fig|6666666.67457.peg.1 CDS gi|227860922|gb|ACLI01000136.1| 840 574 -3 - 267 Mobile element protein - none -
fig|6666666.67457.peg.2 CDS gi|227860923|gb|ACLI01000135.1| 83 1531 2 + 1449 hypothetical protein - none -
fig|6666666.67457.peg.3 CDS gi|227860924|gb|ACLI01000134.1| 60 1724 3 + 1665 hypothetical protein - none -
fig|6666666.67457.peg.4 CDS gi|227860924|gb|ACLI01000134.1| 1881 2147 3 + 267 hypothetical protein - none -
fig|6666666.67457.peg.5 CDS gi|227860924|gb|ACLI01000134.1| 2636 5866 2 + 3231 hypothetical protein - none -
fig|6666666.67457.peg.6 CDS gi|227860924|gb|ACLI01000134.1| 7109 7696 2 + 588 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67457.peg.7 CDS gi|227860924|gb|ACLI01000134.1| 7693 7965 1 + 273 hypothetical protein - none -
fig|6666666.67457.peg.8 CDS gi|227860924|gb|ACLI01000134.1| 8389 8276 -1 - 114 hypothetical protein - none -
fig|6666666.67457.peg.9 CDS gi|227860926|gb|ACLI01000132.1| 2147 2437 2 + 291 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67457.peg.10 CDS gi|227860926|gb|ACLI01000132.1| 2418 3269 3 + 852 hypothetical protein - none -
fig|6666666.67457.peg.11 CDS gi|227860926|gb|ACLI01000132.1| 3417 4772 3 + 1356 hypothetical protein - none -
fig|6666666.67457.peg.12 CDS gi|227860926|gb|ACLI01000132.1| 5343 5744 3 + 402 Plasmid partitioning protein ParA - none -
fig|6666666.67457.peg.13 CDS gi|227860926|gb|ACLI01000132.1| 7590 7477 -3 - 114 hypothetical protein - none -
fig|6666666.67457.peg.14 CDS gi|227860928|gb|ACLI01000130.1| 379 32 -1 - 348 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.67457.peg.15 CDS gi|227860928|gb|ACLI01000130.1| 1195 446 -1 - 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67457.peg.16 CDS gi|227860928|gb|ACLI01000130.1| 3207 1195 -3 - 2013 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67457.peg.17 CDS gi|227860928|gb|ACLI01000130.1| 3908 3228 -2 - 681 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67457.peg.18 CDS gi|227860928|gb|ACLI01000130.1| 4643 5965 2 + 1323 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.67457.peg.19 CDS gi|227860928|gb|ACLI01000130.1| 6481 6023 -1 - 459 Transcriptional regulator - none -
fig|6666666.67457.peg.20 CDS gi|227860928|gb|ACLI01000130.1| 8010 6601 -3 - 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.67457.peg.21 CDS gi|227860928|gb|ACLI01000130.1| 8752 10035 1 + 1284 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67457.peg.22 CDS gi|227860928|gb|ACLI01000130.1| 12094 13488 1 + 1395 hypothetical protein - none -
fig|6666666.67457.peg.23 CDS gi|227860928|gb|ACLI01000130.1| 13503 14717 3 + 1215 hypothetical protein - none -
fig|6666666.67457.peg.24 CDS gi|227860929|gb|ACLI01000129.1| 1021 1830 1 + 810 hypothetical protein - none -
fig|6666666.67457.peg.25 CDS gi|227860929|gb|ACLI01000129.1| 1999 2727 1 + 729 hypothetical protein - none -
fig|6666666.67457.peg.26 CDS gi|227860929|gb|ACLI01000129.1| 4501 6774 1 + 2274 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67457.peg.27 CDS gi|227860929|gb|ACLI01000129.1| 6788 7114 2 + 327 hypothetical protein - none -
fig|6666666.67457.peg.28 CDS gi|227860929|gb|ACLI01000129.1| 7262 7921 2 + 660 hypothetical protein - none -
fig|6666666.67457.peg.29 CDS gi|227860929|gb|ACLI01000129.1| 9051 7927 -3 - 1125 putative transport protein - none -
fig|6666666.67457.peg.30 CDS gi|227860929|gb|ACLI01000129.1| 10796 9090 -2 - 1707 Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9); Fructose-6-phosphate phosphoketolase (EC 4.1.2.22) Fermentations: Lactate;
Fermentations: Lactate;
Pentose phosphate pathway;
Pentose phosphate pathway
fig|6666666.67457.peg.31 CDS gi|227860929|gb|ACLI01000129.1| 11029 11226 1 + 198 hypothetical protein - none -
fig|6666666.67457.peg.32 CDS gi|227860929|gb|ACLI01000129.1| 11976 11302 -3 - 675 Deoxyribose-phosphate aldolase (EC 4.1.2.4) - none -
fig|6666666.67457.peg.33 CDS gi|227860929|gb|ACLI01000129.1| 12042 12959 3 + 918 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.67457.peg.34 CDS gi|227860929|gb|ACLI01000129.1| 16249 14666 -1 - 1584 Permeases of the major facilitator superfamily - none -
fig|6666666.67457.peg.35 CDS gi|227860929|gb|ACLI01000129.1| 16899 16246 -3 - 654 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.36 CDS gi|227860929|gb|ACLI01000129.1| 17342 17046 -2 - 297 FIG00544086: hypothetical protein - none -
fig|6666666.67457.peg.37 CDS gi|227860929|gb|ACLI01000129.1| 17823 17365 -3 - 459 FIG00545952: hypothetical protein - none -
fig|6666666.67457.peg.38 CDS gi|227860929|gb|ACLI01000129.1| 19241 17850 -2 - 1392 FIG00544632: hypothetical protein - none -
fig|6666666.67457.peg.39 CDS gi|227860929|gb|ACLI01000129.1| 19302 20288 3 + 987 FIG00547005: hypothetical protein - none -
fig|6666666.67457.peg.40 CDS gi|227860929|gb|ACLI01000129.1| 20470 20285 -1 - 186 hypothetical protein - none -
fig|6666666.67457.peg.41 CDS gi|227860930|gb|ACLI01000128.1| 1309 851 -1 - 459 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67457.peg.42 CDS gi|227860930|gb|ACLI01000128.1| 3221 1353 -2 - 1869 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) Pterin carbinolamine dehydratase
fig|6666666.67457.peg.43 CDS gi|227860930|gb|ACLI01000128.1| 4819 3221 -1 - 1599 permease of the major facilitator superfamily - none -
fig|6666666.67457.peg.44 CDS gi|227860930|gb|ACLI01000128.1| 5163 6152 3 + 990 FIG00545601: hypothetical protein - none -
fig|6666666.67457.peg.45 CDS gi|227860930|gb|ACLI01000128.1| 6682 6149 -1 - 534 ThiJ/PfpI family protein - none -
fig|6666666.67457.peg.46 CDS gi|227860930|gb|ACLI01000128.1| 7151 6783 -2 - 369 FIG00548314: hypothetical protein - none -
fig|6666666.67457.peg.47 CDS gi|227860930|gb|ACLI01000128.1| 8240 7341 -2 - 900 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.48 CDS gi|227860930|gb|ACLI01000128.1| 9606 8266 -3 - 1341 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.49 CDS gi|227860930|gb|ACLI01000128.1| 9943 9761 -1 - 183 Glutaredoxin-like domain protein - none -
fig|6666666.67457.peg.50 CDS gi|227860930|gb|ACLI01000128.1| 10115 11269 2 + 1155 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.51 CDS gi|227860930|gb|ACLI01000128.1| 12143 11946 -2 - 198 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67457.peg.52 CDS gi|227860930|gb|ACLI01000128.1| 13205 12384 -2 - 822 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67457.peg.53 CDS gi|227860930|gb|ACLI01000128.1| 14361 13327 -3 - 1035 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.67457.peg.54 CDS gi|227860930|gb|ACLI01000128.1| 15210 14386 -3 - 825 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67457.peg.55 CDS gi|227860930|gb|ACLI01000128.1| 15349 16323 1 + 975 FIG00543972: hypothetical protein - none -
fig|6666666.67457.peg.56 CDS gi|227860930|gb|ACLI01000128.1| 16404 16520 3 + 117 hypothetical protein - none -
fig|6666666.67457.peg.57 CDS gi|227860930|gb|ACLI01000128.1| 16576 19218 1 + 2643 FIG00547394: hypothetical protein - none -
fig|6666666.67457.peg.58 CDS gi|227860930|gb|ACLI01000128.1| 20037 19339 -3 - 699 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67457.peg.59 CDS gi|227860930|gb|ACLI01000128.1| 21275 20034 -2 - 1242 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67457.peg.60 CDS gi|227860930|gb|ACLI01000128.1| 22061 21315 -2 - 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67457.peg.61 CDS gi|227860930|gb|ACLI01000128.1| 23407 22133 -1 - 1275 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67457.peg.62 CDS gi|227860930|gb|ACLI01000128.1| 23490 25229 3 + 1740 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67457.peg.63 CDS gi|227860930|gb|ACLI01000128.1| 26565 25873 -3 - 693 hypothetical protein - none -
fig|6666666.67457.peg.64 CDS gi|227860930|gb|ACLI01000128.1| 27369 26749 -3 - 621 FIG00545254: hypothetical protein - none -
fig|6666666.67457.peg.65 CDS gi|227860930|gb|ACLI01000128.1| 28483 27350 -1 - 1134 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67457.peg.66 CDS gi|227860930|gb|ACLI01000128.1| 28508 29011 2 + 504 FIG00546961: hypothetical protein - none -
fig|6666666.67457.peg.67 CDS gi|227860930|gb|ACLI01000128.1| 29024 29842 2 + 819 Uncharacterized protein SCO4203 - none -
fig|6666666.67457.peg.68 CDS gi|227860931|gb|ACLI01000127.1| 20 280 2 + 261 Ferric iron ABC transporter, permease protein - none -
fig|6666666.67457.peg.69 CDS gi|227860931|gb|ACLI01000127.1| 286 1335 1 + 1050 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.70 CDS gi|227860932|gb|ACLI01000126.1| 285 716 3 + 432 FIG00545647: hypothetical protein - none -
fig|6666666.67457.peg.71 CDS gi|227860932|gb|ACLI01000126.1| 869 1999 2 + 1131 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67457.peg.72 CDS gi|227860932|gb|ACLI01000126.1| 2869 2003 -1 - 867 FIG00544751: hypothetical protein - none -
fig|6666666.67457.peg.73 CDS gi|227860932|gb|ACLI01000126.1| 3018 3929 3 + 912 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67457.peg.74 CDS gi|227860932|gb|ACLI01000126.1| 4285 3956 -1 - 330 FIG00544880: hypothetical protein - none -
fig|6666666.67457.peg.75 CDS gi|227860932|gb|ACLI01000126.1| 4395 4730 3 + 336 FIG00544106: hypothetical protein - none -
fig|6666666.67457.peg.76 CDS gi|227860932|gb|ACLI01000126.1| 4934 5194 2 + 261 putative transcription repressor - none -
fig|6666666.67457.peg.77 CDS gi|227860932|gb|ACLI01000126.1| 6389 5316 -2 - 1074 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67457.peg.78 CDS gi|227860932|gb|ACLI01000126.1| 8186 6552 -2 - 1635 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67457.peg.79 CDS gi|227860932|gb|ACLI01000126.1| 8209 8355 1 + 147 hypothetical protein - none -
fig|6666666.67457.peg.80 CDS gi|227860932|gb|ACLI01000126.1| 9154 8348 -1 - 807 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67457.peg.81 CDS gi|227860932|gb|ACLI01000126.1| 9779 9156 -2 - 624 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67457.peg.82 CDS gi|227860932|gb|ACLI01000126.1| 10394 9786 -2 - 609 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67457.peg.83 CDS gi|227860932|gb|ACLI01000126.1| 11792 10464 -2 - 1329 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.84 CDS gi|227860932|gb|ACLI01000126.1| 13239 11842 -3 - 1398 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.85 CDS gi|227860932|gb|ACLI01000126.1| 14342 13263 -2 - 1080 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.86 CDS gi|227860932|gb|ACLI01000126.1| 17203 14501 -1 - 2703 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67457.peg.87 CDS gi|227860932|gb|ACLI01000126.1| 17832 17332 -3 - 501 TerC family integral membrane protein - none -
fig|6666666.67457.peg.88 CDS gi|227860932|gb|ACLI01000126.1| 18565 17951 -1 - 615 FIG00543961: hypothetical protein - none -
fig|6666666.67457.peg.89 CDS gi|227860932|gb|ACLI01000126.1| 19607 18588 -2 - 1020 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.90 CDS gi|227860932|gb|ACLI01000126.1| 20429 19776 -2 - 654 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.67457.peg.91 CDS gi|227860932|gb|ACLI01000126.1| 21682 20621 -1 - 1062 Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter - none -
fig|6666666.67457.peg.92 CDS gi|227860932|gb|ACLI01000126.1| 23659 21875 -1 - 1785 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.93 CDS gi|227860932|gb|ACLI01000126.1| 24364 25104 1 + 741 hypothetical protein - none -
fig|6666666.67457.peg.94 CDS gi|227860932|gb|ACLI01000126.1| 25213 26298 1 + 1086 Fe3+/thiamine transport system, secreted component; ABC transporter substrate-binding protein - none -
fig|6666666.67457.peg.95 CDS gi|227860933|gb|ACLI01000125.1| 4498 497 -1 - 4002 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67457.peg.96 CDS gi|227860933|gb|ACLI01000125.1| 8058 4579 -3 - 3480 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67457.peg.97 CDS gi|227860933|gb|ACLI01000125.1| 9554 8565 -2 - 990 FIG00545886: hypothetical protein - none -
fig|6666666.67457.peg.98 CDS gi|227860933|gb|ACLI01000125.1| 10117 9731 -1 - 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67457.peg.99 CDS gi|227860933|gb|ACLI01000125.1| 10709 10194 -2 - 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67457.peg.100 CDS gi|227860933|gb|ACLI01000125.1| 12429 11041 -3 - 1389 Phytoene dehydrogenase and related proteins Carotenoids
fig|6666666.67457.peg.101 CDS gi|227860933|gb|ACLI01000125.1| 12640 12473 -1 - 168 hypothetical protein - none -
fig|6666666.67457.peg.102 CDS gi|227860933|gb|ACLI01000125.1| 13029 12649 -3 - 381 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.103 CDS gi|227860933|gb|ACLI01000125.1| 13546 13013 -1 - 534 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.104 CDS gi|227860933|gb|ACLI01000125.1| 14750 14040 -2 - 711 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67457.peg.105 CDS gi|227860933|gb|ACLI01000125.1| 14781 14894 3 + 114 hypothetical protein - none -
fig|6666666.67457.peg.106 CDS gi|227860933|gb|ACLI01000125.1| 15312 14878 -3 - 435 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67457.peg.107 CDS gi|227860933|gb|ACLI01000125.1| 16510 15647 -1 - 864 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67457.peg.108 CDS gi|227860933|gb|ACLI01000125.1| 17065 16736 -1 - 330 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67457.peg.109 CDS gi|227860933|gb|ACLI01000125.1| 19238 18309 -2 - 930 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67457.peg.110 CDS gi|227860933|gb|ACLI01000125.1| 19523 20809 2 + 1287 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67457.peg.111 CDS gi|227860933|gb|ACLI01000125.1| 21470 20823 -2 - 648 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67457.peg.112 CDS gi|227860933|gb|ACLI01000125.1| 22809 21580 -3 - 1230 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67457.peg.113 CDS gi|227860933|gb|ACLI01000125.1| 23324 22926 -2 - 399 FIG00543979: hypothetical protein - none -
fig|6666666.67457.peg.114 CDS gi|227860933|gb|ACLI01000125.1| 24995 23364 -2 - 1632 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67457.peg.115 CDS gi|227860933|gb|ACLI01000125.1| 26022 25006 -3 - 1017 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67457.peg.116 CDS gi|227860933|gb|ACLI01000125.1| 26078 26383 2 + 306 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) Pterin carbinolamine dehydratase
fig|6666666.67457.peg.117 CDS gi|227860933|gb|ACLI01000125.1| 26427 27386 3 + 960 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67457.peg.118 CDS gi|227860933|gb|ACLI01000125.1| 27918 29180 3 + 1263 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67457.peg.119 CDS gi|227860937|gb|ACLI01000121.1| 3520 3669 1 + 150 hypothetical protein - none -
fig|6666666.67457.peg.120 CDS gi|227860939|gb|ACLI01000119.1| 931 26 -1 - 906 Mobile element protein - none -
fig|6666666.67457.peg.121 CDS gi|227860940|gb|ACLI01000118.1| 240 1010 3 + 771 hypothetical protein - none -
fig|6666666.67457.peg.122 CDS gi|227860940|gb|ACLI01000118.1| 1429 5274 1 + 3846 hypothetical protein - none -
fig|6666666.67457.peg.123 CDS gi|227860940|gb|ACLI01000118.1| 5271 6896 3 + 1626 hypothetical protein - none -
fig|6666666.67457.peg.124 CDS gi|227860940|gb|ACLI01000118.1| 7525 7749 1 + 225 hypothetical protein - none -
fig|6666666.67457.peg.125 CDS gi|227860940|gb|ACLI01000118.1| 8118 8471 3 + 354 putative ferredoxin - none -
fig|6666666.67457.peg.126 CDS gi|227860940|gb|ACLI01000118.1| 8618 8935 2 + 318 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.67457.peg.127 CDS gi|227860940|gb|ACLI01000118.1| 9497 9075 -2 - 423 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.67457.peg.128 CDS gi|227860940|gb|ACLI01000118.1| 11055 9553 -3 - 1503 permease - none -
fig|6666666.67457.peg.129 CDS gi|227860940|gb|ACLI01000118.1| 12433 11156 -1 - 1278 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.67457.peg.130 CDS gi|227860940|gb|ACLI01000118.1| 12613 15486 1 + 2874 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67457.peg.131 CDS gi|227860940|gb|ACLI01000118.1| 16187 15570 -2 - 618 FIG00546334: hypothetical protein - none -
fig|6666666.67457.peg.132 CDS gi|227860940|gb|ACLI01000118.1| 16487 16816 2 + 330 hypothetical protein - none -
fig|6666666.67457.peg.133 CDS gi|227860940|gb|ACLI01000118.1| 16833 16979 3 + 147 hypothetical protein - none -
fig|6666666.67457.peg.134 CDS gi|227860940|gb|ACLI01000118.1| 16979 18202 2 + 1224 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.67457.peg.135 CDS gi|227860940|gb|ACLI01000118.1| 18307 18897 1 + 591 FIG00546992: hypothetical protein - none -
fig|6666666.67457.peg.136 CDS gi|227860940|gb|ACLI01000118.1| 19355 18942 -2 - 414 hypothetical protein - none -
fig|6666666.67457.peg.137 CDS gi|227860940|gb|ACLI01000118.1| 19739 20308 2 + 570 Conserved integral membrane protein - none -
fig|6666666.67457.peg.138 CDS gi|227860940|gb|ACLI01000118.1| 20422 21963 1 + 1542 sugar kinase - none -
fig|6666666.67457.peg.139 CDS gi|227860940|gb|ACLI01000118.1| 23146 21968 -1 - 1179 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67457.peg.140 CDS gi|227860940|gb|ACLI01000118.1| 23298 24299 3 + 1002 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.67457.peg.141 CDS gi|227860940|gb|ACLI01000118.1| 24305 24799 2 + 495 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67457.peg.142 CDS gi|227860940|gb|ACLI01000118.1| 25296 26099 3 + 804 putative transcription regulator - none -
fig|6666666.67457.peg.143 CDS gi|227860940|gb|ACLI01000118.1| 27279 26116 -3 - 1164 RNA-2@1,3@1-PO4:RNA-5@1-OH ligase RNA 3@1-terminal phosphate cyclase;
tRNA splicing
fig|6666666.67457.peg.144 CDS gi|227860940|gb|ACLI01000118.1| 28411 27590 -1 - 822 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67457.peg.145 CDS gi|227860940|gb|ACLI01000118.1| 28616 29122 2 + 507 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.67457.peg.146 CDS gi|227860940|gb|ACLI01000118.1| 29336 30823 2 + 1488 ATP-dependent Zn protease - none -
fig|6666666.67457.peg.147 CDS gi|227860940|gb|ACLI01000118.1| 31918 30830 -1 - 1089 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67457.peg.148 CDS gi|227860940|gb|ACLI01000118.1| 32144 33082 2 + 939 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67457.peg.149 CDS gi|227860940|gb|ACLI01000118.1| 33132 33470 3 + 339 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.67457.peg.150 CDS gi|227860940|gb|ACLI01000118.1| 34053 33562 -3 - 492 hypothetical membrane protein - none -
fig|6666666.67457.peg.151 CDS gi|227860940|gb|ACLI01000118.1| 35060 34116 -2 - 945 Universal stress protein family - none -
fig|6666666.67457.peg.152 CDS gi|227860940|gb|ACLI01000118.1| 35514 35089 -3 - 426 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.153 CDS gi|227860940|gb|ACLI01000118.1| 35775 36089 3 + 315 FIG00544267: hypothetical protein - none -
fig|6666666.67457.peg.154 CDS gi|227860940|gb|ACLI01000118.1| 36181 38379 1 + 2199 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67457.peg.155 CDS gi|227860940|gb|ACLI01000118.1| 38444 39925 2 + 1482 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67457.peg.156 CDS gi|227860940|gb|ACLI01000118.1| 39925 40116 1 + 192 FIG00544411: hypothetical protein - none -
fig|6666666.67457.peg.157 CDS gi|227860940|gb|ACLI01000118.1| 40146 40259 3 + 114 hypothetical protein - none -
fig|6666666.67457.peg.158 CDS gi|227860940|gb|ACLI01000118.1| 40666 40953 1 + 288 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.67457.peg.159 CDS gi|227860940|gb|ACLI01000118.1| 40991 41689 2 + 699 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67457.peg.160 CDS gi|227860940|gb|ACLI01000118.1| 41742 42194 3 + 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67457.peg.161 CDS gi|227860940|gb|ACLI01000118.1| 42949 44532 1 + 1584 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67457.peg.162 CDS gi|227860940|gb|ACLI01000118.1| 44556 44675 3 + 120 hypothetical protein - none -
fig|6666666.67457.peg.163 CDS gi|227860940|gb|ACLI01000118.1| 44823 45401 3 + 579 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67457.peg.164 CDS gi|227860940|gb|ACLI01000118.1| 45376 45594 1 + 219 FIG00549340: hypothetical protein - none -
fig|6666666.67457.peg.165 CDS gi|227860940|gb|ACLI01000118.1| 46873 45554 -1 - 1320 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67457.peg.166 CDS gi|227860940|gb|ACLI01000118.1| 47276 47067 -2 - 210 Copper chaperone Copper homeostasis
fig|6666666.67457.peg.167 CDS gi|227860940|gb|ACLI01000118.1| 47474 47851 2 + 378 Thioredoxin - none -
fig|6666666.67457.peg.168 CDS gi|227860940|gb|ACLI01000118.1| 48074 48934 2 + 861 FIG00544174: hypothetical protein - none -
fig|6666666.67457.peg.169 CDS gi|227860940|gb|ACLI01000118.1| 50146 49007 -1 - 1140 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67457.peg.170 CDS gi|227860940|gb|ACLI01000118.1| 50494 50868 1 + 375 Transcriptional regulator, GntR family - none -
fig|6666666.67457.peg.171 CDS gi|227860941|gb|ACLI01000117.1| 11 676 2 + 666 putative transmembrane symporter - none -
fig|6666666.67457.peg.172 CDS gi|227860941|gb|ACLI01000117.1| 2096 753 -2 - 1344 Putative n-hydroxybenzoate hydroxylase Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67457.peg.173 CDS gi|227860941|gb|ACLI01000117.1| 3686 2346 -2 - 1341 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.67457.peg.174 CDS gi|227860941|gb|ACLI01000117.1| 3751 4518 1 + 768 Transcriptional regulator, IclR family - none -
fig|6666666.67457.peg.175 CDS gi|227860941|gb|ACLI01000117.1| 4881 4645 -3 - 237 hypothetical protein - none -
fig|6666666.67457.peg.176 CDS gi|227860941|gb|ACLI01000117.1| 4843 5970 1 + 1128 Gentisate 1,2-dioxygenase (EC 1.13.11.4) Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67457.peg.177 CDS gi|227860941|gb|ACLI01000117.1| 5978 6817 2 + 840 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Pterin carbinolamine dehydratase;
Salicylate and gentisate catabolism
fig|6666666.67457.peg.178 CDS gi|227860942|gb|ACLI01000116.1| 5429 873 -2 - 4557 FIG00545603: hypothetical protein - none -
fig|6666666.67457.peg.179 CDS gi|227860942|gb|ACLI01000116.1| 5743 6303 1 + 561 transcriptional regulator - none -
fig|6666666.67457.peg.180 CDS gi|227860942|gb|ACLI01000116.1| 6757 6317 -1 - 441 Organic hydroperoxide resistance transcriptional regulator CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.67457.peg.181 CDS gi|227860942|gb|ACLI01000116.1| 6868 7287 1 + 420 Organic hydroperoxide resistance protein CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.67457.peg.182 CDS gi|227860942|gb|ACLI01000116.1| 7510 7367 -1 - 144 hypothetical protein - none -
fig|6666666.67457.peg.183 CDS gi|227860942|gb|ACLI01000116.1| 9232 7730 -1 - 1503 CitH citrate transporter Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67457.peg.184 CDS gi|227860942|gb|ACLI01000116.1| 9437 11098 2 + 1662 Signal transduction histidine kinase CitA regulating citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67457.peg.185 CDS gi|227860942|gb|ACLI01000116.1| 11095 11751 1 + 657 Response regulator CitB of citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67457.peg.186 CDS gi|227860942|gb|ACLI01000116.1| 12166 13692 1 + 1527 Di/tripeptide permease DtpT Proton-dependent Peptide Transporters
fig|6666666.67457.peg.187 CDS gi|227860942|gb|ACLI01000116.1| 14469 13753 -3 - 717 short chain dehydrogenase - none -
fig|6666666.67457.peg.188 CDS gi|227860942|gb|ACLI01000116.1| 14586 17411 3 + 2826 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.67457.peg.189 CDS gi|227860942|gb|ACLI01000116.1| 17501 18796 2 + 1296 abortive infection protein, putative - none -
fig|6666666.67457.peg.190 CDS gi|227860942|gb|ACLI01000116.1| 19503 24077 3 + 4575 Type II restriction enzyme, methylase subunits - none -
fig|6666666.67457.peg.191 CDS gi|227860942|gb|ACLI01000116.1| 25641 24106 -3 - 1536 Possible restriction /modification enzyme - none -
fig|6666666.67457.peg.192 CDS gi|227860942|gb|ACLI01000116.1| 26331 32633 3 + 6303 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.67457.peg.193 CDS gi|227860942|gb|ACLI01000116.1| 32638 34971 1 + 2334 putative DNA helicase - none -
fig|6666666.67457.peg.194 CDS gi|227860942|gb|ACLI01000116.1| 35963 35028 -2 - 936 hypothetical protein - none -
fig|6666666.67457.peg.195 CDS gi|227860942|gb|ACLI01000116.1| 37395 36265 -3 - 1131 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.196 CDS gi|227860942|gb|ACLI01000116.1| 38666 37422 -2 - 1245 major facilitator superfamily MFS_1 - none -
fig|6666666.67457.peg.197 CDS gi|227860942|gb|ACLI01000116.1| 39473 38865 -2 - 609 hypothetical protein - none -
fig|6666666.67457.peg.198 CDS gi|227860942|gb|ACLI01000116.1| 39976 39470 -1 - 507 hypothetical protein - none -
fig|6666666.67457.peg.199 CDS gi|227860942|gb|ACLI01000116.1| 40797 39973 -3 - 825 hypothetical protein - none -
fig|6666666.67457.peg.200 CDS gi|227860942|gb|ACLI01000116.1| 41189 42712 2 + 1524 oxidoreductase - none -
fig|6666666.67457.peg.201 CDS gi|227860942|gb|ACLI01000116.1| 43835 42726 -2 - 1110 hypothetical protein - none -
fig|6666666.67457.peg.202 CDS gi|227860942|gb|ACLI01000116.1| 44005 44997 1 + 993 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.67457.peg.203 CDS gi|227860942|gb|ACLI01000116.1| 45841 45077 -1 - 765 hypothetical protein - none -
fig|6666666.67457.peg.204 CDS gi|227860942|gb|ACLI01000116.1| 46752 45892 -3 - 861 hypothetical protein - none -
fig|6666666.67457.peg.205 CDS gi|227860942|gb|ACLI01000116.1| 47528 46800 -2 - 729 hypothetical protein - none -
fig|6666666.67457.peg.206 CDS gi|227860942|gb|ACLI01000116.1| 47635 47790 1 + 156 hypothetical protein - none -
fig|6666666.67457.peg.207 CDS gi|227860942|gb|ACLI01000116.1| 47959 47819 -1 - 141 hypothetical protein - none -
fig|6666666.67457.peg.208 CDS gi|227860942|gb|ACLI01000116.1| 49496 48177 -2 - 1320 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67457.peg.209 CDS gi|227860942|gb|ACLI01000116.1| 50710 49730 -1 - 981 FIG00545071: hypothetical protein - none -
fig|6666666.67457.peg.210 CDS gi|227860942|gb|ACLI01000116.1| 51254 52405 2 + 1152 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.67457.peg.211 CDS gi|227860942|gb|ACLI01000116.1| 52861 52478 -1 - 384 Putative iron-sulphur protein - none -
fig|6666666.67457.peg.212 CDS gi|227860942|gb|ACLI01000116.1| 54565 52967 -1 - 1599 FIG00547304: hypothetical protein - none -
fig|6666666.67457.peg.213 CDS gi|227860942|gb|ACLI01000116.1| 55416 54562 -3 - 855 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.214 CDS gi|227860942|gb|ACLI01000116.1| 56446 55604 -1 - 843 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67457.peg.215 CDS gi|227860942|gb|ACLI01000116.1| 57702 56446 -3 - 1257 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67457.peg.216 CDS gi|227860942|gb|ACLI01000116.1| 59139 57730 -3 - 1410 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67457.peg.217 CDS gi|227860942|gb|ACLI01000116.1| 60169 59141 -1 - 1029 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67457.peg.218 CDS gi|227860942|gb|ACLI01000116.1| 60823 60188 -1 - 636 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67457.peg.219 CDS gi|227860942|gb|ACLI01000116.1| 62400 60820 -3 - 1581 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67457.peg.220 CDS gi|227860942|gb|ACLI01000116.1| 62835 63242 3 + 408 hypothetical protein - none -
fig|6666666.67457.peg.221 CDS gi|227860942|gb|ACLI01000116.1| 64633 63371 -1 - 1263 Putative integral membrane protein - none -
fig|6666666.67457.peg.222 CDS gi|227860943|gb|ACLI01000115.1| 3173 354 -2 - 2820 probable secreted protein. - none -
fig|6666666.67457.peg.223 CDS gi|227860943|gb|ACLI01000115.1| 4132 3170 -1 - 963 MutT/nudix family protein - none -
fig|6666666.67457.peg.224 CDS gi|227860943|gb|ACLI01000115.1| 4255 5724 1 + 1470 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67457.peg.225 CDS gi|227860943|gb|ACLI01000115.1| 5717 6322 2 + 606 Putative transcriptional regulator - none -
fig|6666666.67457.peg.226 CDS gi|227860943|gb|ACLI01000115.1| 6362 7078 2 + 717 Branched-chain amino acid transport protein azlC - none -
fig|6666666.67457.peg.227 CDS gi|227860943|gb|ACLI01000115.1| 7071 7421 3 + 351 hypothetical membrane protein - none -
fig|6666666.67457.peg.228 CDS gi|227860943|gb|ACLI01000115.1| 9158 7443 -2 - 1716 non-ribosomal peptide synthetase modules and related proteins - none -
fig|6666666.67457.peg.229 CDS gi|227860943|gb|ACLI01000115.1| 9233 10024 2 + 792 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.230 CDS gi|227860943|gb|ACLI01000115.1| 10988 10461 -2 - 528 hypothetical protein - none -
fig|6666666.67457.peg.231 CDS gi|227860943|gb|ACLI01000115.1| 10989 11681 3 + 693 hypothetical protein - none -
fig|6666666.67457.peg.232 CDS gi|227860943|gb|ACLI01000115.1| 12015 11689 -3 - 327 FIG00548982: hypothetical protein - none -
fig|6666666.67457.peg.233 CDS gi|227860943|gb|ACLI01000115.1| 12113 12913 2 + 801 Phosphomethylpyrimidine kinase (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67457.peg.234 CDS gi|227860944|gb|ACLI01000114.1| 2190 1102 -3 - 1089 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.67457.peg.235 CDS gi|227860944|gb|ACLI01000114.1| 2711 2388 -2 - 324 Thioredoxin - none -
fig|6666666.67457.peg.236 CDS gi|227860944|gb|ACLI01000114.1| 3883 2942 -1 - 942 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.67457.peg.237 CDS gi|227860944|gb|ACLI01000114.1| 3857 3979 2 + 123 hypothetical protein - none -
fig|6666666.67457.peg.238 CDS gi|227860944|gb|ACLI01000114.1| 4752 4087 -3 - 666 putative RNA polymerase sigma factor - none -
fig|6666666.67457.peg.239 CDS gi|227860944|gb|ACLI01000114.1| 8469 5128 -3 - 3342 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67457.peg.240 CDS gi|227860945|gb|ACLI01000113.1| 51 896 3 + 846 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67457.peg.241 CDS gi|227860945|gb|ACLI01000113.1| 930 1598 3 + 669 FIG007808: hypothetical protein - none -
fig|6666666.67457.peg.242 CDS gi|227860945|gb|ACLI01000113.1| 2111 1623 -2 - 489 hypothetical protein - none -
fig|6666666.67457.peg.243 CDS gi|227860946|gb|ACLI01000112.1| 2 637 2 + 636 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67457.peg.244 CDS gi|227860946|gb|ACLI01000112.1| 634 2616 1 + 1983 Serine/threonine-protein kinase PknB (EC 2.7.11.1) - none -
fig|6666666.67457.peg.245 CDS gi|227860946|gb|ACLI01000112.1| 2842 3114 1 + 273 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67457.peg.246 CDS gi|227860946|gb|ACLI01000112.1| 4817 4161 -2 - 657 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.67457.peg.247 CDS gi|227860946|gb|ACLI01000112.1| 5462 4929 -2 - 534 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.248 CDS gi|227860946|gb|ACLI01000112.1| 5541 6395 3 + 855 FIG00547773: hypothetical protein - none -
fig|6666666.67457.peg.249 CDS gi|227860946|gb|ACLI01000112.1| 6977 6483 -2 - 495 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.250 CDS gi|227860946|gb|ACLI01000112.1| 7196 8317 2 + 1122 Putative nitrile hydratase regulator clustered with urea transport - none -
fig|6666666.67457.peg.251 CDS gi|227860946|gb|ACLI01000112.1| 9463 8306 -1 - 1158 arsenical pump membrane protein - none -
fig|6666666.67457.peg.252 CDS gi|227860946|gb|ACLI01000112.1| 10108 9470 -1 - 639 Urea channel UreI Urea decomposition;
Urease subunits
fig|6666666.67457.peg.253 CDS gi|227860946|gb|ACLI01000112.1| 11649 10225 -3 - 1425 Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein - none -
fig|6666666.67457.peg.254 CDS gi|227860946|gb|ACLI01000112.1| 11824 11642 -1 - 183 hypothetical protein - none -
fig|6666666.67457.peg.255 CDS gi|227860946|gb|ACLI01000112.1| 12889 12128 -1 - 762 putative sugar ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.256 CDS gi|227860946|gb|ACLI01000112.1| 13926 12886 -3 - 1041 putative ABC transporter permease protein - none -
fig|6666666.67457.peg.257 CDS gi|227860946|gb|ACLI01000112.1| 14891 13923 -2 - 969 putative lipoprotein - none -
fig|6666666.67457.peg.258 CDS gi|227860946|gb|ACLI01000112.1| 16036 15014 -1 - 1023 putative transcription regulator - none -
fig|6666666.67457.peg.259 CDS gi|227860946|gb|ACLI01000112.1| 16043 16192 2 + 150 hypothetical protein - none -
fig|6666666.67457.peg.260 CDS gi|227860946|gb|ACLI01000112.1| 16499 18154 2 + 1656 putative ABC transporter permease protein - none -
fig|6666666.67457.peg.261 CDS gi|227860946|gb|ACLI01000112.1| 18847 18503 -1 - 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67457.peg.262 CDS gi|227860946|gb|ACLI01000112.1| 21442 18851 -1 - 2592 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67457.peg.263 CDS gi|227860946|gb|ACLI01000112.1| 21569 21778 2 + 210 Prevent host death protein, Phd antitoxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67457.peg.264 CDS gi|227860946|gb|ACLI01000112.1| 21775 22038 1 + 264 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67457.peg.265 CDS gi|227860946|gb|ACLI01000112.1| 22256 22705 2 + 450 FIG00544172: hypothetical protein - none -
fig|6666666.67457.peg.266 CDS gi|227860946|gb|ACLI01000112.1| 22709 23371 2 + 663 FIG00544786: hypothetical protein - none -
fig|6666666.67457.peg.267 CDS gi|227860946|gb|ACLI01000112.1| 25257 23368 -3 - 1890 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67457.peg.268 CDS gi|227860946|gb|ACLI01000112.1| 25682 25317 -2 - 366 Transcriptional regulator, ArsR family - none -
fig|6666666.67457.peg.269 CDS gi|227860946|gb|ACLI01000112.1| 25972 25838 -1 - 135 hypothetical protein - none -
fig|6666666.67457.peg.270 CDS gi|227860946|gb|ACLI01000112.1| 26551 26030 -1 - 522 hypothetical protein - none -
fig|6666666.67457.peg.271 CDS gi|227860946|gb|ACLI01000112.1| 27794 26892 -2 - 903 FIG00544157: hypothetical protein - none -
fig|6666666.67457.peg.272 CDS gi|227860946|gb|ACLI01000112.1| 29953 27890 -1 - 2064 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67457.peg.273 CDS gi|227860946|gb|ACLI01000112.1| 30668 30087 -2 - 582 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67457.peg.274 CDS gi|227860946|gb|ACLI01000112.1| 31861 30665 -1 - 1197 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67457.peg.275 CDS gi|227860946|gb|ACLI01000112.1| 33147 31963 -3 - 1185 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67457.peg.276 CDS gi|227860946|gb|ACLI01000112.1| 35738 34017 -2 - 1722 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67457.peg.277 CDS gi|227860946|gb|ACLI01000112.1| 36249 36124 -3 - 126 hypothetical protein - none -
fig|6666666.67457.peg.278 CDS gi|227860946|gb|ACLI01000112.1| 36627 36770 3 + 144 LSU ribosomal protein L34p RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.67457.peg.279 CDS gi|227860946|gb|ACLI01000112.1| 36886 37200 1 + 315 Ribonuclease P protein component (EC 3.1.26.5) RNA modification cluster;
tRNA processing
fig|6666666.67457.peg.280 CDS gi|227860946|gb|ACLI01000112.1| 37355 37480 2 + 126 Protein YidD RNA modification cluster
fig|6666666.67457.peg.281 CDS gi|227860946|gb|ACLI01000112.1| 37569 38519 3 + 951 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
RNA modification cluster
fig|6666666.67457.peg.282 CDS gi|227860946|gb|ACLI01000112.1| 38651 39280 2 + 630 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67457.peg.283 CDS gi|227860946|gb|ACLI01000112.1| 39397 40329 1 + 933 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67457.peg.284 CDS gi|227860947|gb|ACLI01000111.1| 804 1700 3 + 897 FIG00543872: hypothetical protein - none -
fig|6666666.67457.peg.285 CDS gi|227860947|gb|ACLI01000111.1| 1716 2177 3 + 462 FIG00818182: hypothetical protein - none -
fig|6666666.67457.peg.286 CDS gi|227860947|gb|ACLI01000111.1| 2177 3493 2 + 1317 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67457.peg.287 CDS gi|227860947|gb|ACLI01000111.1| 3499 4848 1 + 1350 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67457.peg.288 CDS gi|227860947|gb|ACLI01000111.1| 4845 6272 3 + 1428 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.289 CDS gi|227860948|gb|ACLI01000110.1| 378 199 -3 - 180 Mobile element protein - none -
fig|6666666.67457.peg.290 CDS gi|227860948|gb|ACLI01000110.1| 3815 621 -2 - 3195 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.291 CDS gi|227860948|gb|ACLI01000110.1| 5065 3812 -1 - 1254 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.292 CDS gi|227860948|gb|ACLI01000110.1| 7026 5062 -3 - 1965 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.293 CDS gi|227860948|gb|ACLI01000110.1| 9077 7263 -2 - 1815 hypothetical protein - none -
fig|6666666.67457.peg.294 CDS gi|227860948|gb|ACLI01000110.1| 9559 9077 -1 - 483 conserved hypothetical protein - none -
fig|6666666.67457.peg.295 CDS gi|227860948|gb|ACLI01000110.1| 10386 9934 -3 - 453 Mobile element protein - none -
fig|6666666.67457.peg.296 CDS gi|227860948|gb|ACLI01000110.1| 10597 10812 1 + 216 hypothetical protein - none -
fig|6666666.67457.peg.297 CDS gi|227860949|gb|ACLI01000109.1| 88 285 1 + 198 hypothetical protein - none -
fig|6666666.67457.peg.298 CDS gi|227860949|gb|ACLI01000109.1| 567 292 -3 - 276 FIG00545382: hypothetical protein - none -
fig|6666666.67457.peg.299 CDS gi|227860949|gb|ACLI01000109.1| 1571 567 -2 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.67457.peg.300 CDS gi|227860949|gb|ACLI01000109.1| 2006 1680 -2 - 327 FIG00545336: hypothetical protein - none -
fig|6666666.67457.peg.301 CDS gi|227860949|gb|ACLI01000109.1| 2297 3661 2 + 1365 hypothetical protein - none -
fig|6666666.67457.peg.302 CDS gi|227860949|gb|ACLI01000109.1| 3731 3958 2 + 228 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.303 CDS gi|227860949|gb|ACLI01000109.1| 4043 4219 2 + 177 hypothetical protein - none -
fig|6666666.67457.peg.304 CDS gi|227860949|gb|ACLI01000109.1| 4284 4646 3 + 363 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.305 CDS gi|227860949|gb|ACLI01000109.1| 5284 4640 -1 - 645 hypothetical protein - none -
fig|6666666.67457.peg.306 CDS gi|227860949|gb|ACLI01000109.1| 6643 5348 -1 - 1296 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.67457.peg.307 CDS gi|227860949|gb|ACLI01000109.1| 7204 7932 1 + 729 Riboflavin transporter PnuX Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.67457.peg.308 CDS gi|227860949|gb|ACLI01000109.1| 9283 7985 -1 - 1299 chloride channel EriC-like protein - none -
fig|6666666.67457.peg.309 CDS gi|227860949|gb|ACLI01000109.1| 9275 9397 2 + 123 hypothetical protein - none -
fig|6666666.67457.peg.310 CDS gi|227860949|gb|ACLI01000109.1| 9522 10985 3 + 1464 putative aldehyde dehydrogenase - none -
fig|6666666.67457.peg.311 CDS gi|227860949|gb|ACLI01000109.1| 11044 12162 1 + 1119 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.67457.peg.312 CDS gi|227860949|gb|ACLI01000109.1| 14101 12233 -1 - 1869 Heavy-Metal transporting ATPase - none -
fig|6666666.67457.peg.313 CDS gi|227860949|gb|ACLI01000109.1| 14509 14273 -1 - 237 Copper chaperone Copper homeostasis
fig|6666666.67457.peg.314 CDS gi|227860949|gb|ACLI01000109.1| 14691 14557 -3 - 135 hypothetical protein - none -
fig|6666666.67457.peg.315 CDS gi|227860949|gb|ACLI01000109.1| 14680 16053 1 + 1374 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67457.peg.316 CDS gi|227860949|gb|ACLI01000109.1| 16283 18415 2 + 2133 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67457.peg.317 CDS gi|227860949|gb|ACLI01000109.1| 18631 19983 1 + 1353 hypothetical protein - none -
fig|6666666.67457.peg.318 CDS gi|227860949|gb|ACLI01000109.1| 19986 22580 3 + 2595 hypothetical protein - none -
fig|6666666.67457.peg.319 CDS gi|227860949|gb|ACLI01000109.1| 23579 22584 -2 - 996 hypothetical protein - none -
fig|6666666.67457.peg.320 CDS gi|227860949|gb|ACLI01000109.1| 23861 23652 -2 - 210 hypothetical protein - none -
fig|6666666.67457.peg.321 CDS gi|227860949|gb|ACLI01000109.1| 24190 25230 1 + 1041 integral membrane protein - none -
fig|6666666.67457.peg.322 CDS gi|227860949|gb|ACLI01000109.1| 25293 26060 3 + 768 hypothetical protein - none -
fig|6666666.67457.peg.323 CDS gi|227860949|gb|ACLI01000109.1| 27372 26095 -3 - 1278 hypothetical protein - none -
fig|6666666.67457.peg.324 CDS gi|227860949|gb|ACLI01000109.1| 27504 27382 -3 - 123 hypothetical protein - none -
fig|6666666.67457.peg.325 CDS gi|227860949|gb|ACLI01000109.1| 28099 27575 -1 - 525 hypothetical membrane protein - none -
fig|6666666.67457.peg.326 CDS gi|227860949|gb|ACLI01000109.1| 28862 28236 -2 - 627 Secreted and surface protein containing fasciclin-like repeats - none -
fig|6666666.67457.peg.327 CDS gi|227860949|gb|ACLI01000109.1| 29236 30165 1 + 930 putative transcription regulator - none -
fig|6666666.67457.peg.328 CDS gi|227860949|gb|ACLI01000109.1| 31283 30195 -2 - 1089 2-keto-3-deoxygluconate permease (KDG permease) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.329 CDS gi|227860949|gb|ACLI01000109.1| 33258 31636 -3 - 1623 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.67457.peg.330 CDS gi|227860949|gb|ACLI01000109.1| 33976 33551 -1 - 426 hypothetical protein - none -
fig|6666666.67457.peg.331 CDS gi|227860949|gb|ACLI01000109.1| 34370 34113 -2 - 258 hypothetical protein - none -
fig|6666666.67457.peg.332 CDS gi|227860949|gb|ACLI01000109.1| 34519 35118 1 + 600 FIG00546770: hypothetical protein - none -
fig|6666666.67457.peg.333 CDS gi|227860949|gb|ACLI01000109.1| 35181 35477 3 + 297 rhodanese-related sulfurtransferase - none -
fig|6666666.67457.peg.334 CDS gi|227860949|gb|ACLI01000109.1| 36660 35638 -3 - 1023 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.335 CDS gi|227860950|gb|ACLI01000108.1| 838 2499 1 + 1662 hypothetical protein - none -
fig|6666666.67457.peg.336 CDS gi|227860950|gb|ACLI01000108.1| 3742 4353 1 + 612 hypothetical protein - none -
fig|6666666.67457.peg.337 CDS gi|227860950|gb|ACLI01000108.1| 5864 4449 -2 - 1416 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.67457.peg.338 CDS gi|227860950|gb|ACLI01000108.1| 7376 5955 -2 - 1422 hypothetical protein - none -
fig|6666666.67457.peg.339 CDS gi|227860950|gb|ACLI01000108.1| 7442 8653 2 + 1212 FIG00543985: hypothetical protein - none -
fig|6666666.67457.peg.340 CDS gi|227860950|gb|ACLI01000108.1| 8741 9586 2 + 846 hypothetical protein - none -
fig|6666666.67457.peg.341 CDS gi|227860950|gb|ACLI01000108.1| 10165 9659 -1 - 507 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.342 CDS gi|227860950|gb|ACLI01000108.1| 10340 11242 2 + 903 FIG00547661: hypothetical protein - none -
fig|6666666.67457.peg.343 CDS gi|227860950|gb|ACLI01000108.1| 11253 12260 3 + 1008 FIG00543870: hypothetical protein - none -
fig|6666666.67457.peg.344 CDS gi|227860950|gb|ACLI01000108.1| 13242 12265 -3 - 978 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67457.peg.345 CDS gi|227860950|gb|ACLI01000108.1| 13273 13857 1 + 585 FIG00543933: hypothetical protein - none -
fig|6666666.67457.peg.346 CDS gi|227860951|gb|ACLI01000107.1| 796 470 -1 - 327 hypothetical membrane protein - none -
fig|6666666.67457.peg.347 CDS gi|227860951|gb|ACLI01000107.1| 1191 796 -3 - 396 FIG00544824: hypothetical protein - none -
fig|6666666.67457.peg.348 CDS gi|227860951|gb|ACLI01000107.1| 2664 1282 -3 - 1383 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67457.peg.349 CDS gi|227860951|gb|ACLI01000107.1| 4383 2692 -3 - 1692 FIG00544709: hypothetical protein - none -
fig|6666666.67457.peg.350 CDS gi|227860951|gb|ACLI01000107.1| 4616 5542 2 + 927 hypothetical protein - none -
fig|6666666.67457.peg.351 CDS gi|227860951|gb|ACLI01000107.1| 5602 6507 1 + 906 hypothetical protein - none -
fig|6666666.67457.peg.352 CDS gi|227860952|gb|ACLI01000106.1| 22 156 1 + 135 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67457.peg.353 CDS gi|227860952|gb|ACLI01000106.1| 153 1220 3 + 1068 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67457.peg.354 CDS gi|227860952|gb|ACLI01000106.1| 2122 1217 -1 - 906 FIG00546315: hypothetical protein - none -
fig|6666666.67457.peg.355 CDS gi|227860952|gb|ACLI01000106.1| 2719 2432 -1 - 288 Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) - none -
fig|6666666.67457.peg.356 CDS gi|227860952|gb|ACLI01000106.1| 2956 3912 1 + 957 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67457.peg.357 CDS gi|227860952|gb|ACLI01000106.1| 5094 3919 -3 - 1176 selenocysteine lyase - none -
fig|6666666.67457.peg.358 CDS gi|227860952|gb|ACLI01000106.1| 5237 6133 2 + 897 O-antigen export system permease protein RfbD - none -
fig|6666666.67457.peg.359 CDS gi|227860952|gb|ACLI01000106.1| 6146 6964 2 + 819 O-antigen export system, ATP-binding protein - none -
fig|6666666.67457.peg.360 CDS gi|227860952|gb|ACLI01000106.1| 7460 8074 2 + 615 FIG00544501: hypothetical protein - none -
fig|6666666.67457.peg.361 CDS gi|227860952|gb|ACLI01000106.1| 8096 9028 2 + 933 Putative glycosyl transferase - none -
fig|6666666.67457.peg.362 CDS gi|227860952|gb|ACLI01000106.1| 9672 9037 -3 - 636 Uncharacterized protein conserved in bacteria - none -
fig|6666666.67457.peg.363 CDS gi|227860952|gb|ACLI01000106.1| 10076 9669 -2 - 408 FIG00544862: hypothetical protein - none -
fig|6666666.67457.peg.364 CDS gi|227860952|gb|ACLI01000106.1| 10566 10087 -3 - 480 FIG00544442: hypothetical protein - none -
fig|6666666.67457.peg.365 CDS gi|227860952|gb|ACLI01000106.1| 11520 10600 -3 - 921 FIG00545361: hypothetical protein - none -
fig|6666666.67457.peg.366 CDS gi|227860952|gb|ACLI01000106.1| 12058 11567 -1 - 492 FIG00544473: hypothetical protein - none -
fig|6666666.67457.peg.367 CDS gi|227860952|gb|ACLI01000106.1| 12082 12309 1 + 228 FIG00543901: hypothetical protein - none -
fig|6666666.67457.peg.368 CDS gi|227860952|gb|ACLI01000106.1| 12378 13199 3 + 822 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67457.peg.369 CDS gi|227860952|gb|ACLI01000106.1| 13196 13894 2 + 699 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67457.peg.370 CDS gi|227860952|gb|ACLI01000106.1| 13894 14562 1 + 669 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67457.peg.371 CDS gi|227860952|gb|ACLI01000106.1| 14590 15501 1 + 912 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67457.peg.372 CDS gi|227860952|gb|ACLI01000106.1| 15619 17085 1 + 1467 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67457.peg.373 CDS gi|227860952|gb|ACLI01000106.1| 17106 17867 3 + 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67457.peg.374 CDS gi|227860952|gb|ACLI01000106.1| 17993 20104 2 + 2112 putative membrane protein - none -
fig|6666666.67457.peg.375 CDS gi|227860952|gb|ACLI01000106.1| 20181 23567 3 + 3387 putative arabinosyltransferase - none -
fig|6666666.67457.peg.376 CDS gi|227860952|gb|ACLI01000106.1| 23616 25187 3 + 1572 FIG00544621: hypothetical protein - none -
fig|6666666.67457.peg.377 CDS gi|227860952|gb|ACLI01000106.1| 26715 25189 -3 - 1527 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67457.peg.378 CDS gi|227860952|gb|ACLI01000106.1| 31211 26715 -2 - 4497 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67457.peg.379 CDS gi|227860952|gb|ACLI01000106.1| 31407 31841 3 + 435 PAS/PAC domain (EC 2.7.3.-) - none -
fig|6666666.67457.peg.380 CDS gi|227860952|gb|ACLI01000106.1| 32016 33044 3 + 1029 hypothetical protein - none -
fig|6666666.67457.peg.381 CDS gi|227860952|gb|ACLI01000106.1| 33041 33502 2 + 462 hypothetical protein - none -
fig|6666666.67457.peg.382 CDS gi|227860952|gb|ACLI01000106.1| 34517 33513 -2 - 1005 FIG00547725: hypothetical protein - none -
fig|6666666.67457.peg.383 CDS gi|227860952|gb|ACLI01000106.1| 35326 34514 -1 - 813 hypothetical protein - none -
fig|6666666.67457.peg.384 CDS gi|227860952|gb|ACLI01000106.1| 35831 37777 2 + 1947 putative endopeptidase - none -
fig|6666666.67457.peg.385 CDS gi|227860952|gb|ACLI01000106.1| 38490 37867 -3 - 624 No significant database matches - none -
fig|6666666.67457.peg.386 CDS gi|227860952|gb|ACLI01000106.1| 38676 39602 3 + 927 FIG00544069: hypothetical protein - none -
fig|6666666.67457.peg.387 CDS gi|227860952|gb|ACLI01000106.1| 40762 39599 -1 - 1164 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.388 CDS gi|227860952|gb|ACLI01000106.1| 41081 40731 -2 - 351 FIG00545554: hypothetical protein - none -
fig|6666666.67457.peg.389 CDS gi|227860952|gb|ACLI01000106.1| 41943 41086 -3 - 858 lactoylglutathione lyase-like protein - none -
fig|6666666.67457.peg.390 CDS gi|227860952|gb|ACLI01000106.1| 42233 41943 -2 - 291 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67457.peg.391 CDS gi|227860952|gb|ACLI01000106.1| 42972 42268 -3 - 705 L-lysine permease - none -
fig|6666666.67457.peg.392 CDS gi|227860952|gb|ACLI01000106.1| 43559 42969 -2 - 591 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67457.peg.393 CDS gi|227860952|gb|ACLI01000106.1| 44322 43630 -3 - 693 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67457.peg.394 CDS gi|227860952|gb|ACLI01000106.1| 44355 45020 3 + 666 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.395 CDS gi|227860952|gb|ACLI01000106.1| 45033 47468 3 + 2436 ATP-dependent helicase HrpB - none -
fig|6666666.67457.peg.396 CDS gi|227860952|gb|ACLI01000106.1| 47906 47538 -2 - 369 FIG00544309: hypothetical protein - none -
fig|6666666.67457.peg.397 CDS gi|227860952|gb|ACLI01000106.1| 48826 48044 -1 - 783 FIG00545045: hypothetical protein - none -
fig|6666666.67457.peg.398 CDS gi|227860952|gb|ACLI01000106.1| 49048 50172 1 + 1125 FIG00545643: hypothetical protein - none -
fig|6666666.67457.peg.399 CDS gi|227860952|gb|ACLI01000106.1| 51858 50251 -3 - 1608 FIG00545896: hypothetical protein - none -
fig|6666666.67457.peg.400 CDS gi|227860952|gb|ACLI01000106.1| 52030 52206 1 + 177 hypothetical protein - none -
fig|6666666.67457.peg.401 CDS gi|227860952|gb|ACLI01000106.1| 52243 52653 1 + 411 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67457.peg.402 CDS gi|227860952|gb|ACLI01000106.1| 52745 53488 2 + 744 hypothetical protein - none -
fig|6666666.67457.peg.403 CDS gi|227860952|gb|ACLI01000106.1| 53545 54777 1 + 1233 hypothetical protein - none -
fig|6666666.67457.peg.404 CDS gi|227860952|gb|ACLI01000106.1| 55867 55115 -1 - 753 FIG00545943: hypothetical protein - none -
fig|6666666.67457.peg.405 CDS gi|227860952|gb|ACLI01000106.1| 56982 55963 -3 - 1020 FIG00544031: hypothetical protein - none -
fig|6666666.67457.peg.406 CDS gi|227860952|gb|ACLI01000106.1| 58711 57083 -1 - 1629 FIG00547305: hypothetical protein - none -
fig|6666666.67457.peg.407 CDS gi|227860952|gb|ACLI01000106.1| 58704 58823 3 + 120 hypothetical protein - none -
fig|6666666.67457.peg.408 CDS gi|227860952|gb|ACLI01000106.1| 60294 58858 -3 - 1437 FIG00544905: hypothetical protein - none -
fig|6666666.67457.peg.409 CDS gi|227860952|gb|ACLI01000106.1| 61829 60291 -2 - 1539 FIG00545477: hypothetical protein - none -
fig|6666666.67457.peg.410 CDS gi|227860952|gb|ACLI01000106.1| 63916 61838 -1 - 2079 FIG00545158: hypothetical protein - none -
fig|6666666.67457.peg.411 CDS gi|227860952|gb|ACLI01000106.1| 66051 64090 -3 - 1962 hypothetical protein - none -
fig|6666666.67457.peg.412 CDS gi|227860952|gb|ACLI01000106.1| 66297 67313 3 + 1017 hypothetical protein - none -
fig|6666666.67457.peg.413 CDS gi|227860952|gb|ACLI01000106.1| 67387 68679 1 + 1293 permease of the major facilitator superfamily - none -
fig|6666666.67457.peg.414 CDS gi|227860952|gb|ACLI01000106.1| 68929 70032 1 + 1104 FIG00546074: hypothetical protein - none -
fig|6666666.67457.peg.415 CDS gi|227860952|gb|ACLI01000106.1| 70431 70144 -3 - 288 hypothetical protein - none -
fig|6666666.67457.peg.416 CDS gi|227860952|gb|ACLI01000106.1| 71240 70674 -2 - 567 carbonic anhydrase, family 3 - none -
fig|6666666.67457.peg.417 CDS gi|227860952|gb|ACLI01000106.1| 71821 71237 -1 - 585 FIG00546535: hypothetical protein - none -
fig|6666666.67457.peg.418 CDS gi|227860952|gb|ACLI01000106.1| 71983 72555 1 + 573 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.67457.peg.419 CDS gi|227860952|gb|ACLI01000106.1| 73838 72660 -2 - 1179 possible transcriptional regulator - none -
fig|6666666.67457.peg.420 CDS gi|227860952|gb|ACLI01000106.1| 73974 75185 3 + 1212 Salicylate hydroxylase (EC 1.14.13.1) Salicylate and gentisate catabolism;
Salicylate ester degradation
fig|6666666.67457.peg.421 CDS gi|227860952|gb|ACLI01000106.1| 75242 76072 2 + 831 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.67457.peg.422 CDS gi|227860952|gb|ACLI01000106.1| 76074 76937 3 + 864 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67457.peg.423 CDS gi|227860952|gb|ACLI01000106.1| 76962 78017 3 + 1056 conserved hypothetical protein - none -
fig|6666666.67457.peg.424 CDS gi|227860952|gb|ACLI01000106.1| 78059 78685 2 + 627 hypothetical protein - none -
fig|6666666.67457.peg.425 CDS gi|227860952|gb|ACLI01000106.1| 78751 79257 1 + 507 Phosphohistidine phosphatase SixA - none -
fig|6666666.67457.peg.426 CDS gi|227860952|gb|ACLI01000106.1| 80160 79258 -3 - 903 hypothetical protein - none -
fig|6666666.67457.peg.427 CDS gi|227860953|gb|ACLI01000105.1| 374 1327 2 + 954 hypothetical protein - none -
fig|6666666.67457.peg.428 CDS gi|227860953|gb|ACLI01000105.1| 1311 2798 3 + 1488 integral membrane transporter - none -
fig|6666666.67457.peg.429 CDS gi|227860953|gb|ACLI01000105.1| 2821 4041 1 + 1221 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67457.peg.430 CDS gi|227860953|gb|ACLI01000105.1| 4125 4550 3 + 426 hypothetical protein - none -
fig|6666666.67457.peg.431 CDS gi|227860953|gb|ACLI01000105.1| 4659 6071 3 + 1413 putative sensor kinase - none -
fig|6666666.67457.peg.432 CDS gi|227860953|gb|ACLI01000105.1| 6072 6746 3 + 675 two-component system, response regulator - none -
fig|6666666.67457.peg.433 CDS gi|227860953|gb|ACLI01000105.1| 8310 6790 -3 - 1521 FIG00544507: hypothetical protein - none -
fig|6666666.67457.peg.434 CDS gi|227860953|gb|ACLI01000105.1| 8825 8460 -2 - 366 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67457.peg.435 CDS gi|227860953|gb|ACLI01000105.1| 9079 8822 -1 - 258 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67457.peg.436 CDS gi|227860953|gb|ACLI01000105.1| 9441 9076 -3 - 366 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67457.peg.437 CDS gi|227860953|gb|ACLI01000105.1| 11081 9438 -2 - 1644 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67457.peg.438 CDS gi|227860953|gb|ACLI01000105.1| 11536 11081 -1 - 456 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67457.peg.439 CDS gi|227860953|gb|ACLI01000105.1| 14193 11533 -3 - 2661 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67457.peg.440 CDS gi|227860953|gb|ACLI01000105.1| 14891 15181 2 + 291 hypothetical protein - none -
fig|6666666.67457.peg.441 CDS gi|227860953|gb|ACLI01000105.1| 16913 15312 -2 - 1602 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67457.peg.442 CDS gi|227860953|gb|ACLI01000105.1| 17172 17732 3 + 561 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.67457.peg.443 CDS gi|227860953|gb|ACLI01000105.1| 17746 18747 1 + 1002 hypothetical protein - none -
fig|6666666.67457.peg.444 CDS gi|227860953|gb|ACLI01000105.1| 19832 18798 -2 - 1035 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67457.peg.445 CDS gi|227860953|gb|ACLI01000105.1| 21196 19931 -1 - 1266 Aspartokinase (EC 2.7.2.4) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67457.peg.446 CDS gi|227860953|gb|ACLI01000105.1| 21426 22247 3 + 822 FIG00544278: hypothetical protein - none -
fig|6666666.67457.peg.447 CDS gi|227860953|gb|ACLI01000105.1| 22521 22366 -3 - 156 hypothetical protein - none -
fig|6666666.67457.peg.448 CDS gi|227860953|gb|ACLI01000105.1| 26836 22610 -1 - 4227 hypothetical protein - none -
fig|6666666.67457.peg.449 CDS gi|227860953|gb|ACLI01000105.1| 27550 27221 -1 - 330 hypothetical protein - none -
fig|6666666.67457.peg.450 CDS gi|227860953|gb|ACLI01000105.1| 27569 29419 2 + 1851 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67457.peg.451 CDS gi|227860953|gb|ACLI01000105.1| 32813 29520 -2 - 3294 hypothetical protein - none -
fig|6666666.67457.peg.452 CDS gi|227860953|gb|ACLI01000105.1| 33529 34680 1 + 1152 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.67457.peg.453 CDS gi|227860953|gb|ACLI01000105.1| 34750 36021 1 + 1272 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67457.peg.454 CDS gi|227860953|gb|ACLI01000105.1| 36021 36773 3 + 753 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67457.peg.455 CDS gi|227860953|gb|ACLI01000105.1| 37856 37200 -2 - 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67457.peg.456 CDS gi|227860953|gb|ACLI01000105.1| 38291 37968 -2 - 324 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67457.peg.457 CDS gi|227860953|gb|ACLI01000105.1| 40688 38388 -2 - 2301 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67457.peg.458 CDS gi|227860953|gb|ACLI01000105.1| 41455 40790 -1 - 666 FIG00544659: hypothetical protein - none -
fig|6666666.67457.peg.459 CDS gi|227860953|gb|ACLI01000105.1| 42736 41456 -1 - 1281 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67457.peg.460 CDS gi|227860953|gb|ACLI01000105.1| 42755 42895 2 + 141 hypothetical protein - none -
fig|6666666.67457.peg.461 CDS gi|227860953|gb|ACLI01000105.1| 43397 44218 2 + 822 putative oxidoreductase - none -
fig|6666666.67457.peg.462 CDS gi|227860953|gb|ACLI01000105.1| 44224 45126 1 + 903 GCN5-related N-acetyltransferase - none -
fig|6666666.67457.peg.463 CDS gi|227860953|gb|ACLI01000105.1| 46482 45145 -3 - 1338 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.67457.peg.464 CDS gi|227860953|gb|ACLI01000105.1| 47399 46479 -2 - 921 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.465 CDS gi|227860953|gb|ACLI01000105.1| 47500 48225 1 + 726 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.466 CDS gi|227860953|gb|ACLI01000105.1| 49953 48688 -3 - 1266 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.467 CDS gi|227860953|gb|ACLI01000105.1| 52373 49965 -2 - 2409 putative membrane protein - none -
fig|6666666.67457.peg.468 CDS gi|227860953|gb|ACLI01000105.1| 52585 52433 -1 - 153 hypothetical protein - none -
fig|6666666.67457.peg.469 CDS gi|227860953|gb|ACLI01000105.1| 52684 53304 1 + 621 hypothetical protein - none -
fig|6666666.67457.peg.470 CDS gi|227860953|gb|ACLI01000105.1| 53730 53497 -3 - 234 FIG00546156: hypothetical protein - none -
fig|6666666.67457.peg.471 CDS gi|227860953|gb|ACLI01000105.1| 54315 53836 -3 - 480 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67457.peg.472 CDS gi|227860953|gb|ACLI01000105.1| 54800 54315 -2 - 486 FIG00544249: hypothetical protein - none -
fig|6666666.67457.peg.473 CDS gi|227860953|gb|ACLI01000105.1| 54838 55860 1 + 1023 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67457.peg.474 CDS gi|227860953|gb|ACLI01000105.1| 57812 56202 -2 - 1611 di- and tricarboxylate transporter - none -
fig|6666666.67457.peg.475 CDS gi|227860953|gb|ACLI01000105.1| 58520 59548 2 + 1029 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67457.peg.476 CDS gi|227860953|gb|ACLI01000105.1| 59541 59960 3 + 420 FIG00547683: hypothetical protein - none -
fig|6666666.67457.peg.477 CDS gi|227860953|gb|ACLI01000105.1| 59968 60888 1 + 921 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67457.peg.478 CDS gi|227860953|gb|ACLI01000105.1| 61142 60885 -2 - 258 FIG00547695: hypothetical protein - none -
fig|6666666.67457.peg.479 CDS gi|227860953|gb|ACLI01000105.1| 61210 62007 1 + 798 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67457.peg.480 CDS gi|227860953|gb|ACLI01000105.1| 62021 62830 2 + 810 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67457.peg.481 CDS gi|227860953|gb|ACLI01000105.1| 62841 64028 3 + 1188 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67457.peg.482 CDS gi|227860953|gb|ACLI01000105.1| 64039 64506 1 + 468 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67457.peg.483 CDS gi|227860953|gb|ACLI01000105.1| 64503 64982 3 + 480 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67457.peg.484 CDS gi|227860954|gb|ACLI01000104.1| 2513 1320 -2 - 1194 hypothetical protein - none -
fig|6666666.67457.peg.485 CDS gi|227860955|gb|ACLI01000103.1| 437 321 -2 - 117 hypothetical protein - none -
fig|6666666.67457.peg.486 CDS gi|227860956|gb|ACLI01000102.1| 359 1510 2 + 1152 Mobile element protein - none -
fig|6666666.67457.peg.487 CDS gi|227860957|gb|ACLI01000101.1| 613 5103 1 + 4491 hypothetical protein - none -
fig|6666666.67457.peg.488 CDS gi|227860957|gb|ACLI01000101.1| 6210 5767 -3 - 444 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.489 CDS gi|227860957|gb|ACLI01000101.1| 6527 6222 -2 - 306 hypothetical protein - none -
fig|6666666.67457.peg.490 CDS gi|227860957|gb|ACLI01000101.1| 7532 6579 -2 - 954 D-beta-hydroxybutyrate permease Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.491 CDS gi|227860957|gb|ACLI01000101.1| 7993 7529 -1 - 465 D-beta-hydroxybutyrate permease Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.492 CDS gi|227860957|gb|ACLI01000101.1| 8586 9167 3 + 582 FIG00544635: hypothetical protein - none -
fig|6666666.67457.peg.493 CDS gi|227860957|gb|ACLI01000101.1| 9560 10015 2 + 456 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67457.peg.494 CDS gi|227860957|gb|ACLI01000101.1| 10125 10502 3 + 378 FIG00543835: hypothetical protein - none -
fig|6666666.67457.peg.495 CDS gi|227860957|gb|ACLI01000101.1| 11226 10603 -3 - 624 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67457.peg.496 CDS gi|227860957|gb|ACLI01000101.1| 11965 11228 -1 - 738 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67457.peg.497 CDS gi|227860957|gb|ACLI01000101.1| 12791 12024 -2 - 768 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67457.peg.498 CDS gi|227860957|gb|ACLI01000101.1| 13676 12855 -2 - 822 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.499 CDS gi|227860957|gb|ACLI01000101.1| 13812 14447 3 + 636 hypothetical protein - none -
fig|6666666.67457.peg.500 CDS gi|227860957|gb|ACLI01000101.1| 14966 14466 -2 - 501 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.501 CDS gi|227860957|gb|ACLI01000101.1| 15813 15052 -3 - 762 FIG00545125: hypothetical protein - none -
fig|6666666.67457.peg.502 CDS gi|227860957|gb|ACLI01000101.1| 16745 15810 -2 - 936 possible hydrolase - none -
fig|6666666.67457.peg.503 CDS gi|227860957|gb|ACLI01000101.1| 17277 16765 -3 - 513 Transcriptional regulatory protein - none -
fig|6666666.67457.peg.504 CDS gi|227860957|gb|ACLI01000101.1| 17843 17319 -2 - 525 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67457.peg.505 CDS gi|227860957|gb|ACLI01000101.1| 17939 18475 2 + 537 FIG00545098: hypothetical protein - none -
fig|6666666.67457.peg.506 CDS gi|227860957|gb|ACLI01000101.1| 18497 19834 2 + 1338 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67457.peg.507 CDS gi|227860957|gb|ACLI01000101.1| 20778 19831 -3 - 948 hypothetical protein - none -
fig|6666666.67457.peg.508 CDS gi|227860957|gb|ACLI01000101.1| 20950 22188 1 + 1239 putative integral membrane protein - none -
fig|6666666.67457.peg.509 CDS gi|227860957|gb|ACLI01000101.1| 22229 24244 2 + 2016 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67457.peg.510 CDS gi|227860957|gb|ACLI01000101.1| 24969 24241 -3 - 729 FIG00546117: hypothetical protein - none -
fig|6666666.67457.peg.511 CDS gi|227860957|gb|ACLI01000101.1| 26275 24977 -1 - 1299 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.512 CDS gi|227860957|gb|ACLI01000101.1| 28009 26363 -1 - 1647 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67457.peg.513 CDS gi|227860957|gb|ACLI01000101.1| 29770 28766 -1 - 1005 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67457.peg.514 CDS gi|227860957|gb|ACLI01000101.1| 29741 29869 2 + 129 hypothetical protein - none -
fig|6666666.67457.peg.515 CDS gi|227860957|gb|ACLI01000101.1| 30307 30765 1 + 459 Putative bacterioferritin - none -
fig|6666666.67457.peg.516 CDS gi|227860957|gb|ACLI01000101.1| 31002 31736 3 + 735 Transcriptional regulator, GntR family - none -
fig|6666666.67457.peg.517 CDS gi|227860957|gb|ACLI01000101.1| 33905 31800 -2 - 2106 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67457.peg.518 CDS gi|227860957|gb|ACLI01000101.1| 34508 34050 -2 - 459 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67457.peg.519 CDS gi|227860957|gb|ACLI01000101.1| 34961 34728 -2 - 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67457.peg.520 CDS gi|227860957|gb|ACLI01000101.1| 35602 35480 -1 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67457.peg.521 CDS gi|227860957|gb|ACLI01000101.1| 35882 36634 2 + 753 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67457.peg.522 CDS gi|227860957|gb|ACLI01000101.1| 37391 36642 -2 - 750 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.67457.peg.523 CDS gi|227860957|gb|ACLI01000101.1| 37820 37398 -2 - 423 FIG00543983: hypothetical protein - none -
fig|6666666.67457.peg.524 CDS gi|227860957|gb|ACLI01000101.1| 38977 37925 -1 - 1053 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.525 CDS gi|227860957|gb|ACLI01000101.1| 40237 39500 -1 - 738 FIG00544592: hypothetical protein - none -
fig|6666666.67457.peg.526 CDS gi|227860957|gb|ACLI01000101.1| 40220 40372 2 + 153 hypothetical protein - none -
fig|6666666.67457.peg.527 CDS gi|227860957|gb|ACLI01000101.1| 42090 40426 -3 - 1665 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.67457.peg.528 CDS gi|227860957|gb|ACLI01000101.1| 42221 42535 2 + 315 camphor resistance protein CrcB - none -
fig|6666666.67457.peg.529 CDS gi|227860957|gb|ACLI01000101.1| 42532 42867 1 + 336 hypothetical membrane protein - none -
fig|6666666.67457.peg.530 CDS gi|227860957|gb|ACLI01000101.1| 43586 42864 -2 - 723 hypothetical membrane protein - none -
fig|6666666.67457.peg.531 CDS gi|227860957|gb|ACLI01000101.1| 46252 43688 -1 - 2565 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.532 CDS gi|227860957|gb|ACLI01000101.1| 47076 46252 -3 - 825 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.533 CDS gi|227860957|gb|ACLI01000101.1| 47399 49102 2 + 1704 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67457.peg.534 CDS gi|227860959|gb|ACLI01000099.1| 20 1288 2 + 1269 hypothetical protein - none -
fig|6666666.67457.peg.535 CDS gi|227860959|gb|ACLI01000099.1| 2064 1435 -3 - 630 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.536 CDS gi|227860959|gb|ACLI01000099.1| 2837 2085 -2 - 753 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.537 CDS gi|227860959|gb|ACLI01000099.1| 2900 3667 2 + 768 Pca regulon regulatory protein PcaR Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.538 CDS gi|227860959|gb|ACLI01000099.1| 3725 4945 2 + 1221 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) - none -
fig|6666666.67457.peg.539 CDS gi|227860959|gb|ACLI01000099.1| 4948 5706 1 + 759 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.540 CDS gi|227860959|gb|ACLI01000099.1| 5739 7934 3 + 2196 DNA-binding HTH domain-containing protein - none -
fig|6666666.67457.peg.541 CDS gi|227860959|gb|ACLI01000099.1| 8461 8063 -1 - 399 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.542 CDS gi|227860959|gb|ACLI01000099.1| 9571 8465 -1 - 1107 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.543 CDS gi|227860959|gb|ACLI01000099.1| 10223 9609 -2 - 615 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.544 CDS gi|227860959|gb|ACLI01000099.1| 10952 10260 -2 - 693 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.545 CDS gi|227860959|gb|ACLI01000099.1| 11477 11184 -2 - 294 Muconolactone isomerase (EC 5.3.3.4) Catechol branch of beta-ketoadipate pathway
fig|6666666.67457.peg.546 CDS gi|227860959|gb|ACLI01000099.1| 12608 11487 -2 - 1122 Muconate cycloisomerase (EC 5.5.1.1) Catechol branch of beta-ketoadipate pathway;
Muconate lactonizing enzyme family
fig|6666666.67457.peg.547 CDS gi|227860959|gb|ACLI01000099.1| 13546 12686 -1 - 861 Catechol 1,2-dioxygenase (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.67457.peg.548 CDS gi|227860959|gb|ACLI01000099.1| 14027 15523 2 + 1497 Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.67457.peg.549 CDS gi|227860959|gb|ACLI01000099.1| 15594 16100 3 + 507 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.67457.peg.550 CDS gi|227860959|gb|ACLI01000099.1| 16111 17676 1 + 1566 benzoate dioxygenase, ferredoxin reductase component - none -
fig|6666666.67457.peg.551 CDS gi|227860959|gb|ACLI01000099.1| 17673 18503 3 + 831 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) Benzoate degradation
fig|6666666.67457.peg.552 CDS gi|227860959|gb|ACLI01000099.1| 18565 21240 1 + 2676 probable transcriptional regulator - none -
fig|6666666.67457.peg.553 CDS gi|227860959|gb|ACLI01000099.1| 21524 22936 2 + 1413 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.67457.peg.554 CDS gi|227860959|gb|ACLI01000099.1| 23849 23223 -2 - 627 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67457.peg.555 CDS gi|227860959|gb|ACLI01000099.1| 24479 23880 -2 - 600 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67457.peg.556 CDS gi|227860959|gb|ACLI01000099.1| 26031 24667 -3 - 1365 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67457.peg.557 CDS gi|227860959|gb|ACLI01000099.1| 27846 28625 3 + 780 FIG00997919: hypothetical protein - none -
fig|6666666.67457.peg.558 CDS gi|227860959|gb|ACLI01000099.1| 29233 28760 -1 - 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase Pentose phosphate pathway
fig|6666666.67457.peg.559 CDS gi|227860959|gb|ACLI01000099.1| 29902 29282 -1 - 621 FIG00544229: hypothetical protein - none -
fig|6666666.67457.peg.560 CDS gi|227860959|gb|ACLI01000099.1| 30072 32672 3 + 2601 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67457.peg.561 CDS gi|227860959|gb|ACLI01000099.1| 32753 33481 2 + 729 putative transcription regulator - none -
fig|6666666.67457.peg.562 CDS gi|227860959|gb|ACLI01000099.1| 33510 33659 3 + 150 hypothetical protein - none -
fig|6666666.67457.peg.563 CDS gi|227860959|gb|ACLI01000099.1| 33669 33800 3 + 132 hypothetical protein - none -
fig|6666666.67457.peg.564 CDS gi|227860959|gb|ACLI01000099.1| 34491 34604 3 + 114 Mobile element protein - none -
fig|6666666.67457.peg.565 CDS gi|227860959|gb|ACLI01000099.1| 35021 35332 2 + 312 Mobile element protein - none -
fig|6666666.67457.peg.566 CDS gi|227860959|gb|ACLI01000099.1| 35694 37490 3 + 1797 hypothetical protein - none -
fig|6666666.67457.peg.567 CDS gi|227860959|gb|ACLI01000099.1| 37609 39219 1 + 1611 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.568 CDS gi|227860959|gb|ACLI01000099.1| 39600 40373 3 + 774 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.569 CDS gi|227860959|gb|ACLI01000099.1| 40484 43675 2 + 3192 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.570 CDS gi|227860959|gb|ACLI01000099.1| 44989 43745 -1 - 1245 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.67457.peg.571 CDS gi|227860959|gb|ACLI01000099.1| 46701 45016 -3 - 1686 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.572 CDS gi|227860959|gb|ACLI01000099.1| 47588 46707 -2 - 882 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67457.peg.573 CDS gi|227860959|gb|ACLI01000099.1| 48534 47593 -3 - 942 putative transport protein - none -
fig|6666666.67457.peg.574 CDS gi|227860959|gb|ACLI01000099.1| 50232 48535 -3 - 1698 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.67457.peg.575 CDS gi|227860959|gb|ACLI01000099.1| 50490 52481 3 + 1992 FIG00544299: hypothetical protein - none -
fig|6666666.67457.peg.576 CDS gi|227860959|gb|ACLI01000099.1| 52558 53958 1 + 1401 PLP-dependent aminotransferase - none -
fig|6666666.67457.peg.577 CDS gi|227860959|gb|ACLI01000099.1| 54668 53955 -2 - 714 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67457.peg.578 CDS gi|227860959|gb|ACLI01000099.1| 54787 55530 1 + 744 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.579 CDS gi|227860959|gb|ACLI01000099.1| 55799 55590 -2 - 210 hypothetical protein - none -
fig|6666666.67457.peg.580 CDS gi|227860959|gb|ACLI01000099.1| 56458 56571 1 + 114 hypothetical protein - none -
fig|6666666.67457.peg.581 CDS gi|227860959|gb|ACLI01000099.1| 56766 57737 3 + 972 two-component system sensor kinase - none -
fig|6666666.67457.peg.582 CDS gi|227860959|gb|ACLI01000099.1| 57794 57943 2 + 150 hypothetical protein - none -
fig|6666666.67457.peg.583 CDS gi|227860959|gb|ACLI01000099.1| 57940 58590 1 + 651 putative transcription regulator - none -
fig|6666666.67457.peg.584 CDS gi|227860959|gb|ACLI01000099.1| 59859 58693 -3 - 1167 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.67457.peg.585 CDS gi|227860959|gb|ACLI01000099.1| 60765 59950 -3 - 816 ABC-type transporter, ATPase component - none -
fig|6666666.67457.peg.586 CDS gi|227860959|gb|ACLI01000099.1| 60823 61233 1 + 411 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67457.peg.587 CDS gi|227860959|gb|ACLI01000099.1| 61277 62392 2 + 1116 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.67457.peg.588 CDS gi|227860959|gb|ACLI01000099.1| 63033 62398 -3 - 636 FIG00545013: hypothetical protein - none -
fig|6666666.67457.peg.589 CDS gi|227860959|gb|ACLI01000099.1| 63494 63033 -2 - 462 FIG00544139: hypothetical protein - none -
fig|6666666.67457.peg.590 CDS gi|227860959|gb|ACLI01000099.1| 65360 63690 -2 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.591 CDS gi|227860959|gb|ACLI01000099.1| 66195 65542 -3 - 654 Putative single-strand binding protein - none -
fig|6666666.67457.peg.592 CDS gi|227860959|gb|ACLI01000099.1| 68581 66362 -1 - 2220 Copper resistance protein D Copper homeostasis
fig|6666666.67457.peg.593 CDS gi|227860959|gb|ACLI01000099.1| 69081 69452 3 + 372 hypothetical membrane protein - none -
fig|6666666.67457.peg.594 CDS gi|227860959|gb|ACLI01000099.1| 69756 69935 3 + 180 hypothetical protein - none -
fig|6666666.67457.peg.595 CDS gi|227860959|gb|ACLI01000099.1| 69936 71288 3 + 1353 di- and tricarboxylate transporter - none -
fig|6666666.67457.peg.596 CDS gi|227860959|gb|ACLI01000099.1| 71818 71357 -1 - 462 hypothetical protein - none -
fig|6666666.67457.peg.597 CDS gi|227860959|gb|ACLI01000099.1| 72735 71857 -3 - 879 Putative polysaccharide deacetylase - none -
fig|6666666.67457.peg.598 CDS gi|227860959|gb|ACLI01000099.1| 73741 72773 -1 - 969 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67457.peg.599 CDS gi|227860959|gb|ACLI01000099.1| 73958 75280 2 + 1323 Predicted D-mannonate epimerase D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.600 CDS gi|227860959|gb|ACLI01000099.1| 75306 76160 3 + 855 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.67457.peg.601 CDS gi|227860959|gb|ACLI01000099.1| 76157 76828 2 + 672 Circadian phase modifier - none -
fig|6666666.67457.peg.602 CDS gi|227860959|gb|ACLI01000099.1| 78104 76974 -2 - 1131 FIG00544673: hypothetical protein - none -
fig|6666666.67457.peg.603 CDS gi|227860959|gb|ACLI01000099.1| 78733 78146 -1 - 588 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.67457.peg.604 CDS gi|227860959|gb|ACLI01000099.1| 80929 78743 -1 - 2187 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.67457.peg.605 CDS gi|227860959|gb|ACLI01000099.1| 82347 82823 3 + 477 hypothetical protein - none -
fig|6666666.67457.peg.606 CDS gi|227860959|gb|ACLI01000099.1| 83162 83923 2 + 762 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.67457.peg.607 CDS gi|227860959|gb|ACLI01000099.1| 83958 84758 3 + 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.67457.peg.608 CDS gi|227860959|gb|ACLI01000099.1| 84772 85437 1 + 666 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67457.peg.609 CDS gi|227860959|gb|ACLI01000099.1| 86701 85451 -1 - 1251 FIG00549904: hypothetical protein - none -
fig|6666666.67457.peg.610 CDS gi|227860959|gb|ACLI01000099.1| 86729 86896 2 + 168 hypothetical protein - none -
fig|6666666.67457.peg.611 CDS gi|227860959|gb|ACLI01000099.1| 88118 86907 -2 - 1212 putative lipoprotein - none -
fig|6666666.67457.peg.612 CDS gi|227860959|gb|ACLI01000099.1| 88848 89000 3 + 153 hypothetical protein - none -
fig|6666666.67457.peg.613 CDS gi|227860959|gb|ACLI01000099.1| 89700 89020 -3 - 681 FIG00546362: hypothetical protein - none -
fig|6666666.67457.peg.614 CDS gi|227860959|gb|ACLI01000099.1| 91020 89749 -3 - 1272 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67457.peg.615 CDS gi|227860959|gb|ACLI01000099.1| 91213 92355 1 + 1143 transcriptional regulator - none -
fig|6666666.67457.peg.616 CDS gi|227860959|gb|ACLI01000099.1| 92631 93905 3 + 1275 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.617 CDS gi|227860959|gb|ACLI01000099.1| 93902 95287 2 + 1386 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.618 CDS gi|227860959|gb|ACLI01000099.1| 95299 96678 1 + 1380 Beta-glucuronidase (EC 3.2.1.31) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.619 CDS gi|227860959|gb|ACLI01000099.1| 96713 97141 2 + 429 Beta-glucuronidase (EC 3.2.1.31) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.620 CDS gi|227860959|gb|ACLI01000099.1| 97181 98128 2 + 948 Glucuronide transporter UidB D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.621 CDS gi|227860959|gb|ACLI01000099.1| 98104 99285 1 + 1182 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.67457.peg.622 CDS gi|227860959|gb|ACLI01000099.1| 99519 100019 3 + 501 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67457.peg.623 CDS gi|227860959|gb|ACLI01000099.1| 100135 100695 1 + 561 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.67457.peg.624 CDS gi|227860959|gb|ACLI01000099.1| 101042 100767 -2 - 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67457.peg.625 CDS gi|227860959|gb|ACLI01000099.1| 101192 101668 2 + 477 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67457.peg.626 CDS gi|227860959|gb|ACLI01000099.1| 101681 102379 2 + 699 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.627 CDS gi|227860959|gb|ACLI01000099.1| 102777 102352 -3 - 426 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.67457.peg.628 CDS gi|227860959|gb|ACLI01000099.1| 104244 102784 -3 - 1461 putative transport protein - none -
fig|6666666.67457.peg.629 CDS gi|227860959|gb|ACLI01000099.1| 105721 105572 -1 - 150 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67457.peg.630 CDS gi|227860960|gb|ACLI01000098.1| 844 44 -1 - 801 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67457.peg.631 CDS gi|227860960|gb|ACLI01000098.1| 1613 900 -2 - 714 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67457.peg.632 CDS gi|227860960|gb|ACLI01000098.1| 2152 1679 -1 - 474 Iojap protein - none -
fig|6666666.67457.peg.633 CDS gi|227860960|gb|ACLI01000098.1| 2935 2351 -1 - 585 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67457.peg.634 CDS gi|227860960|gb|ACLI01000098.1| 4097 2979 -2 - 1119 FIG00544655: hypothetical protein - none -
fig|6666666.67457.peg.635 CDS gi|227860960|gb|ACLI01000098.1| 5062 4190 -1 - 873 FIG00544655: hypothetical protein - none -
fig|6666666.67457.peg.636 CDS gi|227860960|gb|ACLI01000098.1| 6426 5110 -3 - 1317 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67457.peg.637 CDS gi|227860960|gb|ACLI01000098.1| 6868 7422 1 + 555 hypothetical protein - none -
fig|6666666.67457.peg.638 CDS gi|227860960|gb|ACLI01000098.1| 7494 8795 3 + 1302 FIG00546540: hypothetical protein - none -
fig|6666666.67457.peg.639 CDS gi|227860960|gb|ACLI01000098.1| 9703 8831 -1 - 873 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.640 CDS gi|227860960|gb|ACLI01000098.1| 11108 9783 -2 - 1326 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.67457.peg.641 CDS gi|227860960|gb|ACLI01000098.1| 12780 11341 -3 - 1440 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.67457.peg.642 CDS gi|227860960|gb|ACLI01000098.1| 12775 12903 1 + 129 hypothetical protein - none -
fig|6666666.67457.peg.643 CDS gi|227860960|gb|ACLI01000098.1| 13111 15000 1 + 1890 xanthine/uracil permease - none -
fig|6666666.67457.peg.644 CDS gi|227860960|gb|ACLI01000098.1| 15914 14997 -2 - 918 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67457.peg.645 CDS gi|227860960|gb|ACLI01000098.1| 16025 16690 2 + 666 FIG00543952: hypothetical protein - none -
fig|6666666.67457.peg.646 CDS gi|227860960|gb|ACLI01000098.1| 17506 17240 -1 - 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67457.peg.647 CDS gi|227860960|gb|ACLI01000098.1| 17851 17546 -1 - 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67457.peg.648 CDS gi|227860960|gb|ACLI01000098.1| 21541 18095 -1 - 3447 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.67457.peg.649 CDS gi|227860960|gb|ACLI01000098.1| 21756 21562 -3 - 195 hypothetical protein - none -
fig|6666666.67457.peg.650 CDS gi|227860960|gb|ACLI01000098.1| 21788 22516 2 + 729 FIG00545459: hypothetical protein - none -
fig|6666666.67457.peg.651 CDS gi|227860960|gb|ACLI01000098.1| 22593 23636 3 + 1044 FIG00547141: hypothetical protein - none -
fig|6666666.67457.peg.652 CDS gi|227860960|gb|ACLI01000098.1| 23637 24089 3 + 453 FIG00548167: hypothetical protein - none -
fig|6666666.67457.peg.653 CDS gi|227860960|gb|ACLI01000098.1| 24565 24155 -1 - 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.67457.peg.654 CDS gi|227860960|gb|ACLI01000098.1| 24953 24624 -2 - 330 FIG00547627: hypothetical protein - none -
fig|6666666.67457.peg.655 CDS gi|227860960|gb|ACLI01000098.1| 25021 25371 1 + 351 FIG00544166: hypothetical protein - none -
fig|6666666.67457.peg.656 CDS gi|227860960|gb|ACLI01000098.1| 25905 25471 -3 - 435 Possible membrane protein - none -
fig|6666666.67457.peg.657 CDS gi|227860960|gb|ACLI01000098.1| 27422 25902 -2 - 1521 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67457.peg.658 CDS gi|227860960|gb|ACLI01000098.1| 30124 27422 -1 - 2703 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67457.peg.659 CDS gi|227860960|gb|ACLI01000098.1| 30255 30557 3 + 303 hypothetical protein - none -
fig|6666666.67457.peg.660 CDS gi|227860960|gb|ACLI01000098.1| 30990 32393 3 + 1404 FIG00543888: hypothetical protein - none -
fig|6666666.67457.peg.661 CDS gi|227860960|gb|ACLI01000098.1| 33461 32490 -2 - 972 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67457.peg.662 CDS gi|227860960|gb|ACLI01000098.1| 33916 34695 1 + 780 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.663 CDS gi|227860960|gb|ACLI01000098.1| 35634 34702 -3 - 933 Auxin Efflux Carrier - none -
fig|6666666.67457.peg.664 CDS gi|227860961|gb|ACLI01000097.1| 1337 30 -2 - 1308 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.67457.peg.665 CDS gi|227860961|gb|ACLI01000097.1| 2066 1347 -2 - 720 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.67457.peg.666 CDS gi|227860961|gb|ACLI01000097.1| 3414 2272 -3 - 1143 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.67457.peg.667 CDS gi|227860961|gb|ACLI01000097.1| 4556 3468 -2 - 1089 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) - none -
fig|6666666.67457.peg.668 CDS gi|227860961|gb|ACLI01000097.1| 4573 5250 1 + 678 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.67457.peg.669 CDS gi|227860961|gb|ACLI01000097.1| 5237 5737 2 + 501 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.67457.peg.670 CDS gi|227860961|gb|ACLI01000097.1| 5817 6911 3 + 1095 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67457.peg.671 CDS gi|227860961|gb|ACLI01000097.1| 7876 6908 -1 - 969 Adenosylcobinamide-phosphate synthase - none -
fig|6666666.67457.peg.672 CDS gi|227860961|gb|ACLI01000097.1| 8542 8111 -1 - 432 FIG00544601: hypothetical protein - none -
fig|6666666.67457.peg.673 CDS gi|227860961|gb|ACLI01000097.1| 9130 9291 1 + 162 hypothetical protein - none -
fig|6666666.67457.peg.674 CDS gi|227860961|gb|ACLI01000097.1| 9327 12098 3 + 2772 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67457.peg.675 CDS gi|227860961|gb|ACLI01000097.1| 12977 12186 -2 - 792 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.676 CDS gi|227860961|gb|ACLI01000097.1| 13927 12986 -1 - 942 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.677 CDS gi|227860961|gb|ACLI01000097.1| 14919 13924 -3 - 996 ABC transporter substrate-binding protein - none -
fig|6666666.67457.peg.678 CDS gi|227860961|gb|ACLI01000097.1| 15160 15882 1 + 723 hypothetical protein - none -
fig|6666666.67457.peg.679 CDS gi|227860961|gb|ACLI01000097.1| 16763 15885 -2 - 879 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.67457.peg.680 CDS gi|227860961|gb|ACLI01000097.1| 16980 17273 3 + 294 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.681 CDS gi|227860961|gb|ACLI01000097.1| 17331 18173 3 + 843 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.67457.peg.682 CDS gi|227860961|gb|ACLI01000097.1| 18228 19319 3 + 1092 FIG00545003: hypothetical protein - none -
fig|6666666.67457.peg.683 CDS gi|227860961|gb|ACLI01000097.1| 19644 19420 -3 - 225 FIG00547381: hypothetical protein - none -
fig|6666666.67457.peg.684 CDS gi|227860961|gb|ACLI01000097.1| 21052 20237 -1 - 816 beta-lactamase class C - none -
fig|6666666.67457.peg.685 CDS gi|227860961|gb|ACLI01000097.1| 21304 21462 1 + 159 hypothetical protein - none -
fig|6666666.67457.peg.686 CDS gi|227860961|gb|ACLI01000097.1| 21466 21687 1 + 222 hypothetical protein - none -
fig|6666666.67457.peg.687 CDS gi|227860961|gb|ACLI01000097.1| 25966 24545 -1 - 1422 hypothetical protein - none -
fig|6666666.67457.peg.688 CDS gi|227860961|gb|ACLI01000097.1| 26634 25966 -3 - 669 hypothetical protein - none -
fig|6666666.67457.peg.689 CDS gi|227860961|gb|ACLI01000097.1| 27250 26828 -1 - 423 hypothetical protein - none -
fig|6666666.67457.peg.690 CDS gi|227860961|gb|ACLI01000097.1| 27372 27250 -3 - 123 hypothetical protein - none -
fig|6666666.67457.peg.691 CDS gi|227860961|gb|ACLI01000097.1| 29645 28431 -2 - 1215 putative integrase - none -
fig|6666666.67457.peg.692 CDS gi|227860961|gb|ACLI01000097.1| 29989 31611 1 + 1623 putative secreted alkaline phosphatase - none -
fig|6666666.67457.peg.693 CDS gi|227860961|gb|ACLI01000097.1| 31971 32426 3 + 456 hypothetical protein - none -
fig|6666666.67457.peg.694 CDS gi|227860961|gb|ACLI01000097.1| 32456 34312 2 + 1857 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.67457.peg.695 CDS gi|227860961|gb|ACLI01000097.1| 34367 34609 2 + 243 FIG00549194: hypothetical protein - none -
fig|6666666.67457.peg.696 CDS gi|227860961|gb|ACLI01000097.1| 36520 34622 -1 - 1899 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.67457.peg.697 CDS gi|227860961|gb|ACLI01000097.1| 36586 37059 1 + 474 putative ribonuclease - none -
fig|6666666.67457.peg.698 CDS gi|227860961|gb|ACLI01000097.1| 37063 37323 1 + 261 FIG00546281: hypothetical protein - none -
fig|6666666.67457.peg.699 CDS gi|227860961|gb|ACLI01000097.1| 39201 37330 -3 - 1872 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67457.peg.700 CDS gi|227860961|gb|ACLI01000097.1| 40666 39386 -1 - 1281 dNTP triphosphohydrolase, broad substrate specificity, subgroup 2 Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.67457.peg.701 CDS gi|227860961|gb|ACLI01000097.1| 41243 40668 -2 - 576 Putative secreted protein - none -
fig|6666666.67457.peg.702 CDS gi|227860961|gb|ACLI01000097.1| 41400 43448 3 + 2049 FIG00543878: hypothetical protein - none -
fig|6666666.67457.peg.703 CDS gi|227860961|gb|ACLI01000097.1| 43952 43464 -2 - 489 FIG00545596: hypothetical protein - none -
fig|6666666.67457.peg.704 CDS gi|227860961|gb|ACLI01000097.1| 44586 44008 -3 - 579 FIG00544046: hypothetical protein - none -
fig|6666666.67457.peg.705 CDS gi|227860961|gb|ACLI01000097.1| 46043 44658 -2 - 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67457.peg.706 CDS gi|227860961|gb|ACLI01000097.1| 46397 46783 2 + 387 putative transcription regulator - none -
fig|6666666.67457.peg.707 CDS gi|227860961|gb|ACLI01000097.1| 46830 47276 3 + 447 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.67457.peg.708 CDS gi|227860961|gb|ACLI01000097.1| 48388 47282 -1 - 1107 FIG00544679: hypothetical protein - none -
fig|6666666.67457.peg.709 CDS gi|227860961|gb|ACLI01000097.1| 49138 48407 -1 - 732 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67457.peg.710 CDS gi|227860961|gb|ACLI01000097.1| 49918 49190 -1 - 729 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67457.peg.711 CDS gi|227860961|gb|ACLI01000097.1| 50864 49947 -2 - 918 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.67457.peg.712 CDS gi|227860961|gb|ACLI01000097.1| 52315 50978 -1 - 1338 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67457.peg.713 CDS gi|227860961|gb|ACLI01000097.1| 52948 52346 -1 - 603 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67457.peg.714 CDS gi|227860961|gb|ACLI01000097.1| 53994 52945 -3 - 1050 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67457.peg.715 CDS gi|227860961|gb|ACLI01000097.1| 54819 54094 -3 - 726 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67457.peg.716 CDS gi|227860961|gb|ACLI01000097.1| 55955 54819 -2 - 1137 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67457.peg.717 CDS gi|227860961|gb|ACLI01000097.1| 57054 56026 -3 - 1029 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67457.peg.718 CDS gi|227860961|gb|ACLI01000097.1| 58591 57395 -1 - 1197 Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.719 CDS gi|227860961|gb|ACLI01000097.1| 58859 59359 2 + 501 hypothetical protein - none -
fig|6666666.67457.peg.720 CDS gi|227860961|gb|ACLI01000097.1| 60136 59459 -1 - 678 FIG00543880: hypothetical protein - none -
fig|6666666.67457.peg.721 CDS gi|227860961|gb|ACLI01000097.1| 60704 60318 -2 - 387 FIG00545489: hypothetical protein - none -
fig|6666666.67457.peg.722 CDS gi|227860961|gb|ACLI01000097.1| 62559 60709 -3 - 1851 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67457.peg.723 CDS gi|227860961|gb|ACLI01000097.1| 62884 65010 1 + 2127 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.724 CDS gi|227860961|gb|ACLI01000097.1| 65147 67012 2 + 1866 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.725 CDS gi|227860961|gb|ACLI01000097.1| 67066 68493 1 + 1428 Formamidase (EC 3.5.1.49) - none -
fig|6666666.67457.peg.726 CDS gi|227860961|gb|ACLI01000097.1| 68505 68813 3 + 309 hypothetical protein - none -
fig|6666666.67457.peg.727 CDS gi|227860961|gb|ACLI01000097.1| 70367 68817 -2 - 1551 Sulfate permease Cysteine Biosynthesis
fig|6666666.67457.peg.728 CDS gi|227860961|gb|ACLI01000097.1| 70533 70922 3 + 390 putative transcription regulator - none -
fig|6666666.67457.peg.729 CDS gi|227860961|gb|ACLI01000097.1| 71150 71010 -2 - 141 FIG00545202: hypothetical protein - none -
fig|6666666.67457.peg.730 CDS gi|227860961|gb|ACLI01000097.1| 71423 71169 -2 - 255 putative secreted or membrane protein - none -
fig|6666666.67457.peg.731 CDS gi|227860961|gb|ACLI01000097.1| 73500 71464 -3 - 2037 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67457.peg.732 CDS gi|227860961|gb|ACLI01000097.1| 73897 75150 1 + 1254 FIG00547479: hypothetical protein - none -
fig|6666666.67457.peg.733 CDS gi|227860961|gb|ACLI01000097.1| 75197 77017 2 + 1821 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.67457.peg.734 CDS gi|227860961|gb|ACLI01000097.1| 77035 78102 1 + 1068 uncharacterized protein probably involved in trehalose biosynthesis - none -
fig|6666666.67457.peg.735 CDS gi|227860961|gb|ACLI01000097.1| 78782 78204 -2 - 579 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.67457.peg.736 CDS gi|227860961|gb|ACLI01000097.1| 80196 78802 -3 - 1395 FIG00546957: hypothetical protein - none -
fig|6666666.67457.peg.737 CDS gi|227860961|gb|ACLI01000097.1| 81484 81125 -1 - 360 FIG00545146: hypothetical protein - none -
fig|6666666.67457.peg.738 CDS gi|227860961|gb|ACLI01000097.1| 81702 82808 3 + 1107 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.67457.peg.739 CDS gi|227860961|gb|ACLI01000097.1| 82809 84086 3 + 1278 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67457.peg.740 CDS gi|227860961|gb|ACLI01000097.1| 84105 85091 3 + 987 FIG00546307: hypothetical protein - none -
fig|6666666.67457.peg.741 CDS gi|227860961|gb|ACLI01000097.1| 85478 87490 2 + 2013 hypothetical protein - none -
fig|6666666.67457.peg.742 CDS gi|227860961|gb|ACLI01000097.1| 87638 87895 2 + 258 hypothetical protein - none -
fig|6666666.67457.peg.743 CDS gi|227860961|gb|ACLI01000097.1| 88414 87965 -1 - 450 hypothetical protein - none -
fig|6666666.67457.peg.744 CDS gi|227860961|gb|ACLI01000097.1| 90498 88651 -3 - 1848 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.67457.peg.745 CDS gi|227860961|gb|ACLI01000097.1| 90691 91698 1 + 1008 Transcriptional regulator - none -
fig|6666666.67457.peg.746 CDS gi|227860961|gb|ACLI01000097.1| 91949 93796 2 + 1848 FAD-binding monooxygenase, PheA/TfdB family, similarity to 2,4-dichlorophenol 6-monooxygenase - none -
fig|6666666.67457.peg.747 CDS gi|227860961|gb|ACLI01000097.1| 94368 93823 -3 - 546 hypothetical membrane protein - none -
fig|6666666.67457.peg.748 CDS gi|227860961|gb|ACLI01000097.1| 95309 94383 -2 - 927 Auxin Efflux Carrier - none -
fig|6666666.67457.peg.749 CDS gi|227860961|gb|ACLI01000097.1| 98171 95316 -2 - 2856 Fe-S protein, homolog of lactate dehydrogenase SO1521 - none -
fig|6666666.67457.peg.750 CDS gi|227860961|gb|ACLI01000097.1| 98342 99007 2 + 666 FIG00547599: hypothetical protein - none -
fig|6666666.67457.peg.751 CDS gi|227860961|gb|ACLI01000097.1| 99178 100698 1 + 1521 putative ABC transporter substrate-binding protein - none -
fig|6666666.67457.peg.752 CDS gi|227860961|gb|ACLI01000097.1| 100695 101630 3 + 936 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67457.peg.753 CDS gi|227860961|gb|ACLI01000097.1| 101627 102499 2 + 873 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67457.peg.754 CDS gi|227860961|gb|ACLI01000097.1| 102501 103922 3 + 1422 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.755 CDS gi|227860961|gb|ACLI01000097.1| 104503 103946 -1 - 558 2@1-5@1 RNA ligase RNA processing orphans
fig|6666666.67457.peg.756 CDS gi|227860961|gb|ACLI01000097.1| 104779 104666 -1 - 114 hypothetical protein - none -
fig|6666666.67457.peg.757 CDS gi|227860961|gb|ACLI01000097.1| 105895 104867 -1 - 1029 FIG00546468: hypothetical protein - none -
fig|6666666.67457.peg.758 CDS gi|227860961|gb|ACLI01000097.1| 106047 106811 3 + 765 FIG00546833: hypothetical protein - none -
fig|6666666.67457.peg.759 CDS gi|227860961|gb|ACLI01000097.1| 109143 106939 -3 - 2205 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67457.peg.760 CDS gi|227860961|gb|ACLI01000097.1| 109659 110954 3 + 1296 Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30) Glyoxylate bypass;
Glyoxylate bypass cluster;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle
fig|6666666.67457.peg.761 CDS gi|227860961|gb|ACLI01000097.1| 111023 111151 2 + 129 hypothetical protein - none -
fig|6666666.67457.peg.762 CDS gi|227860961|gb|ACLI01000097.1| 111764 111171 -2 - 594 Phosphoesterase - none -
fig|6666666.67457.peg.763 CDS gi|227860961|gb|ACLI01000097.1| 112136 111861 -2 - 276 FIG00545616: hypothetical protein - none -
fig|6666666.67457.peg.764 CDS gi|227860961|gb|ACLI01000097.1| 112532 113524 2 + 993 FIG00545079: hypothetical protein - none -
fig|6666666.67457.peg.765 CDS gi|227860961|gb|ACLI01000097.1| 113723 115714 2 + 1992 FIG00545027: hypothetical protein - none -
fig|6666666.67457.peg.766 CDS gi|227860961|gb|ACLI01000097.1| 116588 116028 -2 - 561 hypothetical protein - none -
fig|6666666.67457.peg.767 CDS gi|227860961|gb|ACLI01000097.1| 118217 116901 -2 - 1317 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.67457.peg.768 CDS gi|227860961|gb|ACLI01000097.1| 118795 118217 -1 - 579 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism
fig|6666666.67457.peg.769 CDS gi|227860961|gb|ACLI01000097.1| 119946 118792 -3 - 1155 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.67457.peg.770 CDS gi|227860961|gb|ACLI01000097.1| 120098 120223 2 + 126 hypothetical protein - none -
fig|6666666.67457.peg.771 CDS gi|227860961|gb|ACLI01000097.1| 122067 120220 -3 - 1848 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67457.peg.772 CDS gi|227860961|gb|ACLI01000097.1| 122383 123012 1 + 630 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase;
tRNA splicing
fig|6666666.67457.peg.773 CDS gi|227860961|gb|ACLI01000097.1| 123237 123500 3 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.67457.peg.774 CDS gi|227860961|gb|ACLI01000097.1| 124296 123622 -3 - 675 L-lysine permease - none -
fig|6666666.67457.peg.775 CDS gi|227860961|gb|ACLI01000097.1| 124702 124301 -1 - 402 ankyrin repeat containing protein - none -
fig|6666666.67457.peg.776 CDS gi|227860961|gb|ACLI01000097.1| 125783 124797 -2 - 987 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67457.peg.777 CDS gi|227860961|gb|ACLI01000097.1| 127447 125801 -1 - 1647 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.67457.peg.778 CDS gi|227860961|gb|ACLI01000097.1| 128157 127444 -3 - 714 FIG00545717: hypothetical protein - none -
fig|6666666.67457.peg.779 CDS gi|227860961|gb|ACLI01000097.1| 128388 129098 3 + 711 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67457.peg.780 CDS gi|227860962|gb|ACLI01000096.1| 62 1102 2 + 1041 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67457.peg.781 CDS gi|227860962|gb|ACLI01000096.1| 1205 1972 2 + 768 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67457.peg.782 CDS gi|227860962|gb|ACLI01000096.1| 2141 3160 2 + 1020 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67457.peg.783 CDS gi|227860962|gb|ACLI01000096.1| 3342 4124 3 + 783 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67457.peg.784 CDS gi|227860962|gb|ACLI01000096.1| 4246 5874 1 + 1629 putative transport protein - none -
fig|6666666.67457.peg.785 CDS gi|227860962|gb|ACLI01000096.1| 6400 5927 -1 - 474 FIG00543905: hypothetical protein - none -
fig|6666666.67457.peg.786 CDS gi|227860962|gb|ACLI01000096.1| 6702 8135 3 + 1434 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.787 CDS gi|227860962|gb|ACLI01000096.1| 8286 9110 3 + 825 Membrane protein, putative - none -
fig|6666666.67457.peg.788 CDS gi|227860962|gb|ACLI01000096.1| 10058 9156 -2 - 903 putative secreted hydrolase - none -
fig|6666666.67457.peg.789 CDS gi|227860962|gb|ACLI01000096.1| 10414 10959 1 + 546 hypothetical protein - none -
fig|6666666.67457.peg.790 CDS gi|227860962|gb|ACLI01000096.1| 11253 12392 3 + 1140 hypothetical protein - none -
fig|6666666.67457.peg.791 CDS gi|227860962|gb|ACLI01000096.1| 12844 13164 1 + 321 hypothetical protein - none -
fig|6666666.67457.peg.792 CDS gi|227860962|gb|ACLI01000096.1| 14176 13412 -1 - 765 Mobile element protein - none -
fig|6666666.67457.peg.793 CDS gi|227860962|gb|ACLI01000096.1| 15775 14180 -1 - 1596 Mobile element protein - none -
fig|6666666.67457.peg.794 CDS gi|227860962|gb|ACLI01000096.1| 15829 16116 1 + 288 hypothetical protein - none -
fig|6666666.67457.peg.795 CDS gi|227860962|gb|ACLI01000096.1| 16609 17769 1 + 1161 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67457.peg.796 CDS gi|227860962|gb|ACLI01000096.1| 17820 19265 3 + 1446 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.797 CDS gi|227860962|gb|ACLI01000096.1| 19508 19341 -2 - 168 FIG00545761: hypothetical protein - none -
fig|6666666.67457.peg.798 CDS gi|227860962|gb|ACLI01000096.1| 20418 19840 -3 - 579 FIG00544729: hypothetical protein - none -
fig|6666666.67457.peg.799 CDS gi|227860962|gb|ACLI01000096.1| 20487 21449 3 + 963 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase( EC:1.14.14.3 ) - none -
fig|6666666.67457.peg.800 CDS gi|227860962|gb|ACLI01000096.1| 22341 21406 -3 - 936 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.801 CDS gi|227860962|gb|ACLI01000096.1| 22449 22802 3 + 354 FIG00544301: hypothetical protein - none -
fig|6666666.67457.peg.802 CDS gi|227860962|gb|ACLI01000096.1| 24316 22871 -1 - 1446 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67457.peg.803 CDS gi|227860962|gb|ACLI01000096.1| 24450 24674 3 + 225 hypothetical protein - none -
fig|6666666.67457.peg.804 CDS gi|227860962|gb|ACLI01000096.1| 24773 26098 2 + 1326 FIG00545265: hypothetical protein - none -
fig|6666666.67457.peg.805 CDS gi|227860962|gb|ACLI01000096.1| 26694 26164 -3 - 531 FIG01270316: hypothetical protein - none -
fig|6666666.67457.peg.806 CDS gi|227860962|gb|ACLI01000096.1| 30070 26918 -1 - 3153 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.67457.peg.807 CDS gi|227860962|gb|ACLI01000096.1| 31447 30107 -1 - 1341 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.808 CDS gi|227860962|gb|ACLI01000096.1| 31646 32800 2 + 1155 FIG00544769: hypothetical protein - none -
fig|6666666.67457.peg.809 CDS gi|227860962|gb|ACLI01000096.1| 32867 34765 2 + 1899 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.67457.peg.810 CDS gi|227860962|gb|ACLI01000096.1| 34775 34891 2 + 117 hypothetical protein - none -
fig|6666666.67457.peg.811 CDS gi|227860962|gb|ACLI01000096.1| 35073 34888 -3 - 186 FIG00544054: hypothetical protein - none -
fig|6666666.67457.peg.812 CDS gi|227860962|gb|ACLI01000096.1| 35235 36545 3 + 1311 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.67457.peg.813 CDS gi|227860962|gb|ACLI01000096.1| 37966 36557 -1 - 1410 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.67457.peg.814 CDS gi|227860963|gb|ACLI01000095.1| 1512 106 -3 - 1407 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67457.peg.815 CDS gi|227860963|gb|ACLI01000095.1| 2412 1573 -3 - 840 permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.67457.peg.816 CDS gi|227860963|gb|ACLI01000095.1| 2676 3317 3 + 642 hypothetical protein - none -
fig|6666666.67457.peg.817 CDS gi|227860963|gb|ACLI01000095.1| 6583 3419 -1 - 3165 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67457.peg.818 CDS gi|227860963|gb|ACLI01000095.1| 7161 6940 -3 - 222 hypothetical protein - none -
fig|6666666.67457.peg.819 CDS gi|227860963|gb|ACLI01000095.1| 8422 7361 -1 - 1062 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67457.peg.820 CDS gi|227860963|gb|ACLI01000095.1| 9193 8921 -1 - 273 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67457.peg.821 CDS gi|227860963|gb|ACLI01000095.1| 9962 9501 -2 - 462 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67457.peg.822 CDS gi|227860963|gb|ACLI01000095.1| 10749 10045 -3 - 705 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67457.peg.823 CDS gi|227860963|gb|ACLI01000095.1| 11385 10750 -3 - 636 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67457.peg.824 CDS gi|227860963|gb|ACLI01000095.1| 12808 11516 -1 - 1293 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67457.peg.825 CDS gi|227860963|gb|ACLI01000095.1| 13718 13050 -2 - 669 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67457.peg.826 CDS gi|227860963|gb|ACLI01000095.1| 15179 13725 -2 - 1455 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67457.peg.827 CDS gi|227860963|gb|ACLI01000095.1| 16312 15230 -1 - 1083 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67457.peg.828 CDS gi|227860963|gb|ACLI01000095.1| 18034 16352 -1 - 1683 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67457.peg.829 CDS gi|227860963|gb|ACLI01000095.1| 19471 18044 -1 - 1428 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67457.peg.830 CDS gi|227860963|gb|ACLI01000095.1| 20596 19496 -1 - 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67457.peg.831 CDS gi|227860963|gb|ACLI01000095.1| 22117 20603 -1 - 1515 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67457.peg.832 CDS gi|227860963|gb|ACLI01000095.1| 23657 22128 -2 - 1530 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67457.peg.833 CDS gi|227860963|gb|ACLI01000095.1| 25930 23783 -1 - 2148 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.834 CDS gi|227860963|gb|ACLI01000095.1| 26724 25927 -3 - 798 FIG00544004: hypothetical protein - none -
fig|6666666.67457.peg.835 CDS gi|227860963|gb|ACLI01000095.1| 27751 26735 -1 - 1017 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67457.peg.836 CDS gi|227860963|gb|ACLI01000095.1| 28430 27990 -2 - 441 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67457.peg.837 CDS gi|227860963|gb|ACLI01000095.1| 29368 28976 -1 - 393 Possible membrane protein - none -
fig|6666666.67457.peg.838 CDS gi|227860963|gb|ACLI01000095.1| 30097 29672 -1 - 426 FIG00544752: hypothetical protein - none -
fig|6666666.67457.peg.839 CDS gi|227860963|gb|ACLI01000095.1| 30401 30919 2 + 519 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67457.peg.840 CDS gi|227860963|gb|ACLI01000095.1| 31916 30936 -2 - 981 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67457.peg.841 CDS gi|227860963|gb|ACLI01000095.1| 32025 33125 3 + 1101 Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67457.peg.842 CDS gi|227860963|gb|ACLI01000095.1| 33137 34702 2 + 1566 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67457.peg.843 CDS gi|227860963|gb|ACLI01000095.1| 35185 34814 -1 - 372 Conserved hypothetical regulatory protein - none -
fig|6666666.67457.peg.844 CDS gi|227860963|gb|ACLI01000095.1| 35367 37511 3 + 2145 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67457.peg.845 CDS gi|227860963|gb|ACLI01000095.1| 37548 38786 3 + 1239 FIG00549427: hypothetical protein - none -
fig|6666666.67457.peg.846 CDS gi|227860963|gb|ACLI01000095.1| 38910 40274 3 + 1365 FIG00544316: hypothetical protein - none -
fig|6666666.67457.peg.847 CDS gi|227860963|gb|ACLI01000095.1| 41782 40394 -1 - 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.848 CDS gi|227860963|gb|ACLI01000095.1| 42382 41873 -1 - 510 FIG00544385: hypothetical protein - none -
fig|6666666.67457.peg.849 CDS gi|227860963|gb|ACLI01000095.1| 42564 45077 3 + 2514 putative membrane protein - none -
fig|6666666.67457.peg.850 CDS gi|227860963|gb|ACLI01000095.1| 46420 45182 -1 - 1239 hypothetical membrane protein - none -
fig|6666666.67457.peg.851 CDS gi|227860963|gb|ACLI01000095.1| 47360 46629 -2 - 732 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.852 CDS gi|227860963|gb|ACLI01000095.1| 48491 47523 -2 - 969 ROK family protein (putative glucokinase) - none -
fig|6666666.67457.peg.853 CDS gi|227860963|gb|ACLI01000095.1| 49727 48588 -2 - 1140 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67457.peg.854 CDS gi|227860963|gb|ACLI01000095.1| 50785 49775 -1 - 1011 NLP/P60 family protein - none -
fig|6666666.67457.peg.855 CDS gi|227860963|gb|ACLI01000095.1| 51605 50973 -2 - 633 putative secreted protein - none -
fig|6666666.67457.peg.856 CDS gi|227860963|gb|ACLI01000095.1| 54664 53039 -1 - 1626 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67457.peg.857 CDS gi|227860963|gb|ACLI01000095.1| 55887 54661 -3 - 1227 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67457.peg.858 CDS gi|227860963|gb|ACLI01000095.1| 56774 55884 -2 - 891 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67457.peg.859 CDS gi|227860963|gb|ACLI01000095.1| 57448 56858 -1 - 591 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67457.peg.860 CDS gi|227860963|gb|ACLI01000095.1| 58667 58236 -2 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67457.peg.861 CDS gi|227860963|gb|ACLI01000095.1| 59689 58685 -1 - 1005 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67457.peg.862 CDS gi|227860963|gb|ACLI01000095.1| 60327 62249 3 + 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67457.peg.863 CDS gi|227860963|gb|ACLI01000095.1| 62753 62409 -2 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67457.peg.864 CDS gi|227860963|gb|ACLI01000095.1| 63184 63807 1 + 624 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67457.peg.865 CDS gi|227860963|gb|ACLI01000095.1| 63812 64342 2 + 531 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) - none -
fig|6666666.67457.peg.866 CDS gi|227860963|gb|ACLI01000095.1| 64377 65480 3 + 1104 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.67457.peg.867 CDS gi|227860963|gb|ACLI01000095.1| 65481 66308 3 + 828 Cobalamin synthase - none -
fig|6666666.67457.peg.868 CDS gi|227860963|gb|ACLI01000095.1| 67387 66665 -1 - 723 Short chain dehydrogenase - none -
fig|6666666.67457.peg.869 CDS gi|227860963|gb|ACLI01000095.1| 68599 67517 -1 - 1083 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67457.peg.870 CDS gi|227860963|gb|ACLI01000095.1| 68797 70347 1 + 1551 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67457.peg.871 CDS gi|227860963|gb|ACLI01000095.1| 70680 70354 -3 - 327 Putative oxidoreductase - none -
fig|6666666.67457.peg.872 CDS gi|227860964|gb|ACLI01000094.1| 701 2029 2 + 1329 hypothetical protein - none -
fig|6666666.67457.peg.873 CDS gi|227860964|gb|ACLI01000094.1| 2325 2026 -3 - 300 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67457.peg.874 CDS gi|227860964|gb|ACLI01000094.1| 3778 2306 -1 - 1473 amino acid carrier protein - none -
fig|6666666.67457.peg.875 CDS gi|227860964|gb|ACLI01000094.1| 4663 3806 -1 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67457.peg.876 CDS gi|227860964|gb|ACLI01000094.1| 5399 4656 -2 - 744 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67457.peg.877 CDS gi|227860964|gb|ACLI01000094.1| 5935 5396 -1 - 540 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67457.peg.878 CDS gi|227860964|gb|ACLI01000094.1| 6916 6134 -1 - 783 Cell division initiation protein - none -
fig|6666666.67457.peg.879 CDS gi|227860964|gb|ACLI01000094.1| 7096 8742 1 + 1647 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.880 CDS gi|227860964|gb|ACLI01000094.1| 8739 9719 3 + 981 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.881 CDS gi|227860964|gb|ACLI01000094.1| 9725 10264 2 + 540 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.882 CDS gi|227860964|gb|ACLI01000094.1| 11737 10394 -1 - 1344 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67457.peg.883 CDS gi|227860964|gb|ACLI01000094.1| 12263 13375 2 + 1113 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67457.peg.884 CDS gi|227860964|gb|ACLI01000094.1| 13770 13372 -3 - 399 FIG00544156: hypothetical protein - none -
fig|6666666.67457.peg.885 CDS gi|227860964|gb|ACLI01000094.1| 13801 15135 1 + 1335 No significant database matches - none -
fig|6666666.67457.peg.886 CDS gi|227860964|gb|ACLI01000094.1| 15201 16478 3 + 1278 Peptidase M20D, amidohydrolase - none -
fig|6666666.67457.peg.887 CDS gi|227860964|gb|ACLI01000094.1| 19147 16574 -1 - 2574 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.888 CDS gi|227860964|gb|ACLI01000094.1| 20160 19258 -3 - 903 Glyoxalase family protein - none -
fig|6666666.67457.peg.889 CDS gi|227860964|gb|ACLI01000094.1| 21679 20339 -1 - 1341 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67457.peg.890 CDS gi|227860964|gb|ACLI01000094.1| 22977 22009 -3 - 969 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67457.peg.891 CDS gi|227860964|gb|ACLI01000094.1| 23130 22993 -3 - 138 hypothetical protein - none -
fig|6666666.67457.peg.892 CDS gi|227860964|gb|ACLI01000094.1| 23936 23151 -2 - 786 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67457.peg.893 CDS gi|227860964|gb|ACLI01000094.1| 24693 24028 -3 - 666 FIG00545012: hypothetical protein - none -
fig|6666666.67457.peg.894 CDS gi|227860964|gb|ACLI01000094.1| 25186 24797 -1 - 390 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis
fig|6666666.67457.peg.895 CDS gi|227860964|gb|ACLI01000094.1| 25959 25183 -3 - 777 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67457.peg.896 CDS gi|227860964|gb|ACLI01000094.1| 26853 26062 -3 - 792 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67457.peg.897 CDS gi|227860964|gb|ACLI01000094.1| 27598 26858 -1 - 741 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.67457.peg.898 CDS gi|227860964|gb|ACLI01000094.1| 28253 27618 -2 - 636 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67457.peg.899 CDS gi|227860964|gb|ACLI01000094.1| 28416 29558 3 + 1143 putative transport protein - none -
fig|6666666.67457.peg.900 CDS gi|227860964|gb|ACLI01000094.1| 31019 29598 -2 - 1422 putative transport protein - none -
fig|6666666.67457.peg.901 CDS gi|227860964|gb|ACLI01000094.1| 31239 31021 -3 - 219 FIG00544135: hypothetical protein - none -
fig|6666666.67457.peg.902 CDS gi|227860964|gb|ACLI01000094.1| 31860 31252 -3 - 609 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67457.peg.903 CDS gi|227860964|gb|ACLI01000094.1| 33034 31916 -1 - 1119 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67457.peg.904 CDS gi|227860964|gb|ACLI01000094.1| 34409 33054 -2 - 1356 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67457.peg.905 CDS gi|227860964|gb|ACLI01000094.1| 34380 34505 3 + 126 hypothetical protein - none -
fig|6666666.67457.peg.906 CDS gi|227860964|gb|ACLI01000094.1| 34813 36279 1 + 1467 FIG00546979: hypothetical protein - none -
fig|6666666.67457.peg.907 CDS gi|227860964|gb|ACLI01000094.1| 36861 36247 -3 - 615 FIG00545115: hypothetical protein - none -
fig|6666666.67457.peg.908 CDS gi|227860964|gb|ACLI01000094.1| 37701 36928 -3 - 774 putative transcription regulator - none -
fig|6666666.67457.peg.909 CDS gi|227860964|gb|ACLI01000094.1| 38504 37815 -2 - 690 FIG00545144: hypothetical protein - none -
fig|6666666.67457.peg.910 CDS gi|227860964|gb|ACLI01000094.1| 38617 39189 1 + 573 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.67457.peg.911 CDS gi|227860964|gb|ACLI01000094.1| 39196 41850 1 + 2655 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67457.peg.912 CDS gi|227860964|gb|ACLI01000094.1| 42648 41863 -3 - 786 putative iron ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.913 CDS gi|227860964|gb|ACLI01000094.1| 43721 42675 -2 - 1047 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.67457.peg.914 CDS gi|227860964|gb|ACLI01000094.1| 44804 43773 -2 - 1032 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.67457.peg.915 CDS gi|227860964|gb|ACLI01000094.1| 44949 44818 -3 - 132 hypothetical protein - none -
fig|6666666.67457.peg.916 CDS gi|227860964|gb|ACLI01000094.1| 45552 45013 -3 - 540 Transcriptional regulator, HxlR family - none -
fig|6666666.67457.peg.917 CDS gi|227860964|gb|ACLI01000094.1| 45867 47375 3 + 1509 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67457.peg.918 CDS gi|227860964|gb|ACLI01000094.1| 47480 48178 2 + 699 FIG00547564: hypothetical protein - none -
fig|6666666.67457.peg.919 CDS gi|227860964|gb|ACLI01000094.1| 48295 50736 1 + 2442 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.67457.peg.920 CDS gi|227860964|gb|ACLI01000094.1| 50793 51920 3 + 1128 FIG00544169: hypothetical protein - none -
fig|6666666.67457.peg.921 CDS gi|227860964|gb|ACLI01000094.1| 52019 52150 2 + 132 FIG00544735: hypothetical protein - none -
fig|6666666.67457.peg.922 CDS gi|227860964|gb|ACLI01000094.1| 52363 53427 1 + 1065 putative oxidoreductase - none -
fig|6666666.67457.peg.923 CDS gi|227860964|gb|ACLI01000094.1| 53816 53430 -2 - 387 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67457.peg.924 CDS gi|227860964|gb|ACLI01000094.1| 54060 53833 -3 - 228 FIG00544856: hypothetical protein - none -
fig|6666666.67457.peg.925 CDS gi|227860964|gb|ACLI01000094.1| 54807 54097 -3 - 711 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.67457.peg.926 CDS gi|227860964|gb|ACLI01000094.1| 54858 56585 3 + 1728 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) Trehalose Biosynthesis
fig|6666666.67457.peg.927 CDS gi|227860964|gb|ACLI01000094.1| 57902 56628 -2 - 1275 Threonine dehydratase (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis;
Threonine degradation
fig|6666666.67457.peg.928 CDS gi|227860964|gb|ACLI01000094.1| 58211 58684 2 + 474 hypothetical membrane protein - none -
fig|6666666.67457.peg.929 CDS gi|227860964|gb|ACLI01000094.1| 59991 58786 -3 - 1206 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.67457.peg.930 CDS gi|227860964|gb|ACLI01000094.1| 63681 60115 -3 - 3567 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67457.peg.931 CDS gi|227860964|gb|ACLI01000094.1| 63789 64670 3 + 882 Protein rarD - none -
fig|6666666.67457.peg.932 CDS gi|227860964|gb|ACLI01000094.1| 65270 64653 -2 - 618 FIG00544566: hypothetical protein - none -
fig|6666666.67457.peg.933 CDS gi|227860964|gb|ACLI01000094.1| 66196 65267 -1 - 930 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67457.peg.934 CDS gi|227860964|gb|ACLI01000094.1| 66702 66193 -3 - 510 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67457.peg.935 CDS gi|227860964|gb|ACLI01000094.1| 66775 66966 1 + 192 hypothetical protein - none -
fig|6666666.67457.peg.936 CDS gi|227860964|gb|ACLI01000094.1| 66963 68051 3 + 1089 FIG00544955: hypothetical protein - none -
fig|6666666.67457.peg.937 CDS gi|227860964|gb|ACLI01000094.1| 68259 69893 3 + 1635 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.938 CDS gi|227860964|gb|ACLI01000094.1| 70617 69916 -3 - 702 Putative secreted protein - none -
fig|6666666.67457.peg.939 CDS gi|227860964|gb|ACLI01000094.1| 71154 72068 3 + 915 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.940 CDS gi|227860964|gb|ACLI01000094.1| 72065 73702 2 + 1638 hypothetical protein - none -
fig|6666666.67457.peg.941 CDS gi|227860964|gb|ACLI01000094.1| 74293 73706 -1 - 588 hypothetical protein - none -
fig|6666666.67457.peg.942 CDS gi|227860965|gb|ACLI01000093.1| 916 14 -1 - 903 Mobile element protein - none -
fig|6666666.67457.peg.943 CDS gi|227860965|gb|ACLI01000093.1| 1104 913 -3 - 192 Mobile element protein - none -
fig|6666666.67457.peg.944 CDS gi|227860965|gb|ACLI01000093.1| 1641 2207 3 + 567 Transposase - none -
fig|6666666.67457.peg.945 CDS gi|227860965|gb|ACLI01000093.1| 2340 2738 3 + 399 Mobile element protein - none -
fig|6666666.67457.peg.946 CDS gi|227860965|gb|ACLI01000093.1| 3425 2886 -2 - 540 hypothetical protein - none -
fig|6666666.67457.peg.947 CDS gi|227860965|gb|ACLI01000093.1| 4360 3989 -1 - 372 FIG00545499: hypothetical protein - none -
fig|6666666.67457.peg.948 CDS gi|227860965|gb|ACLI01000093.1| 5173 4433 -1 - 741 FIG00545875: hypothetical protein - none -
fig|6666666.67457.peg.949 CDS gi|227860965|gb|ACLI01000093.1| 6081 5215 -3 - 867 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67457.peg.950 CDS gi|227860965|gb|ACLI01000093.1| 6627 6118 -3 - 510 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.67457.peg.951 CDS gi|227860965|gb|ACLI01000093.1| 6740 7102 2 + 363 hypothetical protein - none -
fig|6666666.67457.peg.952 CDS gi|227860965|gb|ACLI01000093.1| 7103 7438 2 + 336 FIG00544922: hypothetical protein - none -
fig|6666666.67457.peg.953 CDS gi|227860965|gb|ACLI01000093.1| 8042 7536 -2 - 507 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.67457.peg.954 CDS gi|227860965|gb|ACLI01000093.1| 8337 8813 3 + 477 putative ankyrin repeat-containing protein - none -
fig|6666666.67457.peg.955 CDS gi|227860965|gb|ACLI01000093.1| 9763 8894 -1 - 870 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.956 CDS gi|227860965|gb|ACLI01000093.1| 10701 9760 -3 - 942 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.957 CDS gi|227860965|gb|ACLI01000093.1| 10704 10826 3 + 123 hypothetical protein - none -
fig|6666666.67457.peg.958 CDS gi|227860965|gb|ACLI01000093.1| 12158 10863 -2 - 1296 putative efflux protein - none -
fig|6666666.67457.peg.959 CDS gi|227860965|gb|ACLI01000093.1| 13879 12257 -1 - 1623 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67457.peg.960 CDS gi|227860965|gb|ACLI01000093.1| 16056 13978 -3 - 2079 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.67457.peg.961 CDS gi|227860965|gb|ACLI01000093.1| 16434 16096 -3 - 339 nitrogen regulatory protein PII - none -
fig|6666666.67457.peg.962 CDS gi|227860965|gb|ACLI01000093.1| 17834 16518 -2 - 1317 Ammonium transporter Ammonia assimilation
fig|6666666.67457.peg.963 CDS gi|227860965|gb|ACLI01000093.1| 20055 18241 -3 - 1815 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67457.peg.964 CDS gi|227860965|gb|ACLI01000093.1| 23678 20298 -2 - 3381 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.67457.peg.965 CDS gi|227860965|gb|ACLI01000093.1| 25317 23887 -3 - 1431 Chromosome partition protein smc - none -
fig|6666666.67457.peg.966 CDS gi|227860966|gb|ACLI01000092.1| 318 13 -3 - 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67457.peg.967 CDS gi|227860966|gb|ACLI01000092.1| 1003 308 -1 - 696 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H;
Ribonucleases in Bacillus
fig|6666666.67457.peg.968 CDS gi|227860966|gb|ACLI01000092.1| 1885 1070 -1 - 816 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67457.peg.969 CDS gi|227860966|gb|ACLI01000092.1| 2016 3728 3 + 1713 ABC transporter, NBP/MSD fusion protein - none -
fig|6666666.67457.peg.970 CDS gi|227860966|gb|ACLI01000092.1| 4358 3729 -2 - 630 hypothetical protein - none -
fig|6666666.67457.peg.971 CDS gi|227860966|gb|ACLI01000092.1| 4550 5959 2 + 1410 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67457.peg.972 CDS gi|227860966|gb|ACLI01000092.1| 5963 7009 2 + 1047 putative integral membrane protein - none -
fig|6666666.67457.peg.973 CDS gi|227860966|gb|ACLI01000092.1| 8563 7160 -1 - 1404 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67457.peg.974 CDS gi|227860966|gb|ACLI01000092.1| 9371 9030 -2 - 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67457.peg.975 CDS gi|227860966|gb|ACLI01000092.1| 9725 10375 2 + 651 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67457.peg.976 CDS gi|227860966|gb|ACLI01000092.1| 10372 11442 1 + 1071 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.67457.peg.977 CDS gi|227860966|gb|ACLI01000092.1| 11439 11639 3 + 201 hypothetical protein - none -
fig|6666666.67457.peg.978 CDS gi|227860966|gb|ACLI01000092.1| 11643 12422 3 + 780 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67457.peg.979 CDS gi|227860966|gb|ACLI01000092.1| 12423 13544 3 + 1122 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67457.peg.980 CDS gi|227860966|gb|ACLI01000092.1| 14784 13597 -3 - 1188 Radical SAM domain heme biosynthesis protein - none -
fig|6666666.67457.peg.981 CDS gi|227860966|gb|ACLI01000092.1| 17165 14838 -2 - 2328 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67457.peg.982 CDS gi|227860966|gb|ACLI01000092.1| 19098 17194 -3 - 1905 Cadmium-transporting ATPase (EC 3.6.3.3) Cobalt-zinc-cadmium resistance
fig|6666666.67457.peg.983 CDS gi|227860966|gb|ACLI01000092.1| 20276 19284 -2 - 993 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.984 CDS gi|227860966|gb|ACLI01000092.1| 21144 20989 -3 - 156 hypothetical protein - none -
fig|6666666.67457.peg.985 CDS gi|227860966|gb|ACLI01000092.1| 21760 22851 1 + 1092 FIG00549266: hypothetical protein - none -
fig|6666666.67457.peg.986 CDS gi|227860967|gb|ACLI01000091.1| 736 362 -1 - 375 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67457.peg.987 CDS gi|227860967|gb|ACLI01000091.1| 2015 1017 -2 - 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67457.peg.988 CDS gi|227860967|gb|ACLI01000091.1| 2592 2044 -3 - 549 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67457.peg.989 CDS gi|227860967|gb|ACLI01000091.1| 2646 3512 3 + 867 FIG00544866: hypothetical protein - none -
fig|6666666.67457.peg.990 CDS gi|227860967|gb|ACLI01000091.1| 3913 5520 1 + 1608 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.67457.peg.991 CDS gi|227860967|gb|ACLI01000091.1| 5692 6585 1 + 894 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.992 CDS gi|227860967|gb|ACLI01000091.1| 6578 7615 2 + 1038 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.993 CDS gi|227860967|gb|ACLI01000091.1| 7612 9351 1 + 1740 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.994 CDS gi|227860967|gb|ACLI01000091.1| 11210 9444 -2 - 1767 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.67457.peg.995 CDS gi|227860967|gb|ACLI01000091.1| 11524 12261 1 + 738 UPF0246 protein YaaA - none -
fig|6666666.67457.peg.996 CDS gi|227860967|gb|ACLI01000091.1| 13029 12283 -3 - 747 ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67457.peg.997 CDS gi|227860967|gb|ACLI01000091.1| 14155 13049 -1 - 1107 ChlI component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67457.peg.998 CDS gi|227860967|gb|ACLI01000091.1| 15184 14390 -1 - 795 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.999 CDS gi|227860967|gb|ACLI01000091.1| 15226 16704 1 + 1479 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67457.peg.1000 CDS gi|227860967|gb|ACLI01000091.1| 18348 16846 -3 - 1503 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67457.peg.1001 CDS gi|227860967|gb|ACLI01000091.1| 18754 19791 1 + 1038 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67457.peg.1002 CDS gi|227860967|gb|ACLI01000091.1| 20018 19854 -2 - 165 hypothetical protein - none -
fig|6666666.67457.peg.1003 CDS gi|227860967|gb|ACLI01000091.1| 20140 21525 1 + 1386 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67457.peg.1004 CDS gi|227860967|gb|ACLI01000091.1| 21950 22297 2 + 348 FIG00544201: hypothetical protein - none -
fig|6666666.67457.peg.1005 CDS gi|227860967|gb|ACLI01000091.1| 22340 22750 2 + 411 FIG00544201: hypothetical protein - none -
fig|6666666.67457.peg.1006 CDS gi|227860967|gb|ACLI01000091.1| 25156 23675 -1 - 1482 Cobyric acid synthase - none -
fig|6666666.67457.peg.1007 CDS gi|227860967|gb|ACLI01000091.1| 26046 25162 -3 - 885 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67457.peg.1008 CDS gi|227860967|gb|ACLI01000091.1| 27992 26136 -2 - 1857 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.1009 CDS gi|227860967|gb|ACLI01000091.1| 29314 28133 -1 - 1182 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67457.peg.1010 CDS gi|227860967|gb|ACLI01000091.1| 30685 29471 -1 - 1215 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.67457.peg.1011 CDS gi|227860967|gb|ACLI01000091.1| 31919 30735 -2 - 1185 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67457.peg.1012 CDS gi|227860967|gb|ACLI01000091.1| 32305 32736 1 + 432 hypothetical membrane protein - none -
fig|6666666.67457.peg.1013 CDS gi|227860967|gb|ACLI01000091.1| 34003 32939 -1 - 1065 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67457.peg.1014 CDS gi|227860967|gb|ACLI01000091.1| 34206 34673 3 + 468 FIG00544474: hypothetical protein - none -
fig|6666666.67457.peg.1015 CDS gi|227860967|gb|ACLI01000091.1| 35657 34764 -2 - 894 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.1016 CDS gi|227860967|gb|ACLI01000091.1| 36368 35811 -2 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67457.peg.1017 CDS gi|227860967|gb|ACLI01000091.1| 37167 36436 -3 - 732 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67457.peg.1018 CDS gi|227860967|gb|ACLI01000091.1| 37226 37360 2 + 135 hypothetical protein - none -
fig|6666666.67457.peg.1019 CDS gi|227860967|gb|ACLI01000091.1| 38296 37469 -1 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67457.peg.1020 CDS gi|227860967|gb|ACLI01000091.1| 39337 38507 -1 - 831 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.67457.peg.1021 CDS gi|227860967|gb|ACLI01000091.1| 39785 39648 -2 - 138 hypothetical protein - none -
fig|6666666.67457.peg.1022 CDS gi|227860967|gb|ACLI01000091.1| 41154 40264 -3 - 891 Tyrosine recombinase XerC - none -
fig|6666666.67457.peg.1023 CDS gi|227860967|gb|ACLI01000091.1| 42679 41468 -1 - 1212 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67457.peg.1024 CDS gi|227860967|gb|ACLI01000091.1| 44199 42676 -3 - 1524 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67457.peg.1025 CDS gi|227860967|gb|ACLI01000091.1| 44554 44186 -1 - 369 hypothetical protein - none -
fig|6666666.67457.peg.1026 CDS gi|227860968|gb|ACLI01000090.1| 235 26 -1 - 210 FIG00546649: hypothetical protein - none -
fig|6666666.67457.peg.1027 CDS gi|227860968|gb|ACLI01000090.1| 748 1557 1 + 810 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67457.peg.1028 CDS gi|227860968|gb|ACLI01000090.1| 1861 2640 1 + 780 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.67457.peg.1029 CDS gi|227860968|gb|ACLI01000090.1| 2637 3602 3 + 966 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67457.peg.1030 CDS gi|227860968|gb|ACLI01000090.1| 5395 3692 -1 - 1704 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.67457.peg.1031 CDS gi|227860968|gb|ACLI01000090.1| 5845 6540 1 + 696 transcriptional regulator of sugar metabolism - none -
fig|6666666.67457.peg.1032 CDS gi|227860968|gb|ACLI01000090.1| 6537 7511 3 + 975 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67457.peg.1033 CDS gi|227860968|gb|ACLI01000090.1| 7523 9589 2 + 2067 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67457.peg.1034 CDS gi|227860968|gb|ACLI01000090.1| 9743 10012 2 + 270 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization
fig|6666666.67457.peg.1035 CDS gi|227860968|gb|ACLI01000090.1| 10660 10136 -1 - 525 FIG00546412: hypothetical protein - none -
fig|6666666.67457.peg.1036 CDS gi|227860968|gb|ACLI01000090.1| 12144 10855 -3 - 1290 xanthine/uracil permeases - none -
fig|6666666.67457.peg.1037 CDS gi|227860968|gb|ACLI01000090.1| 13855 12248 -1 - 1608 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.67457.peg.1038 CDS gi|227860968|gb|ACLI01000090.1| 14088 14846 3 + 759 FIG00546075: hypothetical protein - none -
fig|6666666.67457.peg.1039 CDS gi|227860968|gb|ACLI01000090.1| 15045 15566 3 + 522 FIG00543926: hypothetical protein - none -
fig|6666666.67457.peg.1040 CDS gi|227860968|gb|ACLI01000090.1| 16459 15608 -1 - 852 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.1041 CDS gi|227860968|gb|ACLI01000090.1| 17397 16492 -3 - 906 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA processing
fig|6666666.67457.peg.1042 CDS gi|227860968|gb|ACLI01000090.1| 18011 17394 -2 - 618 FIG00545147: hypothetical protein - none -
fig|6666666.67457.peg.1043 CDS gi|227860968|gb|ACLI01000090.1| 18220 19584 1 + 1365 ATPase involved in DNA repair - none -
fig|6666666.67457.peg.1044 CDS gi|227860968|gb|ACLI01000090.1| 19596 20687 3 + 1092 No significant database matches - none -
fig|6666666.67457.peg.1045 CDS gi|227860968|gb|ACLI01000090.1| 21373 20684 -1 - 690 FIG00544570: hypothetical protein - none -
fig|6666666.67457.peg.1046 CDS gi|227860968|gb|ACLI01000090.1| 23083 21482 -1 - 1602 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67457.peg.1047 CDS gi|227860968|gb|ACLI01000090.1| 23416 24144 1 + 729 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.67457.peg.1048 CDS gi|227860968|gb|ACLI01000090.1| 24213 25097 3 + 885 glutamate-binding protein GluB - none -
fig|6666666.67457.peg.1049 CDS gi|227860968|gb|ACLI01000090.1| 25148 25897 2 + 750 glutamate ABC-type transporter, permease component - none -
fig|6666666.67457.peg.1050 CDS gi|227860968|gb|ACLI01000090.1| 25897 26847 1 + 951 glutamate transporter permease protein GluD - none -
fig|6666666.67457.peg.1051 CDS gi|227860968|gb|ACLI01000090.1| 27573 26941 -3 - 633 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67457.peg.1052 CDS gi|227860968|gb|ACLI01000090.1| 28767 27607 -3 - 1161 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67457.peg.1053 CDS gi|227860968|gb|ACLI01000090.1| 28798 29268 1 + 471 hypothetical protein - none -
fig|6666666.67457.peg.1054 CDS gi|227860968|gb|ACLI01000090.1| 29320 29943 1 + 624 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67457.peg.1055 CDS gi|227860968|gb|ACLI01000090.1| 30078 30767 3 + 690 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67457.peg.1056 CDS gi|227860968|gb|ACLI01000090.1| 30769 31380 1 + 612 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67457.peg.1057 CDS gi|227860968|gb|ACLI01000090.1| 32291 31491 -2 - 801 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67457.peg.1058 CDS gi|227860968|gb|ACLI01000090.1| 32838 32512 -3 - 327 putative transcription regulator - none -
fig|6666666.67457.peg.1059 CDS gi|227860968|gb|ACLI01000090.1| 33447 32893 -3 - 555 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1060 CDS gi|227860968|gb|ACLI01000090.1| 34014 33460 -3 - 555 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.1061 CDS gi|227860968|gb|ACLI01000090.1| 34172 34465 2 + 294 FIG00544062: hypothetical protein - none -
fig|6666666.67457.peg.1062 CDS gi|227860968|gb|ACLI01000090.1| 35727 34588 -3 - 1140 Integral membrane protein TerC - none -
fig|6666666.67457.peg.1063 CDS gi|227860968|gb|ACLI01000090.1| 38996 36102 -2 - 2895 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.67457.peg.1064 CDS gi|227860968|gb|ACLI01000090.1| 39773 39291 -2 - 483 FIG00544433: hypothetical protein - none -
fig|6666666.67457.peg.1065 CDS gi|227860968|gb|ACLI01000090.1| 42092 39990 -2 - 2103 Ribonuclease J2 (endoribonuclease in RNA processing) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Ribonucleases in Bacillus
fig|6666666.67457.peg.1066 CDS gi|227860968|gb|ACLI01000090.1| 43006 42095 -1 - 912 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67457.peg.1067 CDS gi|227860968|gb|ACLI01000090.1| 43917 43165 -3 - 753 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67457.peg.1068 CDS gi|227860968|gb|ACLI01000090.1| 44723 43977 -2 - 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67457.peg.1069 CDS gi|227860968|gb|ACLI01000090.1| 44904 45596 3 + 693 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.67457.peg.1070 CDS gi|227860968|gb|ACLI01000090.1| 48029 45702 -2 - 2328 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.67457.peg.1071 CDS gi|227860968|gb|ACLI01000090.1| 48489 48220 -3 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.67457.peg.1072 CDS gi|227860968|gb|ACLI01000090.1| 49593 48643 -3 - 951 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.1073 CDS gi|227860968|gb|ACLI01000090.1| 50626 49667 -1 - 960 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67457.peg.1074 CDS gi|227860968|gb|ACLI01000090.1| 50724 51617 3 + 894 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.67457.peg.1075 CDS gi|227860968|gb|ACLI01000090.1| 52284 51628 -3 - 657 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.67457.peg.1076 CDS gi|227860968|gb|ACLI01000090.1| 53098 52274 -1 - 825 putative SimX4 homolog - none -
fig|6666666.67457.peg.1077 CDS gi|227860968|gb|ACLI01000090.1| 54593 53217 -2 - 1377 putative DNA-damage-inducible protein F - none -
fig|6666666.67457.peg.1078 CDS gi|227860968|gb|ACLI01000090.1| 55608 54610 -3 - 999 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67457.peg.1079 CDS gi|227860968|gb|ACLI01000090.1| 56063 55614 -2 - 450 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67457.peg.1080 CDS gi|227860968|gb|ACLI01000090.1| 58676 56283 -2 - 2394 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.67457.peg.1081 CDS gi|227860969|gb|ACLI01000089.1| 224 1147 2 + 924 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.67457.peg.1082 CDS gi|227860969|gb|ACLI01000089.1| 2559 1213 -3 - 1347 FIG00544571: hypothetical protein - none -
fig|6666666.67457.peg.1083 CDS gi|227860969|gb|ACLI01000089.1| 3205 2651 -1 - 555 FIG00545427: hypothetical protein - none -
fig|6666666.67457.peg.1084 CDS gi|227860969|gb|ACLI01000089.1| 5106 3391 -3 - 1716 DNA or RNA helicases of superfamily II - none -
fig|6666666.67457.peg.1085 CDS gi|227860969|gb|ACLI01000089.1| 5354 5103 -2 - 252 FIG00544358: hypothetical protein - none -
fig|6666666.67457.peg.1086 CDS gi|227860969|gb|ACLI01000089.1| 5463 5930 3 + 468 FIG00545207: hypothetical protein - none -
fig|6666666.67457.peg.1087 CDS gi|227860969|gb|ACLI01000089.1| 5980 7467 1 + 1488 Putative transferase - none -
fig|6666666.67457.peg.1088 CDS gi|227860969|gb|ACLI01000089.1| 7517 7915 2 + 399 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67457.peg.1089 CDS gi|227860969|gb|ACLI01000089.1| 8130 9131 3 + 1002 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67457.peg.1090 CDS gi|227860969|gb|ACLI01000089.1| 9590 10282 2 + 693 Iron-dependent repressor IdeR/DtxR - none -
fig|6666666.67457.peg.1091 CDS gi|227860969|gb|ACLI01000089.1| 10282 11268 1 + 987 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67457.peg.1092 CDS gi|227860969|gb|ACLI01000089.1| 12413 11280 -2 - 1134 FIG00544535: hypothetical protein - none -
fig|6666666.67457.peg.1093 CDS gi|227860969|gb|ACLI01000089.1| 12725 13684 2 + 960 FIG00544614: hypothetical protein - none -
fig|6666666.67457.peg.1094 CDS gi|227860969|gb|ACLI01000089.1| 13815 16355 3 + 2541 putative helicase - none -
fig|6666666.67457.peg.1095 CDS gi|227860969|gb|ACLI01000089.1| 16522 17514 1 + 993 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67457.peg.1096 CDS gi|227860969|gb|ACLI01000089.1| 18903 17704 -3 - 1200 FIG00544563: hypothetical protein - none -
fig|6666666.67457.peg.1097 CDS gi|227860969|gb|ACLI01000089.1| 19072 22980 1 + 3909 ATP-dependent helicase HrpA - none -
fig|6666666.67457.peg.1098 CDS gi|227860969|gb|ACLI01000089.1| 23452 22982 -1 - 471 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67457.peg.1099 CDS gi|227860970|gb|ACLI01000088.1| 1293 4 -3 - 1290 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67457.peg.1100 CDS gi|227860970|gb|ACLI01000088.1| 1983 1339 -3 - 645 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67457.peg.1101 CDS gi|227860970|gb|ACLI01000088.1| 2108 2956 2 + 849 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.67457.peg.1102 CDS gi|227860970|gb|ACLI01000088.1| 3396 3737 3 + 342 FIG00543894: hypothetical protein - none -
fig|6666666.67457.peg.1103 CDS gi|227860970|gb|ACLI01000088.1| 6186 3901 -3 - 2286 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67457.peg.1104 CDS gi|227860970|gb|ACLI01000088.1| 6804 6211 -3 - 594 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67457.peg.1105 CDS gi|227860970|gb|ACLI01000088.1| 8388 6808 -3 - 1581 dipeptide-binding protein DciAE - none -
fig|6666666.67457.peg.1106 CDS gi|227860970|gb|ACLI01000088.1| 9676 8540 -1 - 1137 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67457.peg.1107 CDS gi|227860970|gb|ACLI01000088.1| 11554 9680 -1 - 1875 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67457.peg.1108 CDS gi|227860970|gb|ACLI01000088.1| 12356 11943 -2 - 414 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.67457.peg.1109 CDS gi|227860970|gb|ACLI01000088.1| 13498 12407 -1 - 1092 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67457.peg.1110 CDS gi|227860970|gb|ACLI01000088.1| 14134 13520 -1 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67457.peg.1111 CDS gi|227860970|gb|ACLI01000088.1| 14870 14178 -2 - 693 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67457.peg.1112 CDS gi|227860970|gb|ACLI01000088.1| 15719 14961 -2 - 759 FIG000859: hypothetical protein YebC CBSS-1806.1.peg.1285;
Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.67457.peg.1113 CDS gi|227860970|gb|ACLI01000088.1| 15858 15980 3 + 123 hypothetical protein - none -
fig|6666666.67457.peg.1114 CDS gi|227860970|gb|ACLI01000088.1| 16855 15977 -1 - 879 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II;
CBSS-1806.1.peg.1285
fig|6666666.67457.peg.1115 CDS gi|227860970|gb|ACLI01000088.1| 16975 17451 1 + 477 FIG00546244: hypothetical protein - none -
fig|6666666.67457.peg.1116 CDS gi|227860970|gb|ACLI01000088.1| 18421 17528 -1 - 894 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) CBSS-1806.1.peg.1285;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67457.peg.1117 CDS gi|227860970|gb|ACLI01000088.1| 19010 18543 -2 - 468 FIG053954: Probable conserved membrane protein CBSS-1806.1.peg.1285
fig|6666666.67457.peg.1118 CDS gi|227860970|gb|ACLI01000088.1| 20101 19007 -1 - 1095 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) CBSS-1806.1.peg.1285
fig|6666666.67457.peg.1119 CDS gi|227860970|gb|ACLI01000088.1| 21038 20106 -2 - 933 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) CBSS-1806.1.peg.1285
fig|6666666.67457.peg.1120 CDS gi|227860970|gb|ACLI01000088.1| 21754 21068 -1 - 687 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.1121 CDS gi|227860970|gb|ACLI01000088.1| 22449 21754 -3 - 696 FIG049476: HIT family protein CBSS-1806.1.peg.1285
fig|6666666.67457.peg.1122 CDS gi|227860970|gb|ACLI01000088.1| 24490 22433 -1 - 2058 Threonyl-tRNA synthetase (EC 6.1.1.3) CBSS-1806.1.peg.1285;
tRNA aminoacylation, Thr
fig|6666666.67457.peg.1123 CDS gi|227860970|gb|ACLI01000088.1| 24467 24643 2 + 177 hypothetical protein - none -
fig|6666666.67457.peg.1124 CDS gi|227860970|gb|ACLI01000088.1| 25920 24685 -3 - 1236 Dyp-type peroxidase family protein - none -
fig|6666666.67457.peg.1125 CDS gi|227860970|gb|ACLI01000088.1| 26568 25951 -3 - 618 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67457.peg.1126 CDS gi|227860970|gb|ACLI01000088.1| 27126 26581 -3 - 546 FIG00543909: hypothetical protein - none -
fig|6666666.67457.peg.1127 CDS gi|227860970|gb|ACLI01000088.1| 28790 29497 2 + 708 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.67457.peg.1128 CDS gi|227860970|gb|ACLI01000088.1| 29653 30957 1 + 1305 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67457.peg.1129 CDS gi|227860970|gb|ACLI01000088.1| 31000 31413 1 + 414 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67457.peg.1130 CDS gi|227860970|gb|ACLI01000088.1| 32217 31516 -3 - 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.1131 CDS gi|227860970|gb|ACLI01000088.1| 32650 33267 1 + 618 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67457.peg.1132 CDS gi|227860970|gb|ACLI01000088.1| 33286 34509 1 + 1224 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.67457.peg.1133 CDS gi|227860970|gb|ACLI01000088.1| 36416 34506 -2 - 1911 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67457.peg.1134 CDS gi|227860970|gb|ACLI01000088.1| 37892 36627 -2 - 1266 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67457.peg.1135 CDS gi|227860970|gb|ACLI01000088.1| 38866 38042 -1 - 825 FIG00545882: hypothetical protein - none -
fig|6666666.67457.peg.1136 CDS gi|227860970|gb|ACLI01000088.1| 39549 39082 -3 - 468 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67457.peg.1137 CDS gi|227860970|gb|ACLI01000088.1| 39633 40184 3 + 552 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1138 CDS gi|227860970|gb|ACLI01000088.1| 40654 40364 -1 - 291 FIG00545109: hypothetical protein - none -
fig|6666666.67457.peg.1139 CDS gi|227860970|gb|ACLI01000088.1| 41689 40820 -1 - 870 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67457.peg.1140 CDS gi|227860970|gb|ACLI01000088.1| 41752 42561 1 + 810 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67457.peg.1141 CDS gi|227860971|gb|ACLI01000087.1| 827 162 -2 - 666 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1142 CDS gi|227860971|gb|ACLI01000087.1| 2325 853 -3 - 1473 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) RNA methylation
fig|6666666.67457.peg.1143 CDS gi|227860971|gb|ACLI01000087.1| 3269 2322 -2 - 948 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67457.peg.1144 CDS gi|227860971|gb|ACLI01000087.1| 3791 3282 -2 - 510 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Translation termination factors bacterial
fig|6666666.67457.peg.1145 CDS gi|227860971|gb|ACLI01000087.1| 4040 5299 2 + 1260 hypothetical protein - none -
fig|6666666.67457.peg.1146 CDS gi|227860971|gb|ACLI01000087.1| 7342 5321 -1 - 2022 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67457.peg.1147 CDS gi|227860971|gb|ACLI01000087.1| 8626 7403 -1 - 1224 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67457.peg.1148 CDS gi|227860971|gb|ACLI01000087.1| 10003 8729 -1 - 1275 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67457.peg.1149 CDS gi|227860971|gb|ACLI01000087.1| 10456 10169 -1 - 288 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67457.peg.1150 CDS gi|227860971|gb|ACLI01000087.1| 11048 10545 -2 - 504 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67457.peg.1151 CDS gi|227860971|gb|ACLI01000087.1| 11444 11124 -2 - 321 integration host factor - none -
fig|6666666.67457.peg.1152 CDS gi|227860971|gb|ACLI01000087.1| 12492 11650 -3 - 843 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1153 CDS gi|227860971|gb|ACLI01000087.1| 15839 12498 -2 - 3342 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67457.peg.1154 CDS gi|227860971|gb|ACLI01000087.1| 17047 15845 -1 - 1203 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67457.peg.1155 CDS gi|227860971|gb|ACLI01000087.1| 18477 17125 -3 - 1353 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67457.peg.1156 CDS gi|227860971|gb|ACLI01000087.1| 19468 18530 -1 - 939 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67457.peg.1157 CDS gi|227860971|gb|ACLI01000087.1| 20025 19468 -3 - 558 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67457.peg.1158 CDS gi|227860971|gb|ACLI01000087.1| 20266 21789 1 + 1524 Cell division inhibitor Persister Cells
fig|6666666.67457.peg.1159 CDS gi|227860971|gb|ACLI01000087.1| 21855 22328 3 + 474 FIG00544983: hypothetical protein - none -
fig|6666666.67457.peg.1160 CDS gi|227860971|gb|ACLI01000087.1| 22315 22767 1 + 453 FIG00546283: hypothetical protein - none -
fig|6666666.67457.peg.1161 CDS gi|227860971|gb|ACLI01000087.1| 23337 22834 -3 - 504 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67457.peg.1162 CDS gi|227860971|gb|ACLI01000087.1| 24026 23463 -2 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67457.peg.1163 CDS gi|227860971|gb|ACLI01000087.1| 25215 24124 -3 - 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67457.peg.1164 CDS gi|227860971|gb|ACLI01000087.1| 25779 25342 -3 - 438 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67457.peg.1165 CDS gi|227860971|gb|ACLI01000087.1| 26899 25808 -1 - 1092 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.1166 CDS gi|227860971|gb|ACLI01000087.1| 27447 26929 -3 - 519 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.1167 CDS gi|227860971|gb|ACLI01000087.1| 28654 27440 -1 - 1215 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.1168 CDS gi|227860971|gb|ACLI01000087.1| 29188 28748 -1 - 441 signal peptidase - none -
fig|6666666.67457.peg.1169 CDS gi|227860971|gb|ACLI01000087.1| 30073 29243 -1 - 831 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.1170 CDS gi|227860971|gb|ACLI01000087.1| 31218 30082 -3 - 1137 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67457.peg.1171 CDS gi|227860971|gb|ACLI01000087.1| 31814 31269 -2 - 546 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.67457.peg.1172 CDS gi|227860971|gb|ACLI01000087.1| 34684 32012 -1 - 2673 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67457.peg.1173 CDS gi|227860971|gb|ACLI01000087.1| 36151 34802 -1 - 1350 ATPase, AAA family - none -
fig|6666666.67457.peg.1174 CDS gi|227860971|gb|ACLI01000087.1| 37361 36171 -2 - 1191 FIG00544116: hypothetical protein - none -
fig|6666666.67457.peg.1175 CDS gi|227860971|gb|ACLI01000087.1| 39444 37642 -3 - 1803 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67457.peg.1176 CDS gi|227860971|gb|ACLI01000087.1| 39663 40544 3 + 882 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67457.peg.1177 CDS gi|227860971|gb|ACLI01000087.1| 43201 40541 -1 - 2661 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.67457.peg.1178 CDS gi|227860971|gb|ACLI01000087.1| 43441 43761 1 + 321 hypothetical protein - none -
fig|6666666.67457.peg.1179 CDS gi|227860971|gb|ACLI01000087.1| 43765 45012 1 + 1248 putative tyrosinase - none -
fig|6666666.67457.peg.1180 CDS gi|227860971|gb|ACLI01000087.1| 45104 45832 2 + 729 Putative CBS domain containing protein - none -
fig|6666666.67457.peg.1181 CDS gi|227860971|gb|ACLI01000087.1| 45903 47024 3 + 1122 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67457.peg.1182 CDS gi|227860971|gb|ACLI01000087.1| 47047 47724 1 + 678 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.67457.peg.1183 CDS gi|227860972|gb|ACLI01000086.1| 870 676 -3 - 195 FIG00546949: hypothetical protein - none -
fig|6666666.67457.peg.1184 CDS gi|227860972|gb|ACLI01000086.1| 980 1264 2 + 285 ACT domain protein - none -
fig|6666666.67457.peg.1185 CDS gi|227860972|gb|ACLI01000086.1| 1335 2768 3 + 1434 FIG00848225: hypothetical protein - none -
fig|6666666.67457.peg.1186 CDS gi|227860972|gb|ACLI01000086.1| 2875 5571 1 + 2697 Ca ion P-type ATPase - none -
fig|6666666.67457.peg.1187 CDS gi|227860972|gb|ACLI01000086.1| 6081 5575 -3 - 507 FIG00549336: hypothetical protein - none -
fig|6666666.67457.peg.1188 CDS gi|227860972|gb|ACLI01000086.1| 6358 6182 -1 - 177 hypothetical protein - none -
fig|6666666.67457.peg.1189 CDS gi|227860972|gb|ACLI01000086.1| 6571 6924 1 + 354 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67457.peg.1190 CDS gi|227860972|gb|ACLI01000086.1| 6884 7135 2 + 252 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67457.peg.1191 CDS gi|227860972|gb|ACLI01000086.1| 7719 7156 -3 - 564 FIG00544509: hypothetical protein - none -
fig|6666666.67457.peg.1192 CDS gi|227860972|gb|ACLI01000086.1| 7997 7716 -2 - 282 hypothetical protein - none -
fig|6666666.67457.peg.1193 CDS gi|227860972|gb|ACLI01000086.1| 8212 8054 -1 - 159 hypothetical protein - none -
fig|6666666.67457.peg.1194 CDS gi|227860972|gb|ACLI01000086.1| 10237 8606 -1 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.1195 CDS gi|227860972|gb|ACLI01000086.1| 10390 10995 1 + 606 FIG00546830: hypothetical protein - none -
fig|6666666.67457.peg.1196 CDS gi|227860972|gb|ACLI01000086.1| 11013 12302 3 + 1290 FIG00546472: hypothetical protein - none -
fig|6666666.67457.peg.1197 CDS gi|227860972|gb|ACLI01000086.1| 12783 12373 -3 - 411 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67457.peg.1198 CDS gi|227860972|gb|ACLI01000086.1| 13211 12780 -2 - 432 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67457.peg.1199 CDS gi|227860972|gb|ACLI01000086.1| 14491 13223 -1 - 1269 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67457.peg.1200 CDS gi|227860972|gb|ACLI01000086.1| 15252 14494 -3 - 759 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67457.peg.1201 CDS gi|227860972|gb|ACLI01000086.1| 16522 15338 -1 - 1185 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67457.peg.1202 CDS gi|227860972|gb|ACLI01000086.1| 17934 16528 -3 - 1407 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67457.peg.1203 CDS gi|227860972|gb|ACLI01000086.1| 18677 17970 -2 - 708 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67457.peg.1204 CDS gi|227860972|gb|ACLI01000086.1| 19013 20773 2 + 1761 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1205 CDS gi|227860972|gb|ACLI01000086.1| 20780 21793 2 + 1014 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67457.peg.1206 CDS gi|227860972|gb|ACLI01000086.1| 21803 22591 2 + 789 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67457.peg.1207 CDS gi|227860972|gb|ACLI01000086.1| 22764 23765 3 + 1002 Cytochrome oxidase assembly protein - none -
fig|6666666.67457.peg.1208 CDS gi|227860972|gb|ACLI01000086.1| 23827 24795 1 + 969 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67457.peg.1209 CDS gi|227860972|gb|ACLI01000086.1| 25804 24872 -1 - 933 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67457.peg.1210 CDS gi|227860972|gb|ACLI01000086.1| 26545 28638 1 + 2094 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67457.peg.1211 CDS gi|227860972|gb|ACLI01000086.1| 28764 29846 3 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.67457.peg.1212 CDS gi|227860972|gb|ACLI01000086.1| 29958 31502 3 + 1545 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67457.peg.1213 CDS gi|227860972|gb|ACLI01000086.1| 31519 32484 1 + 966 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67457.peg.1214 CDS gi|227860972|gb|ACLI01000086.1| 32493 33227 3 + 735 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67457.peg.1215 CDS gi|227860972|gb|ACLI01000086.1| 34363 33236 -1 - 1128 sarcosine oxidase( EC:1.5.3.1 ) - none -
fig|6666666.67457.peg.1216 CDS gi|227860972|gb|ACLI01000086.1| 35569 34448 -1 - 1122 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67457.peg.1217 CDS gi|227860972|gb|ACLI01000086.1| 36831 35566 -3 - 1266 Ammonium transporter Ammonia assimilation
fig|6666666.67457.peg.1218 CDS gi|227860972|gb|ACLI01000086.1| 37295 37062 -2 - 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67457.peg.1219 CDS gi|227860972|gb|ACLI01000086.1| 40162 37403 -1 - 2760 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67457.peg.1220 CDS gi|227860972|gb|ACLI01000086.1| 41035 40256 -1 - 780 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.1221 CDS gi|227860972|gb|ACLI01000086.1| 42304 41087 -1 - 1218 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.1222 CDS gi|227860972|gb|ACLI01000086.1| 43537 42533 -1 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67457.peg.1223 CDS gi|227860972|gb|ACLI01000086.1| 44998 44015 -1 - 984 FIG001886: Cytoplasmic hypothetical protein Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67457.peg.1224 CDS gi|227860972|gb|ACLI01000086.1| 46168 45098 -1 - 1071 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67457.peg.1225 CDS gi|227860972|gb|ACLI01000086.1| 47019 46186 -3 - 834 FIG000506: Predicted P-loop-containing kinase Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67457.peg.1226 CDS gi|227860972|gb|ACLI01000086.1| 49212 47167 -3 - 2046 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67457.peg.1227 CDS gi|227860972|gb|ACLI01000086.1| 49766 49221 -2 - 546 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67457.peg.1228 CDS gi|227860972|gb|ACLI01000086.1| 50343 49864 -3 - 480 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1229 CDS gi|227860972|gb|ACLI01000086.1| 51093 50353 -3 - 741 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67457.peg.1230 CDS gi|227860973|gb|ACLI01000085.1| 1999 1490 -1 - 510 FIG00545300: hypothetical protein - none -
fig|6666666.67457.peg.1231 CDS gi|227860973|gb|ACLI01000085.1| 2402 5215 2 + 2814 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67457.peg.1232 CDS gi|227860973|gb|ACLI01000085.1| 5384 5226 -2 - 159 hypothetical protein - none -
fig|6666666.67457.peg.1233 CDS gi|227860973|gb|ACLI01000085.1| 5420 5986 2 + 567 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.1234 CDS gi|227860974|gb|ACLI01000084.1| 840 1604 3 + 765 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.67457.peg.1235 CDS gi|227860974|gb|ACLI01000084.1| 1646 2266 2 + 621 FIG00545282: hypothetical protein - none -
fig|6666666.67457.peg.1236 CDS gi|227860974|gb|ACLI01000084.1| 3562 2276 -1 - 1287 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67457.peg.1237 CDS gi|227860974|gb|ACLI01000084.1| 3660 3538 -3 - 123 hypothetical protein - none -
fig|6666666.67457.peg.1238 CDS gi|227860974|gb|ACLI01000084.1| 4040 3645 -2 - 396 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.67457.peg.1239 CDS gi|227860974|gb|ACLI01000084.1| 4991 4146 -2 - 846 FIG00544636: hypothetical protein - none -
fig|6666666.67457.peg.1240 CDS gi|227860974|gb|ACLI01000084.1| 5037 5813 3 + 777 FIG00546138: hypothetical protein - none -
fig|6666666.67457.peg.1241 CDS gi|227860974|gb|ACLI01000084.1| 6960 5827 -3 - 1134 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67457.peg.1242 CDS gi|227860974|gb|ACLI01000084.1| 7768 7034 -1 - 735 cell wall-associated hydrolase - none -
fig|6666666.67457.peg.1243 CDS gi|227860975|gb|ACLI01000083.1| 2268 853 -3 - 1416 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1244 CDS gi|227860975|gb|ACLI01000083.1| 2659 3960 1 + 1302 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67457.peg.1245 CDS gi|227860975|gb|ACLI01000083.1| 5297 3972 -2 - 1326 putative transport protein - none -
fig|6666666.67457.peg.1246 CDS gi|227860975|gb|ACLI01000083.1| 6051 5575 -3 - 477 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.67457.peg.1247 CDS gi|227860975|gb|ACLI01000083.1| 6320 6892 2 + 573 FIG00545814: hypothetical protein - none -
fig|6666666.67457.peg.1248 CDS gi|227860975|gb|ACLI01000083.1| 6906 7865 3 + 960 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67457.peg.1249 CDS gi|227860975|gb|ACLI01000083.1| 9192 7846 -3 - 1347 hypothetical protein - none -
fig|6666666.67457.peg.1250 CDS gi|227860975|gb|ACLI01000083.1| 9216 9362 3 + 147 hypothetical protein - none -
fig|6666666.67457.peg.1251 CDS gi|227860975|gb|ACLI01000083.1| 11519 9735 -2 - 1785 hypothetical protein - none -
fig|6666666.67457.peg.1252 CDS gi|227860975|gb|ACLI01000083.1| 12064 12741 1 + 678 FIG00547576: hypothetical protein - none -
fig|6666666.67457.peg.1253 CDS gi|227860975|gb|ACLI01000083.1| 13793 13608 -2 - 186 FIG00546418: hypothetical protein - none -
fig|6666666.67457.peg.1254 CDS gi|227860975|gb|ACLI01000083.1| 14595 13795 -3 - 801 Putative secreted protein - none -
fig|6666666.67457.peg.1255 CDS gi|227860975|gb|ACLI01000083.1| 14774 14592 -2 - 183 hypothetical protein - none -
fig|6666666.67457.peg.1256 CDS gi|227860975|gb|ACLI01000083.1| 15225 15587 3 + 363 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67457.peg.1257 CDS gi|227860975|gb|ACLI01000083.1| 16469 15687 -2 - 783 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67457.peg.1258 CDS gi|227860975|gb|ACLI01000083.1| 18231 16561 -3 - 1671 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67457.peg.1259 CDS gi|227860975|gb|ACLI01000083.1| 18821 18228 -2 - 594 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67457.peg.1260 CDS gi|227860975|gb|ACLI01000083.1| 20218 18866 -1 - 1353 FIG00544398: hypothetical protein - none -
fig|6666666.67457.peg.1261 CDS gi|227860975|gb|ACLI01000083.1| 20257 21063 1 + 807 Cobalamin biosynthesis protein CobG - none -
fig|6666666.67457.peg.1262 CDS gi|227860975|gb|ACLI01000083.1| 22576 21197 -1 - 1380 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.67457.peg.1263 CDS gi|227860975|gb|ACLI01000083.1| 23363 22623 -2 - 741 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67457.peg.1264 CDS gi|227860975|gb|ACLI01000083.1| 24514 23360 -1 - 1155 probable metallopeptidase - none -
fig|6666666.67457.peg.1265 CDS gi|227860975|gb|ACLI01000083.1| 24535 25215 1 + 681 FIG00545318: hypothetical protein - none -
fig|6666666.67457.peg.1266 CDS gi|227860975|gb|ACLI01000083.1| 25226 25384 2 + 159 hypothetical protein - none -
fig|6666666.67457.peg.1267 CDS gi|227860975|gb|ACLI01000083.1| 25531 25737 1 + 207 hypothetical protein - none -
fig|6666666.67457.peg.1268 CDS gi|227860975|gb|ACLI01000083.1| 28620 25798 -3 - 2823 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67457.peg.1269 CDS gi|227860975|gb|ACLI01000083.1| 29580 28645 -3 - 936 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67457.peg.1270 CDS gi|227860975|gb|ACLI01000083.1| 30104 29793 -2 - 312 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67457.peg.1271 CDS gi|227860975|gb|ACLI01000083.1| 31216 30224 -1 - 993 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67457.peg.1272 CDS gi|227860975|gb|ACLI01000083.1| 32201 31221 -2 - 981 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67457.peg.1273 CDS gi|227860975|gb|ACLI01000083.1| 33690 32221 -3 - 1470 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67457.peg.1274 CDS gi|227860975|gb|ACLI01000083.1| 33887 33696 -2 - 192 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67457.peg.1275 CDS gi|227860975|gb|ACLI01000083.1| 35537 33993 -2 - 1545 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67457.peg.1276 CDS gi|227860975|gb|ACLI01000083.1| 37393 35813 -1 - 1581 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67457.peg.1277 CDS gi|227860975|gb|ACLI01000083.1| 38271 37435 -3 - 837 RNA methyltransferase - none -
fig|6666666.67457.peg.1278 CDS gi|227860975|gb|ACLI01000083.1| 39588 38326 -3 - 1263 aspartyl aminopeptidase - none -
fig|6666666.67457.peg.1279 CDS gi|227860975|gb|ACLI01000083.1| 39668 40531 2 + 864 RecB family exonuclease - none -
fig|6666666.67457.peg.1280 CDS gi|227860975|gb|ACLI01000083.1| 40753 40992 1 + 240 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.67457.peg.1281 CDS gi|227860975|gb|ACLI01000083.1| 42243 41047 -3 - 1197 FIG00544406: hypothetical protein - none -
fig|6666666.67457.peg.1282 CDS gi|227860975|gb|ACLI01000083.1| 42387 42872 3 + 486 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.1283 CDS gi|227860975|gb|ACLI01000083.1| 44469 42874 -3 - 1596 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67457.peg.1284 CDS gi|227860975|gb|ACLI01000083.1| 45502 44657 -1 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1285 CDS gi|227860975|gb|ACLI01000083.1| 45700 45518 -1 - 183 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1286 CDS gi|227860975|gb|ACLI01000083.1| 45683 45844 2 + 162 hypothetical protein - none -
fig|6666666.67457.peg.1287 CDS gi|227860975|gb|ACLI01000083.1| 46536 45841 -3 - 696 HAD-superfamily hydrolase, subfamily IA, variant 3 - none -
fig|6666666.67457.peg.1288 CDS gi|227860975|gb|ACLI01000083.1| 50223 46582 -3 - 3642 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.67457.peg.1289 CDS gi|227860975|gb|ACLI01000083.1| 50772 50392 -3 - 381 FIG00543988: hypothetical protein - none -
fig|6666666.67457.peg.1290 CDS gi|227860975|gb|ACLI01000083.1| 52088 50796 -2 - 1293 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67457.peg.1291 CDS gi|227860975|gb|ACLI01000083.1| 53156 52275 -2 - 882 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67457.peg.1292 CDS gi|227860975|gb|ACLI01000083.1| 53212 54150 1 + 939 putative oxidoreductase - none -
fig|6666666.67457.peg.1293 CDS gi|227860975|gb|ACLI01000083.1| 54188 55210 2 + 1023 FIG00545923: hypothetical protein - none -
fig|6666666.67457.peg.1294 CDS gi|227860975|gb|ACLI01000083.1| 55257 56390 3 + 1134 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67457.peg.1295 CDS gi|227860975|gb|ACLI01000083.1| 56899 56474 -1 - 426 FIG00543853: hypothetical protein - none -
fig|6666666.67457.peg.1296 CDS gi|227860975|gb|ACLI01000083.1| 57449 56916 -2 - 534 Phospholipid-binding protein - none -
fig|6666666.67457.peg.1297 CDS gi|227860975|gb|ACLI01000083.1| 59332 57494 -1 - 1839 ABC transporter TetB - none -
fig|6666666.67457.peg.1298 CDS gi|227860975|gb|ACLI01000083.1| 60987 59329 -3 - 1659 FIG00544414: hypothetical protein - none -
fig|6666666.67457.peg.1299 CDS gi|227860975|gb|ACLI01000083.1| 61525 62169 1 + 645 FIG00544509: hypothetical protein - none -
fig|6666666.67457.peg.1300 CDS gi|227860975|gb|ACLI01000083.1| 63334 62243 -1 - 1092 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67457.peg.1301 CDS gi|227860975|gb|ACLI01000083.1| 65546 63327 -2 - 2220 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67457.peg.1302 CDS gi|227860975|gb|ACLI01000083.1| 66823 65555 -1 - 1269 Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67457.peg.1303 CDS gi|227860976|gb|ACLI01000082.1| 1854 391 -3 - 1464 Putative secreted protein - none -
fig|6666666.67457.peg.1304 CDS gi|227860976|gb|ACLI01000082.1| 2777 1881 -2 - 897 FIG00545058: hypothetical protein - none -
fig|6666666.67457.peg.1305 CDS gi|227860976|gb|ACLI01000082.1| 3838 2777 -1 - 1062 FIG00546228: hypothetical protein - none -
fig|6666666.67457.peg.1306 CDS gi|227860976|gb|ACLI01000082.1| 5217 3835 -3 - 1383 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67457.peg.1307 CDS gi|227860976|gb|ACLI01000082.1| 6663 5281 -3 - 1383 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67457.peg.1308 CDS gi|227860976|gb|ACLI01000082.1| 8219 6738 -2 - 1482 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67457.peg.1309 CDS gi|227860976|gb|ACLI01000082.1| 9847 8381 -1 - 1467 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67457.peg.1310 CDS gi|227860976|gb|ACLI01000082.1| 9949 10404 1 + 456 FIG00544657: hypothetical protein - none -
fig|6666666.67457.peg.1311 CDS gi|227860976|gb|ACLI01000082.1| 10473 11072 3 + 600 FIG00544791: hypothetical protein - none -
fig|6666666.67457.peg.1312 CDS gi|227860976|gb|ACLI01000082.1| 13298 11079 -2 - 2220 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
5-FCL-like protein;
5-FCL-like protein;
Thiamin biosynthesis;
Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.67457.peg.1313 CDS gi|227860977|gb|ACLI01000081.1| 411 2045 3 + 1635 Arylsulfatase (EC 3.1.6.1) Galactosylceramide and Sulfatide metabolism;
Sulfatases and sulfatase modifying factor 1
fig|6666666.67457.peg.1314 CDS gi|227860977|gb|ACLI01000081.1| 2248 2114 -1 - 135 hypothetical protein - none -
fig|6666666.67457.peg.1315 CDS gi|227860977|gb|ACLI01000081.1| 2423 3010 2 + 588 Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1) Sulfatases and sulfatase modifying factor 1
fig|6666666.67457.peg.1316 CDS gi|227860977|gb|ACLI01000081.1| 3713 3321 -2 - 393 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.67457.peg.1317 CDS gi|227860977|gb|ACLI01000081.1| 4927 3740 -1 - 1188 hydrolase of the alpha/beta superfamily - none -
fig|6666666.67457.peg.1318 CDS gi|227860977|gb|ACLI01000081.1| 5138 7429 2 + 2292 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67457.peg.1319 CDS gi|227860977|gb|ACLI01000081.1| 7567 7995 1 + 429 FIG00672531: hypothetical protein - none -
fig|6666666.67457.peg.1320 CDS gi|227860977|gb|ACLI01000081.1| 8157 8939 3 + 783 FIG00545122: hypothetical protein - none -
fig|6666666.67457.peg.1321 CDS gi|227860977|gb|ACLI01000081.1| 8941 9549 1 + 609 FIG00544095: hypothetical protein - none -
fig|6666666.67457.peg.1322 CDS gi|227860977|gb|ACLI01000081.1| 9714 10295 3 + 582 FIG00544641: hypothetical protein - none -
fig|6666666.67457.peg.1323 CDS gi|227860977|gb|ACLI01000081.1| 10408 10292 -1 - 117 hypothetical protein - none -
fig|6666666.67457.peg.1324 CDS gi|227860977|gb|ACLI01000081.1| 11522 10386 -2 - 1137 FIG00547721: hypothetical protein - none -
fig|6666666.67457.peg.1325 CDS gi|227860977|gb|ACLI01000081.1| 12867 11590 -3 - 1278 Uncharacterized protein Rv3292/MT3391 - none -
fig|6666666.67457.peg.1326 CDS gi|227860977|gb|ACLI01000081.1| 13693 12836 -1 - 858 glutamate-binding protein GluB - none -
fig|6666666.67457.peg.1327 CDS gi|227860978|gb|ACLI01000080.1| 21 1163 3 + 1143 ABC-type transport system ATPase component - none -
fig|6666666.67457.peg.1328 CDS gi|227860979|gb|ACLI01000079.1| 119 1354 2 + 1236 TPR-repeat-containing protein - none -
fig|6666666.67457.peg.1329 CDS gi|227860979|gb|ACLI01000079.1| 1366 2361 1 + 996 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67457.peg.1330 CDS gi|227860979|gb|ACLI01000079.1| 2358 2546 3 + 189 FIG00545954: hypothetical protein - none -
fig|6666666.67457.peg.1331 CDS gi|227860979|gb|ACLI01000079.1| 2623 3447 1 + 825 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67457.peg.1332 CDS gi|227860979|gb|ACLI01000079.1| 3444 4400 3 + 957 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67457.peg.1333 CDS gi|227860979|gb|ACLI01000079.1| 4547 6337 2 + 1791 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67457.peg.1334 CDS gi|227860979|gb|ACLI01000079.1| 6499 7605 1 + 1107 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67457.peg.1335 CDS gi|227860979|gb|ACLI01000079.1| 7624 8607 1 + 984 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67457.peg.1336 CDS gi|227860979|gb|ACLI01000079.1| 8874 8731 -3 - 144 hypothetical protein - none -
fig|6666666.67457.peg.1337 CDS gi|227860979|gb|ACLI01000079.1| 8911 10590 1 + 1680 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.67457.peg.1338 CDS gi|227860979|gb|ACLI01000079.1| 10630 11289 1 + 660 ADP-ribose pyrophosphatase (EC 3.6.1.13) NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67457.peg.1339 CDS gi|227860979|gb|ACLI01000079.1| 11286 12200 3 + 915 Tyrosine recombinase XerD - none -
fig|6666666.67457.peg.1340 CDS gi|227860979|gb|ACLI01000079.1| 12530 13405 2 + 876 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67457.peg.1341 CDS gi|227860979|gb|ACLI01000079.1| 13383 14207 3 + 825 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67457.peg.1342 CDS gi|227860979|gb|ACLI01000079.1| 14839 14258 -1 - 582 FIG00546511: hypothetical protein - none -
fig|6666666.67457.peg.1343 CDS gi|227860979|gb|ACLI01000079.1| 15144 16001 3 + 858 Rhodanese-related sulfurtransferase - none -
fig|6666666.67457.peg.1344 CDS gi|227860979|gb|ACLI01000079.1| 16034 16597 2 + 564 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67457.peg.1345 CDS gi|227860979|gb|ACLI01000079.1| 16697 17686 2 + 990 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67457.peg.1346 CDS gi|227860979|gb|ACLI01000079.1| 17683 18393 1 + 711 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.67457.peg.1347 CDS gi|227860979|gb|ACLI01000079.1| 18390 20048 3 + 1659 GTP-binding protein EngA Universal GTPases
fig|6666666.67457.peg.1348 CDS gi|227860979|gb|ACLI01000079.1| 20740 20222 -1 - 519 FIG00545269: hypothetical protein - none -
fig|6666666.67457.peg.1349 CDS gi|227860979|gb|ACLI01000079.1| 21578 20772 -2 - 807 FIG00545160: hypothetical protein - none -
fig|6666666.67457.peg.1350 CDS gi|227860979|gb|ACLI01000079.1| 21799 21653 -1 - 147 hypothetical protein - none -
fig|6666666.67457.peg.1351 CDS gi|227860979|gb|ACLI01000079.1| 21767 23275 2 + 1509 putative ABC transporter permease protein - none -
fig|6666666.67457.peg.1352 CDS gi|227860980|gb|ACLI01000078.1| 83 685 2 + 603 Mobile element protein - none -
fig|6666666.67457.peg.1353 CDS gi|227860980|gb|ACLI01000078.1| 1515 1670 3 + 156 hypothetical protein - none -
fig|6666666.67457.peg.1354 CDS gi|227860981|gb|ACLI01000077.1| 580 11 -1 - 570 Mobile element protein - none -
fig|6666666.67457.peg.1355 CDS gi|227860982|gb|ACLI01000076.1| 4 525 1 + 522 FIG00543838: hypothetical protein - none -
fig|6666666.67457.peg.1356 CDS gi|227860982|gb|ACLI01000076.1| 537 1367 3 + 831 glutamine cyclotransferase - none -
fig|6666666.67457.peg.1357 CDS gi|227860982|gb|ACLI01000076.1| 1383 1910 3 + 528 FIG00545981: hypothetical protein - none -
fig|6666666.67457.peg.1358 CDS gi|227860982|gb|ACLI01000076.1| 2434 2066 -1 - 369 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67457.peg.1359 CDS gi|227860982|gb|ACLI01000076.1| 2978 3562 2 + 585 FIG00996461: hypothetical protein - none -
fig|6666666.67457.peg.1360 CDS gi|227860982|gb|ACLI01000076.1| 4012 6243 1 + 2232 FIG00545438: hypothetical protein - none -
fig|6666666.67457.peg.1361 CDS gi|227860982|gb|ACLI01000076.1| 6296 7969 2 + 1674 DNA repair helicase - none -
fig|6666666.67457.peg.1362 CDS gi|227860982|gb|ACLI01000076.1| 7970 8611 2 + 642 FIG00546748: hypothetical protein - none -
fig|6666666.67457.peg.1363 CDS gi|227860982|gb|ACLI01000076.1| 9866 8703 -2 - 1164 PLP-dependent aminotransferase - none -
fig|6666666.67457.peg.1364 CDS gi|227860983|gb|ACLI01000075.1| 30 317 3 + 288 FIG00544583: hypothetical protein - none -
fig|6666666.67457.peg.1365 CDS gi|227860983|gb|ACLI01000075.1| 1172 336 -2 - 837 putative rRNA methylase - none -
fig|6666666.67457.peg.1366 CDS gi|227860983|gb|ACLI01000075.1| 2635 1175 -1 - 1461 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67457.peg.1367 CDS gi|227860984|gb|ACLI01000074.1| 251 1438 2 + 1188 FIG00545265: hypothetical protein - none -
fig|6666666.67457.peg.1368 CDS gi|227860984|gb|ACLI01000074.1| 10580 1662 -2 - 8919 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67457.peg.1369 CDS gi|227860984|gb|ACLI01000074.1| 10883 11734 2 + 852 Putative secreted protein - none -
fig|6666666.67457.peg.1370 CDS gi|227860984|gb|ACLI01000074.1| 12623 11814 -2 - 810 FIG00544899: hypothetical protein - none -
fig|6666666.67457.peg.1371 CDS gi|227860984|gb|ACLI01000074.1| 14387 12732 -2 - 1656 putative transport protein - none -
fig|6666666.67457.peg.1372 CDS gi|227860984|gb|ACLI01000074.1| 14735 14394 -2 - 342 FIG00544151: hypothetical protein - none -
fig|6666666.67457.peg.1373 CDS gi|227860984|gb|ACLI01000074.1| 16012 15128 -1 - 885 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67457.peg.1374 CDS gi|227860984|gb|ACLI01000074.1| 16006 17547 1 + 1542 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67457.peg.1375 CDS gi|227860984|gb|ACLI01000074.1| 17900 17544 -2 - 357 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67457.peg.1376 CDS gi|227860984|gb|ACLI01000074.1| 19321 18083 -1 - 1239 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67457.peg.1377 CDS gi|227860984|gb|ACLI01000074.1| 19343 19615 2 + 273 hypothetical protein - none -
fig|6666666.67457.peg.1378 CDS gi|227860984|gb|ACLI01000074.1| 20140 21270 1 + 1131 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.1379 CDS gi|227860984|gb|ACLI01000074.1| 21423 22475 3 + 1053 FIG00545091: hypothetical protein - none -
fig|6666666.67457.peg.1380 CDS gi|227860985|gb|ACLI01000073.1| 37 426 1 + 390 hypothetical protein - none -
fig|6666666.67457.peg.1381 CDS gi|227860985|gb|ACLI01000073.1| 1808 591 -2 - 1218 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.67457.peg.1382 CDS gi|227860985|gb|ACLI01000073.1| 2720 2097 -2 - 624 putative two-component response regulator - none -
fig|6666666.67457.peg.1383 CDS gi|227860985|gb|ACLI01000073.1| 3847 2717 -1 - 1131 sensor histidine kinase - none -
fig|6666666.67457.peg.1384 CDS gi|227860985|gb|ACLI01000073.1| 4784 3933 -2 - 852 integral membrane protein - none -
fig|6666666.67457.peg.1385 CDS gi|227860985|gb|ACLI01000073.1| 5787 4810 -3 - 978 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.1386 CDS gi|227860985|gb|ACLI01000073.1| 7529 5922 -2 - 1608 Multicopper oxidase Copper homeostasis
fig|6666666.67457.peg.1387 CDS gi|227860985|gb|ACLI01000073.1| 7591 8868 1 + 1278 Putative membrane protein - none -
fig|6666666.67457.peg.1388 CDS gi|227860985|gb|ACLI01000073.1| 9102 8956 -3 - 147 hypothetical protein - none -
fig|6666666.67457.peg.1389 CDS gi|227860985|gb|ACLI01000073.1| 9058 10434 1 + 1377 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67457.peg.1390 CDS gi|227860985|gb|ACLI01000073.1| 10446 11423 3 + 978 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67457.peg.1391 CDS gi|227860985|gb|ACLI01000073.1| 11452 12072 1 + 621 FIG00545789: hypothetical protein - none -
fig|6666666.67457.peg.1392 CDS gi|227860985|gb|ACLI01000073.1| 12297 12965 3 + 669 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67457.peg.1393 CDS gi|227860985|gb|ACLI01000073.1| 13108 13641 1 + 534 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67457.peg.1394 CDS gi|227860985|gb|ACLI01000073.1| 13827 13642 -3 - 186 hypothetical protein - none -
fig|6666666.67457.peg.1395 CDS gi|227860985|gb|ACLI01000073.1| 14003 13833 -2 - 171 FIG00544981: hypothetical protein - none -
fig|6666666.67457.peg.1396 CDS gi|227860985|gb|ACLI01000073.1| 15589 14147 -1 - 1443 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67457.peg.1397 CDS gi|227860985|gb|ACLI01000073.1| 16665 15640 -3 - 1026 2-nitropropane dioxygenase (EC 1.13.11.32) - none -
fig|6666666.67457.peg.1398 CDS gi|227860985|gb|ACLI01000073.1| 16655 17317 2 + 663 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67457.peg.1399 CDS gi|227860985|gb|ACLI01000073.1| 18037 17336 -1 - 702 Urea ABC transporter, ATPase protein UrtE Urea decomposition
fig|6666666.67457.peg.1400 CDS gi|227860985|gb|ACLI01000073.1| 18780 18037 -3 - 744 Urea ABC transporter, ATPase protein UrtD Urea decomposition
fig|6666666.67457.peg.1401 CDS gi|227860985|gb|ACLI01000073.1| 19910 18777 -2 - 1134 Urea ABC transporter, permease protein UrtC Urea decomposition
fig|6666666.67457.peg.1402 CDS gi|227860985|gb|ACLI01000073.1| 20791 19907 -1 - 885 Urea ABC transporter, permease protein UrtB Urea decomposition
fig|6666666.67457.peg.1403 CDS gi|227860985|gb|ACLI01000073.1| 21922 20810 -1 - 1113 Urea ABC transporter, substrate binding protein UrtA Urea decomposition
fig|6666666.67457.peg.1404 CDS gi|227860985|gb|ACLI01000073.1| 22913 22197 -2 - 717 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67457.peg.1405 CDS gi|227860985|gb|ACLI01000073.1| 23689 23042 -1 - 648 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67457.peg.1406 CDS gi|227860985|gb|ACLI01000073.1| 24355 23702 -1 - 654 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67457.peg.1407 CDS gi|227860985|gb|ACLI01000073.1| 24860 24411 -2 - 450 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67457.peg.1408 CDS gi|227860985|gb|ACLI01000073.1| 26590 24875 -1 - 1716 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67457.peg.1409 CDS gi|227860985|gb|ACLI01000073.1| 26808 26590 -3 - 219 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67457.peg.1410 CDS gi|227860985|gb|ACLI01000073.1| 27232 26963 -1 - 270 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67457.peg.1411 CDS gi|227860985|gb|ACLI01000073.1| 27433 29073 1 + 1641 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67457.peg.1412 CDS gi|227860985|gb|ACLI01000073.1| 29266 29787 1 + 522 hypothetical protein - none -
fig|6666666.67457.peg.1413 CDS gi|227860985|gb|ACLI01000073.1| 29887 30369 1 + 483 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.67457.peg.1414 CDS gi|227860985|gb|ACLI01000073.1| 30362 31012 2 + 651 benzyl alcohol dehydrogenase - none -
fig|6666666.67457.peg.1415 CDS gi|227860985|gb|ACLI01000073.1| 31712 31113 -2 - 600 FIG00545707: hypothetical protein - none -
fig|6666666.67457.peg.1416 CDS gi|227860985|gb|ACLI01000073.1| 32501 31920 -2 - 582 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.67457.peg.1417 CDS gi|227860985|gb|ACLI01000073.1| 32664 35057 3 + 2394 FIG00548670: hypothetical protein - none -
fig|6666666.67457.peg.1418 CDS gi|227860985|gb|ACLI01000073.1| 35041 35628 1 + 588 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.1419 CDS gi|227860985|gb|ACLI01000073.1| 37195 35741 -1 - 1455 FIG00548782: hypothetical protein - none -
fig|6666666.67457.peg.1420 CDS gi|227860985|gb|ACLI01000073.1| 37346 38551 2 + 1206 FIG00544244: hypothetical protein - none -
fig|6666666.67457.peg.1421 CDS gi|227860985|gb|ACLI01000073.1| 39266 38544 -2 - 723 FIG00544902: hypothetical protein - none -
fig|6666666.67457.peg.1422 CDS gi|227860985|gb|ACLI01000073.1| 40415 39351 -2 - 1065 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67457.peg.1423 CDS gi|227860985|gb|ACLI01000073.1| 40462 41328 1 + 867 FIG00544241: hypothetical protein - none -
fig|6666666.67457.peg.1424 CDS gi|227860985|gb|ACLI01000073.1| 42409 41354 -1 - 1056 FIG00545275: hypothetical protein - none -
fig|6666666.67457.peg.1425 CDS gi|227860985|gb|ACLI01000073.1| 42848 42525 -2 - 324 FIG00546704: hypothetical protein - none -
fig|6666666.67457.peg.1426 CDS gi|227860985|gb|ACLI01000073.1| 43271 42945 -2 - 327 FIG00544339: hypothetical protein - none -
fig|6666666.67457.peg.1427 CDS gi|227860985|gb|ACLI01000073.1| 43487 43870 2 + 384 FIG00546761: hypothetical protein - none -
fig|6666666.67457.peg.1428 CDS gi|227860985|gb|ACLI01000073.1| 44618 43878 -2 - 741 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67457.peg.1429 CDS gi|227860985|gb|ACLI01000073.1| 46567 44720 -1 - 1848 ABC transporter, ATP-binding protein - none -
fig|6666666.67457.peg.1430 CDS gi|227860985|gb|ACLI01000073.1| 47527 46580 -1 - 948 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67457.peg.1431 CDS gi|227860985|gb|ACLI01000073.1| 48393 47524 -3 - 870 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67457.peg.1432 CDS gi|227860985|gb|ACLI01000073.1| 49700 48528 -2 - 1173 Cell wall-binding protein - none -
fig|6666666.67457.peg.1433 CDS gi|227860985|gb|ACLI01000073.1| 50711 49875 -2 - 837 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67457.peg.1434 CDS gi|227860985|gb|ACLI01000073.1| 50732 51349 2 + 618 FIG00548678: hypothetical protein - none -
fig|6666666.67457.peg.1435 CDS gi|227860985|gb|ACLI01000073.1| 53387 51336 -2 - 2052 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.67457.peg.1436 CDS gi|227860985|gb|ACLI01000073.1| 55329 53497 -3 - 1833 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67457.peg.1437 CDS gi|227860985|gb|ACLI01000073.1| 55264 55383 1 + 120 hypothetical protein - none -
fig|6666666.67457.peg.1438 CDS gi|227860985|gb|ACLI01000073.1| 57167 55380 -2 - 1788 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.67457.peg.1439 CDS gi|227860985|gb|ACLI01000073.1| 58176 57328 -3 - 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67457.peg.1440 CDS gi|227860985|gb|ACLI01000073.1| 58269 59774 3 + 1506 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1441 CDS gi|227860985|gb|ACLI01000073.1| 60990 59791 -3 - 1200 putative amylase - none -
fig|6666666.67457.peg.1442 CDS gi|227860985|gb|ACLI01000073.1| 61667 60996 -2 - 672 hypothetical membrane protein - none -
fig|6666666.67457.peg.1443 CDS gi|227860985|gb|ACLI01000073.1| 62067 61660 -3 - 408 FIG00544115: hypothetical protein - none -
fig|6666666.67457.peg.1444 CDS gi|227860985|gb|ACLI01000073.1| 63336 62083 -3 - 1254 putative transport protein - none -
fig|6666666.67457.peg.1445 CDS gi|227860985|gb|ACLI01000073.1| 64603 63410 -1 - 1194 FIG00544639: hypothetical protein - none -
fig|6666666.67457.peg.1446 CDS gi|227860985|gb|ACLI01000073.1| 65373 64696 -3 - 678 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.67457.peg.1447 CDS gi|227860985|gb|ACLI01000073.1| 66654 65395 -3 - 1260 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67457.peg.1448 CDS gi|227860985|gb|ACLI01000073.1| 67814 66864 -2 - 951 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67457.peg.1449 CDS gi|227860985|gb|ACLI01000073.1| 67881 68456 3 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67457.peg.1450 CDS gi|227860985|gb|ACLI01000073.1| 68472 69119 3 + 648 FIG00546567: hypothetical protein - none -
fig|6666666.67457.peg.1451 CDS gi|227860985|gb|ACLI01000073.1| 69249 69704 3 + 456 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67457.peg.1452 CDS gi|227860985|gb|ACLI01000073.1| 69946 69764 -1 - 183 FIG00544516: hypothetical protein - none -
fig|6666666.67457.peg.1453 CDS gi|227860985|gb|ACLI01000073.1| 70552 69962 -1 - 591 molybdopterin biosynthesis enzyme - none -
fig|6666666.67457.peg.1454 CDS gi|227860985|gb|ACLI01000073.1| 71714 70608 -2 - 1107 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67457.peg.1455 CDS gi|227860985|gb|ACLI01000073.1| 73495 72029 -1 - 1467 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.67457.peg.1456 CDS gi|227860985|gb|ACLI01000073.1| 74193 73492 -3 - 702 two-component system, response regulator - none -
fig|6666666.67457.peg.1457 CDS gi|227860985|gb|ACLI01000073.1| 74603 74430 -2 - 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67457.peg.1458 CDS gi|227860985|gb|ACLI01000073.1| 74881 74615 -1 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67457.peg.1459 CDS gi|227860985|gb|ACLI01000073.1| 75198 75599 3 + 402 putative transcription regulator - none -
fig|6666666.67457.peg.1460 CDS gi|227860985|gb|ACLI01000073.1| 75596 77368 2 + 1773 Sulfate permease Cysteine Biosynthesis
fig|6666666.67457.peg.1461 CDS gi|227860985|gb|ACLI01000073.1| 77706 77846 3 + 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67457.peg.1462 CDS gi|227860985|gb|ACLI01000073.1| 77849 78013 2 + 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67457.peg.1463 CDS gi|227860985|gb|ACLI01000073.1| 78017 78322 2 + 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67457.peg.1464 CDS gi|227860985|gb|ACLI01000073.1| 78334 78585 1 + 252 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67457.peg.1465 CDS gi|227860985|gb|ACLI01000073.1| 78725 79582 2 + 858 No significant database matches - none -
fig|6666666.67457.peg.1466 CDS gi|227860985|gb|ACLI01000073.1| 79681 80352 1 + 672 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.1467 CDS gi|227860985|gb|ACLI01000073.1| 81142 80330 -1 - 813 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.67457.peg.1468 CDS gi|227860985|gb|ACLI01000073.1| 82800 81235 -3 - 1566 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67457.peg.1469 CDS gi|227860985|gb|ACLI01000073.1| 83439 82807 -3 - 633 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.67457.peg.1470 CDS gi|227860985|gb|ACLI01000073.1| 84958 83414 -1 - 1545 FIG00544804: hypothetical protein - none -
fig|6666666.67457.peg.1471 CDS gi|227860985|gb|ACLI01000073.1| 85617 86363 3 + 747 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67457.peg.1472 CDS gi|227860985|gb|ACLI01000073.1| 86575 87120 1 + 546 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67457.peg.1473 CDS gi|227860985|gb|ACLI01000073.1| 87185 87787 2 + 603 ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.1474 CDS gi|227860985|gb|ACLI01000073.1| 87784 90342 1 + 2559 FIG00545210: hypothetical protein - none -
fig|6666666.67457.peg.1475 CDS gi|227860985|gb|ACLI01000073.1| 92822 90348 -2 - 2475 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67457.peg.1476 CDS gi|227860985|gb|ACLI01000073.1| 92915 93217 2 + 303 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67457.peg.1477 CDS gi|227860985|gb|ACLI01000073.1| 93311 94399 2 + 1089 hypothetical protein - none -
fig|6666666.67457.peg.1478 CDS gi|227860985|gb|ACLI01000073.1| 94606 96234 1 + 1629 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.1479 CDS gi|227860985|gb|ACLI01000073.1| 96276 97439 3 + 1164 putative transport protein - none -
fig|6666666.67457.peg.1480 CDS gi|227860985|gb|ACLI01000073.1| 97533 97874 3 + 342 hypothetical protein - none -
fig|6666666.67457.peg.1481 CDS gi|227860985|gb|ACLI01000073.1| 97871 98596 2 + 726 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67457.peg.1482 CDS gi|227860985|gb|ACLI01000073.1| 99058 98609 -1 - 450 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1483 CDS gi|227860985|gb|ACLI01000073.1| 99801 99019 -3 - 783 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67457.peg.1484 CDS gi|227860985|gb|ACLI01000073.1| 104583 99811 -3 - 4773 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67457.peg.1485 CDS gi|227860985|gb|ACLI01000073.1| 104618 105376 2 + 759 inositol monophosphatase family protein - none -
fig|6666666.67457.peg.1486 CDS gi|227860985|gb|ACLI01000073.1| 105430 106233 1 + 804 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.67457.peg.1487 CDS gi|227860985|gb|ACLI01000073.1| 106230 106715 3 + 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67457.peg.1488 CDS gi|227860985|gb|ACLI01000073.1| 106740 106988 3 + 249 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.67457.peg.1489 CDS gi|227860985|gb|ACLI01000073.1| 107373 107098 -3 - 276 FIG00544401: hypothetical protein - none -
fig|6666666.67457.peg.1490 CDS gi|227860986|gb|ACLI01000072.1| 1931 183 -2 - 1749 putative sulfate transport protein - none -
fig|6666666.67457.peg.1491 CDS gi|227860986|gb|ACLI01000072.1| 3716 2103 -2 - 1614 putative transport protein - none -
fig|6666666.67457.peg.1492 CDS gi|227860986|gb|ACLI01000072.1| 3980 3717 -2 - 264 protein of unknown function DUF485 - none -
fig|6666666.67457.peg.1493 CDS gi|227860986|gb|ACLI01000072.1| 5166 4561 -3 - 606 FIG00544295: hypothetical protein - none -
fig|6666666.67457.peg.1494 CDS gi|227860986|gb|ACLI01000072.1| 8388 5218 -3 - 3171 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67457.peg.1495 CDS gi|227860986|gb|ACLI01000072.1| 8981 8604 -2 - 378 hypothetical protein - none -
fig|6666666.67457.peg.1496 CDS gi|227860986|gb|ACLI01000072.1| 9521 9081 -2 - 441 FIG00544626: hypothetical protein - none -
fig|6666666.67457.peg.1497 CDS gi|227860986|gb|ACLI01000072.1| 10187 9630 -2 - 558 hypothetical protein - none -
fig|6666666.67457.peg.1498 CDS gi|227860986|gb|ACLI01000072.1| 11659 10574 -1 - 1086 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.67457.peg.1499 CDS gi|227860986|gb|ACLI01000072.1| 12429 11674 -3 - 756 PUTATIVE DICARBOXYLIC ACID HYDROLASE - none -
fig|6666666.67457.peg.1500 CDS gi|227860986|gb|ACLI01000072.1| 12695 14314 2 + 1620 Sodium-dependent transporter - none -
fig|6666666.67457.peg.1501 CDS gi|227860986|gb|ACLI01000072.1| 14311 14493 1 + 183 FIG00547082: hypothetical protein - none -
fig|6666666.67457.peg.1502 CDS gi|227860986|gb|ACLI01000072.1| 14549 16015 2 + 1467 FIG00546199: hypothetical protein - none -
fig|6666666.67457.peg.1503 CDS gi|227860986|gb|ACLI01000072.1| 16148 16912 2 + 765 FIG00544176: hypothetical protein - none -
fig|6666666.67457.peg.1504 CDS gi|227860986|gb|ACLI01000072.1| 17935 16958 -1 - 978 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67457.peg.1505 CDS gi|227860986|gb|ACLI01000072.1| 18059 19300 2 + 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67457.peg.1506 CDS gi|227860986|gb|ACLI01000072.1| 19342 19590 1 + 249 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67457.peg.1507 CDS gi|227860986|gb|ACLI01000072.1| 20166 19642 -3 - 525 FIG00545451: hypothetical protein - none -
fig|6666666.67457.peg.1508 CDS gi|227860986|gb|ACLI01000072.1| 20486 21487 2 + 1002 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.1509 CDS gi|227860986|gb|ACLI01000072.1| 22099 23265 1 + 1167 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.67457.peg.1510 CDS gi|227860986|gb|ACLI01000072.1| 23252 23368 2 + 117 hypothetical protein - none -
fig|6666666.67457.peg.1511 CDS gi|227860986|gb|ACLI01000072.1| 23413 24183 1 + 771 L-carnitine dehydratase/bile acid-inducible protein F - none -
fig|6666666.67457.peg.1512 CDS gi|227860986|gb|ACLI01000072.1| 25023 24259 -3 - 765 Transcriptional regulator, GntR family - none -
fig|6666666.67457.peg.1513 CDS gi|227860986|gb|ACLI01000072.1| 25286 26695 2 + 1410 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67457.peg.1514 CDS gi|227860986|gb|ACLI01000072.1| 28064 26802 -2 - 1263 FIG00546478: hypothetical protein - none -
fig|6666666.67457.peg.1515 CDS gi|227860986|gb|ACLI01000072.1| 28907 28230 -2 - 678 Transcriptional regulator, GntR family - none -
fig|6666666.67457.peg.1516 CDS gi|227860986|gb|ACLI01000072.1| 29056 30417 1 + 1362 FIG00545033: hypothetical protein - none -
fig|6666666.67457.peg.1517 CDS gi|227860986|gb|ACLI01000072.1| 30482 31249 2 + 768 Lactam utilization protein LamB EC699-706;
Urea carboxylase and Allophanate hydrolase cluster
fig|6666666.67457.peg.1518 CDS gi|227860986|gb|ACLI01000072.1| 31269 31898 3 + 630 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) EC699-706;
Urea carboxylase and Allophanate hydrolase cluster
fig|6666666.67457.peg.1519 CDS gi|227860986|gb|ACLI01000072.1| 31895 32782 2 + 888 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) EC699-706;
Urea carboxylase and Allophanate hydrolase cluster
fig|6666666.67457.peg.1520 CDS gi|227860986|gb|ACLI01000072.1| 33372 32779 -3 - 594 sortase or related acyltransferase - none -
fig|6666666.67457.peg.1521 CDS gi|227860986|gb|ACLI01000072.1| 34061 33381 -2 - 681 putative LysR-family transcriptional regulator - none -
fig|6666666.67457.peg.1522 CDS gi|227860986|gb|ACLI01000072.1| 34125 34466 3 + 342 FIG00546727: hypothetical protein - none -
fig|6666666.67457.peg.1523 CDS gi|227860986|gb|ACLI01000072.1| 35200 34463 -1 - 738 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67457.peg.1524 CDS gi|227860986|gb|ACLI01000072.1| 37065 35197 -3 - 1869 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67457.peg.1525 CDS gi|227860986|gb|ACLI01000072.1| 38462 37158 -2 - 1305 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.67457.peg.1526 CDS gi|227860986|gb|ACLI01000072.1| 38689 39675 1 + 987 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67457.peg.1527 CDS gi|227860986|gb|ACLI01000072.1| 40257 39739 -3 - 519 FIG00544436: hypothetical protein - none -
fig|6666666.67457.peg.1528 CDS gi|227860986|gb|ACLI01000072.1| 41093 40284 -2 - 810 (2E,6Z)-farnesyl diphosphate synthase (EC 2.5.1.68) Isoprenoinds for Quinones
fig|6666666.67457.peg.1529 CDS gi|227860986|gb|ACLI01000072.1| 42430 41273 -1 - 1158 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.1530 CDS gi|227860986|gb|ACLI01000072.1| 42927 42607 -3 - 321 FIG00543949: hypothetical protein - none -
fig|6666666.67457.peg.1531 CDS gi|227860986|gb|ACLI01000072.1| 43860 42985 -3 - 876 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67457.peg.1532 CDS gi|227860986|gb|ACLI01000072.1| 44093 44578 2 + 486 FIG00544319: hypothetical protein - none -
fig|6666666.67457.peg.1533 CDS gi|227860986|gb|ACLI01000072.1| 44754 45278 3 + 525 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67457.peg.1534 CDS gi|227860986|gb|ACLI01000072.1| 45294 45770 3 + 477 FIG00545488: hypothetical protein - none -
fig|6666666.67457.peg.1535 CDS gi|227860986|gb|ACLI01000072.1| 46686 45868 -3 - 819 FIG00543890: hypothetical protein - none -
fig|6666666.67457.peg.1536 CDS gi|227860986|gb|ACLI01000072.1| 47793 46795 -3 - 999 Transcriptional regulator, AraC family - none -
fig|6666666.67457.peg.1537 CDS gi|227860986|gb|ACLI01000072.1| 49081 48113 -1 - 969 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67457.peg.1538 CDS gi|227860986|gb|ACLI01000072.1| 49524 49081 -3 - 444 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67457.peg.1539 CDS gi|227860986|gb|ACLI01000072.1| 50123 49671 -2 - 453 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67457.peg.1540 CDS gi|227860986|gb|ACLI01000072.1| 51636 50359 -3 - 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.67457.peg.1541 CDS gi|227860986|gb|ACLI01000072.1| 52670 51882 -2 - 789 FIG00545464: hypothetical protein - none -
fig|6666666.67457.peg.1542 CDS gi|227860986|gb|ACLI01000072.1| 52984 53364 1 + 381 FIG00547647: hypothetical protein - none -
fig|6666666.67457.peg.1543 CDS gi|227860986|gb|ACLI01000072.1| 53524 53901 1 + 378 FIG00546185: hypothetical protein - none -
fig|6666666.67457.peg.1544 CDS gi|227860986|gb|ACLI01000072.1| 54647 54036 -2 - 612 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67457.peg.1545 CDS gi|227860986|gb|ACLI01000072.1| 54937 54659 -1 - 279 hypothetical protein - none -
fig|6666666.67457.peg.1546 CDS gi|227860986|gb|ACLI01000072.1| 55021 56571 1 + 1551 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Polyamine Metabolism
fig|6666666.67457.peg.1547 CDS gi|227860986|gb|ACLI01000072.1| 60249 56593 -3 - 3657 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67457.peg.1548 CDS gi|227860986|gb|ACLI01000072.1| 60998 60246 -2 - 753 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.1549 CDS gi|227860986|gb|ACLI01000072.1| 61966 61244 -1 - 723 hypothetical protein - none -
fig|6666666.67457.peg.1550 CDS gi|227860986|gb|ACLI01000072.1| 62480 62199 -2 - 282 hypothetical protein - none -
fig|6666666.67457.peg.1551 CDS gi|227860986|gb|ACLI01000072.1| 62721 64742 3 + 2022 Gamma-glutamyltranspeptidase (EC 2.3.2.2) - none -
fig|6666666.67457.peg.1552 CDS gi|227860986|gb|ACLI01000072.1| 66497 64758 -2 - 1740 FIG00550008: hypothetical protein - none -
fig|6666666.67457.peg.1553 CDS gi|227860987|gb|ACLI01000071.1| 18 953 3 + 936 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67457.peg.1554 CDS gi|227860987|gb|ACLI01000071.1| 1324 959 -1 - 366 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.67457.peg.1555 CDS gi|227860987|gb|ACLI01000071.1| 2320 1382 -1 - 939 putative oxidoreductase - none -
fig|6666666.67457.peg.1556 CDS gi|227860987|gb|ACLI01000071.1| 3182 2400 -2 - 783 putative 3-alpha-hydroxysteroid dehydrogenase - none -
fig|6666666.67457.peg.1557 CDS gi|227860987|gb|ACLI01000071.1| 3807 3208 -3 - 600 hypothetical protein - none -
fig|6666666.67457.peg.1558 CDS gi|227860987|gb|ACLI01000071.1| 4634 3867 -2 - 768 FIG00547971: hypothetical protein - none -
fig|6666666.67457.peg.1559 CDS gi|227860987|gb|ACLI01000071.1| 5313 4765 -3 - 549 Histone acetyltransferase HPA2 and related acetyltransferases - none -
fig|6666666.67457.peg.1560 CDS gi|227860987|gb|ACLI01000071.1| 6130 5351 -1 - 780 FIG00549881: hypothetical protein - none -
fig|6666666.67457.peg.1561 CDS gi|227860987|gb|ACLI01000071.1| 6825 6130 -3 - 696 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67457.peg.1562 CDS gi|227860987|gb|ACLI01000071.1| 6972 8402 3 + 1431 Magnesium chelatase, subunit ChlI (EC 6.6.1.1) CBSS-336982.3.peg.1011
fig|6666666.67457.peg.1563 CDS gi|227860987|gb|ACLI01000071.1| 8446 10407 1 + 1962 FIG019045: long form Mg-chelase associated protein with vWA domain CBSS-336982.3.peg.1011
fig|6666666.67457.peg.1564 CDS gi|227860987|gb|ACLI01000071.1| 10414 11301 1 + 888 putative phosphotransferase - none -
fig|6666666.67457.peg.1565 CDS gi|227860987|gb|ACLI01000071.1| 11408 12787 2 + 1380 Putative secreted protein - none -
fig|6666666.67457.peg.1566 CDS gi|227860987|gb|ACLI01000071.1| 14447 12795 -2 - 1653 ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.1567 CDS gi|227860987|gb|ACLI01000071.1| 14517 15554 3 + 1038 FIG00997038: hypothetical protein - none -
fig|6666666.67457.peg.1568 CDS gi|227860987|gb|ACLI01000071.1| 16649 15549 -2 - 1101 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.67457.peg.1569 CDS gi|227860987|gb|ACLI01000071.1| 17353 16742 -1 - 612 hypothetical protein - none -
fig|6666666.67457.peg.1570 CDS gi|227860987|gb|ACLI01000071.1| 18221 17343 -2 - 879 conserved hypothetical protein, putative hydrolase - none -
fig|6666666.67457.peg.1571 CDS gi|227860987|gb|ACLI01000071.1| 18296 19546 2 + 1251 hypothetical protein - none -
fig|6666666.67457.peg.1572 CDS gi|227860987|gb|ACLI01000071.1| 19951 19526 -1 - 426 hypothetical protein - none -
fig|6666666.67457.peg.1573 CDS gi|227860987|gb|ACLI01000071.1| 20100 19948 -3 - 153 putative membrane protein - none -
fig|6666666.67457.peg.1574 CDS gi|227860988|gb|ACLI01000070.1| 1435 722 -1 - 714 hypothetical protein - none -
fig|6666666.67457.peg.1575 CDS gi|227860988|gb|ACLI01000070.1| 2275 1595 -1 - 681 FIG00544048: hypothetical protein - none -
fig|6666666.67457.peg.1576 CDS gi|227860988|gb|ACLI01000070.1| 2831 2313 -2 - 519 PROBABLE TRANSMEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1577 CDS gi|227860988|gb|ACLI01000070.1| 3013 4266 1 + 1254 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67457.peg.1578 CDS gi|227860988|gb|ACLI01000070.1| 4259 4813 2 + 555 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1579 CDS gi|227860988|gb|ACLI01000070.1| 4824 5582 3 + 759 hypothetical protein - none -
fig|6666666.67457.peg.1580 CDS gi|227860988|gb|ACLI01000070.1| 5717 6742 2 + 1026 Mrp protein homolog - none -
fig|6666666.67457.peg.1581 CDS gi|227860988|gb|ACLI01000070.1| 7321 6824 -1 - 498 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67457.peg.1582 CDS gi|227860988|gb|ACLI01000070.1| 7949 7353 -2 - 597 FIG00544000: hypothetical protein - none -
fig|6666666.67457.peg.1583 CDS gi|227860988|gb|ACLI01000070.1| 8756 8115 -2 - 642 putative RNA polymerase sigma factor - none -
fig|6666666.67457.peg.1584 CDS gi|227860988|gb|ACLI01000070.1| 8921 9565 2 + 645 FIG00945644: hypothetical protein - none -
fig|6666666.67457.peg.1585 CDS gi|227860988|gb|ACLI01000070.1| 10896 9667 -3 - 1230 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.67457.peg.1586 CDS gi|227860988|gb|ACLI01000070.1| 11166 12326 3 + 1161 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.67457.peg.1587 CDS gi|227860988|gb|ACLI01000070.1| 12508 14016 1 + 1509 levanase/invertase - none -
fig|6666666.67457.peg.1588 CDS gi|227860988|gb|ACLI01000070.1| 15028 14159 -1 - 870 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67457.peg.1589 CDS gi|227860988|gb|ACLI01000070.1| 15284 15153 -2 - 132 FIG00545868: hypothetical protein - none -
fig|6666666.67457.peg.1590 CDS gi|227860988|gb|ACLI01000070.1| 15757 15380 -1 - 378 FIG00545506: hypothetical protein - none -
fig|6666666.67457.peg.1591 CDS gi|227860988|gb|ACLI01000070.1| 16491 15751 -3 - 741 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.67457.peg.1592 CDS gi|227860988|gb|ACLI01000070.1| 17345 16488 -2 - 858 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.67457.peg.1593 CDS gi|227860988|gb|ACLI01000070.1| 18147 17365 -3 - 783 FIG00543965: hypothetical protein - none -
fig|6666666.67457.peg.1594 CDS gi|227860988|gb|ACLI01000070.1| 19372 18215 -1 - 1158 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.1595 CDS gi|227860988|gb|ACLI01000070.1| 19423 20511 1 + 1089 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.1596 CDS gi|227860988|gb|ACLI01000070.1| 20648 22108 2 + 1461 Aromatic amino acid transport protein AroP - none -
fig|6666666.67457.peg.1597 CDS gi|227860988|gb|ACLI01000070.1| 22125 23048 3 + 924 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.1598 CDS gi|227860988|gb|ACLI01000070.1| 23590 23057 -1 - 534 FIG00544080: hypothetical protein - none -
fig|6666666.67457.peg.1599 CDS gi|227860988|gb|ACLI01000070.1| 24813 23701 -3 - 1113 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.1600 CDS gi|227860988|gb|ACLI01000070.1| 25049 24825 -2 - 225 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.67457.peg.1601 CDS gi|227860988|gb|ACLI01000070.1| 25607 25209 -2 - 399 hypothetical membrane protein - none -
fig|6666666.67457.peg.1602 CDS gi|227860988|gb|ACLI01000070.1| 26509 25613 -1 - 897 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67457.peg.1603 CDS gi|227860988|gb|ACLI01000070.1| 28160 26499 -2 - 1662 LpqW - none -
fig|6666666.67457.peg.1604 CDS gi|227860988|gb|ACLI01000070.1| 30060 28273 -3 - 1788 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.67457.peg.1605 CDS gi|227860988|gb|ACLI01000070.1| 30664 31422 1 + 759 FIG00544264: hypothetical protein - none -
fig|6666666.67457.peg.1606 CDS gi|227860988|gb|ACLI01000070.1| 31430 31969 2 + 540 FIG00544603: hypothetical protein - none -
fig|6666666.67457.peg.1607 CDS gi|227860988|gb|ACLI01000070.1| 33680 32454 -2 - 1227 FIG00545606: hypothetical protein - none -
fig|6666666.67457.peg.1608 CDS gi|227860988|gb|ACLI01000070.1| 33860 34207 2 + 348 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67457.peg.1609 CDS gi|227860988|gb|ACLI01000070.1| 34315 35145 1 + 831 FIG00548480: hypothetical protein - none -
fig|6666666.67457.peg.1610 CDS gi|227860988|gb|ACLI01000070.1| 35194 35589 1 + 396 FIG00546565: hypothetical protein - none -
fig|6666666.67457.peg.1611 CDS gi|227860988|gb|ACLI01000070.1| 35997 35566 -3 - 432 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67457.peg.1612 CDS gi|227860988|gb|ACLI01000070.1| 36361 35990 -1 - 372 hypothetical protein - none -
fig|6666666.67457.peg.1613 CDS gi|227860988|gb|ACLI01000070.1| 37318 36389 -1 - 930 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67457.peg.1614 CDS gi|227860988|gb|ACLI01000070.1| 37403 38371 2 + 969 Membrane protein, putative - none -
fig|6666666.67457.peg.1615 CDS gi|227860988|gb|ACLI01000070.1| 38647 40653 1 + 2007 hypothetical protein - none -
fig|6666666.67457.peg.1616 CDS gi|227860988|gb|ACLI01000070.1| 41278 40781 -1 - 498 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.67457.peg.1617 CDS gi|227860988|gb|ACLI01000070.1| 41264 43792 2 + 2529 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67457.peg.1618 CDS gi|227860988|gb|ACLI01000070.1| 44499 43810 -3 - 690 FIG00547157: hypothetical protein - none -
fig|6666666.67457.peg.1619 CDS gi|227860988|gb|ACLI01000070.1| 45674 44607 -2 - 1068 Ca2+/H+ antiporter - none -
fig|6666666.67457.peg.1620 CDS gi|227860988|gb|ACLI01000070.1| 46222 45746 -1 - 477 FIG00546937: hypothetical protein - none -
fig|6666666.67457.peg.1621 CDS gi|227860988|gb|ACLI01000070.1| 46974 46219 -3 - 756 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67457.peg.1622 CDS gi|227860988|gb|ACLI01000070.1| 48341 46971 -2 - 1371 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67457.peg.1623 CDS gi|227860988|gb|ACLI01000070.1| 49033 48350 -1 - 684 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67457.peg.1624 CDS gi|227860988|gb|ACLI01000070.1| 49494 49375 -3 - 120 hypothetical protein - none -
fig|6666666.67457.peg.1625 CDS gi|227860988|gb|ACLI01000070.1| 49510 50709 1 + 1200 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) p-Hydroxybenzoate degradation
fig|6666666.67457.peg.1626 CDS gi|227860988|gb|ACLI01000070.1| 50758 52080 1 + 1323 4-hydroxybenzoate transporter Gentisate degradation;
Salicylate and gentisate catabolism;
p-Hydroxybenzoate degradation
fig|6666666.67457.peg.1627 CDS gi|227860988|gb|ACLI01000070.1| 52288 53037 1 + 750 Transcriptional regulator, GntR family - none -
fig|6666666.67457.peg.1628 CDS gi|227860988|gb|ACLI01000070.1| 53618 53067 -2 - 552 Putative secreted protein - none -
fig|6666666.67457.peg.1629 CDS gi|227860988|gb|ACLI01000070.1| 55321 53894 -1 - 1428 hypothetical protein - none -
fig|6666666.67457.peg.1630 CDS gi|227860988|gb|ACLI01000070.1| 55717 55896 1 + 180 hypothetical protein - none -
fig|6666666.67457.peg.1631 CDS gi|227860988|gb|ACLI01000070.1| 55917 56432 3 + 516 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1632 CDS gi|227860988|gb|ACLI01000070.1| 56429 57607 2 + 1179 Glutathione-dependent formaldehyde dehydrogenase - none -
fig|6666666.67457.peg.1633 CDS gi|227860988|gb|ACLI01000070.1| 57720 59510 3 + 1791 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - none -
fig|6666666.67457.peg.1634 CDS gi|227860988|gb|ACLI01000070.1| 59574 60644 3 + 1071 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.67457.peg.1635 CDS gi|227860988|gb|ACLI01000070.1| 61090 60641 -1 - 450 FIG00544525: hypothetical protein - none -
fig|6666666.67457.peg.1636 CDS gi|227860988|gb|ACLI01000070.1| 61204 61845 1 + 642 FIG00544130: hypothetical protein - none -
fig|6666666.67457.peg.1637 CDS gi|227860988|gb|ACLI01000070.1| 62557 61856 -1 - 702 FIG00545591: hypothetical protein - none -
fig|6666666.67457.peg.1638 CDS gi|227860988|gb|ACLI01000070.1| 62793 62557 -3 - 237 membrane protein - none -
fig|6666666.67457.peg.1639 CDS gi|227860988|gb|ACLI01000070.1| 62856 63380 3 + 525 hypothetical protein - none -
fig|6666666.67457.peg.1640 CDS gi|227860988|gb|ACLI01000070.1| 63521 64186 2 + 666 Nudix-related transcriptional regulator NrtR NAD and NADP cofactor biosynthesis global
fig|6666666.67457.peg.1641 CDS gi|227860988|gb|ACLI01000070.1| 64254 65603 3 + 1350 Quinolinate synthetase (EC 2.5.1.72) NAD and NADP cofactor biosynthesis global
fig|6666666.67457.peg.1642 CDS gi|227860988|gb|ACLI01000070.1| 65600 66442 2 + 843 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) NAD and NADP cofactor biosynthesis global
fig|6666666.67457.peg.1643 CDS gi|227860989|gb|ACLI01000069.1| 45 1100 3 + 1056 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67457.peg.1644 CDS gi|227860989|gb|ACLI01000069.1| 2465 1101 -2 - 1365 putative multidrug resistance protein - none -
fig|6666666.67457.peg.1645 CDS gi|227860989|gb|ACLI01000069.1| 3743 2469 -2 - 1275 putative multidrug resistance protein - none -
fig|6666666.67457.peg.1646 CDS gi|227860989|gb|ACLI01000069.1| 3732 3875 3 + 144 hypothetical protein - none -
fig|6666666.67457.peg.1647 CDS gi|227860989|gb|ACLI01000069.1| 3872 4357 2 + 486 FIG00547362: hypothetical protein - none -
fig|6666666.67457.peg.1648 CDS gi|227860989|gb|ACLI01000069.1| 4762 4364 -1 - 399 Serine-protein kinase RsbW (EC 2.7.11.1) SigmaB stress responce regulation
fig|6666666.67457.peg.1649 CDS gi|227860989|gb|ACLI01000069.1| 5109 4780 -3 - 330 Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV SigmaB stress responce regulation
fig|6666666.67457.peg.1650 CDS gi|227860989|gb|ACLI01000069.1| 5982 5110 -3 - 873 putative cellulose synthase catalytic subunit - none -
fig|6666666.67457.peg.1651 CDS gi|227860989|gb|ACLI01000069.1| 7102 5939 -1 - 1164 putative cellulose synthase catalytic subunit - none -
fig|6666666.67457.peg.1652 CDS gi|227860989|gb|ACLI01000069.1| 7893 7099 -3 - 795 FIG00511110: hypothetical protein - none -
fig|6666666.67457.peg.1653 CDS gi|227860989|gb|ACLI01000069.1| 8251 8036 -1 - 216 Serine phosphatase RsbU, regulator of sigma subunit SigmaB stress responce regulation
fig|6666666.67457.peg.1654 CDS gi|227860989|gb|ACLI01000069.1| 9257 8430 -2 - 828 FIG00544678: hypothetical protein - none -
fig|6666666.67457.peg.1655 CDS gi|227860989|gb|ACLI01000069.1| 10013 9351 -2 - 663 FIG00548916: hypothetical protein - none -
fig|6666666.67457.peg.1656 CDS gi|227860989|gb|ACLI01000069.1| 11341 10013 -1 - 1329 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67457.peg.1657 CDS gi|227860989|gb|ACLI01000069.1| 11330 11710 2 + 381 hypothetical protein - none -
fig|6666666.67457.peg.1658 CDS gi|227860989|gb|ACLI01000069.1| 12967 11981 -1 - 987 hypothetical protein - none -
fig|6666666.67457.peg.1659 CDS gi|227860989|gb|ACLI01000069.1| 13052 13504 2 + 453 conserved hypothetical protein - none -
fig|6666666.67457.peg.1660 CDS gi|227860989|gb|ACLI01000069.1| 13552 14361 1 + 810 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.1661 CDS gi|227860989|gb|ACLI01000069.1| 14388 15101 3 + 714 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1662 CDS gi|227860989|gb|ACLI01000069.1| 15183 18911 3 + 3729 FIG00543822: hypothetical protein - none -
fig|6666666.67457.peg.1663 CDS gi|227860989|gb|ACLI01000069.1| 19093 22758 1 + 3666 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67457.peg.1664 CDS gi|227860990|gb|ACLI01000068.1| 3286 1265 -1 - 2022 hypothetical protein - none -
fig|6666666.67457.peg.1665 CDS gi|227860990|gb|ACLI01000068.1| 5104 3680 -1 - 1425 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.67457.peg.1666 CDS gi|227860990|gb|ACLI01000068.1| 5463 6665 3 + 1203 hypothetical protein - none -
fig|6666666.67457.peg.1667 CDS gi|227860990|gb|ACLI01000068.1| 8010 6736 -3 - 1275 hypothetical protein - none -
fig|6666666.67457.peg.1668 CDS gi|227860990|gb|ACLI01000068.1| 8787 8179 -3 - 609 hypothetical protein - none -
fig|6666666.67457.peg.1669 CDS gi|227860990|gb|ACLI01000068.1| 10487 9129 -2 - 1359 Flavin-containing monooxygenase - none -
fig|6666666.67457.peg.1670 CDS gi|227860990|gb|ACLI01000068.1| 10964 10851 -2 - 114 hypothetical protein - none -
fig|6666666.67457.peg.1671 CDS gi|227860990|gb|ACLI01000068.1| 11275 10961 -1 - 315 hypothetical protein - none -
fig|6666666.67457.peg.1672 CDS gi|227860990|gb|ACLI01000068.1| 12999 11413 -3 - 1587 hypothetical protein - none -
fig|6666666.67457.peg.1673 CDS gi|227860990|gb|ACLI01000068.1| 13823 13065 -2 - 759 putative transcription regulator - none -
fig|6666666.67457.peg.1674 CDS gi|227860992|gb|ACLI01000066.1| 176 1528 2 + 1353 hypothetical protein - none -
fig|6666666.67457.peg.1675 CDS gi|227860993|gb|ACLI01000065.1| 69 362 3 + 294 Mobile element protein - none -
fig|6666666.67457.peg.1676 CDS gi|227860993|gb|ACLI01000065.1| 359 1255 2 + 897 Mobile element protein - none -
fig|6666666.67457.peg.1677 CDS gi|227860994|gb|ACLI01000064.1| 26 151 2 + 126 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67457.peg.1678 CDS gi|227860995|gb|ACLI01000063.1| 61 372 1 + 312 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.67457.peg.1679 CDS gi|227860996|gb|ACLI01000062.1| 307 765 1 + 459 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67457.peg.1680 CDS gi|227860996|gb|ACLI01000062.1| 766 1383 1 + 618 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67457.peg.1681 CDS gi|227860997|gb|ACLI01000061.1| 1316 1041 -2 - 276 hypothetical protein - none -
fig|6666666.67457.peg.1682 CDS gi|227860997|gb|ACLI01000061.1| 2135 2293 2 + 159 hypothetical protein - none -
fig|6666666.67457.peg.1683 CDS gi|227860997|gb|ACLI01000061.1| 4187 4050 -2 - 138 hypothetical protein - none -
fig|6666666.67457.peg.1684 CDS gi|227860998|gb|ACLI01000060.1| 28 753 1 + 726 Transcriptional regulator, AraC family - none -
fig|6666666.67457.peg.1685 CDS gi|227860998|gb|ACLI01000060.1| 1451 750 -2 - 702 FIG00544889: hypothetical protein - none -
fig|6666666.67457.peg.1686 CDS gi|227860998|gb|ACLI01000060.1| 2990 1800 -2 - 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67457.peg.1687 CDS gi|227860998|gb|ACLI01000060.1| 2955 3095 3 + 141 FIG00548059: hypothetical protein - none -
fig|6666666.67457.peg.1688 CDS gi|227860998|gb|ACLI01000060.1| 5448 3334 -3 - 2115 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67457.peg.1689 CDS gi|227860998|gb|ACLI01000060.1| 6291 5824 -3 - 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67457.peg.1690 CDS gi|227860998|gb|ACLI01000060.1| 6666 6298 -3 - 369 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67457.peg.1691 CDS gi|227860998|gb|ACLI01000060.1| 6986 7681 2 + 696 FIG00545089: hypothetical protein - none -
fig|6666666.67457.peg.1692 CDS gi|227860998|gb|ACLI01000060.1| 8492 7710 -2 - 783 putative DNA-binding protein - none -
fig|6666666.67457.peg.1693 CDS gi|227860999|gb|ACLI01000059.1| 1363 569 -1 - 795 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67457.peg.1694 CDS gi|227860999|gb|ACLI01000059.1| 2082 1537 -3 - 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67457.peg.1695 CDS gi|227860999|gb|ACLI01000059.1| 3404 2082 -2 - 1323 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67457.peg.1696 CDS gi|227860999|gb|ACLI01000059.1| 3696 4502 3 + 807 Transcriptional regulator, IclR family - none -
fig|6666666.67457.peg.1697 CDS gi|227860999|gb|ACLI01000059.1| 4702 6018 1 + 1317 putative cytochrome P450 hydroxylase - none -
fig|6666666.67457.peg.1698 CDS gi|227860999|gb|ACLI01000059.1| 6062 7159 2 + 1098 Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, N-terminal domain Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.1699 CDS gi|227860999|gb|ACLI01000059.1| 7231 9156 1 + 1926 Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, C-terminal domain Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.1700 CDS gi|227860999|gb|ACLI01000059.1| 9149 9931 2 + 783 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67457.peg.1701 CDS gi|227860999|gb|ACLI01000059.1| 10041 9928 -3 - 114 hypothetical protein - none -
fig|6666666.67457.peg.1702 CDS gi|227860999|gb|ACLI01000059.1| 10040 10360 2 + 321 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Iron-sulfur cluster assembly;
Soluble cytochromes and functionally related electron carriers
fig|6666666.67457.peg.1703 CDS gi|227860999|gb|ACLI01000059.1| 10371 11645 3 + 1275 putative rubredoxin reductase - none -
fig|6666666.67457.peg.1704 CDS gi|227860999|gb|ACLI01000059.1| 11642 12379 2 + 738 FIG00546671: hypothetical protein - none -
fig|6666666.67457.peg.1705 CDS gi|227860999|gb|ACLI01000059.1| 12379 13887 1 + 1509 NAD-dependent aldehyde dehydrogenase - none -
fig|6666666.67457.peg.1706 CDS gi|227860999|gb|ACLI01000059.1| 14716 14270 -1 - 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67457.peg.1707 CDS gi|227860999|gb|ACLI01000059.1| 14909 14724 -2 - 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67457.peg.1708 CDS gi|227860999|gb|ACLI01000059.1| 15548 14913 -2 - 636 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.67457.peg.1709 CDS gi|227860999|gb|ACLI01000059.1| 15993 15589 -3 - 405 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67457.peg.1710 CDS gi|227860999|gb|ACLI01000059.1| 16533 15997 -3 - 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67457.peg.1711 CDS gi|227860999|gb|ACLI01000059.1| 16950 16552 -3 - 399 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.67457.peg.1712 CDS gi|227860999|gb|ACLI01000059.1| 17286 17846 3 + 561 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67457.peg.1713 CDS gi|227860999|gb|ACLI01000059.1| 18015 17881 -3 - 135 hypothetical protein - none -
fig|6666666.67457.peg.1714 CDS gi|227860999|gb|ACLI01000059.1| 18139 19344 1 + 1206 FIG00544765: hypothetical protein - none -
fig|6666666.67457.peg.1715 CDS gi|227860999|gb|ACLI01000059.1| 19355 20428 2 + 1074 FIG00544538: hypothetical protein - none -
fig|6666666.67457.peg.1716 CDS gi|227860999|gb|ACLI01000059.1| 20487 21782 3 + 1296 Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.67457.peg.1717 CDS gi|227860999|gb|ACLI01000059.1| 21775 23553 1 + 1779 Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.67457.peg.1718 CDS gi|227860999|gb|ACLI01000059.1| 23550 24335 3 + 786 Substrate-specific component CbrT of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.67457.peg.1719 CDS gi|227860999|gb|ACLI01000059.1| 25634 24360 -2 - 1275 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67457.peg.1720 CDS gi|227860999|gb|ACLI01000059.1| 26358 25753 -3 - 606 hypothetical protein - none -
fig|6666666.67457.peg.1721 CDS gi|227860999|gb|ACLI01000059.1| 26756 28939 2 + 2184 Putative formate dehydrogenase oxidoreductase protein Formate hydrogenase
fig|6666666.67457.peg.1722 CDS gi|227860999|gb|ACLI01000059.1| 29032 29355 1 + 324 FIG00545055: hypothetical protein - none -
fig|6666666.67457.peg.1723 CDS gi|227860999|gb|ACLI01000059.1| 29356 30189 1 + 834 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67457.peg.1724 CDS gi|227860999|gb|ACLI01000059.1| 30200 31018 2 + 819 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67457.peg.1725 CDS gi|227860999|gb|ACLI01000059.1| 31976 31020 -2 - 957 FIG00544934: hypothetical protein - none -
fig|6666666.67457.peg.1726 CDS gi|227860999|gb|ACLI01000059.1| 32674 32102 -1 - 573 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67457.peg.1727 CDS gi|227860999|gb|ACLI01000059.1| 32988 32674 -3 - 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67457.peg.1728 CDS gi|227860999|gb|ACLI01000059.1| 33359 32991 -2 - 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67457.peg.1729 CDS gi|227860999|gb|ACLI01000059.1| 33701 34420 2 + 720 FIG00545133: hypothetical protein - none -
fig|6666666.67457.peg.1730 CDS gi|227860999|gb|ACLI01000059.1| 34815 34537 -3 - 279 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.67457.peg.1731 CDS gi|227860999|gb|ACLI01000059.1| 35048 34818 -2 - 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67457.peg.1732 CDS gi|227860999|gb|ACLI01000059.1| 35464 35048 -1 - 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67457.peg.1733 CDS gi|227860999|gb|ACLI01000059.1| 36213 35467 -3 - 747 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.67457.peg.1734 CDS gi|227860999|gb|ACLI01000059.1| 36575 36213 -2 - 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67457.peg.1735 CDS gi|227860999|gb|ACLI01000059.1| 36857 36579 -2 - 279 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.67457.peg.1736 CDS gi|227860999|gb|ACLI01000059.1| 37716 36874 -3 - 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67457.peg.1737 CDS gi|227860999|gb|ACLI01000059.1| 38046 37741 -3 - 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67457.peg.1738 CDS gi|227860999|gb|ACLI01000059.1| 38702 38046 -2 - 657 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67457.peg.1739 CDS gi|227860999|gb|ACLI01000059.1| 39355 38699 -1 - 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67457.peg.1740 CDS gi|227860999|gb|ACLI01000059.1| 39692 39387 -2 - 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.67457.peg.1741 CDS gi|227860999|gb|ACLI01000059.1| 41911 40403 -1 - 1509 putative coenzyme A transferase - none -
fig|6666666.67457.peg.1742 CDS gi|227861000|gb|ACLI01000058.1| 945 10 -3 - 936 FIG00546271: hypothetical protein - none -
fig|6666666.67457.peg.1743 CDS gi|227861000|gb|ACLI01000058.1| 1060 1251 1 + 192 hypothetical protein - none -
fig|6666666.67457.peg.1744 CDS gi|227861000|gb|ACLI01000058.1| 1640 1350 -2 - 291 FIG00544893: hypothetical protein - none -
fig|6666666.67457.peg.1745 CDS gi|227861000|gb|ACLI01000058.1| 2000 1680 -2 - 321 FIG00543840: hypothetical protein - none -
fig|6666666.67457.peg.1746 CDS gi|227861000|gb|ACLI01000058.1| 3164 2160 -2 - 1005 FIG00543916: hypothetical protein - none -
fig|6666666.67457.peg.1747 CDS gi|227861000|gb|ACLI01000058.1| 6970 3161 -1 - 3810 FtsK/SpoIIIE family protein - none -
fig|6666666.67457.peg.1748 CDS gi|227861000|gb|ACLI01000058.1| 7187 8572 2 + 1386 FIG00544388: hypothetical protein - none -
fig|6666666.67457.peg.1749 CDS gi|227861000|gb|ACLI01000058.1| 8632 9906 1 + 1275 subtilase family protein - none -
fig|6666666.67457.peg.1750 CDS gi|227861000|gb|ACLI01000058.1| 11730 10474 -3 - 1257 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.1751 CDS gi|227861000|gb|ACLI01000058.1| 14242 11861 -1 - 2382 FIG00546597: hypothetical protein - none -
fig|6666666.67457.peg.1752 CDS gi|227861000|gb|ACLI01000058.1| 15179 14331 -2 - 849 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67457.peg.1753 CDS gi|227861000|gb|ACLI01000058.1| 15966 15151 -3 - 816 hypothetical protein - none -
fig|6666666.67457.peg.1754 CDS gi|227861000|gb|ACLI01000058.1| 16658 16104 -2 - 555 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67457.peg.1755 CDS gi|227861000|gb|ACLI01000058.1| 17729 16713 -2 - 1017 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67457.peg.1756 CDS gi|227861000|gb|ACLI01000058.1| 18444 17839 -3 - 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.67457.peg.1757 CDS gi|227861000|gb|ACLI01000058.1| 18664 18467 -1 - 198 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.67457.peg.1758 CDS gi|227861000|gb|ACLI01000058.1| 19243 18875 -1 - 369 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.67457.peg.1759 CDS gi|227861000|gb|ACLI01000058.1| 19587 19429 -3 - 159 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67457.peg.1760 CDS gi|227861000|gb|ACLI01000058.1| 20307 19984 -3 - 324 Putative secreted protein - none -
fig|6666666.67457.peg.1761 CDS gi|227861001|gb|ACLI01000057.1| 547 759 1 + 213 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.67457.peg.1762 CDS gi|227861001|gb|ACLI01000057.1| 816 2375 3 + 1560 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67457.peg.1763 CDS gi|227861001|gb|ACLI01000057.1| 4041 2428 -3 - 1614 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67457.peg.1764 CDS gi|227861001|gb|ACLI01000057.1| 4352 4053 -2 - 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67457.peg.1765 CDS gi|227861001|gb|ACLI01000057.1| 6353 4545 -2 - 1809 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67457.peg.1766 CDS gi|227861001|gb|ACLI01000057.1| 7407 6373 -3 - 1035 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.67457.peg.1767 CDS gi|227861001|gb|ACLI01000057.1| 7958 7431 -2 - 528 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Ribosome biogenesis bacterial
fig|6666666.67457.peg.1768 CDS gi|227861001|gb|ACLI01000057.1| 8629 7955 -1 - 675 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.67457.peg.1769 CDS gi|227861001|gb|ACLI01000057.1| 9922 8636 -1 - 1287 putative aminopeptidase - none -
fig|6666666.67457.peg.1770 CDS gi|227861001|gb|ACLI01000057.1| 11625 10033 -3 - 1593 putative transport protein - none -
fig|6666666.67457.peg.1771 CDS gi|227861001|gb|ACLI01000057.1| 12328 11825 -1 - 504 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67457.peg.1772 CDS gi|227861001|gb|ACLI01000057.1| 13428 12325 -3 - 1104 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67457.peg.1773 CDS gi|227861001|gb|ACLI01000057.1| 13427 14422 2 + 996 FIG00545792: hypothetical protein - none -
fig|6666666.67457.peg.1774 CDS gi|227861001|gb|ACLI01000057.1| 14649 14449 -3 - 201 FIG00546731: hypothetical protein - none -
fig|6666666.67457.peg.1775 CDS gi|227861001|gb|ACLI01000057.1| 16097 14703 -2 - 1395 hypothetical protein - none -
fig|6666666.67457.peg.1776 CDS gi|227861001|gb|ACLI01000057.1| 16405 16094 -1 - 312 FIG00544418: hypothetical protein - none -
fig|6666666.67457.peg.1777 CDS gi|227861001|gb|ACLI01000057.1| 17847 16495 -3 - 1353 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67457.peg.1778 CDS gi|227861001|gb|ACLI01000057.1| 18567 18019 -3 - 549 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.67457.peg.1779 CDS gi|227861001|gb|ACLI01000057.1| 19010 18567 -2 - 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67457.peg.1780 CDS gi|227861002|gb|ACLI01000056.1| 36 671 3 + 636 FIG00543896: hypothetical protein - none -
fig|6666666.67457.peg.1781 CDS gi|227861002|gb|ACLI01000056.1| 1178 4315 2 + 3138 hypothetical protein - none -
fig|6666666.67457.peg.1782 CDS gi|227861002|gb|ACLI01000056.1| 4799 4416 -2 - 384 FIG00548619: hypothetical protein - none -
fig|6666666.67457.peg.1783 CDS gi|227861002|gb|ACLI01000056.1| 6446 4953 -2 - 1494 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) GMP synthase;
GMP synthase;
Purine conversions;
Purine conversions;
Purine salvage cluster;
Purine salvage cluster
fig|6666666.67457.peg.1784 CDS gi|227861002|gb|ACLI01000056.1| 7172 6651 -2 - 522 FIG00548233: hypothetical protein - none -
fig|6666666.67457.peg.1785 CDS gi|227861002|gb|ACLI01000056.1| 9413 7611 -2 - 1803 putative monooxygenase protein - none -
fig|6666666.67457.peg.1786 CDS gi|227861002|gb|ACLI01000056.1| 11046 9652 -3 - 1395 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.67457.peg.1787 CDS gi|227861002|gb|ACLI01000056.1| 12693 11527 -3 - 1167 Inosine-5@1-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67457.peg.1788 CDS gi|227861002|gb|ACLI01000056.1| 14359 12839 -1 - 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67457.peg.1789 CDS gi|227861002|gb|ACLI01000056.1| 14520 14894 3 + 375 FIG00544572: hypothetical protein - none -
fig|6666666.67457.peg.1790 CDS gi|227861002|gb|ACLI01000056.1| 16011 14965 -3 - 1047 FIG00544252: hypothetical protein - none -
fig|6666666.67457.peg.1791 CDS gi|227861002|gb|ACLI01000056.1| 16499 16011 -2 - 489 putative RNA polymerase sigma factor - none -
fig|6666666.67457.peg.1792 CDS gi|227861003|gb|ACLI01000055.1| 97 774 1 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67457.peg.1793 CDS gi|227861003|gb|ACLI01000055.1| 3296 918 -2 - 2379 DNA polymerase IV-like protein ImuB DNA repair, bacterial;
DNA replication strays
fig|6666666.67457.peg.1794 CDS gi|227861003|gb|ACLI01000055.1| 3999 3277 -3 - 723 FIG00544716: hypothetical protein - none -
fig|6666666.67457.peg.1795 CDS gi|227861003|gb|ACLI01000055.1| 5647 4187 -1 - 1461 hypothetical protein - none -
fig|6666666.67457.peg.1796 CDS gi|227861003|gb|ACLI01000055.1| 6030 6338 3 + 309 hypothetical membrane protein - none -
fig|6666666.67457.peg.1797 CDS gi|227861003|gb|ACLI01000055.1| 6719 6411 -2 - 309 FIG00545838: hypothetical protein - none -
fig|6666666.67457.peg.1798 CDS gi|227861003|gb|ACLI01000055.1| 7402 6719 -1 - 684 two-component system response regulator - none -
fig|6666666.67457.peg.1799 CDS gi|227861003|gb|ACLI01000055.1| 7548 8663 3 + 1116 hypothetical protein - none -
fig|6666666.67457.peg.1800 CDS gi|227861003|gb|ACLI01000055.1| 8666 8797 2 + 132 hypothetical protein - none -
fig|6666666.67457.peg.1801 CDS gi|227861003|gb|ACLI01000055.1| 8797 9756 1 + 960 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67457.peg.1802 CDS gi|227861003|gb|ACLI01000055.1| 10945 9740 -1 - 1206 FIG00545356: hypothetical protein - none -
fig|6666666.67457.peg.1803 CDS gi|227861004|gb|ACLI01000054.1| 37 540 1 + 504 acyltransferase 3 - none -
fig|6666666.67457.peg.1804 CDS gi|227861004|gb|ACLI01000054.1| 1031 552 -2 - 480 FIG00544661: hypothetical protein - none -
fig|6666666.67457.peg.1805 CDS gi|227861004|gb|ACLI01000054.1| 1751 1113 -2 - 639 hypothetical protein - none -
fig|6666666.67457.peg.1806 CDS gi|227861004|gb|ACLI01000054.1| 2570 1824 -2 - 747 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67457.peg.1807 CDS gi|227861004|gb|ACLI01000054.1| 2748 3620 3 + 873 FIG00545808: hypothetical protein - none -
fig|6666666.67457.peg.1808 CDS gi|227861004|gb|ACLI01000054.1| 4442 3771 -2 - 672 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67457.peg.1809 CDS gi|227861004|gb|ACLI01000054.1| 5979 4447 -3 - 1533 transmembrane protein, distant homology with ydbT - none -
fig|6666666.67457.peg.1810 CDS gi|227861004|gb|ACLI01000054.1| 6467 5976 -2 - 492 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.67457.peg.1811 CDS gi|227861004|gb|ACLI01000054.1| 7312 6515 -1 - 798 cell wall biogenesis glycosyltransferase - none -
fig|6666666.67457.peg.1812 CDS gi|227861004|gb|ACLI01000054.1| 7402 8832 1 + 1431 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase;
EC699-706
fig|6666666.67457.peg.1813 CDS gi|227861004|gb|ACLI01000054.1| 10387 8825 -1 - 1563 Predicted nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.67457.peg.1814 CDS gi|227861004|gb|ACLI01000054.1| 10541 11191 2 + 651 FIG00547498: hypothetical protein - none -
fig|6666666.67457.peg.1815 CDS gi|227861004|gb|ACLI01000054.1| 11890 11261 -1 - 630 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.1816 CDS gi|227861004|gb|ACLI01000054.1| 12095 13219 2 + 1125 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67457.peg.1817 CDS gi|227861004|gb|ACLI01000054.1| 13268 15532 2 + 2265 FIG00545392: hypothetical protein - none -
fig|6666666.67457.peg.1818 CDS gi|227861004|gb|ACLI01000054.1| 15529 16455 1 + 927 Phytoene synthase (EC 2.5.1.32) Carotenoids;
Protein deglycation
fig|6666666.67457.peg.1819 CDS gi|227861004|gb|ACLI01000054.1| 16458 18074 3 + 1617 Phytoene dehydrogenase (EC 1.14.99.-) Carotenoids;
Protein deglycation
fig|6666666.67457.peg.1820 CDS gi|227861004|gb|ACLI01000054.1| 18079 18477 1 + 399 C50 carotenoid epsilon cyclase Carotenoids
fig|6666666.67457.peg.1821 CDS gi|227861004|gb|ACLI01000054.1| 18474 18815 3 + 342 C50 carotenoid epsilon cyclase Carotenoids
fig|6666666.67457.peg.1822 CDS gi|227861004|gb|ACLI01000054.1| 18822 19685 3 + 864 Lycopene elongase (EC 2.5.1.-) Carotenoids
fig|6666666.67457.peg.1823 CDS gi|227861004|gb|ACLI01000054.1| 21134 19785 -2 - 1350 vannilate transporter VanK - none -
fig|6666666.67457.peg.1824 CDS gi|227861004|gb|ACLI01000054.1| 22204 21146 -1 - 1059 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) Anaerobic respiratory reductases;
Anaerobic respiratory reductases
fig|6666666.67457.peg.1825 CDS gi|227861004|gb|ACLI01000054.1| 23343 22204 -3 - 1140 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) - none -
fig|6666666.67457.peg.1826 CDS gi|227861004|gb|ACLI01000054.1| 23606 24181 2 + 576 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67457.peg.1827 CDS gi|227861004|gb|ACLI01000054.1| 27418 24200 -1 - 3219 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) DNA replication strays
fig|6666666.67457.peg.1828 CDS gi|227861004|gb|ACLI01000054.1| 27585 28475 3 + 891 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67457.peg.1829 CDS gi|227861005|gb|ACLI01000053.1| 1284 808 -3 - 477 FIG00545249: hypothetical protein - none -
fig|6666666.67457.peg.1830 CDS gi|227861005|gb|ACLI01000053.1| 2128 1310 -1 - 819 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.67457.peg.1831 CDS gi|227861005|gb|ACLI01000053.1| 2418 2134 -3 - 285 hypothetical protein - none -
fig|6666666.67457.peg.1832 CDS gi|227861005|gb|ACLI01000053.1| 2553 4184 3 + 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67457.peg.1833 CDS gi|227861005|gb|ACLI01000053.1| 4676 6289 2 + 1614 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67457.peg.1834 CDS gi|227861005|gb|ACLI01000053.1| 6365 6604 2 + 240 FIG00544173: hypothetical protein - none -
fig|6666666.67457.peg.1835 CDS gi|227861005|gb|ACLI01000053.1| 6687 7280 3 + 594 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67457.peg.1836 CDS gi|227861005|gb|ACLI01000053.1| 7280 8128 2 + 849 hypothetical protein - none -
fig|6666666.67457.peg.1837 CDS gi|227861005|gb|ACLI01000053.1| 10236 8125 -3 - 2112 hypothetical protein - none -
fig|6666666.67457.peg.1838 CDS gi|227861005|gb|ACLI01000053.1| 10304 10726 2 + 423 FIG00547406: hypothetical protein - none -
fig|6666666.67457.peg.1839 CDS gi|227861005|gb|ACLI01000053.1| 10872 12080 3 + 1209 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67457.peg.1840 CDS gi|227861005|gb|ACLI01000053.1| 13256 12141 -2 - 1116 permease of the major facilitator superfamily - none -
fig|6666666.67457.peg.1841 CDS gi|227861005|gb|ACLI01000053.1| 14544 13282 -3 - 1263 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.67457.peg.1842 CDS gi|227861005|gb|ACLI01000053.1| 14856 16037 3 + 1182 TRAP transporter solute receptor, TAXI family precursor, unknown substrate 2 TRAP Transporter unknown substrate 2
fig|6666666.67457.peg.1843 CDS gi|227861005|gb|ACLI01000053.1| 16055 18208 2 + 2154 TRAP transporter, 4TM/12TM fusion protein, unknown substrate 2 TRAP Transporter unknown substrate 2
fig|6666666.67457.peg.1844 CDS gi|227861005|gb|ACLI01000053.1| 19177 18239 -1 - 939 putative transcription regulator - none -
fig|6666666.67457.peg.1845 CDS gi|227861005|gb|ACLI01000053.1| 19361 19224 -2 - 138 hypothetical protein - none -
fig|6666666.67457.peg.1846 CDS gi|227861005|gb|ACLI01000053.1| 19326 20540 3 + 1215 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) - none -
fig|6666666.67457.peg.1847 CDS gi|227861005|gb|ACLI01000053.1| 20548 20964 1 + 417 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) - none -
fig|6666666.67457.peg.1848 CDS gi|227861005|gb|ACLI01000053.1| 21004 22236 1 + 1233 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.67457.peg.1849 CDS gi|227861005|gb|ACLI01000053.1| 22270 24516 1 + 2247 Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.1850 CDS gi|227861005|gb|ACLI01000053.1| 25679 24603 -2 - 1077 FIG00548218: hypothetical protein - none -
fig|6666666.67457.peg.1851 CDS gi|227861005|gb|ACLI01000053.1| 26112 26897 3 + 786 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67457.peg.1852 CDS gi|227861005|gb|ACLI01000053.1| 27226 29001 1 + 1776 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67457.peg.1853 CDS gi|227861005|gb|ACLI01000053.1| 29126 29512 2 + 387 FIG00547727: hypothetical protein - none -
fig|6666666.67457.peg.1854 CDS gi|227861005|gb|ACLI01000053.1| 30678 29530 -3 - 1149 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67457.peg.1855 CDS gi|227861005|gb|ACLI01000053.1| 31615 30707 -1 - 909 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67457.peg.1856 CDS gi|227861005|gb|ACLI01000053.1| 33120 31612 -3 - 1509 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67457.peg.1857 CDS gi|227861005|gb|ACLI01000053.1| 33506 34384 2 + 879 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Urea decomposition
fig|6666666.67457.peg.1858 CDS gi|227861005|gb|ACLI01000053.1| 34388 35104 2 + 717 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Urea decomposition
fig|6666666.67457.peg.1859 CDS gi|227861005|gb|ACLI01000053.1| 35139 38747 3 + 3609 Urea carboxylase (EC 6.3.4.6) Urea carboxylase and Allophanate hydrolase cluster;
Urea decomposition
fig|6666666.67457.peg.1860 CDS gi|227861005|gb|ACLI01000053.1| 39690 38821 -3 - 870 hypothetical protein - none -
fig|6666666.67457.peg.1861 CDS gi|227861005|gb|ACLI01000053.1| 39920 41683 2 + 1764 Urea carboxylase-related amino acid permease Niacin-Choline transport and metabolism;
Urea decomposition
fig|6666666.67457.peg.1862 CDS gi|227861005|gb|ACLI01000053.1| 41723 43510 2 + 1788 Allophanate hydrolase (EC 3.5.1.54) Urea carboxylase and Allophanate hydrolase cluster;
Urea decomposition
fig|6666666.67457.peg.1863 CDS gi|227861005|gb|ACLI01000053.1| 47012 43593 -2 - 3420 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67457.peg.1864 CDS gi|227861005|gb|ACLI01000053.1| 48860 47448 -2 - 1413 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.67457.peg.1865 CDS gi|227861005|gb|ACLI01000053.1| 50190 49003 -3 - 1188 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67457.peg.1866 CDS gi|227861005|gb|ACLI01000053.1| 50296 51888 1 + 1593 putative phospho-sugar mutase - none -
fig|6666666.67457.peg.1867 CDS gi|227861005|gb|ACLI01000053.1| 52301 51885 -2 - 417 predicted transcriptional regulator - none -
fig|6666666.67457.peg.1868 CDS gi|227861005|gb|ACLI01000053.1| 52992 52348 -3 - 645 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67457.peg.1869 CDS gi|227861005|gb|ACLI01000053.1| 53160 53441 3 + 282 hypothetical protein - none -
fig|6666666.67457.peg.1870 CDS gi|227861005|gb|ACLI01000053.1| 53438 54403 2 + 966 FIG00544549: hypothetical protein - none -
fig|6666666.67457.peg.1871 CDS gi|227861005|gb|ACLI01000053.1| 54482 55711 2 + 1230 FIG026501: hypothetical protein - none -
fig|6666666.67457.peg.1872 CDS gi|227861005|gb|ACLI01000053.1| 55808 57109 2 + 1302 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.1873 CDS gi|227861005|gb|ACLI01000053.1| 58030 57113 -1 - 918 FIG00545198: hypothetical protein - none -
fig|6666666.67457.peg.1874 CDS gi|227861005|gb|ACLI01000053.1| 59198 58113 -2 - 1086 putative membrane protein - none -
fig|6666666.67457.peg.1875 CDS gi|227861005|gb|ACLI01000053.1| 60417 59377 -3 - 1041 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67457.peg.1876 CDS gi|227861005|gb|ACLI01000053.1| 60648 61619 3 + 972 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.1877 CDS gi|227861005|gb|ACLI01000053.1| 61616 62410 2 + 795 ABC-type transporter, ATPase component - none -
fig|6666666.67457.peg.1878 CDS gi|227861005|gb|ACLI01000053.1| 62434 63441 1 + 1008 FIG00548792: hypothetical protein - none -
fig|6666666.67457.peg.1879 CDS gi|227861005|gb|ACLI01000053.1| 63805 63614 -1 - 192 FIG00544199: hypothetical protein - none -
fig|6666666.67457.peg.1880 CDS gi|227861005|gb|ACLI01000053.1| 64619 63954 -2 - 666 FIG00544233: hypothetical protein - none -
fig|6666666.67457.peg.1881 CDS gi|227861005|gb|ACLI01000053.1| 65577 64621 -3 - 957 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67457.peg.1882 CDS gi|227861005|gb|ACLI01000053.1| 66833 65595 -2 - 1239 putative transport protein - none -
fig|6666666.67457.peg.1883 CDS gi|227861005|gb|ACLI01000053.1| 67044 68090 3 + 1047 Iron compound ABC uptake transporter substrate-binding protein PiaA - none -
fig|6666666.67457.peg.1884 CDS gi|227861005|gb|ACLI01000053.1| 68097 69095 3 + 999 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.1885 CDS gi|227861005|gb|ACLI01000053.1| 69092 70114 2 + 1023 ABC-type transporter, permease component - none -
fig|6666666.67457.peg.1886 CDS gi|227861005|gb|ACLI01000053.1| 70119 70937 3 + 819 putative iron transporter ATP-binding protein - none -
fig|6666666.67457.peg.1887 CDS gi|227861005|gb|ACLI01000053.1| 70934 71848 2 + 915 FIG00544109: hypothetical protein - none -
fig|6666666.67457.peg.1888 CDS gi|227861005|gb|ACLI01000053.1| 71933 74122 2 + 2190 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.67457.peg.1889 CDS gi|227861005|gb|ACLI01000053.1| 74177 74962 2 + 786 FIG00547148: hypothetical protein - none -
fig|6666666.67457.peg.1890 CDS gi|227861005|gb|ACLI01000053.1| 75473 76789 2 + 1317 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67457.peg.1891 CDS gi|227861005|gb|ACLI01000053.1| 77022 78155 3 + 1134 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67457.peg.1892 CDS gi|227861005|gb|ACLI01000053.1| 80391 78274 -3 - 2118 Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Aromatic Amin Catabolism
fig|6666666.67457.peg.1893 CDS gi|227861005|gb|ACLI01000053.1| 80535 80927 3 + 393 FIG00548554: hypothetical protein - none -
fig|6666666.67457.peg.1894 CDS gi|227861005|gb|ACLI01000053.1| 81808 80924 -1 - 885 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.1895 CDS gi|227861005|gb|ACLI01000053.1| 82624 81824 -1 - 801 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.1896 CDS gi|227861005|gb|ACLI01000053.1| 83874 82669 -3 - 1206 Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.1897 CDS gi|227861005|gb|ACLI01000053.1| 84722 83952 -2 - 771 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.1898 CDS gi|227861005|gb|ACLI01000053.1| 85951 84800 -1 - 1152 Phenylacetate-CoA oxygenase/reductase, PaaK subunit - none -
fig|6666666.67457.peg.1899 CDS gi|227861005|gb|ACLI01000053.1| 86493 85951 -3 - 543 Phenylacetate-CoA oxygenase, PaaJ subunit - none -
fig|6666666.67457.peg.1900 CDS gi|227861005|gb|ACLI01000053.1| 87375 86539 -3 - 837 Phenylacetate-CoA oxygenase, PaaI subunit - none -
fig|6666666.67457.peg.1901 CDS gi|227861005|gb|ACLI01000053.1| 87659 87372 -2 - 288 Phenylacetate-CoA oxygenase, PaaH subunit - none -
fig|6666666.67457.peg.1902 CDS gi|227861005|gb|ACLI01000053.1| 88664 87687 -2 - 978 Phenylacetate-CoA oxygenase, PaaG subunit - none -
fig|6666666.67457.peg.1903 CDS gi|227861005|gb|ACLI01000053.1| 89371 88922 -1 - 450 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.67457.peg.1904 CDS gi|227861005|gb|ACLI01000053.1| 89526 90131 3 + 606 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.1905 CDS gi|227861005|gb|ACLI01000053.1| 90447 91757 3 + 1311 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) - none -
fig|6666666.67457.peg.1906 CDS gi|227861005|gb|ACLI01000053.1| 92006 93406 2 + 1401 Transporter, MFS superfamily - none -
fig|6666666.67457.peg.1907 CDS gi|227861005|gb|ACLI01000053.1| 93763 94584 1 + 822 hypothetical protein - none -
fig|6666666.67457.peg.1908 CDS gi|227861005|gb|ACLI01000053.1| 94908 94570 -3 - 339 FIG00546438: hypothetical protein - none -
fig|6666666.67457.peg.1909 CDS gi|227861005|gb|ACLI01000053.1| 95812 94922 -1 - 891 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67457.peg.1910 CDS gi|227861005|gb|ACLI01000053.1| 95811 96284 3 + 474 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) ## TrmL RNA methylation
fig|6666666.67457.peg.1911 CDS gi|227861006|gb|ACLI01000052.1| 147 1196 3 + 1050 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.1912 CDS gi|227861006|gb|ACLI01000052.1| 1193 2773 2 + 1581 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.1913 CDS gi|227861006|gb|ACLI01000052.1| 2773 3663 1 + 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.1914 CDS gi|227861006|gb|ACLI01000052.1| 4361 3840 -2 - 522 hypothetical protein - none -
fig|6666666.67457.peg.1915 CDS gi|227861006|gb|ACLI01000052.1| 4496 4813 2 + 318 blasticidin S deaminase, putative - none -
fig|6666666.67457.peg.1916 CDS gi|227861006|gb|ACLI01000052.1| 7195 6851 -1 - 345 hypothetical protein - none -
fig|6666666.67457.peg.1917 CDS gi|227861006|gb|ACLI01000052.1| 7574 7173 -2 - 402 hypothetical protein - none -
fig|6666666.67457.peg.1918 CDS gi|227861006|gb|ACLI01000052.1| 7898 7635 -2 - 264 hypothetical protein - none -
fig|6666666.67457.peg.1919 CDS gi|227861006|gb|ACLI01000052.1| 9390 7891 -3 - 1500 hypothetical protein - none -
fig|6666666.67457.peg.1920 CDS gi|227861006|gb|ACLI01000052.1| 9605 9465 -2 - 141 hypothetical protein - none -
fig|6666666.67457.peg.1921 CDS gi|227861006|gb|ACLI01000052.1| 11950 9674 -1 - 2277 hypothetical protein - none -
fig|6666666.67457.peg.1922 CDS gi|227861006|gb|ACLI01000052.1| 12813 11995 -3 - 819 hypothetical protein - none -
fig|6666666.67457.peg.1923 CDS gi|227861006|gb|ACLI01000052.1| 13384 12803 -1 - 582 hypothetical protein - none -
fig|6666666.67457.peg.1924 CDS gi|227861006|gb|ACLI01000052.1| 15000 13381 -3 - 1620 hypothetical protein - none -
fig|6666666.67457.peg.1925 CDS gi|227861006|gb|ACLI01000052.1| 15810 15010 -3 - 801 hypothetical protein - none -
fig|6666666.67457.peg.1926 CDS gi|227861006|gb|ACLI01000052.1| 20457 15826 -3 - 4632 FIG00549867: hypothetical protein - none -
fig|6666666.67457.peg.1927 CDS gi|227861006|gb|ACLI01000052.1| 20701 20471 -1 - 231 hypothetical protein - none -
fig|6666666.67457.peg.1928 CDS gi|227861006|gb|ACLI01000052.1| 21150 20824 -3 - 327 hypothetical protein - none -
fig|6666666.67457.peg.1929 CDS gi|227861006|gb|ACLI01000052.1| 21452 21165 -2 - 288 hypothetical protein - none -
fig|6666666.67457.peg.1930 CDS gi|227861006|gb|ACLI01000052.1| 22174 21452 -1 - 723 hypothetical protein - none -
fig|6666666.67457.peg.1931 CDS gi|227861006|gb|ACLI01000052.1| 22584 22174 -3 - 411 hypothetical protein - none -
fig|6666666.67457.peg.1932 CDS gi|227861006|gb|ACLI01000052.1| 22861 22565 -1 - 297 hypothetical protein - none -
fig|6666666.67457.peg.1933 CDS gi|227861006|gb|ACLI01000052.1| 23178 22861 -3 - 318 hypothetical protein - none -
fig|6666666.67457.peg.1934 CDS gi|227861006|gb|ACLI01000052.1| 23609 23178 -2 - 432 hypothetical protein - none -
fig|6666666.67457.peg.1935 CDS gi|227861006|gb|ACLI01000052.1| 24010 23624 -1 - 387 hypothetical protein - none -
fig|6666666.67457.peg.1936 CDS gi|227861006|gb|ACLI01000052.1| 24939 24010 -3 - 930 hypothetical protein - none -
fig|6666666.67457.peg.1937 CDS gi|227861006|gb|ACLI01000052.1| 25343 24951 -2 - 393 hypothetical protein - none -
fig|6666666.67457.peg.1938 CDS gi|227861006|gb|ACLI01000052.1| 26637 25348 -3 - 1290 hypothetical protein - none -
fig|6666666.67457.peg.1939 CDS gi|227861006|gb|ACLI01000052.1| 27935 26634 -2 - 1302 Phage protein - none -
fig|6666666.67457.peg.1940 CDS gi|227861006|gb|ACLI01000052.1| 29542 27950 -1 - 1593 phage terminase, large subunit, putative - none -
fig|6666666.67457.peg.1941 CDS gi|227861006|gb|ACLI01000052.1| 29798 29496 -2 - 303 hypothetical protein - none -
fig|6666666.67457.peg.1942 CDS gi|227861006|gb|ACLI01000052.1| 31230 30022 -3 - 1209 Phage protein - none -
fig|6666666.67457.peg.1943 CDS gi|227861006|gb|ACLI01000052.1| 33234 31969 -3 - 1266 No significant database matches - none -
fig|6666666.67457.peg.1944 CDS gi|227861006|gb|ACLI01000052.1| 33472 33290 -1 - 183 hypothetical protein - none -
fig|6666666.67457.peg.1945 CDS gi|227861006|gb|ACLI01000052.1| 33678 33469 -3 - 210 hypothetical protein - none -
fig|6666666.67457.peg.1946 CDS gi|227861006|gb|ACLI01000052.1| 34612 34211 -1 - 402 hypothetical protein - none -
fig|6666666.67457.peg.1947 CDS gi|227861006|gb|ACLI01000052.1| 35507 35181 -2 - 327 hypothetical protein - none -
fig|6666666.67457.peg.1948 CDS gi|227861006|gb|ACLI01000052.1| 35819 35520 -2 - 300 hypothetical protein - none -
fig|6666666.67457.peg.1949 CDS gi|227861006|gb|ACLI01000052.1| 35983 35819 -1 - 165 hypothetical protein - none -
fig|6666666.67457.peg.1950 CDS gi|227861006|gb|ACLI01000052.1| 36308 36024 -2 - 285 hypothetical protein - none -
fig|6666666.67457.peg.1951 CDS gi|227861006|gb|ACLI01000052.1| 37150 36317 -1 - 834 hypothetical protein - none -
fig|6666666.67457.peg.1952 CDS gi|227861006|gb|ACLI01000052.1| 37799 37278 -2 - 522 Phage antirepressor protein - none -
fig|6666666.67457.peg.1953 CDS gi|227861006|gb|ACLI01000052.1| 38281 38063 -1 - 219 hypothetical protein - none -
fig|6666666.67457.peg.1954 CDS gi|227861006|gb|ACLI01000052.1| 38599 38721 1 + 123 hypothetical protein - none -
fig|6666666.67457.peg.1955 CDS gi|227861006|gb|ACLI01000052.1| 39053 38814 -2 - 240 hypothetical protein - none -
fig|6666666.67457.peg.1956 CDS gi|227861006|gb|ACLI01000052.1| 39457 39146 -1 - 312 hypothetical protein - none -
fig|6666666.67457.peg.1957 CDS gi|227861006|gb|ACLI01000052.1| 39696 39475 -3 - 222 hypothetical protein - none -
fig|6666666.67457.peg.1958 CDS gi|227861006|gb|ACLI01000052.1| 41308 41457 1 + 150 hypothetical protein - none -
fig|6666666.67457.peg.1959 CDS gi|227861006|gb|ACLI01000052.1| 42203 42009 -2 - 195 hypothetical protein - none -
fig|6666666.67457.peg.1960 CDS gi|227861006|gb|ACLI01000052.1| 42343 42522 1 + 180 hypothetical protein - none -
fig|6666666.67457.peg.1961 CDS gi|227861006|gb|ACLI01000052.1| 42674 43309 2 + 636 hypothetical protein - none -
fig|6666666.67457.peg.1962 CDS gi|227861006|gb|ACLI01000052.1| 45024 43759 -3 - 1266 putative integrase - none -
fig|6666666.67457.peg.1963 CDS gi|227861006|gb|ACLI01000052.1| 46010 45651 -2 - 360 FIG016027: protein of unknown function YeaO - none -
fig|6666666.67457.peg.1964 CDS gi|227861006|gb|ACLI01000052.1| 46504 46010 -1 - 495 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67457.peg.1965 CDS gi|227861006|gb|ACLI01000052.1| 47443 46541 -1 - 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67457.peg.1966 CDS gi|227861006|gb|ACLI01000052.1| 48148 47459 -1 - 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67457.peg.1967 CDS gi|227861006|gb|ACLI01000052.1| 49340 48237 -2 - 1104 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67457.peg.1968 CDS gi|227861006|gb|ACLI01000052.1| 49406 50281 2 + 876 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67457.peg.1969 CDS gi|227861006|gb|ACLI01000052.1| 50288 51073 2 + 786 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67457.peg.1970 CDS gi|227861006|gb|ACLI01000052.1| 52299 51181 -3 - 1119 No significant database matches - none -
fig|6666666.67457.peg.1971 CDS gi|227861006|gb|ACLI01000052.1| 52839 52477 -3 - 363 Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67457.peg.1972 CDS gi|227861006|gb|ACLI01000052.1| 53108 52857 -2 - 252 Clusters with Methylmalonyl-CoA carboxyltransferase (EC 2.1.3.1) - none -
fig|6666666.67457.peg.1973 CDS gi|227861006|gb|ACLI01000052.1| 54659 53121 -2 - 1539 Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67457.peg.1974 CDS gi|227861006|gb|ACLI01000052.1| 56114 54687 -2 - 1428 Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67457.peg.1975 CDS gi|227861006|gb|ACLI01000052.1| 56714 56860 2 + 147 hypothetical protein - none -
fig|6666666.67457.peg.1976 CDS gi|227861006|gb|ACLI01000052.1| 60335 57345 -2 - 2991 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67457.peg.1977 CDS gi|227861006|gb|ACLI01000052.1| 60436 60963 1 + 528 FIG129854: hypothetical protein - none -
fig|6666666.67457.peg.1978 CDS gi|227861006|gb|ACLI01000052.1| 61048 61737 1 + 690 FIG00544133: hypothetical protein - none -
fig|6666666.67457.peg.1979 CDS gi|227861006|gb|ACLI01000052.1| 62800 61748 -1 - 1053 Lon-like protease with PDZ domain CBSS-269801.1.peg.1715
fig|6666666.67457.peg.1980 CDS gi|227861006|gb|ACLI01000052.1| 62886 64328 3 + 1443 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67457.peg.1981 CDS gi|227861006|gb|ACLI01000052.1| 64709 64344 -2 - 366 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67457.peg.1982 CDS gi|227861006|gb|ACLI01000052.1| 64675 65703 1 + 1029 FIG00544187: hypothetical protein - none -
fig|6666666.67457.peg.1983 CDS gi|227861006|gb|ACLI01000052.1| 65791 66909 1 + 1119 hypothetical protein - none -
fig|6666666.67457.peg.1984 CDS gi|227861006|gb|ACLI01000052.1| 68949 66916 -3 - 2034 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67457.peg.1985 CDS gi|227861006|gb|ACLI01000052.1| 69695 68976 -2 - 720 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67457.peg.1986 CDS gi|227861006|gb|ACLI01000052.1| 70756 69695 -1 - 1062 Potassium channel protein Potassium homeostasis
fig|6666666.67457.peg.1987 CDS gi|227861006|gb|ACLI01000052.1| 74031 70783 -3 - 3249 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67457.peg.1988 CDS gi|227861006|gb|ACLI01000052.1| 77098 74024 -1 - 3075 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67457.peg.1989 CDS gi|227861006|gb|ACLI01000052.1| 77865 77101 -3 - 765 FIG00544868: hypothetical protein - none -
fig|6666666.67457.peg.1990 CDS gi|227861006|gb|ACLI01000052.1| 78758 77889 -2 - 870 FIG00544386: hypothetical protein - none -
fig|6666666.67457.peg.1991 CDS gi|227861006|gb|ACLI01000052.1| 79004 78777 -2 - 228 FIG00543928: hypothetical protein - none -
fig|6666666.67457.peg.1992 CDS gi|227861006|gb|ACLI01000052.1| 79073 80347 2 + 1275 putative ATP-dependent RNA helicase - none -
fig|6666666.67457.peg.1993 CDS gi|227861006|gb|ACLI01000052.1| 80351 81556 2 + 1206 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67457.peg.1994 CDS gi|227861006|gb|ACLI01000052.1| 81971 81570 -2 - 402 FIG00543921: hypothetical protein - none -
fig|6666666.67457.peg.1995 CDS gi|227861006|gb|ACLI01000052.1| 82557 82817 3 + 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67457.peg.1996 CDS gi|227861006|gb|ACLI01000052.1| 84080 83454 -2 - 627 putative RNA polymerase sigma factor - none -
fig|6666666.67457.peg.1997 CDS gi|227861006|gb|ACLI01000052.1| 84252 85373 3 + 1122 FIG00544692: hypothetical protein - none -
fig|6666666.67457.peg.1998 CDS gi|227861006|gb|ACLI01000052.1| 85993 85370 -1 - 624 FIG00543821: hypothetical protein - none -
fig|6666666.67457.peg.1999 CDS gi|227861006|gb|ACLI01000052.1| 86091 87317 3 + 1227 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67457.peg.2000 CDS gi|227861006|gb|ACLI01000052.1| 87415 88299 1 + 885 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.67457.peg.2001 CDS gi|227861006|gb|ACLI01000052.1| 88802 88296 -2 - 507 FIG00544397: hypothetical protein - none -
fig|6666666.67457.peg.2002 CDS gi|227861006|gb|ACLI01000052.1| 89185 88805 -1 - 381 FIG00996758: hypothetical protein - none -
fig|6666666.67457.peg.2003 CDS gi|227861006|gb|ACLI01000052.1| 89342 89722 2 + 381 FIG00544280: hypothetical protein - none -
fig|6666666.67457.peg.2004 CDS gi|227861006|gb|ACLI01000052.1| 92270 89733 -2 - 2538 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67457.peg.2005 CDS gi|227861006|gb|ACLI01000052.1| 93084 92407 -3 - 678 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67457.peg.2006 CDS gi|227861006|gb|ACLI01000052.1| 93804 93214 -3 - 591 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental
fig|6666666.67457.peg.2007 CDS gi|227861006|gb|ACLI01000052.1| 95495 93804 -2 - 1692 LpqB - none -
fig|6666666.67457.peg.2008 CDS gi|227861006|gb|ACLI01000052.1| 96961 95492 -1 - 1470 Putative two component system sensor kinase - none -
fig|6666666.67457.peg.2009 CDS gi|227861006|gb|ACLI01000052.1| 97772 97092 -2 - 681 DNA-binding response regulator mtrA - none -
fig|6666666.67457.peg.2010 CDS gi|227861006|gb|ACLI01000052.1| 98407 97796 -1 - 612 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.67457.peg.2011 CDS gi|227861006|gb|ACLI01000052.1| 99843 98407 -3 - 1437 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67457.peg.2012 CDS gi|227861006|gb|ACLI01000052.1| 100322 99969 -2 - 354 FIG00544092: hypothetical protein - none -
fig|6666666.67457.peg.2013 CDS gi|227861006|gb|ACLI01000052.1| 100522 101289 1 + 768 FIG00544185: hypothetical protein - none -
fig|6666666.67457.peg.2014 CDS gi|227861006|gb|ACLI01000052.1| 102567 101377 -3 - 1191 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67457.peg.2015 CDS gi|227861006|gb|ACLI01000052.1| 103557 102568 -3 - 990 FIG00545059: hypothetical protein - none -
fig|6666666.67457.peg.2016 CDS gi|227861006|gb|ACLI01000052.1| 105056 103680 -2 - 1377 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67457.peg.2017 CDS gi|227861006|gb|ACLI01000052.1| 105618 105253 -3 - 366 FIG00543823: hypothetical protein - none -
fig|6666666.67457.peg.2018 CDS gi|227861006|gb|ACLI01000052.1| 105784 106239 1 + 456 FIG00544777: hypothetical protein - none -
fig|6666666.67457.peg.2019 CDS gi|227861006|gb|ACLI01000052.1| 106784 106284 -2 - 501 hypothetical protein - none -
fig|6666666.67457.peg.2020 CDS gi|227861006|gb|ACLI01000052.1| 107348 107034 -2 - 315 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67457.peg.2021 CDS gi|227861006|gb|ACLI01000052.1| 108886 107768 -1 - 1119 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67457.peg.2022 CDS gi|227861006|gb|ACLI01000052.1| 109968 109078 -3 - 891 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67457.peg.2023 CDS gi|227861006|gb|ACLI01000052.1| 110210 111784 2 + 1575 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67457.peg.2024 CDS gi|227861006|gb|ACLI01000052.1| 111866 112519 2 + 654 FIG00545912: hypothetical protein - none -
fig|6666666.67457.peg.2025 CDS gi|227861006|gb|ACLI01000052.1| 112577 113581 2 + 1005 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.2026 CDS gi|227861006|gb|ACLI01000052.1| 113716 115020 1 + 1305 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.2027 CDS gi|227861006|gb|ACLI01000052.1| 115184 115669 2 + 486 FIG00544213: hypothetical protein - none -
fig|6666666.67457.peg.2028 CDS gi|227861006|gb|ACLI01000052.1| 115818 116864 3 + 1047 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.2029 CDS gi|227861006|gb|ACLI01000052.1| 116861 117697 2 + 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.2030 CDS gi|227861006|gb|ACLI01000052.1| 117708 117941 3 + 234 FIG00548589: hypothetical protein - none -
fig|6666666.67457.peg.2031 CDS gi|227861006|gb|ACLI01000052.1| 117948 118493 3 + 546 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67457.peg.2032 CDS gi|227861006|gb|ACLI01000052.1| 118936 118490 -1 - 447 FIG00546022: hypothetical protein - none -
fig|6666666.67457.peg.2033 CDS gi|227861006|gb|ACLI01000052.1| 119452 118952 -1 - 501 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2034 CDS gi|227861006|gb|ACLI01000052.1| 119896 119588 -1 - 309 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2035 CDS gi|227861007|gb|ACLI01000051.1| 1016 261 -2 - 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.67457.peg.2036 CDS gi|227861007|gb|ACLI01000051.1| 2128 1013 -1 - 1116 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.67457.peg.2037 CDS gi|227861007|gb|ACLI01000051.1| 3146 2121 -2 - 1026 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.67457.peg.2038 CDS gi|227861007|gb|ACLI01000051.1| 4688 3549 -2 - 1140 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.67457.peg.2039 CDS gi|227861007|gb|ACLI01000051.1| 5075 5686 2 + 612 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.2040 CDS gi|227861007|gb|ACLI01000051.1| 5840 6859 2 + 1020 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67457.peg.2041 CDS gi|227861007|gb|ACLI01000051.1| 7579 6950 -1 - 630 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67457.peg.2042 CDS gi|227861007|gb|ACLI01000051.1| 8043 7627 -3 - 417 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67457.peg.2043 CDS gi|227861007|gb|ACLI01000051.1| 8475 8056 -3 - 420 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67457.peg.2044 CDS gi|227861007|gb|ACLI01000051.1| 9605 8472 -2 - 1134 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67457.peg.2045 CDS gi|227861007|gb|ACLI01000051.1| 9688 10035 1 + 348 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.67457.peg.2046 CDS gi|227861007|gb|ACLI01000051.1| 10045 11064 1 + 1020 monooxygenase, putative - none -
fig|6666666.67457.peg.2047 CDS gi|227861007|gb|ACLI01000051.1| 11403 11173 -3 - 231 hypothetical protein - none -
fig|6666666.67457.peg.2048 CDS gi|227861007|gb|ACLI01000051.1| 11653 11507 -1 - 147 hypothetical protein - none -
fig|6666666.67457.peg.2049 CDS gi|227861007|gb|ACLI01000051.1| 11687 12868 2 + 1182 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67457.peg.2050 CDS gi|227861008|gb|ACLI01000050.1| 1431 625 -3 - 807 hypothetical protein - none -
fig|6666666.67457.peg.2051 CDS gi|227861009|gb|ACLI01000049.1| 128 1366 2 + 1239 hypothetical protein - none -
fig|6666666.67457.peg.2052 CDS gi|227861009|gb|ACLI01000049.1| 2394 1378 -3 - 1017 Putative membrane protein - none -
fig|6666666.67457.peg.2053 CDS gi|227861009|gb|ACLI01000049.1| 2725 2468 -1 - 258 hypothetical protein - none -
fig|6666666.67457.peg.2054 CDS gi|227861009|gb|ACLI01000049.1| 3753 2725 -3 - 1029 beta-lactamase class C - none -
fig|6666666.67457.peg.2055 CDS gi|227861009|gb|ACLI01000049.1| 4227 3760 -3 - 468 hypothetical protein - none -
fig|6666666.67457.peg.2056 CDS gi|227861009|gb|ACLI01000049.1| 4536 7211 3 + 2676 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67457.peg.2057 CDS gi|227861009|gb|ACLI01000049.1| 8011 7208 -1 - 804 SAM-dependent methyltransferases - none -
fig|6666666.67457.peg.2058 CDS gi|227861009|gb|ACLI01000049.1| 8244 9701 3 + 1458 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.67457.peg.2059 CDS gi|227861009|gb|ACLI01000049.1| 10344 12407 3 + 2064 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.67457.peg.2060 CDS gi|227861009|gb|ACLI01000049.1| 12456 13058 3 + 603 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67457.peg.2061 CDS gi|227861009|gb|ACLI01000049.1| 13163 13522 2 + 360 hypothetical protein - none -
fig|6666666.67457.peg.2062 CDS gi|227861009|gb|ACLI01000049.1| 14228 14103 -2 - 126 hypothetical protein - none -
fig|6666666.67457.peg.2063 CDS gi|227861009|gb|ACLI01000049.1| 14570 14448 -2 - 123 hypothetical protein - none -
fig|6666666.67457.peg.2064 CDS gi|227861010|gb|ACLI01000048.1| 516 1961 3 + 1446 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67457.peg.2065 CDS gi|227861010|gb|ACLI01000048.1| 2006 2596 2 + 591 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67457.peg.2066 CDS gi|227861010|gb|ACLI01000048.1| 3683 2670 -2 - 1014 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67457.peg.2067 CDS gi|227861010|gb|ACLI01000048.1| 3944 4963 2 + 1020 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.2068 CDS gi|227861010|gb|ACLI01000048.1| 5066 6073 2 + 1008 D-alanine--D-alanine ligase A (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67457.peg.2069 CDS gi|227861010|gb|ACLI01000048.1| 7520 6522 -2 - 999 putative alkanal monooxygenase alpha chain - none -
fig|6666666.67457.peg.2070 CDS gi|227861010|gb|ACLI01000048.1| 8539 7595 -1 - 945 Putative exported protein - none -
fig|6666666.67457.peg.2071 CDS gi|227861010|gb|ACLI01000048.1| 8708 9694 2 + 987 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67457.peg.2072 CDS gi|227861010|gb|ACLI01000048.1| 9704 10420 2 + 717 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67457.peg.2073 CDS gi|227861010|gb|ACLI01000048.1| 10432 12135 1 + 1704 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.2074 CDS gi|227861010|gb|ACLI01000048.1| 12140 14263 2 + 2124 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67457.peg.2075 CDS gi|227861010|gb|ACLI01000048.1| 14315 14527 2 + 213 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67457.peg.2076 CDS gi|227861010|gb|ACLI01000048.1| 14530 15138 1 + 609 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.67457.peg.2077 CDS gi|227861010|gb|ACLI01000048.1| 15135 15614 3 + 480 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.67457.peg.2078 CDS gi|227861010|gb|ACLI01000048.1| 15617 16360 2 + 744 FIG00543922: hypothetical protein - none -
fig|6666666.67457.peg.2079 CDS gi|227861010|gb|ACLI01000048.1| 16396 16551 1 + 156 hypothetical protein - none -
fig|6666666.67457.peg.2080 CDS gi|227861010|gb|ACLI01000048.1| 17321 16557 -2 - 765 ATP-binding protein - none -
fig|6666666.67457.peg.2081 CDS gi|227861010|gb|ACLI01000048.1| 18278 17322 -2 - 957 amino acid ABC transporter, permease protein (glnP) - none -
fig|6666666.67457.peg.2082 CDS gi|227861010|gb|ACLI01000048.1| 19242 18334 -3 - 909 Putative secreted protein - none -
fig|6666666.67457.peg.2083 CDS gi|227861010|gb|ACLI01000048.1| 19432 20256 1 + 825 hypothetical protein - none -
fig|6666666.67457.peg.2084 CDS gi|227861011|gb|ACLI01000047.1| 99 245 3 + 147 hypothetical protein - none -
fig|6666666.67457.peg.2085 CDS gi|227861011|gb|ACLI01000047.1| 1656 544 -3 - 1113 FIG005429: hypothetical protein - none -
fig|6666666.67457.peg.2086 CDS gi|227861011|gb|ACLI01000047.1| 5005 1643 -1 - 3363 FIG007317: hypothetical protein - none -
fig|6666666.67457.peg.2087 CDS gi|227861011|gb|ACLI01000047.1| 5622 5002 -3 - 621 FIG039767: hypothetical protein - none -
fig|6666666.67457.peg.2088 CDS gi|227861011|gb|ACLI01000047.1| 7137 5623 -3 - 1515 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.67457.peg.2089 CDS gi|227861011|gb|ACLI01000047.1| 8478 7177 -3 - 1302 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67457.peg.2090 CDS gi|227861011|gb|ACLI01000047.1| 8675 9148 2 + 474 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67457.peg.2091 CDS gi|227861011|gb|ACLI01000047.1| 9243 10232 3 + 990 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67457.peg.2092 CDS gi|227861011|gb|ACLI01000047.1| 10229 12895 2 + 2667 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.2093 CDS gi|227861011|gb|ACLI01000047.1| 14799 13501 -3 - 1299 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.67457.peg.2094 CDS gi|227861011|gb|ACLI01000047.1| 14978 16399 2 + 1422 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67457.peg.2095 CDS gi|227861011|gb|ACLI01000047.1| 16424 16987 2 + 564 FIG00547295: hypothetical protein - none -
fig|6666666.67457.peg.2096 CDS gi|227861011|gb|ACLI01000047.1| 17422 16994 -1 - 429 hypothetical protein - none -
fig|6666666.67457.peg.2097 CDS gi|227861011|gb|ACLI01000047.1| 17893 17459 -1 - 435 Transcriptional regulator, IclR family - none -
fig|6666666.67457.peg.2098 CDS gi|227861012|gb|ACLI01000046.1| 289 1041 1 + 753 Mobile element protein - none -
fig|6666666.67457.peg.2099 CDS gi|227861012|gb|ACLI01000046.1| 3195 1243 -3 - 1953 Thiamin biosynthesis protein ThiC Thiamin biosynthesis
fig|6666666.67457.peg.2100 CDS gi|227861012|gb|ACLI01000046.1| 5146 3806 -1 - 1341 Mobile element protein - none -
fig|6666666.67457.peg.2101 CDS gi|227861012|gb|ACLI01000046.1| 5740 5513 -1 - 228 putative transposase - none -
fig|6666666.67457.peg.2102 CDS gi|227861013|gb|ACLI01000045.1| 16 375 1 + 360 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67457.peg.2103 CDS gi|227861013|gb|ACLI01000045.1| 477 1598 3 + 1122 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67457.peg.2104 CDS gi|227861013|gb|ACLI01000045.1| 1750 2655 1 + 906 hypothetical protein - none -
fig|6666666.67457.peg.2105 CDS gi|227861013|gb|ACLI01000045.1| 3535 2663 -1 - 873 Spermidine synthase-like protein - none -
fig|6666666.67457.peg.2106 CDS gi|227861013|gb|ACLI01000045.1| 4715 3570 -2 - 1146 FIG00544505: hypothetical protein - none -
fig|6666666.67457.peg.2107 CDS gi|227861013|gb|ACLI01000045.1| 4911 6008 3 + 1098 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67457.peg.2108 CDS gi|227861013|gb|ACLI01000045.1| 6010 7017 1 + 1008 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67457.peg.2109 CDS gi|227861013|gb|ACLI01000045.1| 7102 8352 1 + 1251 hypothetical protein - none -
fig|6666666.67457.peg.2110 CDS gi|227861013|gb|ACLI01000045.1| 9848 8364 -2 - 1485 permease of the major facilitator superfamily - none -
fig|6666666.67457.peg.2111 CDS gi|227861013|gb|ACLI01000045.1| 10627 9932 -1 - 696 FIG00544413: hypothetical protein - none -
fig|6666666.67457.peg.2112 CDS gi|227861013|gb|ACLI01000045.1| 10706 12742 2 + 2037 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67457.peg.2113 CDS gi|227861013|gb|ACLI01000045.1| 12862 13491 1 + 630 putative nisin resistance protein - none -
fig|6666666.67457.peg.2114 CDS gi|227861013|gb|ACLI01000045.1| 13454 13900 2 + 447 putative nisin resistance protein - none -
fig|6666666.67457.peg.2115 CDS gi|227861013|gb|ACLI01000045.1| 14559 13897 -3 - 663 FIG00544014: hypothetical protein - none -
fig|6666666.67457.peg.2116 CDS gi|227861013|gb|ACLI01000045.1| 14793 15092 3 + 300 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67457.peg.2117 CDS gi|227861013|gb|ACLI01000045.1| 15098 16591 2 + 1494 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67457.peg.2118 CDS gi|227861013|gb|ACLI01000045.1| 16707 17546 3 + 840 siderophore-interacting protein - none -
fig|6666666.67457.peg.2119 CDS gi|227861013|gb|ACLI01000045.1| 17867 17547 -2 - 321 Conserved putative integral membrane protein - none -
fig|6666666.67457.peg.2120 CDS gi|227861013|gb|ACLI01000045.1| 18165 19094 3 + 930 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.2121 CDS gi|227861013|gb|ACLI01000045.1| 19291 20334 1 + 1044 transcriptional regulator - none -
fig|6666666.67457.peg.2122 CDS gi|227861013|gb|ACLI01000045.1| 20452 21090 1 + 639 N-acetylglutamate synthase related protein Arginine Biosynthesis -- gjo
fig|6666666.67457.peg.2123 CDS gi|227861013|gb|ACLI01000045.1| 21240 22745 3 + 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67457.peg.2124 CDS gi|227861013|gb|ACLI01000045.1| 22785 23879 3 + 1095 Putative aldo/keto-reductase family protein - none -
fig|6666666.67457.peg.2125 CDS gi|227861013|gb|ACLI01000045.1| 23982 24890 3 + 909 putative transport ATP-binding protein - none -
fig|6666666.67457.peg.2126 CDS gi|227861013|gb|ACLI01000045.1| 24887 25720 2 + 834 putative integral membrane protein - none -
fig|6666666.67457.peg.2127 CDS gi|227861013|gb|ACLI01000045.1| 25728 26900 3 + 1173 hypothetical protein - none -
fig|6666666.67457.peg.2128 CDS gi|227861013|gb|ACLI01000045.1| 26910 27575 3 + 666 DNA-binding response regulator, LuxR family - none -
fig|6666666.67457.peg.2129 CDS gi|227861013|gb|ACLI01000045.1| 28267 27572 -1 - 696 lysine exporter protein - none -
fig|6666666.67457.peg.2130 CDS gi|227861013|gb|ACLI01000045.1| 28329 29201 3 + 873 lysine export regulator protein - none -
fig|6666666.67457.peg.2131 CDS gi|227861013|gb|ACLI01000045.1| 30277 29198 -1 - 1080 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67457.peg.2132 CDS gi|227861013|gb|ACLI01000045.1| 30473 31135 2 + 663 putative secreted protein - none -
fig|6666666.67457.peg.2133 CDS gi|227861013|gb|ACLI01000045.1| 31198 32178 1 + 981 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67457.peg.2134 CDS gi|227861013|gb|ACLI01000045.1| 34128 32287 -3 - 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67457.peg.2135 CDS gi|227861013|gb|ACLI01000045.1| 35009 34323 -2 - 687 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67457.peg.2136 CDS gi|227861013|gb|ACLI01000045.1| 36838 35063 -1 - 1776 FIG00544780: hypothetical protein - none -
fig|6666666.67457.peg.2137 CDS gi|227861013|gb|ACLI01000045.1| 37510 37382 -1 - 129 hypothetical protein - none -
fig|6666666.67457.peg.2138 CDS gi|227861013|gb|ACLI01000045.1| 37478 39130 2 + 1653 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67457.peg.2139 CDS gi|227861013|gb|ACLI01000045.1| 39143 39661 2 + 519 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67457.peg.2140 CDS gi|227861013|gb|ACLI01000045.1| 39796 40809 1 + 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67457.peg.2141 CDS gi|227861013|gb|ACLI01000045.1| 41667 40951 -3 - 717 Nitrate ABC transporter, ATP-binding protein Nitrate and nitrite ammonification
fig|6666666.67457.peg.2142 CDS gi|227861013|gb|ACLI01000045.1| 42433 41660 -1 - 774 Nitrate ABC transporter, permease protein Nitrate and nitrite ammonification
fig|6666666.67457.peg.2143 CDS gi|227861013|gb|ACLI01000045.1| 43413 42430 -3 - 984 putative cyanate ABC transporter, substrate binding protein - none -
fig|6666666.67457.peg.2144 CDS gi|227861013|gb|ACLI01000045.1| 43935 44963 3 + 1029 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67457.peg.2145 CDS gi|227861013|gb|ACLI01000045.1| 44968 45468 1 + 501 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) Aromatic Amin Catabolism
fig|6666666.67457.peg.2146 CDS gi|227861013|gb|ACLI01000045.1| 45677 46066 2 + 390 hypothetical protein - none -
fig|6666666.67457.peg.2147 CDS gi|227861013|gb|ACLI01000045.1| 46283 47215 2 + 933 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67457.peg.2148 CDS gi|227861013|gb|ACLI01000045.1| 47231 49042 2 + 1812 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.67457.peg.2149 CDS gi|227861013|gb|ACLI01000045.1| 49117 50850 1 + 1734 FIG00544526: hypothetical protein - none -
fig|6666666.67457.peg.2150 CDS gi|227861013|gb|ACLI01000045.1| 51064 50900 -1 - 165 hypothetical protein - none -
fig|6666666.67457.peg.2151 CDS gi|227861013|gb|ACLI01000045.1| 51244 52836 1 + 1593 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.2152 CDS gi|227861013|gb|ACLI01000045.1| 53031 53663 3 + 633 hypothetical protein - none -
fig|6666666.67457.peg.2153 CDS gi|227861013|gb|ACLI01000045.1| 53715 54248 3 + 534 General stress protein - none -
fig|6666666.67457.peg.2154 CDS gi|227861013|gb|ACLI01000045.1| 54338 55276 2 + 939 FIG00548182: hypothetical protein - none -
fig|6666666.67457.peg.2155 CDS gi|227861013|gb|ACLI01000045.1| 55311 56333 3 + 1023 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67457.peg.2156 CDS gi|227861013|gb|ACLI01000045.1| 56384 58240 2 + 1857 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67457.peg.2157 CDS gi|227861013|gb|ACLI01000045.1| 58240 58923 1 + 684 DEDDh 3@1-5@1 exonuclease domain of the epsilon subunit of DNA polymerase III DNA replication strays
fig|6666666.67457.peg.2158 CDS gi|227861013|gb|ACLI01000045.1| 59042 59815 2 + 774 Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67457.peg.2159 CDS gi|227861013|gb|ACLI01000045.1| 59816 60454 2 + 639 FIG00547055: hypothetical protein - none -
fig|6666666.67457.peg.2160 CDS gi|227861013|gb|ACLI01000045.1| 61592 60462 -2 - 1131 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67457.peg.2161 CDS gi|227861013|gb|ACLI01000045.1| 61668 63149 3 + 1482 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67457.peg.2162 CDS gi|227861013|gb|ACLI01000045.1| 63359 63156 -2 - 204 Transcriptional regulator, Cro/CI family - none -
fig|6666666.67457.peg.2163 CDS gi|227861013|gb|ACLI01000045.1| 63832 63359 -1 - 474 FIG00546547: hypothetical protein - none -
fig|6666666.67457.peg.2164 CDS gi|227861013|gb|ACLI01000045.1| 64095 64310 3 + 216 hypothetical protein - none -
fig|6666666.67457.peg.2165 CDS gi|227861013|gb|ACLI01000045.1| 64464 64751 3 + 288 hypothetical protein - none -
fig|6666666.67457.peg.2166 CDS gi|227861013|gb|ACLI01000045.1| 64741 65070 1 + 330 hypothetical protein - none -
fig|6666666.67457.peg.2167 CDS gi|227861013|gb|ACLI01000045.1| 65067 66047 3 + 981 hypothetical protein - none -
fig|6666666.67457.peg.2168 CDS gi|227861013|gb|ACLI01000045.1| 66044 66394 2 + 351 hypothetical protein - none -
fig|6666666.67457.peg.2169 CDS gi|227861013|gb|ACLI01000045.1| 66463 68013 1 + 1551 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Respiratory Complex I
fig|6666666.67457.peg.2170 CDS gi|227861013|gb|ACLI01000045.1| 68007 69557 3 + 1551 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Respiratory Complex I
fig|6666666.67457.peg.2171 CDS gi|227861013|gb|ACLI01000045.1| 69557 71368 2 + 1812 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Respiratory Complex I
fig|6666666.67457.peg.2172 CDS gi|227861013|gb|ACLI01000045.1| 71368 71952 1 + 585 hypothetical protein - none -
fig|6666666.67457.peg.2173 CDS gi|227861013|gb|ACLI01000045.1| 72076 71924 -1 - 153 hypothetical protein - none -
fig|6666666.67457.peg.2174 CDS gi|227861013|gb|ACLI01000045.1| 72709 72185 -1 - 525 hypothetical protein - none -
fig|6666666.67457.peg.2175 CDS gi|227861014|gb|ACLI01000044.1| 96 674 3 + 579 SAM-dependent methyltransferase - none -
fig|6666666.67457.peg.2176 CDS gi|227861014|gb|ACLI01000044.1| 846 1628 3 + 783 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67457.peg.2177 CDS gi|227861015|gb|ACLI01000043.1| 226 510 1 + 285 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67457.peg.2178 CDS gi|227861015|gb|ACLI01000043.1| 2780 585 -2 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67457.peg.2179 CDS gi|227861015|gb|ACLI01000043.1| 4898 2871 -2 - 2028 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.67457.peg.2180 CDS gi|227861015|gb|ACLI01000043.1| 5034 5897 3 + 864 ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.2181 CDS gi|227861015|gb|ACLI01000043.1| 5963 6772 2 + 810 FIG00996530: hypothetical protein - none -
fig|6666666.67457.peg.2182 CDS gi|227861016|gb|ACLI01000042.1| 779 33 -2 - 747 FIG00544995: hypothetical protein - none -
fig|6666666.67457.peg.2183 CDS gi|227861016|gb|ACLI01000042.1| 1726 947 -1 - 780 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67457.peg.2184 CDS gi|227861016|gb|ACLI01000042.1| 2434 1742 -1 - 693 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67457.peg.2185 CDS gi|227861016|gb|ACLI01000042.1| 4043 2442 -2 - 1602 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67457.peg.2186 CDS gi|227861016|gb|ACLI01000042.1| 7792 4043 -1 - 3750 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67457.peg.2187 CDS gi|227861016|gb|ACLI01000042.1| 9148 7811 -1 - 1338 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67457.peg.2188 CDS gi|227861016|gb|ACLI01000042.1| 9400 9891 1 + 492 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67457.peg.2189 CDS gi|227861016|gb|ACLI01000042.1| 10481 9885 -2 - 597 FIG00546849: hypothetical protein - none -
fig|6666666.67457.peg.2190 CDS gi|227861016|gb|ACLI01000042.1| 11722 10478 -1 - 1245 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67457.peg.2191 CDS gi|227861016|gb|ACLI01000042.1| 12644 11715 -2 - 930 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67457.peg.2192 CDS gi|227861016|gb|ACLI01000042.1| 14667 12952 -3 - 1716 acyl-CoA synthetase - none -
fig|6666666.67457.peg.2193 CDS gi|227861016|gb|ACLI01000042.1| 14803 14678 -1 - 126 hypothetical protein - none -
fig|6666666.67457.peg.2194 CDS gi|227861016|gb|ACLI01000042.1| 15251 17413 2 + 2163 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67457.peg.2195 CDS gi|227861016|gb|ACLI01000042.1| 17413 18489 1 + 1077 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67457.peg.2196 CDS gi|227861016|gb|ACLI01000042.1| 18492 19334 3 + 843 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67457.peg.2197 CDS gi|227861016|gb|ACLI01000042.1| 19384 20034 1 + 651 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.67457.peg.2198 CDS gi|227861016|gb|ACLI01000042.1| 20037 21203 3 + 1167 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67457.peg.2199 CDS gi|227861016|gb|ACLI01000042.1| 21276 21743 3 + 468 ATP synthase protein I - none -
fig|6666666.67457.peg.2200 CDS gi|227861016|gb|ACLI01000042.1| 22457 23197 2 + 741 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2201 CDS gi|227861016|gb|ACLI01000042.1| 23329 23574 1 + 246 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2202 CDS gi|227861016|gb|ACLI01000042.1| 23604 24176 3 + 573 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2203 CDS gi|227861016|gb|ACLI01000042.1| 24182 24997 2 + 816 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2204 CDS gi|227861016|gb|ACLI01000042.1| 25024 26697 1 + 1674 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2205 CDS gi|227861016|gb|ACLI01000042.1| 26759 27739 2 + 981 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2206 CDS gi|227861016|gb|ACLI01000042.1| 27743 29188 2 + 1446 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2207 CDS gi|227861016|gb|ACLI01000042.1| 29200 29574 1 + 375 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67457.peg.2208 CDS gi|227861016|gb|ACLI01000042.1| 29810 30286 2 + 477 FIG00544079: hypothetical protein - none -
fig|6666666.67457.peg.2209 CDS gi|227861016|gb|ACLI01000042.1| 30309 31001 3 + 693 FIG00996186: hypothetical protein - none -
fig|6666666.67457.peg.2210 CDS gi|227861016|gb|ACLI01000042.1| 31013 31297 2 + 285 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.67457.peg.2211 CDS gi|227861016|gb|ACLI01000042.1| 31766 31302 -2 - 465 Methylmalonyl-CoA epimerase (EC 5.1.99.1); Ethylmalonyl-CoA epimerase - none -
fig|6666666.67457.peg.2212 CDS gi|227861016|gb|ACLI01000042.1| 31837 32145 1 + 309 FIG00544011: hypothetical protein - none -
fig|6666666.67457.peg.2213 CDS gi|227861016|gb|ACLI01000042.1| 32378 32139 -2 - 240 hypothetical protein - none -
fig|6666666.67457.peg.2214 CDS gi|227861017|gb|ACLI01000041.1| 2320 1298 -1 - 1023 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67457.peg.2215 CDS gi|227861017|gb|ACLI01000041.1| 3842 2325 -2 - 1518 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67457.peg.2216 CDS gi|227861017|gb|ACLI01000041.1| 4050 4973 3 + 924 hypothetical protein - none -
fig|6666666.67457.peg.2217 CDS gi|227861017|gb|ACLI01000041.1| 6598 5654 -1 - 945 Formiminoglutamase (EC 3.5.3.8) - none -
fig|6666666.67457.peg.2218 CDS gi|227861017|gb|ACLI01000041.1| 8067 6670 -3 - 1398 putative amino acid permease - none -
fig|6666666.67457.peg.2219 CDS gi|227861017|gb|ACLI01000041.1| 8434 10644 1 + 2211 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67457.peg.2220 CDS gi|227861017|gb|ACLI01000041.1| 11384 10911 -2 - 474 FIG00544250: hypothetical protein - none -
fig|6666666.67457.peg.2221 CDS gi|227861017|gb|ACLI01000041.1| 11990 11439 -2 - 552 FIG00544279: hypothetical protein - none -
fig|6666666.67457.peg.2222 CDS gi|227861017|gb|ACLI01000041.1| 13656 12049 -3 - 1608 Sodium/proline symporter - none -
fig|6666666.67457.peg.2223 CDS gi|227861017|gb|ACLI01000041.1| 13989 17093 3 + 3105 Helicase, SNF2/RAD54 family - none -
fig|6666666.67457.peg.2224 CDS gi|227861017|gb|ACLI01000041.1| 17086 17958 1 + 873 FIG00545674: hypothetical protein - none -
fig|6666666.67457.peg.2225 CDS gi|227861017|gb|ACLI01000041.1| 17995 19170 1 + 1176 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67457.peg.2226 CDS gi|227861017|gb|ACLI01000041.1| 19173 21809 3 + 2637 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67457.peg.2227 CDS gi|227861017|gb|ACLI01000041.1| 21848 23011 2 + 1164 hypothetical protein - none -
fig|6666666.67457.peg.2228 CDS gi|227861017|gb|ACLI01000041.1| 23141 23857 2 + 717 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.67457.peg.2229 CDS gi|227861017|gb|ACLI01000041.1| 23861 24514 2 + 654 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67457.peg.2230 CDS gi|227861017|gb|ACLI01000041.1| 24511 25596 1 + 1086 Acetyl-CoA acetyltransferase - none -
fig|6666666.67457.peg.2231 CDS gi|227861017|gb|ACLI01000041.1| 25601 25816 2 + 216 hypothetical protein - none -
fig|6666666.67457.peg.2232 CDS gi|227861017|gb|ACLI01000041.1| 26443 25904 -1 - 540 FIG00545197: hypothetical protein - none -
fig|6666666.67457.peg.2233 CDS gi|227861017|gb|ACLI01000041.1| 26734 27222 1 + 489 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.2234 CDS gi|227861017|gb|ACLI01000041.1| 27329 27592 2 + 264 FIG00546860: hypothetical protein - none -
fig|6666666.67457.peg.2235 CDS gi|227861017|gb|ACLI01000041.1| 28119 27679 -3 - 441 hypothetical protein - none -
fig|6666666.67457.peg.2236 CDS gi|227861017|gb|ACLI01000041.1| 30231 28663 -3 - 1569 FIG00546777: hypothetical protein - none -
fig|6666666.67457.peg.2237 CDS gi|227861017|gb|ACLI01000041.1| 30411 32063 3 + 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67457.peg.2238 CDS gi|227861017|gb|ACLI01000041.1| 32064 33443 3 + 1380 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.2239 CDS gi|227861017|gb|ACLI01000041.1| 34179 33508 -3 - 672 hypothetical protein - none -
fig|6666666.67457.peg.2240 CDS gi|227861017|gb|ACLI01000041.1| 34709 34182 -2 - 528 hypothetical protein - none -
fig|6666666.67457.peg.2241 CDS gi|227861017|gb|ACLI01000041.1| 34921 35583 1 + 663 putative transcription regulator - none -
fig|6666666.67457.peg.2242 CDS gi|227861017|gb|ACLI01000041.1| 35587 37845 1 + 2259 hypothetical protein - none -
fig|6666666.67457.peg.2243 CDS gi|227861017|gb|ACLI01000041.1| 38954 37851 -2 - 1104 hypothetical protein - none -
fig|6666666.67457.peg.2244 CDS gi|227861017|gb|ACLI01000041.1| 39487 39149 -1 - 339 hypothetical protein - none -
fig|6666666.67457.peg.2245 CDS gi|227861017|gb|ACLI01000041.1| 40146 40559 3 + 414 hypothetical protein - none -
fig|6666666.67457.peg.2246 CDS gi|227861017|gb|ACLI01000041.1| 40635 40817 3 + 183 hypothetical protein - none -
fig|6666666.67457.peg.2247 CDS gi|227861017|gb|ACLI01000041.1| 41578 40814 -1 - 765 hypothetical protein - none -
fig|6666666.67457.peg.2248 CDS gi|227861017|gb|ACLI01000041.1| 42622 41834 -1 - 789 hypothetical protein - none -
fig|6666666.67457.peg.2249 CDS gi|227861017|gb|ACLI01000041.1| 42902 44239 2 + 1338 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67457.peg.2250 CDS gi|227861017|gb|ACLI01000041.1| 44249 45178 2 + 930 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67457.peg.2251 CDS gi|227861018|gb|ACLI01000040.1| 50 520 2 + 471 Mobile element protein - none -
fig|6666666.67457.peg.2252 CDS gi|227861018|gb|ACLI01000040.1| 556 984 1 + 429 Mobile element protein - none -
fig|6666666.67457.peg.2253 CDS gi|227861018|gb|ACLI01000040.1| 1060 2457 1 + 1398 Mobile element protein - none -
fig|6666666.67457.peg.2254 CDS gi|227861018|gb|ACLI01000040.1| 2520 3188 3 + 669 Mobile element protein - none -
fig|6666666.67457.peg.2255 CDS gi|227861018|gb|ACLI01000040.1| 3743 3609 -2 - 135 hypothetical protein - none -
fig|6666666.67457.peg.2256 CDS gi|227861018|gb|ACLI01000040.1| 4189 3791 -1 - 399 transposase - none -
fig|6666666.67457.peg.2257 CDS gi|227861018|gb|ACLI01000040.1| 4649 4356 -2 - 294 hypothetical protein - none -
fig|6666666.67457.peg.2258 CDS gi|227861018|gb|ACLI01000040.1| 5696 4680 -2 - 1017 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67457.peg.2259 CDS gi|227861021|gb|ACLI01000037.1| 694 383 -1 - 312 Mobile element protein - none -
fig|6666666.67457.peg.2260 CDS gi|227861022|gb|ACLI01000036.1| 227 424 2 + 198 FIG00547853: hypothetical protein - none -
fig|6666666.67457.peg.2261 CDS gi|227861022|gb|ACLI01000036.1| 459 1031 3 + 573 FIG00547853: hypothetical protein - none -
fig|6666666.67457.peg.2262 CDS gi|227861022|gb|ACLI01000036.1| 1085 1420 2 + 336 hypothetical protein - none -
fig|6666666.67457.peg.2263 CDS gi|227861022|gb|ACLI01000036.1| 1794 1567 -3 - 228 putative transposase - none -
fig|6666666.67457.peg.2264 CDS gi|227861023|gb|ACLI01000035.1| 516 629 3 + 114 hypothetical protein - none -
fig|6666666.67457.peg.2265 CDS gi|227861023|gb|ACLI01000035.1| 802 626 -1 - 177 hypothetical protein - none -
fig|6666666.67457.peg.2266 CDS gi|227861023|gb|ACLI01000035.1| 1271 1441 2 + 171 hypothetical protein - none -
fig|6666666.67457.peg.2267 CDS gi|227861023|gb|ACLI01000035.1| 1663 2016 1 + 354 hypothetical protein - none -
fig|6666666.67457.peg.2268 CDS gi|227861023|gb|ACLI01000035.1| 2793 2182 -3 - 612 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.2269 CDS gi|227861023|gb|ACLI01000035.1| 3606 2845 -3 - 762 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.67457.peg.2270 CDS gi|227861023|gb|ACLI01000035.1| 3980 3657 -2 - 324 ArsR-family transcriptional regulatory protein - none -
fig|6666666.67457.peg.2271 CDS gi|227861023|gb|ACLI01000035.1| 4919 4134 -2 - 786 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67457.peg.2272 CDS gi|227861023|gb|ACLI01000035.1| 7354 5345 -1 - 2010 Copper resistance protein D Copper homeostasis
fig|6666666.67457.peg.2273 CDS gi|227861023|gb|ACLI01000035.1| 7653 8243 3 + 591 FIG00546434: hypothetical protein - none -
fig|6666666.67457.peg.2274 CDS gi|227861023|gb|ACLI01000035.1| 8417 8782 2 + 366 Transcriptional regulator, ArsR family - none -
fig|6666666.67457.peg.2275 CDS gi|227861023|gb|ACLI01000035.1| 8815 10752 1 + 1938 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67457.peg.2276 CDS gi|227861023|gb|ACLI01000035.1| 10823 11857 2 + 1035 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67457.peg.2277 CDS gi|227861023|gb|ACLI01000035.1| 12152 14068 2 + 1917 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67457.peg.2278 CDS gi|227861023|gb|ACLI01000035.1| 14139 14849 3 + 711 Mobile element protein - none -
fig|6666666.67457.peg.2279 CDS gi|227861023|gb|ACLI01000035.1| 16144 15017 -1 - 1128 RESOLVASE FAMILY RECOMBINASE - none -
fig|6666666.67457.peg.2280 CDS gi|227861023|gb|ACLI01000035.1| 16310 16531 2 + 222 hypothetical protein - none -
fig|6666666.67457.peg.2281 CDS gi|227861023|gb|ACLI01000035.1| 16828 16538 -1 - 291 Mobile element protein - none -
fig|6666666.67457.peg.2282 CDS gi|227861023|gb|ACLI01000035.1| 20635 19466 -1 - 1170 hypothetical protein - none -
fig|6666666.67457.peg.2283 CDS gi|227861023|gb|ACLI01000035.1| 20960 21106 2 + 147 hypothetical protein - none -
fig|6666666.67457.peg.2284 CDS gi|227861023|gb|ACLI01000035.1| 21756 21532 -3 - 225 hypothetical protein - none -
fig|6666666.67457.peg.2285 CDS gi|227861024|gb|ACLI01000034.1| 1529 921 -2 - 609 ABC transport system ATP-binding protein - none -
fig|6666666.67457.peg.2286 CDS gi|227861024|gb|ACLI01000034.1| 3751 2474 -1 - 1278 hypothetical protein - none -
fig|6666666.67457.peg.2287 CDS gi|227861024|gb|ACLI01000034.1| 3819 4259 3 + 441 Mobile element protein - none -
fig|6666666.67457.peg.2288 CDS gi|227861024|gb|ACLI01000034.1| 4301 4711 2 + 411 Mobile element protein - none -
fig|6666666.67457.peg.2289 CDS gi|227861024|gb|ACLI01000034.1| 5959 7602 1 + 1644 hypothetical protein - none -
fig|6666666.67457.peg.2290 CDS gi|227861024|gb|ACLI01000034.1| 8290 8787 1 + 498 Mrr restriction system protein - none -
fig|6666666.67457.peg.2291 CDS gi|227861024|gb|ACLI01000034.1| 9023 8856 -2 - 168 hypothetical protein - none -
fig|6666666.67457.peg.2292 CDS gi|227861024|gb|ACLI01000034.1| 9261 12821 3 + 3561 hypothetical protein - none -
fig|6666666.67457.peg.2293 CDS gi|227861024|gb|ACLI01000034.1| 13004 13117 2 + 114 hypothetical protein - none -
fig|6666666.67457.peg.2294 CDS gi|227861024|gb|ACLI01000034.1| 13973 16042 2 + 2070 hypothetical protein - none -
fig|6666666.67457.peg.2295 CDS gi|227861024|gb|ACLI01000034.1| 16896 16036 -3 - 861 Mobile element protein - none -
fig|6666666.67457.peg.2296 CDS gi|227861024|gb|ACLI01000034.1| 18054 17863 -3 - 192 FIG00546571: hypothetical protein - none -
fig|6666666.67457.peg.2297 CDS gi|227861025|gb|ACLI01000033.1| 1548 1393 -3 - 156 hypothetical protein - none -
fig|6666666.67457.peg.2298 CDS gi|227861026|gb|ACLI01000032.1| 1201 32 -1 - 1170 Transposase - none -
fig|6666666.67457.peg.2299 CDS gi|227861026|gb|ACLI01000032.1| 1806 2534 3 + 729 Mobile element protein - none -
fig|6666666.67457.peg.2300 CDS gi|227861027|gb|ACLI01000031.1| 10 201 1 + 192 FIG00546840: hypothetical protein - none -
fig|6666666.67457.peg.2301 CDS gi|227861027|gb|ACLI01000031.1| 206 1642 2 + 1437 Multicopper oxidase Copper homeostasis
fig|6666666.67457.peg.2302 CDS gi|227861027|gb|ACLI01000031.1| 2121 1657 -3 - 465 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.67457.peg.2303 CDS gi|227861027|gb|ACLI01000031.1| 2158 3078 1 + 921 putative secreted protein - none -
fig|6666666.67457.peg.2304 CDS gi|227861027|gb|ACLI01000031.1| 5259 3490 -3 - 1770 hypothetical protein - none -
fig|6666666.67457.peg.2305 CDS gi|227861027|gb|ACLI01000031.1| 6750 5311 -3 - 1440 hypothetical protein - none -
fig|6666666.67457.peg.2306 CDS gi|227861027|gb|ACLI01000031.1| 11938 12249 1 + 312 Mobile element protein - none -
fig|6666666.67457.peg.2307 CDS gi|227861027|gb|ACLI01000031.1| 12525 13154 3 + 630 Mobile element protein - none -
fig|6666666.67457.peg.2308 CDS gi|227861027|gb|ACLI01000031.1| 13982 13278 -2 - 705 Putative predicted metal-dependent hydrolase Restriction-Modification System
fig|6666666.67457.peg.2309 CDS gi|227861027|gb|ACLI01000031.1| 17278 13979 -1 - 3300 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.2310 CDS gi|227861027|gb|ACLI01000031.1| 18498 17275 -3 - 1224 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.2311 CDS gi|227861027|gb|ACLI01000031.1| 20824 18491 -1 - 2334 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67457.peg.2312 CDS gi|227861027|gb|ACLI01000031.1| 21336 22205 3 + 870 transposase - none -
fig|6666666.67457.peg.2313 CDS gi|227861027|gb|ACLI01000031.1| 22518 22685 3 + 168 transposase - none -
fig|6666666.67457.peg.2314 CDS gi|227861027|gb|ACLI01000031.1| 25605 24298 -3 - 1308 hypothetical protein - none -
fig|6666666.67457.peg.2315 CDS gi|227861028|gb|ACLI01000030.1| 244 834 1 + 591 FIG00544230: hypothetical protein - none -
fig|6666666.67457.peg.2316 CDS gi|227861028|gb|ACLI01000030.1| 1132 2118 1 + 987 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.67457.peg.2317 CDS gi|227861028|gb|ACLI01000030.1| 3336 2140 -3 - 1197 putative serine protease - none -
fig|6666666.67457.peg.2318 CDS gi|227861028|gb|ACLI01000030.1| 4258 3494 -1 - 765 FIG01193531: hypothetical protein - none -
fig|6666666.67457.peg.2319 CDS gi|227861028|gb|ACLI01000030.1| 4809 4258 -3 - 552 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.67457.peg.2320 CDS gi|227861028|gb|ACLI01000030.1| 5636 4842 -2 - 795 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67457.peg.2321 CDS gi|227861028|gb|ACLI01000030.1| 5719 5910 1 + 192 hypothetical protein - none -
fig|6666666.67457.peg.2322 CDS gi|227861028|gb|ACLI01000030.1| 6169 6852 1 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67457.peg.2323 CDS gi|227861028|gb|ACLI01000030.1| 7743 6937 -3 - 807 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67457.peg.2324 CDS gi|227861028|gb|ACLI01000030.1| 8399 7938 -2 - 462 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67457.peg.2325 CDS gi|227861028|gb|ACLI01000030.1| 8559 8404 -3 - 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67457.peg.2326 CDS gi|227861028|gb|ACLI01000030.1| 9001 8651 -1 - 351 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67457.peg.2327 CDS gi|227861028|gb|ACLI01000030.1| 9938 9300 -2 - 639 FIG00548649: hypothetical protein - none -
fig|6666666.67457.peg.2328 CDS gi|227861028|gb|ACLI01000030.1| 12296 9969 -2 - 2328 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67457.peg.2329 CDS gi|227861028|gb|ACLI01000030.1| 13596 12421 -3 - 1176 putative sensor kinase - none -
fig|6666666.67457.peg.2330 CDS gi|227861028|gb|ACLI01000030.1| 14336 13614 -2 - 723 sensory transduction protein - none -
fig|6666666.67457.peg.2331 CDS gi|227861028|gb|ACLI01000030.1| 14610 14377 -3 - 234 hypothetical protein - none -
fig|6666666.67457.peg.2332 CDS gi|227861028|gb|ACLI01000030.1| 14754 15362 3 + 609 putative exported protein - none -
fig|6666666.67457.peg.2333 CDS gi|227861028|gb|ACLI01000030.1| 15478 17886 1 + 2409 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67457.peg.2334 CDS gi|227861028|gb|ACLI01000030.1| 18153 17893 -3 - 261 FIG00545205: hypothetical protein - none -
fig|6666666.67457.peg.2335 CDS gi|227861029|gb|ACLI01000029.1| 105 1265 3 + 1161 hypothetical protein - none -
fig|6666666.67457.peg.2336 CDS gi|227861029|gb|ACLI01000029.1| 2286 1249 -3 - 1038 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.67457.peg.2337 CDS gi|227861029|gb|ACLI01000029.1| 2312 2479 2 + 168 hypothetical protein - none -
fig|6666666.67457.peg.2338 CDS gi|227861029|gb|ACLI01000029.1| 2885 3748 2 + 864 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67457.peg.2339 CDS gi|227861030|gb|ACLI01000028.1| 24 1634 3 + 1611 Putative oxidase - none -
fig|6666666.67457.peg.2340 CDS gi|227861030|gb|ACLI01000028.1| 1700 2731 2 + 1032 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.2341 CDS gi|227861030|gb|ACLI01000028.1| 4852 2798 -1 - 2055 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67457.peg.2342 CDS gi|227861030|gb|ACLI01000028.1| 6108 5050 -3 - 1059 FIG00545756: hypothetical protein - none -
fig|6666666.67457.peg.2343 CDS gi|227861030|gb|ACLI01000028.1| 6218 7021 2 + 804 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67457.peg.2344 CDS gi|227861030|gb|ACLI01000028.1| 7018 7386 1 + 369 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67457.peg.2345 CDS gi|227861030|gb|ACLI01000028.1| 8881 7946 -1 - 936 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67457.peg.2346 CDS gi|227861030|gb|ACLI01000028.1| 10150 8927 -1 - 1224 FIG00547211: hypothetical protein - none -
fig|6666666.67457.peg.2347 CDS gi|227861030|gb|ACLI01000028.1| 10877 10242 -2 - 636 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.67457.peg.2348 CDS gi|227861030|gb|ACLI01000028.1| 11986 10880 -1 - 1107 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.67457.peg.2349 CDS gi|227861030|gb|ACLI01000028.1| 13888 12065 -1 - 1824 FIG00546273: hypothetical protein - none -
fig|6666666.67457.peg.2350 CDS gi|227861030|gb|ACLI01000028.1| 14866 13958 -1 - 909 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67457.peg.2351 CDS gi|227861030|gb|ACLI01000028.1| 15790 14924 -1 - 867 hypothetical protein - none -
fig|6666666.67457.peg.2352 CDS gi|227861030|gb|ACLI01000028.1| 17603 16137 -2 - 1467 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) / Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67457.peg.2353 CDS gi|227861030|gb|ACLI01000028.1| 18818 17625 -2 - 1194 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.67457.peg.2354 CDS gi|227861030|gb|ACLI01000028.1| 20050 18830 -1 - 1221 Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) - none -
fig|6666666.67457.peg.2355 CDS gi|227861030|gb|ACLI01000028.1| 20969 20091 -2 - 879 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.2356 CDS gi|227861030|gb|ACLI01000028.1| 21784 20996 -1 - 789 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.2357 CDS gi|227861030|gb|ACLI01000028.1| 23720 21801 -2 - 1920 TRAP transporter, 4TM/12TM fusion protein, unknown substrate 2 TRAP Transporter unknown substrate 2
fig|6666666.67457.peg.2358 CDS gi|227861030|gb|ACLI01000028.1| 24890 23847 -2 - 1044 TRAP transporter solute receptor, TAXI family precursor, unknown substrate 2 TRAP Transporter unknown substrate 2
fig|6666666.67457.peg.2359 CDS gi|227861030|gb|ACLI01000028.1| 25427 26872 2 + 1446 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67457.peg.2360 CDS gi|227861030|gb|ACLI01000028.1| 26921 27529 2 + 609 hypothetical protein - none -
fig|6666666.67457.peg.2361 CDS gi|227861030|gb|ACLI01000028.1| 27585 28439 3 + 855 hypothetical protein - none -
fig|6666666.67457.peg.2362 CDS gi|227861030|gb|ACLI01000028.1| 29428 28451 -1 - 978 Peptidase M48, Ste24p precursor - none -
fig|6666666.67457.peg.2363 CDS gi|227861030|gb|ACLI01000028.1| 29787 29425 -3 - 363 Transcriptional regulator, MecI family - none -
fig|6666666.67457.peg.2364 CDS gi|227861030|gb|ACLI01000028.1| 30275 29796 -2 - 480 hypothetical protein - none -
fig|6666666.67457.peg.2365 CDS gi|227861030|gb|ACLI01000028.1| 30465 31226 3 + 762 hypothetical protein - none -
fig|6666666.67457.peg.2366 CDS gi|227861030|gb|ACLI01000028.1| 31232 32113 2 + 882 putative cytochrome c biogenesis protein - none -
fig|6666666.67457.peg.2367 CDS gi|227861030|gb|ACLI01000028.1| 33583 32339 -1 - 1245 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67457.peg.2368 CDS gi|227861030|gb|ACLI01000028.1| 33648 35174 3 + 1527 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67457.peg.2369 CDS gi|227861030|gb|ACLI01000028.1| 35395 36108 1 + 714 hypothetical protein - none -
fig|6666666.67457.peg.2370 CDS gi|227861030|gb|ACLI01000028.1| 36887 36168 -2 - 720 FIG00544520: hypothetical protein - none -
fig|6666666.67457.peg.2371 CDS gi|227861030|gb|ACLI01000028.1| 39890 36891 -2 - 3000 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67457.peg.2372 CDS gi|227861030|gb|ACLI01000028.1| 39909 40313 3 + 405 hypothetical protein - none -
fig|6666666.67457.peg.2373 CDS gi|227861030|gb|ACLI01000028.1| 40549 40346 -1 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67457.peg.2374 CDS gi|227861030|gb|ACLI01000028.1| 40778 43264 2 + 2487 FIG00545284: hypothetical protein - none -
fig|6666666.67457.peg.2375 CDS gi|227861030|gb|ACLI01000028.1| 43347 43799 3 + 453 hypothetical protein - none -
fig|6666666.67457.peg.2376 CDS gi|227861030|gb|ACLI01000028.1| 43796 44119 2 + 324 hypothetical protein - none -
fig|6666666.67457.peg.2377 CDS gi|227861030|gb|ACLI01000028.1| 44469 44131 -3 - 339 FIG00545374: hypothetical protein - none -
fig|6666666.67457.peg.2378 CDS gi|227861030|gb|ACLI01000028.1| 44743 44441 -1 - 303 FIG00544831: hypothetical protein - none -
fig|6666666.67457.peg.2379 CDS gi|227861030|gb|ACLI01000028.1| 44980 44756 -1 - 225 FIG043778: hypothetical protein - none -
fig|6666666.67457.peg.2380 CDS gi|227861030|gb|ACLI01000028.1| 45693 45076 -3 - 618 FIG054221: Possible conserved alanine rich membrane protein - none -
fig|6666666.67457.peg.2381 CDS gi|227861030|gb|ACLI01000028.1| 46355 45690 -2 - 666 FIG016317: Probable conserved transmembrane protein - none -
fig|6666666.67457.peg.2382 CDS gi|227861031|gb|ACLI01000027.1| 269 1273 2 + 1005 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67457.peg.2383 CDS gi|227861031|gb|ACLI01000027.1| 1277 2656 2 + 1380 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.67457.peg.2384 CDS gi|227861031|gb|ACLI01000027.1| 2658 3524 3 + 867 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67457.peg.2385 CDS gi|227861032|gb|ACLI01000026.1| 794 549 -2 - 246 Mobile element protein - none -
fig|6666666.67457.peg.2386 CDS gi|227861032|gb|ACLI01000026.1| 2180 957 -2 - 1224 putative Capsular polysaccharide biosynthesis glycosyl transferase - none -
fig|6666666.67457.peg.2387 CDS gi|227861032|gb|ACLI01000026.1| 6167 4356 -2 - 1812 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.67457.peg.2388 CDS gi|227861032|gb|ACLI01000026.1| 9160 7763 -1 - 1398 Tyrosine-protein kinase Wzc (EC 2.7.10.2) - none -
fig|6666666.67457.peg.2389 CDS gi|227861032|gb|ACLI01000026.1| 9727 10833 1 + 1107 FIG00545251: hypothetical protein - none -
fig|6666666.67457.peg.2390 CDS gi|227861032|gb|ACLI01000026.1| 11227 10919 -1 - 309 hypothetical protein - none -
fig|6666666.67457.peg.2391 CDS gi|227861032|gb|ACLI01000026.1| 11259 13280 3 + 2022 serine protease - none -
fig|6666666.67457.peg.2392 CDS gi|227861032|gb|ACLI01000026.1| 13308 14693 3 + 1386 aminopeptidase N - none -
fig|6666666.67457.peg.2393 CDS gi|227861032|gb|ACLI01000026.1| 14690 15958 2 + 1269 FIG00548230: hypothetical protein - none -
fig|6666666.67457.peg.2394 CDS gi|227861032|gb|ACLI01000026.1| 16746 16546 -3 - 201 hypothetical protein - none -
fig|6666666.67457.peg.2395 CDS gi|227861032|gb|ACLI01000026.1| 18627 17683 -3 - 945 hypothetical protein - none -
fig|6666666.67457.peg.2396 CDS gi|227861032|gb|ACLI01000026.1| 19235 18795 -2 - 441 FIG00846810: hypothetical protein - none -
fig|6666666.67457.peg.2397 CDS gi|227861033|gb|ACLI01000025.1| 702 1931 3 + 1230 hypothetical protein - none -
fig|6666666.67457.peg.2398 CDS gi|227861033|gb|ACLI01000025.1| 2382 2029 -3 - 354 Mobile element protein - none -
fig|6666666.67457.peg.2399 CDS gi|227861034|gb|ACLI01000024.1| 97 240 1 + 144 hypothetical membrane protein - none -
fig|6666666.67457.peg.2400 CDS gi|227861035|gb|ACLI01000023.1| 134 1018 2 + 885 Mobile element protein - none -
fig|6666666.67457.peg.2401 CDS gi|227861036|gb|ACLI01000022.1| 228 518 3 + 291 Mobile element protein - none -
fig|6666666.67457.peg.2402 CDS gi|227861037|gb|ACLI01000021.1| 1276 3996 1 + 2721 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67457.peg.2403 CDS gi|227861037|gb|ACLI01000021.1| 5036 4155 -2 - 882 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67457.peg.2404 CDS gi|227861037|gb|ACLI01000021.1| 5176 5727 1 + 552 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.67457.peg.2405 CDS gi|227861037|gb|ACLI01000021.1| 5797 6507 1 + 711 FIG00544149: hypothetical protein - none -
fig|6666666.67457.peg.2406 CDS gi|227861037|gb|ACLI01000021.1| 7574 6504 -2 - 1071 DNA integrity scanning protein DisA A DNA integrity scanning protein that co-occurs with RadA
fig|6666666.67457.peg.2407 CDS gi|227861037|gb|ACLI01000021.1| 8972 7578 -2 - 1395 DNA repair protein RadA A DNA integrity scanning protein that co-occurs with RadA;
DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67457.peg.2408 CDS gi|227861037|gb|ACLI01000021.1| 9647 9063 -2 - 585 FIG00544037: hypothetical protein - none -
fig|6666666.67457.peg.2409 CDS gi|227861037|gb|ACLI01000021.1| 9816 12086 3 + 2271 hypothetical protein - none -
fig|6666666.67457.peg.2410 CDS gi|227861037|gb|ACLI01000021.1| 12221 12817 2 + 597 CarD-like transcriptional regulator - none -
fig|6666666.67457.peg.2411 CDS gi|227861037|gb|ACLI01000021.1| 12879 13571 3 + 693 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67457.peg.2412 CDS gi|227861037|gb|ACLI01000021.1| 13564 14046 1 + 483 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67457.peg.2413 CDS gi|227861037|gb|ACLI01000021.1| 14140 14862 1 + 723 Transcriptional regulator, GntR family - none -
fig|6666666.67457.peg.2414 CDS gi|227861037|gb|ACLI01000021.1| 14986 15747 1 + 762 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.67457.peg.2415 CDS gi|227861037|gb|ACLI01000021.1| 17066 15744 -2 - 1323 hypothetical protein - none -
fig|6666666.67457.peg.2416 CDS gi|227861037|gb|ACLI01000021.1| 17269 18573 1 + 1305 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67457.peg.2417 CDS gi|227861037|gb|ACLI01000021.1| 18608 19549 2 + 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67457.peg.2418 CDS gi|227861037|gb|ACLI01000021.1| 20426 19554 -2 - 873 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67457.peg.2419 CDS gi|227861037|gb|ACLI01000021.1| 21116 20427 -2 - 690 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67457.peg.2420 CDS gi|227861037|gb|ACLI01000021.1| 21996 21127 -3 - 870 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67457.peg.2421 CDS gi|227861037|gb|ACLI01000021.1| 22073 23152 2 + 1080 Transcriptional regulator, LacI family - none -
fig|6666666.67457.peg.2422 CDS gi|227861037|gb|ACLI01000021.1| 23925 23149 -3 - 777 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67457.peg.2423 CDS gi|227861037|gb|ACLI01000021.1| 24416 23946 -2 - 471 FIG00544334: hypothetical protein - none -
fig|6666666.67457.peg.2424 CDS gi|227861037|gb|ACLI01000021.1| 25861 24413 -1 - 1449 Trehalose-6-phosphate synthase (EC 2.4.1.15) - none -
fig|6666666.67457.peg.2425 CDS gi|227861037|gb|ACLI01000021.1| 26219 25890 -2 - 330 Putative uncharacterized protein - none -
fig|6666666.67457.peg.2426 CDS gi|227861037|gb|ACLI01000021.1| 27740 26280 -2 - 1461 Putative amino acid export carrier protein - none -
fig|6666666.67457.peg.2427 CDS gi|227861037|gb|ACLI01000021.1| 28007 28354 2 + 348 hypothetical protein - none -
fig|6666666.67457.peg.2428 CDS gi|227861037|gb|ACLI01000021.1| 29008 28415 -1 - 594 Putative integral membrane protein - none -
fig|6666666.67457.peg.2429 CDS gi|227861037|gb|ACLI01000021.1| 29331 29005 -3 - 327 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67457.peg.2430 CDS gi|227861037|gb|ACLI01000021.1| 30691 29414 -1 - 1278 Benzoate transport protein Benzoate degradation
fig|6666666.67457.peg.2431 CDS gi|227861037|gb|ACLI01000021.1| 31105 31950 1 + 846 hypothetical protein - none -
fig|6666666.67457.peg.2432 CDS gi|227861037|gb|ACLI01000021.1| 32801 31947 -2 - 855 FIG00545315: hypothetical protein - none -
fig|6666666.67457.peg.2433 CDS gi|227861037|gb|ACLI01000021.1| 32823 33785 3 + 963 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.2434 CDS gi|227861037|gb|ACLI01000021.1| 35047 33782 -1 - 1266 hypothetical protein - none -
fig|6666666.67457.peg.2435 CDS gi|227861037|gb|ACLI01000021.1| 36454 35147 -1 - 1308 Permease - none -
fig|6666666.67457.peg.2436 CDS gi|227861037|gb|ACLI01000021.1| 37963 36524 -1 - 1440 FIG00544776: hypothetical protein - none -
fig|6666666.67457.peg.2437 CDS gi|227861037|gb|ACLI01000021.1| 38120 38830 2 + 711 two-component system, response regulator - none -
fig|6666666.67457.peg.2438 CDS gi|227861037|gb|ACLI01000021.1| 38845 40260 1 + 1416 putative sensor kinase - none -
fig|6666666.67457.peg.2439 CDS gi|227861037|gb|ACLI01000021.1| 40704 40276 -3 - 429 HIT family protein - none -
fig|6666666.67457.peg.2440 CDS gi|227861037|gb|ACLI01000021.1| 40733 41335 2 + 603 hypothetical protein - none -
fig|6666666.67457.peg.2441 CDS gi|227861037|gb|ACLI01000021.1| 41371 42651 1 + 1281 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2442 CDS gi|227861037|gb|ACLI01000021.1| 42664 43836 1 + 1173 Valine--pyruvate aminotransferase (EC 2.6.1.66) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67457.peg.2443 CDS gi|227861037|gb|ACLI01000021.1| 43874 45304 2 + 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67457.peg.2444 CDS gi|227861037|gb|ACLI01000021.1| 45556 45705 1 + 150 hypothetical protein - none -
fig|6666666.67457.peg.2445 CDS gi|227861037|gb|ACLI01000021.1| 45817 46710 1 + 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2446 CDS gi|227861037|gb|ACLI01000021.1| 46731 48842 3 + 2112 Protease II (EC 3.4.21.83) - none -
fig|6666666.67457.peg.2447 CDS gi|227861037|gb|ACLI01000021.1| 48889 49566 1 + 678 FIG00546625: hypothetical protein - none -
fig|6666666.67457.peg.2448 CDS gi|227861037|gb|ACLI01000021.1| 52119 49567 -3 - 2553 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67457.peg.2449 CDS gi|227861037|gb|ACLI01000021.1| 52274 52762 2 + 489 Glutathione peroxidase family protein - none -
fig|6666666.67457.peg.2450 CDS gi|227861037|gb|ACLI01000021.1| 52840 53085 1 + 246 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2451 CDS gi|227861037|gb|ACLI01000021.1| 53082 53753 3 + 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2452 CDS gi|227861037|gb|ACLI01000021.1| 53771 56062 2 + 2292 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2453 CDS gi|227861037|gb|ACLI01000021.1| 56229 56969 3 + 741 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67457.peg.2454 CDS gi|227861037|gb|ACLI01000021.1| 57973 56966 -1 - 1008 acyl-CoA hydrolase - none -
fig|6666666.67457.peg.2455 CDS gi|227861037|gb|ACLI01000021.1| 58010 58387 2 + 378 FIG00544811: hypothetical protein - none -
fig|6666666.67457.peg.2456 CDS gi|227861037|gb|ACLI01000021.1| 58435 59967 1 + 1533 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2457 CDS gi|227861037|gb|ACLI01000021.1| 60045 61133 3 + 1089 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2458 CDS gi|227861037|gb|ACLI01000021.1| 61593 61450 -3 - 144 FIG00544089: hypothetical protein - none -
fig|6666666.67457.peg.2459 CDS gi|227861037|gb|ACLI01000021.1| 63009 61897 -3 - 1113 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67457.peg.2460 CDS gi|227861037|gb|ACLI01000021.1| 63137 64063 2 + 927 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67457.peg.2461 CDS gi|227861037|gb|ACLI01000021.1| 64763 64065 -2 - 699 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67457.peg.2462 CDS gi|227861037|gb|ACLI01000021.1| 64803 65897 3 + 1095 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.67457.peg.2463 CDS gi|227861037|gb|ACLI01000021.1| 66667 65894 -1 - 774 FIG00544976: hypothetical protein - none -
fig|6666666.67457.peg.2464 CDS gi|227861037|gb|ACLI01000021.1| 66728 67600 2 + 873 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67457.peg.2465 CDS gi|227861037|gb|ACLI01000021.1| 67915 69036 1 + 1122 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67457.peg.2466 CDS gi|227861037|gb|ACLI01000021.1| 69188 70255 2 + 1068 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67457.peg.2467 CDS gi|227861037|gb|ACLI01000021.1| 70272 71204 3 + 933 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67457.peg.2468 CDS gi|227861037|gb|ACLI01000021.1| 71249 72022 2 + 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67457.peg.2469 CDS gi|227861037|gb|ACLI01000021.1| 72111 73214 3 + 1104 cytochrome P450-like putative monoxygenase,C-terminal fragment - none -
fig|6666666.67457.peg.2470 CDS gi|227861037|gb|ACLI01000021.1| 73951 73211 -1 - 741 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67457.peg.2471 CDS gi|227861037|gb|ACLI01000021.1| 75172 74027 -1 - 1146 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67457.peg.2472 CDS gi|227861037|gb|ACLI01000021.1| 75227 75376 2 + 150 hypothetical protein - none -
fig|6666666.67457.peg.2473 CDS gi|227861037|gb|ACLI01000021.1| 75526 77049 1 + 1524 putative coenzyme A transferase - none -
fig|6666666.67457.peg.2474 CDS gi|227861037|gb|ACLI01000021.1| 77219 78508 2 + 1290 putative fatty acid alpha hydroxylase - none -
fig|6666666.67457.peg.2475 CDS gi|227861037|gb|ACLI01000021.1| 79431 84122 3 + 4692 hypothetical protein - none -
fig|6666666.67457.peg.2476 CDS gi|227861037|gb|ACLI01000021.1| 84519 85685 3 + 1167 Fimbrial subunit type 2 precursor - none -
fig|6666666.67457.peg.2477 CDS gi|227861037|gb|ACLI01000021.1| 85767 86735 3 + 969 Sortase A, LPXTG specific Sortase
fig|6666666.67457.peg.2478 CDS gi|227861037|gb|ACLI01000021.1| 86738 88501 2 + 1764 hypothetical protein - none -
fig|6666666.67457.peg.2479 CDS gi|227861037|gb|ACLI01000021.1| 88498 89445 1 + 948 Sortase A, LPXTG specific Sortase
fig|6666666.67457.peg.2480 CDS gi|227861037|gb|ACLI01000021.1| 89468 90328 2 + 861 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67457.peg.2481 CDS gi|227861037|gb|ACLI01000021.1| 90392 91111 2 + 720 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - none -
fig|6666666.67457.peg.2482 CDS gi|227861037|gb|ACLI01000021.1| 91648 92847 1 + 1200 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67457.peg.2483 CDS gi|227861037|gb|ACLI01000021.1| 92857 93741 1 + 885 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67457.peg.2484 CDS gi|227861037|gb|ACLI01000021.1| 94154 94447 2 + 294 predicted acetyltransferase - none -
fig|6666666.67457.peg.2485 CDS gi|227861037|gb|ACLI01000021.1| 95058 94510 -3 - 549 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67457.peg.2486 CDS gi|227861037|gb|ACLI01000021.1| 96161 95226 -2 - 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67457.peg.2487 CDS gi|227861037|gb|ACLI01000021.1| 96822 97667 3 + 846 Putative transcriptional regulator - none -
fig|6666666.67457.peg.2488 CDS gi|227861037|gb|ACLI01000021.1| 98264 97692 -2 - 573 Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67457.peg.2489 CDS gi|227861037|gb|ACLI01000021.1| 98384 99592 2 + 1209 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67457.peg.2490 CDS gi|227861038|gb|ACLI01000020.1| 15 209 3 + 195 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67457.peg.2491 CDS gi|227861038|gb|ACLI01000020.1| 260 1831 2 + 1572 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67457.peg.2492 CDS gi|227861038|gb|ACLI01000020.1| 2062 3039 1 + 978 FIG00547066: hypothetical protein - none -
fig|6666666.67457.peg.2493 CDS gi|227861038|gb|ACLI01000020.1| 3169 4596 1 + 1428 putative transport protein - none -
fig|6666666.67457.peg.2494 CDS gi|227861038|gb|ACLI01000020.1| 5033 4593 -2 - 441 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67457.peg.2495 CDS gi|227861039|gb|ACLI01000019.1| 156 761 3 + 606 Possible membrane protein - none -
fig|6666666.67457.peg.2496 CDS gi|227861039|gb|ACLI01000019.1| 764 1246 2 + 483 FIG00547633: hypothetical protein - none -
fig|6666666.67457.peg.2497 CDS gi|227861039|gb|ACLI01000019.1| 1243 1644 1 + 402 FIG00544957: hypothetical protein - none -
fig|6666666.67457.peg.2498 CDS gi|227861039|gb|ACLI01000019.1| 1653 2087 3 + 435 Putative ESX-1 secretion system component Rv3877 - none -
fig|6666666.67457.peg.2499 CDS gi|227861039|gb|ACLI01000019.1| 2075 3634 2 + 1560 Spermidine synthase (EC 2.5.1.16) Polyamine Metabolism
fig|6666666.67457.peg.2500 CDS gi|227861039|gb|ACLI01000019.1| 4275 3799 -3 - 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67457.peg.2501 CDS gi|227861039|gb|ACLI01000019.1| 4400 5665 2 + 1266 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67457.peg.2502 CDS gi|227861039|gb|ACLI01000019.1| 5666 6607 2 + 942 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67457.peg.2503 CDS gi|227861039|gb|ACLI01000019.1| 6640 7242 1 + 603 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67457.peg.2504 CDS gi|227861039|gb|ACLI01000019.1| 7353 8339 3 + 987 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67457.peg.2505 CDS gi|227861039|gb|ACLI01000019.1| 8346 9785 3 + 1440 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67457.peg.2506 CDS gi|227861039|gb|ACLI01000019.1| 9778 10371 1 + 594 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.2507 CDS gi|227861039|gb|ACLI01000019.1| 10414 11226 1 + 813 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67457.peg.2508 CDS gi|227861039|gb|ACLI01000019.1| 11219 11605 2 + 387 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67457.peg.2509 CDS gi|227861039|gb|ACLI01000019.1| 11606 12094 2 + 489 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67457.peg.2510 CDS gi|227861039|gb|ACLI01000019.1| 12119 12565 2 + 447 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67457.peg.2511 CDS gi|227861039|gb|ACLI01000019.1| 12567 13328 3 + 762 FIG00544686: hypothetical protein - none -
fig|6666666.67457.peg.2512 CDS gi|227861039|gb|ACLI01000019.1| 13328 14029 2 + 702 FIG173306: hypothetical protein - none -
fig|6666666.67457.peg.2513 CDS gi|227861040|gb|ACLI01000018.1| 121 864 1 + 744 FIG00544840: hypothetical protein - none -
fig|6666666.67457.peg.2514 CDS gi|227861040|gb|ACLI01000018.1| 945 1499 3 + 555 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67457.peg.2515 CDS gi|227861040|gb|ACLI01000018.1| 1486 2172 1 + 687 probable RNA methyltransferase - none -
fig|6666666.67457.peg.2516 CDS gi|227861040|gb|ACLI01000018.1| 2274 3491 3 + 1218 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67457.peg.2517 CDS gi|227861040|gb|ACLI01000018.1| 3784 4818 1 + 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67457.peg.2518 CDS gi|227861040|gb|ACLI01000018.1| 4899 6125 3 + 1227 FIG00545517: hypothetical protein - none -
fig|6666666.67457.peg.2519 CDS gi|227861040|gb|ACLI01000018.1| 6292 6122 -1 - 171 Sec-independent protein secretion pathway component - none -
fig|6666666.67457.peg.2520 CDS gi|227861040|gb|ACLI01000018.1| 7187 6336 -2 - 852 FIG00545467: hypothetical protein - none -
fig|6666666.67457.peg.2521 CDS gi|227861040|gb|ACLI01000018.1| 7309 8598 1 + 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67457.peg.2522 CDS gi|227861040|gb|ACLI01000018.1| 9498 8908 -3 - 591 hypothetical protein - none -
fig|6666666.67457.peg.2523 CDS gi|227861040|gb|ACLI01000018.1| 10741 9557 -1 - 1185 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.2524 CDS gi|227861040|gb|ACLI01000018.1| 10724 10888 2 + 165 hypothetical protein - none -
fig|6666666.67457.peg.2525 CDS gi|227861040|gb|ACLI01000018.1| 10888 12042 1 + 1155 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67457.peg.2526 CDS gi|227861040|gb|ACLI01000018.1| 12600 12064 -3 - 537 FIG00544625: hypothetical protein - none -
fig|6666666.67457.peg.2527 CDS gi|227861040|gb|ACLI01000018.1| 14181 12814 -3 - 1368 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2528 CDS gi|227861040|gb|ACLI01000018.1| 14691 16073 3 + 1383 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67457.peg.2529 CDS gi|227861040|gb|ACLI01000018.1| 16077 17273 3 + 1197 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67457.peg.2530 CDS gi|227861040|gb|ACLI01000018.1| 19886 17355 -2 - 2532 serine/threonine protein kinase - none -
fig|6666666.67457.peg.2531 CDS gi|227861040|gb|ACLI01000018.1| 20940 19873 -3 - 1068 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67457.peg.2532 CDS gi|227861040|gb|ACLI01000018.1| 22382 20940 -2 - 1443 FIG00543876: hypothetical protein - none -
fig|6666666.67457.peg.2533 CDS gi|227861040|gb|ACLI01000018.1| 22889 23287 2 + 399 mutT3 - none -
fig|6666666.67457.peg.2534 CDS gi|227861040|gb|ACLI01000018.1| 23312 24250 2 + 939 putative ABC transporter ATP-binding protein - none -
fig|6666666.67457.peg.2535 CDS gi|227861040|gb|ACLI01000018.1| 24255 25016 3 + 762 Putative ABC transport system membrane protein - none -
fig|6666666.67457.peg.2536 CDS gi|227861040|gb|ACLI01000018.1| 26355 25036 -3 - 1320 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.67457.peg.2537 CDS gi|227861040|gb|ACLI01000018.1| 26600 27799 2 + 1200 permeases of the major facilitator superfamily - none -
fig|6666666.67457.peg.2538 CDS gi|227861040|gb|ACLI01000018.1| 29309 27807 -2 - 1503 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.2539 CDS gi|227861040|gb|ACLI01000018.1| 30116 29331 -2 - 786 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67457.peg.2540 CDS gi|227861040|gb|ACLI01000018.1| 31182 30175 -3 - 1008 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67457.peg.2541 CDS gi|227861040|gb|ACLI01000018.1| 31753 31172 -1 - 582 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Translation termination factors bacterial
fig|6666666.67457.peg.2542 CDS gi|227861040|gb|ACLI01000018.1| 31752 31982 3 + 231 FIG00544061: hypothetical protein - none -
fig|6666666.67457.peg.2543 CDS gi|227861040|gb|ACLI01000018.1| 31988 32716 2 + 729 FIG00544658: hypothetical protein - none -
fig|6666666.67457.peg.2544 CDS gi|227861040|gb|ACLI01000018.1| 32774 33910 2 + 1137 Putative cytoplasmic protein - none -
fig|6666666.67457.peg.2545 CDS gi|227861040|gb|ACLI01000018.1| 33907 34500 1 + 594 FIG00545234: hypothetical protein - none -
fig|6666666.67457.peg.2546 CDS gi|227861040|gb|ACLI01000018.1| 34888 34505 -1 - 384 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67457.peg.2547 CDS gi|227861040|gb|ACLI01000018.1| 35165 34890 -2 - 276 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67457.peg.2548 CDS gi|227861040|gb|ACLI01000018.1| 35679 35170 -3 - 510 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67457.peg.2549 CDS gi|227861040|gb|ACLI01000018.1| 37442 35676 -2 - 1767 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67457.peg.2550 CDS gi|227861040|gb|ACLI01000018.1| 37938 37447 -3 - 492 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67457.peg.2551 CDS gi|227861040|gb|ACLI01000018.1| 40995 37939 -3 - 3057 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67457.peg.2552 CDS gi|227861040|gb|ACLI01000018.1| 41935 41375 -1 - 561 Acetyl-CoA acetyltransferase - none -
fig|6666666.67457.peg.2553 CDS gi|227861040|gb|ACLI01000018.1| 43679 42264 -2 - 1416 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67457.peg.2554 CDS gi|227861040|gb|ACLI01000018.1| 43941 44225 3 + 285 hypothetical protein - none -
fig|6666666.67457.peg.2555 CDS gi|227861040|gb|ACLI01000018.1| 44251 44862 1 + 612 putative type IV peptidase - none -
fig|6666666.67457.peg.2556 CDS gi|227861040|gb|ACLI01000018.1| 45109 46752 1 + 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67457.peg.2557 CDS gi|227861040|gb|ACLI01000018.1| 47226 47399 3 + 174 hypothetical protein - none -
fig|6666666.67457.peg.2558 CDS gi|227861040|gb|ACLI01000018.1| 47477 47614 2 + 138 FIG00547658: hypothetical protein - none -
fig|6666666.67457.peg.2559 CDS gi|227861040|gb|ACLI01000018.1| 47745 48644 3 + 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67457.peg.2560 CDS gi|227861040|gb|ACLI01000018.1| 52562 48681 -2 - 3882 putative non-ribosomal peptide synthetase - none -
fig|6666666.67457.peg.2561 CDS gi|227861040|gb|ACLI01000018.1| 53017 52571 -1 - 447 Transcriptional regulator, MarR family - none -
fig|6666666.67457.peg.2562 CDS gi|227861040|gb|ACLI01000018.1| 53448 53155 -3 - 294 rhodanese-related sulfurtransferase - none -
fig|6666666.67457.peg.2563 CDS gi|227861041|gb|ACLI01000017.1| 81 416 3 + 336 hypothetical protein - none -
fig|6666666.67457.peg.2564 CDS gi|227861041|gb|ACLI01000017.1| 595 837 1 + 243 hypothetical protein - none -
fig|6666666.67457.peg.2565 CDS gi|227861041|gb|ACLI01000017.1| 2237 831 -2 - 1407 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog - none -
fig|6666666.67457.peg.2566 CDS gi|227861041|gb|ACLI01000017.1| 2319 3038 3 + 720 FIG00545075: hypothetical protein - none -
fig|6666666.67457.peg.2567 CDS gi|227861041|gb|ACLI01000017.1| 3108 3932 3 + 825 Rhodanese-related sulfurtransferase - none -
fig|6666666.67457.peg.2568 CDS gi|227861042|gb|ACLI01000016.1| 731 3289 2 + 2559 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67457.peg.2569 CDS gi|227861042|gb|ACLI01000016.1| 4022 3306 -2 - 717 hypothetical protein - none -
fig|6666666.67457.peg.2570 CDS gi|227861042|gb|ACLI01000016.1| 4111 4533 1 + 423 FIG00544891: hypothetical protein - none -
fig|6666666.67457.peg.2571 CDS gi|227861042|gb|ACLI01000016.1| 5033 4515 -2 - 519 hypothetical protein - none -
fig|6666666.67457.peg.2572 CDS gi|227861043|gb|ACLI01000015.1| 1974 883 -3 - 1092 putative secreted protein - none -
fig|6666666.67457.peg.2573 CDS gi|227861043|gb|ACLI01000015.1| 2204 2869 2 + 666 hypothetical protein - none -
fig|6666666.67457.peg.2574 CDS gi|227861043|gb|ACLI01000015.1| 4074 2866 -3 - 1209 FIG00547887: hypothetical protein - none -
fig|6666666.67457.peg.2575 CDS gi|227861043|gb|ACLI01000015.1| 4134 4862 3 + 729 ABC-type transporter, ATPase component - none -
fig|6666666.67457.peg.2576 CDS gi|227861043|gb|ACLI01000015.1| 4859 5578 2 + 720 putative ABC transporter - none -
fig|6666666.67457.peg.2577 CDS gi|227861043|gb|ACLI01000015.1| 5648 6475 2 + 828 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.67457.peg.2578 CDS gi|227861043|gb|ACLI01000015.1| 7017 8012 3 + 996 hypothetical protein - none -
fig|6666666.67457.peg.2579 CDS gi|227861043|gb|ACLI01000015.1| 9570 8197 -3 - 1374 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2580 CDS gi|227861043|gb|ACLI01000015.1| 9625 9831 1 + 207 hypothetical protein - none -
fig|6666666.67457.peg.2581 CDS gi|227861043|gb|ACLI01000015.1| 9987 11681 3 + 1695 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2582 CDS gi|227861043|gb|ACLI01000015.1| 11678 11941 2 + 264 Ferredoxin-like protein involved in electron transfer Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2583 CDS gi|227861043|gb|ACLI01000015.1| 11938 12723 1 + 786 Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2584 CDS gi|227861043|gb|ACLI01000015.1| 12720 13646 3 + 927 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2585 CDS gi|227861043|gb|ACLI01000015.1| 13646 14983 2 + 1338 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2586 CDS gi|227861043|gb|ACLI01000015.1| 15008 15745 2 + 738 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.67457.peg.2587 CDS gi|227861043|gb|ACLI01000015.1| 15782 16753 2 + 972 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67457.peg.2588 CDS gi|227861043|gb|ACLI01000015.1| 16772 17746 2 + 975 hypothetical protein - none -
fig|6666666.67457.peg.2589 CDS gi|227861043|gb|ACLI01000015.1| 17756 18325 2 + 570 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.67457.peg.2590 CDS gi|227861043|gb|ACLI01000015.1| 19722 18337 -3 - 1386 FIG00544912: hypothetical protein - none -
fig|6666666.67457.peg.2591 CDS gi|227861043|gb|ACLI01000015.1| 19908 20312 3 + 405 Signal peptidase I - none -
fig|6666666.67457.peg.2592 CDS gi|227861043|gb|ACLI01000015.1| 20657 21124 2 + 468 hypothetical protein - none -
fig|6666666.67457.peg.2593 CDS gi|227861043|gb|ACLI01000015.1| 21180 21776 3 + 597 hypothetical protein - none -
fig|6666666.67457.peg.2594 CDS gi|227861043|gb|ACLI01000015.1| 21912 23168 3 + 1257 hypothetical protein - none -
fig|6666666.67457.peg.2595 CDS gi|227861043|gb|ACLI01000015.1| 23155 23787 1 + 633 hypothetical protein - none -
fig|6666666.67457.peg.2596 CDS gi|227861043|gb|ACLI01000015.1| 24057 25916 3 + 1860 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67457.peg.2597 CDS gi|227861043|gb|ACLI01000015.1| 25916 26629 2 + 714 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67457.peg.2598 CDS gi|227861043|gb|ACLI01000015.1| 26867 28054 2 + 1188 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67457.peg.2599 CDS gi|227861043|gb|ACLI01000015.1| 28224 28571 3 + 348 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67457.peg.2600 CDS gi|227861043|gb|ACLI01000015.1| 28991 30511 2 + 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67457.peg.2601 CDS gi|227861043|gb|ACLI01000015.1| 31741 30596 -1 - 1146 FIG00544569: hypothetical protein - none -
fig|6666666.67457.peg.2602 CDS gi|227861043|gb|ACLI01000015.1| 31989 31738 -3 - 252 FIG00547073: hypothetical protein - none -
fig|6666666.67457.peg.2603 CDS gi|227861043|gb|ACLI01000015.1| 32045 32872 2 + 828 FIG00545709: hypothetical protein - none -
fig|6666666.67457.peg.2604 CDS gi|227861043|gb|ACLI01000015.1| 34135 32873 -1 - 1263 hypothetical protein - none -
fig|6666666.67457.peg.2605 CDS gi|227861043|gb|ACLI01000015.1| 35011 34190 -1 - 822 alkanal monooxygenase - none -
fig|6666666.67457.peg.2606 CDS gi|227861043|gb|ACLI01000015.1| 36088 35234 -1 - 855 Mobile element protein - none -
fig|6666666.67457.peg.2607 CDS gi|227861043|gb|ACLI01000015.1| 36420 36109 -3 - 312 Mobile element protein - none -
fig|6666666.67457.peg.2608 CDS gi|227861043|gb|ACLI01000015.1| 36924 37451 3 + 528 hypothetical protein - none -
fig|6666666.67457.peg.2609 CDS gi|227861043|gb|ACLI01000015.1| 37653 37507 -3 - 147 hypothetical protein - none -
fig|6666666.67457.peg.2610 CDS gi|227861044|gb|ACLI01000014.1| 1416 628 -3 - 789 FIG00547859: hypothetical protein - none -
fig|6666666.67457.peg.2611 CDS gi|227861044|gb|ACLI01000014.1| 1479 2582 3 + 1104 Lysophospholipid acyltransferase - none -
fig|6666666.67457.peg.2612 CDS gi|227861044|gb|ACLI01000014.1| 2674 3165 1 + 492 hypothetical protein - none -
fig|6666666.67457.peg.2613 CDS gi|227861044|gb|ACLI01000014.1| 3483 3166 -3 - 318 putative mercury resistance operon regulator MerR - none -
fig|6666666.67457.peg.2614 CDS gi|227861044|gb|ACLI01000014.1| 3559 4650 1 + 1092 putative ABC transporter permease protein - none -
fig|6666666.67457.peg.2615 CDS gi|227861044|gb|ACLI01000014.1| 4672 5664 1 + 993 hypothetical protein - none -
fig|6666666.67457.peg.2616 CDS gi|227861044|gb|ACLI01000014.1| 5661 6437 3 + 777 Probable ATP-binding component of ABC transporter - none -
fig|6666666.67457.peg.2617 CDS gi|227861044|gb|ACLI01000014.1| 6935 6441 -2 - 495 Acetyltransferase, GNAT family - none -
fig|6666666.67457.peg.2618 CDS gi|227861044|gb|ACLI01000014.1| 10037 7026 -2 - 3012 Conserved putative integral membrane protein - none -
fig|6666666.67457.peg.2619 CDS gi|227861044|gb|ACLI01000014.1| 10318 10061 -1 - 258 hypothetical protein - none -
fig|6666666.67457.peg.2620 CDS gi|227861044|gb|ACLI01000014.1| 10807 10340 -1 - 468 FIG00545938: hypothetical protein - none -
fig|6666666.67457.peg.2621 CDS gi|227861044|gb|ACLI01000014.1| 10935 12125 3 + 1191 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.67457.peg.2622 CDS gi|227861044|gb|ACLI01000014.1| 13023 12139 -3 - 885 hypothetical protein - none -
fig|6666666.67457.peg.2623 CDS gi|227861044|gb|ACLI01000014.1| 13372 15072 1 + 1701 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67457.peg.2624 CDS gi|227861044|gb|ACLI01000014.1| 16033 15080 -1 - 954 predicted Co/Zn/Cd cation transporter - none -
fig|6666666.67457.peg.2625 CDS gi|227861044|gb|ACLI01000014.1| 16518 16066 -3 - 453 hypothetical protein - none -
fig|6666666.67457.peg.2626 CDS gi|227861044|gb|ACLI01000014.1| 18465 16657 -3 - 1809 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.67457.peg.2627 CDS gi|227861044|gb|ACLI01000014.1| 18816 19397 3 + 582 Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming) pyrimidine conversions
fig|6666666.67457.peg.2628 CDS gi|227861044|gb|ACLI01000014.1| 19476 20795 3 + 1320 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67457.peg.2629 CDS gi|227861044|gb|ACLI01000014.1| 22168 20855 -1 - 1314 Alanine transaminase (EC 2.6.1.2) - none -
fig|6666666.67457.peg.2630 CDS gi|227861044|gb|ACLI01000014.1| 22907 22260 -2 - 648 conserved hypothetical protein, putative F420-dependent NADP reductase - none -
fig|6666666.67457.peg.2631 CDS gi|227861044|gb|ACLI01000014.1| 23608 23015 -1 - 594 FIG00548305: hypothetical protein - none -
fig|6666666.67457.peg.2632 CDS gi|227861044|gb|ACLI01000014.1| 23991 25151 3 + 1161 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.67457.peg.2633 CDS gi|227861044|gb|ACLI01000014.1| 25978 25388 -1 - 591 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67457.peg.2634 CDS gi|227861044|gb|ACLI01000014.1| 26169 25975 -3 - 195 FIG00545448: hypothetical protein - none -
fig|6666666.67457.peg.2635 CDS gi|227861044|gb|ACLI01000014.1| 27169 26174 -1 - 996 Membrane protease family protein BA0301 - none -
fig|6666666.67457.peg.2636 CDS gi|227861044|gb|ACLI01000014.1| 27998 27276 -2 - 723 putative nodulin 21-related protein - none -
fig|6666666.67457.peg.2637 CDS gi|227861044|gb|ACLI01000014.1| 29041 28187 -1 - 855 FIG00546798: hypothetical protein - none -
fig|6666666.67457.peg.2638 CDS gi|227861045|gb|ACLI01000013.1| 564 199 -3 - 366 FIG00544939: hypothetical protein - none -
fig|6666666.67457.peg.2639 CDS gi|227861045|gb|ACLI01000013.1| 1714 578 -1 - 1137 Possible membrane protein - none -
fig|6666666.67457.peg.2640 CDS gi|227861045|gb|ACLI01000013.1| 4049 1725 -2 - 2325 putative integral membrane protein - none -
fig|6666666.67457.peg.2641 CDS gi|227861045|gb|ACLI01000013.1| 4742 4056 -2 - 687 FIG00546304: hypothetical protein - none -
fig|6666666.67457.peg.2642 CDS gi|227861045|gb|ACLI01000013.1| 5506 4742 -1 - 765 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67457.peg.2643 CDS gi|227861045|gb|ACLI01000013.1| 6824 5643 -2 - 1182 FIG00544860: hypothetical protein - none -
fig|6666666.67457.peg.2644 CDS gi|227861045|gb|ACLI01000013.1| 7007 8182 2 + 1176 hypothetical protein - none -
fig|6666666.67457.peg.2645 CDS gi|227861045|gb|ACLI01000013.1| 8190 8579 3 + 390 hypothetical protein - none -
fig|6666666.67457.peg.2646 CDS gi|227861045|gb|ACLI01000013.1| 8655 10535 3 + 1881 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67457.peg.2647 CDS gi|227861045|gb|ACLI01000013.1| 11035 10793 -1 - 243 hypothetical protein - none -
fig|6666666.67457.peg.2648 CDS gi|227861045|gb|ACLI01000013.1| 11051 11923 2 + 873 hypothetical protein - none -
fig|6666666.67457.peg.2649 CDS gi|227861045|gb|ACLI01000013.1| 12419 13924 2 + 1506 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67457.peg.2650 CDS gi|227861045|gb|ACLI01000013.1| 14759 13974 -2 - 786 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67457.peg.2651 CDS gi|227861045|gb|ACLI01000013.1| 15370 14744 -1 - 627 FIG00544293: hypothetical protein - none -
fig|6666666.67457.peg.2652 CDS gi|227861045|gb|ACLI01000013.1| 15946 15428 -1 - 519 hypothetical protein - none -
fig|6666666.67457.peg.2653 CDS gi|227861045|gb|ACLI01000013.1| 16248 17864 3 + 1617 hypothetical protein - none -
fig|6666666.67457.peg.2654 CDS gi|227861045|gb|ACLI01000013.1| 17932 19059 1 + 1128 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67457.peg.2655 CDS gi|227861045|gb|ACLI01000013.1| 19803 19012 -3 - 792 FIG00547077: hypothetical protein - none -
fig|6666666.67457.peg.2656 CDS gi|227861046|gb|ACLI01000012.1| 1180 221 -1 - 960 Transcriptional regulator, AsnC family - none -
fig|6666666.67457.peg.2657 CDS gi|227861046|gb|ACLI01000012.1| 1455 2213 3 + 759 hypothetical protein - none -
fig|6666666.67457.peg.2658 CDS gi|227861046|gb|ACLI01000012.1| 2261 3037 2 + 777 FIG00996726: hypothetical protein - none -
fig|6666666.67457.peg.2659 CDS gi|227861046|gb|ACLI01000012.1| 3087 4292 3 + 1206 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67457.peg.2660 CDS gi|227861046|gb|ACLI01000012.1| 5188 4277 -1 - 912 Sortase A, LPXTG specific Sortase
fig|6666666.67457.peg.2661 CDS gi|227861046|gb|ACLI01000012.1| 8122 5189 -1 - 2934 FIG00548000: hypothetical protein - none -
fig|6666666.67457.peg.2662 CDS gi|227861046|gb|ACLI01000012.1| 9233 8127 -2 - 1107 FIG00548123: hypothetical protein - none -
fig|6666666.67457.peg.2663 CDS gi|227861046|gb|ACLI01000012.1| 10024 9230 -1 - 795 Sortase A, LPXTG specific Sortase
fig|6666666.67457.peg.2664 CDS gi|227861046|gb|ACLI01000012.1| 11758 10205 -1 - 1554 putative surface-anchored protein - none -
fig|6666666.67457.peg.2665 CDS gi|227861046|gb|ACLI01000012.1| 12319 12206 -1 - 114 hypothetical protein - none -
fig|6666666.67457.peg.2666 CDS gi|227861046|gb|ACLI01000012.1| 13122 12394 -3 - 729 Putative conserved integral membrane protein - none -
fig|6666666.67457.peg.2667 CDS gi|227861046|gb|ACLI01000012.1| 14324 13119 -2 - 1206 putative amidase - none -
fig|6666666.67457.peg.2668 CDS gi|227861046|gb|ACLI01000012.1| 14329 15255 1 + 927 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67457.peg.2669 CDS gi|227861046|gb|ACLI01000012.1| 15260 15940 2 + 681 putative phosphoglycerate mutase - none -
fig|6666666.67457.peg.2670 CDS gi|227861046|gb|ACLI01000012.1| 16038 16595 3 + 558 hypothetical protein - none -
fig|6666666.67457.peg.2671 CDS gi|227861046|gb|ACLI01000012.1| 17039 16836 -2 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67457.peg.2672 CDS gi|227861046|gb|ACLI01000012.1| 17685 17545 -3 - 141 hypothetical protein - none -
fig|6666666.67457.peg.2673 CDS gi|227861046|gb|ACLI01000012.1| 17719 19179 1 + 1461 FIG00549989: hypothetical protein - none -
fig|6666666.67457.peg.2674 CDS gi|227861046|gb|ACLI01000012.1| 19653 19309 -3 - 345 FIG00544953: hypothetical protein - none -
fig|6666666.67457.peg.2675 CDS gi|227861046|gb|ACLI01000012.1| 20761 19688 -1 - 1074 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67457.peg.2676 CDS gi|227861046|gb|ACLI01000012.1| 21558 20782 -3 - 777 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.67457.peg.2677 CDS gi|227861046|gb|ACLI01000012.1| 21701 22960 2 + 1260 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67457.peg.2678 CDS gi|227861046|gb|ACLI01000012.1| 22972 23898 1 + 927 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.2679 CDS gi|227861046|gb|ACLI01000012.1| 23904 24743 3 + 840 hypothetical protein - none -
fig|6666666.67457.peg.2680 CDS gi|227861046|gb|ACLI01000012.1| 25105 24782 -1 - 324 hypothetical protein - none -
fig|6666666.67457.peg.2681 CDS gi|227861046|gb|ACLI01000012.1| 25016 26515 2 + 1500 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67457.peg.2682 CDS gi|227861046|gb|ACLI01000012.1| 28703 26595 -2 - 2109 FIG00544841: hypothetical protein - none -
fig|6666666.67457.peg.2683 CDS gi|227861046|gb|ACLI01000012.1| 29023 28814 -1 - 210 hypothetical protein - none -
fig|6666666.67457.peg.2684 CDS gi|227861046|gb|ACLI01000012.1| 29075 30280 2 + 1206 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67457.peg.2685 CDS gi|227861046|gb|ACLI01000012.1| 30428 30925 2 + 498 FIG00547642: hypothetical protein - none -
fig|6666666.67457.peg.2686 CDS gi|227861046|gb|ACLI01000012.1| 30922 31440 1 + 519 membrane-associated phospholipid phosphatase - none -
fig|6666666.67457.peg.2687 CDS gi|227861046|gb|ACLI01000012.1| 32782 31397 -1 - 1386 FIG00545828: hypothetical protein - none -
fig|6666666.67457.peg.2688 CDS gi|227861046|gb|ACLI01000012.1| 34165 32837 -1 - 1329 putative transport protein - none -
fig|6666666.67457.peg.2689 CDS gi|227861046|gb|ACLI01000012.1| 34495 36486 1 + 1992 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67457.peg.2690 CDS gi|227861046|gb|ACLI01000012.1| 36476 36982 2 + 507 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67457.peg.2691 CDS gi|227861046|gb|ACLI01000012.1| 36979 38004 1 + 1026 putative membrane protein - none -
fig|6666666.67457.peg.2692 CDS gi|227861046|gb|ACLI01000012.1| 38459 40456 2 + 1998 hypothetical protein Rv3805c - none -
fig|6666666.67457.peg.2693 CDS gi|227861046|gb|ACLI01000012.1| 40597 41622 1 + 1026 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67457.peg.2694 CDS gi|227861046|gb|ACLI01000012.1| 42109 44118 1 + 2010 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67457.peg.2695 CDS gi|227861046|gb|ACLI01000012.1| 44121 44648 3 + 528 FIG00544389: hypothetical protein - none -
fig|6666666.67457.peg.2696 CDS gi|227861046|gb|ACLI01000012.1| 44652 45572 3 + 921 hypothetical protein Rv3802c - none -
fig|6666666.67457.peg.2697 CDS gi|227861046|gb|ACLI01000012.1| 45780 47633 3 + 1854 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67457.peg.2698 CDS gi|227861046|gb|ACLI01000012.1| 48003 52937 3 + 4935 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67457.peg.2699 CDS gi|227861046|gb|ACLI01000012.1| 52955 54508 2 + 1554 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.67457.peg.2700 CDS gi|227861047|gb|ACLI01000011.1| 269 111 -2 - 159 hypothetical protein - none -
fig|6666666.67457.peg.2701 CDS gi|227861047|gb|ACLI01000011.1| 318 1280 3 + 963 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate
fig|6666666.67457.peg.2702 CDS gi|227861047|gb|ACLI01000011.1| 1383 3275 3 + 1893 Pyruvate kinase family protein - none -
fig|6666666.67457.peg.2703 CDS gi|227861047|gb|ACLI01000011.1| 4001 3297 -2 - 705 hypothetical protein - none -
fig|6666666.67457.peg.2704 CDS gi|227861047|gb|ACLI01000011.1| 4473 5246 3 + 774 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67457.peg.2705 CDS gi|227861047|gb|ACLI01000011.1| 5230 6144 1 + 915 FIG00544431: hypothetical protein - none -
fig|6666666.67457.peg.2706 CDS gi|227861047|gb|ACLI01000011.1| 6551 6243 -2 - 309 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67457.peg.2707 CDS gi|227861047|gb|ACLI01000011.1| 6733 6548 -1 - 186 FIG022160: hypothetical toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67457.peg.2708 CDS gi|227861047|gb|ACLI01000011.1| 7963 7004 -1 - 960 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67457.peg.2709 CDS gi|227861048|gb|ACLI01000010.1| 1476 793 -3 - 684 Lactate-responsive regulator LldR in Actinobacteria, GntR family Lactate utilization
fig|6666666.67457.peg.2710 CDS gi|227861048|gb|ACLI01000010.1| 2069 1524 -2 - 546 FIG00548635: hypothetical protein - none -
fig|6666666.67457.peg.2711 CDS gi|227861048|gb|ACLI01000010.1| 2792 2148 -2 - 645 FIG00547651: hypothetical protein - none -
fig|6666666.67457.peg.2712 CDS gi|227861048|gb|ACLI01000010.1| 4617 3073 -3 - 1545 Predicted membrane protein (DUF2319) - none -
fig|6666666.67457.peg.2713 CDS gi|227861049|gb|ACLI01000009.1| 1043 117 -2 - 927 Similar to ribosomal large subunit pseudouridine synthase D, type RluD4 RNA pseudouridine syntheses
fig|6666666.67457.peg.2714 CDS gi|227861049|gb|ACLI01000009.1| 1117 1254 1 + 138 FIG00544217: hypothetical protein - none -
fig|6666666.67457.peg.2715 CDS gi|227861049|gb|ACLI01000009.1| 1305 2255 3 + 951 alkanal monooxygenase-like protein - none -
fig|6666666.67457.peg.2716 CDS gi|227861049|gb|ACLI01000009.1| 2414 3304 2 + 891 Universal stress protein family - none -
fig|6666666.67457.peg.2717 CDS gi|227861049|gb|ACLI01000009.1| 3534 3791 3 + 258 FIG00545001: hypothetical protein - none -
fig|6666666.67457.peg.2718 CDS gi|227861049|gb|ACLI01000009.1| 4102 4740 1 + 639 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.2719 CDS gi|227861049|gb|ACLI01000009.1| 5982 4789 -3 - 1194 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67457.peg.2720 CDS gi|227861049|gb|ACLI01000009.1| 6191 7063 2 + 873 FIG054872: Sortase-like protein - none -
fig|6666666.67457.peg.2721 CDS gi|227861049|gb|ACLI01000009.1| 7067 7219 2 + 153 FIG060545: short hypothetical protein - none -
fig|6666666.67457.peg.2722 CDS gi|227861049|gb|ACLI01000009.1| 7829 7221 -2 - 609 FIG00544353: hypothetical protein - none -
fig|6666666.67457.peg.2723 CDS gi|227861049|gb|ACLI01000009.1| 7861 9087 1 + 1227 Hemoglobin-dependent two component system, sensory histidine kinase HrrS - none -
fig|6666666.67457.peg.2724 CDS gi|227861049|gb|ACLI01000009.1| 9185 9823 2 + 639 Hemoglobin-dependent two component system response regulator HrrA - none -
fig|6666666.67457.peg.2725 CDS gi|227861049|gb|ACLI01000009.1| 10061 10729 2 + 669 Transcriptional regulator, TetR family - none -
fig|6666666.67457.peg.2726 CDS gi|227861049|gb|ACLI01000009.1| 10760 11569 2 + 810 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67457.peg.2727 CDS gi|227861049|gb|ACLI01000009.1| 11575 12717 1 + 1143 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) - none -
fig|6666666.67457.peg.2728 CDS gi|227861049|gb|ACLI01000009.1| 12768 13517 3 + 750 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC 1.1.1.-) - none -
fig|6666666.67457.peg.2729 CDS gi|227861049|gb|ACLI01000009.1| 13605 16547 3 + 2943 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.67457.peg.2730 CDS gi|227861049|gb|ACLI01000009.1| 16547 17365 2 + 819 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.2731 CDS gi|227861049|gb|ACLI01000009.1| 17368 18228 1 + 861 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67457.peg.2732 CDS gi|227861049|gb|ACLI01000009.1| 18221 18931 2 + 711 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67457.peg.2733 CDS gi|227861049|gb|ACLI01000009.1| 19577 18939 -2 - 639 FIG071084: hypothetical protein - none -
fig|6666666.67457.peg.2734 CDS gi|227861049|gb|ACLI01000009.1| 19684 21204 1 + 1521 FIG00544355: hypothetical protein - none -
fig|6666666.67457.peg.2735 CDS gi|227861049|gb|ACLI01000009.1| 21476 21201 -2 - 276 hypothetical protein - none -
fig|6666666.67457.peg.2736 CDS gi|227861049|gb|ACLI01000009.1| 23347 21692 -1 - 1656 FIG00544207: hypothetical protein - none -
fig|6666666.67457.peg.2737 CDS gi|227861049|gb|ACLI01000009.1| 24786 23545 -3 - 1242 putative transport protein - none -
fig|6666666.67457.peg.2738 CDS gi|227861049|gb|ACLI01000009.1| 24870 25766 3 + 897 putative transcription regulator - none -
fig|6666666.67457.peg.2739 CDS gi|227861049|gb|ACLI01000009.1| 25865 27757 2 + 1893 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.67457.peg.2740 CDS gi|227861049|gb|ACLI01000009.1| 28445 27843 -2 - 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67457.peg.2741 CDS gi|227861049|gb|ACLI01000009.1| 28698 29351 3 + 654 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67457.peg.2742 CDS gi|227861049|gb|ACLI01000009.1| 29377 29928 1 + 552 FIG00545070: hypothetical protein - none -
fig|6666666.67457.peg.2743 CDS gi|227861049|gb|ACLI01000009.1| 31238 29985 -2 - 1254 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.67457.peg.2744 CDS gi|227861049|gb|ACLI01000009.1| 32732 31335 -2 - 1398 putative transport protein - none -
fig|6666666.67457.peg.2745 CDS gi|227861050|gb|ACLI01000008.1| 159 899 3 + 741 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.67457.peg.2746 CDS gi|227861050|gb|ACLI01000008.1| 1044 2087 3 + 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67457.peg.2747 CDS gi|227861050|gb|ACLI01000008.1| 2126 3292 2 + 1167 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67457.peg.2748 CDS gi|227861050|gb|ACLI01000008.1| 3362 4315 2 + 954 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67457.peg.2749 CDS gi|227861050|gb|ACLI01000008.1| 4316 5524 2 + 1209 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67457.peg.2750 CDS gi|227861050|gb|ACLI01000008.1| 5541 6497 3 + 957 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67457.peg.2751 CDS gi|227861050|gb|ACLI01000008.1| 6509 7042 2 + 534 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67457.peg.2752 CDS gi|227861050|gb|ACLI01000008.1| 7174 8379 1 + 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67457.peg.2753 CDS gi|227861050|gb|ACLI01000008.1| 8460 9893 3 + 1434 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67457.peg.2754 CDS gi|227861050|gb|ACLI01000008.1| 10581 10195 -3 - 387 Redox-sensing transcriptional regulator QorR - none -
fig|6666666.67457.peg.2755 CDS gi|227861050|gb|ACLI01000008.1| 10663 11328 1 + 666 Rrf2-linked NADH-flavin reductase - none -
fig|6666666.67457.peg.2756 CDS gi|227861050|gb|ACLI01000008.1| 11480 12628 2 + 1149 FIG00547275: hypothetical protein - none -
fig|6666666.67457.peg.2757 CDS gi|227861050|gb|ACLI01000008.1| 12625 14220 1 + 1596 FIG00543839: hypothetical protein - none -
fig|6666666.67457.peg.2758 CDS gi|227861050|gb|ACLI01000008.1| 14252 14854 2 + 603 FIG00545698: hypothetical protein - none -
fig|6666666.67457.peg.2759 CDS gi|227861050|gb|ACLI01000008.1| 14805 15044 3 + 240 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.67457.peg.2760 CDS gi|227861050|gb|ACLI01000008.1| 15081 16346 3 + 1266 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67457.peg.2761 CDS gi|227861051|gb|ACLI01000007.1| 531 1130 3 + 600 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67457.peg.2762 CDS gi|227861051|gb|ACLI01000007.1| 1159 1353 1 + 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67457.peg.2763 CDS gi|227861051|gb|ACLI01000007.1| 1413 1799 3 + 387 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67457.peg.2764 CDS gi|227861051|gb|ACLI01000007.1| 3238 2024 -1 - 1215 hypothetical protein - none -
fig|6666666.67457.peg.2765 CDS gi|227861051|gb|ACLI01000007.1| 3993 3586 -3 - 408 Ferredoxin Inorganic Sulfur Assimilation;
Soluble cytochromes and functionally related electron carriers
fig|6666666.67457.peg.2766 CDS gi|227861051|gb|ACLI01000007.1| 4217 5119 2 + 903 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67457.peg.2767 CDS gi|227861051|gb|ACLI01000007.1| 5119 5955 1 + 837 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67457.peg.2768 CDS gi|227861051|gb|ACLI01000007.1| 6033 7358 3 + 1326 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67457.peg.2769 CDS gi|227861051|gb|ACLI01000007.1| 7398 8606 3 + 1209 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67457.peg.2770 CDS gi|227861051|gb|ACLI01000007.1| 9319 8609 -1 - 711 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67457.peg.2771 CDS gi|227861051|gb|ACLI01000007.1| 9378 10226 3 + 849 RNA methyltransferase, TrmH family - none -
fig|6666666.67457.peg.2772 CDS gi|227861051|gb|ACLI01000007.1| 10338 11375 3 + 1038 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67457.peg.2773 CDS gi|227861051|gb|ACLI01000007.1| 11420 13927 2 + 2508 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67457.peg.2774 CDS gi|227861051|gb|ACLI01000007.1| 14162 15136 2 + 975 FIG00543941: hypothetical protein - none -
fig|6666666.67457.peg.2775 CDS gi|227861051|gb|ACLI01000007.1| 15140 16576 2 + 1437 putative acyltransferase - none -
fig|6666666.67457.peg.2776 CDS gi|227861052|gb|ACLI01000006.1| 33 1262 3 + 1230 Mobile element protein - none -
fig|6666666.67457.peg.2777 CDS gi|227861052|gb|ACLI01000006.1| 1436 3541 2 + 2106 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67457.peg.2778 CDS gi|227861052|gb|ACLI01000006.1| 3808 4251 1 + 444 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67457.peg.2779 CDS gi|227861052|gb|ACLI01000006.1| 4777 4361 -1 - 417 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67457.peg.2780 CDS gi|227861052|gb|ACLI01000006.1| 7171 4868 -1 - 2304 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67457.peg.2781 CDS gi|227861052|gb|ACLI01000006.1| 7199 7363 2 + 165 hypothetical protein - none -
fig|6666666.67457.peg.2782 CDS gi|227861052|gb|ACLI01000006.1| 8194 7385 -1 - 810 FIG00995839: hypothetical protein - none -
fig|6666666.67457.peg.2783 CDS gi|227861052|gb|ACLI01000006.1| 9115 8435 -1 - 681 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67457.peg.2784 CDS gi|227861052|gb|ACLI01000006.1| 9160 12006 1 + 2847 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67457.peg.2785 CDS gi|227861052|gb|ACLI01000006.1| 13793 12003 -2 - 1791 hypothetical membrane protein - none -
fig|6666666.67457.peg.2786 CDS gi|227861053|gb|ACLI01000005.1| 1892 870 -2 - 1023 putative transcription regulator - none -
fig|6666666.67457.peg.2787 CDS gi|227861053|gb|ACLI01000005.1| 3544 2060 -1 - 1485 D-serine/D-alanine/glycine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67457.peg.2788 CDS gi|227861053|gb|ACLI01000005.1| 4880 3708 -2 - 1173 putative PS1 protein - none -
fig|6666666.67457.peg.2789 CDS gi|227861053|gb|ACLI01000005.1| 5891 5244 -2 - 648 hypothetical protein - none -
fig|6666666.67457.peg.2790 CDS gi|227861053|gb|ACLI01000005.1| 6633 5860 -3 - 774 hypothetical protein - none -
fig|6666666.67457.peg.2791 CDS gi|227861053|gb|ACLI01000005.1| 9060 7963 -3 - 1098 hypothetical protein - none -
fig|6666666.67457.peg.2792 CDS gi|227861054|gb|ACLI01000004.1| 2437 398 -1 - 2040 hypothetical protein - none -
fig|6666666.67457.peg.2793 CDS gi|227861054|gb|ACLI01000004.1| 3482 2652 -2 - 831 FIG00549203: hypothetical protein - none -
fig|6666666.67457.peg.2794 CDS gi|227861054|gb|ACLI01000004.1| 3690 3565 -3 - 126 hypothetical protein - none -
fig|6666666.67457.peg.2795 CDS gi|227861054|gb|ACLI01000004.1| 3739 4641 1 + 903 FIG00547591: hypothetical protein - none -
fig|6666666.67457.peg.2796 CDS gi|227861054|gb|ACLI01000004.1| 4638 5696 3 + 1059 FIG00549115: hypothetical protein - none -
fig|6666666.67457.peg.2797 CDS gi|227861054|gb|ACLI01000004.1| 5693 6658 2 + 966 FIG00547933: hypothetical protein - none -
fig|6666666.67457.peg.2798 CDS gi|227861054|gb|ACLI01000004.1| 6681 7415 3 + 735 hypothetical protein - none -
fig|6666666.67457.peg.2799 CDS gi|227861054|gb|ACLI01000004.1| 7400 7951 2 + 552 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67457.peg.2800 CDS gi|227861054|gb|ACLI01000004.1| 8140 8946 1 + 807 hypothetical protein - none -
fig|6666666.67457.peg.2801 CDS gi|227861054|gb|ACLI01000004.1| 9473 9021 -2 - 453 hypothetical protein - none -
fig|6666666.67457.peg.2802 CDS gi|227861054|gb|ACLI01000004.1| 10234 9554 -1 - 681 hypothetical protein - none -
fig|6666666.67457.peg.2803 CDS gi|227861054|gb|ACLI01000004.1| 10915 10328 -1 - 588 Uncharacterized protein MJ0754 - none -
fig|6666666.67457.peg.2804 CDS gi|227861054|gb|ACLI01000004.1| 11032 11469 1 + 438 hypothetical protein - none -
fig|6666666.67457.peg.2805 CDS gi|227861054|gb|ACLI01000004.1| 12474 11536 -3 - 939 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67457.peg.2806 CDS gi|227861054|gb|ACLI01000004.1| 13983 12505 -3 - 1479 putative transport protein - none -
fig|6666666.67457.peg.2807 CDS gi|227861055|gb|ACLI01000003.1| 436 26 -1 - 411 Mobile element protein - none -
fig|6666666.67457.peg.2808 CDS gi|227861056|gb|ACLI01000002.1| 254 1459 2 + 1206 Mobile element protein - none -
fig|6666666.67457.peg.2809 CDS gi|227861057|gb|ACLI01000001.1| 1306 44 -1 - 1263 Mobile element protein - none -
fig|6666666.67457.rna.1 RNA gi|227860933|gb|ACLI01000125.1| 17165 17093 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.67457.rna.2 RNA gi|227860933|gb|ACLI01000125.1| 17393 17322 -2 - 72 tRNA-Met-CAT - none -
fig|6666666.67457.rna.3 RNA gi|227860933|gb|ACLI01000125.1| 17521 17449 -1 - 73 tRNA-Thr-GGT - none -
fig|6666666.67457.rna.4 RNA gi|227860933|gb|ACLI01000125.1| 18181 18099 -1 - 83 tRNA-Tyr-GTA - none -
fig|6666666.67457.rna.5 RNA gi|227860937|gb|ACLI01000121.1| 130 10 -1 - 121 5S RNA - none -
fig|6666666.67457.rna.6 RNA gi|227860937|gb|ACLI01000121.1| 3337 233 -1 - 3105 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67457.rna.7 RNA gi|227860937|gb|ACLI01000121.1| 5218 3706 -1 - 1513 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67457.rna.8 RNA gi|227860946|gb|ACLI01000112.1| 18310 18238 -1 - 73 tRNA-Ala-TGC - none -
fig|6666666.67457.rna.9 RNA gi|227860946|gb|ACLI01000112.1| 18394 18321 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.67457.rna.10 RNA gi|227860947|gb|ACLI01000111.1| 486 404 -3 - 83 tRNA-Leu-CAG tRNAs
fig|6666666.67457.rna.11 RNA gi|227860952|gb|ACLI01000106.1| 2857 2773 -1 - 85 tRNA-Pseudo-TGA - none -
fig|6666666.67457.rna.12 RNA gi|227860953|gb|ACLI01000105.1| 43093 43177 1 + 85 tRNA-Pseudo-GGA - none -
fig|6666666.67457.rna.13 RNA gi|227860953|gb|ACLI01000105.1| 53454 53367 -3 - 88 tRNA-Ser-CGA tRNAs
fig|6666666.67457.rna.14 RNA gi|227860953|gb|ACLI01000105.1| 56052 55980 -3 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67457.rna.15 RNA gi|227860953|gb|ACLI01000105.1| 58237 58165 -1 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67457.rna.16 RNA gi|227860953|gb|ACLI01000105.1| 58359 58271 -3 - 89 tRNA-Pseudo-GCT - none -
fig|6666666.67457.rna.17 RNA gi|227860957|gb|ACLI01000101.1| 9402 9321 -3 - 82 tRNA-Leu-TAG - none -
fig|6666666.67457.rna.18 RNA gi|227860957|gb|ACLI01000101.1| 39190 39118 -1 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.67457.rna.19 RNA gi|227860957|gb|ACLI01000101.1| 39294 39222 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.67457.rna.20 RNA gi|227860959|gb|ACLI01000099.1| 26222 26149 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.67457.rna.21 RNA gi|227860959|gb|ACLI01000099.1| 26665 26594 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.67457.rna.22 RNA gi|227860959|gb|ACLI01000099.1| 68801 68874 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.67457.rna.23 RNA gi|227860959|gb|ACLI01000099.1| 81424 81496 1 + 73 tRNA-His-GTG - none -
fig|6666666.67457.rna.24 RNA gi|227860959|gb|ACLI01000099.1| 88480 88552 1 + 73 tRNA-Lys-CTT - none -
fig|6666666.67457.rna.25 RNA gi|227860959|gb|ACLI01000099.1| 88646 88718 2 + 73 tRNA-Lys-CTT - none -
fig|6666666.67457.rna.26 RNA gi|227860961|gb|ACLI01000097.1| 7991 7919 -2 - 73 tRNA-Val-TAC - none -
fig|6666666.67457.rna.27 RNA gi|227860961|gb|ACLI01000097.1| 29913 29840 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.67457.rna.28 RNA gi|227860961|gb|ACLI01000097.1| 31705 31777 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.67457.rna.29 RNA gi|227860970|gb|ACLI01000088.1| 27768 27696 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67457.rna.30 RNA gi|227860970|gb|ACLI01000088.1| 27875 27804 -2 - 72 tRNA-Val-GAC tRNAs
fig|6666666.67457.rna.31 RNA gi|227860970|gb|ACLI01000088.1| 27984 27912 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67457.rna.32 RNA gi|227860970|gb|ACLI01000088.1| 28091 28020 -2 - 72 tRNA-Val-GAC tRNAs
fig|6666666.67457.rna.33 RNA gi|227860970|gb|ACLI01000088.1| 28171 28101 -1 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.67457.rna.34 RNA gi|227860970|gb|ACLI01000088.1| 28285 28213 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67457.rna.35 RNA gi|227860970|gb|ACLI01000088.1| 28641 28712 3 + 72 tRNA-Val-CAC tRNAs
fig|6666666.67457.rna.36 RNA gi|227860975|gb|ACLI01000083.1| 61156 61241 1 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.67457.rna.37 RNA gi|227860975|gb|ACLI01000083.1| 61344 61429 3 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.67457.rna.38 RNA gi|227860977|gb|ACLI01000081.1| 3156 3083 -3 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.67457.rna.39 RNA gi|227860985|gb|ACLI01000073.1| 107504 107576 2 + 73 tRNA-Arg-CCT - none -
fig|6666666.67457.rna.40 RNA gi|227860986|gb|ACLI01000072.1| 48046 47973 -1 - 74 tRNA-Leu-TAA - none -
fig|6666666.67457.rna.41 RNA gi|227860986|gb|ACLI01000072.1| 61076 61147 2 + 72 tRNA-Gln-TTG - none -
fig|6666666.67457.rna.42 RNA gi|227861006|gb|ACLI01000052.1| 56487 56414 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.67457.rna.43 RNA gi|227861006|gb|ACLI01000052.1| 57148 57075 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.67457.rna.44 RNA gi|227861009|gb|ACLI01000049.1| 4410 4337 -3 - 74 tRNA-Leu-CAA tRNAs
fig|6666666.67457.rna.45 RNA gi|227861011|gb|ACLI01000047.1| 312 383 3 + 72 tRNA-Gln-CTG - none -
fig|6666666.67457.rna.46 RNA gi|227861011|gb|ACLI01000047.1| 423 495 3 + 73 tRNA-Glu-CTC - none -
fig|6666666.67457.rna.47 RNA gi|227861013|gb|ACLI01000045.1| 72919 72990 1 + 72 tRNA-Gln-CTG - none -
fig|6666666.67457.rna.48 RNA gi|227861013|gb|ACLI01000045.1| 73030 73102 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.67457.rna.49 RNA gi|227861013|gb|ACLI01000045.1| 73901 73973 2 + 73 tRNA-Glu-CTC - none -
fig|6666666.67457.rna.50 RNA gi|227861017|gb|ACLI01000041.1| 28579 28507 -1 - 73 tRNA-Arg-CCG tRNAs
fig|6666666.67457.rna.51 RNA gi|227861027|gb|ACLI01000031.1| 3175 3248 1 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.67457.rna.52 RNA gi|227861030|gb|ACLI01000028.1| 32256 32184 -3 - 73 tRNA-Thr-CGT - none -
fig|6666666.67457.rna.53 RNA gi|227861037|gb|ACLI01000021.1| 27886 27958 1 + 73 tRNA-Thr-TGT - none -
fig|6666666.67457.rna.54 RNA gi|227861037|gb|ACLI01000021.1| 78574 78646 1 + 73 tRNA-Lys-TTT - none -
fig|6666666.67457.rna.55 RNA gi|227861037|gb|ACLI01000021.1| 91206 91278 3 + 73 tRNA-Glu-TTC - none -
fig|6666666.67457.rna.56 RNA gi|227861037|gb|ACLI01000021.1| 91311 91384 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.67457.rna.57 RNA gi|227861037|gb|ACLI01000021.1| 93869 93942 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.67457.rna.58 RNA gi|227861037|gb|ACLI01000021.1| 93975 94047 3 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.67457.rna.59 RNA gi|227861044|gb|ACLI01000014.1| 18751 18681 -1 - 71 tRNA-Gly-CCC tRNAs