602 21916 2 + 315 CrcB protein - none -
fig|6666666.67444.peg.551 CDS gi|387982075|gb|AJVH01000019.1| 24477 21913 -3 - 2565 ABC-type transporter, permease component - none -
fig|6666666.67444.peg.552 CDS gi|387982075|gb|AJVH01000019.1| 25227 24478 -3 - 750 putative ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.553 CDS gi|387982075|gb|AJVH01000019.1| 25705 25490 -1 - 216 hypothetical protein - none -
fig|6666666.67444.peg.554 CDS gi|387982107|gb|AJVH01000017.1| 199 435 1 + 237 collagen-like repeat protein - none -
fig|6666666.67444.peg.555 CDS gi|387982107|gb|AJVH01000017.1| 1247 432 -2 - 816 Putative phage integrase - none -
fig|6666666.67444.peg.556 CDS gi|387982107|gb|AJVH01000017.1| 1940 1821 -2 - 120 hypothetical protein - none -
fig|6666666.67444.peg.557 CDS gi|387982107|gb|AJVH01000017.1| 2901 3338 3 + 438 hypothetical protein - none -
fig|6666666.67444.peg.558 CDS gi|387982107|gb|AJVH01000017.1| 3434 3736 2 + 303 Transposase - none -
fig|6666666.67444.peg.559 CDS gi|387982107|gb|AJVH01000017.1| 3855 4034 3 + 180 Transposase - none -
fig|6666666.67444.peg.560 CDS gi|387982107|gb|AJVH01000017.1| 4265 4807 2 + 543 Transposase - none -
fig|6666666.67444.peg.561 CDS gi|387982107|gb|AJVH01000017.1| 4963 4832 -1 - 132 Putative membrane protein - none -
fig|6666666.67444.peg.562 CDS gi|387982107|gb|AJVH01000017.1| 5148 5597 3 + 450 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67444.peg.563 CDS gi|387982107|gb|AJVH01000017.1| 5906 5601 -2 - 306 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.67444.peg.564 CDS gi|387982107|gb|AJVH01000017.1| 6194 5919 -2 - 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67444.peg.565 CDS gi|387982107|gb|AJVH01000017.1| 6283 6756 1 + 474 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67444.peg.566 CDS gi|387982107|gb|AJVH01000017.1| 6757 7401 1 + 645 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.567 CDS gi|387982107|gb|AJVH01000017.1| 7781 7398 -2 - 384 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.67444.peg.568 CDS gi|387982107|gb|AJVH01000017.1| 16749 7816 -3 - 8934 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67444.peg.569 CDS gi|387982107|gb|AJVH01000017.1| 17209 16928 -1 - 282 No significant database matches - none -
fig|6666666.67444.peg.570 CDS gi|387982107|gb|AJVH01000017.1| 17611 17982 1 + 372 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67444.peg.571 CDS gi|387982107|gb|AJVH01000017.1| 18010 18366 1 + 357 FIG00543835: hypothetical protein - none -
fig|6666666.67444.peg.572 CDS gi|387982107|gb|AJVH01000017.1| 18985 18335 -1 - 651 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67444.peg.573 CDS gi|387982107|gb|AJVH01000017.1| 19707 18982 -3 - 726 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67444.peg.574 CDS gi|387982107|gb|AJVH01000017.1| 20485 19718 -1 - 768 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67444.peg.575 CDS gi|387982107|gb|AJVH01000017.1| 21335 20538 -2 - 798 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.576 CDS gi|387982107|gb|AJVH01000017.1| 21904 21332 -1 - 573 FIG00545125: hypothetical protein - none -
fig|6666666.67444.peg.577 CDS gi|387982107|gb|AJVH01000017.1| 22833 21901 -3 - 933 possible hydrolase - none -
fig|6666666.67444.peg.578 CDS gi|387982107|gb|AJVH01000017.1| 23291 22833 -2 - 459 Transcriptional regulatory protein - none -
fig|6666666.67444.peg.579 CDS gi|387982107|gb|AJVH01000017.1| 23726 23385 -2 - 342 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67444.peg.580 CDS gi|387982107|gb|AJVH01000017.1| 23788 25101 1 + 1314 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.581 CDS gi|387982107|gb|AJVH01000017.1| 25133 27100 2 + 1968 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67444.peg.582 CDS gi|387982107|gb|AJVH01000017.1| 27102 27629 3 + 528 acetyltransferase (GNAT) family protein - none -
fig|6666666.67444.peg.583 CDS gi|387982137|gb|AJVH01000016.1| 1309 104 -1 - 1206 Putative membrane protein - none -
fig|6666666.67444.peg.584 CDS gi|387982137|gb|AJVH01000016.1| 1699 2745 1 + 1047 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.585 CDS gi|387982137|gb|AJVH01000016.1| 2757 3605 3 + 849 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.67444.peg.586 CDS gi|387982137|gb|AJVH01000016.1| 3624 4256 3 + 633 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67444.peg.587 CDS gi|387982137|gb|AJVH01000016.1| 4434 5264 3 + 831 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67444.peg.588 CDS gi|387982137|gb|AJVH01000016.1| 6434 5265 -2 - 1170 putative lipoprotein - none -
fig|6666666.67444.peg.589 CDS gi|387982137|gb|AJVH01000016.1| 7346 7630 2 + 285 No significant database matches - none -
fig|6666666.67444.peg.590 CDS gi|387982137|gb|AJVH01000016.1| 7623 7952 3 + 330 No significant database matches - none -
fig|6666666.67444.peg.591 CDS gi|387982137|gb|AJVH01000016.1| 8118 7924 -3 - 195 hypothetical protein - none -
fig|6666666.67444.peg.592 CDS gi|387982137|gb|AJVH01000016.1| 8150 8269 2 + 120 Putative membrane protein - none -
fig|6666666.67444.peg.593 CDS gi|387982137|gb|AJVH01000016.1| 8836 9237 1 + 402 No significant database matches - none -
fig|6666666.67444.peg.594 CDS gi|387982137|gb|AJVH01000016.1| 9581 9450 -2 - 132 hypothetical protein - none -
fig|6666666.67444.peg.595 CDS gi|387982137|gb|AJVH01000016.1| 9628 9948 1 + 321 hypothetical protein - none -
fig|6666666.67444.peg.596 CDS gi|387982137|gb|AJVH01000016.1| 9902 11347 2 + 1446 Putative phage terminase protein - none -
fig|6666666.67444.peg.597 CDS gi|387982137|gb|AJVH01000016.1| 12064 11501 -1 - 564 hypothetical protein - none -
fig|6666666.67444.peg.598 CDS gi|387982137|gb|AJVH01000016.1| 12027 12635 3 + 609 hypothetical protein - none -
fig|6666666.67444.peg.599 CDS gi|387982137|gb|AJVH01000016.1| 13246 13368 1 + 123 hypothetical protein - none -
fig|6666666.67444.peg.600 CDS gi|387982137|gb|AJVH01000016.1| 13349 13597 2 + 249 hypothetical protein - none -
fig|6666666.67444.peg.601 CDS gi|387982137|gb|AJVH01000016.1| 13590 14993 3 + 1404 Conserved hypothetical exported protein - none -
fig|6666666.67444.peg.602 CDS gi|387982137|gb|AJVH01000016.1| 15059 15304 2 + 246 No significant database matches - none -
fig|6666666.67444.peg.603 CDS gi|387982137|gb|AJVH01000016.1| 15340 15675 1 + 336 No significant database matches - none -
fig|6666666.67444.peg.604 CDS gi|387982137|gb|AJVH01000016.1| 15675 16097 3 + 423 hypothetical protein - none -
fig|6666666.67444.peg.605 CDS gi|387982137|gb|AJVH01000016.1| 16124 16513 2 + 390 Putative phage protein - none -
fig|6666666.67444.peg.606 CDS gi|387982137|gb|AJVH01000016.1| 16513 16824 1 + 312 Putative phage protein - none -
fig|6666666.67444.peg.607 CDS gi|387982137|gb|AJVH01000016.1| 16902 18467 3 + 1566 Putative phage protein - none -
fig|6666666.67444.peg.608 CDS gi|387982137|gb|AJVH01000016.1| 18461 19648 2 + 1188 No significant database matches - none -
fig|6666666.67444.peg.609 CDS gi|387982167|gb|AJVH01000015.1| 1610 96 -2 - 1515 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67444.peg.610 CDS gi|387982167|gb|AJVH01000015.1| 5245 1685 -1 - 3561 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.67444.peg.611 CDS gi|387982167|gb|AJVH01000015.1| 8835 5350 -3 - 3486 Chromosome partition protein smc - none -
fig|6666666.67444.peg.612 CDS gi|387982167|gb|AJVH01000015.1| 9147 8860 -3 - 288 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67444.peg.613 CDS gi|387982167|gb|AJVH01000015.1| 10613 9147 -2 - 1467 amino acid carrier protein - none -
fig|6666666.67444.peg.614 CDS gi|387982167|gb|AJVH01000015.1| 11603 10713 -2 - 891 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67444.peg.615 CDS gi|387982167|gb|AJVH01000015.1| 12370 11621 -1 - 750 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67444.peg.616 CDS gi|387982167|gb|AJVH01000015.1| 12897 12367 -3 - 531 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67444.peg.617 CDS gi|387982167|gb|AJVH01000015.1| 13660 12938 -1 - 723 Cell division initiation protein - none -
fig|6666666.67444.peg.618 CDS gi|387982167|gb|AJVH01000015.1| 15168 13822 -3 - 1347 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67444.peg.619 CDS gi|387982167|gb|AJVH01000015.1| 15585 16751 3 + 1167 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67444.peg.620 CDS gi|387982167|gb|AJVH01000015.1| 17149 16721 -1 - 429 FIG00544156: hypothetical protein - none -
fig|6666666.67444.peg.621 CDS gi|387982167|gb|AJVH01000015.1| 17193 18509 3 + 1317 No significant database matches - none -
fig|6666666.67444.peg.622 CDS gi|387982167|gb|AJVH01000015.1| 18553 19857 1 + 1305 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67444.peg.623 CDS gi|387982167|gb|AJVH01000015.1| 19980 22409 3 + 2430 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.624 CDS gi|387982167|gb|AJVH01000015.1| 23896 22475 -1 - 1422 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67444.peg.625 CDS gi|387982167|gb|AJVH01000015.1| 24957 24106 -3 - 852 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67444.peg.626 CDS gi|387982167|gb|AJVH01000015.1| 25835 25029 -2 - 807 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67444.peg.627 CDS gi|387982167|gb|AJVH01000015.1| 26582 25923 -2 - 660 FIG00545012: hypothetical protein - none -
fig|6666666.67444.peg.628 CDS gi|387982167|gb|AJVH01000015.1| 26979 26629 -3 - 351 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis;
Zinc regulated enzymes
fig|6666666.67444.peg.629 CDS gi|387982167|gb|AJVH01000015.1| 27777 27001 -3 - 777 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67444.peg.630 CDS gi|387982167|gb|AJVH01000015.1| 28653 27868 -3 - 786 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67444.peg.631 CDS gi|387982167|gb|AJVH01000015.1| 29405 28650 -2 - 756 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.67444.peg.632 CDS gi|387982167|gb|AJVH01000015.1| 30108 29476 -3 - 633 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67444.peg.633 CDS gi|387982167|gb|AJVH01000015.1| 31587 30175 -3 - 1413 putative transport protein - none -
fig|6666666.67444.peg.634 CDS gi|387982167|gb|AJVH01000015.1| 31971 31756 -3 - 216 FIG00544135: hypothetical protein - none -
fig|6666666.67444.peg.635 CDS gi|387982167|gb|AJVH01000015.1| 32582 31974 -2 - 609 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67444.peg.636 CDS gi|387982167|gb|AJVH01000015.1| 33764 32664 -2 - 1101 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67444.peg.637 CDS gi|387982167|gb|AJVH01000015.1| 35134 33803 -1 - 1332 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67444.peg.638 CDS gi|387982167|gb|AJVH01000015.1| 35477 36532 2 + 1056 FIG00545612: hypothetical protein - none -
fig|6666666.67444.peg.639 CDS gi|387982167|gb|AJVH01000015.1| 37096 36536 -1 - 561 hypothetical membrane protein - none -
fig|6666666.67444.peg.640 CDS gi|387982167|gb|AJVH01000015.1| 37933 37271 -1 - 663 FIG00545144: hypothetical protein - none -
fig|6666666.67444.peg.641 CDS gi|387982167|gb|AJVH01000015.1| 38158 38703 1 + 546 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.67444.peg.642 CDS gi|387982167|gb|AJVH01000015.1| 38725 40932 1 + 2208 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67444.peg.643 CDS gi|387982167|gb|AJVH01000015.1| 41068 42414 1 + 1347 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67444.peg.644 CDS gi|387982167|gb|AJVH01000015.1| 42549 43166 3 + 618 FIG00548980: hypothetical protein - none -
fig|6666666.67444.peg.645 CDS gi|387982167|gb|AJVH01000015.1| 43250 44269 2 + 1020 FIG00544169: hypothetical protein - none -
fig|6666666.67444.peg.646 CDS gi|387982167|gb|AJVH01000015.1| 44322 44447 3 + 126 FIG00544735: hypothetical protein - none -
fig|6666666.67444.peg.647 CDS gi|387982167|gb|AJVH01000015.1| 44910 44533 -3 - 378 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67444.peg.648 CDS gi|387982167|gb|AJVH01000015.1| 45146 44916 -2 - 231 FIG00544856: hypothetical protein - none -
fig|6666666.67444.peg.649 CDS gi|387982167|gb|AJVH01000015.1| 45813 45172 -3 - 642 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.67444.peg.650 CDS gi|387982167|gb|AJVH01000015.1| 47135 45837 -2 - 1299 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67444.peg.651 CDS gi|387982167|gb|AJVH01000015.1| 50786 47178 -2 - 3609 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67444.peg.652 CDS gi|387982167|gb|AJVH01000015.1| 50882 51760 2 + 879 Protein rarD - none -
fig|6666666.67444.peg.653 CDS gi|387982167|gb|AJVH01000015.1| 52279 51734 -1 - 546 FIG00544566: hypothetical protein - none -
fig|6666666.67444.peg.654 CDS gi|387982167|gb|AJVH01000015.1| 53213 52287 -2 - 927 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67444.peg.655 CDS gi|387982167|gb|AJVH01000015.1| 53665 53210 -1 - 456 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67444.peg.656 CDS gi|387982167|gb|AJVH01000015.1| 53795 54760 2 + 966 FIG00544955: hypothetical protein - none -
fig|6666666.67444.peg.657 CDS gi|387982167|gb|AJVH01000015.1| 55470 54850 -3 - 621 Putative secreted protein - none -
fig|6666666.67444.peg.658 CDS gi|387982167|gb|AJVH01000015.1| 55647 56588 3 + 942 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67444.peg.659 CDS gi|387982167|gb|AJVH01000015.1| 57917 56589 -2 - 1329 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67444.peg.660 CDS gi|387982167|gb|AJVH01000015.1| 61228 58070 -1 - 3159 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67444.peg.661 CDS gi|387982167|gb|AJVH01000015.1| 62627 61626 -2 - 1002 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67444.peg.662 CDS gi|387982167|gb|AJVH01000015.1| 63132 62968 -3 - 165 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67444.peg.663 CDS gi|387982167|gb|AJVH01000015.1| 63422 63240 -2 - 183 hypothetical protein - none -
fig|6666666.67444.peg.664 CDS gi|387982167|gb|AJVH01000015.1| 63901 63452 -1 - 450 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67444.peg.665 CDS gi|387982167|gb|AJVH01000015.1| 64648 63995 -1 - 654 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67444.peg.666 CDS gi|387982167|gb|AJVH01000015.1| 65985 64750 -3 - 1236 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67444.peg.667 CDS gi|387982167|gb|AJVH01000015.1| 67033 66377 -1 - 657 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67444.peg.668 CDS gi|387982167|gb|AJVH01000015.1| 68433 67030 -3 - 1404 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67444.peg.669 CDS gi|387982167|gb|AJVH01000015.1| 69560 68481 -2 - 1080 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67444.peg.670 CDS gi|387982167|gb|AJVH01000015.1| 71070 69562 -3 - 1509 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67444.peg.671 CDS gi|387982167|gb|AJVH01000015.1| 72539 71097 -2 - 1443 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67444.peg.672 CDS gi|387982167|gb|AJVH01000015.1| 73491 72544 -3 - 948 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67444.peg.673 CDS gi|387982167|gb|AJVH01000015.1| 75161 73671 -2 - 1491 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67444.peg.674 CDS gi|387982167|gb|AJVH01000015.1| 76756 75215 -1 - 1542 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67444.peg.675 CDS gi|387982167|gb|AJVH01000015.1| 78240 76864 -3 - 1377 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.676 CDS gi|387982167|gb|AJVH01000015.1| 78887 78288 -2 - 600 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.677 CDS gi|387982167|gb|AJVH01000015.1| 79691 78918 -2 - 774 FIG00544004: hypothetical protein - none -
fig|6666666.67444.peg.678 CDS gi|387982167|gb|AJVH01000015.1| 80767 79748 -1 - 1020 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67444.peg.679 CDS gi|387982167|gb|AJVH01000015.1| 81381 80950 -3 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67444.peg.680 CDS gi|387982167|gb|AJVH01000015.1| 82321 81929 -1 - 393 FIG017342: transmembrane protein - none -
fig|6666666.67444.peg.681 CDS gi|387982167|gb|AJVH01000015.1| 82873 82442 -1 - 432 FIG00544752: hypothetical protein - none -
fig|6666666.67444.peg.682 CDS gi|387982167|gb|AJVH01000015.1| 83063 83638 2 + 576 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67444.peg.683 CDS gi|387982167|gb|AJVH01000015.1| 84618 83635 -3 - 984 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67444.peg.684 CDS gi|387982167|gb|AJVH01000015.1| 84823 85947 1 + 1125 Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67444.peg.685 CDS gi|387982167|gb|AJVH01000015.1| 85969 87456 1 + 1488 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67444.peg.686 CDS gi|387982167|gb|AJVH01000015.1| 87825 87457 -3 - 369 Conserved hypothetical regulatory protein - none -
fig|6666666.67444.peg.687 CDS gi|387982167|gb|AJVH01000015.1| 87928 90120 1 + 2193 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67444.peg.688 CDS gi|387982167|gb|AJVH01000015.1| 91576 90188 -1 - 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67444.peg.689 CDS gi|387982167|gb|AJVH01000015.1| 92199 91690 -3 - 510 FIG00544385: hypothetical protein - none -
fig|6666666.67444.peg.690 CDS gi|387982167|gb|AJVH01000015.1| 92991 92266 -3 - 726 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.691 CDS gi|387982167|gb|AJVH01000015.1| 93996 93043 -3 - 954 ROK family protein (putative glucokinase) - none -
fig|6666666.67444.peg.692 CDS gi|387982167|gb|AJVH01000015.1| 95218 94127 -1 - 1092 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67444.peg.693 CDS gi|387982167|gb|AJVH01000015.1| 96309 95281 -3 - 1029 NLP/P60 family protein - none -
fig|6666666.67444.peg.694 CDS gi|387982167|gb|AJVH01000015.1| 97075 96464 -1 - 612 putative secreted protein - none -
fig|6666666.67444.peg.695 CDS gi|387982167|gb|AJVH01000015.1| 97468 97337 -1 - 132 Putative membrane protein - none -
fig|6666666.67444.peg.696 CDS gi|387982167|gb|AJVH01000015.1| 99480 97858 -3 - 1623 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67444.peg.697 CDS gi|387982167|gb|AJVH01000015.1| 100679 99477 -2 - 1203 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67444.peg.698 CDS gi|387982167|gb|AJVH01000015.1| 101587 100694 -1 - 894 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67444.peg.699 CDS gi|387982167|gb|AJVH01000015.1| 102263 101673 -2 - 591 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67444.peg.700 CDS gi|387982167|gb|AJVH01000015.1| 103260 102829 -3 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67444.peg.701 CDS gi|387982167|gb|AJVH01000015.1| 104372 103284 -2 - 1089 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67444.peg.702 CDS gi|387982167|gb|AJVH01000015.1| 104799 106721 3 + 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67444.peg.703 CDS gi|387982167|gb|AJVH01000015.1| 107158 106814 -1 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67444.peg.704 CDS gi|387982167|gb|AJVH01000015.1| 107377 108051 1 + 675 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67444.peg.705 CDS gi|387982167|gb|AJVH01000015.1| 108052 108600 1 + 549 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis
fig|6666666.67444.peg.706 CDS gi|387982167|gb|AJVH01000015.1| 108649 109719 1 + 1071 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis
fig|6666666.67444.peg.707 CDS gi|387982167|gb|AJVH01000015.1| 109727 110551 2 + 825 Cobalamin synthase - none -
fig|6666666.67444.peg.708 CDS gi|387982167|gb|AJVH01000015.1| 111743 110628 -2 - 1116 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67444.peg.709 CDS gi|387982167|gb|AJVH01000015.1| 111844 113346 1 + 1503 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67444.peg.710 CDS gi|387982167|gb|AJVH01000015.1| 113827 113405 -1 - 423 Putative oxidoreductase - none -
fig|6666666.67444.peg.711 CDS gi|387982167|gb|AJVH01000015.1| 113932 114366 1 + 435 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67444.peg.712 CDS gi|387982167|gb|AJVH01000015.1| 114482 115546 2 + 1065 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67444.peg.713 CDS gi|387982167|gb|AJVH01000015.1| 115662 116414 3 + 753 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67444.peg.714 CDS gi|387982167|gb|AJVH01000015.1| 116533 117555 1 + 1023 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67444.peg.715 CDS gi|387982167|gb|AJVH01000015.1| 117618 118391 3 + 774 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67444.peg.716 CDS gi|387982167|gb|AJVH01000015.1| 118911 118438 -3 - 474 FIG00543905: hypothetical protein - none -
fig|6666666.67444.peg.717 CDS gi|387982167|gb|AJVH01000015.1| 119108 120544 2 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.718 CDS gi|387982167|gb|AJVH01000015.1| 121494 120601 -3 - 894 Putative exported protein - none -
fig|6666666.67444.peg.719 CDS gi|387982167|gb|AJVH01000015.1| 122126 121917 -2 - 210 hypothetical protein - none -
fig|6666666.67444.peg.720 CDS gi|387982167|gb|AJVH01000015.1| 123591 122239 -3 - 1353 Histidine permease YuiF - none -
fig|6666666.67444.peg.721 CDS gi|387982167|gb|AJVH01000015.1| 123723 124406 3 + 684 Transcriptional regulator, GntR family - none -
fig|6666666.67444.peg.722 CDS gi|387982167|gb|AJVH01000015.1| 124428 125558 3 + 1131 FIG00547823: hypothetical protein - none -
fig|6666666.67444.peg.723 CDS gi|387982167|gb|AJVH01000015.1| 125540 125686 2 + 147 FIG00547823: hypothetical protein - none -
fig|6666666.67444.peg.724 CDS gi|387982167|gb|AJVH01000015.1| 126219 125683 -3 - 537 FIG00547029: hypothetical protein - none -
fig|6666666.67444.peg.725 CDS gi|387982167|gb|AJVH01000015.1| 126396 126250 -3 - 147 hypothetical protein - none -
fig|6666666.67444.peg.726 CDS gi|387982167|gb|AJVH01000015.1| 127947 126499 -3 - 1449 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67444.peg.727 CDS gi|387982167|gb|AJVH01000015.1| 128117 128911 2 + 795 putative secreted protein - none -
fig|6666666.67444.peg.728 CDS gi|387982167|gb|AJVH01000015.1| 129159 128908 -3 - 252 FIG00544676: hypothetical protein - none -
fig|6666666.67444.peg.729 CDS gi|387982167|gb|AJVH01000015.1| 129893 129246 -2 - 648 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.730 CDS gi|387982167|gb|AJVH01000015.1| 133197 130033 -3 - 3165 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) CBSS-316057.3.peg.3521
fig|6666666.67444.peg.731 CDS gi|387982167|gb|AJVH01000015.1| 134588 133248 -2 - 1341 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.732 CDS gi|387982167|gb|AJVH01000015.1| 134731 136305 1 + 1575 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.67444.peg.733 CDS gi|387982167|gb|AJVH01000015.1| 136506 136315 -3 - 192 FIG00544054: hypothetical protein - none -
fig|6666666.67444.peg.734 CDS gi|387982167|gb|AJVH01000015.1| 136674 137906 3 + 1233 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67444.peg.735 CDS gi|387982167|gb|AJVH01000015.1| 138257 138409 2 + 153 hypothetical protein - none -
fig|6666666.67444.peg.736 CDS gi|387982167|gb|AJVH01000015.1| 138704 138513 -2 - 192 hypothetical protein - none -
fig|6666666.67444.peg.737 CDS gi|387982167|gb|AJVH01000015.1| 139097 138876 -2 - 222 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.67444.peg.738 CDS gi|387982167|gb|AJVH01000015.1| 139062 139193 3 + 132 hypothetical protein - none -
fig|6666666.67444.peg.739 CDS gi|387982167|gb|AJVH01000015.1| 139905 139285 -3 - 621 hypothetical membrane protein - none -
fig|6666666.67444.peg.740 CDS gi|387982167|gb|AJVH01000015.1| 140034 140156 3 + 123 hypothetical protein - none -
fig|6666666.67444.peg.741 CDS gi|387982167|gb|AJVH01000015.1| 140601 140443 -3 - 159 hypothetical protein - none -
fig|6666666.67444.peg.742 CDS gi|387982167|gb|AJVH01000015.1| 141743 140610 -2 - 1134 FIG006762: Phosphoglycerate mutase family - none -
fig|6666666.67444.peg.743 CDS gi|387982167|gb|AJVH01000015.1| 142459 141743 -1 - 717 FIG137478: Hypothetical protein - none -
fig|6666666.67444.peg.744 CDS gi|387982167|gb|AJVH01000015.1| 143675 142539 -2 - 1137 UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain - none -
fig|6666666.67444.peg.745 CDS gi|387982167|gb|AJVH01000015.1| 144712 143678 -1 - 1035 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis
fig|6666666.67444.peg.746 CDS gi|387982167|gb|AJVH01000015.1| 144743 145387 2 + 645 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.67444.peg.747 CDS gi|387982167|gb|AJVH01000015.1| 145371 145871 3 + 501 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.67444.peg.748 CDS gi|387982167|gb|AJVH01000015.1| 145864 146733 1 + 870 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67444.peg.749 CDS gi|387982167|gb|AJVH01000015.1| 147629 146727 -2 - 903 Adenosylcobinamide-phosphate synthase - none -
fig|6666666.67444.peg.750 CDS gi|387982167|gb|AJVH01000015.1| 148295 147858 -2 - 438 FIG00544601: hypothetical protein - none -
fig|6666666.67444.peg.751 CDS gi|387982167|gb|AJVH01000015.1| 148516 151251 1 + 2736 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67444.peg.752 CDS gi|387982167|gb|AJVH01000015.1| 151447 152010 1 + 564 Putative secreted protein - none -
fig|6666666.67444.peg.753 CDS gi|387982167|gb|AJVH01000015.1| 154039 152039 -1 - 2001 FIG00548710: hypothetical protein - none -
fig|6666666.67444.peg.754 CDS gi|387982167|gb|AJVH01000015.1| 154467 155696 3 + 1230 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67444.peg.755 CDS gi|387982167|gb|AJVH01000015.1| 156673 156960 1 + 288 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.756 CDS gi|387982167|gb|AJVH01000015.1| 156997 157806 1 + 810 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.67444.peg.757 CDS gi|387982167|gb|AJVH01000015.1| 158099 157803 -2 - 297 FIG00544844: hypothetical protein - none -
fig|6666666.67444.peg.758 CDS gi|387982167|gb|AJVH01000015.1| 159091 158270 -1 - 822 beta-lactamase class C - none -
fig|6666666.67444.peg.759 CDS gi|387982167|gb|AJVH01000015.1| 159858 159088 -3 - 771 FIG00544992: hypothetical protein - none -
fig|6666666.67444.peg.760 CDS gi|387982167|gb|AJVH01000015.1| 160384 160626 1 + 243 FIG00547159: hypothetical protein - none -
fig|6666666.67444.peg.761 CDS gi|387982167|gb|AJVH01000015.1| 160717 161274 1 + 558 Putative thiamine biosynthesis related protein - none -
fig|6666666.67444.peg.762 CDS gi|387982167|gb|AJVH01000015.1| 162708 161323 -3 - 1386 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.67444.peg.763 CDS gi|387982167|gb|AJVH01000015.1| 163222 162740 -1 - 483 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.67444.peg.764 CDS gi|387982167|gb|AJVH01000015.1| 165110 163233 -2 - 1878 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67444.peg.765 CDS gi|387982167|gb|AJVH01000015.1| 165201 165623 3 + 423 putative ribonuclease - none -
fig|6666666.67444.peg.766 CDS gi|387982167|gb|AJVH01000015.1| 165613 165852 1 + 240 FIG00546281: hypothetical protein - none -
fig|6666666.67444.peg.767 CDS gi|387982167|gb|AJVH01000015.1| 167113 165842 -1 - 1272 dNTP triphosphohydrolase, broad substrate specificity, subgroup 2 Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.67444.peg.768 CDS gi|387982167|gb|AJVH01000015.1| 167791 167120 -1 - 672 Putative secreted protein - none -
fig|6666666.67444.peg.769 CDS gi|387982167|gb|AJVH01000015.1| 167881 169860 1 + 1980 FIG00543878: hypothetical protein - none -
fig|6666666.67444.peg.770 CDS gi|387982167|gb|AJVH01000015.1| 170069 169857 -2 - 213 FIG00545596: hypothetical protein - none -
fig|6666666.67444.peg.771 CDS gi|387982167|gb|AJVH01000015.1| 170788 170261 -1 - 528 FIG00544046: hypothetical protein - none -
fig|6666666.67444.peg.772 CDS gi|387982167|gb|AJVH01000015.1| 172199 170814 -2 - 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67444.peg.773 CDS gi|387982167|gb|AJVH01000015.1| 172510 172887 1 + 378 putative transcription regulator - none -
fig|6666666.67444.peg.774 CDS gi|387982167|gb|AJVH01000015.1| 173064 173492 3 + 429 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.67444.peg.775 CDS gi|387982167|gb|AJVH01000015.1| 174572 173499 -2 - 1074 FIG00544679: hypothetical protein - none -
fig|6666666.67444.peg.776 CDS gi|387982167|gb|AJVH01000015.1| 175306 174569 -1 - 738 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67444.peg.777 CDS gi|387982167|gb|AJVH01000015.1| 176021 175326 -2 - 696 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67444.peg.778 CDS gi|387982167|gb|AJVH01000015.1| 176971 176054 -1 - 918 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.67444.peg.779 CDS gi|387982167|gb|AJVH01000015.1| 177875 177024 -2 - 852 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67444.peg.780 CDS gi|387982167|gb|AJVH01000015.1| 179214 177886 -3 - 1329 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67444.peg.781 CDS gi|387982167|gb|AJVH01000015.1| 179801 179211 -2 - 591 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67444.peg.782 CDS gi|387982167|gb|AJVH01000015.1| 180770 179802 -2 - 969 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67444.peg.783 CDS gi|387982167|gb|AJVH01000015.1| 181576 180818 -1 - 759 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67444.peg.784 CDS gi|387982167|gb|AJVH01000015.1| 182705 181578 -2 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67444.peg.785 CDS gi|387982167|gb|AJVH01000015.1| 183816 182779 -3 - 1038 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67444.peg.786 CDS gi|387982167|gb|AJVH01000015.1| 184989 183856 -3 - 1134 Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.787 CDS gi|387982167|gb|AJVH01000015.1| 185650 184979 -1 - 672 FIG00543880: hypothetical protein - none -
fig|6666666.67444.peg.788 CDS gi|387982167|gb|AJVH01000015.1| 187688 185859 -2 - 1830 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.789 CDS gi|387982167|gb|AJVH01000015.1| 187866 189953 3 + 2088 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.790 CDS gi|387982167|gb|AJVH01000015.1| 190300 190100 -1 - 201 FIG00545915: hypothetical protein - none -
fig|6666666.67444.peg.791 CDS gi|387982167|gb|AJVH01000015.1| 192309 190300 -3 - 2010 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67444.peg.792 CDS gi|387982167|gb|AJVH01000015.1| 192308 193507 2 + 1200 FIG00547479: hypothetical protein - none -
fig|6666666.67444.peg.793 CDS gi|387982167|gb|AJVH01000015.1| 194045 193494 -2 - 552 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.67444.peg.794 CDS gi|387982167|gb|AJVH01000015.1| 195638 194064 -2 - 1575 FIG00546957: hypothetical protein - none -
fig|6666666.67444.peg.795 CDS gi|387982167|gb|AJVH01000015.1| 196256 195639 -2 - 618 FIG00547918: hypothetical protein - none -
fig|6666666.67444.peg.796 CDS gi|387982167|gb|AJVH01000015.1| 197636 196479 -2 - 1158 No significant database matches - none -
fig|6666666.67444.peg.797 CDS gi|387982167|gb|AJVH01000015.1| 198332 197817 -2 - 516 FIG00545146: hypothetical protein - none -
fig|6666666.67444.peg.798 CDS gi|387982167|gb|AJVH01000015.1| 198445 200292 1 + 1848 putative ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.799 CDS gi|387982167|gb|AJVH01000015.1| 200311 201441 1 + 1131 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.67444.peg.800 CDS gi|387982167|gb|AJVH01000015.1| 201522 202826 3 + 1305 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67444.peg.801 CDS gi|387982167|gb|AJVH01000015.1| 202836 203789 3 + 954 FIG00546389: hypothetical protein - none -
fig|6666666.67444.peg.802 CDS gi|387982167|gb|AJVH01000015.1| 205497 203767 -3 - 1731 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.67444.peg.803 CDS gi|387982167|gb|AJVH01000015.1| 205782 207275 3 + 1494 putative ABC transporter substrate-binding protein - none -
fig|6666666.67444.peg.804 CDS gi|387982167|gb|AJVH01000015.1| 207282 208229 3 + 948 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67444.peg.805 CDS gi|387982167|gb|AJVH01000015.1| 208233 209054 3 + 822 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67444.peg.806 CDS gi|387982167|gb|AJVH01000015.1| 209051 210493 2 + 1443 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67444.peg.807 CDS gi|387982167|gb|AJVH01000015.1| 210618 210490 -3 - 129 hypothetical protein - none -
fig|6666666.67444.peg.808 CDS gi|387982167|gb|AJVH01000015.1| 211742 210636 -2 - 1107 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.67444.peg.809 CDS gi|387982167|gb|AJVH01000015.1| 211869 212516 3 + 648 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67444.peg.810 CDS gi|387982167|gb|AJVH01000015.1| 212513 213901 2 + 1389 Putative xylulose kinase - none -
fig|6666666.67444.peg.811 CDS gi|387982167|gb|AJVH01000015.1| 214285 214443 1 + 159 hypothetical protein - none -
fig|6666666.67444.peg.812 CDS gi|387982167|gb|AJVH01000015.1| 214453 216066 1 + 1614 Putative pyridine nucleotide-disulphide oxidoreductase - none -
fig|6666666.67444.peg.813 CDS gi|387982167|gb|AJVH01000015.1| 216078 216335 3 + 258 hypothetical protein - none -
fig|6666666.67444.peg.814 CDS gi|387982167|gb|AJVH01000015.1| 217877 216321 -2 - 1557 putative Glutathione-regulated potassium-efflux system protein KefB Potassium homeostasis
fig|6666666.67444.peg.815 CDS gi|387982167|gb|AJVH01000015.1| 218028 219431 3 + 1404 putative transport protein - none -
fig|6666666.67444.peg.816 CDS gi|387982167|gb|AJVH01000015.1| 219428 220366 2 + 939 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.817 CDS gi|387982167|gb|AJVH01000015.1| 220372 221178 1 + 807 Putative membrane protein - none -
fig|6666666.67444.peg.818 CDS gi|387982167|gb|AJVH01000015.1| 221215 221874 1 + 660 hypothetical membrane protein - none -
fig|6666666.67444.peg.819 CDS gi|387982167|gb|AJVH01000015.1| 222021 224807 3 + 2787 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67444.peg.820 CDS gi|387982167|gb|AJVH01000015.1| 224804 225724 2 + 921 Mrr restriction system protein - none -
fig|6666666.67444.peg.821 CDS gi|387982167|gb|AJVH01000015.1| 225884 225771 -2 - 114 Doubtful CDS. No significant database matches - none -
fig|6666666.67444.peg.822 CDS gi|387982167|gb|AJVH01000015.1| 227014 226205 -1 - 810 Abortive infection bacteriophage resistance protein - none -
fig|6666666.67444.peg.823 CDS gi|387982167|gb|AJVH01000015.1| 229189 227342 -1 - 1848 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67444.peg.824 CDS gi|387982167|gb|AJVH01000015.1| 229321 229485 1 + 165 hypothetical protein - none -
fig|6666666.67444.peg.825 CDS gi|387982167|gb|AJVH01000015.1| 229779 229591 -3 - 189 hypothetical protein - none -
fig|6666666.67444.peg.826 CDS gi|387982167|gb|AJVH01000015.1| 229741 230049 1 + 309 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67444.peg.827 CDS gi|387982167|gb|AJVH01000015.1| 230210 230473 2 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.67444.peg.828 CDS gi|387982167|gb|AJVH01000015.1| 231160 230522 -1 - 639 L-lysine permease - none -
fig|6666666.67444.peg.829 CDS gi|387982167|gb|AJVH01000015.1| 231551 231150 -2 - 402 ankyrin repeat containing protein - none -
fig|6666666.67444.peg.830 CDS gi|387982167|gb|AJVH01000015.1| 232515 231562 -3 - 954 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67444.peg.831 CDS gi|387982167|gb|AJVH01000015.1| 234118 232490 -1 - 1629 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.67444.peg.832 CDS gi|387982167|gb|AJVH01000015.1| 234786 234163 -3 - 624 FIG00545717: hypothetical protein - none -
fig|6666666.67444.peg.833 CDS gi|387982167|gb|AJVH01000015.1| 235726 234905 -1 - 822 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67444.peg.834 CDS gi|387982167|gb|AJVH01000015.1| 236453 235731 -2 - 723 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67444.peg.835 CDS gi|387982167|gb|AJVH01000015.1| 236927 236460 -2 - 468 Iojap protein - none -
fig|6666666.67444.peg.836 CDS gi|387982167|gb|AJVH01000015.1| 237636 236950 -3 - 687 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.837 CDS gi|387982167|gb|AJVH01000015.1| 238952 237660 -2 - 1293 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67444.peg.838 CDS gi|387982167|gb|AJVH01000015.1| 240100 238970 -1 - 1131 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.67444.peg.839 CDS gi|387982167|gb|AJVH01000015.1| 240372 240121 -3 - 252 Putative membrane protein - none -
fig|6666666.67444.peg.840 CDS gi|387982167|gb|AJVH01000015.1| 241902 240376 -3 - 1527 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.67444.peg.841 CDS gi|387982167|gb|AJVH01000015.1| 242329 242063 -1 - 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67444.peg.842 CDS gi|387982167|gb|AJVH01000015.1| 242675 242370 -2 - 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67444.peg.843 CDS gi|387982167|gb|AJVH01000015.1| 245738 242850 -2 - 2889 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.67444.peg.844 CDS gi|387982167|gb|AJVH01000015.1| 246429 246019 -3 - 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.67444.peg.845 CDS gi|387982167|gb|AJVH01000015.1| 247034 246621 -2 - 414 Possible membrane protein - none -
fig|6666666.67444.peg.846 CDS gi|387982167|gb|AJVH01000015.1| 248527 247031 -1 - 1497 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67444.peg.847 CDS gi|387982167|gb|AJVH01000015.1| 251232 248524 -3 - 2709 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67444.peg.848 CDS gi|387982167|gb|AJVH01000015.1| 252307 251327 -1 - 981 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67444.peg.849 CDS gi|387982167|gb|AJVH01000015.1| 252790 253542 1 + 753 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.850 CDS gi|387982167|gb|AJVH01000015.1| 254870 253578 -2 - 1293 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67444.peg.851 CDS gi|387982167|gb|AJVH01000015.1| 257548 255017 -1 - 2532 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) # PabAa Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67444.peg.852 CDS gi|387982167|gb|AJVH01000015.1| 258266 257637 -2 - 630 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67444.peg.853 CDS gi|387982167|gb|AJVH01000015.1| 258883 258284 -1 - 600 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67444.peg.854 CDS gi|387982167|gb|AJVH01000015.1| 260395 259049 -1 - 1347 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67444.peg.855 CDS gi|387982167|gb|AJVH01000015.1| 261221 261457 2 + 237 FIG00544802: hypothetical protein - none -
fig|6666666.67444.peg.856 CDS gi|387982167|gb|AJVH01000015.1| 261605 261489 -2 - 117 hypothetical protein - none -
fig|6666666.67444.peg.857 CDS gi|387982167|gb|AJVH01000015.1| 261604 262386 1 + 783 FIG00997919: hypothetical protein - none -
fig|6666666.67444.peg.858 CDS gi|387982167|gb|AJVH01000015.1| 262897 262463 -1 - 435 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.67444.peg.859 CDS gi|387982167|gb|AJVH01000015.1| 263588 262968 -2 - 621 FIG00544229: hypothetical protein - none -
fig|6666666.67444.peg.860 CDS gi|387982167|gb|AJVH01000015.1| 263710 266328 1 + 2619 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67444.peg.861 CDS gi|387982167|gb|AJVH01000015.1| 266584 267600 1 + 1017 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67444.peg.862 CDS gi|387982167|gb|AJVH01000015.1| 268628 268008 -2 - 621 FIG00545013: hypothetical protein - none -
fig|6666666.67444.peg.863 CDS gi|387982167|gb|AJVH01000015.1| 269081 268638 -2 - 444 FIG00544139: hypothetical protein - none -
fig|6666666.67444.peg.864 CDS gi|387982167|gb|AJVH01000015.1| 270878 269208 -2 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.865 CDS gi|387982167|gb|AJVH01000015.1| 271464 270976 -3 - 489 Putative single-strand binding protein - none -
fig|6666666.67444.peg.866 CDS gi|387982167|gb|AJVH01000015.1| 273683 271647 -2 - 2037 Copper resistance protein D Copper homeostasis
fig|6666666.67444.peg.867 CDS gi|387982167|gb|AJVH01000015.1| 273910 276195 1 + 2286 Carbon starvation protein A Carbon Starvation
fig|6666666.67444.peg.868 CDS gi|387982167|gb|AJVH01000015.1| 276216 276416 3 + 201 hypothetical protein - none -
fig|6666666.67444.peg.869 CDS gi|387982419|gb|AJVH01000014.1| 1064 177 -2 - 888 Putative membrane protein - none -
fig|6666666.67444.peg.870 CDS gi|387982419|gb|AJVH01000014.1| 3591 1282 -3 - 2310 Putative membrane protein - none -
fig|6666666.67444.peg.871 CDS gi|387982419|gb|AJVH01000014.1| 4255 4034 -1 - 222 Putative secreted protein - none -
fig|6666666.67444.peg.872 CDS gi|387982419|gb|AJVH01000014.1| 5042 5155 2 + 114 hypothetical protein - none -
fig|6666666.67444.peg.873 CDS gi|387982419|gb|AJVH01000014.1| 5518 5177 -1 - 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67444.peg.874 CDS gi|387982419|gb|AJVH01000014.1| 7968 5692 -3 - 2277 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67444.peg.875 CDS gi|387982419|gb|AJVH01000014.1| 8119 7994 -1 - 126 FIG00545499: hypothetical protein - none -
fig|6666666.67444.peg.876 CDS gi|387982419|gb|AJVH01000014.1| 9054 8176 -3 - 879 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67444.peg.877 CDS gi|387982419|gb|AJVH01000014.1| 9545 9054 -2 - 492 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.67444.peg.878 CDS gi|387982419|gb|AJVH01000014.1| 10156 9683 -1 - 474 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.67444.peg.879 CDS gi|387982419|gb|AJVH01000014.1| 12005 10374 -2 - 1632 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67444.peg.880 CDS gi|387982419|gb|AJVH01000014.1| 14268 12115 -3 - 2154 [Protein-PII] uridylyltransferase (EC 2.7.7.59) CBSS-312309.3.peg.1965
fig|6666666.67444.peg.881 CDS gi|387982419|gb|AJVH01000014.1| 14618 14280 -2 - 339 Nitrogen regulatory protein P-II - none -
fig|6666666.67444.peg.882 CDS gi|387982419|gb|AJVH01000014.1| 15544 14696 -1 - 849 Ammonium transporter - none -
fig|6666666.67444.peg.883 CDS gi|387982435|gb|AJVH01000013.1| 121 1197 1 + 1077 TPR-repeat-containing protein - none -
fig|6666666.67444.peg.884 CDS gi|387982435|gb|AJVH01000013.1| 1247 2230 2 + 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67444.peg.885 CDS gi|387982435|gb|AJVH01000013.1| 2248 2409 1 + 162 FIG00545954: hypothetical protein - none -
fig|6666666.67444.peg.886 CDS gi|387982435|gb|AJVH01000013.1| 2451 3272 3 + 822 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67444.peg.887 CDS gi|387982435|gb|AJVH01000013.1| 3272 4210 2 + 939 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67444.peg.888 CDS gi|387982435|gb|AJVH01000013.1| 4327 6081 1 + 1755 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67444.peg.889 CDS gi|387982435|gb|AJVH01000013.1| 6180 7385 3 + 1206 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67444.peg.890 CDS gi|387982435|gb|AJVH01000013.1| 7410 8360 3 + 951 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67444.peg.891 CDS gi|387982435|gb|AJVH01000013.1| 8466 9020 3 + 555 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67444.peg.892 CDS gi|387982435|gb|AJVH01000013.1| 9023 9958 2 + 936 Tyrosine recombinase XerD - none -
fig|6666666.67444.peg.893 CDS gi|387982435|gb|AJVH01000013.1| 10150 11019 1 + 870 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67444.peg.894 CDS gi|387982435|gb|AJVH01000013.1| 11062 11880 1 + 819 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67444.peg.895 CDS gi|387982435|gb|AJVH01000013.1| 11995 12600 1 + 606 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67444.peg.896 CDS gi|387982435|gb|AJVH01000013.1| 14106 12601 -3 - 1506 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67444.peg.897 CDS gi|387982435|gb|AJVH01000013.1| 14157 15470 3 + 1314 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67444.peg.898 CDS gi|387982435|gb|AJVH01000013.1| 15483 16151 3 + 669 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67444.peg.899 CDS gi|387982435|gb|AJVH01000013.1| 16267 17841 1 + 1575 Putative Na+/H+ antiporter - none -
fig|6666666.67444.peg.900 CDS gi|387982435|gb|AJVH01000013.1| 17860 18414 1 + 555 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67444.peg.901 CDS gi|387982435|gb|AJVH01000013.1| 18518 19483 2 + 966 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67444.peg.902 CDS gi|387982435|gb|AJVH01000013.1| 19485 20210 3 + 726 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.67444.peg.903 CDS gi|387982435|gb|AJVH01000013.1| 20207 21850 2 + 1644 GTP-binding protein EngA Universal GTPases
fig|6666666.67444.peg.904 CDS gi|387982435|gb|AJVH01000013.1| 22082 23467 2 + 1386 Putative anaerobic c4-dicarboxylate transport protein - none -
fig|6666666.67444.peg.905 CDS gi|387982435|gb|AJVH01000013.1| 24541 23498 -1 - 1044 FIG00545160: hypothetical protein - none -
fig|6666666.67444.peg.906 CDS gi|387982435|gb|AJVH01000013.1| 24501 25751 3 + 1251 possible esterase - none -
fig|6666666.67444.peg.907 CDS gi|387982435|gb|AJVH01000013.1| 27711 26524 -3 - 1188 hydrolase of the alpha/beta superfamily - none -
fig|6666666.67444.peg.908 CDS gi|387982435|gb|AJVH01000013.1| 27980 30274 2 + 2295 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67444.peg.909 CDS gi|387982435|gb|AJVH01000013.1| 30441 30872 3 + 432 FIG00672531: hypothetical protein - none -
fig|6666666.67444.peg.910 CDS gi|387982435|gb|AJVH01000013.1| 30950 31720 2 + 771 FIG00545122: hypothetical protein - none -
fig|6666666.67444.peg.911 CDS gi|387982435|gb|AJVH01000013.1| 31743 32330 3 + 588 FIG00544095: hypothetical protein - none -
fig|6666666.67444.peg.912 CDS gi|387982435|gb|AJVH01000013.1| 32482 33042 1 + 561 FIG00544641: hypothetical protein - none -
fig|6666666.67444.peg.913 CDS gi|387982435|gb|AJVH01000013.1| 33666 33118 -3 - 549 Putative secreted protein - none -
fig|6666666.67444.peg.914 CDS gi|387982435|gb|AJVH01000013.1| 34531 33719 -1 - 813 Putative secreted protein - none -
fig|6666666.67444.peg.915 CDS gi|387982435|gb|AJVH01000013.1| 35441 34563 -2 - 879 FIG00545058: hypothetical protein - none -
fig|6666666.67444.peg.916 CDS gi|387982435|gb|AJVH01000013.1| 36490 35438 -1 - 1053 FIG00546228: hypothetical protein - none -
fig|6666666.67444.peg.917 CDS gi|387982435|gb|AJVH01000013.1| 37881 36487 -3 - 1395 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.67444.peg.918 CDS gi|387982435|gb|AJVH01000013.1| 39264 37906 -3 - 1359 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67444.peg.919 CDS gi|387982435|gb|AJVH01000013.1| 40821 39367 -3 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67444.peg.920 CDS gi|387982435|gb|AJVH01000013.1| 40894 41388 1 + 495 FIG00544657: hypothetical protein - none -
fig|6666666.67444.peg.921 CDS gi|387982435|gb|AJVH01000013.1| 42485 41385 -2 - 1101 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.67444.peg.922 CDS gi|387982435|gb|AJVH01000013.1| 42534 43121 3 + 588 FIG00544791: hypothetical protein - none -
fig|6666666.67444.peg.923 CDS gi|387982435|gb|AJVH01000013.1| 44562 43198 -3 - 1365 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67444.peg.924 CDS gi|387982435|gb|AJVH01000013.1| 44739 46034 3 + 1296 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67444.peg.925 CDS gi|387982435|gb|AJVH01000013.1| 46429 46049 -1 - 381 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67444.peg.926 CDS gi|387982435|gb|AJVH01000013.1| 46890 46696 -3 - 195 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67444.peg.927 CDS gi|387982435|gb|AJVH01000013.1| 47455 46928 -1 - 528 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67444.peg.928 CDS gi|387982435|gb|AJVH01000013.1| 47931 47497 -3 - 435 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67444.peg.929 CDS gi|387982435|gb|AJVH01000013.1| 48241 48020 -1 - 222 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67444.peg.930 CDS gi|387982435|gb|AJVH01000013.1| 48564 49538 3 + 975 Putative sodium-dependent transport membrane protein - none -
fig|6666666.67444.peg.931 CDS gi|387982435|gb|AJVH01000013.1| 50113 49958 -1 - 156 FIG00546418: hypothetical protein - none -
fig|6666666.67444.peg.932 CDS gi|387982435|gb|AJVH01000013.1| 50841 50143 -3 - 699 Putative secreted protein - none -
fig|6666666.67444.peg.933 CDS gi|387982435|gb|AJVH01000013.1| 51478 51837 1 + 360 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67444.peg.934 CDS gi|387982435|gb|AJVH01000013.1| 52718 51915 -2 - 804 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67444.peg.935 CDS gi|387982435|gb|AJVH01000013.1| 54303 52744 -3 - 1560 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67444.peg.936 CDS gi|387982435|gb|AJVH01000013.1| 54843 54313 -3 - 531 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67444.peg.937 CDS gi|387982435|gb|AJVH01000013.1| 57318 54883 -3 - 2436 CobN component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67444.peg.938 CDS gi|387982435|gb|AJVH01000013.1| 58508 57417 -2 - 1092 CobN component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67444.peg.939 CDS gi|387982435|gb|AJVH01000013.1| 58916 60067 2 + 1152 Cobalamin biosynthesis protein CobG - none -
fig|6666666.67444.peg.940 CDS gi|387982435|gb|AJVH01000013.1| 60064 60714 1 + 651 Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis
fig|6666666.67444.peg.941 CDS gi|387982435|gb|AJVH01000013.1| 60711 62207 3 + 1497 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) / Cobalt-precorrin-3b C17-methyltransferase Cobalamin synthesis;
Cobalamin synthesis
fig|6666666.67444.peg.942 CDS gi|387982435|gb|AJVH01000013.1| 63020 62289 -2 - 732 Cobalt-precorrin-6x reductase (EC 1.3.1.54) Cobalamin synthesis
fig|6666666.67444.peg.943 CDS gi|387982435|gb|AJVH01000013.1| 63781 63008 -1 - 774 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis
fig|6666666.67444.peg.944 CDS gi|387982435|gb|AJVH01000013.1| 65089 63809 -1 - 1281 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.67444.peg.945 CDS gi|387982435|gb|AJVH01000013.1| 65888 65112 -2 - 777 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67444.peg.946 CDS gi|387982435|gb|AJVH01000013.1| 67024 65885 -1 - 1140 probable metallopeptidase - none -
fig|6666666.67444.peg.947 CDS gi|387982435|gb|AJVH01000013.1| 69867 67075 -3 - 2793 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67444.peg.948 CDS gi|387982435|gb|AJVH01000013.1| 69968 70438 2 + 471 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) ## TrmL Biotin synthesis cluster;
RNA methylation
fig|6666666.67444.peg.949 CDS gi|387982435|gb|AJVH01000013.1| 71618 70524 -2 - 1095 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67444.peg.950 CDS gi|387982435|gb|AJVH01000013.1| 71957 71691 -2 - 267 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67444.peg.951 CDS gi|387982435|gb|AJVH01000013.1| 72912 71992 -3 - 921 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67444.peg.952 CDS gi|387982435|gb|AJVH01000013.1| 73993 73016 -1 - 978 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67444.peg.953 CDS gi|387982435|gb|AJVH01000013.1| 75457 74018 -1 - 1440 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67444.peg.954 CDS gi|387982435|gb|AJVH01000013.1| 75656 75462 -2 - 195 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67444.peg.955 CDS gi|387982435|gb|AJVH01000013.1| 77183 75714 -2 - 1470 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67444.peg.956 CDS gi|387982435|gb|AJVH01000013.1| 78766 77237 -1 - 1530 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67444.peg.957 CDS gi|387982435|gb|AJVH01000013.1| 79700 78864 -2 - 837 RNA methyltransferase - none -
fig|6666666.67444.peg.958 CDS gi|387982435|gb|AJVH01000013.1| 81065 79707 -2 - 1359 aspartyl aminopeptidase - none -
fig|6666666.67444.peg.959 CDS gi|387982435|gb|AJVH01000013.1| 81167 81757 2 + 591 RecB family exonuclease - none -
fig|6666666.67444.peg.960 CDS gi|387982435|gb|AJVH01000013.1| 81757 82032 1 + 276 RecB family exonuclease - none -
fig|6666666.67444.peg.961 CDS gi|387982435|gb|AJVH01000013.1| 82156 82395 1 + 240 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.67444.peg.962 CDS gi|387982435|gb|AJVH01000013.1| 84107 82455 -2 - 1653 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67444.peg.963 CDS gi|387982435|gb|AJVH01000013.1| 85818 84244 -3 - 1575 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67444.peg.964 CDS gi|387982435|gb|AJVH01000013.1| 87400 86093 -1 - 1308 C4-dicarboxylate transporter DcuA - none -
fig|6666666.67444.peg.965 CDS gi|387982435|gb|AJVH01000013.1| 88606 87761 -1 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67444.peg.966 CDS gi|387982435|gb|AJVH01000013.1| 88951 88688 -1 - 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67444.peg.967 CDS gi|387982435|gb|AJVH01000013.1| 89641 88970 -1 - 672 Hydrolase (HAD superfamily) - none -
fig|6666666.67444.peg.968 CDS gi|387982435|gb|AJVH01000013.1| 93311 89709 -2 - 3603 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.67444.peg.969 CDS gi|387982435|gb|AJVH01000013.1| 93782 93387 -2 - 396 FIG00543988: hypothetical protein - none -
fig|6666666.67444.peg.970 CDS gi|387982435|gb|AJVH01000013.1| 95027 93783 -2 - 1245 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67444.peg.971 CDS gi|387982435|gb|AJVH01000013.1| 95951 95073 -2 - 879 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67444.peg.972 CDS gi|387982435|gb|AJVH01000013.1| 96173 97102 2 + 930 FIG00545923: hypothetical protein - none -
fig|6666666.67444.peg.973 CDS gi|387982435|gb|AJVH01000013.1| 97212 98258 3 + 1047 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67444.peg.974 CDS gi|387982435|gb|AJVH01000013.1| 98540 98427 -2 - 114 hypothetical protein - none -
fig|6666666.67444.peg.975 CDS gi|387982435|gb|AJVH01000013.1| 99215 98676 -2 - 540 Phospholipid-binding protein - none -
fig|6666666.67444.peg.976 CDS gi|387982435|gb|AJVH01000013.1| 100058 100228 2 + 171 putative oxidoreductase - none -
fig|6666666.67444.peg.977 CDS gi|387982435|gb|AJVH01000013.1| 100225 100512 1 + 288 putative oxidoreductase - none -
fig|6666666.67444.peg.978 CDS gi|387982435|gb|AJVH01000013.1| 101192 101067 -2 - 126 hypothetical protein - none -
fig|6666666.67444.peg.979 CDS gi|387982435|gb|AJVH01000013.1| 101383 101264 -1 - 120 hypothetical protein - none -
fig|6666666.67444.peg.980 CDS gi|387982435|gb|AJVH01000013.1| 101483 101370 -2 - 114 hypothetical protein - none -
fig|6666666.67444.peg.981 CDS gi|387982435|gb|AJVH01000013.1| 102600 101497 -3 - 1104 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67444.peg.982 CDS gi|387982435|gb|AJVH01000013.1| 104894 102687 -2 - 2208 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67444.peg.983 CDS gi|387982435|gb|AJVH01000013.1| 106708 104897 -1 - 1812 Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67444.peg.984 CDS gi|387982435|gb|AJVH01000013.1| 106958 107659 2 + 702 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.67444.peg.985 CDS gi|387982435|gb|AJVH01000013.1| 107720 108286 2 + 567 FIG00545282: hypothetical protein - none -
fig|6666666.67444.peg.986 CDS gi|387982435|gb|AJVH01000013.1| 109498 108371 -1 - 1128 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67444.peg.987 CDS gi|387982435|gb|AJVH01000013.1| 109929 109495 -3 - 435 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.67444.peg.988 CDS gi|387982435|gb|AJVH01000013.1| 110838 109996 -3 - 843 FIG00544636: hypothetical protein - none -
fig|6666666.67444.peg.989 CDS gi|387982435|gb|AJVH01000013.1| 110874 111659 3 + 786 FIG00546138: hypothetical protein - none -
fig|6666666.67444.peg.990 CDS gi|387982435|gb|AJVH01000013.1| 112765 111632 -1 - 1134 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.991 CDS gi|387982435|gb|AJVH01000013.1| 114473 112857 -2 - 1617 cell wall-associated hydrolase - none -
fig|6666666.67444.peg.992 CDS gi|387982435|gb|AJVH01000013.1| 114442 114591 1 + 150 hypothetical protein - none -
fig|6666666.67444.peg.993 CDS gi|387982435|gb|AJVH01000013.1| 115337 118141 2 + 2805 Aconitate hydratase (EC 4.2.1.3) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67444.peg.994 CDS gi|387982435|gb|AJVH01000013.1| 118251 118823 3 + 573 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.995 CDS gi|387982435|gb|AJVH01000013.1| 118858 119577 1 + 720 GMP synthase - none -
fig|6666666.67444.peg.996 CDS gi|387982435|gb|AJVH01000013.1| 119666 119935 2 + 270 ACT domain protein - none -
fig|6666666.67444.peg.997 CDS gi|387982435|gb|AJVH01000013.1| 119952 121316 3 + 1365 FIG00848225: hypothetical protein - none -
fig|6666666.67444.peg.998 CDS gi|387982435|gb|AJVH01000013.1| 123277 121646 -1 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.999 CDS gi|387982435|gb|AJVH01000013.1| 123803 123375 -2 - 429 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67444.peg.1000 CDS gi|387982435|gb|AJVH01000013.1| 124249 123800 -1 - 450 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67444.peg.1001 CDS gi|387982435|gb|AJVH01000013.1| 125533 124253 -1 - 1281 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67444.peg.1002 CDS gi|387982435|gb|AJVH01000013.1| 126291 125533 -3 - 759 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67444.peg.1003 CDS gi|387982435|gb|AJVH01000013.1| 127495 126320 -1 - 1176 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67444.peg.1004 CDS gi|387982435|gb|AJVH01000013.1| 128952 127498 -3 - 1455 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67444.peg.1005 CDS gi|387982435|gb|AJVH01000013.1| 129665 128949 -2 - 717 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67444.peg.1006 CDS gi|387982435|gb|AJVH01000013.1| 130112 132001 2 + 1890 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1007 CDS gi|387982435|gb|AJVH01000013.1| 132068 132979 2 + 912 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67444.peg.1008 CDS gi|387982435|gb|AJVH01000013.1| 132982 133779 1 + 798 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67444.peg.1009 CDS gi|387982435|gb|AJVH01000013.1| 133860 134798 3 + 939 Cytochrome oxidase assembly protein - none -
fig|6666666.67444.peg.1010 CDS gi|387982435|gb|AJVH01000013.1| 135863 134916 -2 - 948 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67444.peg.1011 CDS gi|387982435|gb|AJVH01000013.1| 136226 137431 2 + 1206 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67444.peg.1012 CDS gi|387982435|gb|AJVH01000013.1| 137554 138327 1 + 774 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67444.peg.1013 CDS gi|387982435|gb|AJVH01000013.1| 138451 139533 1 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.67444.peg.1014 CDS gi|387982435|gb|AJVH01000013.1| 139604 141244 2 + 1641 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67444.peg.1015 CDS gi|387982435|gb|AJVH01000013.1| 141269 142228 2 + 960 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67444.peg.1016 CDS gi|387982435|gb|AJVH01000013.1| 142254 142970 3 + 717 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67444.peg.1017 CDS gi|387982435|gb|AJVH01000013.1| 143271 143038 -3 - 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67444.peg.1018 CDS gi|387982435|gb|AJVH01000013.1| 144227 143445 -2 - 783 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67444.peg.1019 CDS gi|387982435|gb|AJVH01000013.1| 145556 144339 -2 - 1218 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67444.peg.1020 CDS gi|387982435|gb|AJVH01000013.1| 146691 145687 -3 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67444.peg.1021 CDS gi|387982435|gb|AJVH01000013.1| 146852 146977 2 + 126 hypothetical protein - none -
fig|6666666.67444.peg.1022 CDS gi|387982435|gb|AJVH01000013.1| 148051 147065 -1 - 987 FIG001886: Cytoplasmic hypothetical protein Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67444.peg.1023 CDS gi|387982435|gb|AJVH01000013.1| 149116 148145 -1 - 972 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67444.peg.1024 CDS gi|387982435|gb|AJVH01000013.1| 150035 149286 -2 - 750 FIG000506: Predicted P-loop-containing kinase Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67444.peg.1025 CDS gi|387982435|gb|AJVH01000013.1| 152104 150041 -1 - 2064 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67444.peg.1026 CDS gi|387982435|gb|AJVH01000013.1| 152269 152114 -1 - 156 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67444.peg.1027 CDS gi|387982435|gb|AJVH01000013.1| 152676 152323 -3 - 354 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67444.peg.1028 CDS gi|387982435|gb|AJVH01000013.1| 153282 152815 -3 - 468 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67444.peg.1029 CDS gi|387982435|gb|AJVH01000013.1| 154467 153283 -3 - 1185 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67444.peg.1030 CDS gi|387982435|gb|AJVH01000013.1| 155244 154636 -3 - 609 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67444.peg.1031 CDS gi|387982435|gb|AJVH01000013.1| 156447 155302 -3 - 1146 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67444.peg.1032 CDS gi|387982435|gb|AJVH01000013.1| 157075 156401 -1 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67444.peg.1033 CDS gi|387982435|gb|AJVH01000013.1| 158586 157129 -3 - 1458 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) RNA methylation
fig|6666666.67444.peg.1034 CDS gi|387982435|gb|AJVH01000013.1| 159518 158583 -2 - 936 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67444.peg.1035 CDS gi|387982435|gb|AJVH01000013.1| 160064 159555 -2 - 510 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Translation termination factors bacterial
fig|6666666.67444.peg.1036 CDS gi|387982435|gb|AJVH01000013.1| 162126 160144 -3 - 1983 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67444.peg.1037 CDS gi|387982435|gb|AJVH01000013.1| 163421 162189 -2 - 1233 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67444.peg.1038 CDS gi|387982435|gb|AJVH01000013.1| 164806 163562 -1 - 1245 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67444.peg.1039 CDS gi|387982435|gb|AJVH01000013.1| 165186 164908 -3 - 279 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67444.peg.1040 CDS gi|387982435|gb|AJVH01000013.1| 165835 165260 -1 - 576 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67444.peg.1041 CDS gi|387982435|gb|AJVH01000013.1| 166162 165839 -1 - 324 integration host factor - none -
fig|6666666.67444.peg.1042 CDS gi|387982435|gb|AJVH01000013.1| 166810 166511 -1 - 300 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67444.peg.1043 CDS gi|387982435|gb|AJVH01000013.1| 167358 166825 -3 - 534 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67444.peg.1044 CDS gi|387982435|gb|AJVH01000013.1| 170711 167355 -2 - 3357 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67444.peg.1045 CDS gi|387982435|gb|AJVH01000013.1| 171871 170732 -1 - 1140 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67444.peg.1046 CDS gi|387982435|gb|AJVH01000013.1| 173373 172027 -3 - 1347 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis;
Zinc regulated enzymes
fig|6666666.67444.peg.1047 CDS gi|387982435|gb|AJVH01000013.1| 174339 173398 -3 - 942 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67444.peg.1048 CDS gi|387982435|gb|AJVH01000013.1| 174911 174339 -2 - 573 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.67444.peg.1049 CDS gi|387982435|gb|AJVH01000013.1| 175176 176537 3 + 1362 Cell division inhibitor Persister Cells
fig|6666666.67444.peg.1050 CDS gi|387982435|gb|AJVH01000013.1| 176543 176980 2 + 438 FIG00544983: hypothetical protein - none -
fig|6666666.67444.peg.1051 CDS gi|387982435|gb|AJVH01000013.1| 176980 177390 1 + 411 FIG00546283: hypothetical protein - none -
fig|6666666.67444.peg.1052 CDS gi|387982435|gb|AJVH01000013.1| 178043 177444 -2 - 600 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67444.peg.1053 CDS gi|387982435|gb|AJVH01000013.1| 178624 178061 -1 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67444.peg.1054 CDS gi|387982435|gb|AJVH01000013.1| 179817 178726 -3 - 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67444.peg.1055 CDS gi|387982435|gb|AJVH01000013.1| 180290 179850 -2 - 441 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67444.peg.1056 CDS gi|387982435|gb|AJVH01000013.1| 181370 180291 -2 - 1080 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67444.peg.1057 CDS gi|387982435|gb|AJVH01000013.1| 181965 181417 -3 - 549 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67444.peg.1058 CDS gi|387982435|gb|AJVH01000013.1| 183133 181973 -1 - 1161 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67444.peg.1059 CDS gi|387982435|gb|AJVH01000013.1| 183142 183261 1 + 120 hypothetical protein - none -
fig|6666666.67444.peg.1060 CDS gi|387982435|gb|AJVH01000013.1| 184644 183775 -3 - 870 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67444.peg.1061 CDS gi|387982435|gb|AJVH01000013.1| 185888 184740 -2 - 1149 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67444.peg.1062 CDS gi|387982435|gb|AJVH01000013.1| 186516 186001 -3 - 516 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.67444.peg.1063 CDS gi|387982435|gb|AJVH01000013.1| 189484 186782 -1 - 2703 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67444.peg.1064 CDS gi|387982435|gb|AJVH01000013.1| 190968 189610 -3 - 1359 ATPase, AAA family - none -
fig|6666666.67444.peg.1065 CDS gi|387982435|gb|AJVH01000013.1| 192267 191005 -3 - 1263 FIG00544116: hypothetical protein - none -
fig|6666666.67444.peg.1066 CDS gi|387982435|gb|AJVH01000013.1| 194189 192390 -2 - 1800 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67444.peg.1067 CDS gi|387982435|gb|AJVH01000013.1| 194417 195301 2 + 885 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67444.peg.1068 CDS gi|387982435|gb|AJVH01000013.1| 198036 195382 -3 - 2655 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.67444.peg.1069 CDS gi|387982435|gb|AJVH01000013.1| 200136 198115 -3 - 2022 Putative membrane protein - none -
fig|6666666.67444.peg.1070 CDS gi|387982435|gb|AJVH01000013.1| 200888 200154 -2 - 735 No significant database matches - none -
fig|6666666.67444.peg.1071 CDS gi|387982435|gb|AJVH01000013.1| 201254 201141 -2 - 114 hypothetical protein - none -
fig|6666666.67444.peg.1072 CDS gi|387982435|gb|AJVH01000013.1| 201426 201641 3 + 216 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.1073 CDS gi|387982435|gb|AJVH01000013.1| 201686 203074 2 + 1389 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67444.peg.1074 CDS gi|387982435|gb|AJVH01000013.1| 204417 203146 -3 - 1272 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67444.peg.1075 CDS gi|387982435|gb|AJVH01000013.1| 205114 204458 -1 - 657 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67444.peg.1076 CDS gi|387982435|gb|AJVH01000013.1| 205621 205124 -1 - 498 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.67444.peg.1077 CDS gi|387982435|gb|AJVH01000013.1| 205765 206607 1 + 843 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.67444.peg.1078 CDS gi|387982435|gb|AJVH01000013.1| 206769 207077 3 + 309 Putative membrane protein - none -
fig|6666666.67444.peg.1079 CDS gi|387982435|gb|AJVH01000013.1| 209315 207150 -2 - 2166 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67444.peg.1080 CDS gi|387982435|gb|AJVH01000013.1| 210042 209488 -3 - 555 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67444.peg.1081 CDS gi|387982435|gb|AJVH01000013.1| 211714 210098 -1 - 1617 hypothetical protein - none -
fig|6666666.67444.peg.1082 CDS gi|387982435|gb|AJVH01000013.1| 213030 211918 -3 - 1113 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67444.peg.1083 CDS gi|387982435|gb|AJVH01000013.1| 214809 213031 -3 - 1779 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67444.peg.1084 CDS gi|387982435|gb|AJVH01000013.1| 215207 215040 -2 - 168 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.67444.peg.1085 CDS gi|387982435|gb|AJVH01000013.1| 216425 215337 -2 - 1089 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67444.peg.1086 CDS gi|387982435|gb|AJVH01000013.1| 216973 216443 -1 - 531 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67444.peg.1087 CDS gi|387982435|gb|AJVH01000013.1| 217632 217093 -3 - 540 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67444.peg.1088 CDS gi|387982435|gb|AJVH01000013.1| 218520 217768 -3 - 753 FIG000859: hypothetical protein YebC CBSS-1806.1.peg.1285;
Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.67444.peg.1089 CDS gi|387982435|gb|AJVH01000013.1| 218657 218535 -2 - 123 hypothetical protein - none -
fig|6666666.67444.peg.1090 CDS gi|387982435|gb|AJVH01000013.1| 219612 218758 -3 - 855 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II;
CBSS-1806.1.peg.1285
fig|6666666.67444.peg.1091 CDS gi|387982435|gb|AJVH01000013.1| 219768 220988 3 + 1221 putative integral membrane protein - none -
fig|6666666.67444.peg.1092 CDS gi|387982435|gb|AJVH01000013.1| 221060 221785 2 + 726 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.1093 CDS gi|387982435|gb|AJVH01000013.1| 221785 222975 1 + 1191 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67444.peg.1094 CDS gi|387982435|gb|AJVH01000013.1| 223433 222972 -2 - 462 FIG053954: Probable conserved membrane protein CBSS-1806.1.peg.1285
fig|6666666.67444.peg.1095 CDS gi|387982435|gb|AJVH01000013.1| 224545 223445 -1 - 1101 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) CBSS-1806.1.peg.1285
fig|6666666.67444.peg.1096 CDS gi|387982435|gb|AJVH01000013.1| 225504 224563 -3 - 942 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) CBSS-1806.1.peg.1285
fig|6666666.67444.peg.1097 CDS gi|387982435|gb|AJVH01000013.1| 226184 225531 -2 - 654 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.1098 CDS gi|387982435|gb|AJVH01000013.1| 226761 226177 -3 - 585 FIG049476: HIT family protein CBSS-1806.1.peg.1285
fig|6666666.67444.peg.1099 CDS gi|387982435|gb|AJVH01000013.1| 229008 226945 -3 - 2064 Threonyl-tRNA synthetase (EC 6.1.1.3) CBSS-1806.1.peg.1285;
tRNA aminoacylation, Thr
fig|6666666.67444.peg.1100 CDS gi|387982435|gb|AJVH01000013.1| 230468 229197 -2 - 1272 Dyp-type peroxidase family protein - none -
fig|6666666.67444.peg.1101 CDS gi|387982435|gb|AJVH01000013.1| 231125 230511 -2 - 615 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67444.peg.1102 CDS gi|387982435|gb|AJVH01000013.1| 231625 231164 -1 - 462 FIG00543909: hypothetical protein - none -
fig|6666666.67444.peg.1103 CDS gi|387982435|gb|AJVH01000013.1| 232663 233460 1 + 798 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.67444.peg.1104 CDS gi|387982435|gb|AJVH01000013.1| 233518 233928 1 + 411 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67444.peg.1105 CDS gi|387982435|gb|AJVH01000013.1| 234711 234007 -3 - 705 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1106 CDS gi|387982435|gb|AJVH01000013.1| 234918 235517 3 + 600 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67444.peg.1107 CDS gi|387982435|gb|AJVH01000013.1| 235536 236759 3 + 1224 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.67444.peg.1108 CDS gi|387982435|gb|AJVH01000013.1| 238727 236820 -2 - 1908 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67444.peg.1109 CDS gi|387982435|gb|AJVH01000013.1| 240201 238939 -3 - 1263 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67444.peg.1110 CDS gi|387982435|gb|AJVH01000013.1| 241238 240501 -2 - 738 FIG00545882: hypothetical protein - none -
fig|6666666.67444.peg.1111 CDS gi|387982435|gb|AJVH01000013.1| 241755 241297 -3 - 459 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67444.peg.1112 CDS gi|387982435|gb|AJVH01000013.1| 241898 242410 2 + 513 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1113 CDS gi|387982435|gb|AJVH01000013.1| 242739 242446 -3 - 294 FIG00545109: hypothetical protein - none -
fig|6666666.67444.peg.1114 CDS gi|387982435|gb|AJVH01000013.1| 243815 242931 -2 - 885 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67444.peg.1115 CDS gi|387982435|gb|AJVH01000013.1| 243967 244728 1 + 762 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67444.peg.1116 CDS gi|387982435|gb|AJVH01000013.1| 244927 245058 1 + 132 Putative membrane protein - none -
fig|6666666.67444.peg.1117 CDS gi|387982435|gb|AJVH01000013.1| 245121 246701 3 + 1581 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.67444.peg.1118 CDS gi|387982435|gb|AJVH01000013.1| 247388 247035 -2 - 354 FIG00545427: hypothetical protein - none -
fig|6666666.67444.peg.1119 CDS gi|387982435|gb|AJVH01000013.1| 247388 247504 2 + 117 hypothetical protein - none -
fig|6666666.67444.peg.1120 CDS gi|387982435|gb|AJVH01000013.1| 249329 247617 -2 - 1713 DNA or RNA helicases of superfamily II - none -
fig|6666666.67444.peg.1121 CDS gi|387982435|gb|AJVH01000013.1| 249478 249326 -1 - 153 FIG00544358: hypothetical protein - none -
fig|6666666.67444.peg.1122 CDS gi|387982435|gb|AJVH01000013.1| 249856 250113 1 + 258 FIG00545207: hypothetical protein - none -
fig|6666666.67444.peg.1123 CDS gi|387982435|gb|AJVH01000013.1| 250291 251691 1 + 1401 Putative transferase - none -
fig|6666666.67444.peg.1124 CDS gi|387982435|gb|AJVH01000013.1| 251702 252139 2 + 438 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67444.peg.1125 CDS gi|387982435|gb|AJVH01000013.1| 252223 253212 1 + 990 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67444.peg.1126 CDS gi|387982435|gb|AJVH01000013.1| 253437 254117 3 + 681 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.1127 CDS gi|387982435|gb|AJVH01000013.1| 254140 255126 1 + 987 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.67444.peg.1128 CDS gi|387982435|gb|AJVH01000013.1| 256189 255176 -1 - 1014 FIG00544535: hypothetical protein - none -
fig|6666666.67444.peg.1129 CDS gi|387982435|gb|AJVH01000013.1| 256471 257412 1 + 942 FIG00544614: hypothetical protein - none -
fig|6666666.67444.peg.1130 CDS gi|387982435|gb|AJVH01000013.1| 257445 259979 3 + 2535 putative helicase - none -
fig|6666666.67444.peg.1131 CDS gi|387982435|gb|AJVH01000013.1| 260579 260055 -2 - 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.67444.peg.1132 CDS gi|387982435|gb|AJVH01000013.1| 261178 260582 -1 - 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.67444.peg.1133 CDS gi|387982435|gb|AJVH01000013.1| 261404 262342 2 + 939 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67444.peg.1134 CDS gi|387982435|gb|AJVH01000013.1| 263459 262398 -2 - 1062 FIG00544563: hypothetical protein - none -
fig|6666666.67444.peg.1135 CDS gi|387982435|gb|AJVH01000013.1| 263590 266634 1 + 3045 ATP-dependent helicase HrpA - none -
fig|6666666.67444.peg.1136 CDS gi|387982435|gb|AJVH01000013.1| 266812 266687 -1 - 126 hypothetical protein - none -
fig|6666666.67444.peg.1137 CDS gi|387982435|gb|AJVH01000013.1| 266763 267443 3 + 681 ATP-dependent helicase HrpA - none -
fig|6666666.67444.peg.1138 CDS gi|387982435|gb|AJVH01000013.1| 267819 267505 -3 - 315 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67444.peg.1139 CDS gi|387982435|gb|AJVH01000013.1| 268393 268058 -1 - 336 Putative membrane protein - none -
fig|6666666.67444.peg.1140 CDS gi|387982435|gb|AJVH01000013.1| 268733 269446 2 + 714 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67444.peg.1141 CDS gi|387982435|gb|AJVH01000013.1| 269768 270544 2 + 777 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.67444.peg.1142 CDS gi|387982435|gb|AJVH01000013.1| 272332 270638 -1 - 1695 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.67444.peg.1143 CDS gi|387982435|gb|AJVH01000013.1| 272600 273403 2 + 804 Putative sugar related operon transcriptional regulator (PTS system) - none -
fig|6666666.67444.peg.1144 CDS gi|387982435|gb|AJVH01000013.1| 273400 274365 1 + 966 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67444.peg.1145 CDS gi|387982435|gb|AJVH01000013.1| 274734 274970 3 + 237 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67444.peg.1146 CDS gi|387982435|gb|AJVH01000013.1| 275018 275227 2 + 210 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67444.peg.1147 CDS gi|387982435|gb|AJVH01000013.1| 275202 275837 3 + 636 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67444.peg.1148 CDS gi|387982435|gb|AJVH01000013.1| 276062 276217 2 + 156 PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization
fig|6666666.67444.peg.1149 CDS gi|387982435|gb|AJVH01000013.1| 276393 276205 -3 - 189 hypothetical protein - none -
fig|6666666.67444.peg.1150 CDS gi|387982435|gb|AJVH01000013.1| 276715 276981 1 + 267 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization
fig|6666666.67444.peg.1151 CDS gi|387982435|gb|AJVH01000013.1| 277146 278264 3 + 1119 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67444.peg.1152 CDS gi|387982435|gb|AJVH01000013.1| 278323 278988 1 + 666 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.67444.peg.1153 CDS gi|387982435|gb|AJVH01000013.1| 280336 279050 -1 - 1287 xanthine/uracil permeases - none -
fig|6666666.67444.peg.1154 CDS gi|387982435|gb|AJVH01000013.1| 282029 280419 -2 - 1611 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.67444.peg.1155 CDS gi|387982435|gb|AJVH01000013.1| 282176 282931 2 + 756 FIG00546075: hypothetical protein - none -
fig|6666666.67444.peg.1156 CDS gi|387982435|gb|AJVH01000013.1| 283006 283530 1 + 525 FIG00543926: hypothetical protein - none -
fig|6666666.67444.peg.1157 CDS gi|387982435|gb|AJVH01000013.1| 284432 283539 -2 - 894 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67444.peg.1158 CDS gi|387982435|gb|AJVH01000013.1| 285337 284429 -1 - 909 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA processing
fig|6666666.67444.peg.1159 CDS gi|387982435|gb|AJVH01000013.1| 285765 285400 -3 - 366 FIG00545147: hypothetical protein - none -
fig|6666666.67444.peg.1160 CDS gi|387982435|gb|AJVH01000013.1| 286094 285795 -2 - 300 FIG00545147: hypothetical protein - none -
fig|6666666.67444.peg.1161 CDS gi|387982435|gb|AJVH01000013.1| 286292 286567 2 + 276 ATPase involved in DNA repair - none -
fig|6666666.67444.peg.1162 CDS gi|387982435|gb|AJVH01000013.1| 286675 287619 1 + 945 ATPase involved in DNA repair - none -
fig|6666666.67444.peg.1163 CDS gi|387982435|gb|AJVH01000013.1| 287807 288832 2 + 1026 No significant database matches - none -
fig|6666666.67444.peg.1164 CDS gi|387982435|gb|AJVH01000013.1| 289479 288841 -3 - 639 FIG00544570: hypothetical protein - none -
fig|6666666.67444.peg.1165 CDS gi|387982435|gb|AJVH01000013.1| 291160 289529 -1 - 1632 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67444.peg.1166 CDS gi|387982435|gb|AJVH01000013.1| 291865 291236 -1 - 630 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67444.peg.1167 CDS gi|387982435|gb|AJVH01000013.1| 292973 291855 -2 - 1119 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67444.peg.1168 CDS gi|387982435|gb|AJVH01000013.1| 293360 293229 -2 - 132 FIG00545605: hypothetical protein - none -
fig|6666666.67444.peg.1169 CDS gi|387982435|gb|AJVH01000013.1| 293506 294090 1 + 585 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67444.peg.1170 CDS gi|387982435|gb|AJVH01000013.1| 294154 294846 1 + 693 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67444.peg.1171 CDS gi|387982435|gb|AJVH01000013.1| 294843 295457 3 + 615 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67444.peg.1172 CDS gi|387982435|gb|AJVH01000013.1| 296352 295513 -3 - 840 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67444.peg.1173 CDS gi|387982435|gb|AJVH01000013.1| 296812 296483 -1 - 330 putative transcription regulator - none -
fig|6666666.67444.peg.1174 CDS gi|387982435|gb|AJVH01000013.1| 297434 296901 -2 - 534 Protein Implicated in DNA repair function with RecA and MutS DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.67444.peg.1175 CDS gi|387982435|gb|AJVH01000013.1| 297924 297427 -3 - 498 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.1176 CDS gi|387982435|gb|AJVH01000013.1| 298193 298405 2 + 213 FIG00544062: hypothetical protein - none -
fig|6666666.67444.peg.1177 CDS gi|387982435|gb|AJVH01000013.1| 299495 298488 -2 - 1008 Integral membrane protein TerC - none -
fig|6666666.67444.peg.1178 CDS gi|387982435|gb|AJVH01000013.1| 302688 299776 -3 - 2913 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.67444.peg.1179 CDS gi|387982435|gb|AJVH01000013.1| 303570 302905 -3 - 666 FIG00544433: hypothetical protein - none -
fig|6666666.67444.peg.1180 CDS gi|387982435|gb|AJVH01000013.1| 305710 303656 -1 - 2055 Ribonuclease J2 (endoribonuclease in RNA processing) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Ribonucleases in Bacillus
fig|6666666.67444.peg.1181 CDS gi|387982435|gb|AJVH01000013.1| 306627 305713 -3 - 915 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67444.peg.1182 CDS gi|387982435|gb|AJVH01000013.1| 307458 306700 -3 - 759 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67444.peg.1183 CDS gi|387982435|gb|AJVH01000013.1| 308204 307458 -2 - 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67444.peg.1184 CDS gi|387982435|gb|AJVH01000013.1| 310652 308385 -2 - 2268 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.67444.peg.1185 CDS gi|387982435|gb|AJVH01000013.1| 311113 310844 -1 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.67444.peg.1186 CDS gi|387982435|gb|AJVH01000013.1| 312244 311285 -1 - 960 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.1187 CDS gi|387982435|gb|AJVH01000013.1| 313253 312282 -2 - 972 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67444.peg.1188 CDS gi|387982435|gb|AJVH01000013.1| 313276 314178 1 + 903 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.67444.peg.1189 CDS gi|387982435|gb|AJVH01000013.1| 314726 314175 -2 - 552 4@1-phosphopantetheinyl transferase entD (EC 2.7.8.-) - none -
fig|6666666.67444.peg.1190 CDS gi|387982435|gb|AJVH01000013.1| 315670 314864 -1 - 807 putative SimX4 homolog - none -
fig|6666666.67444.peg.1191 CDS gi|387982435|gb|AJVH01000013.1| 317036 315717 -2 - 1320 putative DNA-damage-inducible protein F - none -
fig|6666666.67444.peg.1192 CDS gi|387982435|gb|AJVH01000013.1| 317311 317033 -1 - 279 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67444.peg.1193 CDS gi|387982435|gb|AJVH01000013.1| 317729 317280 -2 - 450 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67444.peg.1194 CDS gi|387982435|gb|AJVH01000013.1| 318348 317905 -3 - 444 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67444.peg.1195 CDS gi|387982435|gb|AJVH01000013.1| 321349 318488 -1 - 2862 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.67444.peg.1196 CDS gi|387982435|gb|AJVH01000013.1| 321792 321460 -3 - 333 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67444.peg.1197 CDS gi|387982435|gb|AJVH01000013.1| 323047 322049 -1 - 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67444.peg.1198 CDS gi|387982435|gb|AJVH01000013.1| 323598 323044 -3 - 555 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67444.peg.1199 CDS gi|387982435|gb|AJVH01000013.1| 323650 324558 1 + 909 FIG00544866: hypothetical protein - none -
fig|6666666.67444.peg.1200 CDS gi|387982435|gb|AJVH01000013.1| 326394 324637 -3 - 1758 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.67444.peg.1201 CDS gi|387982435|gb|AJVH01000013.1| 326426 327172 2 + 747 UPF0246 protein YaaA - none -
fig|6666666.67444.peg.1202 CDS gi|387982435|gb|AJVH01000013.1| 328016 327192 -2 - 825 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1203 CDS gi|387982435|gb|AJVH01000013.1| 328015 329361 1 + 1347 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67444.peg.1204 CDS gi|387982435|gb|AJVH01000013.1| 330489 329365 -3 - 1125 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis);
Zinc regulated enzymes
fig|6666666.67444.peg.1205 CDS gi|387982435|gb|AJVH01000013.1| 331018 330509 -1 - 510 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67444.peg.1206 CDS gi|387982435|gb|AJVH01000013.1| 332387 331008 -2 - 1380 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis
fig|6666666.67444.peg.1207 CDS gi|387982435|gb|AJVH01000013.1| 333001 332381 -1 - 621 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Cobalamin synthesis
fig|6666666.67444.peg.1208 CDS gi|387982435|gb|AJVH01000013.1| 333811 333125 -1 - 687 ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67444.peg.1209 CDS gi|387982435|gb|AJVH01000013.1| 334976 333891 -2 - 1086 ChlI component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67444.peg.1210 CDS gi|387982435|gb|AJVH01000013.1| 336673 335174 -1 - 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67444.peg.1211 CDS gi|387982435|gb|AJVH01000013.1| 336994 338064 1 + 1071 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67444.peg.1212 CDS gi|387982435|gb|AJVH01000013.1| 338162 339553 2 + 1392 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67444.peg.1213 CDS gi|387982435|gb|AJVH01000013.1| 341050 339611 -1 - 1440 Cobyric acid synthase - none -
fig|6666666.67444.peg.1214 CDS gi|387982435|gb|AJVH01000013.1| 341997 341113 -3 - 885 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67444.peg.1215 CDS gi|387982435|gb|AJVH01000013.1| 343900 342044 -1 - 1857 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.1216 CDS gi|387982435|gb|AJVH01000013.1| 345192 344017 -3 - 1176 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67444.peg.1217 CDS gi|387982435|gb|AJVH01000013.1| 346512 345298 -3 - 1215 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.67444.peg.1218 CDS gi|387982435|gb|AJVH01000013.1| 347720 346557 -2 - 1164 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67444.peg.1219 CDS gi|387982435|gb|AJVH01000013.1| 348051 348476 3 + 426 hypothetical membrane protein - none -
fig|6666666.67444.peg.1220 CDS gi|387982435|gb|AJVH01000013.1| 349662 348556 -3 - 1107 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67444.peg.1221 CDS gi|387982435|gb|AJVH01000013.1| 349832 350215 2 + 384 FIG00544474: hypothetical protein - none -
fig|6666666.67444.peg.1222 CDS gi|387982435|gb|AJVH01000013.1| 351156 350278 -3 - 879 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.1223 CDS gi|387982435|gb|AJVH01000013.1| 351144 351263 3 + 120 hypothetical protein - none -
fig|6666666.67444.peg.1224 CDS gi|387982435|gb|AJVH01000013.1| 351837 351280 -3 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67444.peg.1225 CDS gi|387982435|gb|AJVH01000013.1| 352640 351909 -2 - 732 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67444.peg.1226 CDS gi|387982435|gb|AJVH01000013.1| 353689 352862 -1 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67444.peg.1227 CDS gi|387982435|gb|AJVH01000013.1| 354770 353970 -2 - 801 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.67444.peg.1228 CDS gi|387982435|gb|AJVH01000013.1| 355138 355671 1 + 534 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.67444.peg.1229 CDS gi|387982435|gb|AJVH01000013.1| 356594 355686 -2 - 909 Tyrosine recombinase XerC - none -
fig|6666666.67444.peg.1230 CDS gi|387982435|gb|AJVH01000013.1| 358012 356861 -1 - 1152 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67444.peg.1231 CDS gi|387982435|gb|AJVH01000013.1| 359559 358009 -3 - 1551 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67444.peg.1232 CDS gi|387982435|gb|AJVH01000013.1| 359968 359546 -1 - 423 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.67444.peg.1233 CDS gi|387982435|gb|AJVH01000013.1| 360450 360145 -3 - 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67444.peg.1234 CDS gi|387982435|gb|AJVH01000013.1| 361152 360463 -3 - 690 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H;
Ribonucleases in Bacillus
fig|6666666.67444.peg.1235 CDS gi|387982435|gb|AJVH01000013.1| 361979 361149 -2 - 831 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67444.peg.1236 CDS gi|387982770|gb|AJVH01000012.1| 176 9 -2 - 168 Similar to ribosomal large subunit pseudouridine synthase D, type RluD4 RNA pseudouridine syntheses
fig|6666666.67444.peg.1237 CDS gi|387982770|gb|AJVH01000012.1| 1374 805 -3 - 570 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67444.peg.1238 CDS gi|387982770|gb|AJVH01000012.1| 1509 1387 -3 - 123 hypothetical protein - none -
fig|6666666.67444.peg.1239 CDS gi|387982770|gb|AJVH01000012.1| 2161 1514 -1 - 648 FIG00546748: hypothetical protein - none -
fig|6666666.67444.peg.1240 CDS gi|387982770|gb|AJVH01000012.1| 3830 2166 -2 - 1665 DNA repair helicase - none -
fig|6666666.67444.peg.1241 CDS gi|387982770|gb|AJVH01000012.1| 6194 3876 -2 - 2319 FIG00545438: hypothetical protein - none -
fig|6666666.67444.peg.1242 CDS gi|387982770|gb|AJVH01000012.1| 6270 6449 3 + 180 FIG00543815: hypothetical protein - none -
fig|6666666.67444.peg.1243 CDS gi|387982770|gb|AJVH01000012.1| 7257 6634 -3 - 624 FIG00996461: hypothetical protein - none -
fig|6666666.67444.peg.1244 CDS gi|387982770|gb|AJVH01000012.1| 7492 7617 1 + 126 hypothetical protein - none -
fig|6666666.67444.peg.1245 CDS gi|387982770|gb|AJVH01000012.1| 7938 8327 3 + 390 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67444.peg.1246 CDS gi|387982770|gb|AJVH01000012.1| 8958 8434 -3 - 525 FIG00545981: hypothetical protein - none -
fig|6666666.67444.peg.1247 CDS gi|387982770|gb|AJVH01000012.1| 9802 8945 -1 - 858 glutamine cyclotransferase - none -
fig|6666666.67444.peg.1248 CDS gi|387982770|gb|AJVH01000012.1| 9914 10615 2 + 702 FIG00546806: hypothetical protein - none -
fig|6666666.67444.peg.1249 CDS gi|387982770|gb|AJVH01000012.1| 10789 12276 1 + 1488 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67444.peg.1250 CDS gi|387982770|gb|AJVH01000012.1| 12355 13251 1 + 897 putative rRNA methylase - none -
fig|6666666.67444.peg.1251 CDS gi|387982770|gb|AJVH01000012.1| 14144 13248 -2 - 897 FIG00544583: hypothetical protein - none -
fig|6666666.67444.peg.1252 CDS gi|387982770|gb|AJVH01000012.1| 15220 14165 -1 - 1056 FIG00545091: hypothetical protein - none -
fig|6666666.67444.peg.1253 CDS gi|387982770|gb|AJVH01000012.1| 16557 15427 -3 - 1131 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67444.peg.1254 CDS gi|387982770|gb|AJVH01000012.1| 17245 18537 1 + 1293 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67444.peg.1255 CDS gi|387982770|gb|AJVH01000012.1| 18704 19063 2 + 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67444.peg.1256 CDS gi|387982770|gb|AJVH01000012.1| 20655 19150 -3 - 1506 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67444.peg.1257 CDS gi|387982770|gb|AJVH01000012.1| 20748 21620 3 + 873 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67444.peg.1258 CDS gi|387982770|gb|AJVH01000012.1| 21620 21865 2 + 246 Enoyl-CoA hydratase (EC 4.2.1.17) - none -
fig|6666666.67444.peg.1259 CDS gi|387982770|gb|AJVH01000012.1| 21898 22398 1 + 501 Enoyl-CoA hydratase (EC 4.2.1.17) - none -
fig|6666666.67444.peg.1260 CDS gi|387982770|gb|AJVH01000012.1| 22748 23089 2 + 342 FIG00544151: hypothetical protein - none -
fig|6666666.67444.peg.1261 CDS gi|387982770|gb|AJVH01000012.1| 23093 24745 2 + 1653 putative transport protein - none -
fig|6666666.67444.peg.1262 CDS gi|387982770|gb|AJVH01000012.1| 24951 25724 3 + 774 FIG00544899: hypothetical protein - none -
fig|6666666.67444.peg.1263 CDS gi|387982770|gb|AJVH01000012.1| 26625 25717 -3 - 909 Putative secreted protein - none -
fig|6666666.67444.peg.1264 CDS gi|387982770|gb|AJVH01000012.1| 27413 26754 -2 - 660 Na+/H+ antiporter - none -
fig|6666666.67444.peg.1265 CDS gi|387982770|gb|AJVH01000012.1| 27953 27426 -2 - 528 Na+/H+ antiporter - none -
fig|6666666.67444.peg.1266 CDS gi|387982770|gb|AJVH01000012.1| 29242 28676 -1 - 567 hypothetical protein - none -
fig|6666666.67444.peg.1267 CDS gi|387982770|gb|AJVH01000012.1| 29713 29988 1 + 276 No significant database matches - none -
fig|6666666.67444.peg.1268 CDS gi|387982770|gb|AJVH01000012.1| 30638 30516 -2 - 123 hypothetical protein - none -
fig|6666666.67444.peg.1269 CDS gi|387982770|gb|AJVH01000012.1| 30716 30991 2 + 276 FIG00544401: hypothetical protein - none -
fig|6666666.67444.peg.1270 CDS gi|387982770|gb|AJVH01000012.1| 30998 31750 2 + 753 Precorrin-6A synthase (EC 2.1.1.152) - none -
fig|6666666.67444.peg.1271 CDS gi|387982770|gb|AJVH01000012.1| 32026 31769 -1 - 258 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.67444.peg.1272 CDS gi|387982770|gb|AJVH01000012.1| 32550 32047 -3 - 504 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67444.peg.1273 CDS gi|387982770|gb|AJVH01000012.1| 33389 32550 -2 - 840 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.67444.peg.1274 CDS gi|387982770|gb|AJVH01000012.1| 34214 33456 -2 - 759 inositol monophosphatase family protein - none -
fig|6666666.67444.peg.1275 CDS gi|387982770|gb|AJVH01000012.1| 34274 39052 2 + 4779 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67444.peg.1276 CDS gi|387982770|gb|AJVH01000012.1| 39678 39049 -3 - 630 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.67444.peg.1277 CDS gi|387982770|gb|AJVH01000012.1| 39664 40536 1 + 873 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67444.peg.1278 CDS gi|387982770|gb|AJVH01000012.1| 42201 40519 -3 - 1683 putative transport protein - none -
fig|6666666.67444.peg.1279 CDS gi|387982770|gb|AJVH01000012.1| 42259 42672 1 + 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1280 CDS gi|387982770|gb|AJVH01000012.1| 44401 42758 -1 - 1644 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67444.peg.1281 CDS gi|387982770|gb|AJVH01000012.1| 44595 46088 3 + 1494 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67444.peg.1282 CDS gi|387982770|gb|AJVH01000012.1| 46399 46085 -1 - 315 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67444.peg.1283 CDS gi|387982770|gb|AJVH01000012.1| 46498 48984 1 + 2487 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67444.peg.1284 CDS gi|387982770|gb|AJVH01000012.1| 50355 49147 -3 - 1209 Mobile element protein - none -
fig|6666666.67444.peg.1285 CDS gi|387982770|gb|AJVH01000012.1| 51478 50762 -1 - 717 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67444.peg.1286 CDS gi|387982770|gb|AJVH01000012.1| 51443 51565 2 + 123 hypothetical protein - none -
fig|6666666.67444.peg.1287 CDS gi|387982770|gb|AJVH01000012.1| 51782 53338 2 + 1557 FIG00544804: hypothetical protein - none -
fig|6666666.67444.peg.1288 CDS gi|387982770|gb|AJVH01000012.1| 53364 53987 3 + 624 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.67444.peg.1289 CDS gi|387982770|gb|AJVH01000012.1| 53977 55554 1 + 1578 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67444.peg.1290 CDS gi|387982770|gb|AJVH01000012.1| 56126 55983 -2 - 144 hypothetical protein - none -
fig|6666666.67444.peg.1291 CDS gi|387982770|gb|AJVH01000012.1| 56190 56453 3 + 264 FIG00549207: hypothetical protein - none -
fig|6666666.67444.peg.1292 CDS gi|387982770|gb|AJVH01000012.1| 56541 56930 3 + 390 hypothetical protein - none -
fig|6666666.67444.peg.1293 CDS gi|387982770|gb|AJVH01000012.1| 57153 57383 3 + 231 No significant database matches - none -
fig|6666666.67444.peg.1294 CDS gi|387982770|gb|AJVH01000012.1| 57431 58264 2 + 834 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.67444.peg.1295 CDS gi|387982770|gb|AJVH01000012.1| 58929 58261 -3 - 669 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.1296 CDS gi|387982770|gb|AJVH01000012.1| 59962 59054 -1 - 909 No significant database matches - none -
fig|6666666.67444.peg.1297 CDS gi|387982770|gb|AJVH01000012.1| 60407 60159 -2 - 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67444.peg.1298 CDS gi|387982770|gb|AJVH01000012.1| 60727 60422 -1 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67444.peg.1299 CDS gi|387982770|gb|AJVH01000012.1| 60895 60731 -1 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67444.peg.1300 CDS gi|387982770|gb|AJVH01000012.1| 61039 60899 -1 - 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67444.peg.1301 CDS gi|387982770|gb|AJVH01000012.1| 61605 61871 3 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67444.peg.1302 CDS gi|387982770|gb|AJVH01000012.1| 61890 62063 3 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67444.peg.1303 CDS gi|387982770|gb|AJVH01000012.1| 62292 62984 3 + 693 two-component system, response regulator - none -
fig|6666666.67444.peg.1304 CDS gi|387982770|gb|AJVH01000012.1| 62981 64525 2 + 1545 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.67444.peg.1305 CDS gi|387982770|gb|AJVH01000012.1| 64615 65901 1 + 1287 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67444.peg.1306 CDS gi|387982770|gb|AJVH01000012.1| 65941 66528 1 + 588 molybdopterin biosynthesis enzyme - none -
fig|6666666.67444.peg.1307 CDS gi|387982770|gb|AJVH01000012.1| 66582 66743 3 + 162 FIG00544516: hypothetical protein - none -
fig|6666666.67444.peg.1308 CDS gi|387982770|gb|AJVH01000012.1| 67234 66830 -1 - 405 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67444.peg.1309 CDS gi|387982770|gb|AJVH01000012.1| 68024 67341 -2 - 684 FIG00546567: hypothetical protein - none -
fig|6666666.67444.peg.1310 CDS gi|387982770|gb|AJVH01000012.1| 68456 68040 -2 - 417 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67444.peg.1311 CDS gi|387982770|gb|AJVH01000012.1| 68752 69672 1 + 921 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67444.peg.1312 CDS gi|387982770|gb|AJVH01000012.1| 69769 71034 1 + 1266 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67444.peg.1313 CDS gi|387982770|gb|AJVH01000012.1| 71040 71732 3 + 693 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.67444.peg.1314 CDS gi|387982770|gb|AJVH01000012.1| 71859 72995 3 + 1137 FIG00544639: hypothetical protein - none -
fig|6666666.67444.peg.1315 CDS gi|387982770|gb|AJVH01000012.1| 73038 73451 3 + 414 FIG00544115: hypothetical protein - none -
fig|6666666.67444.peg.1316 CDS gi|387982770|gb|AJVH01000012.1| 73438 74100 1 + 663 hypothetical membrane protein - none -
fig|6666666.67444.peg.1317 CDS gi|387982770|gb|AJVH01000012.1| 75740 74109 -2 - 1632 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1318 CDS gi|387982770|gb|AJVH01000012.1| 75950 76066 2 + 117 hypothetical protein - none -
fig|6666666.67444.peg.1319 CDS gi|387982770|gb|AJVH01000012.1| 76353 78098 3 + 1746 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67444.peg.1320 CDS gi|387982770|gb|AJVH01000012.1| 78177 79640 3 + 1464 FIG00546395: hypothetical protein - none -
fig|6666666.67444.peg.1321 CDS gi|387982770|gb|AJVH01000012.1| 79750 80625 1 + 876 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67444.peg.1322 CDS gi|387982770|gb|AJVH01000012.1| 80649 82481 3 + 1833 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67444.peg.1323 CDS gi|387982770|gb|AJVH01000012.1| 82503 83357 3 + 855 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67444.peg.1324 CDS gi|387982770|gb|AJVH01000012.1| 83502 84659 3 + 1158 Cell wall-binding protein - none -
fig|6666666.67444.peg.1325 CDS gi|387982770|gb|AJVH01000012.1| 84711 85598 3 + 888 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67444.peg.1326 CDS gi|387982770|gb|AJVH01000012.1| 85595 86530 2 + 936 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67444.peg.1327 CDS gi|387982770|gb|AJVH01000012.1| 86530 88338 1 + 1809 ABC transporter, ATP-binding protein - none -
fig|6666666.67444.peg.1328 CDS gi|387982770|gb|AJVH01000012.1| 88348 88680 1 + 333 FIG00544339: hypothetical protein - none -
fig|6666666.67444.peg.1329 CDS gi|387982770|gb|AJVH01000012.1| 88786 89175 1 + 390 Putative membrane protein - none -
fig|6666666.67444.peg.1330 CDS gi|387982770|gb|AJVH01000012.1| 89200 89739 1 + 540 putative RNA polymerase ECF-subfamily sigma factor - none -
fig|6666666.67444.peg.1331 CDS gi|387982770|gb|AJVH01000012.1| 89748 90923 3 + 1176 No significant database matches - none -
fig|6666666.67444.peg.1332 CDS gi|387982770|gb|AJVH01000012.1| 90964 91863 1 + 900 FIG00545275: hypothetical protein - none -
fig|6666666.67444.peg.1333 CDS gi|387982770|gb|AJVH01000012.1| 92652 91939 -3 - 714 Riboflavin transporter PnuX Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.67444.peg.1334 CDS gi|387982770|gb|AJVH01000012.1| 93472 92672 -1 - 801 hypothetical protein - none -
fig|6666666.67444.peg.1335 CDS gi|387982770|gb|AJVH01000012.1| 93572 94624 2 + 1053 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67444.peg.1336 CDS gi|387982770|gb|AJVH01000012.1| 95880 94621 -3 - 1260 FIG00544244: hypothetical protein - none -
fig|6666666.67444.peg.1337 CDS gi|387982770|gb|AJVH01000012.1| 96626 95916 -2 - 711 regulatory protein, TetR - none -
fig|6666666.67444.peg.1338 CDS gi|387982770|gb|AJVH01000012.1| 96736 96623 -1 - 114 Doubtful CDS. No strong consensus RBS usptream. No significant database matches - none -
fig|6666666.67444.peg.1339 CDS gi|387982770|gb|AJVH01000012.1| 98943 97513 -3 - 1431 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis
fig|6666666.67444.peg.1340 CDS gi|387982770|gb|AJVH01000012.1| 99208 99861 1 + 654 FIG00544483: hypothetical protein - none -
fig|6666666.67444.peg.1341 CDS gi|387982770|gb|AJVH01000012.1| 99922 100092 1 + 171 hypothetical protein - none -
fig|6666666.67444.peg.1342 CDS gi|387982770|gb|AJVH01000012.1| 101740 100106 -1 - 1635 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67444.peg.1343 CDS gi|387982770|gb|AJVH01000012.1| 102561 101752 -3 - 810 putative oxidoreductase - none -
fig|6666666.67444.peg.1344 CDS gi|387982770|gb|AJVH01000012.1| 103222 102593 -1 - 630 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67444.peg.1345 CDS gi|387982770|gb|AJVH01000012.1| 103321 104577 1 + 1257 hypothetical protein - none -
fig|6666666.67444.peg.1346 CDS gi|387982770|gb|AJVH01000012.1| 104606 104770 2 + 165 hypothetical protein - none -
fig|6666666.67444.peg.1347 CDS gi|387982770|gb|AJVH01000012.1| 105227 104751 -2 - 477 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67444.peg.1348 CDS gi|387982770|gb|AJVH01000012.1| 105981 105364 -3 - 618 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67444.peg.1349 CDS gi|387982770|gb|AJVH01000012.1| 108018 106204 -3 - 1815 Pullulanase (EC 3.2.1.41) Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.1350 CDS gi|387982770|gb|AJVH01000012.1| 109084 108143 -1 - 942 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67444.peg.1351 CDS gi|387982770|gb|AJVH01000012.1| 110529 109132 -3 - 1398 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67444.peg.1352 CDS gi|387982770|gb|AJVH01000012.1| 110534 110650 2 + 117 hypothetical protein - none -
fig|6666666.67444.peg.1353 CDS gi|387982770|gb|AJVH01000012.1| 111568 110672 -1 - 897 Transcriptional regulator, LysR family CBSS-349102.4.peg.3442
fig|6666666.67444.peg.1354 CDS gi|387982770|gb|AJVH01000012.1| 111656 112732 2 + 1077 FIG00548642: hypothetical protein - none -
fig|6666666.67444.peg.1355 CDS gi|387982770|gb|AJVH01000012.1| 112769 113686 2 + 918 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67444.peg.1356 CDS gi|387982770|gb|AJVH01000012.1| 113865 114059 3 + 195 Putative ABC transport system membrane protein - none -
fig|6666666.67444.peg.1357 CDS gi|387982770|gb|AJVH01000012.1| 114031 115323 1 + 1293 ABC transporter, ATP-binding protein - none -
fig|6666666.67444.peg.1358 CDS gi|387982770|gb|AJVH01000012.1| 115324 117111 1 + 1788 ABC transporter TetB - none -
fig|6666666.67444.peg.1359 CDS gi|387982770|gb|AJVH01000012.1| 117399 118031 3 + 633 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.1360 CDS gi|387982770|gb|AJVH01000012.1| 118075 121875 1 + 3801 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67444.peg.1361 CDS gi|387982770|gb|AJVH01000012.1| 121932 122357 3 + 426 No significant database matches - none -
fig|6666666.67444.peg.1362 CDS gi|387982770|gb|AJVH01000012.1| 122360 122842 2 + 483 No significant database matches - none -
fig|6666666.67444.peg.1363 CDS gi|387982770|gb|AJVH01000012.1| 124379 122853 -2 - 1527 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.67444.peg.1364 CDS gi|387982770|gb|AJVH01000012.1| 124448 125146 2 + 699 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67444.peg.1365 CDS gi|387982770|gb|AJVH01000012.1| 125158 125934 1 + 777 FIG00545464: hypothetical protein - none -
fig|6666666.67444.peg.1366 CDS gi|387982770|gb|AJVH01000012.1| 126096 127373 3 + 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.67444.peg.1367 CDS gi|387982770|gb|AJVH01000012.1| 127494 128030 3 + 537 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67444.peg.1368 CDS gi|387982770|gb|AJVH01000012.1| 128071 128637 1 + 567 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67444.peg.1369 CDS gi|387982770|gb|AJVH01000012.1| 128634 129584 3 + 951 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67444.peg.1370 CDS gi|387982770|gb|AJVH01000012.1| 130438 131406 1 + 969 Transcriptional regulator, AraC family - none -
fig|6666666.67444.peg.1371 CDS gi|387982770|gb|AJVH01000012.1| 131537 132367 2 + 831 FIG00543890: hypothetical protein - none -
fig|6666666.67444.peg.1372 CDS gi|387982770|gb|AJVH01000012.1| 132664 132437 -1 - 228 FIG00545488: hypothetical protein - none -
fig|6666666.67444.peg.1373 CDS gi|387982770|gb|AJVH01000012.1| 132642 132788 3 + 147 hypothetical protein - none -
fig|6666666.67444.peg.1374 CDS gi|387982770|gb|AJVH01000012.1| 133377 132856 -3 - 522 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67444.peg.1375 CDS gi|387982770|gb|AJVH01000012.1| 134022 133555 -3 - 468 FIG00544319: hypothetical protein - none -
fig|6666666.67444.peg.1376 CDS gi|387982770|gb|AJVH01000012.1| 134324 135211 2 + 888 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67444.peg.1377 CDS gi|387982770|gb|AJVH01000012.1| 135311 135607 2 + 297 FIG00543949: hypothetical protein - none -
fig|6666666.67444.peg.1378 CDS gi|387982770|gb|AJVH01000012.1| 135632 136429 2 + 798 (2E,6Z)-farnesyl diphosphate synthase (EC 2.5.1.68) Isoprenoinds for Quinones
fig|6666666.67444.peg.1379 CDS gi|387982770|gb|AJVH01000012.1| 136476 136976 3 + 501 FIG00544436: hypothetical protein - none -
fig|6666666.67444.peg.1380 CDS gi|387982770|gb|AJVH01000012.1| 137899 136973 -1 - 927 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67444.peg.1381 CDS gi|387982770|gb|AJVH01000012.1| 138110 139399 2 + 1290 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.67444.peg.1382 CDS gi|387982770|gb|AJVH01000012.1| 139814 139470 -2 - 345 FIG00546727: hypothetical protein - none -
fig|6666666.67444.peg.1383 CDS gi|387982770|gb|AJVH01000012.1| 139879 140559 1 + 681 putative LysR-family transcriptional regulator - none -
fig|6666666.67444.peg.1384 CDS gi|387982770|gb|AJVH01000012.1| 140641 141207 1 + 567 sortase or related acyltransferase - none -
fig|6666666.67444.peg.1385 CDS gi|387982770|gb|AJVH01000012.1| 142777 141212 -1 - 1566 permease of the major facilitator superfamily - none -
fig|6666666.67444.peg.1386 CDS gi|387982770|gb|AJVH01000012.1| 143426 142779 -2 - 648 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.1387 CDS gi|387982770|gb|AJVH01000012.1| 144974 143571 -2 - 1404 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67444.peg.1388 CDS gi|387982770|gb|AJVH01000012.1| 146248 145232 -1 - 1017 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67444.peg.1389 CDS gi|387982770|gb|AJVH01000012.1| 146552 147130 2 + 579 FIG00545451: hypothetical protein - none -
fig|6666666.67444.peg.1390 CDS gi|387982770|gb|AJVH01000012.1| 147397 147140 -1 - 258 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67444.peg.1391 CDS gi|387982770|gb|AJVH01000012.1| 148667 147426 -2 - 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67444.peg.1392 CDS gi|387982770|gb|AJVH01000012.1| 148780 149775 1 + 996 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67444.peg.1393 CDS gi|387982770|gb|AJVH01000012.1| 150630 149839 -3 - 792 FIG00544176: hypothetical protein - none -
fig|6666666.67444.peg.1394 CDS gi|387982770|gb|AJVH01000012.1| 152118 150697 -3 - 1422 FIG00546199: hypothetical protein - none -
fig|6666666.67444.peg.1395 CDS gi|387982770|gb|AJVH01000012.1| 152377 152207 -1 - 171 FIG00547082: hypothetical protein - none -
fig|6666666.67444.peg.1396 CDS gi|387982770|gb|AJVH01000012.1| 154026 152377 -3 - 1650 Sodium-dependent transporter - none -
fig|6666666.67444.peg.1397 CDS gi|387982770|gb|AJVH01000012.1| 154380 155465 3 + 1086 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.67444.peg.1398 CDS gi|387982770|gb|AJVH01000012.1| 156456 155542 -3 - 915 Membrane protein, putative - none -
fig|6666666.67444.peg.1399 CDS gi|387982770|gb|AJVH01000012.1| 156537 157430 3 + 894 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67444.peg.1400 CDS gi|387982770|gb|AJVH01000012.1| 157572 158165 3 + 594 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67444.peg.1401 CDS gi|387982770|gb|AJVH01000012.1| 159355 158180 -1 - 1176 Putative chloride channel related membrane protein - none -
fig|6666666.67444.peg.1402 CDS gi|387982770|gb|AJVH01000012.1| 159499 160878 1 + 1380 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67444.peg.1403 CDS gi|387982770|gb|AJVH01000012.1| 160875 161630 3 + 756 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67444.peg.1404 CDS gi|387982770|gb|AJVH01000012.1| 161627 162085 2 + 459 FIG00545805: hypothetical protein - none -
fig|6666666.67444.peg.1405 CDS gi|387982770|gb|AJVH01000012.1| 162347 163936 2 + 1590 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.67444.peg.1406 CDS gi|387982770|gb|AJVH01000012.1| 164027 164953 2 + 927 ABC-type transporter, permease component - none -
fig|6666666.67444.peg.1407 CDS gi|387982770|gb|AJVH01000012.1| 164946 165899 3 + 954 ABC-type transporter, permease component - none -
fig|6666666.67444.peg.1408 CDS gi|387982770|gb|AJVH01000012.1| 165902 167584 2 + 1683 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.67444.peg.1409 CDS gi|387982770|gb|AJVH01000012.1| 168152 168313 2 + 162 No significant database matches - none -
fig|6666666.67444.peg.1410 CDS gi|387982770|gb|AJVH01000012.1| 168316 169011 1 + 696 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67444.peg.1411 CDS gi|387982770|gb|AJVH01000012.1| 169013 170161 2 + 1149 Putative membrane protein - none -
fig|6666666.67444.peg.1412 CDS gi|387982770|gb|AJVH01000012.1| 172590 171862 -3 - 729 FIG00548480: hypothetical protein - none -
fig|6666666.67444.peg.1413 CDS gi|387982770|gb|AJVH01000012.1| 172935 172591 -3 - 345 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67444.peg.1414 CDS gi|387982770|gb|AJVH01000012.1| 173465 172932 -2 - 534 FIG00544603: hypothetical protein - none -
fig|6666666.67444.peg.1415 CDS gi|387982770|gb|AJVH01000012.1| 174155 173469 -2 - 687 FIG00544264: hypothetical protein - none -
fig|6666666.67444.peg.1416 CDS gi|387982770|gb|AJVH01000012.1| 174481 174356 -1 - 126 hypothetical protein - none -
fig|6666666.67444.peg.1417 CDS gi|387982770|gb|AJVH01000012.1| 174515 176425 2 + 1911 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.67444.peg.1418 CDS gi|387982770|gb|AJVH01000012.1| 176436 177965 3 + 1530 LpqW - none -
fig|6666666.67444.peg.1419 CDS gi|387982770|gb|AJVH01000012.1| 177965 178846 2 + 882 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67444.peg.1420 CDS gi|387982770|gb|AJVH01000012.1| 178873 179253 1 + 381 hypothetical membrane protein - none -
fig|6666666.67444.peg.1421 CDS gi|387982770|gb|AJVH01000012.1| 179423 179620 2 + 198 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.67444.peg.1422 CDS gi|387982770|gb|AJVH01000012.1| 179653 180750 1 + 1098 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67444.peg.1423 CDS gi|387982770|gb|AJVH01000012.1| 180996 181481 3 + 486 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67444.peg.1424 CDS gi|387982770|gb|AJVH01000012.1| 181516 182073 1 + 558 FIG00544080: hypothetical protein - none -
fig|6666666.67444.peg.1425 CDS gi|387982770|gb|AJVH01000012.1| 183255 182080 -3 - 1176 FIG00546880: hypothetical protein - none -
fig|6666666.67444.peg.1426 CDS gi|387982770|gb|AJVH01000012.1| 184757 183345 -2 - 1413 Phenylalanine-specific permease - none -
fig|6666666.67444.peg.1427 CDS gi|387982770|gb|AJVH01000012.1| 185795 184821 -2 - 975 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67444.peg.1428 CDS gi|387982770|gb|AJVH01000012.1| 187170 185806 -3 - 1365 Phenylalanine-specific permease - none -
fig|6666666.67444.peg.1429 CDS gi|387982770|gb|AJVH01000012.1| 188151 187240 -3 - 912 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67444.peg.1430 CDS gi|387982770|gb|AJVH01000012.1| 188231 189328 2 + 1098 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67444.peg.1431 CDS gi|387982770|gb|AJVH01000012.1| 189336 190100 3 + 765 FIG00543965: hypothetical protein - none -
fig|6666666.67444.peg.1432 CDS gi|387982770|gb|AJVH01000012.1| 190093 190950 1 + 858 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.67444.peg.1433 CDS gi|387982770|gb|AJVH01000012.1| 190947 191696 3 + 750 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.67444.peg.1434 CDS gi|387982770|gb|AJVH01000012.1| 191701 191979 1 + 279 FIG00545506: hypothetical protein - none -
fig|6666666.67444.peg.1435 CDS gi|387982770|gb|AJVH01000012.1| 192088 191972 -1 - 117 hypothetical protein - none -
fig|6666666.67444.peg.1436 CDS gi|387982770|gb|AJVH01000012.1| 192102 192233 3 + 132 FIG00545868: hypothetical protein - none -
fig|6666666.67444.peg.1437 CDS gi|387982770|gb|AJVH01000012.1| 192260 193129 2 + 870 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67444.peg.1438 CDS gi|387982770|gb|AJVH01000012.1| 194599 193187 -1 - 1413 levanase/invertase - none -
fig|6666666.67444.peg.1439 CDS gi|387982770|gb|AJVH01000012.1| 195349 194609 -1 - 741 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.67444.peg.1440 CDS gi|387982770|gb|AJVH01000012.1| 196562 195402 -2 - 1161 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.67444.peg.1441 CDS gi|387982770|gb|AJVH01000012.1| 196612 197895 1 + 1284 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.67444.peg.1442 CDS gi|387982770|gb|AJVH01000012.1| 198586 197954 -1 - 633 FIG00945644: hypothetical protein - none -
fig|6666666.67444.peg.1443 CDS gi|387982770|gb|AJVH01000012.1| 198786 199436 3 + 651 putative RNA polymerase sigma factor - none -
fig|6666666.67444.peg.1444 CDS gi|387982770|gb|AJVH01000012.1| 199477 199890 1 + 414 FIG00544000: hypothetical protein - none -
fig|6666666.67444.peg.1445 CDS gi|387982770|gb|AJVH01000012.1| 199921 200364 1 + 444 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67444.peg.1446 CDS gi|387982770|gb|AJVH01000012.1| 201500 200367 -2 - 1134 Mrp protein homolog - none -
fig|6666666.67444.peg.1447 CDS gi|387982770|gb|AJVH01000012.1| 202109 201513 -2 - 597 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1448 CDS gi|387982770|gb|AJVH01000012.1| 203438 202113 -2 - 1326 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67444.peg.1449 CDS gi|387982770|gb|AJVH01000012.1| 203528 204037 2 + 510 PROBABLE TRANSMEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1450 CDS gi|387982770|gb|AJVH01000012.1| 204049 204768 1 + 720 FIG00544048: hypothetical protein - none -
fig|6666666.67444.peg.1451 CDS gi|387982770|gb|AJVH01000012.1| 208537 204824 -1 - 3714 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67444.peg.1452 CDS gi|387982770|gb|AJVH01000012.1| 212440 208700 -1 - 3741 FIG00543822: hypothetical protein - none -
fig|6666666.67444.peg.1453 CDS gi|387982770|gb|AJVH01000012.1| 213278 212448 -2 - 831 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1454 CDS gi|387982770|gb|AJVH01000012.1| 213791 213537 -2 - 255 transposase remnant - none -
fig|6666666.67444.peg.1455 CDS gi|387982770|gb|AJVH01000012.1| 214720 214013 -1 - 708 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67444.peg.1456 CDS gi|387982770|gb|AJVH01000012.1| 214845 216425 3 + 1581 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67444.peg.1457 CDS gi|387982770|gb|AJVH01000012.1| 216447 217256 3 + 810 FIG00547507: hypothetical protein - none -
fig|6666666.67444.peg.1458 CDS gi|387982770|gb|AJVH01000012.1| 217306 218118 1 + 813 FIG00544678: hypothetical protein - none -
fig|6666666.67444.peg.1459 CDS gi|387982770|gb|AJVH01000012.1| 218178 218303 3 + 126 hypothetical protein - none -
fig|6666666.67444.peg.1460 CDS gi|387982770|gb|AJVH01000012.1| 218974 219474 1 + 501 putative aldose-1-epimerase - none -
fig|6666666.67444.peg.1461 CDS gi|387982770|gb|AJVH01000012.1| 219526 219891 1 + 366 putative aldose-1-epimerase - none -
fig|6666666.67444.peg.1462 CDS gi|387982770|gb|AJVH01000012.1| 219928 221586 1 + 1659 Predicted sodium-dependent galactose transporter - none -
fig|6666666.67444.peg.1463 CDS gi|387982770|gb|AJVH01000012.1| 221599 221880 1 + 282 FIG00547530: hypothetical protein - none -
fig|6666666.67444.peg.1464 CDS gi|387982770|gb|AJVH01000012.1| 221880 223010 3 + 1131 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.67444.peg.1465 CDS gi|387982770|gb|AJVH01000012.1| 222994 224223 1 + 1230 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67444.peg.1466 CDS gi|387982770|gb|AJVH01000012.1| 227409 224278 -3 - 3132 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.67444.peg.1467 CDS gi|387982770|gb|AJVH01000012.1| 227815 227420 -1 - 396 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67444.peg.1468 CDS gi|387982770|gb|AJVH01000012.1| 228028 230031 1 + 2004 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67444.peg.1469 CDS gi|387982770|gb|AJVH01000012.1| 230119 230529 1 + 411 Putative exported protein - none -
fig|6666666.67444.peg.1470 CDS gi|387982770|gb|AJVH01000012.1| 231134 230658 -2 - 477 FIG00544250: hypothetical protein - none -
fig|6666666.67444.peg.1471 CDS gi|387982770|gb|AJVH01000012.1| 231773 231183 -2 - 591 FIG00544279: hypothetical protein - none -
fig|6666666.67444.peg.1472 CDS gi|387982770|gb|AJVH01000012.1| 233378 231813 -2 - 1566 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.67444.peg.1473 CDS gi|387982770|gb|AJVH01000012.1| 233604 236693 3 + 3090 Helicase, SNF2/RAD54 family - none -
fig|6666666.67444.peg.1474 CDS gi|387982770|gb|AJVH01000012.1| 236694 237515 3 + 822 FIG00545674: hypothetical protein - none -
fig|6666666.67444.peg.1475 CDS gi|387982770|gb|AJVH01000012.1| 237547 238668 1 + 1122 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67444.peg.1476 CDS gi|387982770|gb|AJVH01000012.1| 238668 241232 3 + 2565 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67444.peg.1477 CDS gi|387982770|gb|AJVH01000012.1| 241838 241308 -2 - 531 Protein yceI precursor - none -
fig|6666666.67444.peg.1478 CDS gi|387982770|gb|AJVH01000012.1| 242319 242561 3 + 243 Transcriptional regulator, MarR family - none -
fig|6666666.67444.peg.1479 CDS gi|387982770|gb|AJVH01000012.1| 242733 242867 3 + 135 FIG00543943: hypothetical protein - none -
fig|6666666.67444.peg.1480 CDS gi|387982770|gb|AJVH01000012.1| 243833 243204 -2 - 630 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.67444.peg.1481 CDS gi|387982770|gb|AJVH01000012.1| 245352 243835 -3 - 1518 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.67444.peg.1482 CDS gi|387982770|gb|AJVH01000012.1| 246161 245376 -2 - 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.67444.peg.1483 CDS gi|387982770|gb|AJVH01000012.1| 246601 248259 1 + 1659 L-lactate permease Lactate utilization
fig|6666666.67444.peg.1484 CDS gi|387982770|gb|AJVH01000012.1| 248271 249923 3 + 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67444.peg.1485 CDS gi|387982770|gb|AJVH01000012.1| 249926 251254 2 + 1329 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67444.peg.1486 CDS gi|387982770|gb|AJVH01000012.1| 251426 252772 2 + 1347 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67444.peg.1487 CDS gi|387982770|gb|AJVH01000012.1| 252777 253703 3 + 927 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67444.peg.1488 CDS gi|387982770|gb|AJVH01000012.1| 255504 253765 -3 - 1740 acyl-CoA synthetase - none -
fig|6666666.67444.peg.1489 CDS gi|387982770|gb|AJVH01000012.1| 255594 255815 3 + 222 hypothetical protein - none -
fig|6666666.67444.peg.1490 CDS gi|387982770|gb|AJVH01000012.1| 255866 257938 2 + 2073 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67444.peg.1491 CDS gi|387982770|gb|AJVH01000012.1| 257938 259008 1 + 1071 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.67444.peg.1492 CDS gi|387982770|gb|AJVH01000012.1| 258983 259831 2 + 849 Methylase of polypeptide chain release factors - none -
fig|6666666.67444.peg.1493 CDS gi|387982770|gb|AJVH01000012.1| 259939 260589 1 + 651 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.67444.peg.1494 CDS gi|387982770|gb|AJVH01000012.1| 260590 261759 1 + 1170 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67444.peg.1495 CDS gi|387982770|gb|AJVH01000012.1| 261777 262220 3 + 444 ATP synthase protein I - none -
fig|6666666.67444.peg.1496 CDS gi|387982770|gb|AJVH01000012.1| 262723 262577 -1 - 147 hypothetical protein - none -
fig|6666666.67444.peg.1497 CDS gi|387982770|gb|AJVH01000012.1| 262733 263491 2 + 759 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1498 CDS gi|387982770|gb|AJVH01000012.1| 263577 263816 3 + 240 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1499 CDS gi|387982770|gb|AJVH01000012.1| 263844 264410 3 + 567 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1500 CDS gi|387982770|gb|AJVH01000012.1| 264416 265237 2 + 822 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1501 CDS gi|387982770|gb|AJVH01000012.1| 265298 266926 2 + 1629 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1502 CDS gi|387982770|gb|AJVH01000012.1| 266980 267957 1 + 978 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1503 CDS gi|387982770|gb|AJVH01000012.1| 267961 269406 1 + 1446 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1504 CDS gi|387982770|gb|AJVH01000012.1| 269420 269791 2 + 372 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67444.peg.1505 CDS gi|387982770|gb|AJVH01000012.1| 270018 270485 3 + 468 FIG00544079: hypothetical protein - none -
fig|6666666.67444.peg.1506 CDS gi|387982770|gb|AJVH01000012.1| 270510 271199 3 + 690 FIG00996186: hypothetical protein - none -
fig|6666666.67444.peg.1507 CDS gi|387982770|gb|AJVH01000012.1| 271252 271512 1 + 261 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.67444.peg.1508 CDS gi|387982770|gb|AJVH01000012.1| 272048 271590 -2 - 459 Methylmalonyl-CoA epimerase (EC 5.1.99.1); Ethylmalonyl-CoA epimerase - none -
fig|6666666.67444.peg.1509 CDS gi|387982770|gb|AJVH01000012.1| 272125 272451 1 + 327 FIG00544011: hypothetical protein - none -
fig|6666666.67444.peg.1510 CDS gi|387982770|gb|AJVH01000012.1| 273275 272454 -2 - 822 ABC-type transporter, ATPase component - none -
fig|6666666.67444.peg.1511 CDS gi|387982770|gb|AJVH01000012.1| 274231 273272 -1 - 960 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67444.peg.1512 CDS gi|387982770|gb|AJVH01000012.1| 275168 274233 -2 - 936 hypothetical protein - none -
fig|6666666.67444.peg.1513 CDS gi|387982770|gb|AJVH01000012.1| 275288 276331 2 + 1044 Putative iron-siderophore uptake system exported solute-binding component - none -
fig|6666666.67444.peg.1514 CDS gi|387982770|gb|AJVH01000012.1| 276787 276419 -1 - 369 Putative integral membrane protein - none -
fig|6666666.67444.peg.1515 CDS gi|387982770|gb|AJVH01000012.1| 276964 277860 1 + 897 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67444.peg.1516 CDS gi|387982770|gb|AJVH01000012.1| 277893 278081 3 + 189 hypothetical protein - none -
fig|6666666.67444.peg.1517 CDS gi|387982770|gb|AJVH01000012.1| 280463 278265 -2 - 2199 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67444.peg.1518 CDS gi|387982770|gb|AJVH01000012.1| 282554 280518 -2 - 2037 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.67444.peg.1519 CDS gi|387982770|gb|AJVH01000012.1| 282682 283518 1 + 837 ABC transporter, ATP-binding protein - none -
fig|6666666.67444.peg.1520 CDS gi|387982770|gb|AJVH01000012.1| 283597 284406 1 + 810 FIG00996530: hypothetical protein - none -
fig|6666666.67444.peg.1521 CDS gi|387982770|gb|AJVH01000012.1| 284449 285633 1 + 1185 SAM-dependent methyltransferase - none -
fig|6666666.67444.peg.1522 CDS gi|387982770|gb|AJVH01000012.1| 285809 286603 2 + 795 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.67444.peg.1523 CDS gi|387982770|gb|AJVH01000012.1| 286621 287574 1 + 954 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.67444.peg.1524 CDS gi|387982770|gb|AJVH01000012.1| 287980 287786 -1 - 195 hypothetical protein - none -
fig|6666666.67444.peg.1525 CDS gi|387982770|gb|AJVH01000012.1| 288033 289169 3 + 1137 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67444.peg.1526 CDS gi|387982770|gb|AJVH01000012.1| 290014 289166 -1 - 849 Spermidine synthase-like protein - none -
fig|6666666.67444.peg.1527 CDS gi|387982770|gb|AJVH01000012.1| 290171 291271 2 + 1101 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67444.peg.1528 CDS gi|387982770|gb|AJVH01000012.1| 291300 292367 3 + 1068 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67444.peg.1529 CDS gi|387982770|gb|AJVH01000012.1| 293115 292411 -3 - 705 FIG00544413: hypothetical protein - none -
fig|6666666.67444.peg.1530 CDS gi|387982770|gb|AJVH01000012.1| 293212 295245 1 + 2034 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67444.peg.1531 CDS gi|387982770|gb|AJVH01000012.1| 295970 295308 -2 - 663 FIG00544014: hypothetical protein - none -
fig|6666666.67444.peg.1532 CDS gi|387982770|gb|AJVH01000012.1| 296220 296519 3 + 300 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67444.peg.1533 CDS gi|387982770|gb|AJVH01000012.1| 296519 298003 2 + 1485 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67444.peg.1534 CDS gi|387982770|gb|AJVH01000012.1| 298597 298106 -1 - 492 Putative acetyltransferase - none -
fig|6666666.67444.peg.1535 CDS gi|387982770|gb|AJVH01000012.1| 298661 300076 2 + 1416 permease of the major facilitator superfamily - none -
fig|6666666.67444.peg.1536 CDS gi|387982770|gb|AJVH01000012.1| 300470 300135 -2 - 336 Conserved putative integral membrane protein - none -
fig|6666666.67444.peg.1537 CDS gi|387982770|gb|AJVH01000012.1| 300872 301912 2 + 1041 ABC transporter (iron.B12.siderophore.hemin) , permease component - none -
fig|6666666.67444.peg.1538 CDS gi|387982770|gb|AJVH01000012.1| 301912 302709 1 + 798 Putative iron ABC transport system, ATP-binding protein - none -
fig|6666666.67444.peg.1539 CDS gi|387982770|gb|AJVH01000012.1| 302721 303785 3 + 1065 Putative iron transport system exported solute-binding component - none -
fig|6666666.67444.peg.1540 CDS gi|387982770|gb|AJVH01000012.1| 303893 304600 2 + 708 Putative integral membrane protein containing helix-turn-helix motif - none -
fig|6666666.67444.peg.1541 CDS gi|387982770|gb|AJVH01000012.1| 304800 305828 3 + 1029 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67444.peg.1542 CDS gi|387982770|gb|AJVH01000012.1| 305937 307442 3 + 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67444.peg.1543 CDS gi|387982770|gb|AJVH01000012.1| 307608 308645 3 + 1038 Putative aldo/keto-reductase family protein - none -
fig|6666666.67444.peg.1544 CDS gi|387982770|gb|AJVH01000012.1| 309360 308674 -3 - 687 lysine exporter protein - none -
fig|6666666.67444.peg.1545 CDS gi|387982770|gb|AJVH01000012.1| 309431 310312 2 + 882 lysine export regulator protein - none -
fig|6666666.67444.peg.1546 CDS gi|387982770|gb|AJVH01000012.1| 311378 310323 -2 - 1056 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67444.peg.1547 CDS gi|387982770|gb|AJVH01000012.1| 311543 312229 2 + 687 putative secreted protein - none -
fig|6666666.67444.peg.1548 CDS gi|387982770|gb|AJVH01000012.1| 312309 312575 3 + 267 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67444.peg.1549 CDS gi|387982770|gb|AJVH01000012.1| 312575 313435 2 + 861 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67444.peg.1550 CDS gi|387982770|gb|AJVH01000012.1| 315353 313512 -2 - 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67444.peg.1551 CDS gi|387982770|gb|AJVH01000012.1| 316127 315642 -2 - 486 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67444.peg.1552 CDS gi|387982770|gb|AJVH01000012.1| 316562 318472 2 + 1911 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67444.peg.1553 CDS gi|387982770|gb|AJVH01000012.1| 318488 319012 2 + 525 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67444.peg.1554 CDS gi|387982770|gb|AJVH01000012.1| 319132 320145 1 + 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67444.peg.1555 CDS gi|387982770|gb|AJVH01000012.1| 320283 321218 3 + 936 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67444.peg.1556 CDS gi|387982770|gb|AJVH01000012.1| 321271 323079 1 + 1809 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.67444.peg.1557 CDS gi|387982770|gb|AJVH01000012.1| 323186 324616 2 + 1431 No significant database matches - none -
fig|6666666.67444.peg.1558 CDS gi|387982770|gb|AJVH01000012.1| 324857 326374 2 + 1518 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67444.peg.1559 CDS gi|387982770|gb|AJVH01000012.1| 326515 327051 1 + 537 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67444.peg.1560 CDS gi|387982770|gb|AJVH01000012.1| 327044 327535 2 + 492 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67444.peg.1561 CDS gi|387982770|gb|AJVH01000012.1| 327662 328180 2 + 519 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67444.peg.1562 CDS gi|387982770|gb|AJVH01000012.1| 328473 328850 3 + 378 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67444.peg.1563 CDS gi|387982770|gb|AJVH01000012.1| 328855 328992 1 + 138 hypothetical protein - none -
fig|6666666.67444.peg.1564 CDS gi|387982770|gb|AJVH01000012.1| 328989 329162 3 + 174 hypothetical protein - none -
fig|6666666.67444.peg.1565 CDS gi|387982770|gb|AJVH01000012.1| 329180 329359 2 + 180 hypothetical protein - none -
fig|6666666.67444.peg.1566 CDS gi|387982770|gb|AJVH01000012.1| 329405 329737 2 + 333 Putative integral membrane protein - none -
fig|6666666.67444.peg.1567 CDS gi|387982770|gb|AJVH01000012.1| 329811 330608 3 + 798 Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67444.peg.1568 CDS gi|387982770|gb|AJVH01000012.1| 330700 331275 1 + 576 FIG00547055: hypothetical protein - none -
fig|6666666.67444.peg.1569 CDS gi|387982770|gb|AJVH01000012.1| 332125 331256 -1 - 870 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67444.peg.1570 CDS gi|387982770|gb|AJVH01000012.1| 332526 332401 -3 - 126 hypothetical protein - none -
fig|6666666.67444.peg.1571 CDS gi|387982770|gb|AJVH01000012.1| 332485 333912 1 + 1428 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67444.peg.1572 CDS gi|387982770|gb|AJVH01000012.1| 333957 335108 3 + 1152 FIG00544588: hypothetical protein - none -
fig|6666666.67444.peg.1573 CDS gi|387982770|gb|AJVH01000012.1| 335652 335464 -3 - 189 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.1574 CDS gi|387982770|gb|AJVH01000012.1| 335751 336161 3 + 411 Integral membrane protein, MmpL family - none -
fig|6666666.67444.peg.1575 CDS gi|387982770|gb|AJVH01000012.1| 336319 337014 1 + 696 MMPL domain protein - none -
fig|6666666.67444.peg.1576 CDS gi|387982770|gb|AJVH01000012.1| 337182 338627 3 + 1446 Conserved hypothetical exported protein - none -
fig|6666666.67444.peg.1577 CDS gi|387982770|gb|AJVH01000012.1| 338831 338995 2 + 165 No significant database matches - none -
fig|6666666.67444.peg.1578 CDS gi|387982770|gb|AJVH01000012.1| 339569 342277 2 + 2709 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Fermentations: Mixed acid;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67444.peg.1579 CDS gi|387982770|gb|AJVH01000012.1| 342676 342287 -1 - 390 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.67444.peg.1580 CDS gi|387982770|gb|AJVH01000012.1| 343712 342720 -2 - 993 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67444.peg.1581 CDS gi|387982770|gb|AJVH01000012.1| 343793 344350 2 + 558 FIG00546260: hypothetical protein - none -
fig|6666666.67444.peg.1582 CDS gi|387982770|gb|AJVH01000012.1| 345086 344361 -2 - 726 Transcriptional regulator, IclR family - none -
fig|6666666.67444.peg.1583 CDS gi|387982770|gb|AJVH01000012.1| 345176 346618 2 + 1443 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67444.peg.1584 CDS gi|387982770|gb|AJVH01000012.1| 346630 347220 1 + 591 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67444.peg.1585 CDS gi|387982770|gb|AJVH01000012.1| 348309 347299 -3 - 1011 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67444.peg.1586 CDS gi|387982770|gb|AJVH01000012.1| 348504 349499 3 + 996 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.1587 CDS gi|387982770|gb|AJVH01000012.1| 349522 350619 1 + 1098 D-alanine--D-alanine ligase A (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67444.peg.1588 CDS gi|387982770|gb|AJVH01000012.1| 351564 350626 -3 - 939 Putative exported protein - none -
fig|6666666.67444.peg.1589 CDS gi|387982770|gb|AJVH01000012.1| 351656 352645 2 + 990 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67444.peg.1590 CDS gi|387982770|gb|AJVH01000012.1| 352648 353316 1 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67444.peg.1591 CDS gi|387982770|gb|AJVH01000012.1| 353371 354987 1 + 1617 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67444.peg.1592 CDS gi|387982770|gb|AJVH01000012.1| 354992 357106 2 + 2115 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67444.peg.1593 CDS gi|387982770|gb|AJVH01000012.1| 357134 357355 2 + 222 Pyruvate carboxylase, C-terminal domain/subunit (EC 2.1.3.1) - none -
fig|6666666.67444.peg.1594 CDS gi|387982770|gb|AJVH01000012.1| 357352 357930 1 + 579 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.67444.peg.1595 CDS gi|387982770|gb|AJVH01000012.1| 357938 358417 2 + 480 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.67444.peg.1596 CDS gi|387982770|gb|AJVH01000012.1| 358513 358965 1 + 453 Putative secreted protein - none -
fig|6666666.67444.peg.1597 CDS gi|387982770|gb|AJVH01000012.1| 359753 358986 -2 - 768 ATP-binding protein - none -
fig|6666666.67444.peg.1598 CDS gi|387982770|gb|AJVH01000012.1| 360701 359757 -2 - 945 putative amino acid ABC transporter permease protein - none -
fig|6666666.67444.peg.1599 CDS gi|387982770|gb|AJVH01000012.1| 361652 360759 -2 - 894 Putative secreted protein - none -
fig|6666666.67444.peg.1600 CDS gi|387982770|gb|AJVH01000012.1| 362654 361722 -2 - 933 Putative membrane protein - none -
fig|6666666.67444.peg.1601 CDS gi|387982770|gb|AJVH01000012.1| 363015 365714 3 + 2700 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67444.peg.1602 CDS gi|387982770|gb|AJVH01000012.1| 366528 365764 -3 - 765 SAM-dependent methyltransferases - none -
fig|6666666.67444.peg.1603 CDS gi|387982770|gb|AJVH01000012.1| 366741 366589 -3 - 153 hypothetical protein - none -
fig|6666666.67444.peg.1604 CDS gi|387982770|gb|AJVH01000012.1| 366742 368202 1 + 1461 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.67444.peg.1605 CDS gi|387982770|gb|AJVH01000012.1| 368771 368286 -2 - 486 Putative transport protein - none -
fig|6666666.67444.peg.1606 CDS gi|387982770|gb|AJVH01000012.1| 369699 368848 -3 - 852 Putative transport protein - none -
fig|6666666.67444.peg.1607 CDS gi|387982770|gb|AJVH01000012.1| 370746 369919 -3 - 828 Beta-glucoside bgl operon antiterminator, BglG family - none -
fig|6666666.67444.peg.1608 CDS gi|387982770|gb|AJVH01000012.1| 372888 370858 -3 - 2031 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.67444.peg.1609 CDS gi|387982770|gb|AJVH01000012.1| 373271 373873 2 + 603 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67444.peg.1610 CDS gi|387982770|gb|AJVH01000012.1| 374302 374168 -1 - 135 hypothetical protein - none -
fig|6666666.67444.peg.1611 CDS gi|387982770|gb|AJVH01000012.1| 374433 375290 3 + 858 Radical SAM domain heme biosynthesis protein - none -
fig|6666666.67444.peg.1612 CDS gi|387982770|gb|AJVH01000012.1| 375340 377436 1 + 2097 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67444.peg.1613 CDS gi|387982770|gb|AJVH01000012.1| 377665 378105 1 + 441 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67444.peg.1614 CDS gi|387982770|gb|AJVH01000012.1| 380416 378152 -1 - 2265 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67444.peg.1615 CDS gi|387982770|gb|AJVH01000012.1| 381433 380588 -1 - 846 FIG00995839: hypothetical protein - none -
fig|6666666.67444.peg.1616 CDS gi|387982770|gb|AJVH01000012.1| 382256 381618 -2 - 639 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67444.peg.1617 CDS gi|387982770|gb|AJVH01000012.1| 382419 385280 3 + 2862 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67444.peg.1618 CDS gi|387982770|gb|AJVH01000012.1| 385625 386071 2 + 447 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67444.peg.1619 CDS gi|387982770|gb|AJVH01000012.1| 386101 386295 1 + 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67444.peg.1620 CDS gi|387982770|gb|AJVH01000012.1| 386357 386740 2 + 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67444.peg.1621 CDS gi|387982770|gb|AJVH01000012.1| 386757 386882 3 + 126 hypothetical protein - none -
fig|6666666.67444.peg.1622 CDS gi|387982770|gb|AJVH01000012.1| 387537 386992 -3 - 546 hypothetical protein - none -
fig|6666666.67444.peg.1623 CDS gi|387982770|gb|AJVH01000012.1| 387785 388603 2 + 819 RNA methyltransferase, TrmH family - none -
fig|6666666.67444.peg.1624 CDS gi|387982770|gb|AJVH01000012.1| 388734 389789 3 + 1056 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67444.peg.1625 CDS gi|387982770|gb|AJVH01000012.1| 389831 392341 2 + 2511 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67444.peg.1626 CDS gi|387982770|gb|AJVH01000012.1| 392456 393511 2 + 1056 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67444.peg.1627 CDS gi|387982770|gb|AJVH01000012.1| 393586 394746 1 + 1161 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67444.peg.1628 CDS gi|387982770|gb|AJVH01000012.1| 394783 395715 1 + 933 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67444.peg.1629 CDS gi|387982770|gb|AJVH01000012.1| 395708 396949 2 + 1242 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67444.peg.1630 CDS gi|387982770|gb|AJVH01000012.1| 396978 397484 3 + 507 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67444.peg.1631 CDS gi|387982770|gb|AJVH01000012.1| 397465 397938 1 + 474 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67444.peg.1632 CDS gi|387982770|gb|AJVH01000012.1| 398045 398536 2 + 492 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67444.peg.1633 CDS gi|387982770|gb|AJVH01000012.1| 398694 399893 3 + 1200 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67444.peg.1634 CDS gi|387982770|gb|AJVH01000012.1| 399893 401326 2 + 1434 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67444.peg.1635 CDS gi|387982770|gb|AJVH01000012.1| 401411 401602 2 + 192 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.67444.peg.1636 CDS gi|387982770|gb|AJVH01000012.1| 401616 402878 3 + 1263 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67444.peg.1637 CDS gi|387982770|gb|AJVH01000012.1| 403168 402998 -1 - 171 hypothetical protein - none -
fig|6666666.67444.peg.1638 CDS gi|387983147|gb|AJVH01000011.1| 392 174 -2 - 219 Mobile element protein - none -
fig|6666666.67444.peg.1639 CDS gi|387983147|gb|AJVH01000011.1| 1743 343 -3 - 1401 Putative transposase - none -
fig|6666666.67444.peg.1640 CDS gi|387983147|gb|AJVH01000011.1| 2310 1837 -3 - 474 Mobile element protein - none -
fig|6666666.67444.peg.1641 CDS gi|387983147|gb|AJVH01000011.1| 2285 2422 2 + 138 hypothetical protein - none -
fig|6666666.67444.peg.1642 CDS gi|387983153|gb|AJVH01000010.1| 640 299 -1 - 342 hypothetical protein - none -
fig|6666666.67444.peg.1643 CDS gi|387983153|gb|AJVH01000010.1| 1354 674 -1 - 681 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67444.peg.1644 CDS gi|387983153|gb|AJVH01000010.1| 1884 1759 -3 - 126 hypothetical protein - none -
fig|6666666.67444.peg.1645 CDS gi|387983159|gb|AJVH01000009.1| 427 305 -1 - 123 Putative membrane protein - none -
fig|6666666.67444.peg.1646 CDS gi|387983159|gb|AJVH01000009.1| 1809 739 -3 - 1071 FIG00544165: hypothetical protein - none -
fig|6666666.67444.peg.1647 CDS gi|387983159|gb|AJVH01000009.1| 2768 1812 -2 - 957 Putative membrane protein - none -
fig|6666666.67444.peg.1648 CDS gi|387983159|gb|AJVH01000009.1| 3030 3143 3 + 114 hypothetical protein - none -
fig|6666666.67444.peg.1649 CDS gi|387983159|gb|AJVH01000009.1| 3420 4880 3 + 1461 Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67444.peg.1650 CDS gi|387983159|gb|AJVH01000009.1| 4893 6449 3 + 1557 Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67444.peg.1651 CDS gi|387983159|gb|AJVH01000009.1| 6463 6726 1 + 264 Clusters with Methylmalonyl-CoA carboxyltransferase (EC 2.1.3.1) - none -
fig|6666666.67444.peg.1652 CDS gi|387983159|gb|AJVH01000009.1| 6751 7119 1 + 369 Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67444.peg.1653 CDS gi|387983159|gb|AJVH01000009.1| 7322 8413 2 + 1092 No significant database matches - none -
fig|6666666.67444.peg.1654 CDS gi|387983159|gb|AJVH01000009.1| 9220 8432 -1 - 789 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67444.peg.1655 CDS gi|387983159|gb|AJVH01000009.1| 10148 9276 -2 - 873 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67444.peg.1656 CDS gi|387983159|gb|AJVH01000009.1| 10271 11380 2 + 1110 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67444.peg.1657 CDS gi|387983159|gb|AJVH01000009.1| 12822 11377 -3 - 1446 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.67444.peg.1658 CDS gi|387983159|gb|AJVH01000009.1| 13103 13792 2 + 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67444.peg.1659 CDS gi|387983159|gb|AJVH01000009.1| 13809 14711 3 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67444.peg.1660 CDS gi|387983159|gb|AJVH01000009.1| 14818 15309 1 + 492 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67444.peg.1661 CDS gi|387983189|gb|AJVH01000008.1| 337 489 1 + 153 hypothetical protein - none -
fig|6666666.67444.peg.1662 CDS gi|387983189|gb|AJVH01000008.1| 2301 649 -3 - 1653 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.1663 CDS gi|387983189|gb|AJVH01000008.1| 2431 2760 1 + 330 Putative secreted hydrolase - none -
fig|6666666.67444.peg.1664 CDS gi|387983189|gb|AJVH01000008.1| 2843 3220 2 + 378 Putative secreted hydrolase - none -
fig|6666666.67444.peg.1665 CDS gi|387983189|gb|AJVH01000008.1| 4056 3184 -3 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67444.peg.1666 CDS gi|387983189|gb|AJVH01000008.1| 5414 4068 -2 - 1347 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.67444.peg.1667 CDS gi|387983189|gb|AJVH01000008.1| 6460 5453 -1 - 1008 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67444.peg.1668 CDS gi|387983189|gb|AJVH01000008.1| 7740 6466 -3 - 1275 aminopeptidase N - none -
fig|6666666.67444.peg.1669 CDS gi|387983189|gb|AJVH01000008.1| 9809 7815 -2 - 1995 Putative prolyl oligopeptidase family protein - none -
fig|6666666.67444.peg.1670 CDS gi|387983189|gb|AJVH01000008.1| 10965 9898 -3 - 1068 FIG00544202: hypothetical protein - none -
fig|6666666.67444.peg.1671 CDS gi|387983189|gb|AJVH01000008.1| 11433 12842 3 + 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.67444.peg.1672 CDS gi|387983189|gb|AJVH01000008.1| 14469 13051 -3 - 1419 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.67444.peg.1673 CDS gi|387983189|gb|AJVH01000008.1| 14926 15684 1 + 759 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67444.peg.1674 CDS gi|387983189|gb|AJVH01000008.1| 15703 17718 1 + 2016 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67444.peg.1675 CDS gi|387983189|gb|AJVH01000008.1| 17718 18467 3 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67444.peg.1676 CDS gi|387983189|gb|AJVH01000008.1| 18604 18894 1 + 291 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.67444.peg.1677 CDS gi|387983189|gb|AJVH01000008.1| 19093 20361 1 + 1269 FIG00544632: hypothetical protein - none -
fig|6666666.67444.peg.1678 CDS gi|387983189|gb|AJVH01000008.1| 20374 20649 1 + 276 FIG00544701: hypothetical protein - none -
fig|6666666.67444.peg.1679 CDS gi|387983189|gb|AJVH01000008.1| 20689 21144 1 + 456 FIG01282775: hypothetical protein - none -
fig|6666666.67444.peg.1680 CDS gi|387983189|gb|AJVH01000008.1| 21884 21141 -2 - 744 FIG00544979: hypothetical protein - none -
fig|6666666.67444.peg.1681 CDS gi|387983189|gb|AJVH01000008.1| 22765 21890 -1 - 876 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.67444.peg.1682 CDS gi|387983189|gb|AJVH01000008.1| 23095 22844 -1 - 252 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.67444.peg.1683 CDS gi|387983189|gb|AJVH01000008.1| 25241 23145 -2 - 2097 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.67444.peg.1684 CDS gi|387983189|gb|AJVH01000008.1| 26405 25593 -2 - 813 Uncharacterized protein SCO4203 - none -
fig|6666666.67444.peg.1685 CDS gi|387983189|gb|AJVH01000008.1| 26924 26421 -2 - 504 FIG00546961: hypothetical protein - none -
fig|6666666.67444.peg.1686 CDS gi|387983189|gb|AJVH01000008.1| 26948 28051 2 + 1104 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67444.peg.1687 CDS gi|387983189|gb|AJVH01000008.1| 29824 28118 -1 - 1707 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.1688 CDS gi|387983189|gb|AJVH01000008.1| 31586 29886 -2 - 1701 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.1689 CDS gi|387983189|gb|AJVH01000008.1| 31670 32953 2 + 1284 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67444.peg.1690 CDS gi|387983189|gb|AJVH01000008.1| 33012 33758 3 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67444.peg.1691 CDS gi|387983189|gb|AJVH01000008.1| 33770 34924 2 + 1155 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67444.peg.1692 CDS gi|387983189|gb|AJVH01000008.1| 34924 35604 1 + 681 Phosphate regulon transcriptional regulatory protein PhoB (SphR); Sensory transduction protein regX3 High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67444.peg.1693 CDS gi|387983189|gb|AJVH01000008.1| 36436 35567 -1 - 870 FIG00543972: hypothetical protein - none -
fig|6666666.67444.peg.1694 CDS gi|387983189|gb|AJVH01000008.1| 36689 37312 2 + 624 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.67444.peg.1695 CDS gi|387983189|gb|AJVH01000008.1| 37346 38158 2 + 813 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67444.peg.1696 CDS gi|387983189|gb|AJVH01000008.1| 38414 38605 2 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67444.peg.1697 CDS gi|387983189|gb|AJVH01000008.1| 38667 38894 3 + 228 conserved hypothetical 1 TMS, 30-80aa Actinobacteria protein - none -
fig|6666666.67444.peg.1698 CDS gi|387983189|gb|AJVH01000008.1| 38973 39842 3 + 870 Putative secreted protein - none -
fig|6666666.67444.peg.1699 CDS gi|387983189|gb|AJVH01000008.1| 40851 39808 -3 - 1044 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67444.peg.1700 CDS gi|387983189|gb|AJVH01000008.1| 40923 41159 3 + 237 Glutaredoxin-like domain protein - none -
fig|6666666.67444.peg.1701 CDS gi|387983189|gb|AJVH01000008.1| 41276 42592 2 + 1317 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1702 CDS gi|387983189|gb|AJVH01000008.1| 42589 43473 1 + 885 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1703 CDS gi|387983189|gb|AJVH01000008.1| 43546 45204 1 + 1659 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1704 CDS gi|387983189|gb|AJVH01000008.1| 45201 46193 3 + 993 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.67444.peg.1705 CDS gi|387983189|gb|AJVH01000008.1| 46207 46689 1 + 483 FIG00543961: hypothetical protein - none -
fig|6666666.67444.peg.1706 CDS gi|387983189|gb|AJVH01000008.1| 46682 49198 2 + 2517 FUPA26 P-type ATPase - none -
fig|6666666.67444.peg.1707 CDS gi|387983189|gb|AJVH01000008.1| 50294 49176 -2 - 1119 Putative membrane protein - none -
fig|6666666.67444.peg.1708 CDS gi|387983189|gb|AJVH01000008.1| 50357 51394 2 + 1038 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1709 CDS gi|387983189|gb|AJVH01000008.1| 51410 52762 2 + 1353 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1710 CDS gi|387983189|gb|AJVH01000008.1| 52818 54110 3 + 1293 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67444.peg.1711 CDS gi|387983189|gb|AJVH01000008.1| 54107 54715 2 + 609 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67444.peg.1712 CDS gi|387983189|gb|AJVH01000008.1| 54716 55276 2 + 561 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67444.peg.1713 CDS gi|387983189|gb|AJVH01000008.1| 55273 56064 1 + 792 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67444.peg.1714 CDS gi|387983189|gb|AJVH01000008.1| 56076 57665 3 + 1590 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67444.peg.1715 CDS gi|387983189|gb|AJVH01000008.1| 57674 58573 2 + 900 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67444.peg.1716 CDS gi|387983189|gb|AJVH01000008.1| 58686 58570 -3 - 117 putative transcription repressor - none -
fig|6666666.67444.peg.1717 CDS gi|387983189|gb|AJVH01000008.1| 59067 58879 -3 - 189 FIG00544106: hypothetical protein - none -
fig|6666666.67444.peg.1718 CDS gi|387983189|gb|AJVH01000008.1| 59096 59407 2 + 312 FIG00544880: hypothetical protein - none -
fig|6666666.67444.peg.1719 CDS gi|387983189|gb|AJVH01000008.1| 60245 59382 -2 - 864 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67444.peg.1720 CDS gi|387983189|gb|AJVH01000008.1| 60387 61496 3 + 1110 No significant database matches - none -
fig|6666666.67444.peg.1721 CDS gi|387983189|gb|AJVH01000008.1| 62565 61456 -3 - 1110 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67444.peg.1722 CDS gi|387983189|gb|AJVH01000008.1| 63442 62576 -1 - 867 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67444.peg.1723 CDS gi|387983189|gb|AJVH01000008.1| 63465 64409 3 + 945 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67444.peg.1724 CDS gi|387983189|gb|AJVH01000008.1| 64393 65922 1 + 1530 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67444.peg.1725 CDS gi|387983189|gb|AJVH01000008.1| 65985 66311 3 + 327 FIG00543979: hypothetical protein - none -
fig|6666666.67444.peg.1726 CDS gi|387983189|gb|AJVH01000008.1| 66308 67312 2 + 1005 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67444.peg.1727 CDS gi|387983189|gb|AJVH01000008.1| 67305 67979 3 + 675 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67444.peg.1728 CDS gi|387983189|gb|AJVH01000008.1| 68952 67966 -3 - 987 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.67444.peg.1729 CDS gi|387983189|gb|AJVH01000008.1| 70087 68927 -1 - 1161 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67444.peg.1730 CDS gi|387983189|gb|AJVH01000008.1| 70211 71203 2 + 993 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67444.peg.1731 CDS gi|387983189|gb|AJVH01000008.1| 71914 72219 1 + 306 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67444.peg.1732 CDS gi|387983189|gb|AJVH01000008.1| 72314 73105 2 + 792 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67444.peg.1733 CDS gi|387983189|gb|AJVH01000008.1| 73250 73678 2 + 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67444.peg.1734 CDS gi|387983189|gb|AJVH01000008.1| 73745 74452 2 + 708 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67444.peg.1735 CDS gi|387983189|gb|AJVH01000008.1| 74764 75279 1 + 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67444.peg.1736 CDS gi|387983189|gb|AJVH01000008.1| 75323 75703 2 + 381 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67444.peg.1737 CDS gi|387983189|gb|AJVH01000008.1| 75838 77298 1 + 1461 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67444.peg.1738 CDS gi|387983189|gb|AJVH01000008.1| 77299 78195 1 + 897 FIG00545006: hypothetical protein - none -
fig|6666666.67444.peg.1739 CDS gi|387983189|gb|AJVH01000008.1| 78221 78916 2 + 696 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67444.peg.1740 CDS gi|387983189|gb|AJVH01000008.1| 78918 79781 3 + 864 ABC transporter component, possibly Mn transport - none -
fig|6666666.67444.peg.1741 CDS gi|387983189|gb|AJVH01000008.1| 79834 81756 1 + 1923 FIG00547085: hypothetical protein - none -
fig|6666666.67444.peg.1742 CDS gi|387983189|gb|AJVH01000008.1| 81774 82628 3 + 855 FIG00548024: hypothetical protein - none -
fig|6666666.67444.peg.1743 CDS gi|387983189|gb|AJVH01000008.1| 82606 83652 1 + 1047 Putative membrane protein - none -
fig|6666666.67444.peg.1744 CDS gi|387983189|gb|AJVH01000008.1| 83657 84595 2 + 939 FIG00545886: hypothetical protein - none -
fig|6666666.67444.peg.1745 CDS gi|387983189|gb|AJVH01000008.1| 84756 88286 3 + 3531 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67444.peg.1746 CDS gi|387983189|gb|AJVH01000008.1| 88334 92344 2 + 4011 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67444.peg.1747 CDS gi|387983189|gb|AJVH01000008.1| 92535 92657 3 + 123 hypothetical protein - none -
fig|6666666.67444.peg.1748 CDS gi|387983189|gb|AJVH01000008.1| 93374 92658 -2 - 717 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67444.peg.1749 CDS gi|387983189|gb|AJVH01000008.1| 94765 93374 -1 - 1392 hypothetical protein - none -
fig|6666666.67444.peg.1750 CDS gi|387983189|gb|AJVH01000008.1| 96475 95537 -1 - 939 radical SAM domain protein - none -
fig|6666666.67444.peg.1751 CDS gi|387983189|gb|AJVH01000008.1| 96527 96682 2 + 156 hypothetical protein - none -
fig|6666666.67444.peg.1752 CDS gi|387983189|gb|AJVH01000008.1| 97207 97374 1 + 168 Mobile element protein - none -
fig|6666666.67444.peg.1753 CDS gi|387983189|gb|AJVH01000008.1| 97892 97599 -2 - 294 hypothetical protein - none -
fig|6666666.67444.peg.1754 CDS gi|387983189|gb|AJVH01000008.1| 98368 98009 -1 - 360 hypothetical protein - none -
fig|6666666.67444.peg.1755 CDS gi|387983189|gb|AJVH01000008.1| 99017 98553 -2 - 465 No significant database matches - none -
fig|6666666.67444.peg.1756 CDS gi|387983189|gb|AJVH01000008.1| 99517 99110 -1 - 408 No significant database matches - none -
fig|6666666.67444.peg.1757 CDS gi|387983189|gb|AJVH01000008.1| 99829 100917 1 + 1089 Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.1758 CDS gi|387983189|gb|AJVH01000008.1| 100922 101617 2 + 696 Hemoglobin, heme-dependent two component system response regulator ChrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.1759 CDS gi|387983189|gb|AJVH01000008.1| 101674 102624 1 + 951 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67444.peg.1760 CDS gi|387983189|gb|AJVH01000008.1| 102645 103412 3 + 768 Putative ABc transport system integral membrane protein - none -
fig|6666666.67444.peg.1761 CDS gi|387983189|gb|AJVH01000008.1| 103428 104099 3 + 672 Putative membrane protein - none -
fig|6666666.67444.peg.1762 CDS gi|387983189|gb|AJVH01000008.1| 104096 105034 2 + 939 Putative membrane protein - none -
fig|6666666.67444.peg.1763 CDS gi|387983189|gb|AJVH01000008.1| 105474 105031 -3 - 444 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.67444.peg.1764 CDS gi|387983189|gb|AJVH01000008.1| 107404 105620 -1 - 1785 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.67444.peg.1765 CDS gi|387983189|gb|AJVH01000008.1| 107562 107915 3 + 354 No significant database matches - none -
fig|6666666.67444.peg.1766 CDS gi|387983189|gb|AJVH01000008.1| 108190 108561 1 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67444.peg.1767 CDS gi|387983189|gb|AJVH01000008.1| 108565 109032 1 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67444.peg.1768 CDS gi|387983189|gb|AJVH01000008.1| 109285 111411 1 + 2127 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67444.peg.1769 CDS gi|387983189|gb|AJVH01000008.1| 111764 111651 -2 - 114 hypothetical protein - none -
fig|6666666.67444.peg.1770 CDS gi|387983189|gb|AJVH01000008.1| 111729 112919 3 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67444.peg.1771 CDS gi|387983189|gb|AJVH01000008.1| 112997 113554 2 + 558 Conserved membrane-associated protein - none -
fig|6666666.67444.peg.1772 CDS gi|387983189|gb|AJVH01000008.1| 114066 114371 3 + 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.67444.peg.1773 CDS gi|387983189|gb|AJVH01000008.1| 114404 115060 2 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67444.peg.1774 CDS gi|387983189|gb|AJVH01000008.1| 115057 115710 1 + 654 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67444.peg.1775 CDS gi|387983189|gb|AJVH01000008.1| 115710 116015 3 + 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67444.peg.1776 CDS gi|387983189|gb|AJVH01000008.1| 116037 116879 3 + 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67444.peg.1777 CDS gi|387983189|gb|AJVH01000008.1| 116896 117174 1 + 279 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.67444.peg.1778 CDS gi|387983189|gb|AJVH01000008.1| 117178 117540 1 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67444.peg.1779 CDS gi|387983189|gb|AJVH01000008.1| 117540 118286 3 + 747 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.67444.peg.1780 CDS gi|387983189|gb|AJVH01000008.1| 118290 118706 3 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67444.peg.1781 CDS gi|387983189|gb|AJVH01000008.1| 118706 118936 2 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67444.peg.1782 CDS gi|387983189|gb|AJVH01000008.1| 118939 119217 1 + 279 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.67444.peg.1783 CDS gi|387983189|gb|AJVH01000008.1| 119388 121025 3 + 1638 Putative secreted protein - none -
fig|6666666.67444.peg.1784 CDS gi|387983189|gb|AJVH01000008.1| 121042 121758 1 + 717 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67444.peg.1785 CDS gi|387983189|gb|AJVH01000008.1| 121755 123065 3 + 1311 hypothetical protein - none -
fig|6666666.67444.peg.1786 CDS gi|387983189|gb|AJVH01000008.1| 123261 123629 3 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67444.peg.1787 CDS gi|387983189|gb|AJVH01000008.1| 123632 123946 2 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67444.peg.1788 CDS gi|387983189|gb|AJVH01000008.1| 123949 124512 1 + 564 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67444.peg.1789 CDS gi|387983189|gb|AJVH01000008.1| 125354 125220 -2 - 135 hypothetical protein - none -
fig|6666666.67444.peg.1790 CDS gi|387983189|gb|AJVH01000008.1| 125368 126558 1 + 1191 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67444.peg.1791 CDS gi|387983189|gb|AJVH01000008.1| 126583 127959 1 + 1377 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67444.peg.1792 CDS gi|387983189|gb|AJVH01000008.1| 128038 129066 1 + 1029 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67444.peg.1793 CDS gi|387983189|gb|AJVH01000008.1| 130129 129080 -1 - 1050 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67444.peg.1794 CDS gi|387983189|gb|AJVH01000008.1| 131124 130129 -3 - 996 hypothetical protein - none -
fig|6666666.67444.peg.1795 CDS gi|387983189|gb|AJVH01000008.1| 131200 131469 1 + 270 hypothetical protein - none -
fig|6666666.67444.peg.1796 CDS gi|387983189|gb|AJVH01000008.1| 132163 131420 -1 - 744 FIG00544995: hypothetical protein - none -
fig|6666666.67444.peg.1797 CDS gi|387983189|gb|AJVH01000008.1| 134072 132177 -2 - 1896 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) / Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.67444.peg.1798 CDS gi|387983189|gb|AJVH01000008.1| 134837 134088 -2 - 750 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67444.peg.1799 CDS gi|387983189|gb|AJVH01000008.1| 135641 134862 -2 - 780 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67444.peg.1800 CDS gi|387983189|gb|AJVH01000008.1| 136254 135655 -3 - 600 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67444.peg.1801 CDS gi|387983189|gb|AJVH01000008.1| 137937 136336 -3 - 1602 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67444.peg.1802 CDS gi|387983189|gb|AJVH01000008.1| 141659 137937 -2 - 3723 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67444.peg.1803 CDS gi|387983189|gb|AJVH01000008.1| 143034 141703 -3 - 1332 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67444.peg.1804 CDS gi|387983189|gb|AJVH01000008.1| 144667 143369 -1 - 1299 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67444.peg.1805 CDS gi|387983189|gb|AJVH01000008.1| 144921 145415 3 + 495 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67444.peg.1806 CDS gi|387983189|gb|AJVH01000008.1| 146026 145412 -1 - 615 FIG00546849: hypothetical protein - none -
fig|6666666.67444.peg.1807 CDS gi|387983189|gb|AJVH01000008.1| 146471 146004 -2 - 468 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67444.peg.1808 CDS gi|387983189|gb|AJVH01000008.1| 147713 146487 -2 - 1227 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67444.peg.1809 CDS gi|387983189|gb|AJVH01000008.1| 148768 147737 -1 - 1032 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67444.peg.1810 CDS gi|387983189|gb|AJVH01000008.1| 149993 150145 2 + 153 hypothetical protein - none -
fig|6666666.67444.peg.1811 CDS gi|387983189|gb|AJVH01000008.1| 151521 150601 -3 - 921 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67444.peg.1812 CDS gi|387983189|gb|AJVH01000008.1| 152388 151555 -3 - 834 FIG00547092: hypothetical protein - none -
fig|6666666.67444.peg.1813 CDS gi|387983189|gb|AJVH01000008.1| 154382 152394 -2 - 1989 FIG00544816: hypothetical protein - none -
fig|6666666.67444.peg.1814 CDS gi|387983189|gb|AJVH01000008.1| 155347 154382 -1 - 966 ABC-type transporter, permease component - none -
fig|6666666.67444.peg.1815 CDS gi|387983189|gb|AJVH01000008.1| 155411 155533 2 + 123 hypothetical protein - none -
fig|6666666.67444.peg.1816 CDS gi|387983189|gb|AJVH01000008.1| 157212 155590 -3 - 1623 Putative transport system secreted protein - none -
fig|6666666.67444.peg.1817 CDS gi|387983189|gb|AJVH01000008.1| 157548 158288 3 + 741 Transcriptional regulator, GntR family - none -
fig|6666666.67444.peg.1818 CDS gi|387983189|gb|AJVH01000008.1| 158305 159189 1 + 885 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.67444.peg.1819 CDS gi|387983189|gb|AJVH01000008.1| 159218 159913 2 + 696 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.67444.peg.1820 CDS gi|387983189|gb|AJVH01000008.1| 159949 161085 1 + 1137 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67444.peg.1821 CDS gi|387983189|gb|AJVH01000008.1| 161119 161898 1 + 780 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67444.peg.1822 CDS gi|387983189|gb|AJVH01000008.1| 163994 161958 -2 - 2037 Putative membrane protein - none -
fig|6666666.67444.peg.1823 CDS gi|387983189|gb|AJVH01000008.1| 165093 164092 -3 - 1002 Putative membrane protein - none -
fig|6666666.67444.peg.1824 CDS gi|387983189|gb|AJVH01000008.1| 165558 165956 3 + 399 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.67444.peg.1825 CDS gi|387983189|gb|AJVH01000008.1| 165972 166508 3 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67444.peg.1826 CDS gi|387983189|gb|AJVH01000008.1| 166511 166918 2 + 408 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67444.peg.1827 CDS gi|387983189|gb|AJVH01000008.1| 166959 167585 3 + 627 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.67444.peg.1828 CDS gi|387983189|gb|AJVH01000008.1| 167589 167774 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67444.peg.1829 CDS gi|387983189|gb|AJVH01000008.1| 167777 168223 2 + 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67444.peg.1830 CDS gi|387983189|gb|AJVH01000008.1| 168401 169201 2 + 801 Formate-nitrate transporter - none -
fig|6666666.67444.peg.1831 CDS gi|387983189|gb|AJVH01000008.1| 169936 169202 -1 - 735 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67444.peg.1832 CDS gi|387983189|gb|AJVH01000008.1| 171633 169924 -3 - 1710 Alpha-glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.1833 CDS gi|387983189|gb|AJVH01000008.1| 173234 171636 -2 - 1599 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.67444.peg.1834 CDS gi|387983189|gb|AJVH01000008.1| 173206 173328 1 + 123 hypothetical protein - none -
fig|6666666.67444.peg.1835 CDS gi|387983189|gb|AJVH01000008.1| 173659 174894 1 + 1236 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.1836 CDS gi|387983189|gb|AJVH01000008.1| 175012 176415 1 + 1404 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.1837 CDS gi|387983189|gb|AJVH01000008.1| 176415 177293 3 + 879 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.1838 CDS gi|387983189|gb|AJVH01000008.1| 177377 178099 2 + 723 Putative ABC transport system membrane protein - none -
fig|6666666.67444.peg.1839 CDS gi|387983189|gb|AJVH01000008.1| 179349 178096 -3 - 1254 Chromosome segregation ATPases - none -
fig|6666666.67444.peg.1840 CDS gi|387983189|gb|AJVH01000008.1| 180600 179464 -3 - 1137 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67444.peg.1841 CDS gi|387983189|gb|AJVH01000008.1| 181089 182411 3 + 1323 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67444.peg.1842 CDS gi|387983189|gb|AJVH01000008.1| 182411 182956 2 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67444.peg.1843 CDS gi|387983189|gb|AJVH01000008.1| 183070 183864 1 + 795 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67444.peg.1844 CDS gi|387983189|gb|AJVH01000008.1| 184203 186398 3 + 2196 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.67444.peg.1845 CDS gi|387983189|gb|AJVH01000008.1| 186531 187271 3 + 741 Putative secreted protein - none -
fig|6666666.67444.peg.1846 CDS gi|387983189|gb|AJVH01000008.1| 187536 187390 -3 - 147 hypothetical protein - none -
fig|6666666.67444.peg.1847 CDS gi|387983189|gb|AJVH01000008.1| 187567 187794 1 + 228 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67444.peg.1848 CDS gi|387983189|gb|AJVH01000008.1| 187980 188348 3 + 369 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.67444.peg.1849 CDS gi|387983189|gb|AJVH01000008.1| 188352 188756 3 + 405 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.67444.peg.1850 CDS gi|387983189|gb|AJVH01000008.1| 188780 189385 2 + 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.67444.peg.1851 CDS gi|387983189|gb|AJVH01000008.1| 189467 190483 2 + 1017 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67444.peg.1852 CDS gi|387983189|gb|AJVH01000008.1| 190564 191037 1 + 474 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67444.peg.1853 CDS gi|387983189|gb|AJVH01000008.1| 191152 192018 1 + 867 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67444.peg.1854 CDS gi|387983189|gb|AJVH01000008.1| 192161 193459 2 + 1299 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67444.peg.1855 CDS gi|387983189|gb|AJVH01000008.1| 193568 193990 2 + 423 FIG00544350: hypothetical protein - none -
fig|6666666.67444.peg.1856 CDS gi|387983189|gb|AJVH01000008.1| 195116 193971 -2 - 1146 subtilase family protein - none -
fig|6666666.67444.peg.1857 CDS gi|387983189|gb|AJVH01000008.1| 196544 195129 -2 - 1416 FIG00544388: hypothetical protein - none -
fig|6666666.67444.peg.1858 CDS gi|387983189|gb|AJVH01000008.1| 196598 196714 2 + 117 hypothetical protein - none -
fig|6666666.67444.peg.1859 CDS gi|387983189|gb|AJVH01000008.1| 196821 196964 3 + 144 FtsK/SpoIIIE family protein - none -
fig|6666666.67444.peg.1860 CDS gi|387983189|gb|AJVH01000008.1| 196939 200340 1 + 3402 FtsK/SpoIIIE family protein - none -
fig|6666666.67444.peg.1861 CDS gi|387983189|gb|AJVH01000008.1| 200404 201393 1 + 990 FIG00543916: hypothetical protein - none -
fig|6666666.67444.peg.1862 CDS gi|387983189|gb|AJVH01000008.1| 201596 201913 2 + 318 FIG00543840: hypothetical protein - none -
fig|6666666.67444.peg.1863 CDS gi|387983189|gb|AJVH01000008.1| 201958 202245 1 + 288 FIG00544893: hypothetical protein - none -
fig|6666666.67444.peg.1864 CDS gi|387983189|gb|AJVH01000008.1| 202429 202271 -1 - 159 hypothetical protein - none -
fig|6666666.67444.peg.1865 CDS gi|387983189|gb|AJVH01000008.1| 202670 203113 2 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67444.peg.1866 CDS gi|387983189|gb|AJVH01000008.1| 203110 203643 1 + 534 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.67444.peg.1867 CDS gi|387983189|gb|AJVH01000008.1| 203801 203673 -2 - 129 hypothetical protein - none -
fig|6666666.67444.peg.1868 CDS gi|387983189|gb|AJVH01000008.1| 203803 205155 1 + 1353 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67444.peg.1869 CDS gi|387983189|gb|AJVH01000008.1| 205260 205559 3 + 300 FIG00544418: hypothetical protein - none -
fig|6666666.67444.peg.1870 CDS gi|387983189|gb|AJVH01000008.1| 205556 206875 2 + 1320 No significant database matches. High concentration of alanine, glycine and proline residues - none -
fig|6666666.67444.peg.1871 CDS gi|387983189|gb|AJVH01000008.1| 206869 207129 1 + 261 FIG00546731: hypothetical protein - none -
fig|6666666.67444.peg.1872 CDS gi|387983189|gb|AJVH01000008.1| 208011 207148 -3 - 864 FIG00545792: hypothetical protein - none -
fig|6666666.67444.peg.1873 CDS gi|387983189|gb|AJVH01000008.1| 208173 209321 3 + 1149 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67444.peg.1874 CDS gi|387983189|gb|AJVH01000008.1| 209328 209822 3 + 495 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67444.peg.1875 CDS gi|387983189|gb|AJVH01000008.1| 210009 211694 3 + 1686 putative transport protein - none -
fig|6666666.67444.peg.1876 CDS gi|387983189|gb|AJVH01000008.1| 211841 212314 2 + 474 FIG00546178: hypothetical protein - none -
fig|6666666.67444.peg.1877 CDS gi|387983189|gb|AJVH01000008.1| 212382 213050 3 + 669 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.67444.peg.1878 CDS gi|387983189|gb|AJVH01000008.1| 213051 213542 3 + 492 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Ribosome biogenesis bacterial
fig|6666666.67444.peg.1879 CDS gi|387983189|gb|AJVH01000008.1| 213543 214595 3 + 1053 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.67444.peg.1880 CDS gi|387983189|gb|AJVH01000008.1| 214737 215033 3 + 297 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67444.peg.1881 CDS gi|387983189|gb|AJVH01000008.1| 215046 216665 3 + 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67444.peg.1882 CDS gi|387983189|gb|AJVH01000008.1| 216865 217431 1 + 567 putative RNA polymerase sigma factor - none -
fig|6666666.67444.peg.1883 CDS gi|387983189|gb|AJVH01000008.1| 217428 218330 3 + 903 FIG00544252: hypothetical protein - none -
fig|6666666.67444.peg.1884 CDS gi|387983189|gb|AJVH01000008.1| 218789 218403 -2 - 387 FIG00544572: hypothetical protein - none -
fig|6666666.67444.peg.1885 CDS gi|387983189|gb|AJVH01000008.1| 218946 220466 3 + 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67444.peg.1886 CDS gi|387983189|gb|AJVH01000008.1| 220494 221639 3 + 1146 Inosine-5@1-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67444.peg.1887 CDS gi|387983189|gb|AJVH01000008.1| 221770 222666 1 + 897 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.67444.peg.1888 CDS gi|387983189|gb|AJVH01000008.1| 222748 223686 1 + 939 Putative iron transport system membrane protein - none -
fig|6666666.67444.peg.1889 CDS gi|387983189|gb|AJVH01000008.1| 223686 224669 3 + 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67444.peg.1890 CDS gi|387983189|gb|AJVH01000008.1| 224673 225485 3 + 813 Heme transporter analogous to IsdDEF, ATP-binding protein Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.1891 CDS gi|387983189|gb|AJVH01000008.1| 225507 228830 3 + 3324 FIG00545214: hypothetical protein - none -
fig|6666666.67444.peg.1892 CDS gi|387983189|gb|AJVH01000008.1| 228870 230099 3 + 1230 transporter, putative - none -
fig|6666666.67444.peg.1893 CDS gi|387983189|gb|AJVH01000008.1| 230111 230560 2 + 450 hypothetical membrane protein - none -
fig|6666666.67444.peg.1894 CDS gi|387983189|gb|AJVH01000008.1| 230671 230534 -1 - 138 hypothetical protein - none -
fig|6666666.67444.peg.1895 CDS gi|387983189|gb|AJVH01000008.1| 231595 230699 -1 - 897 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.1896 CDS gi|387983189|gb|AJVH01000008.1| 231689 232045 2 + 357 hypothetical protein - none -
fig|6666666.67444.peg.1897 CDS gi|387983189|gb|AJVH01000008.1| 232619 233188 2 + 570 Putative secreted protein - none -
fig|6666666.67444.peg.1898 CDS gi|387983189|gb|AJVH01000008.1| 233553 233413 -3 - 141 hypothetical protein - none -
fig|6666666.67444.peg.1899 CDS gi|387983189|gb|AJVH01000008.1| 233566 233709 1 + 144 Putative membrane protein - none -
fig|6666666.67444.peg.1900 CDS gi|387983189|gb|AJVH01000008.1| 233752 235368 1 + 1617 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.67444.peg.1901 CDS gi|387983189|gb|AJVH01000008.1| 236100 235444 -3 - 657 No significant database matches - none -
fig|6666666.67444.peg.1902 CDS gi|387983189|gb|AJVH01000008.1| 236221 236676 1 + 456 FIG00548619: hypothetical protein - none -
fig|6666666.67444.peg.1903 CDS gi|387983189|gb|AJVH01000008.1| 237828 236695 -3 - 1134 FIG00543896: hypothetical protein - none -
fig|6666666.67444.peg.1904 CDS gi|387983189|gb|AJVH01000008.1| 237909 239129 3 + 1221 FIG00545356: hypothetical protein - none -
fig|6666666.67444.peg.1905 CDS gi|387983189|gb|AJVH01000008.1| 239135 239830 2 + 696 two-component system response regulator - none -
fig|6666666.67444.peg.1906 CDS gi|387983189|gb|AJVH01000008.1| 240215 240565 2 + 351 Putative secreted protein - none -
fig|6666666.67444.peg.1907 CDS gi|387983189|gb|AJVH01000008.1| 240645 241007 3 + 363 Putative iron transport system exported solute-binding component - none -
fig|6666666.67444.peg.1908 CDS gi|387983189|gb|AJVH01000008.1| 240979 241122 1 + 144 Putative iron transport system exported solute-binding component - none -
fig|6666666.67444.peg.1909 CDS gi|387983189|gb|AJVH01000008.1| 241585 241136 -1 - 450 hypothetical membrane protein - none -
fig|6666666.67444.peg.1910 CDS gi|387983189|gb|AJVH01000008.1| 241701 242384 3 + 684 FIG00544716: hypothetical protein - none -
fig|6666666.67444.peg.1911 CDS gi|387983189|gb|AJVH01000008.1| 242546 243931 2 + 1386 DNA polymerase IV-like protein ImuB DNA repair, bacterial;
DNA replication strays
fig|6666666.67444.peg.1912 CDS gi|387983189|gb|AJVH01000008.1| 244621 243935 -1 - 687 No significant database matches - none -
fig|6666666.67444.peg.1913 CDS gi|387983189|gb|AJVH01000008.1| 244741 245619 1 + 879 FIG00546271: hypothetical protein - none -
fig|6666666.67444.peg.1914 CDS gi|387983189|gb|AJVH01000008.1| 247084 245636 -1 - 1449 Putative membrane protein - none -
fig|6666666.67444.peg.1915 CDS gi|387983189|gb|AJVH01000008.1| 247862 247185 -2 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67444.peg.1916 CDS gi|387983189|gb|AJVH01000008.1| 248881 247859 -1 - 1023 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67444.peg.1917 CDS gi|387983189|gb|AJVH01000008.1| 249791 248919 -2 - 873 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67444.peg.1918 CDS gi|387983189|gb|AJVH01000008.1| 250837 249965 -1 - 873 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67444.peg.1919 CDS gi|387983189|gb|AJVH01000008.1| 251016 250861 -3 - 156 hypothetical protein - none -
fig|6666666.67444.peg.1920 CDS gi|387983189|gb|AJVH01000008.1| 251155 251304 1 + 150 hypothetical protein - none -
fig|6666666.67444.peg.1921 CDS gi|387983189|gb|AJVH01000008.1| 251301 254174 3 + 2874 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) DNA replication strays
fig|6666666.67444.peg.1922 CDS gi|387983189|gb|AJVH01000008.1| 254215 254664 1 + 450 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.67444.peg.1923 CDS gi|387983189|gb|AJVH01000008.1| 254661 256001 3 + 1341 transmembrane protein, distant homology with ydbT - none -
fig|6666666.67444.peg.1924 CDS gi|387983189|gb|AJVH01000008.1| 256069 257034 1 + 966 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.67444.peg.1925 CDS gi|387983189|gb|AJVH01000008.1| 257103 257888 3 + 786 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67444.peg.1926 CDS gi|387983189|gb|AJVH01000008.1| 257878 258711 1 + 834 Putative ABC transport system membrane protein - none -
fig|6666666.67444.peg.1927 CDS gi|387983189|gb|AJVH01000008.1| 258708 259514 3 + 807 FIG00356309: hypothetical protein - none -
fig|6666666.67444.peg.1928 CDS gi|387983189|gb|AJVH01000008.1| 259580 260143 2 + 564 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67444.peg.1929 CDS gi|387983189|gb|AJVH01000008.1| 260392 261210 1 + 819 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67444.peg.1930 CDS gi|387983189|gb|AJVH01000008.1| 261203 261529 2 + 327 FIG00546438: hypothetical protein - none -
fig|6666666.67444.peg.1931 CDS gi|387983189|gb|AJVH01000008.1| 262218 261664 -3 - 555 Putative membrane protein - none -
fig|6666666.67444.peg.1932 CDS gi|387983189|gb|AJVH01000008.1| 262777 262292 -1 - 486 Putative membrane protein - none -
fig|6666666.67444.peg.1933 CDS gi|387983189|gb|AJVH01000008.1| 264090 262987 -3 - 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67444.peg.1934 CDS gi|387983189|gb|AJVH01000008.1| 264611 264153 -2 - 459 hypothetical membrane protein - none -
fig|6666666.67444.peg.1935 CDS gi|387983189|gb|AJVH01000008.1| 264947 266692 2 + 1746 FIG01124361: hypothetical protein - none -
fig|6666666.67444.peg.1936 CDS gi|387983189|gb|AJVH01000008.1| 266703 267764 3 + 1062 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.1937 CDS gi|387983189|gb|AJVH01000008.1| 267748 268800 1 + 1053 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.1938 CDS gi|387983189|gb|AJVH01000008.1| 268797 269654 3 + 858 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67444.peg.1939 CDS gi|387983189|gb|AJVH01000008.1| 269668 269784 1 + 117 hypothetical protein - none -
fig|6666666.67444.peg.1940 CDS gi|387983189|gb|AJVH01000008.1| 269844 270821 3 + 978 FIG00545097: hypothetical protein - none -
fig|6666666.67444.peg.1941 CDS gi|387983189|gb|AJVH01000008.1| 272248 270932 -1 - 1317 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67444.peg.1942 CDS gi|387983189|gb|AJVH01000008.1| 274714 272501 -1 - 2214 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.67444.peg.1943 CDS gi|387983189|gb|AJVH01000008.1| 274954 276183 1 + 1230 putative transport protein - none -
fig|6666666.67444.peg.1944 CDS gi|387983189|gb|AJVH01000008.1| 276194 277099 2 + 906 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67444.peg.1945 CDS gi|387983189|gb|AJVH01000008.1| 277245 277424 3 + 180 Putative membrane protein - none -
fig|6666666.67444.peg.1946 CDS gi|387983189|gb|AJVH01000008.1| 277614 278648 3 + 1035 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67444.peg.1947 CDS gi|387983189|gb|AJVH01000008.1| 278777 279937 2 + 1161 putative membrane protein - none -
fig|6666666.67444.peg.1948 CDS gi|387983189|gb|AJVH01000008.1| 281310 280042 -3 - 1269 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.1949 CDS gi|387983189|gb|AJVH01000008.1| 281309 282253 2 + 945 hypothetical protein - none -
fig|6666666.67444.peg.1950 CDS gi|387983189|gb|AJVH01000008.1| 283752 282520 -3 - 1233 FIG026501: hypothetical protein - none -
fig|6666666.67444.peg.1951 CDS gi|387983189|gb|AJVH01000008.1| 284612 283773 -2 - 840 FIG00544549: hypothetical protein - none -
fig|6666666.67444.peg.1952 CDS gi|387983189|gb|AJVH01000008.1| 284890 284609 -1 - 282 No significant database matches - none -
fig|6666666.67444.peg.1953 CDS gi|387983189|gb|AJVH01000008.1| 284910 285590 3 + 681 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.67444.peg.1954 CDS gi|387983189|gb|AJVH01000008.1| 285786 286337 3 + 552 Putative DNA-binding protein - none -
fig|6666666.67444.peg.1955 CDS gi|387983189|gb|AJVH01000008.1| 286435 287625 1 + 1191 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67444.peg.1956 CDS gi|387983189|gb|AJVH01000008.1| 287734 289140 1 + 1407 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.67444.peg.1957 CDS gi|387983189|gb|AJVH01000008.1| 289675 289493 -1 - 183 hypothetical protein - none -
fig|6666666.67444.peg.1958 CDS gi|387983189|gb|AJVH01000008.1| 289660 293085 1 + 3426 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67444.peg.1959 CDS gi|387983189|gb|AJVH01000008.1| 293939 293175 -2 - 765 conserved hypothetical protein - none -
fig|6666666.67444.peg.1960 CDS gi|387983189|gb|AJVH01000008.1| 294328 293954 -1 - 375 No significant database matches - none -
fig|6666666.67444.peg.1961 CDS gi|387983189|gb|AJVH01000008.1| 296315 294531 -2 - 1785 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67444.peg.1962 CDS gi|387983189|gb|AJVH01000008.1| 297453 296572 -3 - 882 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67444.peg.1963 CDS gi|387983189|gb|AJVH01000008.1| 297571 297684 1 + 114 hypothetical protein - none -
fig|6666666.67444.peg.1964 CDS gi|387983189|gb|AJVH01000008.1| 298050 299108 3 + 1059 FIG00548218: hypothetical protein - none -
fig|6666666.67444.peg.1965 CDS gi|387983189|gb|AJVH01000008.1| 299301 301418 3 + 2118 Putative membrane protein - none -
fig|6666666.67444.peg.1966 CDS gi|387983189|gb|AJVH01000008.1| 301843 301415 -1 - 429 FIG00547406: hypothetical protein - none -
fig|6666666.67444.peg.1967 CDS gi|387983189|gb|AJVH01000008.1| 302441 301845 -2 - 597 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67444.peg.1968 CDS gi|387983189|gb|AJVH01000008.1| 303365 302460 -2 - 906 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67444.peg.1969 CDS gi|387983189|gb|AJVH01000008.1| 304565 303510 -2 - 1056 transcriptional regulator - none -
fig|6666666.67444.peg.1970 CDS gi|387983189|gb|AJVH01000008.1| 305217 304957 -3 - 261 FIG00544173: hypothetical protein - none -
fig|6666666.67444.peg.1971 CDS gi|387983189|gb|AJVH01000008.1| 306944 305313 -2 - 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67444.peg.1972 CDS gi|387983189|gb|AJVH01000008.1| 307573 308667 1 + 1095 Putative membrane protein - none -
fig|6666666.67444.peg.1973 CDS gi|387983189|gb|AJVH01000008.1| 309610 308813 -1 - 798 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67444.peg.1974 CDS gi|387983189|gb|AJVH01000008.1| 309761 310561 2 + 801 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67444.peg.1975 CDS gi|387983189|gb|AJVH01000008.1| 310562 311026 2 + 465 FIG00545249: hypothetical protein - none -
fig|6666666.67444.peg.1976 CDS gi|387983189|gb|AJVH01000008.1| 311089 312285 1 + 1197 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67444.peg.1977 CDS gi|387983189|gb|AJVH01000008.1| 312285 312785 3 + 501 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67444.peg.1978 CDS gi|387983189|gb|AJVH01000008.1| 312879 312760 -3 - 120 hypothetical protein - none -
fig|6666666.67444.peg.1979 CDS gi|387983189|gb|AJVH01000008.1| 312946 313251 1 + 306 FIG00546022: hypothetical protein - none -
fig|6666666.67444.peg.1980 CDS gi|387983189|gb|AJVH01000008.1| 314358 313243 -3 - 1116 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1981 CDS gi|387983189|gb|AJVH01000008.1| 314534 314358 -2 - 177 [NiFe] hydrogenase metallocenter assembly protein HypC G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1982 CDS gi|387983189|gb|AJVH01000008.1| 314673 315743 3 + 1071 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1983 CDS gi|387983189|gb|AJVH01000008.1| 317986 315752 -1 - 2235 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1984 CDS gi|387983189|gb|AJVH01000008.1| 318005 318337 2 + 333 [NiFe] hydrogenase nickel incorporation protein HypA G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1985 CDS gi|387983189|gb|AJVH01000008.1| 318350 319135 2 + 786 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1986 CDS gi|387983189|gb|AJVH01000008.1| 319436 320692 2 + 1257 Uptake hydrogenase small subunit precursor (EC 1.12.99.6) Hydrogenases
fig|6666666.67444.peg.1987 CDS gi|387983189|gb|AJVH01000008.1| 320698 322443 1 + 1746 Uptake hydrogenase large subunit (EC 1.12.99.6) Hydrogenases
fig|6666666.67444.peg.1988 CDS gi|387983189|gb|AJVH01000008.1| 322440 323594 3 + 1155 Ni,Fe-hydrogenase I cytochrome b subunit Hydrogenases
fig|6666666.67444.peg.1989 CDS gi|387983189|gb|AJVH01000008.1| 323638 324117 1 + 480 Hydrogenase maturation protease (EC 3.4.24.-) - none -
fig|6666666.67444.peg.1990 CDS gi|387983189|gb|AJVH01000008.1| 324479 324114 -2 - 366 [NiFe] hydrogenase nickel incorporation protein HypA G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1991 CDS gi|387983189|gb|AJVH01000008.1| 324506 325549 2 + 1044 Putative reducing hydrogenase alpha subunit - none -
fig|6666666.67444.peg.1992 CDS gi|387983189|gb|AJVH01000008.1| 325555 325812 1 + 258 [NiFe] hydrogenase metallocenter assembly protein HypC G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67444.peg.1993 CDS gi|387983189|gb|AJVH01000008.1| 326471 325809 -2 - 663 FIG00545912: hypothetical protein - none -
fig|6666666.67444.peg.1994 CDS gi|387983189|gb|AJVH01000008.1| 328051 326483 -1 - 1569 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67444.peg.1995 CDS gi|387983189|gb|AJVH01000008.1| 328160 329110 2 + 951 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67444.peg.1996 CDS gi|387983189|gb|AJVH01000008.1| 329264 330352 2 + 1089 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67444.peg.1997 CDS gi|387983189|gb|AJVH01000008.1| 330811 331110 1 + 300 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67444.peg.1998 CDS gi|387983189|gb|AJVH01000008.1| 331639 331184 -1 - 456 FIG00544777: hypothetical protein - none -
fig|6666666.67444.peg.1999 CDS gi|387983189|gb|AJVH01000008.1| 331888 332151 1 + 264 FIG00543823: hypothetical protein - none -
fig|6666666.67444.peg.2000 CDS gi|387983189|gb|AJVH01000008.1| 332249 333625 2 + 1377 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67444.peg.2001 CDS gi|387983189|gb|AJVH01000008.1| 333674 334681 2 + 1008 FIG00545059: hypothetical protein - none -
fig|6666666.67444.peg.2002 CDS gi|387983189|gb|AJVH01000008.1| 334856 335890 2 + 1035 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67444.peg.2003 CDS gi|387983189|gb|AJVH01000008.1| 336749 335916 -2 - 834 FIG00544185: hypothetical protein - none -
fig|6666666.67444.peg.2004 CDS gi|387983189|gb|AJVH01000008.1| 337090 337443 1 + 354 FIG00544092: hypothetical protein - none -
fig|6666666.67444.peg.2005 CDS gi|387983189|gb|AJVH01000008.1| 337549 338985 1 + 1437 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67444.peg.2006 CDS gi|387983189|gb|AJVH01000008.1| 338985 339602 3 + 618 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.67444.peg.2007 CDS gi|387983189|gb|AJVH01000008.1| 339680 340357 2 + 678 DNA-binding response regulator mtrA - none -
fig|6666666.67444.peg.2008 CDS gi|387983189|gb|AJVH01000008.1| 340421 341932 2 + 1512 Putative two component system sensor kinase - none -
fig|6666666.67444.peg.2009 CDS gi|387983189|gb|AJVH01000008.1| 341925 343670 3 + 1746 LpqB - none -
fig|6666666.67444.peg.2010 CDS gi|387983189|gb|AJVH01000008.1| 343717 343875 1 + 159 hypothetical protein - none -
fig|6666666.67444.peg.2011 CDS gi|387983189|gb|AJVH01000008.1| 343830 344294 3 + 465 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.67444.peg.2012 CDS gi|387983189|gb|AJVH01000008.1| 344430 345092 3 + 663 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67444.peg.2013 CDS gi|387983189|gb|AJVH01000008.1| 345270 347831 3 + 2562 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67444.peg.2014 CDS gi|387983189|gb|AJVH01000008.1| 348335 347892 -2 - 444 FIG00544280: hypothetical protein - none -
fig|6666666.67444.peg.2015 CDS gi|387983189|gb|AJVH01000008.1| 348495 348905 3 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.67444.peg.2016 CDS gi|387983189|gb|AJVH01000008.1| 348917 349423 2 + 507 FIG00544397: hypothetical protein - none -
fig|6666666.67444.peg.2017 CDS gi|387983189|gb|AJVH01000008.1| 349645 350715 1 + 1071 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.67444.peg.2018 CDS gi|387983189|gb|AJVH01000008.1| 350730 352010 3 + 1281 POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) - none -
fig|6666666.67444.peg.2019 CDS gi|387983189|gb|AJVH01000008.1| 352902 352012 -3 - 891 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.67444.peg.2020 CDS gi|387983189|gb|AJVH01000008.1| 354319 353024 -1 - 1296 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67444.peg.2021 CDS gi|387983189|gb|AJVH01000008.1| 354313 354999 1 + 687 FIG00543821: hypothetical protein - none -
fig|6666666.67444.peg.2022 CDS gi|387983189|gb|AJVH01000008.1| 355488 354985 -3 - 504 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.67444.peg.2023 CDS gi|387983189|gb|AJVH01000008.1| 355534 356157 1 + 624 RNA polymerase sigma-E factor - none -
fig|6666666.67444.peg.2024 CDS gi|387983189|gb|AJVH01000008.1| 356154 356405 3 + 252 FIG00544827: hypothetical protein - none -
fig|6666666.67444.peg.2025 CDS gi|387983189|gb|AJVH01000008.1| 356754 356410 -3 - 345 No significant database matches - none -
fig|6666666.67444.peg.2026 CDS gi|387983189|gb|AJVH01000008.1| 357352 357092 -1 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67444.peg.2027 CDS gi|387983189|gb|AJVH01000008.1| 357985 358446 1 + 462 FIG00543921: hypothetical protein - none -
fig|6666666.67444.peg.2028 CDS gi|387983189|gb|AJVH01000008.1| 359702 358440 -2 - 1263 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67444.peg.2029 CDS gi|387983189|gb|AJVH01000008.1| 361009 359699 -1 - 1311 putative ATP-dependent RNA helicase - none -
fig|6666666.67444.peg.2030 CDS gi|387983189|gb|AJVH01000008.1| 361226 361453 2 + 228 FIG00543928: hypothetical protein - none -
fig|6666666.67444.peg.2031 CDS gi|387983189|gb|AJVH01000008.1| 361456 362334 1 + 879 FIG00544386: hypothetical protein - none -
fig|6666666.67444.peg.2032 CDS gi|387983189|gb|AJVH01000008.1| 362357 363214 2 + 858 FIG00544868: hypothetical protein - none -
fig|6666666.67444.peg.2033 CDS gi|387983189|gb|AJVH01000008.1| 363218 366400 2 + 3183 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67444.peg.2034 CDS gi|387983189|gb|AJVH01000008.1| 366394 369624 1 + 3231 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67444.peg.2035 CDS gi|387983189|gb|AJVH01000008.1| 369669 370757 3 + 1089 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67444.peg.2036 CDS gi|387983189|gb|AJVH01000008.1| 370789 371472 1 + 684 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67444.peg.2037 CDS gi|387983189|gb|AJVH01000008.1| 371465 373516 2 + 2052 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67444.peg.2038 CDS gi|387983189|gb|AJVH01000008.1| 374456 374911 2 + 456 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67444.peg.2039 CDS gi|387983189|gb|AJVH01000008.1| 376299 374908 -3 - 1392 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67444.peg.2040 CDS gi|387983189|gb|AJVH01000008.1| 376380 377432 3 + 1053 Lon-like protease with PDZ domain CBSS-269801.1.peg.1715
fig|6666666.67444.peg.2041 CDS gi|387983189|gb|AJVH01000008.1| 378142 377444 -1 - 699 FIG00544133: hypothetical protein - none -
fig|6666666.67444.peg.2042 CDS gi|387983189|gb|AJVH01000008.1| 378696 378193 -3 - 504 FIG129854: hypothetical protein - none -
fig|6666666.67444.peg.2043 CDS gi|387983189|gb|AJVH01000008.1| 378869 381832 2 + 2964 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67444.peg.2044 CDS gi|387983189|gb|AJVH01000008.1| 382396 383895 1 + 1500 FIG00548804: hypothetical protein - none -
fig|6666666.67444.peg.2045 CDS gi|387983189|gb|AJVH01000008.1| 383919 384782 3 + 864 hypothetical protein - none -
fig|6666666.67444.peg.2046 CDS gi|387983189|gb|AJVH01000008.1| 384779 385975 2 + 1197 FIG00547607: hypothetical protein - none -
fig|6666666.67444.peg.2047 CDS gi|387983189|gb|AJVH01000008.1| 386053 386166 1 + 114 hypothetical protein - none -
fig|6666666.67444.peg.2048 CDS gi|387983189|gb|AJVH01000008.1| 386412 386260 -3 - 153 hypothetical protein - none -
fig|6666666.67444.peg.2049 CDS gi|387983189|gb|AJVH01000008.1| 387221 386625 -2 - 597 probable replicative DNA helicase - none -
fig|6666666.67444.peg.2050 CDS gi|387983560|gb|AJVH01000007.1| 580 167 -1 - 414 hypothetical protein - none -
fig|6666666.67444.peg.2051 CDS gi|387983560|gb|AJVH01000007.1| 898 761 -1 - 138 hypothetical protein - none -
fig|6666666.67444.peg.2052 CDS gi|387983560|gb|AJVH01000007.1| 1987 2274 1 + 288 Mobile element protein - none -
fig|6666666.67444.peg.2053 CDS gi|387983560|gb|AJVH01000007.1| 2277 2492 3 + 216 hypothetical protein - none -
fig|6666666.67444.peg.2054 CDS gi|387983560|gb|AJVH01000007.1| 2541 2699 3 + 159 No significant database matches - none -
fig|6666666.67444.peg.2055 CDS gi|387983560|gb|AJVH01000007.1| 3824 2724 -2 - 1101 MloA - none -
fig|6666666.67444.peg.2056 CDS gi|387983560|gb|AJVH01000007.1| 3823 4521 1 + 699 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67444.peg.2057 CDS gi|387983560|gb|AJVH01000007.1| 5385 4570 -3 - 816 Putative secreted protease - none -
fig|6666666.67444.peg.2058 CDS gi|387983560|gb|AJVH01000007.1| 5419 5550 1 + 132 hypothetical protein - none -
fig|6666666.67444.peg.2059 CDS gi|387983572|gb|AJVH01000006.1| 36 179 3 + 144 hypothetical protein - none -
fig|6666666.67444.peg.2060 CDS gi|387983572|gb|AJVH01000006.1| 500 721 2 + 222 hypothetical protein - none -
fig|6666666.67444.peg.2061 CDS gi|387983572|gb|AJVH01000006.1| 762 881 3 + 120 hypothetical protein - none -
fig|6666666.67444.peg.2062 CDS gi|387983572|gb|AJVH01000006.1| 1341 1204 -3 - 138 hypothetical protein - none -
fig|6666666.67444.peg.2063 CDS gi|387983572|gb|AJVH01000006.1| 1533 2249 3 + 717 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.67444.peg.2064 CDS gi|387983572|gb|AJVH01000006.1| 2246 3610 2 + 1365 Similar to tetracycline resistance protein - none -
fig|6666666.67444.peg.2065 CDS gi|387983572|gb|AJVH01000006.1| 3645 4301 3 + 657 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67444.peg.2066 CDS gi|387983572|gb|AJVH01000006.1| 4309 5961 1 + 1653 Probable phosphomannomutase pmmB (EC 5.4.2.8) - none -
fig|6666666.67444.peg.2067 CDS gi|387983572|gb|AJVH01000006.1| 6008 7045 2 + 1038 integral membrane protein - none -
fig|6666666.67444.peg.2068 CDS gi|387983572|gb|AJVH01000006.1| 7883 7047 -2 - 837 FIG00544278: hypothetical protein - none -
fig|6666666.67444.peg.2069 CDS gi|387983572|gb|AJVH01000006.1| 8074 9339 1 + 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67444.peg.2070 CDS gi|387983572|gb|AJVH01000006.1| 9388 10419 1 + 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67444.peg.2071 CDS gi|387983572|gb|AJVH01000006.1| 11004 10426 -3 - 579 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.67444.peg.2072 CDS gi|387983572|gb|AJVH01000006.1| 11119 12657 1 + 1539 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67444.peg.2073 CDS gi|387983572|gb|AJVH01000006.1| 13705 12647 -1 - 1059 FIG00547503: hypothetical protein - none -
fig|6666666.67444.peg.2074 CDS gi|387983572|gb|AJVH01000006.1| 15249 13696 -3 - 1554 Putative transport system permease (iron) - none -
fig|6666666.67444.peg.2075 CDS gi|387983572|gb|AJVH01000006.1| 16247 15246 -2 - 1002 iron ABC transporter substrate-binding protein - none -
fig|6666666.67444.peg.2076 CDS gi|387983572|gb|AJVH01000006.1| 17698 16328 -1 - 1371 Glycerol-3-phosphate transporter Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67444.peg.2077 CDS gi|387983572|gb|AJVH01000006.1| 18528 17827 -3 - 702 two-component regulatory protein - none -
fig|6666666.67444.peg.2078 CDS gi|387983572|gb|AJVH01000006.1| 19294 18521 -1 - 774 two-component sensor protein - none -
fig|6666666.67444.peg.2079 CDS gi|387983572|gb|AJVH01000006.1| 19752 19450 -3 - 303 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67444.peg.2080 CDS gi|387983572|gb|AJVH01000006.1| 20018 19752 -2 - 267 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67444.peg.2081 CDS gi|387983572|gb|AJVH01000006.1| 20395 20018 -1 - 378 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67444.peg.2082 CDS gi|387983572|gb|AJVH01000006.1| 21921 20398 -3 - 1524 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67444.peg.2083 CDS gi|387983572|gb|AJVH01000006.1| 22346 21921 -2 - 426 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67444.peg.2084 CDS gi|387983572|gb|AJVH01000006.1| 25154 22350 -2 - 2805 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67444.peg.2085 CDS gi|387983572|gb|AJVH01000006.1| 25432 26829 1 + 1398 FIG00544507: hypothetical protein - none -
fig|6666666.67444.peg.2086 CDS gi|387983572|gb|AJVH01000006.1| 27796 26906 -1 - 891 No significant database matches - none -
fig|6666666.67444.peg.2087 CDS gi|387983572|gb|AJVH01000006.1| 29074 28169 -1 - 906 putative secreted protein - none -
fig|6666666.67444.peg.2088 CDS gi|387983572|gb|AJVH01000006.1| 29111 29575 2 + 465 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.67444.peg.2089 CDS gi|387983572|gb|AJVH01000006.1| 31964 29580 -2 - 2385 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67444.peg.2090 CDS gi|387983572|gb|AJVH01000006.1| 32163 32510 3 + 348 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67444.peg.2091 CDS gi|387983572|gb|AJVH01000006.1| 32575 32706 1 + 132 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67444.peg.2092 CDS gi|387983572|gb|AJVH01000006.1| 32708 33172 2 + 465 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67444.peg.2093 CDS gi|387983572|gb|AJVH01000006.1| 33221 34045 2 + 825 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67444.peg.2094 CDS gi|387983572|gb|AJVH01000006.1| 34789 34106 -1 - 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67444.peg.2095 CDS gi|387983572|gb|AJVH01000006.1| 35293 36048 1 + 756 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67444.peg.2096 CDS gi|387983572|gb|AJVH01000006.1| 36041 36601 2 + 561 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.67444.peg.2097 CDS gi|387983572|gb|AJVH01000006.1| 36598 37341 1 + 744 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67444.peg.2098 CDS gi|387983572|gb|AJVH01000006.1| 37364 38560 2 + 1197 putative serine protease - none -
fig|6666666.67444.peg.2099 CDS gi|387983572|gb|AJVH01000006.1| 39495 38557 -3 - 939 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.67444.peg.2100 CDS gi|387983572|gb|AJVH01000006.1| 40083 39583 -3 - 501 FIG00544230: hypothetical protein - none -
fig|6666666.67444.peg.2101 CDS gi|387983572|gb|AJVH01000006.1| 41659 40802 -1 - 858 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67444.peg.2102 CDS gi|387983572|gb|AJVH01000006.1| 42131 43168 2 + 1038 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.67444.peg.2103 CDS gi|387983572|gb|AJVH01000006.1| 43161 44258 3 + 1098 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.67444.peg.2104 CDS gi|387983572|gb|AJVH01000006.1| 44261 45001 2 + 741 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.67444.peg.2105 CDS gi|387983572|gb|AJVH01000006.1| 45001 45579 1 + 579 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.67444.peg.2106 CDS gi|387983572|gb|AJVH01000006.1| 45602 45799 2 + 198 FIG043778: hypothetical protein CBSS-336982.3.peg.3874
fig|6666666.67444.peg.2107 CDS gi|387983572|gb|AJVH01000006.1| 45796 46071 1 + 276 FIG00544831: hypothetical protein - none -
fig|6666666.67444.peg.2108 CDS gi|387983572|gb|AJVH01000006.1| 46068 46394 3 + 327 FIG00545374: hypothetical protein - none -
fig|6666666.67444.peg.2109 CDS gi|387983572|gb|AJVH01000006.1| 48720 46384 -3 - 2337 FIG00545284: hypothetical protein - none -
fig|6666666.67444.peg.2110 CDS gi|387983572|gb|AJVH01000006.1| 48991 49194 1 + 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67444.peg.2111 CDS gi|387983572|gb|AJVH01000006.1| 49368 49985 3 + 618 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67444.peg.2112 CDS gi|387983572|gb|AJVH01000006.1| 49982 50689 2 + 708 FIG00547760: hypothetical protein - none -
fig|6666666.67444.peg.2113 CDS gi|387983572|gb|AJVH01000006.1| 50686 51933 1 + 1248 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67444.peg.2114 CDS gi|387983572|gb|AJVH01000006.1| 51930 53417 3 + 1488 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67444.peg.2115 CDS gi|387983572|gb|AJVH01000006.1| 53418 55178 3 + 1761 Putative transport system membrane protein - none -
fig|6666666.67444.peg.2116 CDS gi|387983572|gb|AJVH01000006.1| 56682 55156 -3 - 1527 Putative nucleoside-diphosphate-sugar epimerase - none -
fig|6666666.67444.peg.2117 CDS gi|387983572|gb|AJVH01000006.1| 56790 59684 3 + 2895 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67444.peg.2118 CDS gi|387983572|gb|AJVH01000006.1| 60513 60671 3 + 159 hypothetical protein - none -
fig|6666666.67444.peg.2119 CDS gi|387983572|gb|AJVH01000006.1| 62680 60746 -1 - 1935 oligopeptide transporter - none -
fig|6666666.67444.peg.2120 CDS gi|387983572|gb|AJVH01000006.1| 64845 62809 -3 - 2037 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.67444.peg.2121 CDS gi|387983572|gb|AJVH01000006.1| 64952 65851 2 + 900 hypothetical protein - none -
fig|6666666.67444.peg.2122 CDS gi|387983572|gb|AJVH01000006.1| 67394 65868 -2 - 1527 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67444.peg.2123 CDS gi|387983572|gb|AJVH01000006.1| 67483 68658 1 + 1176 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67444.peg.2124 CDS gi|387983572|gb|AJVH01000006.1| 70400 69966 -2 - 435 Putative phage integrase - none -
fig|6666666.67444.peg.2125 CDS gi|387983572|gb|AJVH01000006.1| 70731 70354 -3 - 378 Putative phage integrase - none -
fig|6666666.67444.peg.2126 CDS gi|387983572|gb|AJVH01000006.1| 70748 70864 2 + 117 hypothetical protein - none -
fig|6666666.67444.peg.2127 CDS gi|387983572|gb|AJVH01000006.1| 71088 70957 -3 - 132 No significant database matches - none -
fig|6666666.67444.peg.2128 CDS gi|387983572|gb|AJVH01000006.1| 71886 71350 -3 - 537 RhuM - none -
fig|6666666.67444.peg.2129 CDS gi|387983572|gb|AJVH01000006.1| 72728 72931 2 + 204 Putative exported protein - none -
fig|6666666.67444.peg.2130 CDS gi|387983648|gb|AJVH01000005.1| 607 1830 1 + 1224 polysaccharide deacetylase family protein - none -
fig|6666666.67444.peg.2131 CDS gi|387983648|gb|AJVH01000005.1| 3191 1827 -2 - 1365 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67444.peg.2132 CDS gi|387983648|gb|AJVH01000005.1| 3273 4175 3 + 903 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) CBSS-1806.1.peg.1285;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67444.peg.2133 CDS gi|387983648|gb|AJVH01000005.1| 4169 4726 2 + 558 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) CBSS-1806.1.peg.1285;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67444.peg.2134 CDS gi|387983648|gb|AJVH01000005.1| 4890 4723 -3 - 168 Putative membrane protein - none -
fig|6666666.67444.peg.2135 CDS gi|387983648|gb|AJVH01000005.1| 5911 5303 -1 - 609 Mobile element protein - none -
fig|6666666.67444.peg.2136 CDS gi|387983648|gb|AJVH01000005.1| 7708 6719 -1 - 990 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67444.peg.2137 CDS gi|387983648|gb|AJVH01000005.1| 8240 9880 2 + 1641 Cell wall surface anchor family protein Sortase
fig|6666666.67444.peg.2138 CDS gi|387983648|gb|AJVH01000005.1| 9992 9870 -2 - 123 hypothetical protein - none -
fig|6666666.67444.peg.2139 CDS gi|387983648|gb|AJVH01000005.1| 9980 10918 2 + 939 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67444.peg.2140 CDS gi|387983648|gb|AJVH01000005.1| 10953 11702 3 + 750 Putative surface anchored protein - none -
fig|6666666.67444.peg.2141 CDS gi|387983648|gb|AJVH01000005.1| 11708 14827 2 + 3120 FIG00547033: hypothetical protein - none -
fig|6666666.67444.peg.2142 CDS gi|387983648|gb|AJVH01000005.1| 15495 15118 -3 - 378 No significant database matches - none -
fig|6666666.67444.peg.2143 CDS gi|387983648|gb|AJVH01000005.1| 15913 15449 -1 - 465 No significant database matches - none -
fig|6666666.67444.peg.2144 CDS gi|387983648|gb|AJVH01000005.1| 16798 16580 -1 - 219 No significant database matches - none -
fig|6666666.67444.peg.2145 CDS gi|387983648|gb|AJVH01000005.1| 17476 16919 -1 - 558 Putative exported protein - none -
fig|6666666.67444.peg.2146 CDS gi|387983648|gb|AJVH01000005.1| 18627 17617 -3 - 1011 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67444.peg.2147 CDS gi|387983648|gb|AJVH01000005.1| 18665 19117 2 + 453 FIG00544249: hypothetical protein - none -
fig|6666666.67444.peg.2148 CDS gi|387983648|gb|AJVH01000005.1| 19114 19599 1 + 486 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67444.peg.2149 CDS gi|387983648|gb|AJVH01000005.1| 20216 20512 2 + 297 Putative excisionase - none -
fig|6666666.67444.peg.2150 CDS gi|387983648|gb|AJVH01000005.1| 20973 23309 3 + 2337 putative membrane protein - none -
fig|6666666.67444.peg.2151 CDS gi|387983648|gb|AJVH01000005.1| 23327 23452 2 + 126 hypothetical protein - none -
fig|6666666.67444.peg.2152 CDS gi|387983648|gb|AJVH01000005.1| 23632 24924 1 + 1293 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.2153 CDS gi|387983648|gb|AJVH01000005.1| 24934 25827 1 + 894 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67444.peg.2154 CDS gi|387983648|gb|AJVH01000005.1| 25907 27295 2 + 1389 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.67444.peg.2155 CDS gi|387983648|gb|AJVH01000005.1| 27795 27292 -3 - 504 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67444.peg.2156 CDS gi|387983648|gb|AJVH01000005.1| 28763 27792 -2 - 972 L-idonate 5-dehydrogenase (EC 1.1.1.264) D-gluconate and ketogluconates metabolism
fig|6666666.67444.peg.2157 CDS gi|387983648|gb|AJVH01000005.1| 29515 28766 -1 - 750 5-keto-D-gluconate 5-reductase (EC 1.1.1.69) D-gluconate and ketogluconates metabolism
fig|6666666.67444.peg.2158 CDS gi|387983648|gb|AJVH01000005.1| 29542 29775 1 + 234 hypothetical protein - none -
fig|6666666.67444.peg.2159 CDS gi|387983648|gb|AJVH01000005.1| 29897 30043 2 + 147 Doubtful CDS. No strong consensus RBS usptream. No significant database matches - none -
fig|6666666.67444.peg.2160 CDS gi|387983648|gb|AJVH01000005.1| 30234 31493 3 + 1260 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67444.peg.2161 CDS gi|387983648|gb|AJVH01000005.1| 31497 32048 3 + 552 FIG00544659: hypothetical protein - none -
fig|6666666.67444.peg.2162 CDS gi|387983648|gb|AJVH01000005.1| 32059 34149 1 + 2091 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67444.peg.2163 CDS gi|387983648|gb|AJVH01000005.1| 34223 34543 2 + 321 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67444.peg.2164 CDS gi|387983648|gb|AJVH01000005.1| 34547 35203 2 + 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67444.peg.2165 CDS gi|387983648|gb|AJVH01000005.1| 35961 35209 -3 - 753 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67444.peg.2166 CDS gi|387983648|gb|AJVH01000005.1| 37225 35963 -1 - 1263 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67444.peg.2167 CDS gi|387983648|gb|AJVH01000005.1| 38322 37246 -3 - 1077 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.67444.peg.2168 CDS gi|387983648|gb|AJVH01000005.1| 39123 38371 -3 - 753 Putative nitroreductase - none -
fig|6666666.67444.peg.2169 CDS gi|387983648|gb|AJVH01000005.1| 41000 39183 -2 - 1818 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67444.peg.2170 CDS gi|387983648|gb|AJVH01000005.1| 41182 42180 1 + 999 Deoxyribonucleoside regulator DeoR (transcriptional repressor) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67444.peg.2171 CDS gi|387983694|gb|AJVH01000004.1| 216 1223 3 + 1008 hypothetical protein - none -
fig|6666666.67444.peg.2172 CDS gi|387983694|gb|AJVH01000004.1| 2678 1452 -2 - 1227 Putative phage integrase - none -
fig|6666666.67444.peg.2173 CDS gi|387983694|gb|AJVH01000004.1| 3800 2778 -2 - 1023 Transcriptional regulator - none -
fig|6666666.67444.peg.2174 CDS gi|387983694|gb|AJVH01000004.1| 4375 3812 -1 - 564 No significant database matches - none -
fig|6666666.67444.peg.2175 CDS gi|387983694|gb|AJVH01000004.1| 4877 4470 -2 - 408 No significant database matches - none -
fig|6666666.67444.peg.2176 CDS gi|387983694|gb|AJVH01000004.1| 5378 4887 -2 - 492 No significant database matches - none -
fig|6666666.67444.peg.2177 CDS gi|387983694|gb|AJVH01000004.1| 5498 5734 2 + 237 Putative transcriptional regulator - none -
fig|6666666.67444.peg.2178 CDS gi|387983694|gb|AJVH01000004.1| 5781 6248 3 + 468 hypothetical protein - none -
fig|6666666.67444.peg.2179 CDS gi|387983694|gb|AJVH01000004.1| 6852 6472 -3 - 381 hypothetical protein - none -
fig|6666666.67444.peg.2180 CDS gi|387983694|gb|AJVH01000004.1| 7306 7040 -1 - 267 hypothetical protein - none -
fig|6666666.67444.peg.2181 CDS gi|387983694|gb|AJVH01000004.1| 7400 8218 2 + 819 Phage antirepressor protein - none -
fig|6666666.67444.peg.2182 CDS gi|387983694|gb|AJVH01000004.1| 8238 8438 3 + 201 hypothetical protein - none -
fig|6666666.67444.peg.2183 CDS gi|387983694|gb|AJVH01000004.1| 8435 8677 2 + 243 No significant database matches - none -
fig|6666666.67444.peg.2184 CDS gi|387983694|gb|AJVH01000004.1| 8689 8913 1 + 225 Putative exported protein - none -
fig|6666666.67444.peg.2185 CDS gi|387983694|gb|AJVH01000004.1| 8910 9056 3 + 147 No significant database matches - none -
fig|6666666.67444.peg.2186 CDS gi|387983694|gb|AJVH01000004.1| 9472 10173 1 + 702 No significant database matches - none -
fig|6666666.67444.peg.2187 CDS gi|387983694|gb|AJVH01000004.1| 10457 10275 -2 - 183 hypothetical protein - none -
fig|6666666.67444.peg.2188 CDS gi|387983694|gb|AJVH01000004.1| 10609 11817 1 + 1209 No significant database matches - none -
fig|6666666.67444.peg.2189 CDS gi|387983694|gb|AJVH01000004.1| 12095 12397 2 + 303 No significant database matches - none -
fig|6666666.67444.peg.2190 CDS gi|387983694|gb|AJVH01000004.1| 12518 12799 2 + 282 Putative phage protein - none -
fig|6666666.67444.peg.2191 CDS gi|387983694|gb|AJVH01000004.1| 12952 13296 1 + 345 hypothetical protein - none -
fig|6666666.67444.peg.2192 CDS gi|387983694|gb|AJVH01000004.1| 13286 14887 2 + 1602 hypothetical protein - none -
fig|6666666.67444.peg.2193 CDS gi|387983694|gb|AJVH01000004.1| 14900 16150 2 + 1251 Phage portal (connector) protein - none -
fig|6666666.67444.peg.2194 CDS gi|387983694|gb|AJVH01000004.1| 16147 17190 1 + 1044 Phage capsid and scaffold Phage capsid proteins
fig|6666666.67444.peg.2195 CDS gi|387983694|gb|AJVH01000004.1| 17187 18437 3 + 1251 Phage major capsid protein Phage capsid proteins
fig|6666666.67444.peg.2196 CDS gi|387983694|gb|AJVH01000004.1| 18437 18637 2 + 201 No significant database matches - none -
fig|6666666.67444.peg.2197 CDS gi|387983694|gb|AJVH01000004.1| 18938 19141 2 + 204 Putative phage protein - none -
fig|6666666.67444.peg.2198 CDS gi|387983694|gb|AJVH01000004.1| 19138 19500 1 + 363 Phage protein - none -
fig|6666666.67444.peg.2199 CDS gi|387983694|gb|AJVH01000004.1| 19493 19759 2 + 267 Putative phage protein - none -
fig|6666666.67444.peg.2200 CDS gi|387983694|gb|AJVH01000004.1| 19752 20126 3 + 375 Putative phage protein - none -
fig|6666666.67444.peg.2201 CDS gi|387983694|gb|AJVH01000004.1| 20257 21102 1 + 846 Putative phage protein - none -
fig|6666666.67444.peg.2202 CDS gi|387983694|gb|AJVH01000004.1| 21199 21576 1 + 378 Putative phage protein - none -
fig|6666666.67444.peg.2203 CDS gi|387983694|gb|AJVH01000004.1| 21645 21947 3 + 303 No significant database matches - none -
fig|6666666.67444.peg.2204 CDS gi|387983694|gb|AJVH01000004.1| 21957 27599 3 + 5643 FIG00549867: hypothetical protein - none -
fig|6666666.67444.peg.2205 CDS gi|387983694|gb|AJVH01000004.1| 27609 28361 3 + 753 immunity-specific protein Beta201 - none -
fig|6666666.67444.peg.2206 CDS gi|387983694|gb|AJVH01000004.1| 28362 29222 3 + 861 immunity-specific protein Beta286 - none -
fig|6666666.67444.peg.2207 CDS gi|387983694|gb|AJVH01000004.1| 29222 30337 2 + 1116 immunity-specific protein Beta371 - none -
fig|6666666.67444.peg.2208 CDS gi|387983694|gb|AJVH01000004.1| 30397 31521 1 + 1125 Putative phage tail fiber protein - none -
fig|6666666.67444.peg.2209 CDS gi|387983694|gb|AJVH01000004.1| 32311 33012 1 + 702 hypothetical protein - none -
fig|6666666.67444.peg.2210 CDS gi|387983694|gb|AJVH01000004.1| 33009 33320 3 + 312 Putative membrane protein - none -
fig|6666666.67444.peg.2211 CDS gi|387983694|gb|AJVH01000004.1| 33331 33795 1 + 465 Putative membrane protein - none -
fig|6666666.67444.peg.2212 CDS gi|387983694|gb|AJVH01000004.1| 33792 34130 3 + 339 Putative secreted protein - none -
fig|6666666.67444.peg.2213 CDS gi|387983694|gb|AJVH01000004.1| 34480 36162 1 + 1683 hypothetical protein - none -
fig|6666666.67444.peg.2214 CDS gi|387983745|gb|AJVH01000003.1| 1470 28 -3 - 1443 Mercuric ion reductase (EC 1.16.1.1) Mercuric reductase;
Mercury resistance operon
fig|6666666.67444.peg.2215 CDS gi|387983745|gb|AJVH01000003.1| 1521 2441 3 + 921 hypothetical protein - none -
fig|6666666.67444.peg.2216 CDS gi|387983745|gb|AJVH01000003.1| 3344 2490 -2 - 855 hypothetical protein - none -
fig|6666666.67444.peg.2217 CDS gi|387983745|gb|AJVH01000003.1| 4880 4641 -2 - 240 hypothetical protein - none -
fig|6666666.67444.peg.2218 CDS gi|387983745|gb|AJVH01000003.1| 5390 5061 -2 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.67444.peg.2219 CDS gi|387983745|gb|AJVH01000003.1| 5746 5387 -1 - 360 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.67444.peg.2220 CDS gi|387983745|gb|AJVH01000003.1| 6288 5743 -3 - 546 Transcriptional regulator, TetR family - none -
fig|6666666.67444.peg.2221 CDS gi|387983745|gb|AJVH01000003.1| 8010 7015 -3 - 996 monooxygenase, putative - none -
fig|6666666.67444.peg.2222 CDS gi|387983745|gb|AJVH01000003.1| 8472 9596 3 + 1125 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67444.peg.2223 CDS gi|387983745|gb|AJVH01000003.1| 9593 10012 2 + 420 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67444.peg.2224 CDS gi|387983745|gb|AJVH01000003.1| 11180 10296 -2 - 885 Transporter - none -
fig|6666666.67444.peg.2225 CDS gi|387983745|gb|AJVH01000003.1| 11490 11170 -3 - 321 ArsR-family transcriptional regulator - none -
fig|6666666.67444.peg.2226 CDS gi|387983745|gb|AJVH01000003.1| 11730 12449 3 + 720 No significant database matches - none -
fig|6666666.67444.peg.2227 CDS gi|387983745|gb|AJVH01000003.1| 12449 14242 2 + 1794 No significant database matches - none -
fig|6666666.67444.peg.2228 CDS gi|387983745|gb|AJVH01000003.1| 15041 15454 2 + 414 Putative secreted protein - none -
fig|6666666.67444.peg.2229 CDS gi|387983745|gb|AJVH01000003.1| 15657 15451 -3 - 207 hypothetical protein - none -
fig|6666666.67444.peg.2230 CDS gi|387983745|gb|AJVH01000003.1| 15887 16012 2 + 126 Putative membrane protein - none -
fig|6666666.67444.peg.2231 CDS gi|387983745|gb|AJVH01000003.1| 16672 16157 -1 - 516 Putative membrane protein - none -
fig|6666666.67444.peg.2232 CDS gi|387983745|gb|AJVH01000003.1| 16940 16677 -2 - 264 Putative regulatory protein - none -
fig|6666666.67444.peg.2233 CDS gi|387983745|gb|AJVH01000003.1| 17382 16990 -3 - 393 hypothetical protein - none -
fig|6666666.67444.peg.2234 CDS gi|387983745|gb|AJVH01000003.1| 17945 17415 -2 - 531 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.67444.peg.2235 CDS gi|387983745|gb|AJVH01000003.1| 19414 17975 -1 - 1440 FIG00544464: hypothetical protein - none -
fig|6666666.67444.peg.2236 CDS gi|387983745|gb|AJVH01000003.1| 20108 19407 -2 - 702 ABC transport system ATP-binding protein - none -
fig|6666666.67444.peg.2237 CDS gi|387983745|gb|AJVH01000003.1| 20806 20147 -1 - 660 two-component response regulator - none -
fig|6666666.67444.peg.2238 CDS gi|387983745|gb|AJVH01000003.1| 21972 20806 -3 - 1167 two-component system sensor kinase - none -
fig|6666666.67444.peg.2239 CDS gi|387983745|gb|AJVH01000003.1| 22387 22130 -1 - 258 Putative membrane protein - none -
fig|6666666.67444.peg.2240 CDS gi|387983745|gb|AJVH01000003.1| 23414 22740 -2 - 675 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67444.peg.2241 CDS gi|387983745|gb|AJVH01000003.1| 24062 23421 -2 - 642 choline transport system permease protein - none -
fig|6666666.67444.peg.2242 CDS gi|387983745|gb|AJVH01000003.1| 24883 24053 -1 - 831 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67444.peg.2243 CDS gi|387983745|gb|AJVH01000003.1| 25501 24893 -1 - 609 FIG111991: hypothetical protein CBSS-313593.3.peg.2729
fig|6666666.67444.peg.2244 CDS gi|387983745|gb|AJVH01000003.1| 26058 25498 -3 - 561 RNA polymerase sigma-70 factor CBSS-313593.3.peg.2729;
Transcription initiation, bacterial sigma factors
fig|6666666.67444.peg.2245 CDS gi|387983745|gb|AJVH01000003.1| 26354 26109 -2 - 246 No significant database matches - none -
fig|6666666.67444.peg.2246 CDS gi|387983745|gb|AJVH01000003.1| 26585 28225 2 + 1641 Putative membrane protein - none -
fig|6666666.67444.peg.2247 CDS gi|387983745|gb|AJVH01000003.1| 29059 28292 -1 - 768 transcriptional activator - none -
fig|6666666.67444.peg.2248 CDS gi|387983745|gb|AJVH01000003.1| 29290 29123 -1 - 168 hypothetical protein - none -
fig|6666666.67444.peg.2249 CDS gi|387983745|gb|AJVH01000003.1| 30647 29301 -2 - 1347 FIG016551: Putative peptidase - none -
fig|6666666.67444.peg.2250 CDS gi|387983745|gb|AJVH01000003.1| 30668 31720 2 + 1053 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67444.peg.2251 CDS gi|387983745|gb|AJVH01000003.1| 31720 31980 1 + 261 FIG00545382: hypothetical protein - none -
fig|6666666.67444.peg.2252 CDS gi|387983745|gb|AJVH01000003.1| 32368 33555 1 + 1188 periplasmic binding protein - none -
fig|6666666.67444.peg.2253 CDS gi|387983745|gb|AJVH01000003.1| 33556 34599 1 + 1044 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67444.peg.2254 CDS gi|387983745|gb|AJVH01000003.1| 34601 35359 2 + 759 Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) - none -
fig|6666666.67444.peg.2255 CDS gi|387983745|gb|AJVH01000003.1| 35449 36927 1 + 1479 hypothetical protein - none -
fig|6666666.67444.peg.2256 CDS gi|387983745|gb|AJVH01000003.1| 36945 37352 3 + 408 hypothetical protein - none -
fig|6666666.67444.peg.2257 CDS gi|387983745|gb|AJVH01000003.1| 37367 38707 2 + 1341 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase
fig|6666666.67444.peg.2258 CDS gi|387983745|gb|AJVH01000003.1| 38823 39149 3 + 327 hypothetical protein - none -
fig|6666666.67444.peg.2259 CDS gi|387983745|gb|AJVH01000003.1| 40203 39136 -3 - 1068 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67444.peg.2260 CDS gi|387983745|gb|AJVH01000003.1| 41209 40451 -1 - 759 Putative membrane protein - none -
fig|6666666.67444.peg.2261 CDS gi|387983745|gb|AJVH01000003.1| 41185 41307 1 + 123 hypothetical protein - none -
fig|6666666.67444.peg.2262 CDS gi|387983745|gb|AJVH01000003.1| 42086 41304 -2 - 783 hypothetical protein - none -
fig|6666666.67444.peg.2263 CDS gi|387983745|gb|AJVH01000003.1| 42183 42761 3 + 579 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67444.peg.2264 CDS gi|387983745|gb|AJVH01000003.1| 44499 42766 -3 - 1734 hypothetical protein - none -
fig|6666666.67444.peg.2265 CDS gi|387983745|gb|AJVH01000003.1| 45152 45000 -2 - 153 hypothetical protein - none -
fig|6666666.67444.peg.2266 CDS gi|387983745|gb|AJVH01000003.1| 45483 45322 -3 - 162 hypothetical protein - none -
fig|6666666.67444.peg.2267 CDS gi|387983745|gb|AJVH01000003.1| 45730 46341 1 + 612 carbonic anhydrase, family 3 - none -
fig|6666666.67444.peg.2268 CDS gi|387983745|gb|AJVH01000003.1| 47267 46338 -2 - 930 FIG00545208: hypothetical protein - none -
fig|6666666.67444.peg.2269 CDS gi|387983745|gb|AJVH01000003.1| 47704 49074 1 + 1371 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.67444.peg.2270 CDS gi|387983745|gb|AJVH01000003.1| 49076 49213 2 + 138 hypothetical protein - none -
fig|6666666.67444.peg.2271 CDS gi|387983745|gb|AJVH01000003.1| 49225 50310 1 + 1086 hypothetical protein - none -
fig|6666666.67444.peg.2272 CDS gi|387983745|gb|AJVH01000003.1| 50322 51935 3 + 1614 FIG00544558: hypothetical protein - none -
fig|6666666.67444.peg.2273 CDS gi|387983745|gb|AJVH01000003.1| 52044 52409 3 + 366 Transcriptional regulator, MarR family - none -
fig|6666666.67444.peg.2274 CDS gi|387983745|gb|AJVH01000003.1| 53439 52387 -3 - 1053 FIG00545643: hypothetical protein - none -
fig|6666666.67444.peg.2275 CDS gi|387983745|gb|AJVH01000003.1| 53944 53444 -1 - 501 No significant database matches - none -
fig|6666666.67444.peg.2276 CDS gi|387983745|gb|AJVH01000003.1| 54027 54797 3 + 771 FIG00545045: hypothetical protein - none -
fig|6666666.67444.peg.2277 CDS gi|387983745|gb|AJVH01000003.1| 57132 54787 -3 - 2346 ATP-dependent helicase HrpB - none -
fig|6666666.67444.peg.2278 CDS gi|387983745|gb|AJVH01000003.1| 57463 57122 -1 - 342 Putative sugar acetyltransferase - none -
fig|6666666.67444.peg.2279 CDS gi|387983745|gb|AJVH01000003.1| 57513 58205 3 + 693 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67444.peg.2280 CDS gi|387983745|gb|AJVH01000003.1| 58267 58845 1 + 579 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67444.peg.2281 CDS gi|387983745|gb|AJVH01000003.1| 58850 59578 2 + 729 putative short-chain dehydrogenase - none -
fig|6666666.67444.peg.2282 CDS gi|387983745|gb|AJVH01000003.1| 59589 59987 3 + 399 Threonine efflux protein - none -
fig|6666666.67444.peg.2283 CDS gi|387983745|gb|AJVH01000003.1| 60028 60144 1 + 117 hypothetical protein - none -
fig|6666666.67444.peg.2284 CDS gi|387983745|gb|AJVH01000003.1| 60253 61011 1 + 759 Putative lipoprotein - none -
fig|6666666.67444.peg.2285 CDS gi|387983745|gb|AJVH01000003.1| 61228 62139 1 + 912 No significant database matches - none -
fig|6666666.67444.peg.2286 CDS gi|387983745|gb|AJVH01000003.1| 62136 62813 3 + 678 Mobile element protein - none -
fig|6666666.67444.peg.2287 CDS gi|387983745|gb|AJVH01000003.1| 64284 64520 3 + 237 hypothetical protein - none -
fig|6666666.67444.peg.2288 CDS gi|387983745|gb|AJVH01000003.1| 64504 64767 1 + 264 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.67444.peg.2289 CDS gi|387983745|gb|AJVH01000003.1| 64887 65186 3 + 300 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67444.peg.2290 CDS gi|387983745|gb|AJVH01000003.1| 65186 66010 2 + 825 lactoylglutathione lyase-like protein - none -
fig|6666666.67444.peg.2291 CDS gi|387983745|gb|AJVH01000003.1| 66016 66321 1 + 306 FIG00545554: hypothetical protein - none -
fig|6666666.67444.peg.2292 CDS gi|387983745|gb|AJVH01000003.1| 67251 66331 -3 - 921 FIG00544069: hypothetical protein - none -
fig|6666666.67444.peg.2293 CDS gi|387983745|gb|AJVH01000003.1| 67391 68017 2 + 627 No significant database matches - none -
fig|6666666.67444.peg.2294 CDS gi|387983745|gb|AJVH01000003.1| 70019 68025 -2 - 1995 putative endopeptidase - none -
fig|6666666.67444.peg.2295 CDS gi|387983745|gb|AJVH01000003.1| 70062 70694 3 + 633 FIG00546916: hypothetical protein - none -
fig|6666666.67444.peg.2296 CDS gi|387983745|gb|AJVH01000003.1| 70691 71611 2 + 921 FIG00547725: hypothetical protein - none -
fig|6666666.67444.peg.2297 CDS gi|387983745|gb|AJVH01000003.1| 71601 72509 3 + 909 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67444.peg.2298 CDS gi|387983745|gb|AJVH01000003.1| 72784 72530 -1 - 255 Putative secreted protein - none -
fig|6666666.67444.peg.2299 CDS gi|387983745|gb|AJVH01000003.1| 72807 72983 3 + 177 hypothetical protein - none -
fig|6666666.67444.peg.2300 CDS gi|387983745|gb|AJVH01000003.1| 76618 73193 -1 - 3426 putative arabinosyltransferase - none -
fig|6666666.67444.peg.2301 CDS gi|387983745|gb|AJVH01000003.1| 78611 76611 -2 - 2001 putative membrane protein - none -
fig|6666666.67444.peg.2302 CDS gi|387983745|gb|AJVH01000003.1| 79567 78806 -1 - 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67444.peg.2303 CDS gi|387983745|gb|AJVH01000003.1| 81053 79587 -2 - 1467 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67444.peg.2304 CDS gi|387983745|gb|AJVH01000003.1| 81316 81170 -1 - 147 FIG00543901: hypothetical protein - none -
fig|6666666.67444.peg.2305 CDS gi|387983745|gb|AJVH01000003.1| 81315 81881 3 + 567 FIG00544111: hypothetical protein - none -
fig|6666666.67444.peg.2306 CDS gi|387983745|gb|AJVH01000003.1| 81878 82426 2 + 549 FIG00547084: hypothetical protein - none -
fig|6666666.67444.peg.2307 CDS gi|387983745|gb|AJVH01000003.1| 82438 82857 1 + 420 FIG00544442: hypothetical protein - none -
fig|6666666.67444.peg.2308 CDS gi|387983745|gb|AJVH01000003.1| 83068 83847 1 + 780 hypothetical protein - none -
fig|6666666.67444.peg.2309 CDS gi|387983745|gb|AJVH01000003.1| 84898 83981 -1 - 918 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67444.peg.2310 CDS gi|387983745|gb|AJVH01000003.1| 85072 86037 1 + 966 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.67444.peg.2311 CDS gi|387983745|gb|AJVH01000003.1| 86137 86871 1 + 735 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67444.peg.2312 CDS gi|387983745|gb|AJVH01000003.1| 86868 87767 3 + 900 FIG00549834: hypothetical protein - none -
fig|6666666.67444.peg.2313 CDS gi|387983745|gb|AJVH01000003.1| 87764 88615 2 + 852 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.67444.peg.2314 CDS gi|387983745|gb|AJVH01000003.1| 88700 89737 2 + 1038 Putative membrane protein - none -
fig|6666666.67444.peg.2315 CDS gi|387983745|gb|AJVH01000003.1| 90582 89803 -3 - 780 O-antigen export system, ATP-binding protein - none -
fig|6666666.67444.peg.2316 CDS gi|387983745|gb|AJVH01000003.1| 91506 90601 -3 - 906 O-antigen export system permease protein RfbD - none -
fig|6666666.67444.peg.2317 CDS gi|387983745|gb|AJVH01000003.1| 91598 92791 2 + 1194 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67444.peg.2318 CDS gi|387983745|gb|AJVH01000003.1| 93735 92788 -3 - 948 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67444.peg.2319 CDS gi|387983745|gb|AJVH01000003.1| 94081 93932 -1 - 150 hypothetical protein - none -
fig|6666666.67444.peg.2320 CDS gi|387983745|gb|AJVH01000003.1| 95125 94091 -1 - 1035 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67444.peg.2321 CDS gi|387983745|gb|AJVH01000003.1| 95964 95716 -3 - 249 hypothetical protein - none -
fig|6666666.67444.peg.2322 CDS gi|387983745|gb|AJVH01000003.1| 95929 97503 1 + 1575 di- and tricarboxylate transporter - none -
fig|6666666.67444.peg.2323 CDS gi|387983857|gb|AJVH01000002.1| 923 654 -2 - 270 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67444.peg.2324 CDS gi|387983857|gb|AJVH01000002.1| 3061 1040 -1 - 2022 Serine/threonine-protein kinase PknB (EC 2.7.11.1) - none -
fig|6666666.67444.peg.2325 CDS gi|387983857|gb|AJVH01000002.1| 4563 3058 -3 - 1506 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67444.peg.2326 CDS gi|387983857|gb|AJVH01000002.1| 6036 4576 -3 - 1461 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67444.peg.2327 CDS gi|387983857|gb|AJVH01000002.1| 7382 6033 -2 - 1350 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67444.peg.2328 CDS gi|387983857|gb|AJVH01000002.1| 8837 7383 -2 - 1455 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67444.peg.2329 CDS gi|387983857|gb|AJVH01000002.1| 9304 8837 -1 - 468 FIG00818182: hypothetical protein - none -
fig|6666666.67444.peg.2330 CDS gi|387983857|gb|AJVH01000002.1| 10204 9338 -1 - 867 FIG00543872: hypothetical protein - none -
fig|6666666.67444.peg.2331 CDS gi|387983857|gb|AJVH01000002.1| 10991 10869 -2 - 123 Mobile element protein - none -
fig|6666666.67444.peg.2332 CDS gi|387983857|gb|AJVH01000002.1| 13057 11159 -1 - 1899 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67444.peg.2333 CDS gi|387983857|gb|AJVH01000002.1| 13194 13439 3 + 246 FIG00544468: hypothetical protein - none -
fig|6666666.67444.peg.2334 CDS gi|387983857|gb|AJVH01000002.1| 13598 13446 -2 - 153 Cation transport ATPase - none -
fig|6666666.67444.peg.2335 CDS gi|387983857|gb|AJVH01000002.1| 15013 13886 -1 - 1128 two-component system, sensory transduction histidine kinase - none -
fig|6666666.67444.peg.2336 CDS gi|387983857|gb|AJVH01000002.1| 15690 15010 -3 - 681 two-component system, response regulator - none -
fig|6666666.67444.peg.2337 CDS gi|387983857|gb|AJVH01000002.1| 15721 15876 1 + 156 hypothetical protein - none -
fig|6666666.67444.peg.2338 CDS gi|387983857|gb|AJVH01000002.1| 16136 16711 2 + 576 putative exported protein - none -
fig|6666666.67444.peg.2339 CDS gi|387983857|gb|AJVH01000002.1| 17158 18264 1 + 1107 Multicopper oxidase Copper homeostasis
fig|6666666.67444.peg.2340 CDS gi|387983857|gb|AJVH01000002.1| 18550 18242 -1 - 309 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67444.peg.2341 CDS gi|387983857|gb|AJVH01000002.1| 19356 19562 3 + 207 hypothetical protein - none -
fig|6666666.67444.peg.2342 CDS gi|387983857|gb|AJVH01000002.1| 19946 20545 2 + 600 cadmium resistance transporter, putative - none -
fig|6666666.67444.peg.2343 CDS gi|387983857|gb|AJVH01000002.1| 21731 21300 -2 - 432 hypothetical protein - none -
fig|6666666.67444.peg.2344 CDS gi|387983883|gb|AJVH01000001.1| 288 22 -3 - 267 Transposase, IS4 - none -
fig|6666666.67444.peg.2345 CDS gi|387983883|gb|AJVH01000001.1| 1563 301 -3 - 1263 Transposase, IS4 - none -
fig|6666666.67444.rna.1 RNA gi|387981563|gb|AJVH01000031.1| 270 1754 3 + 1485 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67444.rna.2 RNA gi|387981563|gb|AJVH01000031.1| 2122 5227 1 + 3106 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67444.rna.3 RNA gi|387981592|gb|AJVH01000029.1| 132817 132890 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.67444.rna.4 RNA gi|387981592|gb|AJVH01000029.1| 132903 132975 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67444.rna.5 RNA gi|387981592|gb|AJVH01000029.1| 140055 140128 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.67444.rna.6 RNA gi|387981592|gb|AJVH01000029.1| 140141 140213 2 + 73 tRNA-Ala-TGC - none -
fig|6666666.67444.rna.7 RNA gi|387981592|gb|AJVH01000029.1| 141201 141273 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67444.rna.8 RNA gi|387981740|gb|AJVH01000028.1| 18872 18942 2 + 71 tRNA-Gly-CCC - none -
fig|6666666.67444.rna.9 RNA gi|387981919|gb|AJVH01000021.1| 160 88 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.67444.rna.10 RNA gi|387981919|gb|AJVH01000021.1| 47385 47313 -3 - 73 tRNA-Thr-TGT - none -
fig|6666666.67444.rna.11 RNA gi|387982061|gb|AJVH01000020.1| 5708 5636 -2 - 73 tRNA-Phe-GAA - none -
fig|6666666.67444.rna.12 RNA gi|387982061|gb|AJVH01000020.1| 5804 5731 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.67444.rna.13 RNA gi|387982061|gb|AJVH01000020.1| 7243 7170 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.67444.rna.14 RNA gi|387982061|gb|AJVH01000020.1| 7345 7273 -1 - 73 tRNA-Glu-TTC - none -
fig|6666666.67444.rna.15 RNA gi|387982075|gb|AJVH01000019.1| 18243 18171 -3 - 73 tRNA-Ala-GGC - none -
fig|6666666.67444.rna.16 RNA gi|387982107|gb|AJVH01000017.1| 17518 17437 -1 - 82 tRNA-Leu-TAG - none -
fig|6666666.67444.rna.17 RNA gi|387982137|gb|AJVH01000016.1| 1617 1544 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.67444.rna.18 RNA gi|387982137|gb|AJVH01000016.1| 4306 4378 1 + 73 tRNA-His-GTG - none -
fig|6666666.67444.rna.19 RNA gi|387982137|gb|AJVH01000016.1| 6723 6795 3 + 73 tRNA-Lys-CTT - none -
fig|6666666.67444.rna.20 RNA gi|387982167|gb|AJVH01000015.1| 147768 147696 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.67444.rna.21 RNA gi|387982167|gb|AJVH01000015.1| 160000 159928 -1 - 73 tRNA-Asn-GTT - none -
fig|6666666.67444.rna.22 RNA gi|387982167|gb|AJVH01000015.1| 160179 160252 3 + 74 tRNA-Met-CAT - none -
fig|6666666.67444.rna.23 RNA gi|387982167|gb|AJVH01000015.1| 260552 260479 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.67444.rna.24 RNA gi|387982167|gb|AJVH01000015.1| 260965 260894 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.67444.rna.25 RNA gi|387982435|gb|AJVH01000013.1| 25856 25929 2 + 74 tRNA-Pro-GGG - none -
fig|6666666.67444.rna.26 RNA gi|387982435|gb|AJVH01000013.1| 99408 99493 3 + 86 tRNA-Leu-GAG - none -
fig|6666666.67444.rna.27 RNA gi|387982435|gb|AJVH01000013.1| 232055 231984 -2 - 72 tRNA-Val-CAC - none -
fig|6666666.67444.rna.28 RNA gi|387982435|gb|AJVH01000013.1| 232343 232415 2 + 73 tRNA-Gly-GCC - none -
fig|6666666.67444.rna.29 RNA gi|387982435|gb|AJVH01000013.1| 232433 232504 2 + 72 tRNA-Val-GAC - none -
fig|6666666.67444.rna.30 RNA gi|387982435|gb|AJVH01000013.1| 232538 232610 2 + 73 tRNA-Gly-GCC - none -
fig|6666666.67444.rna.31 RNA gi|387982770|gb|AJVH01000012.1| 30522 30450 -3 - 73 tRNA-Arg-CCT - none -
fig|6666666.67444.rna.32 RNA gi|387982770|gb|AJVH01000012.1| 117214 117285 1 + 72 tRNA-Gln-TTG - none -
fig|6666666.67444.rna.33 RNA gi|387982770|gb|AJVH01000012.1| 129670 129743 1 + 74 tRNA-Leu-TAA - none -
fig|6666666.67444.rna.34 RNA gi|387982770|gb|AJVH01000012.1| 243085 243013 -1 - 73 tRNA-Arg-CCG - none -
fig|6666666.67444.rna.35 RNA gi|387982770|gb|AJVH01000012.1| 335210 335281 2 + 72 tRNA-Gln-CTG - none -
fig|6666666.67444.rna.36 RNA gi|387982770|gb|AJVH01000012.1| 335315 335387 2 + 73 tRNA-Glu-CTC - none -
fig|6666666.67444.rna.37 RNA gi|387982770|gb|AJVH01000012.1| 339319 339391 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.67444.rna.38 RNA gi|387982770|gb|AJVH01000012.1| 362943 362870 -3 - 74 tRNA-Leu-CAA - none -
fig|6666666.67444.rna.39 RNA gi|387983189|gb|AJVH01000008.1| 71255 71336 2 + 82 tRNA-Tyr-GTA - none -
fig|6666666.67444.rna.40 RNA gi|387983189|gb|AJVH01000008.1| 71528 71600 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.67444.rna.41 RNA gi|387983189|gb|AJVH01000008.1| 71639 71710 2 + 72 tRNA-Met-CAT - none -
fig|6666666.67444.rna.42 RNA gi|387983189|gb|AJVH01000008.1| 71739 71811 3 + 73 tRNA-Trp-CCA - none -
fig|6666666.67444.rna.43 RNA gi|387983189|gb|AJVH01000008.1| 381974 382047 2 + 74 tRNA-Met-CAT - none -
fig|6666666.67444.rna.44 RNA gi|387983572|gb|AJVH01000006.1| 28095 28022 -3 - 74 tRNA-Pro-CGG - none -
fig|6666666.67444.rna.45 RNA gi|387983572|gb|AJVH01000006.1| 68756 68828 2 + 73 tRNA-Thr-CGT - none -
fig|6666666.67444.rna.46 RNA gi|387983648|gb|AJVH01000005.1| 19672 19759 1 + 88 tRNA-Ser-CGA - none -
fig|6666666.67444.rna.47 RNA gi|387983648|gb|AJVH01000005.1| 29881 29796 -1 - 86 tRNA-Pseudo-GGA - none -
fig|6666666.67444.rna.48 RNA gi|387983745|gb|AJVH01000003.1| 93822 93906 3 + 85 tRNA-Ser-TGA - none -
fig|6666666.67444.rna.49 RNA gi|387983745|gb|AJVH01000003.1| 95233 95321 1 + 89 tRNA-Pseudo-GCT - none -
fig|6666666.67444.rna.50 RNA gi|387983745|gb|AJVH01000003.1| 95369 95441 2 + 73 tRNA-Arg-ACG - none -
fig|6666666.67444.rna.51 RNA gi|387983857|gb|AJVH01000002.1| 10425 10508 3 + 84 tRNA-Leu-CAG - none -