fig|6666666.67468.peg.1 CDS gi|344043303|gb|AFYA01000035.1| 2361 457 -3 - 1905 hypothetical protein - none -
fig|6666666.67468.peg.2 CDS gi|344043303|gb|AFYA01000035.1| 4472 2367 -2 - 2106 hypothetical protein - none -
fig|6666666.67468.peg.3 CDS gi|344043303|gb|AFYA01000035.1| 5028 5966 3 + 939 hypothetical protein - none -
fig|6666666.67468.peg.4 CDS gi|344043303|gb|AFYA01000035.1| 5963 6880 2 + 918 hypothetical protein - none -
fig|6666666.67468.peg.5 CDS gi|344043303|gb|AFYA01000035.1| 7496 7029 -2 - 468 Mobile element protein - none -
fig|6666666.67468.peg.6 CDS gi|344043310|gb|AFYA01000034.1| 749 198 -2 - 552 FIG00545622: hypothetical protein - none -
fig|6666666.67468.peg.7 CDS gi|344043310|gb|AFYA01000034.1| 1009 4467 1 + 3459 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.67468.peg.8 CDS gi|344043314|gb|AFYA01000033.1| 1689 586 -3 - 1104 McrBC 5-methylcytosine restriction system component - none -
fig|6666666.67468.peg.9 CDS gi|344043314|gb|AFYA01000033.1| 2792 1656 -2 - 1137 hypothetical protein - none -
fig|6666666.67468.peg.10 CDS gi|344043314|gb|AFYA01000033.1| 3005 3136 2 + 132 hypothetical protein - none -
fig|6666666.67468.peg.11 CDS gi|344043314|gb|AFYA01000033.1| 3896 3129 -2 - 768 hypothetical protein - none -
fig|6666666.67468.peg.12 CDS gi|344043314|gb|AFYA01000033.1| 5269 4361 -1 - 909 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67468.peg.13 CDS gi|344043314|gb|AFYA01000033.1| 5532 5266 -3 - 267 putative DNA-binding protein - none -
fig|6666666.67468.peg.14 CDS gi|344043314|gb|AFYA01000033.1| 5503 6318 1 + 816 hypothetical protein - none -
fig|6666666.67468.peg.15 CDS gi|344043314|gb|AFYA01000033.1| 6943 6812 -1 - 132 hypothetical protein - none -
fig|6666666.67468.peg.16 CDS gi|344043314|gb|AFYA01000033.1| 7366 6977 -1 - 390 Mercuric resistance operon regulatory protein Mercury resistance operon
fig|6666666.67468.peg.17 CDS gi|344043314|gb|AFYA01000033.1| 7465 8886 1 + 1422 Mercuric ion reductase (EC 1.16.1.1) Mercuric reductase;
Mercury resistance operon
fig|6666666.67468.peg.18 CDS gi|344043314|gb|AFYA01000033.1| 9738 9145 -3 - 594 cadmium resistance transporter, putative - none -
fig|6666666.67468.peg.19 CDS gi|344043314|gb|AFYA01000033.1| 10046 9738 -2 - 309 Transcriptional regulator, ArsR family - none -
fig|6666666.67468.peg.20 CDS gi|344043314|gb|AFYA01000033.1| 10485 10186 -3 - 300 hypothetical protein - none -
fig|6666666.67468.peg.21 CDS gi|344043314|gb|AFYA01000033.1| 10447 11073 1 + 627 Resolvase/integrase Bin - none -
fig|6666666.67468.peg.22 CDS gi|344043314|gb|AFYA01000033.1| 13734 12172 -3 - 1563 SCD82.01c, unknown (fragment), len: >275 aa SCD39.30c, hypothetical protein (fragment), len: >179 aa. Low G+C content (53.78%) - none -
fig|6666666.67468.peg.23 CDS gi|344043314|gb|AFYA01000033.1| 14003 13737 -2 - 267 hypothetical protein - none -
fig|6666666.67468.peg.24 CDS gi|344043329|gb|AFYA01000032.1| 1240 314 -1 - 927 putative transcription regulator - none -
fig|6666666.67468.peg.25 CDS gi|344043329|gb|AFYA01000032.1| 1318 2556 1 + 1239 putative transport protein - none -
fig|6666666.67468.peg.26 CDS gi|344043329|gb|AFYA01000032.1| 2671 4212 1 + 1542 FIG00544207: hypothetical protein - none -
fig|6666666.67468.peg.27 CDS gi|344043329|gb|AFYA01000032.1| 5660 4245 -2 - 1416 FIG00544355: hypothetical protein - none -
fig|6666666.67468.peg.28 CDS gi|344043329|gb|AFYA01000032.1| 5855 6490 2 + 636 FIG071084: hypothetical protein - none -
fig|6666666.67468.peg.29 CDS gi|344043329|gb|AFYA01000032.1| 7054 6515 -1 - 540 FIG00548667: hypothetical protein - none -
fig|6666666.67468.peg.30 CDS gi|344043329|gb|AFYA01000032.1| 7584 7997 3 + 414 Mobile element protein - none -
fig|6666666.67468.peg.31 CDS gi|344043329|gb|AFYA01000032.1| 8781 8044 -3 - 738 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.32 CDS gi|344043329|gb|AFYA01000032.1| 9823 8768 -1 - 1056 FIG00548667: hypothetical protein - none -
fig|6666666.67468.peg.33 CDS gi|344043329|gb|AFYA01000032.1| 9879 10337 3 + 459 FIG01128042: hypothetical protein - none -
fig|6666666.67468.peg.34 CDS gi|344043329|gb|AFYA01000032.1| 11090 10452 -2 - 639 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.35 CDS gi|344043329|gb|AFYA01000032.1| 12523 11189 -1 - 1335 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.36 CDS gi|344043329|gb|AFYA01000032.1| 12522 13073 3 + 552 FIG00544353: hypothetical protein - none -
fig|6666666.67468.peg.37 CDS gi|344043329|gb|AFYA01000032.1| 13229 13077 -2 - 153 FIG060545: short hypothetical protein - none -
fig|6666666.67468.peg.38 CDS gi|344043329|gb|AFYA01000032.1| 14054 13230 -2 - 825 FIG054872: Sortase-like protein - none -
fig|6666666.67468.peg.39 CDS gi|344043329|gb|AFYA01000032.1| 14286 15554 3 + 1269 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67468.peg.40 CDS gi|344043329|gb|AFYA01000032.1| 16568 16305 -2 - 264 FIG00545001: hypothetical protein - none -
fig|6666666.67468.peg.41 CDS gi|344043329|gb|AFYA01000032.1| 17953 17048 -1 - 906 Universal stress protein family - none -
fig|6666666.67468.peg.42 CDS gi|344043329|gb|AFYA01000032.1| 18821 18090 -2 - 732 alkanal monooxygenase-like protein - none -
fig|6666666.67468.peg.43 CDS gi|344043329|gb|AFYA01000032.1| 19037 18849 -2 - 189 alkanal monooxygenase-like protein - none -
fig|6666666.67468.peg.44 CDS gi|344043329|gb|AFYA01000032.1| 19229 19089 -2 - 141 FIG00544217: hypothetical protein - none -
fig|6666666.67468.peg.45 CDS gi|344043329|gb|AFYA01000032.1| 19258 20226 1 + 969 Similar to ribosomal large subunit pseudouridine synthase D, type RluD4 RNA pseudouridine syntheses
fig|6666666.67468.peg.46 CDS gi|344043329|gb|AFYA01000032.1| 20638 20820 1 + 183 hypothetical protein - none -
fig|6666666.67468.peg.47 CDS gi|344043329|gb|AFYA01000032.1| 20813 22225 2 + 1413 Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein - none -
fig|6666666.67468.peg.48 CDS gi|344043329|gb|AFYA01000032.1| 22953 24050 3 + 1098 hypothetical protein - none -
fig|6666666.67468.peg.49 CDS gi|344043329|gb|AFYA01000032.1| 25125 24055 -3 - 1071 Putative nitrile hydratase regulator clustered with urea transport - none -
fig|6666666.67468.peg.50 CDS gi|344043329|gb|AFYA01000032.1| 25240 25716 1 + 477 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.51 CDS gi|344043329|gb|AFYA01000032.1| 25736 25867 2 + 132 hypothetical protein - none -
fig|6666666.67468.peg.52 CDS gi|344043361|gb|AFYA01000031.1| 591 376 -3 - 216 FIG00544089: hypothetical protein - none -
fig|6666666.67468.peg.53 CDS gi|344043361|gb|AFYA01000031.1| 1934 813 -2 - 1122 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67468.peg.54 CDS gi|344043361|gb|AFYA01000031.1| 2024 2968 2 + 945 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67468.peg.55 CDS gi|344043361|gb|AFYA01000031.1| 3926 3237 -2 - 690 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67468.peg.56 CDS gi|344043361|gb|AFYA01000031.1| 3925 5043 1 + 1119 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.67468.peg.57 CDS gi|344043361|gb|AFYA01000031.1| 5801 5040 -2 - 762 FIG00544976: hypothetical protein - none -
fig|6666666.67468.peg.58 CDS gi|344043361|gb|AFYA01000031.1| 5885 6763 2 + 879 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67468.peg.59 CDS gi|344043361|gb|AFYA01000031.1| 7058 8185 2 + 1128 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67468.peg.60 CDS gi|344043361|gb|AFYA01000031.1| 8330 9397 2 + 1068 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67468.peg.61 CDS gi|344043361|gb|AFYA01000031.1| 9412 10335 1 + 924 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67468.peg.62 CDS gi|344043361|gb|AFYA01000031.1| 10371 11144 3 + 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67468.peg.63 CDS gi|344043361|gb|AFYA01000031.1| 11960 11226 -2 - 735 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67468.peg.64 CDS gi|344043361|gb|AFYA01000031.1| 13220 12075 -2 - 1146 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67468.peg.65 CDS gi|344043361|gb|AFYA01000031.1| 13300 13419 1 + 120 hypothetical protein - none -
fig|6666666.67468.peg.66 CDS gi|344043361|gb|AFYA01000031.1| 13712 15220 2 + 1509 putative coenzyme A transferase - none -
fig|6666666.67468.peg.67 CDS gi|344043361|gb|AFYA01000031.1| 15705 16391 3 + 687 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67468.peg.68 CDS gi|344043361|gb|AFYA01000031.1| 16462 17199 1 + 738 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - none -
fig|6666666.67468.peg.69 CDS gi|344043378|gb|AFYA01000030.1| 537 340 -3 - 198 hypothetical protein - none -
fig|6666666.67468.peg.70 CDS gi|344043378|gb|AFYA01000030.1| 956 741 -2 - 216 hypothetical protein - none -
fig|6666666.67468.peg.71 CDS gi|344043378|gb|AFYA01000030.1| 1694 1545 -2 - 150 hypothetical protein - none -
fig|6666666.67468.peg.72 CDS gi|344043378|gb|AFYA01000030.1| 2144 2299 2 + 156 hypothetical protein - none -
fig|6666666.67468.peg.73 CDS gi|344043378|gb|AFYA01000030.1| 2410 2270 -1 - 141 hypothetical protein - none -
fig|6666666.67468.peg.74 CDS gi|344043378|gb|AFYA01000030.1| 4359 3133 -3 - 1227 hypothetical protein - none -
fig|6666666.67468.peg.75 CDS gi|344043385|gb|AFYA01000029.1| 1031 96 -2 - 936 putative oxidoreductase - none -
fig|6666666.67468.peg.76 CDS gi|344043388|gb|AFYA01000028.1| 626 1093 2 + 468 universal stress protein UspA - none -
fig|6666666.67468.peg.77 CDS gi|344043388|gb|AFYA01000028.1| 2469 1207 -3 - 1263 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67468.peg.78 CDS gi|344043388|gb|AFYA01000028.1| 2676 2497 -3 - 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.67468.peg.79 CDS gi|344043388|gb|AFYA01000028.1| 3336 2722 -3 - 615 FIG00545698: hypothetical protein - none -
fig|6666666.67468.peg.80 CDS gi|344043388|gb|AFYA01000028.1| 4486 3323 -1 - 1164 FIG00543839: hypothetical protein - none -
fig|6666666.67468.peg.81 CDS gi|344043388|gb|AFYA01000028.1| 5986 4553 -1 - 1434 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67468.peg.82 CDS gi|344043388|gb|AFYA01000028.1| 7252 6047 -1 - 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67468.peg.83 CDS gi|344043388|gb|AFYA01000028.1| 7935 7420 -3 - 516 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67468.peg.84 CDS gi|344043388|gb|AFYA01000028.1| 8898 7939 -3 - 960 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67468.peg.85 CDS gi|344043388|gb|AFYA01000028.1| 10087 8912 -1 - 1176 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67468.peg.86 CDS gi|344043388|gb|AFYA01000028.1| 11041 10088 -1 - 954 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67468.peg.87 CDS gi|344043388|gb|AFYA01000028.1| 12253 11087 -1 - 1167 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67468.peg.88 CDS gi|344043388|gb|AFYA01000028.1| 13380 12337 -3 - 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67468.peg.89 CDS gi|344043388|gb|AFYA01000028.1| 13930 13526 -1 - 405 hypothetical protein - none -
fig|6666666.67468.peg.90 CDS gi|344043388|gb|AFYA01000028.1| 15329 13944 -2 - 1386 putative acyltransferase - none -
fig|6666666.67468.peg.91 CDS gi|344043388|gb|AFYA01000028.1| 16306 15332 -1 - 975 FIG00543941: hypothetical protein - none -
fig|6666666.67468.peg.92 CDS gi|344043388|gb|AFYA01000028.1| 19321 16814 -1 - 2508 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67468.peg.93 CDS gi|344043388|gb|AFYA01000028.1| 20401 19364 -1 - 1038 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67468.peg.94 CDS gi|344043388|gb|AFYA01000028.1| 21303 20482 -3 - 822 FIG011178: rRNA methylase RNA methylation
fig|6666666.67468.peg.95 CDS gi|344043388|gb|AFYA01000028.1| 21379 22086 1 + 708 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67468.peg.96 CDS gi|344043388|gb|AFYA01000028.1| 23318 22092 -2 - 1227 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67468.peg.97 CDS gi|344043388|gb|AFYA01000028.1| 24675 23359 -3 - 1317 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67468.peg.98 CDS gi|344043388|gb|AFYA01000028.1| 25599 24763 -3 - 837 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67468.peg.99 CDS gi|344043388|gb|AFYA01000028.1| 26372 25596 -2 - 777 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67468.peg.100 CDS gi|344043388|gb|AFYA01000028.1| 27271 26723 -1 - 549 hypothetical protein - none -
fig|6666666.67468.peg.101 CDS gi|344043388|gb|AFYA01000028.1| 27819 27436 -3 - 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67468.peg.102 CDS gi|344043388|gb|AFYA01000028.1| 28075 27881 -1 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67468.peg.103 CDS gi|344043388|gb|AFYA01000028.1| 28673 28104 -2 - 570 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67468.peg.104 CDS gi|344043388|gb|AFYA01000028.1| 29018 31144 2 + 2127 hypothetical membrane protein - none -
fig|6666666.67468.peg.105 CDS gi|344043388|gb|AFYA01000028.1| 33977 31128 -2 - 2850 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67468.peg.106 CDS gi|344043388|gb|AFYA01000028.1| 34095 33970 -3 - 126 hypothetical protein - none -
fig|6666666.67468.peg.107 CDS gi|344043388|gb|AFYA01000028.1| 34114 34674 1 + 561 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67468.peg.108 CDS gi|344043388|gb|AFYA01000028.1| 34878 35792 3 + 915 FIG00995839: hypothetical protein - none -
fig|6666666.67468.peg.109 CDS gi|344043388|gb|AFYA01000028.1| 35988 38255 3 + 2268 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67468.peg.110 CDS gi|344043388|gb|AFYA01000028.1| 39108 38260 -3 - 849 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.67468.peg.111 CDS gi|344043388|gb|AFYA01000028.1| 39317 39598 2 + 282 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.67468.peg.112 CDS gi|344043388|gb|AFYA01000028.1| 40128 39685 -3 - 444 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67468.peg.113 CDS gi|344043388|gb|AFYA01000028.1| 42358 40259 -1 - 2100 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67468.peg.114 CDS gi|344043388|gb|AFYA01000028.1| 42412 42540 1 + 129 hypothetical protein - none -
fig|6666666.67468.peg.115 CDS gi|344043388|gb|AFYA01000028.1| 43572 42913 -3 - 660 hypothetical protein - none -
fig|6666666.67468.peg.116 CDS gi|344043388|gb|AFYA01000028.1| 43852 44892 1 + 1041 Ribose operon repressor D-ribose utilization
fig|6666666.67468.peg.117 CDS gi|344043388|gb|AFYA01000028.1| 44885 45808 2 + 924 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67468.peg.118 CDS gi|344043388|gb|AFYA01000028.1| 45876 47273 3 + 1398 putative transport protein - none -
fig|6666666.67468.peg.119 CDS gi|344043388|gb|AFYA01000028.1| 47305 48243 1 + 939 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.120 CDS gi|344043388|gb|AFYA01000028.1| 48722 48240 -2 - 483 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67468.peg.121 CDS gi|344043388|gb|AFYA01000028.1| 49149 48790 -3 - 360 hypothetical protein - none -
fig|6666666.67468.peg.122 CDS gi|344043388|gb|AFYA01000028.1| 50091 49189 -3 - 903 DNA polymerase III, epsilon subunit - none -
fig|6666666.67468.peg.123 CDS gi|344043388|gb|AFYA01000028.1| 50766 50164 -3 - 603 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67468.peg.124 CDS gi|344043388|gb|AFYA01000028.1| 52838 50814 -2 - 2025 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.67468.peg.125 CDS gi|344043388|gb|AFYA01000028.1| 53169 53294 3 + 126 hypothetical protein - none -
fig|6666666.67468.peg.126 CDS gi|344043388|gb|AFYA01000028.1| 54957 53497 -3 - 1461 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.67468.peg.127 CDS gi|344043388|gb|AFYA01000028.1| 55149 55988 3 + 840 FIG00544865: hypothetical protein - none -
fig|6666666.67468.peg.128 CDS gi|344043388|gb|AFYA01000028.1| 57235 56360 -1 - 876 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67468.peg.129 CDS gi|344043388|gb|AFYA01000028.1| 58215 57238 -3 - 978 putative DNA-binding protein - none -
fig|6666666.67468.peg.130 CDS gi|344043388|gb|AFYA01000028.1| 58252 59652 1 + 1401 FIG00546935: hypothetical protein - none -
fig|6666666.67468.peg.131 CDS gi|344043388|gb|AFYA01000028.1| 62318 59649 -2 - 2670 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67468.peg.132 CDS gi|344043388|gb|AFYA01000028.1| 63228 63488 3 + 261 hypothetical membrane protein - none -
fig|6666666.67468.peg.133 CDS gi|344043388|gb|AFYA01000028.1| 63760 63536 -1 - 225 hypothetical protein - none -
fig|6666666.67468.peg.134 CDS gi|344043388|gb|AFYA01000028.1| 64111 64677 1 + 567 FIG00547456: hypothetical protein - none -
fig|6666666.67468.peg.135 CDS gi|344043388|gb|AFYA01000028.1| 64687 64995 1 + 309 hypothetical membrane protein - none -
fig|6666666.67468.peg.136 CDS gi|344043388|gb|AFYA01000028.1| 65100 66050 3 + 951 hypothetical protein - none -
fig|6666666.67468.peg.137 CDS gi|344043388|gb|AFYA01000028.1| 66515 66384 -2 - 132 hypothetical protein - none -
fig|6666666.67468.peg.138 CDS gi|344043388|gb|AFYA01000028.1| 68578 68949 1 + 372 FIG00546213: hypothetical protein - none -
fig|6666666.67468.peg.139 CDS gi|344043388|gb|AFYA01000028.1| 70820 70701 -2 - 120 hypothetical protein - none -
fig|6666666.67468.peg.140 CDS gi|344043388|gb|AFYA01000028.1| 71539 70925 -1 - 615 FIG00544367: hypothetical protein - none -
fig|6666666.67468.peg.141 CDS gi|344043388|gb|AFYA01000028.1| 71645 71953 2 + 309 Mobile element protein - none -
fig|6666666.67468.peg.142 CDS gi|344043388|gb|AFYA01000028.1| 71950 72846 1 + 897 Mobile element protein - none -
fig|6666666.67468.peg.143 CDS gi|344043388|gb|AFYA01000028.1| 74604 74152 -3 - 453 hypothetical protein - none -
fig|6666666.67468.peg.144 CDS gi|344043388|gb|AFYA01000028.1| 75819 76049 3 + 231 integrase - none -
fig|6666666.67468.peg.145 CDS gi|344043388|gb|AFYA01000028.1| 76697 77677 2 + 981 Putative membrane protein - none -
fig|6666666.67468.peg.146 CDS gi|344043388|gb|AFYA01000028.1| 78569 77760 -2 - 810 FIG00546948: hypothetical protein - none -
fig|6666666.67468.peg.147 CDS gi|344043388|gb|AFYA01000028.1| 78669 79673 3 + 1005 Putative secreted protein - none -
fig|6666666.67468.peg.148 CDS gi|344043388|gb|AFYA01000028.1| 79716 80666 3 + 951 amino acid ABC transporter, permease protein (glnP) - none -
fig|6666666.67468.peg.149 CDS gi|344043388|gb|AFYA01000028.1| 80670 81434 3 + 765 ATP-binding protein - none -
fig|6666666.67468.peg.150 CDS gi|344043388|gb|AFYA01000028.1| 82488 82006 -3 - 483 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.67468.peg.151 CDS gi|344043388|gb|AFYA01000028.1| 83076 82492 -3 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.67468.peg.152 CDS gi|344043388|gb|AFYA01000028.1| 83291 83076 -2 - 216 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.153 CDS gi|344043388|gb|AFYA01000028.1| 85434 83311 -3 - 2124 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67468.peg.154 CDS gi|344043388|gb|AFYA01000028.1| 87142 85439 -1 - 1704 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.155 CDS gi|344043388|gb|AFYA01000028.1| 87903 87154 -3 - 750 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67468.peg.156 CDS gi|344043388|gb|AFYA01000028.1| 88892 87903 -2 - 990 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67468.peg.157 CDS gi|344043388|gb|AFYA01000028.1| 88969 89940 1 + 972 Putative exported protein - none -
fig|6666666.67468.peg.158 CDS gi|344043388|gb|AFYA01000028.1| 91077 89995 -3 - 1083 D-alanine--D-alanine ligase A (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67468.peg.159 CDS gi|344043388|gb|AFYA01000028.1| 92100 91102 -3 - 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.160 CDS gi|344043388|gb|AFYA01000028.1| 92300 92142 -2 - 159 hypothetical protein - none -
fig|6666666.67468.peg.161 CDS gi|344043388|gb|AFYA01000028.1| 92378 93388 2 + 1011 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67468.peg.162 CDS gi|344043388|gb|AFYA01000028.1| 94330 93737 -1 - 594 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67468.peg.163 CDS gi|344043388|gb|AFYA01000028.1| 95794 94349 -1 - 1446 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67468.peg.164 CDS gi|344043388|gb|AFYA01000028.1| 95973 96680 3 + 708 Transcriptional regulator, IclR family - none -
fig|6666666.67468.peg.165 CDS gi|344043388|gb|AFYA01000028.1| 97196 96663 -2 - 534 FIG00546260: hypothetical protein - none -
fig|6666666.67468.peg.166 CDS gi|344043388|gb|AFYA01000028.1| 97865 98569 2 + 705 FIG00546461: hypothetical protein - none -
fig|6666666.67468.peg.167 CDS gi|344043388|gb|AFYA01000028.1| 98677 100086 1 + 1410 FIG00544638: hypothetical protein - none -
fig|6666666.67468.peg.168 CDS gi|344043388|gb|AFYA01000028.1| 100144 100302 1 + 159 FIG00546288: hypothetical protein - none -
fig|6666666.67468.peg.169 CDS gi|344043388|gb|AFYA01000028.1| 100498 102885 1 + 2388 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.170 CDS gi|344043388|gb|AFYA01000028.1| 103559 103098 -2 - 462 hypothetical protein - none -
fig|6666666.67468.peg.171 CDS gi|344043388|gb|AFYA01000028.1| 104583 106346 3 + 1764 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.67468.peg.172 CDS gi|344043388|gb|AFYA01000028.1| 106669 106343 -1 - 327 FIG00549910: hypothetical protein - none -
fig|6666666.67468.peg.173 CDS gi|344043388|gb|AFYA01000028.1| 107820 106666 -3 - 1155 FIG00547898: hypothetical protein - none -
fig|6666666.67468.peg.174 CDS gi|344043492|gb|AFYA01000027.1| 1452 325 -3 - 1128 Transcriptional regulator - none -
fig|6666666.67468.peg.175 CDS gi|344043492|gb|AFYA01000027.1| 1491 2810 3 + 1320 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67468.peg.176 CDS gi|344043492|gb|AFYA01000027.1| 2837 4156 2 + 1320 D-beta-hydroxybutyrate permease Polyhydroxybutyrate metabolism
fig|6666666.67468.peg.177 CDS gi|344043497|gb|AFYA01000026.1| 681 223 -3 - 459 hypothetical protein - none -
fig|6666666.67468.peg.178 CDS gi|344043497|gb|AFYA01000026.1| 2177 681 -2 - 1497 FIG00546571: hypothetical protein - none -
fig|6666666.67468.peg.179 CDS gi|344043500|gb|AFYA01000025.1| 1221 145 -3 - 1077 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67468.peg.180 CDS gi|344043500|gb|AFYA01000025.1| 2060 1221 -2 - 840 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) NAD and NADP cofactor biosynthesis global
fig|6666666.67468.peg.181 CDS gi|344043500|gb|AFYA01000025.1| 3350 2064 -2 - 1287 Quinolinate synthetase (EC 2.5.1.72) NAD and NADP cofactor biosynthesis global
fig|6666666.67468.peg.182 CDS gi|344043500|gb|AFYA01000025.1| 4043 3399 -2 - 645 Nudix-related transcriptional regulator NrtR NAD and NADP cofactor biosynthesis global
fig|6666666.67468.peg.183 CDS gi|344043500|gb|AFYA01000025.1| 4200 5123 3 + 924 FIG00545591: hypothetical protein - none -
fig|6666666.67468.peg.184 CDS gi|344043500|gb|AFYA01000025.1| 5757 5146 -3 - 612 FIG00544130: hypothetical protein - none -
fig|6666666.67468.peg.185 CDS gi|344043500|gb|AFYA01000025.1| 6011 5781 -2 - 231 hypothetical protein - none -
fig|6666666.67468.peg.186 CDS gi|344043500|gb|AFYA01000025.1| 7198 6131 -1 - 1068 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.67468.peg.187 CDS gi|344043500|gb|AFYA01000025.1| 8407 7292 -1 - 1116 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.67468.peg.188 CDS gi|344043500|gb|AFYA01000025.1| 8629 8429 -1 - 201 hypothetical protein - none -
fig|6666666.67468.peg.189 CDS gi|344043500|gb|AFYA01000025.1| 8757 9707 3 + 951 Transcriptional regulator, LysR family - none -
fig|6666666.67468.peg.190 CDS gi|344043500|gb|AFYA01000025.1| 9824 11008 2 + 1185 putative cytochrome P450 hydroxylase - none -
fig|6666666.67468.peg.191 CDS gi|344043500|gb|AFYA01000025.1| 11152 11565 1 + 414 FIG00544525: hypothetical protein - none -
fig|6666666.67468.peg.192 CDS gi|344043500|gb|AFYA01000025.1| 13350 11635 -3 - 1716 FIG01132288: hypothetical protein - none -
fig|6666666.67468.peg.193 CDS gi|344043500|gb|AFYA01000025.1| 13475 14374 2 + 900 beta-lactamase - none -
fig|6666666.67468.peg.194 CDS gi|344043500|gb|AFYA01000025.1| 15647 14427 -2 - 1221 Transporter, MFS superfamily - none -
fig|6666666.67468.peg.195 CDS gi|344043500|gb|AFYA01000025.1| 16640 15756 -2 - 885 Lipase/esterase - none -
fig|6666666.67468.peg.196 CDS gi|344043500|gb|AFYA01000025.1| 17781 16660 -3 - 1122 Salicylate hydroxylase (EC 1.14.13.1) Salicylate and gentisate catabolism;
Salicylate ester degradation
fig|6666666.67468.peg.197 CDS gi|344043500|gb|AFYA01000025.1| 18761 17799 -2 - 963 phosphotriesterase - none -
fig|6666666.67468.peg.198 CDS gi|344043500|gb|AFYA01000025.1| 19684 18776 -1 - 909 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67468.peg.199 CDS gi|344043500|gb|AFYA01000025.1| 20694 19945 -3 - 750 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.200 CDS gi|344043500|gb|AFYA01000025.1| 22143 20848 -3 - 1296 4-hydroxybenzoate transporter Gentisate degradation;
Salicylate and gentisate catabolism;
p-Hydroxybenzoate degradation
fig|6666666.67468.peg.201 CDS gi|344043500|gb|AFYA01000025.1| 23337 22150 -3 - 1188 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) p-Hydroxybenzoate degradation
fig|6666666.67468.peg.202 CDS gi|344043500|gb|AFYA01000025.1| 23724 24329 3 + 606 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67468.peg.203 CDS gi|344043500|gb|AFYA01000025.1| 24330 25670 3 + 1341 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67468.peg.204 CDS gi|344043500|gb|AFYA01000025.1| 25667 26422 2 + 756 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67468.peg.205 CDS gi|344043500|gb|AFYA01000025.1| 26419 26952 1 + 534 FIG00546937: hypothetical protein - none -
fig|6666666.67468.peg.206 CDS gi|344043500|gb|AFYA01000025.1| 26972 28024 2 + 1053 Ca2+/H+ antiporter - none -
fig|6666666.67468.peg.207 CDS gi|344043500|gb|AFYA01000025.1| 28038 28748 3 + 711 FIG00547157: hypothetical protein - none -
fig|6666666.67468.peg.208 CDS gi|344043500|gb|AFYA01000025.1| 29440 28715 -1 - 726 FIG00543997: hypothetical protein - none -
fig|6666666.67468.peg.209 CDS gi|344043500|gb|AFYA01000025.1| 31789 29447 -1 - 2343 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67468.peg.210 CDS gi|344043500|gb|AFYA01000025.1| 31878 32375 3 + 498 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.67468.peg.211 CDS gi|344043500|gb|AFYA01000025.1| 34165 32372 -1 - 1794 FIG00546881: hypothetical protein - none -
fig|6666666.67468.peg.212 CDS gi|344043500|gb|AFYA01000025.1| 35223 34267 -3 - 957 Membrane protein, putative - none -
fig|6666666.67468.peg.213 CDS gi|344043500|gb|AFYA01000025.1| 35292 36194 3 + 903 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67468.peg.214 CDS gi|344043500|gb|AFYA01000025.1| 36344 36580 2 + 237 FIG00548562: hypothetical protein - none -
fig|6666666.67468.peg.215 CDS gi|344043500|gb|AFYA01000025.1| 36657 36980 3 + 324 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67468.peg.216 CDS gi|344043500|gb|AFYA01000025.1| 37381 36992 -1 - 390 FIG00546565: hypothetical protein - none -
fig|6666666.67468.peg.217 CDS gi|344043500|gb|AFYA01000025.1| 38221 37385 -1 - 837 FIG00548480: hypothetical protein - none -
fig|6666666.67468.peg.218 CDS gi|344043500|gb|AFYA01000025.1| 38605 38258 -1 - 348 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67468.peg.219 CDS gi|344043500|gb|AFYA01000025.1| 38633 39838 2 + 1206 FIG00545606: hypothetical protein - none -
fig|6666666.67468.peg.220 CDS gi|344043500|gb|AFYA01000025.1| 40378 39839 -1 - 540 FIG00544603: hypothetical protein - none -
fig|6666666.67468.peg.221 CDS gi|344043500|gb|AFYA01000025.1| 41102 40386 -2 - 717 FIG00544264: hypothetical protein - none -
fig|6666666.67468.peg.222 CDS gi|344043500|gb|AFYA01000025.1| 41481 43394 3 + 1914 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.67468.peg.223 CDS gi|344043500|gb|AFYA01000025.1| 43517 44968 2 + 1452 LpqW - none -
fig|6666666.67468.peg.224 CDS gi|344043500|gb|AFYA01000025.1| 44955 45827 3 + 873 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67468.peg.225 CDS gi|344043500|gb|AFYA01000025.1| 45835 46248 1 + 414 hypothetical membrane protein - none -
fig|6666666.67468.peg.226 CDS gi|344043500|gb|AFYA01000025.1| 46316 46633 2 + 318 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.67468.peg.227 CDS gi|344043500|gb|AFYA01000025.1| 46642 47745 1 + 1104 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.228 CDS gi|344043500|gb|AFYA01000025.1| 47771 48394 2 + 624 FIG00544080: hypothetical protein - none -
fig|6666666.67468.peg.229 CDS gi|344043553|gb|AFYA01000024.1| 203 1306 2 + 1104 PLP-dependent aminotransferase - none -
fig|6666666.67468.peg.230 CDS gi|344043553|gb|AFYA01000024.1| 1942 1301 -1 - 642 FIG00546748: hypothetical protein - none -
fig|6666666.67468.peg.231 CDS gi|344043553|gb|AFYA01000024.1| 3617 1944 -2 - 1674 DNA repair helicase - none -
fig|6666666.67468.peg.232 CDS gi|344043553|gb|AFYA01000024.1| 5868 3667 -3 - 2202 FIG00545438: hypothetical protein - none -
fig|6666666.67468.peg.233 CDS gi|344043553|gb|AFYA01000024.1| 5904 6125 3 + 222 FIG00543815: hypothetical protein - none -
fig|6666666.67468.peg.234 CDS gi|344043553|gb|AFYA01000024.1| 6929 6351 -2 - 579 FIG00996461: hypothetical protein - none -
fig|6666666.67468.peg.235 CDS gi|344043553|gb|AFYA01000024.1| 6918 7181 3 + 264 FIG00544412: hypothetical protein - none -
fig|6666666.67468.peg.236 CDS gi|344043553|gb|AFYA01000024.1| 7485 7868 3 + 384 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67468.peg.237 CDS gi|344043553|gb|AFYA01000024.1| 8450 7923 -2 - 528 FIG00545981: hypothetical protein - none -
fig|6666666.67468.peg.238 CDS gi|344043553|gb|AFYA01000024.1| 9238 8462 -1 - 777 glutamine cyclotransferase - none -
fig|6666666.67468.peg.239 CDS gi|344043553|gb|AFYA01000024.1| 9966 9265 -3 - 702 FIG00543838: hypothetical protein - none -
fig|6666666.67468.peg.240 CDS gi|344043553|gb|AFYA01000024.1| 10081 10209 1 + 129 hypothetical protein - none -
fig|6666666.67468.peg.241 CDS gi|344043553|gb|AFYA01000024.1| 10375 10202 -1 - 174 hypothetical protein - none -
fig|6666666.67468.peg.242 CDS gi|344043553|gb|AFYA01000024.1| 10398 11759 3 + 1362 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67468.peg.243 CDS gi|344043553|gb|AFYA01000024.1| 11759 12589 2 + 831 putative rRNA methylase - none -
fig|6666666.67468.peg.244 CDS gi|344043553|gb|AFYA01000024.1| 13484 12612 -2 - 873 FIG00544583: hypothetical protein - none -
fig|6666666.67468.peg.245 CDS gi|344043553|gb|AFYA01000024.1| 14429 13494 -2 - 936 FIG00545091: hypothetical protein - none -
fig|6666666.67468.peg.246 CDS gi|344043553|gb|AFYA01000024.1| 15657 14527 -3 - 1131 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67468.peg.247 CDS gi|344043553|gb|AFYA01000024.1| 16383 17696 3 + 1314 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67468.peg.248 CDS gi|344043553|gb|AFYA01000024.1| 17821 18177 1 + 357 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67468.peg.249 CDS gi|344043553|gb|AFYA01000024.1| 19638 18184 -3 - 1455 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.250 CDS gi|344043553|gb|AFYA01000024.1| 20192 20533 2 + 342 FIG00544151: hypothetical protein - none -
fig|6666666.67468.peg.251 CDS gi|344043553|gb|AFYA01000024.1| 20540 22195 2 + 1656 putative transport protein - none -
fig|6666666.67468.peg.252 CDS gi|344043553|gb|AFYA01000024.1| 22313 23089 2 + 777 FIG00544899: hypothetical protein - none -
fig|6666666.67468.peg.253 CDS gi|344043553|gb|AFYA01000024.1| 23933 23091 -2 - 843 Putative secreted protein - none -
fig|6666666.67468.peg.254 CDS gi|344043553|gb|AFYA01000024.1| 24217 33126 1 + 8910 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67468.peg.255 CDS gi|344043553|gb|AFYA01000024.1| 33248 33739 2 + 492 hypothetical protein - none -
fig|6666666.67468.peg.256 CDS gi|344043553|gb|AFYA01000024.1| 35186 34137 -2 - 1050 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67468.peg.257 CDS gi|344043553|gb|AFYA01000024.1| 35967 36236 3 + 270 FIG00544401: hypothetical protein - none -
fig|6666666.67468.peg.258 CDS gi|344043553|gb|AFYA01000024.1| 36508 36269 -1 - 240 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.67468.peg.259 CDS gi|344043553|gb|AFYA01000024.1| 36979 36521 -1 - 459 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67468.peg.260 CDS gi|344043553|gb|AFYA01000024.1| 37776 36976 -3 - 801 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.67468.peg.261 CDS gi|344043553|gb|AFYA01000024.1| 38553 37795 -3 - 759 inositol monophosphatase family protein - none -
fig|6666666.67468.peg.262 CDS gi|344043553|gb|AFYA01000024.1| 38588 43150 2 + 4563 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67468.peg.263 CDS gi|344043553|gb|AFYA01000024.1| 43160 43930 2 + 771 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67468.peg.264 CDS gi|344043553|gb|AFYA01000024.1| 43934 44344 2 + 411 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67468.peg.265 CDS gi|344043553|gb|AFYA01000024.1| 44891 44334 -2 - 558 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67468.peg.266 CDS gi|344043553|gb|AFYA01000024.1| 45092 44934 -2 - 159 FIG00545646: hypothetical protein - none -
fig|6666666.67468.peg.267 CDS gi|344043553|gb|AFYA01000024.1| 46277 45102 -2 - 1176 putative transport protein - none -
fig|6666666.67468.peg.268 CDS gi|344043553|gb|AFYA01000024.1| 47924 46302 -2 - 1623 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.269 CDS gi|344043553|gb|AFYA01000024.1| 49241 48063 -2 - 1179 FIG00546706: hypothetical protein - none -
fig|6666666.67468.peg.270 CDS gi|344043553|gb|AFYA01000024.1| 49702 49397 -1 - 306 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67468.peg.271 CDS gi|344043553|gb|AFYA01000024.1| 49771 52062 1 + 2292 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67468.peg.272 CDS gi|344043553|gb|AFYA01000024.1| 54256 52019 -1 - 2238 FIG00545210: hypothetical protein - none -
fig|6666666.67468.peg.273 CDS gi|344043553|gb|AFYA01000024.1| 54921 54253 -3 - 669 ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.274 CDS gi|344043553|gb|AFYA01000024.1| 55431 54922 -3 - 510 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67468.peg.275 CDS gi|344043553|gb|AFYA01000024.1| 56241 55528 -3 - 714 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67468.peg.276 CDS gi|344043553|gb|AFYA01000024.1| 56594 56385 -2 - 210 hypothetical protein - none -
fig|6666666.67468.peg.277 CDS gi|344043553|gb|AFYA01000024.1| 56597 57916 2 + 1320 FIG021574: Possible membrane protein related to de Novo purine biosynthesis A hypothetical coupled to de Novo Purine Biosynthesis
fig|6666666.67468.peg.278 CDS gi|344043553|gb|AFYA01000024.1| 57957 58520 3 + 564 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67468.peg.279 CDS gi|344043553|gb|AFYA01000024.1| 58528 60090 1 + 1563 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67468.peg.280 CDS gi|344043553|gb|AFYA01000024.1| 60155 60976 2 + 822 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.67468.peg.281 CDS gi|344043553|gb|AFYA01000024.1| 61622 60954 -2 - 669 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.282 CDS gi|344043553|gb|AFYA01000024.1| 62550 61696 -3 - 855 No significant database matches - none -
fig|6666666.67468.peg.283 CDS gi|344043553|gb|AFYA01000024.1| 62956 62705 -1 - 252 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67468.peg.284 CDS gi|344043553|gb|AFYA01000024.1| 63276 62971 -3 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67468.peg.285 CDS gi|344043553|gb|AFYA01000024.1| 63444 63280 -3 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67468.peg.286 CDS gi|344043553|gb|AFYA01000024.1| 63587 63447 -2 - 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67468.peg.287 CDS gi|344043553|gb|AFYA01000024.1| 65484 63871 -3 - 1614 Sulfate permease Cysteine Biosynthesis
fig|6666666.67468.peg.288 CDS gi|344043553|gb|AFYA01000024.1| 65791 65477 -1 - 315 putative transcription regulator - none -
fig|6666666.67468.peg.289 CDS gi|344043553|gb|AFYA01000024.1| 66023 66289 2 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67468.peg.290 CDS gi|344043553|gb|AFYA01000024.1| 66301 66474 1 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67468.peg.291 CDS gi|344043553|gb|AFYA01000024.1| 66597 67364 3 + 768 two-component system, response regulator - none -
fig|6666666.67468.peg.292 CDS gi|344043553|gb|AFYA01000024.1| 67433 68800 2 + 1368 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.67468.peg.293 CDS gi|344043553|gb|AFYA01000024.1| 68875 70200 1 + 1326 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67468.peg.294 CDS gi|344043553|gb|AFYA01000024.1| 70255 70842 1 + 588 molybdopterin biosynthesis enzyme - none -
fig|6666666.67468.peg.295 CDS gi|344043553|gb|AFYA01000024.1| 71523 71116 -3 - 408 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67468.peg.296 CDS gi|344043553|gb|AFYA01000024.1| 72159 71605 -3 - 555 FIG00546567: hypothetical protein - none -
fig|6666666.67468.peg.297 CDS gi|344043553|gb|AFYA01000024.1| 72850 72278 -1 - 573 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67468.peg.298 CDS gi|344043553|gb|AFYA01000024.1| 72923 73870 2 + 948 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67468.peg.299 CDS gi|344043553|gb|AFYA01000024.1| 73899 75158 3 + 1260 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67468.peg.300 CDS gi|344043553|gb|AFYA01000024.1| 75307 75825 1 + 519 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.67468.peg.301 CDS gi|344043553|gb|AFYA01000024.1| 75939 76952 3 + 1014 FIG00544639: hypothetical protein - none -
fig|6666666.67468.peg.302 CDS gi|344043553|gb|AFYA01000024.1| 76975 78177 1 + 1203 putative transport protein - none -
fig|6666666.67468.peg.303 CDS gi|344043553|gb|AFYA01000024.1| 78249 78641 3 + 393 FIG00544115: hypothetical protein - none -
fig|6666666.67468.peg.304 CDS gi|344043553|gb|AFYA01000024.1| 78619 79305 1 + 687 hypothetical membrane protein - none -
fig|6666666.67468.peg.305 CDS gi|344043553|gb|AFYA01000024.1| 79316 80476 2 + 1161 putative amylase - none -
fig|6666666.67468.peg.306 CDS gi|344043553|gb|AFYA01000024.1| 80785 80651 -1 - 135 hypothetical protein - none -
fig|6666666.67468.peg.307 CDS gi|344043553|gb|AFYA01000024.1| 82488 80926 -3 - 1563 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67468.peg.308 CDS gi|344043553|gb|AFYA01000024.1| 82536 83384 3 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67468.peg.309 CDS gi|344043553|gb|AFYA01000024.1| 83544 85331 3 + 1788 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67468.peg.310 CDS gi|344043553|gb|AFYA01000024.1| 85387 87219 1 + 1833 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67468.peg.311 CDS gi|344043553|gb|AFYA01000024.1| 87337 89388 1 + 2052 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.67468.peg.312 CDS gi|344043553|gb|AFYA01000024.1| 90006 89371 -3 - 636 FIG00548678: hypothetical protein - none -
fig|6666666.67468.peg.313 CDS gi|344043553|gb|AFYA01000024.1| 90028 90861 1 + 834 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67468.peg.314 CDS gi|344043553|gb|AFYA01000024.1| 91032 92156 3 + 1125 Cell wall-binding protein - none -
fig|6666666.67468.peg.315 CDS gi|344043553|gb|AFYA01000024.1| 92193 93074 3 + 882 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.67468.peg.316 CDS gi|344043553|gb|AFYA01000024.1| 93071 94009 2 + 939 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67468.peg.317 CDS gi|344043553|gb|AFYA01000024.1| 94047 95879 3 + 1833 ABC transporter, ATP-binding protein - none -
fig|6666666.67468.peg.318 CDS gi|344043553|gb|AFYA01000024.1| 95883 96677 3 + 795 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67468.peg.319 CDS gi|344043553|gb|AFYA01000024.1| 97156 96674 -1 - 483 FIG00546761: hypothetical protein - none -
fig|6666666.67468.peg.320 CDS gi|344043553|gb|AFYA01000024.1| 97245 97568 3 + 324 FIG00544339: hypothetical protein - none -
fig|6666666.67468.peg.321 CDS gi|344043553|gb|AFYA01000024.1| 97634 97957 2 + 324 FIG00546704: hypothetical protein - none -
fig|6666666.67468.peg.322 CDS gi|344043553|gb|AFYA01000024.1| 98080 99042 1 + 963 FIG00545275: hypothetical protein - none -
fig|6666666.67468.peg.323 CDS gi|344043553|gb|AFYA01000024.1| 100249 99455 -1 - 795 FIG00544241: hypothetical protein - none -
fig|6666666.67468.peg.324 CDS gi|344043553|gb|AFYA01000024.1| 100395 101372 3 + 978 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67468.peg.325 CDS gi|344043553|gb|AFYA01000024.1| 101424 102179 3 + 756 FIG00544902: hypothetical protein - none -
fig|6666666.67468.peg.326 CDS gi|344043553|gb|AFYA01000024.1| 103372 102176 -1 - 1197 FIG00544244: hypothetical protein - none -
fig|6666666.67468.peg.327 CDS gi|344043553|gb|AFYA01000024.1| 103501 104952 1 + 1452 FIG00548782: hypothetical protein - none -
fig|6666666.67468.peg.328 CDS gi|344043553|gb|AFYA01000024.1| 105519 105013 -3 - 507 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.329 CDS gi|344043553|gb|AFYA01000024.1| 107956 105581 -1 - 2376 FIG00548670: hypothetical protein - none -
fig|6666666.67468.peg.330 CDS gi|344043553|gb|AFYA01000024.1| 108203 108709 2 + 507 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.67468.peg.331 CDS gi|344043553|gb|AFYA01000024.1| 108847 109506 1 + 660 FIG00545707: hypothetical protein - none -
fig|6666666.67468.peg.332 CDS gi|344043553|gb|AFYA01000024.1| 110022 109537 -3 - 486 hypothetical protein - none -
fig|6666666.67468.peg.333 CDS gi|344043658|gb|AFYA01000023.1| 1051 296 -1 - 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.67468.peg.334 CDS gi|344043658|gb|AFYA01000023.1| 2163 1048 -3 - 1116 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.67468.peg.335 CDS gi|344043658|gb|AFYA01000023.1| 3157 2156 -1 - 1002 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.67468.peg.336 CDS gi|344043658|gb|AFYA01000023.1| 4424 3408 -2 - 1017 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.67468.peg.337 CDS gi|344043658|gb|AFYA01000023.1| 4776 5366 3 + 591 FIG00545949: hypothetical protein - none -
fig|6666666.67468.peg.338 CDS gi|344043658|gb|AFYA01000023.1| 5532 6452 3 + 921 iron compound ABC transporter, periplasmic iron-compound-binding protein - none -
fig|6666666.67468.peg.340 CDS gi|344043658|gb|AFYA01000023.1| 8913 7849 -3 - 1065 DNA-cytosine methyltransferase (EC 2.1.1.37) DNA repair, bacterial
fig|6666666.67468.peg.341 CDS gi|344043658|gb|AFYA01000023.1| 8936 9103 2 + 168 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.67468.peg.342 CDS gi|344043658|gb|AFYA01000023.1| 9248 9436 2 + 189 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.67468.peg.343 CDS gi|344043658|gb|AFYA01000023.1| 9827 9678 -2 - 150 hypothetical protein - none -
fig|6666666.67468.peg.344 CDS gi|344043658|gb|AFYA01000023.1| 9955 11136 1 + 1182 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.345 CDS gi|344043658|gb|AFYA01000023.1| 11133 12395 3 + 1263 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.346 CDS gi|344043658|gb|AFYA01000023.1| 12392 13969 2 + 1578 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.347 CDS gi|344043658|gb|AFYA01000023.1| 13969 14865 1 + 897 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.348 CDS gi|344043658|gb|AFYA01000023.1| 15362 15042 -2 - 321 hypothetical protein - none -
fig|6666666.67468.peg.349 CDS gi|344043658|gb|AFYA01000023.1| 15703 16020 1 + 318 blasticidin S deaminase, putative - none -
fig|6666666.67468.peg.350 CDS gi|344043658|gb|AFYA01000023.1| 16121 15996 -2 - 126 hypothetical protein - none -
fig|6666666.67468.peg.351 CDS gi|344043658|gb|AFYA01000023.1| 16505 16678 2 + 174 hypothetical protein - none -
fig|6666666.67468.peg.352 CDS gi|344043658|gb|AFYA01000023.1| 17158 16931 -1 - 228 hypothetical protein - none -
fig|6666666.67468.peg.353 CDS gi|344043658|gb|AFYA01000023.1| 18296 17487 -2 - 810 Phage antirepressor protein #of cryptic prophage CP-933M - none -
fig|6666666.67468.peg.354 CDS gi|344043658|gb|AFYA01000023.1| 18734 18856 2 + 123 hypothetical protein - none -
fig|6666666.67468.peg.355 CDS gi|344043658|gb|AFYA01000023.1| 18968 19738 2 + 771 hypothetical protein - none -
fig|6666666.67468.peg.356 CDS gi|344043658|gb|AFYA01000023.1| 20484 21101 3 + 618 hypothetical protein - none -
fig|6666666.67468.peg.357 CDS gi|344043658|gb|AFYA01000023.1| 21383 21246 -2 - 138 hypothetical protein - none -
fig|6666666.67468.peg.358 CDS gi|344043658|gb|AFYA01000023.1| 23052 22003 -3 - 1050 hypothetical protein - none -
fig|6666666.67468.peg.359 CDS gi|344043658|gb|AFYA01000023.1| 23005 23250 1 + 246 hypothetical protein - none -
fig|6666666.67468.peg.360 CDS gi|344043658|gb|AFYA01000023.1| 26475 23287 -3 - 3189 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67468.peg.361 CDS gi|344043658|gb|AFYA01000023.1| 27758 26472 -2 - 1287 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67468.peg.362 CDS gi|344043658|gb|AFYA01000023.1| 29719 27755 -1 - 1965 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67468.peg.363 CDS gi|344043658|gb|AFYA01000023.1| 32072 30681 -2 - 1392 DNA primase, phage associated - none -
fig|6666666.67468.peg.364 CDS gi|344043658|gb|AFYA01000023.1| 32737 32072 -1 - 666 hypothetical protein - none -
fig|6666666.67468.peg.365 CDS gi|344043658|gb|AFYA01000023.1| 33305 32934 -2 - 372 hypothetical protein - none -
fig|6666666.67468.peg.366 CDS gi|344043658|gb|AFYA01000023.1| 34180 34329 1 + 150 hypothetical protein - none -
fig|6666666.67468.peg.367 CDS gi|344043658|gb|AFYA01000023.1| 35666 34407 -2 - 1260 putative integrase - none -
fig|6666666.67468.peg.368 CDS gi|344043658|gb|AFYA01000023.1| 36654 36301 -3 - 354 FIG016027: protein of unknown function YeaO - none -
fig|6666666.67468.peg.369 CDS gi|344043658|gb|AFYA01000023.1| 37149 36655 -3 - 495 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67468.peg.370 CDS gi|344043658|gb|AFYA01000023.1| 38088 37186 -3 - 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67468.peg.371 CDS gi|344043658|gb|AFYA01000023.1| 38791 38102 -1 - 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67468.peg.372 CDS gi|344043658|gb|AFYA01000023.1| 40029 38923 -3 - 1107 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67468.peg.373 CDS gi|344043658|gb|AFYA01000023.1| 40108 40983 1 + 876 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67468.peg.374 CDS gi|344043658|gb|AFYA01000023.1| 40990 41772 1 + 783 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67468.peg.375 CDS gi|344043658|gb|AFYA01000023.1| 42134 42634 2 + 501 hypothetical protein - none -
fig|6666666.67468.peg.376 CDS gi|344043658|gb|AFYA01000023.1| 42731 42901 2 + 171 hypothetical protein - none -
fig|6666666.67468.peg.377 CDS gi|344043658|gb|AFYA01000023.1| 44410 43979 -1 - 432 FIG00544175: hypothetical protein - none -
fig|6666666.67468.peg.378 CDS gi|344043658|gb|AFYA01000023.1| 45032 44673 -2 - 360 hypothetical protein - none -
fig|6666666.67468.peg.379 CDS gi|344043658|gb|AFYA01000023.1| 46312 45314 -1 - 999 FIG00545324: hypothetical protein - none -
fig|6666666.67468.peg.380 CDS gi|344043658|gb|AFYA01000023.1| 47979 47377 -3 - 603 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67468.peg.381 CDS gi|344043658|gb|AFYA01000023.1| 48875 47976 -2 - 900 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67468.peg.382 CDS gi|344043658|gb|AFYA01000023.1| 48965 50326 2 + 1362 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67468.peg.383 CDS gi|344043658|gb|AFYA01000023.1| 53334 50377 -3 - 2958 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67468.peg.384 CDS gi|344043658|gb|AFYA01000023.1| 53433 53957 3 + 525 FIG129854: hypothetical protein - none -
fig|6666666.67468.peg.385 CDS gi|344043658|gb|AFYA01000023.1| 54034 54711 1 + 678 FIG00544133: hypothetical protein - none -
fig|6666666.67468.peg.386 CDS gi|344043658|gb|AFYA01000023.1| 55760 54708 -2 - 1053 Lon-like protease with PDZ domain CBSS-269801.1.peg.1715
fig|6666666.67468.peg.387 CDS gi|344043658|gb|AFYA01000023.1| 55846 57273 1 + 1428 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67468.peg.388 CDS gi|344043658|gb|AFYA01000023.1| 57766 57278 -1 - 489 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67468.peg.389 CDS gi|344043658|gb|AFYA01000023.1| 57863 58663 2 + 801 FIG00544187: hypothetical protein - none -
fig|6666666.67468.peg.390 CDS gi|344043658|gb|AFYA01000023.1| 60696 58660 -3 - 2037 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67468.peg.391 CDS gi|344043658|gb|AFYA01000023.1| 61427 60711 -2 - 717 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67468.peg.392 CDS gi|344043658|gb|AFYA01000023.1| 62485 61424 -1 - 1062 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67468.peg.393 CDS gi|344043658|gb|AFYA01000023.1| 65737 62525 -1 - 3213 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67468.peg.394 CDS gi|344043658|gb|AFYA01000023.1| 68780 65730 -2 - 3051 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67468.peg.395 CDS gi|344043658|gb|AFYA01000023.1| 69545 68784 -2 - 762 FIG00544868: hypothetical protein - none -
fig|6666666.67468.peg.396 CDS gi|344043658|gb|AFYA01000023.1| 70401 69553 -3 - 849 FIG00544386: hypothetical protein - none -
fig|6666666.67468.peg.397 CDS gi|344043658|gb|AFYA01000023.1| 70664 70437 -2 - 228 FIG00543928: hypothetical protein - none -
fig|6666666.67468.peg.398 CDS gi|344043658|gb|AFYA01000023.1| 70781 72007 2 + 1227 putative ATP-dependent RNA helicase - none -
fig|6666666.67468.peg.399 CDS gi|344043658|gb|AFYA01000023.1| 72011 73213 2 + 1203 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67468.peg.400 CDS gi|344043658|gb|AFYA01000023.1| 73611 73210 -3 - 402 FIG00543921: hypothetical protein - none -
fig|6666666.67468.peg.401 CDS gi|344043658|gb|AFYA01000023.1| 74158 74418 1 + 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67468.peg.402 CDS gi|344043658|gb|AFYA01000023.1| 75542 74922 -2 - 621 putative RNA polymerase sigma factor - none -
fig|6666666.67468.peg.403 CDS gi|344043658|gb|AFYA01000023.1| 75710 76558 2 + 849 FIG00544692: hypothetical protein - none -
fig|6666666.67468.peg.404 CDS gi|344043658|gb|AFYA01000023.1| 77510 76821 -2 - 690 FIG00543821: hypothetical protein - none -
fig|6666666.67468.peg.405 CDS gi|344043658|gb|AFYA01000023.1| 77473 78765 1 + 1293 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.406 CDS gi|344043658|gb|AFYA01000023.1| 78857 79747 2 + 891 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.67468.peg.407 CDS gi|344043658|gb|AFYA01000023.1| 80255 79749 -2 - 507 FIG00544397: hypothetical protein - none -
fig|6666666.67468.peg.408 CDS gi|344043658|gb|AFYA01000023.1| 80668 80258 -1 - 411 FIG00996758: hypothetical protein - none -
fig|6666666.67468.peg.409 CDS gi|344043658|gb|AFYA01000023.1| 83702 81165 -2 - 2538 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67468.peg.410 CDS gi|344043658|gb|AFYA01000023.1| 84506 83841 -2 - 666 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67468.peg.411 CDS gi|344043658|gb|AFYA01000023.1| 84799 84650 -1 - 150 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67468.peg.412 CDS gi|344043658|gb|AFYA01000023.1| 86769 85240 -3 - 1530 LpqB - none -
fig|6666666.67468.peg.413 CDS gi|344043658|gb|AFYA01000023.1| 88442 86943 -2 - 1500 Putative two component system sensor kinase - none -
fig|6666666.67468.peg.414 CDS gi|344043658|gb|AFYA01000023.1| 89222 88542 -2 - 681 DNA-binding response regulator mtrA - none -
fig|6666666.67468.peg.415 CDS gi|344043658|gb|AFYA01000023.1| 89858 89247 -2 - 612 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.67468.peg.416 CDS gi|344043658|gb|AFYA01000023.1| 91294 89858 -1 - 1437 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67468.peg.417 CDS gi|344043658|gb|AFYA01000023.1| 91758 91405 -3 - 354 FIG00544092: hypothetical protein - none -
fig|6666666.67468.peg.418 CDS gi|344043658|gb|AFYA01000023.1| 92002 92778 1 + 777 FIG00544185: hypothetical protein - none -
fig|6666666.67468.peg.419 CDS gi|344043658|gb|AFYA01000023.1| 94375 93191 -1 - 1185 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67468.peg.420 CDS gi|344043658|gb|AFYA01000023.1| 95419 94376 -1 - 1044 FIG00545059: hypothetical protein - none -
fig|6666666.67468.peg.421 CDS gi|344043658|gb|AFYA01000023.1| 96834 95458 -3 - 1377 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67468.peg.422 CDS gi|344043658|gb|AFYA01000023.1| 97117 96914 -1 - 204 FIG00543823: hypothetical protein - none -
fig|6666666.67468.peg.423 CDS gi|344043658|gb|AFYA01000023.1| 97455 97859 3 + 405 FIG00544777: hypothetical protein - none -
fig|6666666.67468.peg.424 CDS gi|344043658|gb|AFYA01000023.1| 98280 97966 -3 - 315 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67468.peg.425 CDS gi|344043658|gb|AFYA01000023.1| 99758 98670 -2 - 1089 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67468.peg.426 CDS gi|344043658|gb|AFYA01000023.1| 100830 99931 -3 - 900 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67468.peg.427 CDS gi|344043658|gb|AFYA01000023.1| 101154 102713 3 + 1560 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67468.peg.428 CDS gi|344043658|gb|AFYA01000023.1| 102810 103469 3 + 660 FIG00545912: hypothetical protein - none -
fig|6666666.67468.peg.429 CDS gi|344043658|gb|AFYA01000023.1| 103739 103858 2 + 120 hypothetical protein - none -
fig|6666666.67468.peg.430 CDS gi|344043658|gb|AFYA01000023.1| 104232 105230 3 + 999 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.431 CDS gi|344043658|gb|AFYA01000023.1| 105367 106641 1 + 1275 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.432 CDS gi|344043658|gb|AFYA01000023.1| 106775 107230 2 + 456 FIG00544213: hypothetical protein - none -
fig|6666666.67468.peg.433 CDS gi|344043658|gb|AFYA01000023.1| 107342 108376 2 + 1035 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.434 CDS gi|344043658|gb|AFYA01000023.1| 108373 109209 1 + 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.435 CDS gi|344043658|gb|AFYA01000023.1| 109221 109445 3 + 225 FIG00548589: hypothetical protein - none -
fig|6666666.67468.peg.436 CDS gi|344043658|gb|AFYA01000023.1| 109849 109442 -1 - 408 FIG00547220: hypothetical protein - none -
fig|6666666.67468.peg.437 CDS gi|344043658|gb|AFYA01000023.1| 109892 110449 2 + 558 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67468.peg.438 CDS gi|344043658|gb|AFYA01000023.1| 110609 111100 2 + 492 hypothetical protein - none -
fig|6666666.67468.peg.439 CDS gi|344043658|gb|AFYA01000023.1| 111771 111595 -3 - 177 hypothetical protein - none -
fig|6666666.67468.peg.440 CDS gi|344043658|gb|AFYA01000023.1| 112364 113119 2 + 756 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.441 CDS gi|344043658|gb|AFYA01000023.1| 113119 114435 1 + 1317 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) - none -
fig|6666666.67468.peg.442 CDS gi|344043658|gb|AFYA01000023.1| 115235 114441 -2 - 795 TesB-like acyl-CoA thioesterase 5 Acyl-CoA thioesterase II
fig|6666666.67468.peg.443 CDS gi|344043658|gb|AFYA01000023.1| 115749 115294 -3 - 456 FIG00546729: hypothetical protein - none -
fig|6666666.67468.peg.444 CDS gi|344043658|gb|AFYA01000023.1| 116246 115749 -2 - 498 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67468.peg.445 CDS gi|344043658|gb|AFYA01000023.1| 116664 116305 -3 - 360 FIG00547820: hypothetical protein - none -
fig|6666666.67468.peg.446 CDS gi|344043658|gb|AFYA01000023.1| 118576 116702 -1 - 1875 Kup system potassium uptake protein Potassium homeostasis
fig|6666666.67468.peg.447 CDS gi|344043658|gb|AFYA01000023.1| 119827 118628 -1 - 1200 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67468.peg.448 CDS gi|344043658|gb|AFYA01000023.1| 120336 119848 -3 - 489 FIG00545249: hypothetical protein - none -
fig|6666666.67468.peg.449 CDS gi|344043658|gb|AFYA01000023.1| 121212 120346 -3 - 867 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67468.peg.450 CDS gi|344043658|gb|AFYA01000023.1| 121324 122955 1 + 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67468.peg.451 CDS gi|344043658|gb|AFYA01000023.1| 123284 124897 2 + 1614 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67468.peg.452 CDS gi|344043658|gb|AFYA01000023.1| 124921 125169 1 + 249 FIG00544173: hypothetical protein - none -
fig|6666666.67468.peg.453 CDS gi|344043658|gb|AFYA01000023.1| 125174 125767 2 + 594 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67468.peg.454 CDS gi|344043658|gb|AFYA01000023.1| 128230 126074 -1 - 2157 O-antigen acetylase - none -
fig|6666666.67468.peg.455 CDS gi|344043658|gb|AFYA01000023.1| 128298 128714 3 + 417 FIG00547406: hypothetical protein - none -
fig|6666666.67468.peg.456 CDS gi|344043658|gb|AFYA01000023.1| 129859 128792 -1 - 1068 FIG00548218: hypothetical protein - none -
fig|6666666.67468.peg.457 CDS gi|344043658|gb|AFYA01000023.1| 129962 130090 2 + 129 hypothetical protein - none -
fig|6666666.67468.peg.458 CDS gi|344043658|gb|AFYA01000023.1| 130187 131077 2 + 891 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67468.peg.459 CDS gi|344043658|gb|AFYA01000023.1| 131285 133060 2 + 1776 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.460 CDS gi|344043658|gb|AFYA01000023.1| 133465 133283 -1 - 183 FIG00549822: hypothetical protein - none -
fig|6666666.67468.peg.461 CDS gi|344043658|gb|AFYA01000023.1| 133627 134952 1 + 1326 Transcriptional regulator, XRE family - none -
fig|6666666.67468.peg.462 CDS gi|344043658|gb|AFYA01000023.1| 134985 135353 3 + 369 FIG00547727: hypothetical protein - none -
fig|6666666.67468.peg.463 CDS gi|344043658|gb|AFYA01000023.1| 136495 135350 -1 - 1146 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67468.peg.464 CDS gi|344043658|gb|AFYA01000023.1| 137405 136488 -2 - 918 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67468.peg.465 CDS gi|344043658|gb|AFYA01000023.1| 138898 137402 -1 - 1497 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67468.peg.466 CDS gi|344043658|gb|AFYA01000023.1| 139912 138986 -1 - 927 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.67468.peg.467 CDS gi|344043658|gb|AFYA01000023.1| 140031 141119 3 + 1089 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis);
Zinc regulated enzymes
fig|6666666.67468.peg.468 CDS gi|344043658|gb|AFYA01000023.1| 142794 141925 -3 - 870 COG3118: Thioredoxin domain-containing protein - none -
fig|6666666.67468.peg.469 CDS gi|344043658|gb|AFYA01000023.1| 146425 143003 -1 - 3423 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.470 CDS gi|344043658|gb|AFYA01000023.1| 148231 146822 -1 - 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.67468.peg.471 CDS gi|344043658|gb|AFYA01000023.1| 149555 148371 -2 - 1185 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67468.peg.472 CDS gi|344043658|gb|AFYA01000023.1| 149663 151255 2 + 1593 putative phospho-sugar mutase - none -
fig|6666666.67468.peg.473 CDS gi|344043658|gb|AFYA01000023.1| 151638 151252 -3 - 387 predicted transcriptional regulator - none -
fig|6666666.67468.peg.474 CDS gi|344043658|gb|AFYA01000023.1| 152355 151720 -3 - 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67468.peg.475 CDS gi|344043658|gb|AFYA01000023.1| 152492 152367 -2 - 126 hypothetical protein - none -
fig|6666666.67468.peg.476 CDS gi|344043658|gb|AFYA01000023.1| 152466 152717 3 + 252 FIG00546981: hypothetical protein - none -
fig|6666666.67468.peg.477 CDS gi|344043658|gb|AFYA01000023.1| 152714 153574 2 + 861 FIG00544549: hypothetical protein - none -
fig|6666666.67468.peg.478 CDS gi|344043658|gb|AFYA01000023.1| 153641 154870 2 + 1230 FIG026501: hypothetical protein - none -
fig|6666666.67468.peg.479 CDS gi|344043658|gb|AFYA01000023.1| 155252 156562 2 + 1311 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.480 CDS gi|344043658|gb|AFYA01000023.1| 157452 156559 -3 - 894 FIG00545198: hypothetical protein - none -
fig|6666666.67468.peg.481 CDS gi|344043658|gb|AFYA01000023.1| 158596 157511 -1 - 1086 putative membrane protein - none -
fig|6666666.67468.peg.482 CDS gi|344043658|gb|AFYA01000023.1| 159742 158705 -1 - 1038 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67468.peg.483 CDS gi|344043658|gb|AFYA01000023.1| 159902 160921 2 + 1020 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.484 CDS gi|344043658|gb|AFYA01000023.1| 160928 161710 2 + 783 ABC-type transporter, ATPase component - none -
fig|6666666.67468.peg.485 CDS gi|344043658|gb|AFYA01000023.1| 161734 162711 1 + 978 FIG00548792: hypothetical protein - none -
fig|6666666.67468.peg.486 CDS gi|344043818|gb|AFYA01000022.1| 206 1060 2 + 855 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.487 CDS gi|344043818|gb|AFYA01000022.1| 1060 3621 1 + 2562 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.488 CDS gi|344043818|gb|AFYA01000022.1| 3965 5353 2 + 1389 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.67468.peg.489 CDS gi|344043818|gb|AFYA01000022.1| 5448 6164 3 + 717 hypothetical protein - none -
fig|6666666.67468.peg.490 CDS gi|344043818|gb|AFYA01000022.1| 6955 6161 -1 - 795 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase CBSS-279010.5.peg.587
fig|6666666.67468.peg.491 CDS gi|344043818|gb|AFYA01000022.1| 7291 6965 -1 - 327 hypothetical membrane protein - none -
fig|6666666.67468.peg.492 CDS gi|344043818|gb|AFYA01000022.1| 7578 7288 -3 - 291 camphor resistance protein CrcB - none -
fig|6666666.67468.peg.493 CDS gi|344043818|gb|AFYA01000022.1| 7678 9342 1 + 1665 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.67468.peg.494 CDS gi|344043818|gb|AFYA01000022.1| 9488 10282 2 + 795 FIG00544592: hypothetical protein - none -
fig|6666666.67468.peg.495 CDS gi|344043818|gb|AFYA01000022.1| 11208 12215 3 + 1008 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.496 CDS gi|344043818|gb|AFYA01000022.1| 12297 12710 3 + 414 FIG00543983: hypothetical protein - none -
fig|6666666.67468.peg.497 CDS gi|344043818|gb|AFYA01000022.1| 12713 13462 2 + 750 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.67468.peg.498 CDS gi|344043818|gb|AFYA01000022.1| 14292 13459 -3 - 834 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67468.peg.499 CDS gi|344043818|gb|AFYA01000022.1| 14496 14618 3 + 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67468.peg.500 CDS gi|344043818|gb|AFYA01000022.1| 14739 14885 3 + 147 hypothetical protein - none -
fig|6666666.67468.peg.501 CDS gi|344043818|gb|AFYA01000022.1| 15189 15422 3 + 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67468.peg.502 CDS gi|344043818|gb|AFYA01000022.1| 15720 16157 3 + 438 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67468.peg.503 CDS gi|344043818|gb|AFYA01000022.1| 16258 18363 1 + 2106 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67468.peg.504 CDS gi|344043818|gb|AFYA01000022.1| 18645 19874 3 + 1230 Sodium/calcium exchanger family protein - none -
fig|6666666.67468.peg.505 CDS gi|344043818|gb|AFYA01000022.1| 19887 20549 3 + 663 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67468.peg.506 CDS gi|344043818|gb|AFYA01000022.1| 21274 20546 -1 - 729 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.507 CDS gi|344043818|gb|AFYA01000022.1| 21984 21496 -3 - 489 Putative bacterioferritin - none -
fig|6666666.67468.peg.508 CDS gi|344043818|gb|AFYA01000022.1| 22449 23453 3 + 1005 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67468.peg.509 CDS gi|344043818|gb|AFYA01000022.1| 24067 25716 1 + 1650 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67468.peg.510 CDS gi|344043818|gb|AFYA01000022.1| 25972 27273 1 + 1302 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67468.peg.511 CDS gi|344043818|gb|AFYA01000022.1| 27266 27991 2 + 726 FIG00546117: hypothetical protein - none -
fig|6666666.67468.peg.512 CDS gi|344043818|gb|AFYA01000022.1| 28067 28960 2 + 894 PROBABLE PROLINE AND GLYCINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67468.peg.513 CDS gi|344043818|gb|AFYA01000022.1| 30967 28970 -1 - 1998 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67468.peg.514 CDS gi|344043818|gb|AFYA01000022.1| 31360 31214 -1 - 147 hypothetical protein - none -
fig|6666666.67468.peg.515 CDS gi|344043818|gb|AFYA01000022.1| 32767 31427 -1 - 1341 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67468.peg.516 CDS gi|344043818|gb|AFYA01000022.1| 33315 32764 -3 - 552 FIG00545098: hypothetical protein - none -
fig|6666666.67468.peg.517 CDS gi|344043818|gb|AFYA01000022.1| 33573 33947 3 + 375 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67468.peg.518 CDS gi|344043818|gb|AFYA01000022.1| 33960 34499 3 + 540 Transcriptional regulatory protein - none -
fig|6666666.67468.peg.519 CDS gi|344043818|gb|AFYA01000022.1| 34499 35413 2 + 915 possible hydrolase - none -
fig|6666666.67468.peg.520 CDS gi|344043818|gb|AFYA01000022.1| 35410 36159 1 + 750 FIG00545125: hypothetical protein - none -
fig|6666666.67468.peg.521 CDS gi|344043818|gb|AFYA01000022.1| 36189 36683 3 + 495 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.522 CDS gi|344043818|gb|AFYA01000022.1| 37319 36693 -2 - 627 FIG00546464: hypothetical protein - none -
fig|6666666.67468.peg.523 CDS gi|344043818|gb|AFYA01000022.1| 37373 38224 2 + 852 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.524 CDS gi|344043818|gb|AFYA01000022.1| 38426 39094 2 + 669 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67468.peg.525 CDS gi|344043818|gb|AFYA01000022.1| 39194 40720 2 + 1527 FIG00544694: hypothetical protein - none -
fig|6666666.67468.peg.526 CDS gi|344043818|gb|AFYA01000022.1| 40872 41609 3 + 738 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67468.peg.527 CDS gi|344043818|gb|AFYA01000022.1| 41636 42256 2 + 621 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67468.peg.528 CDS gi|344043818|gb|AFYA01000022.1| 42686 42330 -2 - 357 FIG00543835: hypothetical protein - none -
fig|6666666.67468.peg.529 CDS gi|344043818|gb|AFYA01000022.1| 43231 42767 -1 - 465 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67468.peg.530 CDS gi|344043862|gb|AFYA01000021.1| 920 318 -2 - 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67468.peg.531 CDS gi|344043862|gb|AFYA01000021.1| 1166 1819 2 + 654 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67468.peg.532 CDS gi|344043862|gb|AFYA01000021.1| 1870 3093 1 + 1224 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.533 CDS gi|344043862|gb|AFYA01000021.1| 3101 3649 2 + 549 FIG00545070: hypothetical protein - none -
fig|6666666.67468.peg.534 CDS gi|344043862|gb|AFYA01000021.1| 5599 4475 -1 - 1125 FIG00547721: hypothetical protein - none -
fig|6666666.67468.peg.535 CDS gi|344043862|gb|AFYA01000021.1| 7168 5636 -1 - 1533 Aldehyde dehydrogenase B (EC 1.2.1.22) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.536 CDS gi|344043862|gb|AFYA01000021.1| 8582 7161 -2 - 1422 Uncharacterized protein Rv3292/MT3391 - none -
fig|6666666.67468.peg.537 CDS gi|344043862|gb|AFYA01000021.1| 9787 8597 -1 - 1191 Sarcosine oxidase beta subunit (EC 1.5.3.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Niacin-Choline transport and metabolism
fig|6666666.67468.peg.538 CDS gi|344043862|gb|AFYA01000021.1| 10633 9905 -1 - 729 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.539 CDS gi|344043862|gb|AFYA01000021.1| 10900 12477 1 + 1578 Na(+)-linked D-alanine glycine permease - none -
fig|6666666.67468.peg.540 CDS gi|344043862|gb|AFYA01000021.1| 12916 12533 -1 - 384 hypothetical protein - none -
fig|6666666.67468.peg.541 CDS gi|344043862|gb|AFYA01000021.1| 14288 13026 -2 - 1263 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.67468.peg.542 CDS gi|344043862|gb|AFYA01000021.1| 15624 14323 -3 - 1302 putative transport protein - none -
fig|6666666.67468.peg.543 CDS gi|344043862|gb|AFYA01000021.1| 15917 17023 2 + 1107 hypothetical protein - none -
fig|6666666.67468.peg.544 CDS gi|344043862|gb|AFYA01000021.1| 17862 17074 -3 - 789 FIG00547443: hypothetical protein - none -
fig|6666666.67468.peg.545 CDS gi|344043862|gb|AFYA01000021.1| 18558 17863 -3 - 696 Lactate-responsive regulator LldR in Actinobacteria, GntR family Lactate utilization
fig|6666666.67468.peg.546 CDS gi|344043862|gb|AFYA01000021.1| 19119 18574 -3 - 546 FIG00548635: hypothetical protein - none -
fig|6666666.67468.peg.547 CDS gi|344043862|gb|AFYA01000021.1| 19801 19163 -1 - 639 FIG00547651: hypothetical protein - none -
fig|6666666.67468.peg.548 CDS gi|344043862|gb|AFYA01000021.1| 21589 19811 -1 - 1779 Predicted membrane protein (DUF2319) - none -
fig|6666666.67468.peg.549 CDS gi|344043862|gb|AFYA01000021.1| 21818 22762 2 + 945 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate
fig|6666666.67468.peg.550 CDS gi|344043862|gb|AFYA01000021.1| 22888 24747 1 + 1860 Pyruvate kinase family protein - none -
fig|6666666.67468.peg.551 CDS gi|344043862|gb|AFYA01000021.1| 26772 25273 -3 - 1500 L-asparagine permease - none -
fig|6666666.67468.peg.552 CDS gi|344043862|gb|AFYA01000021.1| 28195 26786 -1 - 1410 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67468.peg.553 CDS gi|344043862|gb|AFYA01000021.1| 29163 28210 -3 - 954 Hypothetical protein of L-Asparaginase type 2-like superfamily - none -
fig|6666666.67468.peg.554 CDS gi|344043862|gb|AFYA01000021.1| 29876 29160 -2 - 717 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.555 CDS gi|344043862|gb|AFYA01000021.1| 31384 29993 -1 - 1392 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.67468.peg.556 CDS gi|344043862|gb|AFYA01000021.1| 31785 32546 3 + 762 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67468.peg.557 CDS gi|344043862|gb|AFYA01000021.1| 32524 33444 1 + 921 hypothetical protein - none -
fig|6666666.67468.peg.558 CDS gi|344043862|gb|AFYA01000021.1| 33771 33628 -3 - 144 hypothetical protein - none -
fig|6666666.67468.peg.559 CDS gi|344043862|gb|AFYA01000021.1| 33847 35292 1 + 1446 Mobile element protein - none -
fig|6666666.67468.peg.560 CDS gi|344043862|gb|AFYA01000021.1| 36884 35604 -2 - 1281 hypothetical protein - none -
fig|6666666.67468.peg.561 CDS gi|344043862|gb|AFYA01000021.1| 37253 37065 -2 - 189 hypothetical protein - none -
fig|6666666.67468.peg.562 CDS gi|344043862|gb|AFYA01000021.1| 38373 37501 -3 - 873 hypothetical protein - none -
fig|6666666.67468.peg.563 CDS gi|344043862|gb|AFYA01000021.1| 39353 38496 -2 - 858 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67468.peg.564 CDS gi|344043862|gb|AFYA01000021.1| 39404 39526 2 + 123 hypothetical protein - none -
fig|6666666.67468.peg.565 CDS gi|344043862|gb|AFYA01000021.1| 40666 39785 -1 - 882 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67468.peg.566 CDS gi|344043862|gb|AFYA01000021.1| 43237 40667 -1 - 2571 FIG00548000: hypothetical protein - none -
fig|6666666.67468.peg.567 CDS gi|344043862|gb|AFYA01000021.1| 44669 43491 -2 - 1179 FIG00548123: hypothetical protein - none -
fig|6666666.67468.peg.568 CDS gi|344043862|gb|AFYA01000021.1| 45541 44666 -1 - 876 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67468.peg.569 CDS gi|344043862|gb|AFYA01000021.1| 47215 45653 -1 - 1563 putative surface-anchored protein - none -
fig|6666666.67468.peg.570 CDS gi|344043862|gb|AFYA01000021.1| 48500 47769 -2 - 732 Putative conserved integral membrane protein - none -
fig|6666666.67468.peg.571 CDS gi|344043862|gb|AFYA01000021.1| 49636 48497 -1 - 1140 putative amidase - none -
fig|6666666.67468.peg.572 CDS gi|344043862|gb|AFYA01000021.1| 49676 50623 2 + 948 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67468.peg.573 CDS gi|344043862|gb|AFYA01000021.1| 50626 51297 1 + 672 putative phosphoglycerate mutase - none -
fig|6666666.67468.peg.574 CDS gi|344043862|gb|AFYA01000021.1| 51773 51429 -2 - 345 FIG00544953: hypothetical protein - none -
fig|6666666.67468.peg.575 CDS gi|344043862|gb|AFYA01000021.1| 52882 51770 -1 - 1113 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67468.peg.576 CDS gi|344043862|gb|AFYA01000021.1| 53715 52906 -3 - 810 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.67468.peg.577 CDS gi|344043862|gb|AFYA01000021.1| 53853 55121 3 + 1269 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67468.peg.578 CDS gi|344043862|gb|AFYA01000021.1| 55137 56024 3 + 888 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.579 CDS gi|344043862|gb|AFYA01000021.1| 56021 56857 2 + 837 Cof family hydrolase - none -
fig|6666666.67468.peg.580 CDS gi|344043862|gb|AFYA01000021.1| 56910 58439 3 + 1530 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.581 CDS gi|344043862|gb|AFYA01000021.1| 60649 58529 -1 - 2121 FIG00544841: hypothetical protein - none -
fig|6666666.67468.peg.582 CDS gi|344043862|gb|AFYA01000021.1| 60893 62098 2 + 1206 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67468.peg.583 CDS gi|344043862|gb|AFYA01000021.1| 63935 62145 -2 - 1791 Flavin-containing monooxygenase - none -
fig|6666666.67468.peg.584 CDS gi|344043862|gb|AFYA01000021.1| 64102 64776 1 + 675 FIG00547642: hypothetical protein - none -
fig|6666666.67468.peg.585 CDS gi|344043862|gb|AFYA01000021.1| 64786 65265 1 + 480 membrane-associated phospholipid phosphatase - none -
fig|6666666.67468.peg.586 CDS gi|344043862|gb|AFYA01000021.1| 66730 65234 -1 - 1497 FIG00545828: hypothetical protein - none -
fig|6666666.67468.peg.587 CDS gi|344043862|gb|AFYA01000021.1| 66865 68883 1 + 2019 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67468.peg.588 CDS gi|344043862|gb|AFYA01000021.1| 68873 69379 2 + 507 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67468.peg.589 CDS gi|344043862|gb|AFYA01000021.1| 69376 70374 1 + 999 putative membrane protein - none -
fig|6666666.67468.peg.590 CDS gi|344043862|gb|AFYA01000021.1| 70452 72512 3 + 2061 hypothetical protein Rv3805c - none -
fig|6666666.67468.peg.591 CDS gi|344043862|gb|AFYA01000021.1| 72662 73687 2 + 1026 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67468.peg.592 CDS gi|344043862|gb|AFYA01000021.1| 75135 73762 -3 - 1374 FIG00545117: hypothetical protein - none -
fig|6666666.67468.peg.593 CDS gi|344043862|gb|AFYA01000021.1| 75573 75379 -3 - 195 FIG00548721: hypothetical protein - none -
fig|6666666.67468.peg.594 CDS gi|344043862|gb|AFYA01000021.1| 75592 77565 1 + 1974 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67468.peg.595 CDS gi|344043862|gb|AFYA01000021.1| 77568 78068 3 + 501 FIG00544389: hypothetical protein - none -
fig|6666666.67468.peg.596 CDS gi|344043862|gb|AFYA01000021.1| 78072 79001 3 + 930 hypothetical protein Rv3802c - none -
fig|6666666.67468.peg.597 CDS gi|344043862|gb|AFYA01000021.1| 79210 81072 1 + 1863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67468.peg.598 CDS gi|344043862|gb|AFYA01000021.1| 81410 86242 2 + 4833 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.599 CDS gi|344043862|gb|AFYA01000021.1| 86263 87813 1 + 1551 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.67468.peg.600 CDS gi|344043862|gb|AFYA01000021.1| 88457 88092 -2 - 366 FIG00544939: hypothetical protein - none -
fig|6666666.67468.peg.601 CDS gi|344043862|gb|AFYA01000021.1| 89539 88454 -1 - 1086 Possible membrane protein - none -
fig|6666666.67468.peg.602 CDS gi|344043862|gb|AFYA01000021.1| 91862 89544 -2 - 2319 putative integral membrane protein - none -
fig|6666666.67468.peg.603 CDS gi|344043862|gb|AFYA01000021.1| 92556 91870 -3 - 687 FIG00546304: hypothetical protein - none -
fig|6666666.67468.peg.604 CDS gi|344043862|gb|AFYA01000021.1| 93323 92556 -2 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67468.peg.605 CDS gi|344043862|gb|AFYA01000021.1| 94356 93418 -3 - 939 FIG00544860: hypothetical protein - none -
fig|6666666.67468.peg.606 CDS gi|344043862|gb|AFYA01000021.1| 95299 97131 1 + 1833 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.607 CDS gi|344043862|gb|AFYA01000021.1| 97994 97221 -2 - 774 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67468.peg.608 CDS gi|344043862|gb|AFYA01000021.1| 98585 97995 -2 - 591 FIG00544293: hypothetical protein - none -
fig|6666666.67468.peg.609 CDS gi|344043862|gb|AFYA01000021.1| 98623 99726 1 + 1104 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67468.peg.610 CDS gi|344043862|gb|AFYA01000021.1| 101121 99697 -3 - 1425 FIG00547077: hypothetical protein - none -
fig|6666666.67468.peg.611 CDS gi|344043862|gb|AFYA01000021.1| 101946 101128 -3 - 819 FIG00547859: hypothetical protein - none -
fig|6666666.67468.peg.612 CDS gi|344043862|gb|AFYA01000021.1| 101990 103060 2 + 1071 Lysophospholipid acyltransferase - none -
fig|6666666.67468.peg.613 CDS gi|344043946|gb|AFYA01000020.1| 737 582 -2 - 156 hypothetical membrane protein - none -
fig|6666666.67468.peg.614 CDS gi|344043946|gb|AFYA01000020.1| 692 841 2 + 150 hypothetical protein - none -
fig|6666666.67468.peg.615 CDS gi|344043946|gb|AFYA01000020.1| 930 1070 3 + 141 hypothetical protein - none -
fig|6666666.67468.peg.616 CDS gi|344043946|gb|AFYA01000020.1| 1200 2042 3 + 843 FIG00547853: hypothetical protein - none -
fig|6666666.67468.peg.617 CDS gi|344043946|gb|AFYA01000020.1| 2055 3089 3 + 1035 putative lipopolysaccharide biosynthesis protein - none -
fig|6666666.67468.peg.618 CDS gi|344043946|gb|AFYA01000020.1| 3193 4356 1 + 1164 Gluconokinase (EC 2.7.1.12) / oxidoreductase domain D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.67468.peg.619 CDS gi|344043946|gb|AFYA01000020.1| 4356 5204 3 + 849 hypothetical protein - none -
fig|6666666.67468.peg.620 CDS gi|344043946|gb|AFYA01000020.1| 5800 5339 -1 - 462 hypothetical protein - none -
fig|6666666.67468.peg.621 CDS gi|344043946|gb|AFYA01000020.1| 7427 5976 -2 - 1452 hypothetical protein - none -
fig|6666666.67468.peg.622 CDS gi|344043954|gb|AFYA01000019.1| 1774 356 -1 - 1419 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.67468.peg.623 CDS gi|344043954|gb|AFYA01000019.1| 1833 3659 3 + 1827 FIG00545242: hypothetical protein - none -
fig|6666666.67468.peg.624 CDS gi|344043954|gb|AFYA01000019.1| 3686 6463 2 + 2778 FIG00547697: hypothetical protein - none -
fig|6666666.67468.peg.625 CDS gi|344043954|gb|AFYA01000019.1| 6770 6654 -2 - 117 hypothetical protein - none -
fig|6666666.67468.peg.626 CDS gi|344043954|gb|AFYA01000019.1| 6798 7952 3 + 1155 FIG00543985: hypothetical protein - none -
fig|6666666.67468.peg.627 CDS gi|344043954|gb|AFYA01000019.1| 8807 7956 -2 - 852 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67468.peg.628 CDS gi|344043954|gb|AFYA01000019.1| 9425 8808 -2 - 618 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67468.peg.629 CDS gi|344043954|gb|AFYA01000019.1| 10122 9442 -3 - 681 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67468.peg.630 CDS gi|344043954|gb|AFYA01000019.1| 10595 10122 -2 - 474 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67468.peg.631 CDS gi|344043954|gb|AFYA01000019.1| 12332 10620 -2 - 1713 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67468.peg.632 CDS gi|344043954|gb|AFYA01000019.1| 12809 12333 -2 - 477 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67468.peg.633 CDS gi|344043954|gb|AFYA01000019.1| 13105 12836 -1 - 270 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67468.peg.634 CDS gi|344043954|gb|AFYA01000019.1| 13338 13853 3 + 516 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.635 CDS gi|344043954|gb|AFYA01000019.1| 14738 13863 -2 - 876 FIG00549885: hypothetical protein - none -
fig|6666666.67468.peg.636 CDS gi|344043954|gb|AFYA01000019.1| 14867 15769 2 + 903 FIG00547661: hypothetical protein - none -
fig|6666666.67468.peg.637 CDS gi|344043954|gb|AFYA01000019.1| 15779 16753 2 + 975 FIG00543870: hypothetical protein - none -
fig|6666666.67468.peg.638 CDS gi|344043954|gb|AFYA01000019.1| 17992 17066 -1 - 927 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67468.peg.639 CDS gi|344043954|gb|AFYA01000019.1| 18090 18605 3 + 516 FIG00543933: hypothetical protein - none -
fig|6666666.67468.peg.640 CDS gi|344043954|gb|AFYA01000019.1| 18849 20096 3 + 1248 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.67468.peg.641 CDS gi|344043954|gb|AFYA01000019.1| 20216 21667 2 + 1452 permease - none -
fig|6666666.67468.peg.642 CDS gi|344043974|gb|AFYA01000018.1| 74 634 2 + 561 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.67468.peg.643 CDS gi|344043974|gb|AFYA01000018.1| 949 674 -1 - 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67468.peg.644 CDS gi|344043974|gb|AFYA01000018.1| 1122 1598 3 + 477 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67468.peg.645 CDS gi|344043974|gb|AFYA01000018.1| 1621 2286 1 + 666 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.646 CDS gi|344043974|gb|AFYA01000018.1| 2683 2276 -1 - 408 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.647 CDS gi|344043974|gb|AFYA01000018.1| 4151 2694 -2 - 1458 putative transport protein - none -
fig|6666666.67468.peg.648 CDS gi|344043974|gb|AFYA01000018.1| 13424 4434 -2 - 8991 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67468.peg.649 CDS gi|344043974|gb|AFYA01000018.1| 13913 13707 -2 - 207 FIG00546437: hypothetical protein - none -
fig|6666666.67468.peg.650 CDS gi|344043974|gb|AFYA01000018.1| 14848 14021 -1 - 828 hypothetical protein - none -
fig|6666666.67468.peg.651 CDS gi|344043974|gb|AFYA01000018.1| 15380 15955 2 + 576 FIG00544635: hypothetical protein - none -
fig|6666666.67468.peg.652 CDS gi|344043974|gb|AFYA01000018.1| 19351 16142 -1 - 3210 hypothetical protein - none -
fig|6666666.67468.peg.653 CDS gi|344043985|gb|AFYA01000017.1| 425 1291 2 + 867 Histidinol-phosphate aminotransferase (EC 2.6.1.9) @ Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Histidine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67468.peg.654 CDS gi|344043985|gb|AFYA01000017.1| 1281 1703 3 + 423 FIG00547683: hypothetical protein - none -
fig|6666666.67468.peg.655 CDS gi|344043985|gb|AFYA01000017.1| 1706 2620 2 + 915 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67468.peg.656 CDS gi|344043985|gb|AFYA01000017.1| 2982 2617 -3 - 366 FIG00547695: hypothetical protein - none -
fig|6666666.67468.peg.657 CDS gi|344043985|gb|AFYA01000017.1| 3034 3840 1 + 807 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67468.peg.658 CDS gi|344043985|gb|AFYA01000017.1| 3821 4672 2 + 852 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67468.peg.659 CDS gi|344043985|gb|AFYA01000017.1| 4676 5860 2 + 1185 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67468.peg.660 CDS gi|344043985|gb|AFYA01000017.1| 5875 6345 1 + 471 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67468.peg.661 CDS gi|344043985|gb|AFYA01000017.1| 6342 6803 3 + 462 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67468.peg.662 CDS gi|344043985|gb|AFYA01000017.1| 6793 7251 1 + 459 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67468.peg.663 CDS gi|344043985|gb|AFYA01000017.1| 7248 8321 3 + 1074 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67468.peg.664 CDS gi|344043985|gb|AFYA01000017.1| 9206 8313 -2 - 894 FIG00546315: hypothetical protein - none -
fig|6666666.67468.peg.665 CDS gi|344043985|gb|AFYA01000017.1| 9495 9641 3 + 147 hypothetical protein - none -
fig|6666666.67468.peg.666 CDS gi|344043985|gb|AFYA01000017.1| 9866 11353 2 + 1488 FIG00546699: hypothetical protein - none -
fig|6666666.67468.peg.667 CDS gi|344043985|gb|AFYA01000017.1| 11463 11350 -3 - 114 hypothetical protein - none -
fig|6666666.67468.peg.668 CDS gi|344043985|gb|AFYA01000017.1| 11905 12432 1 + 528 FIG00545092: hypothetical protein - none -
fig|6666666.67468.peg.669 CDS gi|344043985|gb|AFYA01000017.1| 12429 13409 3 + 981 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67468.peg.670 CDS gi|344043985|gb|AFYA01000017.1| 14581 13406 -1 - 1176 selenocysteine lyase - none -
fig|6666666.67468.peg.671 CDS gi|344043985|gb|AFYA01000017.1| 14724 15620 3 + 897 O-antigen export system permease protein RfbD - none -
fig|6666666.67468.peg.672 CDS gi|344043985|gb|AFYA01000017.1| 15631 16422 1 + 792 O-antigen export system, ATP-binding protein - none -
fig|6666666.67468.peg.673 CDS gi|344043985|gb|AFYA01000017.1| 16995 17594 3 + 600 FIG00544501: hypothetical protein - none -
fig|6666666.67468.peg.674 CDS gi|344043985|gb|AFYA01000017.1| 17607 18548 3 + 942 Putative glycosyl transferase - none -
fig|6666666.67468.peg.675 CDS gi|344043985|gb|AFYA01000017.1| 19180 18545 -1 - 636 Uncharacterized protein conserved in bacteria - none -
fig|6666666.67468.peg.676 CDS gi|344043985|gb|AFYA01000017.1| 19586 19182 -2 - 405 FIG00544862: hypothetical protein - none -
fig|6666666.67468.peg.677 CDS gi|344043985|gb|AFYA01000017.1| 20031 19597 -3 - 435 FIG00544442: hypothetical protein - none -
fig|6666666.67468.peg.678 CDS gi|344043985|gb|AFYA01000017.1| 20943 20047 -3 - 897 FIG00545361: hypothetical protein - none -
fig|6666666.67468.peg.679 CDS gi|344043985|gb|AFYA01000017.1| 21424 20969 -1 - 456 FIG00547084: hypothetical protein - none -
fig|6666666.67468.peg.680 CDS gi|344043985|gb|AFYA01000017.1| 21894 21421 -3 - 474 FIG00544473: hypothetical protein - none -
fig|6666666.67468.peg.681 CDS gi|344043985|gb|AFYA01000017.1| 21948 22175 3 + 228 FIG00543901: hypothetical protein - none -
fig|6666666.67468.peg.682 CDS gi|344043985|gb|AFYA01000017.1| 22252 23718 1 + 1467 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67468.peg.683 CDS gi|344043985|gb|AFYA01000017.1| 23739 24500 3 + 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67468.peg.684 CDS gi|344043985|gb|AFYA01000017.1| 24670 26703 1 + 2034 putative membrane protein - none -
fig|6666666.67468.peg.685 CDS gi|344043985|gb|AFYA01000017.1| 26696 30169 2 + 3474 putative arabinosyltransferase - none -
fig|6666666.67468.peg.686 CDS gi|344043985|gb|AFYA01000017.1| 30267 30416 3 + 150 hypothetical protein - none -
fig|6666666.67468.peg.687 CDS gi|344043985|gb|AFYA01000017.1| 30462 31949 3 + 1488 FIG00544621: hypothetical protein - none -
fig|6666666.67468.peg.688 CDS gi|344043985|gb|AFYA01000017.1| 33589 32069 -1 - 1521 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67468.peg.689 CDS gi|344043985|gb|AFYA01000017.1| 38121 33589 -3 - 4533 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67468.peg.690 CDS gi|344043985|gb|AFYA01000017.1| 38323 38760 1 + 438 PAS/PAC domain (EC 2.7.3.-) - none -
fig|6666666.67468.peg.691 CDS gi|344044024|gb|AFYA01000016.1| 2978 1347 -2 - 1632 Sodium-dependent transporter - none -
fig|6666666.67468.peg.692 CDS gi|344044024|gb|AFYA01000016.1| 3070 3999 1 + 930 probable transcriptional regulator, LysR family - none -
fig|6666666.67468.peg.693 CDS gi|344044024|gb|AFYA01000016.1| 4102 5178 1 + 1077 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) Glycerate metabolism;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.694 CDS gi|344044024|gb|AFYA01000016.1| 5457 6305 3 + 849 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67468.peg.695 CDS gi|344044024|gb|AFYA01000016.1| 6533 6880 2 + 348 hypothetical protein - none -
fig|6666666.67468.peg.696 CDS gi|344044024|gb|AFYA01000016.1| 6933 7271 3 + 339 FIG00546878: hypothetical protein - none -
fig|6666666.67468.peg.697 CDS gi|344044024|gb|AFYA01000016.1| 7310 8008 2 + 699 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.67468.peg.698 CDS gi|344044024|gb|AFYA01000016.1| 8150 9310 2 + 1161 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67468.peg.699 CDS gi|344044024|gb|AFYA01000016.1| 9307 9717 1 + 411 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67468.peg.700 CDS gi|344044024|gb|AFYA01000016.1| 10978 10280 -1 - 699 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.701 CDS gi|344044024|gb|AFYA01000016.1| 11350 11877 1 + 528 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67468.peg.702 CDS gi|344044024|gb|AFYA01000016.1| 11888 13099 2 + 1212 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.67468.peg.703 CDS gi|344044024|gb|AFYA01000016.1| 15059 13161 -2 - 1899 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67468.peg.704 CDS gi|344044024|gb|AFYA01000016.1| 16447 15209 -1 - 1239 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67468.peg.705 CDS gi|344044024|gb|AFYA01000016.1| 17402 16524 -2 - 879 FIG00545882: hypothetical protein - none -
fig|6666666.67468.peg.706 CDS gi|344044024|gb|AFYA01000016.1| 17949 17500 -3 - 450 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67468.peg.707 CDS gi|344044024|gb|AFYA01000016.1| 18015 18566 3 + 552 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67468.peg.708 CDS gi|344044024|gb|AFYA01000016.1| 18846 18637 -3 - 210 FIG00548543: hypothetical protein - none -
fig|6666666.67468.peg.709 CDS gi|344044024|gb|AFYA01000016.1| 19334 19041 -2 - 294 FIG00545109: hypothetical protein - none -
fig|6666666.67468.peg.710 CDS gi|344044024|gb|AFYA01000016.1| 20327 19485 -2 - 843 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67468.peg.711 CDS gi|344044024|gb|AFYA01000016.1| 20398 21150 1 + 753 Polyphosphate glucokinase (EC 2.7.1.63) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67468.peg.712 CDS gi|344044024|gb|AFYA01000016.1| 21641 23125 2 + 1485 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.67468.peg.713 CDS gi|344044024|gb|AFYA01000016.1| 23726 23851 2 + 126 FIG00546110: hypothetical protein - none -
fig|6666666.67468.peg.714 CDS gi|344044024|gb|AFYA01000016.1| 25247 23910 -2 - 1338 FIG00544571: hypothetical protein - none -
fig|6666666.67468.peg.715 CDS gi|344044024|gb|AFYA01000016.1| 25872 25333 -3 - 540 FIG00545427: hypothetical protein - none -
fig|6666666.67468.peg.716 CDS gi|344044024|gb|AFYA01000016.1| 27717 26005 -3 - 1713 DNA or RNA helicases of superfamily II - none -
fig|6666666.67468.peg.717 CDS gi|344044024|gb|AFYA01000016.1| 27953 27714 -2 - 240 FIG00544358: hypothetical protein - none -
fig|6666666.67468.peg.718 CDS gi|344044024|gb|AFYA01000016.1| 28137 28508 3 + 372 FIG00545207: hypothetical protein - none -
fig|6666666.67468.peg.719 CDS gi|344044024|gb|AFYA01000016.1| 28495 30030 1 + 1536 Putative transferase - none -
fig|6666666.67468.peg.720 CDS gi|344044024|gb|AFYA01000016.1| 30044 30478 2 + 435 D-tyrosyl-tRNA(Tyr) deacylase CBSS-342610.3.peg.283;
D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67468.peg.721 CDS gi|344044024|gb|AFYA01000016.1| 30605 31600 2 + 996 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67468.peg.722 CDS gi|344044024|gb|AFYA01000016.1| 32001 31867 -3 - 135 hypothetical protein - none -
fig|6666666.67468.peg.723 CDS gi|344044024|gb|AFYA01000016.1| 32017 32703 1 + 687 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.724 CDS gi|344044024|gb|AFYA01000016.1| 32710 33699 1 + 990 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67468.peg.725 CDS gi|344044024|gb|AFYA01000016.1| 35021 33696 -2 - 1326 FIG00544535: hypothetical protein - none -
fig|6666666.67468.peg.726 CDS gi|344044024|gb|AFYA01000016.1| 35174 36133 2 + 960 FIG00544614: hypothetical protein - none -
fig|6666666.67468.peg.727 CDS gi|344044024|gb|AFYA01000016.1| 36245 38797 2 + 2553 putative helicase - none -
fig|6666666.67468.peg.728 CDS gi|344044024|gb|AFYA01000016.1| 38928 39911 3 + 984 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67468.peg.729 CDS gi|344044024|gb|AFYA01000016.1| 41104 40025 -1 - 1080 FIG00544563: hypothetical protein - none -
fig|6666666.67468.peg.730 CDS gi|344044024|gb|AFYA01000016.1| 41217 45125 3 + 3909 ATP-dependent helicase HrpA - none -
fig|6666666.67468.peg.731 CDS gi|344044024|gb|AFYA01000016.1| 45619 45167 -1 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67468.peg.732 CDS gi|344044024|gb|AFYA01000016.1| 45926 45726 -2 - 201 FIG00546649: hypothetical protein - none -
fig|6666666.67468.peg.733 CDS gi|344044024|gb|AFYA01000016.1| 46488 47249 3 + 762 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67468.peg.734 CDS gi|344044024|gb|AFYA01000016.1| 47553 48332 3 + 780 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.67468.peg.735 CDS gi|344044024|gb|AFYA01000016.1| 48329 49291 2 + 963 Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67468.peg.736 CDS gi|344044024|gb|AFYA01000016.1| 51051 49354 -3 - 1698 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.67468.peg.737 CDS gi|344044024|gb|AFYA01000016.1| 51598 51395 -1 - 204 hypothetical protein - none -
fig|6666666.67468.peg.738 CDS gi|344044024|gb|AFYA01000016.1| 51612 52262 3 + 651 transcriptional regulator of sugar metabolism - none -
fig|6666666.67468.peg.739 CDS gi|344044024|gb|AFYA01000016.1| 52259 53251 2 + 993 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67468.peg.740 CDS gi|344044024|gb|AFYA01000016.1| 53248 55314 1 + 2067 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67468.peg.741 CDS gi|344044024|gb|AFYA01000016.1| 55492 55761 1 + 270 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization
fig|6666666.67468.peg.742 CDS gi|344044024|gb|AFYA01000016.1| 56969 56442 -2 - 528 FIG00546412: hypothetical protein - none -
fig|6666666.67468.peg.743 CDS gi|344044024|gb|AFYA01000016.1| 58337 57048 -2 - 1290 xanthine/uracil permeases - none -
fig|6666666.67468.peg.744 CDS gi|344044024|gb|AFYA01000016.1| 59907 58378 -3 - 1530 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.67468.peg.745 CDS gi|344044024|gb|AFYA01000016.1| 60109 60840 1 + 732 FIG00546075: hypothetical protein - none -
fig|6666666.67468.peg.746 CDS gi|344044024|gb|AFYA01000016.1| 61036 61575 1 + 540 FIG00543926: hypothetical protein - none -
fig|6666666.67468.peg.747 CDS gi|344044024|gb|AFYA01000016.1| 62405 61572 -2 - 834 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.748 CDS gi|344044024|gb|AFYA01000016.1| 63316 62411 -1 - 906 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.67468.peg.749 CDS gi|344044024|gb|AFYA01000016.1| 63986 63336 -2 - 651 FIG00545147: hypothetical protein - none -
fig|6666666.67468.peg.750 CDS gi|344044024|gb|AFYA01000016.1| 64133 65494 2 + 1362 ATPase involved in DNA repair - none -
fig|6666666.67468.peg.751 CDS gi|344044024|gb|AFYA01000016.1| 65495 66520 2 + 1026 No significant database matches - none -
fig|6666666.67468.peg.752 CDS gi|344044024|gb|AFYA01000016.1| 67523 66852 -2 - 672 FIG00544570: hypothetical protein - none -
fig|6666666.67468.peg.753 CDS gi|344044024|gb|AFYA01000016.1| 69166 67586 -1 - 1581 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67468.peg.754 CDS gi|344044024|gb|AFYA01000016.1| 69508 70236 1 + 729 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.67468.peg.755 CDS gi|344044024|gb|AFYA01000016.1| 70354 71241 1 + 888 glutamate-binding protein GluB - none -
fig|6666666.67468.peg.756 CDS gi|344044024|gb|AFYA01000016.1| 71363 72049 2 + 687 glutamate ABC-type transporter, permease component - none -
fig|6666666.67468.peg.757 CDS gi|344044024|gb|AFYA01000016.1| 72049 72996 1 + 948 glutamate transporter permease protein GluD - none -
fig|6666666.67468.peg.758 CDS gi|344044024|gb|AFYA01000016.1| 73676 73029 -2 - 648 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67468.peg.759 CDS gi|344044024|gb|AFYA01000016.1| 74850 73720 -3 - 1131 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67468.peg.760 CDS gi|344044024|gb|AFYA01000016.1| 74826 74945 3 + 120 hypothetical protein - none -
fig|6666666.67468.peg.761 CDS gi|344044024|gb|AFYA01000016.1| 75340 75125 -1 - 216 FIG00545605: hypothetical protein - none -
fig|6666666.67468.peg.762 CDS gi|344044024|gb|AFYA01000016.1| 76272 76877 3 + 606 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67468.peg.763 CDS gi|344044024|gb|AFYA01000016.1| 76910 77602 2 + 693 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67468.peg.764 CDS gi|344044024|gb|AFYA01000016.1| 77599 78210 1 + 612 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67468.peg.765 CDS gi|344044024|gb|AFYA01000016.1| 79117 78287 -1 - 831 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67468.peg.766 CDS gi|344044024|gb|AFYA01000016.1| 79670 79347 -2 - 324 putative transcription regulator - none -
fig|6666666.67468.peg.767 CDS gi|344044024|gb|AFYA01000016.1| 80246 79728 -2 - 519 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin synthesis cluster
fig|6666666.67468.peg.768 CDS gi|344044024|gb|AFYA01000016.1| 80855 80250 -2 - 606 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.769 CDS gi|344044024|gb|AFYA01000016.1| 81050 81337 2 + 288 FIG00544062: hypothetical protein - none -
fig|6666666.67468.peg.770 CDS gi|344044024|gb|AFYA01000016.1| 82586 81477 -2 - 1110 Integral membrane protein TerC - none -
fig|6666666.67468.peg.771 CDS gi|344044024|gb|AFYA01000016.1| 85852 82973 -1 - 2880 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67468.peg.772 CDS gi|344044024|gb|AFYA01000016.1| 86706 86071 -3 - 636 FIG00544433: hypothetical protein - none -
fig|6666666.67468.peg.773 CDS gi|344044024|gb|AFYA01000016.1| 88957 86801 -1 - 2157 Ribonuclease J2 (endoribonuclease in RNA processing) Ribonucleases in Bacillus
fig|6666666.67468.peg.774 CDS gi|344044024|gb|AFYA01000016.1| 89865 88960 -3 - 906 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67468.peg.775 CDS gi|344044024|gb|AFYA01000016.1| 90818 90066 -2 - 753 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67468.peg.776 CDS gi|344044024|gb|AFYA01000016.1| 91616 90870 -2 - 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67468.peg.777 CDS gi|344044024|gb|AFYA01000016.1| 91842 92498 3 + 657 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.67468.peg.778 CDS gi|344044024|gb|AFYA01000016.1| 94872 92611 -3 - 2262 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.67468.peg.779 CDS gi|344044024|gb|AFYA01000016.1| 94891 95154 1 + 264 hypothetical protein - none -
fig|6666666.67468.peg.780 CDS gi|344044024|gb|AFYA01000016.1| 95384 95115 -2 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.67468.peg.781 CDS gi|344044024|gb|AFYA01000016.1| 96508 95558 -1 - 951 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.782 CDS gi|344044024|gb|AFYA01000016.1| 97623 96598 -3 - 1026 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67468.peg.783 CDS gi|344044024|gb|AFYA01000016.1| 97655 98548 2 + 894 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67468.peg.784 CDS gi|344044024|gb|AFYA01000016.1| 99557 98904 -2 - 654 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.67468.peg.785 CDS gi|344044024|gb|AFYA01000016.1| 100353 99547 -3 - 807 putative SimX4 homolog - none -
fig|6666666.67468.peg.786 CDS gi|344044024|gb|AFYA01000016.1| 101744 100437 -2 - 1308 putative DNA-damage-inducible protein F - none -
fig|6666666.67468.peg.787 CDS gi|344044024|gb|AFYA01000016.1| 102735 101737 -3 - 999 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67468.peg.788 CDS gi|344044024|gb|AFYA01000016.1| 103190 102741 -2 - 450 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67468.peg.789 CDS gi|344044024|gb|AFYA01000016.1| 106418 103398 -2 - 3021 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.67468.peg.790 CDS gi|344044024|gb|AFYA01000016.1| 106874 106536 -2 - 339 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67468.peg.791 CDS gi|344044024|gb|AFYA01000016.1| 108070 107072 -1 - 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67468.peg.792 CDS gi|344044024|gb|AFYA01000016.1| 108640 108104 -1 - 537 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67468.peg.793 CDS gi|344044024|gb|AFYA01000016.1| 108695 109513 2 + 819 FIG00544866: hypothetical protein - none -
fig|6666666.67468.peg.794 CDS gi|344044024|gb|AFYA01000016.1| 109937 111535 2 + 1599 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.67468.peg.795 CDS gi|344044024|gb|AFYA01000016.1| 111714 112640 3 + 927 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.796 CDS gi|344044024|gb|AFYA01000016.1| 112633 113670 1 + 1038 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.797 CDS gi|344044024|gb|AFYA01000016.1| 113667 115400 3 + 1734 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.798 CDS gi|344044024|gb|AFYA01000016.1| 117258 115492 -3 - 1767 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.67468.peg.799 CDS gi|344044024|gb|AFYA01000016.1| 117346 118083 1 + 738 UPF0246 protein YaaA - none -
fig|6666666.67468.peg.800 CDS gi|344044024|gb|AFYA01000016.1| 118826 118080 -2 - 747 ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67468.peg.801 CDS gi|344044024|gb|AFYA01000016.1| 119949 118846 -3 - 1104 ChlI component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67468.peg.802 CDS gi|344044024|gb|AFYA01000016.1| 120878 120084 -2 - 795 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.803 CDS gi|344044024|gb|AFYA01000016.1| 120933 122357 3 + 1425 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67468.peg.804 CDS gi|344044024|gb|AFYA01000016.1| 123299 122397 -2 - 903 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.67468.peg.805 CDS gi|344044024|gb|AFYA01000016.1| 125046 123544 -3 - 1503 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67468.peg.806 CDS gi|344044024|gb|AFYA01000016.1| 125435 126460 2 + 1026 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67468.peg.807 CDS gi|344044024|gb|AFYA01000016.1| 126598 127995 1 + 1398 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67468.peg.808 CDS gi|344044024|gb|AFYA01000016.1| 128418 128765 3 + 348 FIG00544201: hypothetical protein - none -
fig|6666666.67468.peg.809 CDS gi|344044024|gb|AFYA01000016.1| 128822 129175 2 + 354 FIG00544201: hypothetical protein - none -
fig|6666666.67468.peg.810 CDS gi|344044024|gb|AFYA01000016.1| 129250 130035 1 + 786 hypothetical membrane protein - none -
fig|6666666.67468.peg.811 CDS gi|344044024|gb|AFYA01000016.1| 130916 130032 -2 - 885 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67468.peg.812 CDS gi|344044024|gb|AFYA01000016.1| 132837 130969 -3 - 1869 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.813 CDS gi|344044024|gb|AFYA01000016.1| 133524 132892 -3 - 633 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.814 CDS gi|344044024|gb|AFYA01000016.1| 134654 133521 -2 - 1134 two-component system, sensor protein - none -
fig|6666666.67468.peg.815 CDS gi|344044024|gb|AFYA01000016.1| 134765 135724 2 + 960 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.816 CDS gi|344044024|gb|AFYA01000016.1| 135740 136432 2 + 693 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67468.peg.817 CDS gi|344044024|gb|AFYA01000016.1| 136692 136579 -3 - 114 hypothetical protein - none -
fig|6666666.67468.peg.818 CDS gi|344044024|gb|AFYA01000016.1| 138204 137023 -3 - 1182 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67468.peg.819 CDS gi|344044024|gb|AFYA01000016.1| 139556 138342 -2 - 1215 Membrane-associated zinc metalloprotease - none -
fig|6666666.67468.peg.820 CDS gi|344044024|gb|AFYA01000016.1| 140754 139576 -3 - 1179 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67468.peg.821 CDS gi|344044024|gb|AFYA01000016.1| 140998 141441 1 + 444 hypothetical membrane protein - none -
fig|6666666.67468.peg.822 CDS gi|344044024|gb|AFYA01000016.1| 143076 141496 -3 - 1581 FIG00546336: hypothetical protein - none -
fig|6666666.67468.peg.823 CDS gi|344044024|gb|AFYA01000016.1| 143934 143077 -3 - 858 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67468.peg.824 CDS gi|344044024|gb|AFYA01000016.1| 145225 144125 -1 - 1101 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67468.peg.825 CDS gi|344044024|gb|AFYA01000016.1| 145333 145818 1 + 486 FIG00544474: hypothetical protein - none -
fig|6666666.67468.peg.826 CDS gi|344044024|gb|AFYA01000016.1| 146799 145906 -3 - 894 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.827 CDS gi|344044024|gb|AFYA01000016.1| 147514 146957 -1 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67468.peg.828 CDS gi|344044024|gb|AFYA01000016.1| 148293 147607 -3 - 687 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67468.peg.829 CDS gi|344044024|gb|AFYA01000016.1| 148441 148322 -1 - 120 hypothetical protein - none -
fig|6666666.67468.peg.830 CDS gi|344044024|gb|AFYA01000016.1| 149501 148674 -2 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67468.peg.831 CDS gi|344044024|gb|AFYA01000016.1| 150535 149741 -1 - 795 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.67468.peg.832 CDS gi|344044024|gb|AFYA01000016.1| 150963 151412 3 + 450 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.67468.peg.833 CDS gi|344044024|gb|AFYA01000016.1| 152356 151409 -1 - 948 Tyrosine recombinase XerC - none -
fig|6666666.67468.peg.834 CDS gi|344044024|gb|AFYA01000016.1| 153714 152530 -3 - 1185 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67468.peg.835 CDS gi|344044024|gb|AFYA01000016.1| 155234 153711 -2 - 1524 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67468.peg.836 CDS gi|344044024|gb|AFYA01000016.1| 155589 155221 -3 - 369 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.67468.peg.837 CDS gi|344044024|gb|AFYA01000016.1| 156214 155909 -1 - 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67468.peg.838 CDS gi|344044024|gb|AFYA01000016.1| 156840 156211 -3 - 630 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H;
Ribonucleases in Bacillus
fig|6666666.67468.peg.839 CDS gi|344044024|gb|AFYA01000016.1| 157694 156906 -2 - 789 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67468.peg.840 CDS gi|344044024|gb|AFYA01000016.1| 157874 158818 2 + 945 ABC-type transport systems, periplasmic component - none -
fig|6666666.67468.peg.841 CDS gi|344044024|gb|AFYA01000016.1| 159620 159279 -2 - 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67468.peg.842 CDS gi|344044024|gb|AFYA01000016.1| 159983 160648 2 + 666 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67468.peg.843 CDS gi|344044024|gb|AFYA01000016.1| 160645 161769 1 + 1125 Glycine oxidase ThiO (EC 1.4.3.19) @ Opine oxidase subunit B Thiamin biosynthesis
fig|6666666.67468.peg.844 CDS gi|344044024|gb|AFYA01000016.1| 161783 161980 2 + 198 hypothetical protein - none -
fig|6666666.67468.peg.845 CDS gi|344044024|gb|AFYA01000016.1| 161982 162764 3 + 783 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67468.peg.846 CDS gi|344044024|gb|AFYA01000016.1| 162766 163842 1 + 1077 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67468.peg.847 CDS gi|344044024|gb|AFYA01000016.1| 166333 164057 -1 - 2277 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67468.peg.848 CDS gi|344044024|gb|AFYA01000016.1| 167327 166344 -2 - 984 transcriptional regulator - none -
fig|6666666.67468.peg.849 CDS gi|344044024|gb|AFYA01000016.1| 168500 167358 -2 - 1143 2-oxoglutarate/malate translocator - none -
fig|6666666.67468.peg.850 CDS gi|344044024|gb|AFYA01000016.1| 168709 168488 -1 - 222 2-oxoglutarate/malate translocator - none -
fig|6666666.67468.peg.851 CDS gi|344044024|gb|AFYA01000016.1| 169544 168756 -2 - 789 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.852 CDS gi|344044024|gb|AFYA01000016.1| 170110 169841 -1 - 270 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.853 CDS gi|344044180|gb|AFYA01000015.1| 691 2166 1 + 1476 Major myo-inositol transporter IolT Inositol catabolism
fig|6666666.67468.peg.854 CDS gi|344044180|gb|AFYA01000015.1| 2358 2480 3 + 123 hypothetical protein - none -
fig|6666666.67468.peg.855 CDS gi|344044180|gb|AFYA01000015.1| 3130 4122 1 + 993 transcriptional regulator - none -
fig|6666666.67468.peg.856 CDS gi|344044180|gb|AFYA01000015.1| 4142 4570 2 + 429 FIG00547969: hypothetical protein - none -
fig|6666666.67468.peg.857 CDS gi|344044180|gb|AFYA01000015.1| 5180 4608 -2 - 573 hypothetical protein - none -
fig|6666666.67468.peg.858 CDS gi|344044180|gb|AFYA01000015.1| 6180 5203 -3 - 978 transcriptional regulator, LacI family - none -
fig|6666666.67468.peg.859 CDS gi|344044180|gb|AFYA01000015.1| 6977 6177 -2 - 801 hypothetical protein - none -
fig|6666666.67468.peg.860 CDS gi|344044180|gb|AFYA01000015.1| 8084 6984 -2 - 1101 ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.861 CDS gi|344044180|gb|AFYA01000015.1| 9298 8129 -1 - 1170 CELL PROCESSES - none -
fig|6666666.67468.peg.862 CDS gi|344044180|gb|AFYA01000015.1| 11128 9410 -1 - 1719 Ferric iron ABC transporter, permease protein - none -
fig|6666666.67468.peg.863 CDS gi|344044180|gb|AFYA01000015.1| 11757 11554 -3 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67468.peg.864 CDS gi|344044180|gb|AFYA01000015.1| 13128 12115 -3 - 1014 sugar phosphate isomerase/epimerase - none -
fig|6666666.67468.peg.865 CDS gi|344044180|gb|AFYA01000015.1| 14373 13144 -3 - 1230 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Inositol catabolism
fig|6666666.67468.peg.866 CDS gi|344044180|gb|AFYA01000015.1| 14513 15511 2 + 999 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.67468.peg.867 CDS gi|344044180|gb|AFYA01000015.1| 16353 15895 -3 - 459 FIG00547096: hypothetical protein - none -
fig|6666666.67468.peg.868 CDS gi|344044180|gb|AFYA01000015.1| 17506 16481 -1 - 1026 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Inositol catabolism
fig|6666666.67468.peg.869 CDS gi|344044180|gb|AFYA01000015.1| 18895 17534 -1 - 1362 FIG00544057: hypothetical protein - none -
fig|6666666.67468.peg.870 CDS gi|344044180|gb|AFYA01000015.1| 19861 18989 -1 - 873 Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1) Inositol catabolism
fig|6666666.67468.peg.871 CDS gi|344044180|gb|AFYA01000015.1| 20887 19874 -1 - 1014 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Inositol catabolism
fig|6666666.67468.peg.872 CDS gi|344044180|gb|AFYA01000015.1| 21876 20920 -3 - 957 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.67468.peg.873 CDS gi|344044180|gb|AFYA01000015.1| 23830 21917 -1 - 1914 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.67468.peg.874 CDS gi|344044180|gb|AFYA01000015.1| 24727 23837 -1 - 891 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.67468.peg.875 CDS gi|344044180|gb|AFYA01000015.1| 26262 24748 -3 - 1515 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.67468.peg.876 CDS gi|344044180|gb|AFYA01000015.1| 27199 26276 -1 - 924 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [form 2] (EC 4.1.2.29) Inositol catabolism
fig|6666666.67468.peg.877 CDS gi|344044180|gb|AFYA01000015.1| 28220 27201 -2 - 1020 5-keto-2-deoxygluconokinase (EC 2.7.1.92) Inositol catabolism
fig|6666666.67468.peg.878 CDS gi|344044180|gb|AFYA01000015.1| 28286 28420 2 + 135 hypothetical protein - none -
fig|6666666.67468.peg.879 CDS gi|344044180|gb|AFYA01000015.1| 28600 29361 1 + 762 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.880 CDS gi|344044180|gb|AFYA01000015.1| 30741 29776 -3 - 966 FIG00546743: hypothetical protein - none -
fig|6666666.67468.peg.881 CDS gi|344044180|gb|AFYA01000015.1| 31481 30738 -2 - 744 FIG00544951: hypothetical protein - none -
fig|6666666.67468.peg.882 CDS gi|344044180|gb|AFYA01000015.1| 31584 33512 3 + 1929 putative endopeptidase - none -
fig|6666666.67468.peg.883 CDS gi|344044180|gb|AFYA01000015.1| 34203 33580 -3 - 624 No significant database matches - none -
fig|6666666.67468.peg.884 CDS gi|344044180|gb|AFYA01000015.1| 35133 34372 -3 - 762 putative transcription regulator - none -
fig|6666666.67468.peg.885 CDS gi|344044180|gb|AFYA01000015.1| 36205 35201 -1 - 1005 hypothetical protein - none -
fig|6666666.67468.peg.886 CDS gi|344044180|gb|AFYA01000015.1| 37414 37115 -1 - 300 putative translation initiation inhibitor - none -
fig|6666666.67468.peg.887 CDS gi|344044180|gb|AFYA01000015.1| 37708 38616 1 + 909 FIG00544069: hypothetical protein - none -
fig|6666666.67468.peg.888 CDS gi|344044180|gb|AFYA01000015.1| 39506 38613 -2 - 894 FIG00546976: hypothetical protein - none -
fig|6666666.67468.peg.889 CDS gi|344044180|gb|AFYA01000015.1| 39947 39603 -2 - 345 FIG00545554: hypothetical protein - none -
fig|6666666.67468.peg.890 CDS gi|344044180|gb|AFYA01000015.1| 40814 39960 -2 - 855 lactoylglutathione lyase-like protein - none -
fig|6666666.67468.peg.891 CDS gi|344044180|gb|AFYA01000015.1| 41107 40814 -1 - 294 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67468.peg.892 CDS gi|344044180|gb|AFYA01000015.1| 41357 41142 -2 - 216 L-lysine permease - none -
fig|6666666.67468.peg.893 CDS gi|344044180|gb|AFYA01000015.1| 41823 41365 -3 - 459 L-lysine permease - none -
fig|6666666.67468.peg.894 CDS gi|344044180|gb|AFYA01000015.1| 42237 41836 -3 - 402 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67468.peg.895 CDS gi|344044180|gb|AFYA01000015.1| 43129 42437 -1 - 693 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67468.peg.896 CDS gi|344044180|gb|AFYA01000015.1| 43156 43833 1 + 678 putative acetyltransferase - none -
fig|6666666.67468.peg.897 CDS gi|344044180|gb|AFYA01000015.1| 44103 43807 -3 - 297 membrane protein - none -
fig|6666666.67468.peg.898 CDS gi|344044180|gb|AFYA01000015.1| 44715 46754 3 + 2040 ATP-dependent helicase HrpB - none -
fig|6666666.67468.peg.899 CDS gi|344044180|gb|AFYA01000015.1| 47540 47163 -2 - 378 FIG00544309: hypothetical protein - none -
fig|6666666.67468.peg.900 CDS gi|344044180|gb|AFYA01000015.1| 48390 47608 -3 - 783 FIG00545045: hypothetical protein - none -
fig|6666666.67468.peg.901 CDS gi|344044180|gb|AFYA01000015.1| 48527 49018 2 + 492 FIG00547604: hypothetical protein - none -
fig|6666666.67468.peg.902 CDS gi|344044180|gb|AFYA01000015.1| 49051 50190 1 + 1140 FIG00545643: hypothetical protein - none -
fig|6666666.67468.peg.903 CDS gi|344044180|gb|AFYA01000015.1| 51787 50198 -1 - 1590 FIG00545896: hypothetical protein - none -
fig|6666666.67468.peg.904 CDS gi|344044180|gb|AFYA01000015.1| 52001 52411 2 + 411 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67468.peg.905 CDS gi|344044180|gb|AFYA01000015.1| 52743 52408 -3 - 336 FIG00546720: hypothetical protein - none -
fig|6666666.67468.peg.906 CDS gi|344044180|gb|AFYA01000015.1| 53459 52740 -2 - 720 FIG00544989: hypothetical protein - none -
fig|6666666.67468.peg.907 CDS gi|344044180|gb|AFYA01000015.1| 53642 54466 2 + 825 FIG00548151: hypothetical protein - none -
fig|6666666.67468.peg.908 CDS gi|344044180|gb|AFYA01000015.1| 55250 54498 -2 - 753 FIG00545943: hypothetical protein - none -
fig|6666666.67468.peg.909 CDS gi|344044180|gb|AFYA01000015.1| 55846 55313 -1 - 534 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.910 CDS gi|344044180|gb|AFYA01000015.1| 57261 55942 -3 - 1320 D-galactonate transporter - none -
fig|6666666.67468.peg.911 CDS gi|344044180|gb|AFYA01000015.1| 57899 57264 -2 - 636 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) Entner-Doudoroff Pathway
fig|6666666.67468.peg.912 CDS gi|344044180|gb|AFYA01000015.1| 58056 58847 3 + 792 DeoR family transcriptional regulator probably related to glycerate, glycolaldehyde metabolism - none -
fig|6666666.67468.peg.913 CDS gi|344044180|gb|AFYA01000015.1| 59911 58844 -1 - 1068 FIG00544031: hypothetical protein - none -
fig|6666666.67468.peg.914 CDS gi|344044180|gb|AFYA01000015.1| 60114 61100 3 + 987 hypothetical protein - none -
fig|6666666.67468.peg.915 CDS gi|344044180|gb|AFYA01000015.1| 61140 62414 3 + 1275 permease of the major facilitator superfamily - none -
fig|6666666.67468.peg.916 CDS gi|344044180|gb|AFYA01000015.1| 62568 63650 3 + 1083 FIG00546074: hypothetical protein - none -
fig|6666666.67468.peg.917 CDS gi|344044180|gb|AFYA01000015.1| 64194 63634 -3 - 561 carbonic anhydrase, family 3 - none -
fig|6666666.67468.peg.918 CDS gi|344044180|gb|AFYA01000015.1| 64796 64191 -2 - 606 FIG00546535: hypothetical protein - none -
fig|6666666.67468.peg.919 CDS gi|344044180|gb|AFYA01000015.1| 64907 65806 2 + 900 esterase/lipase - none -
fig|6666666.67468.peg.920 CDS gi|344044180|gb|AFYA01000015.1| 65936 65817 -2 - 120 FIG00549019: hypothetical protein - none -
fig|6666666.67468.peg.921 CDS gi|344044180|gb|AFYA01000015.1| 66472 65972 -1 - 501 FIG00549019: hypothetical protein - none -
fig|6666666.67468.peg.922 CDS gi|344044180|gb|AFYA01000015.1| 66562 67131 1 + 570 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.67468.peg.923 CDS gi|344044180|gb|AFYA01000015.1| 67305 68522 3 + 1218 FIG00546351: hypothetical protein - none -
fig|6666666.67468.peg.924 CDS gi|344044180|gb|AFYA01000015.1| 68620 69429 1 + 810 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.67468.peg.925 CDS gi|344044180|gb|AFYA01000015.1| 69429 70268 3 + 840 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67468.peg.926 CDS gi|344044180|gb|AFYA01000015.1| 71647 70265 -1 - 1383 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.67468.peg.927 CDS gi|344044180|gb|AFYA01000015.1| 72497 71649 -2 - 849 FIG00548349: hypothetical protein - none -
fig|6666666.67468.peg.928 CDS gi|344044180|gb|AFYA01000015.1| 72777 74114 3 + 1338 Ribitol/Xylitol/Arabitol transporter, MFS superfamily - none -
fig|6666666.67468.peg.929 CDS gi|344044180|gb|AFYA01000015.1| 74159 75670 2 + 1512 Multiple polyol-specific dehydrogenase (EC 1.1.1.-) - none -
fig|6666666.67468.peg.930 CDS gi|344044180|gb|AFYA01000015.1| 75804 76208 3 + 405 phosphohistidine phosphatase SixA - none -
fig|6666666.67468.peg.931 CDS gi|344044180|gb|AFYA01000015.1| 76600 76211 -1 - 390 FIG00544738: hypothetical protein - none -
fig|6666666.67468.peg.932 CDS gi|344044180|gb|AFYA01000015.1| 76856 76725 -2 - 132 hypothetical protein - none -
fig|6666666.67468.peg.933 CDS gi|344044180|gb|AFYA01000015.1| 77032 77805 1 + 774 FIG00548787: hypothetical protein - none -
fig|6666666.67468.peg.934 CDS gi|344044180|gb|AFYA01000015.1| 78029 78241 2 + 213 hypothetical protein - none -
fig|6666666.67468.peg.935 CDS gi|344044180|gb|AFYA01000015.1| 78242 78370 2 + 129 hypothetical protein - none -
fig|6666666.67468.peg.936 CDS gi|344044180|gb|AFYA01000015.1| 78929 78612 -2 - 318 hypothetical membrane protein - none -
fig|6666666.67468.peg.937 CDS gi|344044180|gb|AFYA01000015.1| 79300 78932 -1 - 369 FIG00544824: hypothetical protein - none -
fig|6666666.67468.peg.938 CDS gi|344044180|gb|AFYA01000015.1| 79766 79359 -2 - 408 transcriptional regulator, LysR family - none -
fig|6666666.67468.peg.939 CDS gi|344044180|gb|AFYA01000015.1| 80146 80274 1 + 129 hypothetical protein - none -
fig|6666666.67468.peg.940 CDS gi|344044180|gb|AFYA01000015.1| 81356 80271 -2 - 1086 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.941 CDS gi|344044180|gb|AFYA01000015.1| 82826 81372 -2 - 1455 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.942 CDS gi|344044180|gb|AFYA01000015.1| 83270 82836 -2 - 435 hypothetical protein - none -
fig|6666666.67468.peg.943 CDS gi|344044180|gb|AFYA01000015.1| 84827 83277 -2 - 1551 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.67468.peg.944 CDS gi|344044180|gb|AFYA01000015.1| 85407 84820 -3 - 588 TRAP-type C4-dicarboxylate transport system, small permease component TRAP Transporter collection
fig|6666666.67468.peg.945 CDS gi|344044180|gb|AFYA01000015.1| 86755 85535 -1 - 1221 TRAP transporter solute receptor, unknown substrate 7 - none -
fig|6666666.67468.peg.946 CDS gi|344044180|gb|AFYA01000015.1| 86971 87093 1 + 123 hypothetical protein - none -
fig|6666666.67468.peg.947 CDS gi|344044180|gb|AFYA01000015.1| 87093 88412 3 + 1320 putative cytochrome P450 hydroxylase - none -
fig|6666666.67468.peg.948 CDS gi|344044180|gb|AFYA01000015.1| 90028 88529 -1 - 1500 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.949 CDS gi|344044180|gb|AFYA01000015.1| 90958 90203 -1 - 756 hypothetical protein - none -
fig|6666666.67468.peg.950 CDS gi|344044180|gb|AFYA01000015.1| 90988 92604 1 + 1617 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67468.peg.951 CDS gi|344044180|gb|AFYA01000015.1| 93139 92669 -1 - 471 hypothetical protein - none -
fig|6666666.67468.peg.952 CDS gi|344044180|gb|AFYA01000015.1| 93837 93136 -3 - 702 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.953 CDS gi|344044180|gb|AFYA01000015.1| 94784 93984 -2 - 801 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Glycerate metabolism
fig|6666666.67468.peg.954 CDS gi|344044180|gb|AFYA01000015.1| 96153 94777 -3 - 1377 Fumarate reductase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase
fig|6666666.67468.peg.955 CDS gi|344044180|gb|AFYA01000015.1| 97379 96153 -2 - 1227 MFS transporter - none -
fig|6666666.67468.peg.956 CDS gi|344044180|gb|AFYA01000015.1| 98179 97397 -1 - 783 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.957 CDS gi|344044180|gb|AFYA01000015.1| 98422 98228 -1 - 195 Ferredoxin Inorganic Sulfur Assimilation;
Soluble cytochromes and functionally related electron carriers
fig|6666666.67468.peg.958 CDS gi|344044180|gb|AFYA01000015.1| 99630 98452 -3 - 1179 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.67468.peg.959 CDS gi|344044180|gb|AFYA01000015.1| 100883 99630 -2 - 1254 putative cytochrome P450 hydroxylase - none -
fig|6666666.67468.peg.960 CDS gi|344044180|gb|AFYA01000015.1| 100989 101915 3 + 927 Isocitrate lyase (EC 4.1.3.1) Glyoxylate bypass;
Glyoxylate bypass cluster;
Serine-glyoxylate cycle
fig|6666666.67468.peg.961 CDS gi|344044180|gb|AFYA01000015.1| 103377 101989 -3 - 1389 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67468.peg.962 CDS gi|344044180|gb|AFYA01000015.1| 105000 103384 -3 - 1617 FIG00544709: hypothetical protein - none -
fig|6666666.67468.peg.963 CDS gi|344044286|gb|AFYA01000014.1| 245 535 2 + 291 predicted acetyltransferase - none -
fig|6666666.67468.peg.964 CDS gi|344044286|gb|AFYA01000014.1| 1257 691 -3 - 567 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67468.peg.965 CDS gi|344044286|gb|AFYA01000014.1| 2369 1434 -2 - 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67468.peg.966 CDS gi|344044286|gb|AFYA01000014.1| 2688 2563 -3 - 126 hypothetical protein - none -
fig|6666666.67468.peg.967 CDS gi|344044286|gb|AFYA01000014.1| 3067 3912 1 + 846 Putative transcriptional regulator - none -
fig|6666666.67468.peg.968 CDS gi|344044286|gb|AFYA01000014.1| 4544 3972 -2 - 573 Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67468.peg.969 CDS gi|344044286|gb|AFYA01000014.1| 4605 5861 3 + 1257 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67468.peg.970 CDS gi|344044294|gb|AFYA01000013.1| 654 181 -3 - 474 FIG00543905: hypothetical protein - none -
fig|6666666.67468.peg.971 CDS gi|344044294|gb|AFYA01000013.1| 934 2367 1 + 1434 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.972 CDS gi|344044294|gb|AFYA01000013.1| 2679 2512 -3 - 168 FIG00545761: hypothetical protein - none -
fig|6666666.67468.peg.973 CDS gi|344044294|gb|AFYA01000013.1| 3417 3016 -3 - 402 FIG00548088: hypothetical protein - none -
fig|6666666.67468.peg.974 CDS gi|344044294|gb|AFYA01000013.1| 3950 3414 -2 - 537 FIG00544729: hypothetical protein - none -
fig|6666666.67468.peg.975 CDS gi|344044294|gb|AFYA01000013.1| 3969 4106 3 + 138 FIG00548623: hypothetical protein - none -
fig|6666666.67468.peg.976 CDS gi|344044294|gb|AFYA01000013.1| 4030 4938 1 + 909 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase( EC:1.14.14.3 ) - none -
fig|6666666.67468.peg.977 CDS gi|344044294|gb|AFYA01000013.1| 4976 5335 2 + 360 FIG00544301: hypothetical protein - none -
fig|6666666.67468.peg.978 CDS gi|344044294|gb|AFYA01000013.1| 7219 5774 -1 - 1446 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67468.peg.979 CDS gi|344044294|gb|AFYA01000013.1| 7360 7578 1 + 219 FIG00548368: hypothetical protein - none -
fig|6666666.67468.peg.980 CDS gi|344044294|gb|AFYA01000013.1| 7797 9023 3 + 1227 FIG00545265: hypothetical protein - none -
fig|6666666.67468.peg.981 CDS gi|344044294|gb|AFYA01000013.1| 9040 10311 1 + 1272 hypothetical protein - none -
fig|6666666.67468.peg.982 CDS gi|344044294|gb|AFYA01000013.1| 10801 10328 -1 - 474 FIG01270316: hypothetical protein - none -
fig|6666666.67468.peg.983 CDS gi|344044294|gb|AFYA01000013.1| 11585 10938 -2 - 648 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.984 CDS gi|344044294|gb|AFYA01000013.1| 14917 11780 -1 - 3138 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.67468.peg.985 CDS gi|344044294|gb|AFYA01000013.1| 16324 14984 -1 - 1341 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.986 CDS gi|344044294|gb|AFYA01000013.1| 16521 17627 3 + 1107 FIG00544769: hypothetical protein - none -
fig|6666666.67468.peg.987 CDS gi|344044294|gb|AFYA01000013.1| 17768 19585 2 + 1818 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.67468.peg.988 CDS gi|344044294|gb|AFYA01000013.1| 19820 19638 -2 - 183 FIG00544054: hypothetical protein - none -
fig|6666666.67468.peg.989 CDS gi|344044294|gb|AFYA01000013.1| 19959 21254 3 + 1296 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.67468.peg.990 CDS gi|344044294|gb|AFYA01000013.1| 22690 21281 -1 - 1410 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.67468.peg.991 CDS gi|344044294|gb|AFYA01000013.1| 24726 23578 -3 - 1149 FIG006762: Phosphoglycerate mutase family - none -
fig|6666666.67468.peg.992 CDS gi|344044294|gb|AFYA01000013.1| 25458 24739 -3 - 720 FIG137478: Hypothetical protein - none -
fig|6666666.67468.peg.993 CDS gi|344044294|gb|AFYA01000013.1| 26630 25488 -2 - 1143 UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain - none -
fig|6666666.67468.peg.994 CDS gi|344044294|gb|AFYA01000013.1| 26712 27368 3 + 657 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.67468.peg.995 CDS gi|344044294|gb|AFYA01000013.1| 27355 27855 1 + 501 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.67468.peg.996 CDS gi|344044294|gb|AFYA01000013.1| 27890 28891 2 + 1002 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67468.peg.997 CDS gi|344044294|gb|AFYA01000013.1| 30044 29613 -2 - 432 FIG00544601: hypothetical protein - none -
fig|6666666.67468.peg.998 CDS gi|344044294|gb|AFYA01000013.1| 30711 33479 3 + 2769 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.999 CDS gi|344044294|gb|AFYA01000013.1| 34347 33556 -3 - 792 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1000 CDS gi|344044294|gb|AFYA01000013.1| 35241 34351 -3 - 891 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.1001 CDS gi|344044294|gb|AFYA01000013.1| 36230 35238 -2 - 993 ABC transporter substrate-binding protein - none -
fig|6666666.67468.peg.1002 CDS gi|344044294|gb|AFYA01000013.1| 36923 36642 -2 - 282 FIG00544346: hypothetical protein - none -
fig|6666666.67468.peg.1003 CDS gi|344044294|gb|AFYA01000013.1| 36938 37348 2 + 411 FIG00547038: hypothetical protein - none -
fig|6666666.67468.peg.1004 CDS gi|344044294|gb|AFYA01000013.1| 38338 37376 -1 - 963 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.67468.peg.1005 CDS gi|344044294|gb|AFYA01000013.1| 38432 38725 2 + 294 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.1006 CDS gi|344044294|gb|AFYA01000013.1| 38768 39589 2 + 822 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.67468.peg.1007 CDS gi|344044294|gb|AFYA01000013.1| 39603 40637 3 + 1035 FIG00545003: hypothetical protein - none -
fig|6666666.67468.peg.1008 CDS gi|344044294|gb|AFYA01000013.1| 41624 41196 -2 - 429 FIG00547381: hypothetical protein - none -
fig|6666666.67468.peg.1009 CDS gi|344044294|gb|AFYA01000013.1| 42755 41946 -2 - 810 beta-lactamase class C - none -
fig|6666666.67468.peg.1010 CDS gi|344044294|gb|AFYA01000013.1| 43169 42837 -2 - 333 FIG00545682: hypothetical protein - none -
fig|6666666.67468.peg.1011 CDS gi|344044294|gb|AFYA01000013.1| 43511 43215 -2 - 297 FIG00548778: hypothetical protein - none -
fig|6666666.67468.peg.1012 CDS gi|344044294|gb|AFYA01000013.1| 43803 44612 3 + 810 hypothetical protein - none -
fig|6666666.67468.peg.1013 CDS gi|344044294|gb|AFYA01000013.1| 46108 44609 -1 - 1500 hypothetical protein - none -
fig|6666666.67468.peg.1014 CDS gi|344044294|gb|AFYA01000013.1| 46302 46646 3 + 345 FIG00549637: hypothetical protein - none -
fig|6666666.67468.peg.1015 CDS gi|344044294|gb|AFYA01000013.1| 46927 48477 1 + 1551 putative secreted alkaline phosphatase - none -
fig|6666666.67468.peg.1016 CDS gi|344044294|gb|AFYA01000013.1| 48883 50814 1 + 1932 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.67468.peg.1017 CDS gi|344044294|gb|AFYA01000013.1| 50870 51112 2 + 243 FIG00549194: hypothetical protein - none -
fig|6666666.67468.peg.1018 CDS gi|344044294|gb|AFYA01000013.1| 53015 51114 -2 - 1902 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.67468.peg.1019 CDS gi|344044294|gb|AFYA01000013.1| 53055 53549 3 + 495 putative ribonuclease - none -
fig|6666666.67468.peg.1020 CDS gi|344044294|gb|AFYA01000013.1| 53550 53795 3 + 246 FIG00546281: hypothetical protein - none -
fig|6666666.67468.peg.1021 CDS gi|344044294|gb|AFYA01000013.1| 55730 53853 -2 - 1878 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67468.peg.1022 CDS gi|344044294|gb|AFYA01000013.1| 56067 55894 -3 - 174 FIG00546343: hypothetical protein - none -
fig|6666666.67468.peg.1023 CDS gi|344044294|gb|AFYA01000013.1| 57990 56716 -3 - 1275 dNTP triphosphohydrolase, broad substrate specificity, subgroup 2 Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.67468.peg.1024 CDS gi|344044294|gb|AFYA01000013.1| 58018 58557 1 + 540 FIG00545306: hypothetical protein - none -
fig|6666666.67468.peg.1025 CDS gi|344044294|gb|AFYA01000013.1| 58710 60755 3 + 2046 FIG00543878: hypothetical protein - none -
fig|6666666.67468.peg.1026 CDS gi|344044294|gb|AFYA01000013.1| 61019 60873 -2 - 147 hypothetical protein - none -
fig|6666666.67468.peg.1027 CDS gi|344044294|gb|AFYA01000013.1| 61515 61027 -3 - 489 FIG00545596: hypothetical protein - none -
fig|6666666.67468.peg.1028 CDS gi|344044294|gb|AFYA01000013.1| 62112 61528 -3 - 585 FIG00544046: hypothetical protein - none -
fig|6666666.67468.peg.1029 CDS gi|344044294|gb|AFYA01000013.1| 63589 62204 -1 - 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67468.peg.1030 CDS gi|344044294|gb|AFYA01000013.1| 63831 64202 3 + 372 putative transcription regulator - none -
fig|6666666.67468.peg.1031 CDS gi|344044294|gb|AFYA01000013.1| 64368 64237 -3 - 132 hypothetical protein - none -
fig|6666666.67468.peg.1032 CDS gi|344044294|gb|AFYA01000013.1| 64243 64677 1 + 435 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.67468.peg.1033 CDS gi|344044354|gb|AFYA01000012.1| 172 2 -1 - 171 hypothetical protein - none -
fig|6666666.67468.peg.1034 CDS gi|344044354|gb|AFYA01000012.1| 2329 545 -1 - 1785 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67468.peg.1035 CDS gi|344044354|gb|AFYA01000012.1| 2423 3694 2 + 1272 Urea ABC transporter, substrate binding protein UrtA Urea decomposition
fig|6666666.67468.peg.1036 CDS gi|344044354|gb|AFYA01000012.1| 3707 4591 2 + 885 Urea ABC transporter, permease protein UrtB Urea decomposition
fig|6666666.67468.peg.1037 CDS gi|344044354|gb|AFYA01000012.1| 4588 5676 1 + 1089 Urea ABC transporter, permease protein UrtC Urea decomposition
fig|6666666.67468.peg.1038 CDS gi|344044354|gb|AFYA01000012.1| 5673 6401 3 + 729 Urea ABC transporter, ATPase protein UrtD Urea decomposition
fig|6666666.67468.peg.1039 CDS gi|344044354|gb|AFYA01000012.1| 6409 7110 1 + 702 Urea ABC transporter, ATPase protein UrtE Urea decomposition
fig|6666666.67468.peg.1040 CDS gi|344044354|gb|AFYA01000012.1| 7721 7107 -2 - 615 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67468.peg.1041 CDS gi|344044354|gb|AFYA01000012.1| 7751 8776 2 + 1026 2-nitropropane dioxygenase (EC 1.13.11.32) - none -
fig|6666666.67468.peg.1042 CDS gi|344044354|gb|AFYA01000012.1| 8868 10310 3 + 1443 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67468.peg.1043 CDS gi|344044354|gb|AFYA01000012.1| 11138 10536 -2 - 603 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67468.peg.1044 CDS gi|344044354|gb|AFYA01000012.1| 11826 11218 -3 - 609 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67468.peg.1045 CDS gi|344044354|gb|AFYA01000012.1| 12102 12533 3 + 432 FIG00548743: hypothetical protein - none -
fig|6666666.67468.peg.1046 CDS gi|344044354|gb|AFYA01000012.1| 13156 12530 -1 - 627 FIG00545789: hypothetical protein - none -
fig|6666666.67468.peg.1047 CDS gi|344044354|gb|AFYA01000012.1| 14140 13163 -1 - 978 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67468.peg.1048 CDS gi|344044354|gb|AFYA01000012.1| 15609 14152 -3 - 1458 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67468.peg.1049 CDS gi|344044354|gb|AFYA01000012.1| 16942 15713 -1 - 1230 Putative membrane protein - none -
fig|6666666.67468.peg.1050 CDS gi|344044354|gb|AFYA01000012.1| 16941 17129 3 + 189 hypothetical protein - none -
fig|6666666.67468.peg.1051 CDS gi|344044354|gb|AFYA01000012.1| 17206 18567 1 + 1362 Multicopper oxidase Copper homeostasis
fig|6666666.67468.peg.1052 CDS gi|344044354|gb|AFYA01000012.1| 18713 19633 2 + 921 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1053 CDS gi|344044354|gb|AFYA01000012.1| 19653 20486 3 + 834 integral membrane protein - none -
fig|6666666.67468.peg.1054 CDS gi|344044354|gb|AFYA01000012.1| 20529 21788 3 + 1260 sensor histidine kinase - none -
fig|6666666.67468.peg.1055 CDS gi|344044354|gb|AFYA01000012.1| 21789 22400 3 + 612 putative two-component response regulator - none -
fig|6666666.67468.peg.1056 CDS gi|344044354|gb|AFYA01000012.1| 22565 22431 -2 - 135 Hypothetical protein - none -
fig|6666666.67468.peg.1057 CDS gi|344044354|gb|AFYA01000012.1| 22749 23855 3 + 1107 Inner membrane protein YihY, formerly thought to be RNase BN CBSS-342610.3.peg.283;
LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1058 CDS gi|344044354|gb|AFYA01000012.1| 24353 24231 -2 - 123 hypothetical protein - none -
fig|6666666.67468.peg.1059 CDS gi|344044354|gb|AFYA01000012.1| 24364 25764 1 + 1401 FIG00547058: hypothetical protein - none -
fig|6666666.67468.peg.1060 CDS gi|344044354|gb|AFYA01000012.1| 25901 27493 2 + 1593 ABC-type transport system TetB - none -
fig|6666666.67468.peg.1061 CDS gi|344044354|gb|AFYA01000012.1| 29467 27494 -1 - 1974 Gamma-glutamyltranspeptidase (EC 2.3.2.2) - none -
fig|6666666.67468.peg.1062 CDS gi|344044354|gb|AFYA01000012.1| 29716 29967 1 + 252 FIG00546314: hypothetical protein - none -
fig|6666666.67468.peg.1063 CDS gi|344044354|gb|AFYA01000012.1| 30456 30040 -3 - 417 hypothetical protein - none -
fig|6666666.67468.peg.1064 CDS gi|344044354|gb|AFYA01000012.1| 30898 31536 1 + 639 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.1065 CDS gi|344044354|gb|AFYA01000012.1| 31533 35186 3 + 3654 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67468.peg.1066 CDS gi|344044354|gb|AFYA01000012.1| 37133 35163 -2 - 1971 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.67468.peg.1067 CDS gi|344044354|gb|AFYA01000012.1| 38863 37130 -1 - 1734 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.67468.peg.1068 CDS gi|344044354|gb|AFYA01000012.1| 41467 38969 -1 - 2499 FIG00547943: hypothetical protein - none -
fig|6666666.67468.peg.1069 CDS gi|344044354|gb|AFYA01000012.1| 42750 41470 -3 - 1281 FIG00547422: hypothetical protein - none -
fig|6666666.67468.peg.1070 CDS gi|344044354|gb|AFYA01000012.1| 44351 42846 -2 - 1506 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Polyamine Metabolism
fig|6666666.67468.peg.1071 CDS gi|344044354|gb|AFYA01000012.1| 44452 44664 1 + 213 hypothetical protein - none -
fig|6666666.67468.peg.1072 CDS gi|344044354|gb|AFYA01000012.1| 44676 45263 3 + 588 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67468.peg.1073 CDS gi|344044354|gb|AFYA01000012.1| 45608 45237 -2 - 372 FIG01255897: hypothetical protein - none -
fig|6666666.67468.peg.1074 CDS gi|344044354|gb|AFYA01000012.1| 46126 45746 -1 - 381 FIG00547647: hypothetical protein - none -
fig|6666666.67468.peg.1075 CDS gi|344044354|gb|AFYA01000012.1| 46458 47222 3 + 765 FIG00545464: hypothetical protein - none -
fig|6666666.67468.peg.1076 CDS gi|344044354|gb|AFYA01000012.1| 47429 48706 2 + 1278 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.67468.peg.1077 CDS gi|344044354|gb|AFYA01000012.1| 48796 49338 1 + 543 Putative membrane protein - none -
fig|6666666.67468.peg.1078 CDS gi|344044354|gb|AFYA01000012.1| 49380 49928 3 + 549 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67468.peg.1079 CDS gi|344044354|gb|AFYA01000012.1| 49928 50893 2 + 966 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67468.peg.1080 CDS gi|344044354|gb|AFYA01000012.1| 51322 51510 1 + 189 hypothetical protein - none -
fig|6666666.67468.peg.1081 CDS gi|344044354|gb|AFYA01000012.1| 51629 51799 2 + 171 hypothetical protein - none -
fig|6666666.67468.peg.1082 CDS gi|344044354|gb|AFYA01000012.1| 51957 52952 3 + 996 Transcriptional regulator, AraC family - none -
fig|6666666.67468.peg.1083 CDS gi|344044354|gb|AFYA01000012.1| 53060 53878 2 + 819 FIG00543890: hypothetical protein - none -
fig|6666666.67468.peg.1084 CDS gi|344044354|gb|AFYA01000012.1| 54755 54303 -2 - 453 FIG00545488: hypothetical protein - none -
fig|6666666.67468.peg.1085 CDS gi|344044354|gb|AFYA01000012.1| 55303 54779 -1 - 525 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67468.peg.1086 CDS gi|344044354|gb|AFYA01000012.1| 55967 55482 -2 - 486 FIG00544319: hypothetical protein - none -
fig|6666666.67468.peg.1087 CDS gi|344044354|gb|AFYA01000012.1| 56184 57041 3 + 858 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67468.peg.1088 CDS gi|344044354|gb|AFYA01000012.1| 57081 57401 3 + 321 FIG00543949: hypothetical protein - none -
fig|6666666.67468.peg.1089 CDS gi|344044354|gb|AFYA01000012.1| 57619 58719 1 + 1101 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.1090 CDS gi|344044354|gb|AFYA01000012.1| 58773 59513 3 + 741 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67468.peg.1091 CDS gi|344044354|gb|AFYA01000012.1| 59534 60055 2 + 522 FIG00544436: hypothetical protein - none -
fig|6666666.67468.peg.1092 CDS gi|344044354|gb|AFYA01000012.1| 60392 60279 -2 - 114 hypothetical protein - none -
fig|6666666.67468.peg.1093 CDS gi|344044354|gb|AFYA01000012.1| 61417 60431 -1 - 987 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67468.peg.1094 CDS gi|344044354|gb|AFYA01000012.1| 61631 62935 2 + 1305 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.67468.peg.1095 CDS gi|344044354|gb|AFYA01000012.1| 63028 64890 1 + 1863 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67468.peg.1096 CDS gi|344044354|gb|AFYA01000012.1| 64887 65612 3 + 726 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67468.peg.1097 CDS gi|344044354|gb|AFYA01000012.1| 65994 65644 -3 - 351 FIG00546727: hypothetical protein - none -
fig|6666666.67468.peg.1098 CDS gi|344044354|gb|AFYA01000012.1| 66058 66732 1 + 675 putative LysR-family transcriptional regulator - none -
fig|6666666.67468.peg.1099 CDS gi|344044354|gb|AFYA01000012.1| 66790 67320 1 + 531 sortase or related acyltransferase - none -
fig|6666666.67468.peg.1100 CDS gi|344044354|gb|AFYA01000012.1| 68207 67326 -2 - 882 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) CBSS-279010.5.peg.587;
EC699-706
fig|6666666.67468.peg.1101 CDS gi|344044354|gb|AFYA01000012.1| 68857 68204 -1 - 654 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) CBSS-279010.5.peg.587;
EC699-706
fig|6666666.67468.peg.1102 CDS gi|344044354|gb|AFYA01000012.1| 69605 68847 -2 - 759 Lactam utilization protein LamB CBSS-279010.5.peg.587;
EC699-706
fig|6666666.67468.peg.1103 CDS gi|344044354|gb|AFYA01000012.1| 70938 69628 -3 - 1311 FIG00545033: hypothetical protein - none -
fig|6666666.67468.peg.1104 CDS gi|344044354|gb|AFYA01000012.1| 71149 71802 1 + 654 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.1105 CDS gi|344044354|gb|AFYA01000012.1| 71912 73156 2 + 1245 FIG00546478: hypothetical protein - none -
fig|6666666.67468.peg.1106 CDS gi|344044354|gb|AFYA01000012.1| 74624 73215 -2 - 1410 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67468.peg.1107 CDS gi|344044354|gb|AFYA01000012.1| 74943 75434 3 + 492 FIG00545221: hypothetical protein - none -
fig|6666666.67468.peg.1108 CDS gi|344044354|gb|AFYA01000012.1| 75745 75482 -1 - 264 hypothetical protein - none -
fig|6666666.67468.peg.1109 CDS gi|344044354|gb|AFYA01000012.1| 76191 75742 -3 - 450 hypothetical protein - none -
fig|6666666.67468.peg.1110 CDS gi|344044354|gb|AFYA01000012.1| 76870 76304 -1 - 567 putative reductase - none -
fig|6666666.67468.peg.1111 CDS gi|344044354|gb|AFYA01000012.1| 78055 77048 -1 - 1008 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.1112 CDS gi|344044354|gb|AFYA01000012.1| 78290 78820 2 + 531 FIG00545451: hypothetical protein - none -
fig|6666666.67468.peg.1113 CDS gi|344044354|gb|AFYA01000012.1| 80066 78906 -2 - 1161 hypothetical protein - none -
fig|6666666.67468.peg.1114 CDS gi|344044354|gb|AFYA01000012.1| 80168 80647 2 + 480 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.1115 CDS gi|344044354|gb|AFYA01000012.1| 80912 80667 -2 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67468.peg.1116 CDS gi|344044354|gb|AFYA01000012.1| 82186 80933 -1 - 1254 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67468.peg.1117 CDS gi|344044354|gb|AFYA01000012.1| 82282 83277 1 + 996 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67468.peg.1118 CDS gi|344044354|gb|AFYA01000012.1| 84017 83319 -2 - 699 FIG00544176: hypothetical protein - none -
fig|6666666.67468.peg.1119 CDS gi|344044354|gb|AFYA01000012.1| 85492 84221 -1 - 1272 FIG00546199: hypothetical protein - none -
fig|6666666.67468.peg.1120 CDS gi|344044354|gb|AFYA01000012.1| 85968 85786 -3 - 183 FIG00547082: hypothetical protein - none -
fig|6666666.67468.peg.1121 CDS gi|344044354|gb|AFYA01000012.1| 87663 85972 -3 - 1692 Sodium-dependent transporter - none -
fig|6666666.67468.peg.1122 CDS gi|344044354|gb|AFYA01000012.1| 89186 87951 -2 - 1236 putative PS1 protein - none -
fig|6666666.67468.peg.1123 CDS gi|344044354|gb|AFYA01000012.1| 89383 90468 1 + 1086 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.67468.peg.1124 CDS gi|344044354|gb|AFYA01000012.1| 91319 90486 -2 - 834 short-chain dehydrogenase/oxidoreductase - none -
fig|6666666.67468.peg.1125 CDS gi|344044354|gb|AFYA01000012.1| 91404 91967 3 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.1126 CDS gi|344044354|gb|AFYA01000012.1| 92383 92658 1 + 276 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67468.peg.1127 CDS gi|344044354|gb|AFYA01000012.1| 93061 93402 1 + 342 hypothetical protein - none -
fig|6666666.67468.peg.1128 CDS gi|344044354|gb|AFYA01000012.1| 93566 93700 2 + 135 hypothetical protein - none -
fig|6666666.67468.peg.1129 CDS gi|344044354|gb|AFYA01000012.1| 94084 94326 1 + 243 hypothetical protein - none -
fig|6666666.67468.peg.1130 CDS gi|344044354|gb|AFYA01000012.1| 94651 97695 1 + 3045 FIG00546890: hypothetical protein - none -
fig|6666666.67468.peg.1131 CDS gi|344044354|gb|AFYA01000012.1| 97703 99172 2 + 1470 hypothetical protein - none -
fig|6666666.67468.peg.1132 CDS gi|344044354|gb|AFYA01000012.1| 99169 99390 1 + 222 hypothetical protein - none -
fig|6666666.67468.peg.1133 CDS gi|344044354|gb|AFYA01000012.1| 99527 99889 2 + 363 hypothetical protein - none -
fig|6666666.67468.peg.1134 CDS gi|344044354|gb|AFYA01000012.1| 99943 100107 1 + 165 hypothetical protein - none -
fig|6666666.67468.peg.1135 CDS gi|344044354|gb|AFYA01000012.1| 100543 101226 1 + 684 hypothetical protein - none -
fig|6666666.67468.peg.1136 CDS gi|344044354|gb|AFYA01000012.1| 101285 101725 2 + 441 FIG00544626: hypothetical protein - none -
fig|6666666.67468.peg.1137 CDS gi|344044354|gb|AFYA01000012.1| 102144 101722 -3 - 423 Lactoylglutathione lyase and related lyases - none -
fig|6666666.67468.peg.1138 CDS gi|344044354|gb|AFYA01000012.1| 102284 102748 2 + 465 MutT/nudix family protein - none -
fig|6666666.67468.peg.1139 CDS gi|344044354|gb|AFYA01000012.1| 102914 102798 -2 - 117 hypothetical protein - none -
fig|6666666.67468.peg.1140 CDS gi|344044354|gb|AFYA01000012.1| 103374 103868 3 + 495 hypothetical protein - none -
fig|6666666.67468.peg.1141 CDS gi|344044354|gb|AFYA01000012.1| 103957 104463 1 + 507 Hemerythrin HHE cation binding domain protein - none -
fig|6666666.67468.peg.1142 CDS gi|344044354|gb|AFYA01000012.1| 105798 104494 -3 - 1305 drug resistance transporter, Bcr/CflA family - none -
fig|6666666.67468.peg.1143 CDS gi|344044354|gb|AFYA01000012.1| 105889 106350 1 + 462 hypothetical protein - none -
fig|6666666.67468.peg.1144 CDS gi|344044354|gb|AFYA01000012.1| 106426 106653 1 + 228 hypothetical protein - none -
fig|6666666.67468.peg.1145 CDS gi|344044354|gb|AFYA01000012.1| 106710 107201 3 + 492 protein of unknown function DUF1130 - none -
fig|6666666.67468.peg.1146 CDS gi|344044354|gb|AFYA01000012.1| 107997 107242 -3 - 756 predicted nucleoside-diphosphate-sugar epimerase - none -
fig|6666666.67468.peg.1147 CDS gi|344044354|gb|AFYA01000012.1| 108189 109886 3 + 1698 Sulfate transporter - none -
fig|6666666.67468.peg.1148 CDS gi|344044354|gb|AFYA01000012.1| 110256 110092 -3 - 165 hypothetical protein - none -
fig|6666666.67468.peg.1149 CDS gi|344044354|gb|AFYA01000012.1| 112432 110474 -1 - 1959 FIG019045: long form Mg-chelase associated protein with vWA domain CBSS-336982.3.peg.1011
fig|6666666.67468.peg.1150 CDS gi|344044354|gb|AFYA01000012.1| 113830 112457 -1 - 1374 Magnesium chelatase, subunit ChlI (EC 6.6.1.1) CBSS-336982.3.peg.1011
fig|6666666.67468.peg.1151 CDS gi|344044354|gb|AFYA01000012.1| 113876 114577 2 + 702 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67468.peg.1152 CDS gi|344044354|gb|AFYA01000012.1| 114574 115281 1 + 708 FIG00549881: hypothetical protein - none -
fig|6666666.67468.peg.1153 CDS gi|344044354|gb|AFYA01000012.1| 115366 116130 1 + 765 FIG00547971: hypothetical protein - none -
fig|6666666.67468.peg.1154 CDS gi|344044354|gb|AFYA01000012.1| 116165 117808 2 + 1644 ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1155 CDS gi|344044354|gb|AFYA01000012.1| 118193 117795 -2 - 399 FIG00544985: hypothetical protein - none -
fig|6666666.67468.peg.1156 CDS gi|344044354|gb|AFYA01000012.1| 118340 118606 2 + 267 Alkylphosphonate utilization operon protein PhnA Alkylphosphonate utilization
fig|6666666.67468.peg.1157 CDS gi|344044354|gb|AFYA01000012.1| 119330 118854 -2 - 477 FIG00547585: hypothetical protein - none -
fig|6666666.67468.peg.1158 CDS gi|344044480|gb|AFYA01000011.1| 538 35 -1 - 504 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.67468.peg.1159 CDS gi|344044480|gb|AFYA01000011.1| 2797 692 -1 - 2106 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.67468.peg.1160 CDS gi|344044480|gb|AFYA01000011.1| 4267 2891 -1 - 1377 D-mannonate oxidoreductase (EC 1.1.1.57) - none -
fig|6666666.67468.peg.1161 CDS gi|344044480|gb|AFYA01000011.1| 5682 4264 -3 - 1419 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.67468.peg.1162 CDS gi|344044480|gb|AFYA01000011.1| 6880 5753 -1 - 1128 transcriptional regulator - none -
fig|6666666.67468.peg.1163 CDS gi|344044480|gb|AFYA01000011.1| 6925 8166 1 + 1242 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67468.peg.1164 CDS gi|344044480|gb|AFYA01000011.1| 8340 8849 3 + 510 FIG00546362: hypothetical protein - none -
fig|6666666.67468.peg.1165 CDS gi|344044480|gb|AFYA01000011.1| 9055 8846 -1 - 210 hypothetical membrane protein - none -
fig|6666666.67468.peg.1166 CDS gi|344044480|gb|AFYA01000011.1| 9295 9107 -1 - 189 FIG00547718: hypothetical protein - none -
fig|6666666.67468.peg.1167 CDS gi|344044480|gb|AFYA01000011.1| 9810 12107 3 + 2298 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67468.peg.1168 CDS gi|344044480|gb|AFYA01000011.1| 12764 12117 -2 - 648 FIG00549195: hypothetical protein - none -
fig|6666666.67468.peg.1169 CDS gi|344044480|gb|AFYA01000011.1| 13544 14755 2 + 1212 putative lipoprotein - none -
fig|6666666.67468.peg.1170 CDS gi|344044480|gb|AFYA01000011.1| 14942 16186 2 + 1245 FIG00549904: hypothetical protein - none -
fig|6666666.67468.peg.1171 CDS gi|344044480|gb|AFYA01000011.1| 16842 16183 -3 - 660 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67468.peg.1172 CDS gi|344044480|gb|AFYA01000011.1| 17652 16852 -3 - 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.67468.peg.1173 CDS gi|344044480|gb|AFYA01000011.1| 18478 17726 -1 - 753 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.67468.peg.1174 CDS gi|344044480|gb|AFYA01000011.1| 18604 19797 1 + 1194 FIG00544673: hypothetical protein - none -
fig|6666666.67468.peg.1175 CDS gi|344044480|gb|AFYA01000011.1| 21010 20318 -1 - 693 Circadian phase modifier - none -
fig|6666666.67468.peg.1176 CDS gi|344044480|gb|AFYA01000011.1| 21867 21013 -3 - 855 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.67468.peg.1177 CDS gi|344044480|gb|AFYA01000011.1| 23228 21900 -2 - 1329 hypothetical protein - none -
fig|6666666.67468.peg.1178 CDS gi|344044480|gb|AFYA01000011.1| 23848 23291 -1 - 558 hypothetical protein - none -
fig|6666666.67468.peg.1179 CDS gi|344044480|gb|AFYA01000011.1| 23990 25033 2 + 1044 Luciferase-like monooxygenase (EC 1.14.-.-) - none -
fig|6666666.67468.peg.1180 CDS gi|344044480|gb|AFYA01000011.1| 25059 25685 3 + 627 Amidases related to nicotinamidase NAD and NADP cofactor biosynthesis global
fig|6666666.67468.peg.1181 CDS gi|344044480|gb|AFYA01000011.1| 26010 25879 -3 - 132 hypothetical protein - none -
fig|6666666.67468.peg.1182 CDS gi|344044480|gb|AFYA01000011.1| 26009 26137 2 + 129 hypothetical protein - none -
fig|6666666.67468.peg.1183 CDS gi|344044480|gb|AFYA01000011.1| 26778 28268 3 + 1491 hypothetical protein - none -
fig|6666666.67468.peg.1184 CDS gi|344044480|gb|AFYA01000011.1| 29541 28441 -3 - 1101 Circadian phase modifier - none -
fig|6666666.67468.peg.1185 CDS gi|344044480|gb|AFYA01000011.1| 30199 29573 -1 - 627 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.1186 CDS gi|344044480|gb|AFYA01000011.1| 30542 30721 2 + 180 Transcriptional regulator, AraC family - none -
fig|6666666.67468.peg.1187 CDS gi|344044480|gb|AFYA01000011.1| 31050 32180 3 + 1131 ATP binding protein of ABC transporter for sugars - none -
fig|6666666.67468.peg.1188 CDS gi|344044480|gb|AFYA01000011.1| 32263 33507 1 + 1245 Chromosome segregation ATPases - none -
fig|6666666.67468.peg.1189 CDS gi|344044480|gb|AFYA01000011.1| 33802 33689 -1 - 114 hypothetical protein - none -
fig|6666666.67468.peg.1190 CDS gi|344044480|gb|AFYA01000011.1| 33872 35203 2 + 1332 FIG00545076: hypothetical protein - none -
fig|6666666.67468.peg.1191 CDS gi|344044480|gb|AFYA01000011.1| 35393 36238 2 + 846 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF - none -
fig|6666666.67468.peg.1192 CDS gi|344044480|gb|AFYA01000011.1| 36323 37156 2 + 834 Multiple sugar ABC transporter, membrane-spanning permease protein MsmG - none -
fig|6666666.67468.peg.1193 CDS gi|344044480|gb|AFYA01000011.1| 37179 37820 3 + 642 hypothetical membrane protein - none -
fig|6666666.67468.peg.1194 CDS gi|344044480|gb|AFYA01000011.1| 38075 37923 -2 - 153 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67468.peg.1195 CDS gi|344044480|gb|AFYA01000011.1| 40089 38668 -3 - 1422 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.67468.peg.1196 CDS gi|344044480|gb|AFYA01000011.1| 40738 42891 1 + 2154 Copper resistance protein D Copper homeostasis
fig|6666666.67468.peg.1197 CDS gi|344044480|gb|AFYA01000011.1| 43067 43684 2 + 618 putative single-strand DNA binding protein - none -
fig|6666666.67468.peg.1198 CDS gi|344044480|gb|AFYA01000011.1| 43835 45505 2 + 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1199 CDS gi|344044480|gb|AFYA01000011.1| 45904 46371 1 + 468 hypothetical protein - none -
fig|6666666.67468.peg.1200 CDS gi|344044480|gb|AFYA01000011.1| 46495 46962 1 + 468 FIG00544139: hypothetical protein - none -
fig|6666666.67468.peg.1201 CDS gi|344044480|gb|AFYA01000011.1| 46962 47591 3 + 630 FIG00545013: hypothetical protein - none -
fig|6666666.67468.peg.1202 CDS gi|344044480|gb|AFYA01000011.1| 48718 47588 -1 - 1131 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.67468.peg.1203 CDS gi|344044480|gb|AFYA01000011.1| 49154 48759 -2 - 396 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67468.peg.1204 CDS gi|344044480|gb|AFYA01000011.1| 50191 49187 -1 - 1005 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67468.peg.1205 CDS gi|344044480|gb|AFYA01000011.1| 50234 51019 2 + 786 ABC-type transporter, ATPase component - none -
fig|6666666.67468.peg.1206 CDS gi|344044480|gb|AFYA01000011.1| 51159 52319 3 + 1161 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.67468.peg.1207 CDS gi|344044480|gb|AFYA01000011.1| 53048 52323 -2 - 726 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.1208 CDS gi|344044480|gb|AFYA01000011.1| 53195 53905 2 + 711 putative oxidoreductase - none -
fig|6666666.67468.peg.1209 CDS gi|344044480|gb|AFYA01000011.1| 54639 53902 -3 - 738 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67468.peg.1210 CDS gi|344044480|gb|AFYA01000011.1| 55264 55112 -1 - 153 hypothetical protein - none -
fig|6666666.67468.peg.1211 CDS gi|344044480|gb|AFYA01000011.1| 56079 55963 -3 - 117 hypothetical protein - none -
fig|6666666.67468.peg.1212 CDS gi|344044480|gb|AFYA01000011.1| 56089 58062 1 + 1974 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67468.peg.1213 CDS gi|344044480|gb|AFYA01000011.1| 58295 58411 2 + 117 hypothetical protein - none -
fig|6666666.67468.peg.1214 CDS gi|344044480|gb|AFYA01000011.1| 58429 58761 1 + 333 DUF1541 domain-containing protein - none -
fig|6666666.67468.peg.1215 CDS gi|344044480|gb|AFYA01000011.1| 60141 58771 -3 - 1371 PLP-dependent aminotransferase - none -
fig|6666666.67468.peg.1216 CDS gi|344044480|gb|AFYA01000011.1| 62136 60193 -3 - 1944 FIG00544299: hypothetical protein - none -
fig|6666666.67468.peg.1217 CDS gi|344044480|gb|AFYA01000011.1| 62283 63992 3 + 1710 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.67468.peg.1218 CDS gi|344044480|gb|AFYA01000011.1| 63993 64934 3 + 942 putative transport protein - none -
fig|6666666.67468.peg.1219 CDS gi|344044480|gb|AFYA01000011.1| 64973 65824 2 + 852 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67468.peg.1220 CDS gi|344044480|gb|AFYA01000011.1| 65828 67471 2 + 1644 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1221 CDS gi|344044480|gb|AFYA01000011.1| 67487 68722 2 + 1236 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.67468.peg.1222 CDS gi|344044480|gb|AFYA01000011.1| 68819 69925 2 + 1107 permease of the major facilitator superfamily - none -
fig|6666666.67468.peg.1223 CDS gi|344044480|gb|AFYA01000011.1| 69988 70113 1 + 126 hypothetical protein - none -
fig|6666666.67468.peg.1224 CDS gi|344044480|gb|AFYA01000011.1| 70414 70626 1 + 213 Phytoene dehydrogenase and related proteins Carotenoids
fig|6666666.67468.peg.1225 CDS gi|344044480|gb|AFYA01000011.1| 71866 70895 -1 - 972 hypothetical protein - none -
fig|6666666.67468.peg.1226 CDS gi|344044480|gb|AFYA01000011.1| 72641 71883 -2 - 759 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.1227 CDS gi|344044480|gb|AFYA01000011.1| 73497 72673 -3 - 825 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.1228 CDS gi|344044480|gb|AFYA01000011.1| 75047 73566 -2 - 1482 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.1229 CDS gi|344044480|gb|AFYA01000011.1| 76220 75096 -2 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.67468.peg.1230 CDS gi|344044480|gb|AFYA01000011.1| 77752 76253 -1 - 1500 Cyclohexanone monooxygenase (EC 1.14.13.22) - none -
fig|6666666.67468.peg.1231 CDS gi|344044480|gb|AFYA01000011.1| 78638 77784 -2 - 855 putative 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase - none -
fig|6666666.67468.peg.1232 CDS gi|344044480|gb|AFYA01000011.1| 80057 78666 -2 - 1392 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67468.peg.1233 CDS gi|344044480|gb|AFYA01000011.1| 80486 81268 2 + 783 regulatory proteins, IclR - none -
fig|6666666.67468.peg.1234 CDS gi|344044480|gb|AFYA01000011.1| 81353 81529 2 + 177 hypothetical protein - none -
fig|6666666.67468.peg.1235 CDS gi|344044480|gb|AFYA01000011.1| 81548 82477 2 + 930 Mobile element protein - none -
fig|6666666.67468.peg.1236 CDS gi|344044480|gb|AFYA01000011.1| 85864 83261 -1 - 2604 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67468.peg.1237 CDS gi|344044480|gb|AFYA01000011.1| 85978 86589 1 + 612 FIG00544229: hypothetical protein - none -
fig|6666666.67468.peg.1238 CDS gi|344044480|gb|AFYA01000011.1| 87208 87651 1 + 444 uncharacterized membrane protein - none -
fig|6666666.67468.peg.1239 CDS gi|344044480|gb|AFYA01000011.1| 87796 88269 1 + 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.67468.peg.1240 CDS gi|344044480|gb|AFYA01000011.1| 89187 88348 -3 - 840 FIG00997919: hypothetical protein - none -
fig|6666666.67468.peg.1241 CDS gi|344044480|gb|AFYA01000011.1| 89369 89713 2 + 345 Mobile element protein - none -
fig|6666666.67468.peg.1242 CDS gi|344044480|gb|AFYA01000011.1| 89892 90167 3 + 276 FIG00545657: hypothetical protein - none -
fig|6666666.67468.peg.1243 CDS gi|344044480|gb|AFYA01000011.1| 90239 90490 2 + 252 FIG00548268: hypothetical protein - none -
fig|6666666.67468.peg.1244 CDS gi|344044480|gb|AFYA01000011.1| 90893 90642 -2 - 252 FIG00544802: hypothetical protein - none -
fig|6666666.67468.peg.1245 CDS gi|344044480|gb|AFYA01000011.1| 92856 91873 -3 - 984 FIG00544783: hypothetical protein - none -
fig|6666666.67468.peg.1246 CDS gi|344044480|gb|AFYA01000011.1| 93398 92901 -2 - 498 hypothetical protein - none -
fig|6666666.67468.peg.1247 CDS gi|344044480|gb|AFYA01000011.1| 93897 95246 3 + 1350 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67468.peg.1248 CDS gi|344044480|gb|AFYA01000011.1| 95436 95314 -3 - 123 hypothetical protein - none -
fig|6666666.67468.peg.1249 CDS gi|344044480|gb|AFYA01000011.1| 95435 96028 2 + 594 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67468.peg.1250 CDS gi|344044480|gb|AFYA01000011.1| 96063 96689 3 + 627 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67468.peg.1251 CDS gi|344044480|gb|AFYA01000011.1| 98068 96752 -1 - 1317 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.67468.peg.1252 CDS gi|344044480|gb|AFYA01000011.1| 98659 98072 -1 - 588 hypothetical protein - none -
fig|6666666.67468.peg.1253 CDS gi|344044480|gb|AFYA01000011.1| 99579 98656 -3 - 924 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.67468.peg.1254 CDS gi|344044480|gb|AFYA01000011.1| 100508 99963 -2 - 546 Succinyl-CoA synthetase, alpha subunit - none -
fig|6666666.67468.peg.1255 CDS gi|344044480|gb|AFYA01000011.1| 101708 100530 -2 - 1179 NADH-FMN oxidoreductase - none -
fig|6666666.67468.peg.1256 CDS gi|344044480|gb|AFYA01000011.1| 103170 101728 -3 - 1443 hypothetical protein - none -
fig|6666666.67468.peg.1257 CDS gi|344044480|gb|AFYA01000011.1| 103402 104739 1 + 1338 putative amidase - none -
fig|6666666.67468.peg.1258 CDS gi|344044480|gb|AFYA01000011.1| 104733 105026 3 + 294 hypothetical protein - none -
fig|6666666.67468.peg.1259 CDS gi|344044480|gb|AFYA01000011.1| 105262 105696 1 + 435 Two-component response regulator - none -
fig|6666666.67468.peg.1260 CDS gi|344044480|gb|AFYA01000011.1| 107040 106099 -3 - 942 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) Anaerobic respiratory reductases;
Anaerobic respiratory reductases
fig|6666666.67468.peg.1261 CDS gi|344044480|gb|AFYA01000011.1| 107832 107083 -3 - 750 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.1262 CDS gi|344044480|gb|AFYA01000011.1| 108381 107857 -3 - 525 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-) Dioxygenases (EC 1.14.12.-)
fig|6666666.67468.peg.1263 CDS gi|344044480|gb|AFYA01000011.1| 109651 108374 -1 - 1278 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) Dioxygenases (EC 1.14.12.-)
fig|6666666.67468.peg.1264 CDS gi|344044480|gb|AFYA01000011.1| 110038 109676 -1 - 363 FIG01001988: hypothetical protein - none -
fig|6666666.67468.peg.1265 CDS gi|344044480|gb|AFYA01000011.1| 111235 110066 -1 - 1170 Pigment protein - none -
fig|6666666.67468.peg.1266 CDS gi|344044480|gb|AFYA01000011.1| 111484 112959 1 + 1476 two-component hybrid sensor and regulator - none -
fig|6666666.67468.peg.1267 CDS gi|344044480|gb|AFYA01000011.1| 114204 112960 -3 - 1245 Benzoate transport protein Benzoate degradation
fig|6666666.67468.peg.1268 CDS gi|344044480|gb|AFYA01000011.1| 115625 114285 -2 - 1341 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.67468.peg.1269 CDS gi|344044480|gb|AFYA01000011.1| 118459 115772 -1 - 2688 probable transcriptional regulator - none -
fig|6666666.67468.peg.1270 CDS gi|344044480|gb|AFYA01000011.1| 119362 118532 -1 - 831 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) Benzoate degradation
fig|6666666.67468.peg.1271 CDS gi|344044480|gb|AFYA01000011.1| 120897 119359 -3 - 1539 benzoate dioxygenase, ferredoxin reductase component - none -
fig|6666666.67468.peg.1272 CDS gi|344044480|gb|AFYA01000011.1| 121403 120909 -2 - 495 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.67468.peg.1273 CDS gi|344044480|gb|AFYA01000011.1| 122936 121443 -2 - 1494 Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) Benzoate degradation;
Dioxygenases (EC 1.14.12.-)
fig|6666666.67468.peg.1274 CDS gi|344044480|gb|AFYA01000011.1| 123354 124211 3 + 858 Catechol 1,2-dioxygenase (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1275 CDS gi|344044480|gb|AFYA01000011.1| 124252 125415 1 + 1164 Muconate cycloisomerase (EC 5.5.1.1) Catechol branch of beta-ketoadipate pathway;
Muconate lactonizing enzyme family
fig|6666666.67468.peg.1276 CDS gi|344044480|gb|AFYA01000011.1| 125428 125721 1 + 294 Muconolactone isomerase (EC 5.3.3.4) Catechol branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1277 CDS gi|344044480|gb|AFYA01000011.1| 125886 127046 3 + 1161 FIG00547611: hypothetical protein - none -
fig|6666666.67468.peg.1278 CDS gi|344044480|gb|AFYA01000011.1| 127206 127898 3 + 693 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1279 CDS gi|344044480|gb|AFYA01000011.1| 127910 128524 2 + 615 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1280 CDS gi|344044480|gb|AFYA01000011.1| 128616 129617 3 + 1002 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1281 CDS gi|344044480|gb|AFYA01000011.1| 129617 129985 2 + 369 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1282 CDS gi|344044480|gb|AFYA01000011.1| 132001 129971 -1 - 2031 DNA-binding HTH domain-containing protein - none -
fig|6666666.67468.peg.1283 CDS gi|344044480|gb|AFYA01000011.1| 132800 132045 -2 - 756 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1284 CDS gi|344044480|gb|AFYA01000011.1| 134029 132803 -1 - 1227 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) - none -
fig|6666666.67468.peg.1285 CDS gi|344044480|gb|AFYA01000011.1| 134812 134045 -1 - 768 Pca regulon regulatory protein PcaR Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1286 CDS gi|344044480|gb|AFYA01000011.1| 134886 135629 3 + 744 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1287 CDS gi|344044480|gb|AFYA01000011.1| 135650 136264 2 + 615 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.1288 CDS gi|344044480|gb|AFYA01000011.1| 137339 136251 -2 - 1089 FIG00547076: hypothetical protein - none -
fig|6666666.67468.peg.1289 CDS gi|344044480|gb|AFYA01000011.1| 137469 138749 3 + 1281 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67468.peg.1290 CDS gi|344044480|gb|AFYA01000011.1| 138750 139682 3 + 933 Auxin Efflux Carrier - none -
fig|6666666.67468.peg.1291 CDS gi|344044480|gb|AFYA01000011.1| 141008 139668 -2 - 1341 vannilate transporter VanK - none -
fig|6666666.67468.peg.1292 CDS gi|344044480|gb|AFYA01000011.1| 141997 141020 -1 - 978 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) Anaerobic respiratory reductases;
Anaerobic respiratory reductases
fig|6666666.67468.peg.1293 CDS gi|344044480|gb|AFYA01000011.1| 143131 142001 -1 - 1131 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) - none -
fig|6666666.67468.peg.1294 CDS gi|344044480|gb|AFYA01000011.1| 143399 143893 2 + 495 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67468.peg.1295 CDS gi|344044480|gb|AFYA01000011.1| 144669 143890 -3 - 780 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.1296 CDS gi|344044480|gb|AFYA01000011.1| 144982 145968 1 + 987 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67468.peg.1297 CDS gi|344044480|gb|AFYA01000011.1| 145979 146566 2 + 588 Lysine decarboxylase family - none -
fig|6666666.67468.peg.1298 CDS gi|344044480|gb|AFYA01000011.1| 148021 146567 -1 - 1455 FIG00543888: hypothetical protein - none -
fig|6666666.67468.peg.1299 CDS gi|344044480|gb|AFYA01000011.1| 148258 149835 1 + 1578 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.67468.peg.1300 CDS gi|344044480|gb|AFYA01000011.1| 149885 152596 2 + 2712 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67468.peg.1301 CDS gi|344044480|gb|AFYA01000011.1| 152596 154119 1 + 1524 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67468.peg.1302 CDS gi|344044480|gb|AFYA01000011.1| 154116 154541 3 + 426 Possible membrane protein - none -
fig|6666666.67468.peg.1303 CDS gi|344044480|gb|AFYA01000011.1| 154567 155079 1 + 513 FIG00544492: hypothetical protein - none -
fig|6666666.67468.peg.1304 CDS gi|344044480|gb|AFYA01000011.1| 155427 155083 -3 - 345 FIG00544166: hypothetical protein - none -
fig|6666666.67468.peg.1305 CDS gi|344044480|gb|AFYA01000011.1| 155504 155824 2 + 321 FIG00547627: hypothetical protein - none -
fig|6666666.67468.peg.1306 CDS gi|344044480|gb|AFYA01000011.1| 155874 156284 3 + 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.67468.peg.1307 CDS gi|344044480|gb|AFYA01000011.1| 156802 156350 -1 - 453 FIG00548167: hypothetical protein - none -
fig|6666666.67468.peg.1308 CDS gi|344044480|gb|AFYA01000011.1| 157846 156803 -1 - 1044 FIG00547141: hypothetical protein - none -
fig|6666666.67468.peg.1309 CDS gi|344044480|gb|AFYA01000011.1| 158662 157925 -1 - 738 FIG00545459: hypothetical protein - none -
fig|6666666.67468.peg.1310 CDS gi|344044480|gb|AFYA01000011.1| 158876 161944 2 + 3069 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.67468.peg.1311 CDS gi|344044480|gb|AFYA01000011.1| 162170 162475 2 + 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67468.peg.1312 CDS gi|344044480|gb|AFYA01000011.1| 162525 162791 3 + 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67468.peg.1313 CDS gi|344044480|gb|AFYA01000011.1| 164036 163413 -2 - 624 FIG00543952: hypothetical protein - none -
fig|6666666.67468.peg.1314 CDS gi|344044480|gb|AFYA01000011.1| 164122 165039 1 + 918 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67468.peg.1315 CDS gi|344044480|gb|AFYA01000011.1| 167078 165099 -2 - 1980 xanthine/uracil permease - none -
fig|6666666.67468.peg.1316 CDS gi|344044480|gb|AFYA01000011.1| 167262 168767 3 + 1506 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.67468.peg.1317 CDS gi|344044480|gb|AFYA01000011.1| 168877 170106 1 + 1230 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.67468.peg.1318 CDS gi|344044480|gb|AFYA01000011.1| 170166 171080 3 + 915 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67468.peg.1319 CDS gi|344044480|gb|AFYA01000011.1| 171139 172437 1 + 1299 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67468.peg.1320 CDS gi|344044480|gb|AFYA01000011.1| 172536 173561 3 + 1026 FIG00544655: hypothetical protein - none -
fig|6666666.67468.peg.1321 CDS gi|344044480|gb|AFYA01000011.1| 173619 174275 3 + 657 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67468.peg.1322 CDS gi|344044480|gb|AFYA01000011.1| 174430 174903 1 + 474 Iojap protein - none -
fig|6666666.67468.peg.1323 CDS gi|344044480|gb|AFYA01000011.1| 174915 175625 3 + 711 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67468.peg.1324 CDS gi|344044480|gb|AFYA01000011.1| 175662 176312 3 + 651 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67468.peg.1325 CDS gi|344044480|gb|AFYA01000011.1| 176312 176560 2 + 249 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67468.peg.1326 CDS gi|344044480|gb|AFYA01000011.1| 176624 177277 2 + 654 FIG00545717: hypothetical protein - none -
fig|6666666.67468.peg.1327 CDS gi|344044480|gb|AFYA01000011.1| 177274 178938 1 + 1665 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.67468.peg.1328 CDS gi|344044480|gb|AFYA01000011.1| 178963 179940 1 + 978 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67468.peg.1329 CDS gi|344044480|gb|AFYA01000011.1| 179972 180373 2 + 402 ankyrin repeat containing protein - none -
fig|6666666.67468.peg.1330 CDS gi|344044480|gb|AFYA01000011.1| 180378 181049 3 + 672 L-lysine permease - none -
fig|6666666.67468.peg.1331 CDS gi|344044480|gb|AFYA01000011.1| 181374 181111 -3 - 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.67468.peg.1332 CDS gi|344044480|gb|AFYA01000011.1| 182186 181575 -2 - 612 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67468.peg.1333 CDS gi|344044480|gb|AFYA01000011.1| 182454 182332 -3 - 123 hypothetical protein - none -
fig|6666666.67468.peg.1334 CDS gi|344044480|gb|AFYA01000011.1| 182455 184302 1 + 1848 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67468.peg.1335 CDS gi|344044480|gb|AFYA01000011.1| 184581 185627 3 + 1047 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.67468.peg.1336 CDS gi|344044480|gb|AFYA01000011.1| 185624 186196 2 + 573 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism
fig|6666666.67468.peg.1337 CDS gi|344044480|gb|AFYA01000011.1| 186198 187511 3 + 1314 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.67468.peg.1338 CDS gi|344044480|gb|AFYA01000011.1| 188023 187637 -1 - 387 FIG00548470: hypothetical protein - none -
fig|6666666.67468.peg.1339 CDS gi|344044480|gb|AFYA01000011.1| 189755 188151 -2 - 1605 FIG00545027: hypothetical protein - none -
fig|6666666.67468.peg.1340 CDS gi|344044480|gb|AFYA01000011.1| 190938 189910 -3 - 1029 FIG00545079: hypothetical protein - none -
fig|6666666.67468.peg.1341 CDS gi|344044480|gb|AFYA01000011.1| 191318 191599 2 + 282 FIG00545616: hypothetical protein - none -
fig|6666666.67468.peg.1342 CDS gi|344044480|gb|AFYA01000011.1| 193783 191891 -1 - 1893 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67468.peg.1343 CDS gi|344044480|gb|AFYA01000011.1| 193965 194546 3 + 582 Phosphoesterase - none -
fig|6666666.67468.peg.1344 CDS gi|344044480|gb|AFYA01000011.1| 195187 194615 -1 - 573 Putative thiamine biosynthesis related protein - none -
fig|6666666.67468.peg.1345 CDS gi|344044480|gb|AFYA01000011.1| 196711 195413 -1 - 1299 Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30) Glyoxylate bypass;
Glyoxylate bypass cluster;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle
fig|6666666.67468.peg.1346 CDS gi|344044480|gb|AFYA01000011.1| 197310 199529 3 + 2220 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67468.peg.1347 CDS gi|344044480|gb|AFYA01000011.1| 200293 199526 -1 - 768 FIG00546833: hypothetical protein - none -
fig|6666666.67468.peg.1348 CDS gi|344044480|gb|AFYA01000011.1| 200442 201416 3 + 975 FIG00546468: hypothetical protein - none -
fig|6666666.67468.peg.1349 CDS gi|344044480|gb|AFYA01000011.1| 203080 201680 -1 - 1401 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.67468.peg.1350 CDS gi|344044480|gb|AFYA01000011.1| 203182 203295 1 + 114 hypothetical protein - none -
fig|6666666.67468.peg.1351 CDS gi|344044480|gb|AFYA01000011.1| 204210 203305 -3 - 906 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67468.peg.1352 CDS gi|344044480|gb|AFYA01000011.1| 204302 204853 2 + 552 2@1-5@1 RNA ligase RNA processing orphans
fig|6666666.67468.peg.1353 CDS gi|344044480|gb|AFYA01000011.1| 206289 204850 -3 - 1440 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1354 CDS gi|344044480|gb|AFYA01000011.1| 207112 206282 -1 - 831 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67468.peg.1355 CDS gi|344044480|gb|AFYA01000011.1| 208081 207113 -1 - 969 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67468.peg.1356 CDS gi|344044480|gb|AFYA01000011.1| 209589 208078 -3 - 1512 putative ABC transporter substrate-binding protein - none -
fig|6666666.67468.peg.1357 CDS gi|344044480|gb|AFYA01000011.1| 209650 210117 1 + 468 hypothetical membrane protein - none -
fig|6666666.67468.peg.1358 CDS gi|344044480|gb|AFYA01000011.1| 210384 211733 3 + 1350 hypothetical protein - none -
fig|6666666.67468.peg.1359 CDS gi|344044480|gb|AFYA01000011.1| 211744 212001 1 + 258 Hypothetical membrane protein - none -
fig|6666666.67468.peg.1360 CDS gi|344044480|gb|AFYA01000011.1| 212734 212012 -1 - 723 FIG00547599: hypothetical protein - none -
fig|6666666.67468.peg.1361 CDS gi|344044480|gb|AFYA01000011.1| 212813 215659 2 + 2847 Fe-S protein, homolog of lactate dehydrogenase SO1521 - none -
fig|6666666.67468.peg.1362 CDS gi|344044480|gb|AFYA01000011.1| 215665 216594 1 + 930 Auxin Efflux Carrier - none -
fig|6666666.67468.peg.1363 CDS gi|344044480|gb|AFYA01000011.1| 216606 217130 3 + 525 hypothetical membrane protein - none -
fig|6666666.67468.peg.1364 CDS gi|344044480|gb|AFYA01000011.1| 217882 217127 -1 - 756 Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family Chitin and N-acetylglucosamine utilization
fig|6666666.67468.peg.1365 CDS gi|344044480|gb|AFYA01000011.1| 218101 217952 -1 - 150 hypothetical protein - none -
fig|6666666.67468.peg.1366 CDS gi|344044480|gb|AFYA01000011.1| 218155 219261 1 + 1107 COG0665: Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.67468.peg.1367 CDS gi|344044480|gb|AFYA01000011.1| 219665 220594 2 + 930 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1368 CDS gi|344044480|gb|AFYA01000011.1| 220628 221470 2 + 843 Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1369 CDS gi|344044480|gb|AFYA01000011.1| 221467 223140 1 + 1674 Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1370 CDS gi|344044480|gb|AFYA01000011.1| 223200 223868 3 + 669 FIG00548534: hypothetical protein - none -
fig|6666666.67468.peg.1371 CDS gi|344044480|gb|AFYA01000011.1| 223880 224866 2 + 987 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.67468.peg.1372 CDS gi|344044480|gb|AFYA01000011.1| 225054 225824 3 + 771 hypothetical protein - none -
fig|6666666.67468.peg.1373 CDS gi|344044480|gb|AFYA01000011.1| 226435 225929 -1 - 507 hypothetical protein - none -
fig|6666666.67468.peg.1374 CDS gi|344044480|gb|AFYA01000011.1| 226734 226564 -3 - 171 hypothetical protein - none -
fig|6666666.67468.peg.1375 CDS gi|344044480|gb|AFYA01000011.1| 226712 228559 2 + 1848 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.67468.peg.1376 CDS gi|344044480|gb|AFYA01000011.1| 229863 228883 -3 - 981 FIG00546307: hypothetical protein - none -
fig|6666666.67468.peg.1377 CDS gi|344044480|gb|AFYA01000011.1| 231168 229888 -3 - 1281 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67468.peg.1378 CDS gi|344044480|gb|AFYA01000011.1| 232278 231172 -3 - 1107 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.67468.peg.1379 CDS gi|344044480|gb|AFYA01000011.1| 232333 232854 1 + 522 FIG00545146: hypothetical protein - none -
fig|6666666.67468.peg.1380 CDS gi|344044480|gb|AFYA01000011.1| 232966 233532 1 + 567 FIG00547918: hypothetical protein - none -
fig|6666666.67468.peg.1381 CDS gi|344044480|gb|AFYA01000011.1| 233529 235334 3 + 1806 FIG00546957: hypothetical protein - none -
fig|6666666.67468.peg.1382 CDS gi|344044480|gb|AFYA01000011.1| 235362 235931 3 + 570 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.67468.peg.1383 CDS gi|344044480|gb|AFYA01000011.1| 237023 235932 -2 - 1092 uncharacterized protein probably involved in trehalose biosynthesis - none -
fig|6666666.67468.peg.1384 CDS gi|344044480|gb|AFYA01000011.1| 238873 237020 -1 - 1854 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.67468.peg.1385 CDS gi|344044480|gb|AFYA01000011.1| 240058 238877 -1 - 1182 FIG00547479: hypothetical protein - none -
fig|6666666.67468.peg.1386 CDS gi|344044480|gb|AFYA01000011.1| 240091 242127 1 + 2037 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67468.peg.1387 CDS gi|344044480|gb|AFYA01000011.1| 242153 242359 2 + 207 putative secreted or membrane protein - none -
fig|6666666.67468.peg.1388 CDS gi|344044480|gb|AFYA01000011.1| 242352 242492 3 + 141 FIG00545202: hypothetical protein - none -
fig|6666666.67468.peg.1389 CDS gi|344044480|gb|AFYA01000011.1| 244421 242556 -2 - 1866 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1390 CDS gi|344044480|gb|AFYA01000011.1| 246633 244513 -3 - 2121 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.1391 CDS gi|344044480|gb|AFYA01000011.1| 246895 248748 1 + 1854 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67468.peg.1392 CDS gi|344044480|gb|AFYA01000011.1| 248745 249125 3 + 381 FIG00545489: hypothetical protein - none -
fig|6666666.67468.peg.1393 CDS gi|344044480|gb|AFYA01000011.1| 249476 250156 2 + 681 FIG00543880: hypothetical protein - none -
fig|6666666.67468.peg.1394 CDS gi|344044480|gb|AFYA01000011.1| 250738 250226 -1 - 513 FIG00545787: hypothetical protein - none -
fig|6666666.67468.peg.1395 CDS gi|344044480|gb|AFYA01000011.1| 250824 251966 3 + 1143 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.67468.peg.1396 CDS gi|344044480|gb|AFYA01000011.1| 251988 253016 3 + 1029 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67468.peg.1397 CDS gi|344044480|gb|AFYA01000011.1| 253083 254231 3 + 1149 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67468.peg.1398 CDS gi|344044480|gb|AFYA01000011.1| 254231 254956 2 + 726 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67468.peg.1399 CDS gi|344044480|gb|AFYA01000011.1| 255012 256031 3 + 1020 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67468.peg.1400 CDS gi|344044480|gb|AFYA01000011.1| 256028 256618 2 + 591 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67468.peg.1401 CDS gi|344044480|gb|AFYA01000011.1| 256619 257941 2 + 1323 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67468.peg.1402 CDS gi|344044480|gb|AFYA01000011.1| 258006 258962 3 + 957 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.67468.peg.1403 CDS gi|344044480|gb|AFYA01000011.1| 258981 259709 3 + 729 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67468.peg.1404 CDS gi|344044480|gb|AFYA01000011.1| 259829 260560 2 + 732 trans,polycis-decaprenyl diphosphate synthase [(2Z,6E)-farnesyl diphosphate specific] (EC 2.5.1.86) Glycyl-tRNA synthetase containing cluster;
Isoprenoinds for Quinones
fig|6666666.67468.peg.1405 CDS gi|344044480|gb|AFYA01000011.1| 260560 261633 1 + 1074 FIG00544679: hypothetical protein - none -
fig|6666666.67468.peg.1406 CDS gi|344044480|gb|AFYA01000011.1| 261693 261812 3 + 120 hypothetical protein - none -
fig|6666666.67468.peg.1407 CDS gi|344044480|gb|AFYA01000011.1| 262645 261809 -1 - 837 hypothetical protein - none -
fig|6666666.67468.peg.1408 CDS gi|344044721|gb|AFYA01000010.1| 515 144 -2 - 372 FIG00545499: hypothetical protein - none -
fig|6666666.67468.peg.1409 CDS gi|344044721|gb|AFYA01000010.1| 1232 540 -2 - 693 FIG00545875: hypothetical protein - none -
fig|6666666.67468.peg.1410 CDS gi|344044721|gb|AFYA01000010.1| 2098 1229 -1 - 870 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.67468.peg.1411 CDS gi|344044721|gb|AFYA01000010.1| 2369 2142 -2 - 228 hypothetical protein - none -
fig|6666666.67468.peg.1412 CDS gi|344044721|gb|AFYA01000010.1| 2431 2784 1 + 354 FIG00547488: hypothetical protein - none -
fig|6666666.67468.peg.1413 CDS gi|344044721|gb|AFYA01000010.1| 3296 2781 -2 - 516 16S rRNA processing protein RimM - none -
fig|6666666.67468.peg.1414 CDS gi|344044721|gb|AFYA01000010.1| 3426 3776 3 + 351 FIG00544922: hypothetical protein - none -
fig|6666666.67468.peg.1415 CDS gi|344044721|gb|AFYA01000010.1| 4357 3848 -1 - 510 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.67468.peg.1416 CDS gi|344044721|gb|AFYA01000010.1| 4673 5149 2 + 477 putative ankyrin repeat-containing protein - none -
fig|6666666.67468.peg.1417 CDS gi|344044721|gb|AFYA01000010.1| 6038 5169 -2 - 870 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.1418 CDS gi|344044721|gb|AFYA01000010.1| 6949 6035 -1 - 915 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1419 CDS gi|344044721|gb|AFYA01000010.1| 8623 6989 -1 - 1635 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67468.peg.1420 CDS gi|344044721|gb|AFYA01000010.1| 10812 8734 -3 - 2079 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.67468.peg.1421 CDS gi|344044721|gb|AFYA01000010.1| 11172 10834 -3 - 339 nitrogen regulatory protein PII - none -
fig|6666666.67468.peg.1422 CDS gi|344044721|gb|AFYA01000010.1| 12544 11228 -1 - 1317 Ammonium transporter Ammonia assimilation
fig|6666666.67468.peg.1423 CDS gi|344044721|gb|AFYA01000010.1| 14562 12859 -3 - 1704 iron-regulated protein frpC - none -
fig|6666666.67468.peg.1424 CDS gi|344044721|gb|AFYA01000010.1| 16867 15107 -1 - 1761 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67468.peg.1425 CDS gi|344044721|gb|AFYA01000010.1| 16918 17040 1 + 123 hypothetical protein - none -
fig|6666666.67468.peg.1426 CDS gi|344044721|gb|AFYA01000010.1| 20411 17037 -2 - 3375 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.67468.peg.1427 CDS gi|344044721|gb|AFYA01000010.1| 24022 20555 -1 - 3468 Chromosome partition protein smc - none -
fig|6666666.67468.peg.1428 CDS gi|344044721|gb|AFYA01000010.1| 24321 24037 -3 - 285 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.1429 CDS gi|344044721|gb|AFYA01000010.1| 26188 24332 -1 - 1857 FIG00545462: hypothetical protein - none -
fig|6666666.67468.peg.1430 CDS gi|344044721|gb|AFYA01000010.1| 26352 26498 3 + 147 hypothetical protein - none -
fig|6666666.67468.peg.1431 CDS gi|344044721|gb|AFYA01000010.1| 26796 26665 -3 - 132 Co/Zn/Cd efflux system component - none -
fig|6666666.67468.peg.1432 CDS gi|344044721|gb|AFYA01000010.1| 27734 26874 -2 - 861 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67468.peg.1433 CDS gi|344044721|gb|AFYA01000010.1| 28470 27727 -3 - 744 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67468.peg.1434 CDS gi|344044721|gb|AFYA01000010.1| 29003 28467 -2 - 537 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67468.peg.1435 CDS gi|344044721|gb|AFYA01000010.1| 30027 29101 -3 - 927 Cell division initiation protein - none -
fig|6666666.67468.peg.1436 CDS gi|344044721|gb|AFYA01000010.1| 30107 31732 2 + 1626 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1437 CDS gi|344044721|gb|AFYA01000010.1| 31729 33261 1 + 1533 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1438 CDS gi|344044721|gb|AFYA01000010.1| 34646 33303 -2 - 1344 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67468.peg.1439 CDS gi|344044721|gb|AFYA01000010.1| 35447 36571 2 + 1125 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67468.peg.1440 CDS gi|344044721|gb|AFYA01000010.1| 36966 36568 -3 - 399 FIG00544156: hypothetical protein - none -
fig|6666666.67468.peg.1441 CDS gi|344044721|gb|AFYA01000010.1| 36997 38325 1 + 1329 No significant database matches - none -
fig|6666666.67468.peg.1442 CDS gi|344044721|gb|AFYA01000010.1| 38373 39638 3 + 1266 Peptidase M20D, amidohydrolase - none -
fig|6666666.67468.peg.1443 CDS gi|344044721|gb|AFYA01000010.1| 39973 39635 -1 - 339 FIG00544491: hypothetical protein - none -
fig|6666666.67468.peg.1444 CDS gi|344044721|gb|AFYA01000010.1| 40434 40012 -3 - 423 hypothetical membrane protein - none -
fig|6666666.67468.peg.1445 CDS gi|344044721|gb|AFYA01000010.1| 43046 40554 -2 - 2493 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67468.peg.1446 CDS gi|344044721|gb|AFYA01000010.1| 44059 43157 -1 - 903 Glyoxalase family protein - none -
fig|6666666.67468.peg.1447 CDS gi|344044721|gb|AFYA01000010.1| 45619 44234 -1 - 1386 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.1448 CDS gi|344044721|gb|AFYA01000010.1| 46827 45868 -3 - 960 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67468.peg.1449 CDS gi|344044721|gb|AFYA01000010.1| 47718 46933 -3 - 786 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67468.peg.1450 CDS gi|344044721|gb|AFYA01000010.1| 48457 47798 -1 - 660 FIG00545012: hypothetical protein - none -
fig|6666666.67468.peg.1451 CDS gi|344044721|gb|AFYA01000010.1| 48842 48486 -2 - 357 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis;
Zinc regulated enzymes
fig|6666666.67468.peg.1452 CDS gi|344044721|gb|AFYA01000010.1| 49615 48839 -1 - 777 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67468.peg.1453 CDS gi|344044721|gb|AFYA01000010.1| 50429 49617 -2 - 813 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67468.peg.1454 CDS gi|344044721|gb|AFYA01000010.1| 51188 50448 -2 - 741 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.67468.peg.1455 CDS gi|344044721|gb|AFYA01000010.1| 51842 51207 -2 - 636 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67468.peg.1456 CDS gi|344044721|gb|AFYA01000010.1| 52926 52786 -3 - 141 FIG00549720: hypothetical protein - none -
fig|6666666.67468.peg.1457 CDS gi|344044721|gb|AFYA01000010.1| 54154 52886 -1 - 1269 putative transport protein - none -
fig|6666666.67468.peg.1458 CDS gi|344044721|gb|AFYA01000010.1| 54431 54204 -2 - 228 FIG00544135: hypothetical protein - none -
fig|6666666.67468.peg.1459 CDS gi|344044721|gb|AFYA01000010.1| 55042 54434 -1 - 609 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67468.peg.1460 CDS gi|344044721|gb|AFYA01000010.1| 56159 55059 -2 - 1101 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67468.peg.1461 CDS gi|344044721|gb|AFYA01000010.1| 57493 56165 -1 - 1329 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67468.peg.1462 CDS gi|344044721|gb|AFYA01000010.1| 57727 58929 1 + 1203 FIG00546979: hypothetical protein - none -
fig|6666666.67468.peg.1463 CDS gi|344044721|gb|AFYA01000010.1| 59440 59024 -1 - 417 FIG00545115: hypothetical protein - none -
fig|6666666.67468.peg.1464 CDS gi|344044721|gb|AFYA01000010.1| 60408 59752 -3 - 657 FIG00545144: hypothetical protein - none -
fig|6666666.67468.peg.1465 CDS gi|344044721|gb|AFYA01000010.1| 60607 61101 1 + 495 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.67468.peg.1466 CDS gi|344044721|gb|AFYA01000010.1| 61162 63618 1 + 2457 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67468.peg.1467 CDS gi|344044721|gb|AFYA01000010.1| 63729 64532 3 + 804 FIG00546108: hypothetical protein - none -
fig|6666666.67468.peg.1468 CDS gi|344044721|gb|AFYA01000010.1| 65343 64567 -3 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.67468.peg.1469 CDS gi|344044721|gb|AFYA01000010.1| 66359 65346 -2 - 1014 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Inositol catabolism
fig|6666666.67468.peg.1470 CDS gi|344044721|gb|AFYA01000010.1| 66486 67484 3 + 999 transcriptional regulator, LacI family - none -
fig|6666666.67468.peg.1471 CDS gi|344044721|gb|AFYA01000010.1| 68475 67675 -3 - 801 putative iron ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1472 CDS gi|344044721|gb|AFYA01000010.1| 69516 68476 -3 - 1041 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.67468.peg.1473 CDS gi|344044721|gb|AFYA01000010.1| 70512 69523 -3 - 990 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.67468.peg.1474 CDS gi|344044721|gb|AFYA01000010.1| 70989 70594 -3 - 396 Transcriptional regulator, HxlR family - none -
fig|6666666.67468.peg.1475 CDS gi|344044721|gb|AFYA01000010.1| 71251 72654 1 + 1404 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67468.peg.1476 CDS gi|344044721|gb|AFYA01000010.1| 72922 73347 1 + 426 FIG00547564: hypothetical protein - none -
fig|6666666.67468.peg.1477 CDS gi|344044721|gb|AFYA01000010.1| 73433 75868 2 + 2436 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.67468.peg.1478 CDS gi|344044721|gb|AFYA01000010.1| 75912 76937 3 + 1026 FIG00544169: hypothetical protein - none -
fig|6666666.67468.peg.1479 CDS gi|344044721|gb|AFYA01000010.1| 77059 77190 1 + 132 FIG00544735: hypothetical protein - none -
fig|6666666.67468.peg.1480 CDS gi|344044721|gb|AFYA01000010.1| 77573 78619 2 + 1047 putative oxidoreductase - none -
fig|6666666.67468.peg.1481 CDS gi|344044721|gb|AFYA01000010.1| 79007 78627 -2 - 381 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67468.peg.1482 CDS gi|344044721|gb|AFYA01000010.1| 79251 79018 -3 - 234 FIG00544856: hypothetical protein - none -
fig|6666666.67468.peg.1483 CDS gi|344044721|gb|AFYA01000010.1| 79935 79282 -3 - 654 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.67468.peg.1484 CDS gi|344044721|gb|AFYA01000010.1| 79990 81714 1 + 1725 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) Trehalose Biosynthesis
fig|6666666.67468.peg.1485 CDS gi|344044721|gb|AFYA01000010.1| 83027 81753 -2 - 1275 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67468.peg.1486 CDS gi|344044721|gb|AFYA01000010.1| 83278 83787 1 + 510 hypothetical membrane protein - none -
fig|6666666.67468.peg.1487 CDS gi|344044721|gb|AFYA01000010.1| 85099 83894 -1 - 1206 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.67468.peg.1488 CDS gi|344044721|gb|AFYA01000010.1| 88812 85246 -3 - 3567 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67468.peg.1489 CDS gi|344044721|gb|AFYA01000010.1| 88909 89757 1 + 849 Protein rarD - none -
fig|6666666.67468.peg.1490 CDS gi|344044721|gb|AFYA01000010.1| 90418 90546 1 + 129 FIG00549670: hypothetical protein - none -
fig|6666666.67468.peg.1491 CDS gi|344044721|gb|AFYA01000010.1| 90543 91529 3 + 987 predicted Co/Zn/Cd cation transporter - none -
fig|6666666.67468.peg.1492 CDS gi|344044721|gb|AFYA01000010.1| 92451 91564 -3 - 888 Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10) Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.1493 CDS gi|344044721|gb|AFYA01000010.1| 95255 92619 -2 - 2637 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.1494 CDS gi|344044721|gb|AFYA01000010.1| 96196 95243 -1 - 954 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67468.peg.1495 CDS gi|344044721|gb|AFYA01000010.1| 96883 96302 -1 - 582 FIG00544566: hypothetical protein - none -
fig|6666666.67468.peg.1496 CDS gi|344044721|gb|AFYA01000010.1| 97815 96883 -3 - 933 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67468.peg.1497 CDS gi|344044721|gb|AFYA01000010.1| 98360 97815 -2 - 546 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67468.peg.1498 CDS gi|344044721|gb|AFYA01000010.1| 98572 99576 1 + 1005 FIG00544955: hypothetical protein - none -
fig|6666666.67468.peg.1499 CDS gi|344044721|gb|AFYA01000010.1| 99734 101386 2 + 1653 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1500 CDS gi|344044721|gb|AFYA01000010.1| 101992 101390 -1 - 603 Putative secreted protein - none -
fig|6666666.67468.peg.1501 CDS gi|344044721|gb|AFYA01000010.1| 102304 103281 1 + 978 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67468.peg.1502 CDS gi|344044721|gb|AFYA01000010.1| 105169 103778 -1 - 1392 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67468.peg.1503 CDS gi|344044721|gb|AFYA01000010.1| 106129 105269 -1 - 861 permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.67468.peg.1504 CDS gi|344044721|gb|AFYA01000010.1| 107142 106141 -3 - 1002 putative transcriptional regulator - none -
fig|6666666.67468.peg.1505 CDS gi|344044721|gb|AFYA01000010.1| 107750 107136 -2 - 615 FIG00544417: hypothetical protein - none -
fig|6666666.67468.peg.1506 CDS gi|344044721|gb|AFYA01000010.1| 111030 107866 -3 - 3165 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67468.peg.1507 CDS gi|344044721|gb|AFYA01000010.1| 111511 111350 -1 - 162 FIG00546685: hypothetical protein - none -
fig|6666666.67468.peg.1508 CDS gi|344044721|gb|AFYA01000010.1| 112741 111644 -1 - 1098 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67468.peg.1509 CDS gi|344044721|gb|AFYA01000010.1| 113499 113230 -3 - 270 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67468.peg.1510 CDS gi|344044721|gb|AFYA01000010.1| 114216 113758 -3 - 459 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67468.peg.1511 CDS gi|344044721|gb|AFYA01000010.1| 114997 114293 -1 - 705 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67468.peg.1512 CDS gi|344044721|gb|AFYA01000010.1| 115613 114999 -2 - 615 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67468.peg.1513 CDS gi|344044721|gb|AFYA01000010.1| 117086 115767 -2 - 1320 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67468.peg.1514 CDS gi|344044721|gb|AFYA01000010.1| 118005 117337 -3 - 669 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67468.peg.1515 CDS gi|344044721|gb|AFYA01000010.1| 119493 118033 -3 - 1461 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67468.peg.1516 CDS gi|344044721|gb|AFYA01000010.1| 120619 119528 -1 - 1092 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67468.peg.1517 CDS gi|344044721|gb|AFYA01000010.1| 122301 120649 -3 - 1653 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67468.peg.1518 CDS gi|344044721|gb|AFYA01000010.1| 123722 122304 -2 - 1419 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67468.peg.1519 CDS gi|344044721|gb|AFYA01000010.1| 124829 123729 -2 - 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67468.peg.1520 CDS gi|344044721|gb|AFYA01000010.1| 126380 124836 -2 - 1545 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67468.peg.1521 CDS gi|344044721|gb|AFYA01000010.1| 127955 126390 -2 - 1566 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67468.peg.1522 CDS gi|344044721|gb|AFYA01000010.1| 130034 128079 -2 - 1956 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.1523 CDS gi|344044721|gb|AFYA01000010.1| 130987 130190 -1 - 798 FIG00544004: hypothetical protein - none -
fig|6666666.67468.peg.1524 CDS gi|344044721|gb|AFYA01000010.1| 131997 130984 -3 - 1014 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67468.peg.1525 CDS gi|344044721|gb|AFYA01000010.1| 132674 132243 -2 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67468.peg.1526 CDS gi|344044721|gb|AFYA01000010.1| 133766 133374 -2 - 393 Possible membrane protein - none -
fig|6666666.67468.peg.1527 CDS gi|344044721|gb|AFYA01000010.1| 134521 134096 -1 - 426 FIG00544752: hypothetical protein - none -
fig|6666666.67468.peg.1528 CDS gi|344044721|gb|AFYA01000010.1| 134746 135309 1 + 564 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67468.peg.1529 CDS gi|344044721|gb|AFYA01000010.1| 136296 135316 -3 - 981 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67468.peg.1530 CDS gi|344044721|gb|AFYA01000010.1| 136407 137507 3 + 1101 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.67468.peg.1531 CDS gi|344044721|gb|AFYA01000010.1| 137517 139046 3 + 1530 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67468.peg.1532 CDS gi|344044721|gb|AFYA01000010.1| 139487 139116 -2 - 372 Conserved hypothetical regulatory protein - none -
fig|6666666.67468.peg.1533 CDS gi|344044721|gb|AFYA01000010.1| 139629 141863 3 + 2235 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67468.peg.1534 CDS gi|344044721|gb|AFYA01000010.1| 141863 143101 2 + 1239 FIG00549427: hypothetical protein - none -
fig|6666666.67468.peg.1535 CDS gi|344044721|gb|AFYA01000010.1| 143194 144504 1 + 1311 FIG00544316: hypothetical protein - none -
fig|6666666.67468.peg.1536 CDS gi|344044721|gb|AFYA01000010.1| 145974 144574 -3 - 1401 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.1537 CDS gi|344044721|gb|AFYA01000010.1| 146556 146050 -3 - 507 FIG00544385: hypothetical protein - none -
fig|6666666.67468.peg.1538 CDS gi|344044721|gb|AFYA01000010.1| 146697 149135 3 + 2439 putative membrane protein - none -
fig|6666666.67468.peg.1539 CDS gi|344044721|gb|AFYA01000010.1| 149240 150676 2 + 1437 FIG00548782: hypothetical protein - none -
fig|6666666.67468.peg.1540 CDS gi|344044721|gb|AFYA01000010.1| 150932 150744 -2 - 189 hypothetical membrane protein - none -
fig|6666666.67468.peg.1541 CDS gi|344044721|gb|AFYA01000010.1| 152316 151075 -3 - 1242 hypothetical membrane protein - none -
fig|6666666.67468.peg.1542 CDS gi|344044721|gb|AFYA01000010.1| 153308 152505 -2 - 804 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.1543 CDS gi|344044721|gb|AFYA01000010.1| 154380 153409 -3 - 972 ROK family protein (putative glucokinase) - none -
fig|6666666.67468.peg.1544 CDS gi|344044721|gb|AFYA01000010.1| 155605 154460 -1 - 1146 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67468.peg.1545 CDS gi|344044721|gb|AFYA01000010.1| 156680 155631 -2 - 1050 NLP/P60 family protein - none -
fig|6666666.67468.peg.1546 CDS gi|344044721|gb|AFYA01000010.1| 157431 156796 -3 - 636 putative secreted protein - none -
fig|6666666.67468.peg.1547 CDS gi|344044721|gb|AFYA01000010.1| 159923 158304 -2 - 1620 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67468.peg.1548 CDS gi|344044721|gb|AFYA01000010.1| 161146 159920 -1 - 1227 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67468.peg.1549 CDS gi|344044721|gb|AFYA01000010.1| 162030 161143 -3 - 888 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67468.peg.1550 CDS gi|344044721|gb|AFYA01000010.1| 162695 162105 -2 - 591 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67468.peg.1551 CDS gi|344044721|gb|AFYA01000010.1| 163090 162953 -1 - 138 hypothetical protein - none -
fig|6666666.67468.peg.1552 CDS gi|344044721|gb|AFYA01000010.1| 163736 163305 -2 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67468.peg.1553 CDS gi|344044721|gb|AFYA01000010.1| 164833 163754 -1 - 1080 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67468.peg.1554 CDS gi|344044721|gb|AFYA01000010.1| 165276 165395 3 + 120 hypothetical protein - none -
fig|6666666.67468.peg.1555 CDS gi|344044721|gb|AFYA01000010.1| 165352 167274 1 + 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67468.peg.1556 CDS gi|344044721|gb|AFYA01000010.1| 167763 167419 -3 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67468.peg.1557 CDS gi|344044721|gb|AFYA01000010.1| 168087 168806 3 + 720 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67468.peg.1558 CDS gi|344044721|gb|AFYA01000010.1| 168810 169334 3 + 525 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) - none -
fig|6666666.67468.peg.1559 CDS gi|344044721|gb|AFYA01000010.1| 169363 170439 1 + 1077 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.67468.peg.1560 CDS gi|344044721|gb|AFYA01000010.1| 170451 171374 3 + 924 Cobalamin synthase - none -
fig|6666666.67468.peg.1561 CDS gi|344044721|gb|AFYA01000010.1| 172577 171861 -2 - 717 Short chain dehydrogenase - none -
fig|6666666.67468.peg.1562 CDS gi|344044721|gb|AFYA01000010.1| 173851 172748 -1 - 1104 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67468.peg.1563 CDS gi|344044721|gb|AFYA01000010.1| 174032 175573 2 + 1542 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67468.peg.1564 CDS gi|344044721|gb|AFYA01000010.1| 175907 175581 -2 - 327 Putative oxidoreductase - none -
fig|6666666.67468.peg.1565 CDS gi|344044721|gb|AFYA01000010.1| 176105 177769 2 + 1665 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67468.peg.1566 CDS gi|344044721|gb|AFYA01000010.1| 177908 178663 2 + 756 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67468.peg.1567 CDS gi|344044721|gb|AFYA01000010.1| 178800 179846 3 + 1047 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67468.peg.1568 CDS gi|344044721|gb|AFYA01000010.1| 179886 180758 3 + 873 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67468.peg.1569 CDS gi|344044721|gb|AFYA01000010.1| 180917 182536 2 + 1620 putative transport protein - none -
fig|6666666.67468.peg.1570 CDS gi|344044881|gb|AFYA01000009.1| 414 1016 3 + 603 FIG00543909: hypothetical protein - none -
fig|6666666.67468.peg.1571 CDS gi|344044881|gb|AFYA01000009.1| 1032 1580 3 + 549 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67468.peg.1572 CDS gi|344044881|gb|AFYA01000009.1| 1607 2815 2 + 1209 Dyp-type peroxidase family protein - none -
fig|6666666.67468.peg.1573 CDS gi|344044881|gb|AFYA01000009.1| 3086 5146 2 + 2061 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.67468.peg.1574 CDS gi|344044881|gb|AFYA01000009.1| 5250 5792 3 + 543 FIG049476: HIT family protein - none -
fig|6666666.67468.peg.1575 CDS gi|344044881|gb|AFYA01000009.1| 5792 6451 2 + 660 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.1576 CDS gi|344044881|gb|AFYA01000009.1| 6474 7439 3 + 966 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.67468.peg.1577 CDS gi|344044881|gb|AFYA01000009.1| 7452 8525 3 + 1074 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.67468.peg.1578 CDS gi|344044881|gb|AFYA01000009.1| 8522 8986 2 + 465 FIG053954: Probable conserved membrane protein - none -
fig|6666666.67468.peg.1579 CDS gi|344044881|gb|AFYA01000009.1| 9502 9026 -1 - 477 FIG00546244: hypothetical protein - none -
fig|6666666.67468.peg.1580 CDS gi|344044881|gb|AFYA01000009.1| 9611 10459 2 + 849 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.67468.peg.1581 CDS gi|344044881|gb|AFYA01000009.1| 10528 10659 1 + 132 hypothetical protein - none -
fig|6666666.67468.peg.1582 CDS gi|344044881|gb|AFYA01000009.1| 10729 11484 1 + 756 FIG000859: hypothetical protein - none -
fig|6666666.67468.peg.1583 CDS gi|344044881|gb|AFYA01000009.1| 11621 12286 2 + 666 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67468.peg.1584 CDS gi|344044881|gb|AFYA01000009.1| 12326 12946 2 + 621 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67468.peg.1585 CDS gi|344044881|gb|AFYA01000009.1| 12953 14044 2 + 1092 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67468.peg.1586 CDS gi|344044881|gb|AFYA01000009.1| 14093 14458 2 + 366 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.67468.peg.1587 CDS gi|344044881|gb|AFYA01000009.1| 14747 16645 2 + 1899 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67468.peg.1588 CDS gi|344044881|gb|AFYA01000009.1| 16648 17859 1 + 1212 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67468.peg.1589 CDS gi|344044881|gb|AFYA01000009.1| 18096 17965 -3 - 132 hypothetical protein - none -
fig|6666666.67468.peg.1590 CDS gi|344044881|gb|AFYA01000009.1| 18360 19961 3 + 1602 hypothetical protein - none -
fig|6666666.67468.peg.1591 CDS gi|344044881|gb|AFYA01000009.1| 19965 20522 3 + 558 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67468.peg.1592 CDS gi|344044881|gb|AFYA01000009.1| 20598 22832 3 + 2235 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67468.peg.1593 CDS gi|344044881|gb|AFYA01000009.1| 23189 22914 -2 - 276 hypothetical membrane protein - none -
fig|6666666.67468.peg.1594 CDS gi|344044881|gb|AFYA01000009.1| 23941 23393 -1 - 549 FIG01263599: hypothetical protein - none -
fig|6666666.67468.peg.1595 CDS gi|344044881|gb|AFYA01000009.1| 25344 24502 -3 - 843 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.67468.peg.1596 CDS gi|344044881|gb|AFYA01000009.1| 25522 26115 1 + 594 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67468.peg.1597 CDS gi|344044881|gb|AFYA01000009.1| 26161 27450 1 + 1290 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67468.peg.1598 CDS gi|344044881|gb|AFYA01000009.1| 27519 29207 3 + 1689 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.67468.peg.1599 CDS gi|344044881|gb|AFYA01000009.1| 30553 29204 -1 - 1350 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67468.peg.1600 CDS gi|344044881|gb|AFYA01000009.1| 31595 30915 -2 - 681 FMN reductase (EC 1.5.1.29) Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67468.peg.1601 CDS gi|344044881|gb|AFYA01000009.1| 32737 31622 -1 - 1116 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67468.peg.1602 CDS gi|344044881|gb|AFYA01000009.1| 33437 32829 -2 - 609 Putative CBS domain containing protein - none -
fig|6666666.67468.peg.1603 CDS gi|344044881|gb|AFYA01000009.1| 33393 33512 3 + 120 hypothetical protein - none -
fig|6666666.67468.peg.1604 CDS gi|344044881|gb|AFYA01000009.1| 34125 33529 -3 - 597 transcriptional regulator - none -
fig|6666666.67468.peg.1605 CDS gi|344044881|gb|AFYA01000009.1| 34219 34869 1 + 651 No significant database matches - none -
fig|6666666.67468.peg.1606 CDS gi|344044881|gb|AFYA01000009.1| 34869 36728 3 + 1860 Putative membrane protein - none -
fig|6666666.67468.peg.1607 CDS gi|344044881|gb|AFYA01000009.1| 36759 39437 3 + 2679 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.67468.peg.1608 CDS gi|344044881|gb|AFYA01000009.1| 40394 39489 -2 - 906 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67468.peg.1609 CDS gi|344044881|gb|AFYA01000009.1| 40627 42453 1 + 1827 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67468.peg.1610 CDS gi|344044881|gb|AFYA01000009.1| 42642 43841 3 + 1200 FIG00544116: hypothetical protein - none -
fig|6666666.67468.peg.1611 CDS gi|344044881|gb|AFYA01000009.1| 43895 45274 2 + 1380 ATPase, AAA family - none -
fig|6666666.67468.peg.1612 CDS gi|344044881|gb|AFYA01000009.1| 45389 48055 2 + 2667 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67468.peg.1613 CDS gi|344044881|gb|AFYA01000009.1| 48267 48815 3 + 549 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.67468.peg.1614 CDS gi|344044881|gb|AFYA01000009.1| 48812 49981 2 + 1170 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67468.peg.1615 CDS gi|344044881|gb|AFYA01000009.1| 49998 50828 3 + 831 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.1616 CDS gi|344044881|gb|AFYA01000009.1| 51933 51178 -3 - 756 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1617 CDS gi|344044881|gb|AFYA01000009.1| 52889 51930 -2 - 960 ABC-type transporter, periplasmic component - none -
fig|6666666.67468.peg.1618 CDS gi|344044881|gb|AFYA01000009.1| 53979 52903 -3 - 1077 ABC transporter (iron.B12.siderophore.hemin) , permease component - none -
fig|6666666.67468.peg.1619 CDS gi|344044881|gb|AFYA01000009.1| 54034 54339 1 + 306 predicted transcriptional regulator - none -
fig|6666666.67468.peg.1620 CDS gi|344044881|gb|AFYA01000009.1| 54378 54791 3 + 414 signal peptidase - none -
fig|6666666.67468.peg.1621 CDS gi|344044881|gb|AFYA01000009.1| 54861 56093 3 + 1233 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.1622 CDS gi|344044881|gb|AFYA01000009.1| 56083 56655 1 + 573 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.1623 CDS gi|344044881|gb|AFYA01000009.1| 56727 57824 3 + 1098 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.1624 CDS gi|344044881|gb|AFYA01000009.1| 57891 58982 3 + 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67468.peg.1625 CDS gi|344044881|gb|AFYA01000009.1| 59067 59630 3 + 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67468.peg.1626 CDS gi|344044881|gb|AFYA01000009.1| 59667 60362 3 + 696 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67468.peg.1627 CDS gi|344044881|gb|AFYA01000009.1| 60987 60736 -3 - 252 FIG00548279: hypothetical protein - none -
fig|6666666.67468.peg.1628 CDS gi|344044881|gb|AFYA01000009.1| 61453 60989 -1 - 465 FIG00546283: hypothetical protein - none -
fig|6666666.67468.peg.1629 CDS gi|344044881|gb|AFYA01000009.1| 61922 61443 -2 - 480 FIG00544983: hypothetical protein - none -
fig|6666666.67468.peg.1630 CDS gi|344044881|gb|AFYA01000009.1| 63516 61990 -3 - 1527 Cell division inhibitor Persister Cells
fig|6666666.67468.peg.1631 CDS gi|344044881|gb|AFYA01000009.1| 63825 64403 3 + 579 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67468.peg.1632 CDS gi|344044881|gb|AFYA01000009.1| 64404 65342 3 + 939 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67468.peg.1633 CDS gi|344044881|gb|AFYA01000009.1| 65367 66710 3 + 1344 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis;
Zinc regulated enzymes
fig|6666666.67468.peg.1634 CDS gi|344044881|gb|AFYA01000009.1| 66840 68021 3 + 1182 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67468.peg.1635 CDS gi|344044881|gb|AFYA01000009.1| 68027 71368 2 + 3342 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67468.peg.1636 CDS gi|344044881|gb|AFYA01000009.1| 71374 72210 1 + 837 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1637 CDS gi|344044881|gb|AFYA01000009.1| 72416 72736 2 + 321 integration host factor - none -
fig|6666666.67468.peg.1638 CDS gi|344044881|gb|AFYA01000009.1| 72744 73316 3 + 573 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67468.peg.1639 CDS gi|344044881|gb|AFYA01000009.1| 73408 73695 1 + 288 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67468.peg.1640 CDS gi|344044881|gb|AFYA01000009.1| 73957 75219 1 + 1263 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67468.peg.1641 CDS gi|344044881|gb|AFYA01000009.1| 75327 76550 3 + 1224 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67468.peg.1642 CDS gi|344044881|gb|AFYA01000009.1| 76577 78643 2 + 2067 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67468.peg.1643 CDS gi|344044881|gb|AFYA01000009.1| 78794 79261 2 + 468 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67468.peg.1644 CDS gi|344044881|gb|AFYA01000009.1| 79281 80228 3 + 948 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67468.peg.1645 CDS gi|344044881|gb|AFYA01000009.1| 80225 81736 2 + 1512 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.67468.peg.1646 CDS gi|344044881|gb|AFYA01000009.1| 81782 82441 2 + 660 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1647 CDS gi|344044881|gb|AFYA01000009.1| 82442 83428 2 + 987 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1648 CDS gi|344044881|gb|AFYA01000009.1| 83429 84064 2 + 636 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67468.peg.1649 CDS gi|344044881|gb|AFYA01000009.1| 84075 85343 3 + 1269 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67468.peg.1650 CDS gi|344044881|gb|AFYA01000009.1| 85355 85834 2 + 480 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1651 CDS gi|344044881|gb|AFYA01000009.1| 85921 86502 1 + 582 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67468.peg.1652 CDS gi|344044881|gb|AFYA01000009.1| 86510 88600 2 + 2091 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67468.peg.1653 CDS gi|344044881|gb|AFYA01000009.1| 88622 89551 2 + 930 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.67468.peg.1654 CDS gi|344044881|gb|AFYA01000009.1| 89568 90593 3 + 1026 Hypothetical protein UPF0052 - none -
fig|6666666.67468.peg.1655 CDS gi|344044881|gb|AFYA01000009.1| 90603 91586 3 + 984 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.67468.peg.1656 CDS gi|344044881|gb|AFYA01000009.1| 92075 93079 2 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67468.peg.1657 CDS gi|344044881|gb|AFYA01000009.1| 93296 94513 2 + 1218 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.1658 CDS gi|344044881|gb|AFYA01000009.1| 94589 95368 2 + 780 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.1659 CDS gi|344044881|gb|AFYA01000009.1| 95525 98284 2 + 2760 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.1660 CDS gi|344044881|gb|AFYA01000009.1| 98389 98622 1 + 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67468.peg.1661 CDS gi|344044881|gb|AFYA01000009.1| 99045 100403 3 + 1359 Ammonium transporter Ammonia assimilation
fig|6666666.67468.peg.1662 CDS gi|344044881|gb|AFYA01000009.1| 100400 101548 2 + 1149 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67468.peg.1663 CDS gi|344044881|gb|AFYA01000009.1| 101563 102705 1 + 1143 sarcosine oxidase( EC:1.5.3.1 ) - none -
fig|6666666.67468.peg.1664 CDS gi|344044881|gb|AFYA01000009.1| 103580 102873 -2 - 708 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.67468.peg.1665 CDS gi|344044881|gb|AFYA01000009.1| 104556 103597 -3 - 960 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial Entner-Doudoroff Pathway
fig|6666666.67468.peg.1666 CDS gi|344044881|gb|AFYA01000009.1| 106115 104571 -2 - 1545 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.67468.peg.1667 CDS gi|344044881|gb|AFYA01000009.1| 107302 106220 -1 - 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.67468.peg.1668 CDS gi|344044881|gb|AFYA01000009.1| 109584 107482 -3 - 2103 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67468.peg.1669 CDS gi|344044881|gb|AFYA01000009.1| 110428 111360 1 + 933 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67468.peg.1670 CDS gi|344044881|gb|AFYA01000009.1| 112570 111431 -1 - 1140 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67468.peg.1671 CDS gi|344044881|gb|AFYA01000009.1| 115263 112912 -3 - 2352 FIG00545859: hypothetical protein - none -
fig|6666666.67468.peg.1672 CDS gi|344044881|gb|AFYA01000009.1| 116413 115373 -1 - 1041 Cytochrome oxidase assembly protein - none -
fig|6666666.67468.peg.1673 CDS gi|344044881|gb|AFYA01000009.1| 117339 116533 -3 - 807 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67468.peg.1674 CDS gi|344044881|gb|AFYA01000009.1| 118370 117348 -2 - 1023 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67468.peg.1675 CDS gi|344044881|gb|AFYA01000009.1| 120152 118377 -2 - 1776 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67468.peg.1676 CDS gi|344044881|gb|AFYA01000009.1| 120473 121159 2 + 687 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67468.peg.1677 CDS gi|344044881|gb|AFYA01000009.1| 121175 122620 2 + 1446 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67468.peg.1678 CDS gi|344044881|gb|AFYA01000009.1| 122626 123804 1 + 1179 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67468.peg.1679 CDS gi|344044881|gb|AFYA01000009.1| 123928 124686 1 + 759 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67468.peg.1680 CDS gi|344044881|gb|AFYA01000009.1| 124688 125953 2 + 1266 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67468.peg.1681 CDS gi|344044881|gb|AFYA01000009.1| 125953 126402 1 + 450 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67468.peg.1682 CDS gi|344044881|gb|AFYA01000009.1| 126428 126841 2 + 414 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67468.peg.1683 CDS gi|344044881|gb|AFYA01000009.1| 127498 126914 -1 - 585 FIG00546830: hypothetical protein - none -
fig|6666666.67468.peg.1684 CDS gi|344044881|gb|AFYA01000009.1| 127700 130459 2 + 2760 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.67468.peg.1685 CDS gi|344044881|gb|AFYA01000009.1| 130525 132156 1 + 1632 ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.1686 CDS gi|344044881|gb|AFYA01000009.1| 134167 133958 -1 - 210 hypothetical protein - none -
fig|6666666.67468.peg.1687 CDS gi|344044881|gb|AFYA01000009.1| 134168 134341 2 + 174 FIG00544927: hypothetical protein - none -
fig|6666666.67468.peg.1688 CDS gi|344044881|gb|AFYA01000009.1| 136920 134338 -3 - 2583 Ca ion P-type ATPase - none -
fig|6666666.67468.peg.1689 CDS gi|344044881|gb|AFYA01000009.1| 138644 137256 -2 - 1389 FIG00848225: hypothetical protein - none -
fig|6666666.67468.peg.1690 CDS gi|344044881|gb|AFYA01000009.1| 138924 138655 -3 - 270 ACT domain protein - none -
fig|6666666.67468.peg.1691 CDS gi|344044881|gb|AFYA01000009.1| 139022 139234 2 + 213 FIG00546949: hypothetical protein - none -
fig|6666666.67468.peg.1692 CDS gi|344044881|gb|AFYA01000009.1| 139255 139920 1 + 666 FIG00545571: hypothetical protein - none -
fig|6666666.67468.peg.1693 CDS gi|344044881|gb|AFYA01000009.1| 140671 139913 -1 - 759 GMP synthase - none -
fig|6666666.67468.peg.1694 CDS gi|344044881|gb|AFYA01000009.1| 141286 140720 -1 - 567 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.1695 CDS gi|344044881|gb|AFYA01000009.1| 144293 141474 -2 - 2820 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67468.peg.1696 CDS gi|344044881|gb|AFYA01000009.1| 144659 145159 2 + 501 FIG00545300: hypothetical protein - none -
fig|6666666.67468.peg.1697 CDS gi|344044881|gb|AFYA01000009.1| 145668 147500 3 + 1833 cell wall-associated hydrolase - none -
fig|6666666.67468.peg.1698 CDS gi|344044881|gb|AFYA01000009.1| 147574 148686 1 + 1113 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.1699 CDS gi|344044881|gb|AFYA01000009.1| 149468 148683 -2 - 786 FIG00546138: hypothetical protein - none -
fig|6666666.67468.peg.1700 CDS gi|344044881|gb|AFYA01000009.1| 149515 150360 1 + 846 FIG00544636: hypothetical protein - none -
fig|6666666.67468.peg.1701 CDS gi|344044881|gb|AFYA01000009.1| 150426 150854 3 + 429 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.67468.peg.1702 CDS gi|344044881|gb|AFYA01000009.1| 150907 152205 1 + 1299 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67468.peg.1703 CDS gi|344044881|gb|AFYA01000009.1| 152416 152538 1 + 123 hypothetical protein - none -
fig|6666666.67468.peg.1704 CDS gi|344044881|gb|AFYA01000009.1| 153194 152595 -2 - 600 FIG00545282: hypothetical protein - none -
fig|6666666.67468.peg.1705 CDS gi|344044881|gb|AFYA01000009.1| 154053 153289 -3 - 765 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.67468.peg.1706 CDS gi|344044881|gb|AFYA01000009.1| 154294 156144 1 + 1851 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67468.peg.1707 CDS gi|344044881|gb|AFYA01000009.1| 156148 158361 1 + 2214 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67468.peg.1708 CDS gi|344044881|gb|AFYA01000009.1| 158354 159445 2 + 1092 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67468.peg.1709 CDS gi|344044881|gb|AFYA01000009.1| 160358 159747 -2 - 612 FIG00544509: hypothetical protein - none -
fig|6666666.67468.peg.1710 CDS gi|344044881|gb|AFYA01000009.1| 161990 163600 2 + 1611 FIG00544414: hypothetical protein - none -
fig|6666666.67468.peg.1711 CDS gi|344044881|gb|AFYA01000009.1| 163601 165400 2 + 1800 ABC transporter TetB - none -
fig|6666666.67468.peg.1712 CDS gi|344044881|gb|AFYA01000009.1| 165447 165980 3 + 534 Phospholipid-binding protein - none -
fig|6666666.67468.peg.1713 CDS gi|344044881|gb|AFYA01000009.1| 165997 166431 1 + 435 FIG00543853: hypothetical protein - none -
fig|6666666.67468.peg.1714 CDS gi|344044881|gb|AFYA01000009.1| 166992 167249 3 + 258 FIG00547571: hypothetical protein - none -
fig|6666666.67468.peg.1715 CDS gi|344044881|gb|AFYA01000009.1| 168485 167370 -2 - 1116 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67468.peg.1716 CDS gi|344044881|gb|AFYA01000009.1| 169408 168497 -1 - 912 FIG00545923: hypothetical protein - none -
fig|6666666.67468.peg.1717 CDS gi|344044881|gb|AFYA01000009.1| 170516 169560 -2 - 957 putative oxidoreductase - none -
fig|6666666.67468.peg.1718 CDS gi|344044881|gb|AFYA01000009.1| 170554 171435 1 + 882 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67468.peg.1719 CDS gi|344044881|gb|AFYA01000009.1| 171643 172905 1 + 1263 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67468.peg.1720 CDS gi|344044881|gb|AFYA01000009.1| 172930 173310 1 + 381 FIG00543988: hypothetical protein - none -
fig|6666666.67468.peg.1721 CDS gi|344044881|gb|AFYA01000009.1| 174121 173480 -1 - 642 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67468.peg.1722 CDS gi|344044881|gb|AFYA01000009.1| 174619 174197 -1 - 423 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67468.peg.1723 CDS gi|344044881|gb|AFYA01000009.1| 175748 174636 -2 - 1113 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67468.peg.1724 CDS gi|344044881|gb|AFYA01000009.1| 176069 176188 2 + 120 hypothetical protein - none -
fig|6666666.67468.peg.1725 CDS gi|344044881|gb|AFYA01000009.1| 176188 177213 1 + 1026 monooxygenase, putative - none -
fig|6666666.67468.peg.1726 CDS gi|344044881|gb|AFYA01000009.1| 177772 177236 -1 - 537 FIG00546048: hypothetical protein - none -
fig|6666666.67468.peg.1727 CDS gi|344044881|gb|AFYA01000009.1| 177916 181581 1 + 3666 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.67468.peg.1728 CDS gi|344044881|gb|AFYA01000009.1| 181647 182342 3 + 696 HAD-superfamily hydrolase, subfamily IA, variant 3 - none -
fig|6666666.67468.peg.1729 CDS gi|344044881|gb|AFYA01000009.1| 182426 182689 2 + 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1730 CDS gi|344044881|gb|AFYA01000009.1| 182706 183551 3 + 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1731 CDS gi|344044881|gb|AFYA01000009.1| 183662 185242 2 + 1581 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67468.peg.1732 CDS gi|344044881|gb|AFYA01000009.1| 185671 186882 1 + 1212 FIG00544406: hypothetical protein - none -
fig|6666666.67468.peg.1733 CDS gi|344044881|gb|AFYA01000009.1| 187295 187035 -2 - 261 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.67468.peg.1734 CDS gi|344044881|gb|AFYA01000009.1| 188345 187509 -2 - 837 RecB family exonuclease - none -
fig|6666666.67468.peg.1735 CDS gi|344044881|gb|AFYA01000009.1| 188444 189706 2 + 1263 aspartyl aminopeptidase - none -
fig|6666666.67468.peg.1736 CDS gi|344044881|gb|AFYA01000009.1| 189752 190588 2 + 837 RNA methyltransferase - none -
fig|6666666.67468.peg.1737 CDS gi|344044881|gb|AFYA01000009.1| 190621 192204 1 + 1584 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67468.peg.1738 CDS gi|344044881|gb|AFYA01000009.1| 192205 193749 1 + 1545 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67468.peg.1739 CDS gi|344044881|gb|AFYA01000009.1| 194016 194210 3 + 195 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67468.peg.1740 CDS gi|344044881|gb|AFYA01000009.1| 194216 195664 2 + 1449 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67468.peg.1741 CDS gi|344044881|gb|AFYA01000009.1| 195689 196663 2 + 975 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67468.peg.1742 CDS gi|344044881|gb|AFYA01000009.1| 196666 197649 1 + 984 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67468.peg.1743 CDS gi|344044881|gb|AFYA01000009.1| 197770 198126 1 + 357 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67468.peg.1744 CDS gi|344044881|gb|AFYA01000009.1| 198236 199264 2 + 1029 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67468.peg.1745 CDS gi|344044881|gb|AFYA01000009.1| 199290 202079 3 + 2790 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67468.peg.1746 CDS gi|344044881|gb|AFYA01000009.1| 202734 202093 -3 - 642 FIG00545318: hypothetical protein - none -
fig|6666666.67468.peg.1747 CDS gi|344044881|gb|AFYA01000009.1| 202764 203903 3 + 1140 probable metallopeptidase - none -
fig|6666666.67468.peg.1748 CDS gi|344044881|gb|AFYA01000009.1| 203900 204640 2 + 741 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67468.peg.1749 CDS gi|344044881|gb|AFYA01000009.1| 205334 205209 -2 - 126 hypothetical protein - none -
fig|6666666.67468.peg.1750 CDS gi|344044881|gb|AFYA01000009.1| 205720 208449 1 + 2730 hypothetical protein - none -
fig|6666666.67468.peg.1751 CDS gi|344044881|gb|AFYA01000009.1| 209265 210545 3 + 1281 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.67468.peg.1752 CDS gi|344044881|gb|AFYA01000009.1| 211287 210511 -3 - 777 Cobalamin biosynthesis protein CobG - none -
fig|6666666.67468.peg.1753 CDS gi|344044881|gb|AFYA01000009.1| 211395 212633 3 + 1239 FIG00544398: hypothetical protein - none -
fig|6666666.67468.peg.1754 CDS gi|344044881|gb|AFYA01000009.1| 213016 213579 1 + 564 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67468.peg.1755 CDS gi|344044881|gb|AFYA01000009.1| 213580 215217 1 + 1638 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67468.peg.1756 CDS gi|344044881|gb|AFYA01000009.1| 215250 216062 3 + 813 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67468.peg.1757 CDS gi|344044881|gb|AFYA01000009.1| 216810 216412 -3 - 399 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67468.peg.1758 CDS gi|344044881|gb|AFYA01000009.1| 217187 217351 2 + 165 FIG00546737: hypothetical protein - none -
fig|6666666.67468.peg.1759 CDS gi|344044881|gb|AFYA01000009.1| 217351 218103 1 + 753 Putative secreted protein - none -
fig|6666666.67468.peg.1760 CDS gi|344044881|gb|AFYA01000009.1| 218107 218298 1 + 192 FIG00546418: hypothetical protein - none -
fig|6666666.67468.peg.1761 CDS gi|344044881|gb|AFYA01000009.1| 218503 219120 1 + 618 putative secreted protein - none -
fig|6666666.67468.peg.1762 CDS gi|344044881|gb|AFYA01000009.1| 220600 219212 -1 - 1389 Sulfate permease Cysteine Biosynthesis
fig|6666666.67468.peg.1763 CDS gi|344044881|gb|AFYA01000009.1| 221612 220947 -2 - 666 FIG00547576: hypothetical protein - none -
fig|6666666.67468.peg.1764 CDS gi|344044881|gb|AFYA01000009.1| 222718 222233 -1 - 486 hypothetical protein - none -
fig|6666666.67468.peg.1765 CDS gi|344044881|gb|AFYA01000009.1| 223784 222786 -2 - 999 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67468.peg.1766 CDS gi|344044881|gb|AFYA01000009.1| 224406 223834 -3 - 573 FIG00545814: hypothetical protein - none -
fig|6666666.67468.peg.1767 CDS gi|344044881|gb|AFYA01000009.1| 224747 225223 2 + 477 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.67468.peg.1768 CDS gi|344044881|gb|AFYA01000009.1| 225495 226883 3 + 1389 putative transport protein - none -
fig|6666666.67468.peg.1769 CDS gi|344044881|gb|AFYA01000009.1| 228211 226895 -1 - 1317 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67468.peg.1770 CDS gi|344044881|gb|AFYA01000009.1| 228633 230036 3 + 1404 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1771 CDS gi|344044881|gb|AFYA01000009.1| 230265 231071 3 + 807 Hydroxyethylthiazole kinase (EC 2.7.1.50) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67468.peg.1772 CDS gi|344044881|gb|AFYA01000009.1| 231079 233370 1 + 2292 Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
5-FCL-like protein;
Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.67468.peg.1773 CDS gi|344044881|gb|AFYA01000009.1| 233526 234227 3 + 702 FIG00546289: hypothetical protein - none -
fig|6666666.67468.peg.1774 CDS gi|344044881|gb|AFYA01000009.1| 234268 234633 1 + 366 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1775 CDS gi|344044881|gb|AFYA01000009.1| 234664 235323 1 + 660 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1776 CDS gi|344044881|gb|AFYA01000009.1| 235357 236163 1 + 807 Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1777 CDS gi|344044881|gb|AFYA01000009.1| 236160 236966 3 + 807 Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1778 CDS gi|344044881|gb|AFYA01000009.1| 236963 237811 2 + 849 Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67468.peg.1779 CDS gi|344044881|gb|AFYA01000009.1| 237783 238664 3 + 882 transcriptional regulator - none -
fig|6666666.67468.peg.1780 CDS gi|344044881|gb|AFYA01000009.1| 239409 238666 -3 - 744 FIG00543935: hypothetical protein - none -
fig|6666666.67468.peg.1781 CDS gi|344044881|gb|AFYA01000009.1| 240149 239406 -2 - 744 ABC-type transporter, ATPase component - none -
fig|6666666.67468.peg.1782 CDS gi|344044881|gb|AFYA01000009.1| 240775 240191 -1 - 585 FIG00544791: hypothetical protein - none -
fig|6666666.67468.peg.1783 CDS gi|344044881|gb|AFYA01000009.1| 241257 240793 -3 - 465 FIG00544657: hypothetical protein - none -
fig|6666666.67468.peg.1784 CDS gi|344044881|gb|AFYA01000009.1| 241398 242852 3 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67468.peg.1785 CDS gi|344044881|gb|AFYA01000009.1| 243704 242967 -2 - 738 hypothetical protein - none -
fig|6666666.67468.peg.1786 CDS gi|344044881|gb|AFYA01000009.1| 243860 245206 2 + 1347 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67468.peg.1787 CDS gi|344044881|gb|AFYA01000009.1| 245316 246659 3 + 1344 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67468.peg.1788 CDS gi|344044881|gb|AFYA01000009.1| 246656 247720 2 + 1065 FIG00546228: hypothetical protein - none -
fig|6666666.67468.peg.1789 CDS gi|344044881|gb|AFYA01000009.1| 247777 248625 1 + 849 FIG00545058: hypothetical protein - none -
fig|6666666.67468.peg.1790 CDS gi|344044881|gb|AFYA01000009.1| 248690 250141 2 + 1452 Putative secreted protein - none -
fig|6666666.67468.peg.1791 CDS gi|344044881|gb|AFYA01000009.1| 250447 250761 1 + 315 hypothetical protein - none -
fig|6666666.67468.peg.1792 CDS gi|344044881|gb|AFYA01000009.1| 251419 250844 -1 - 576 FIG00544641: hypothetical protein - none -
fig|6666666.67468.peg.1793 CDS gi|344044881|gb|AFYA01000009.1| 252233 251598 -2 - 636 FIG00544095: hypothetical protein - none -
fig|6666666.67468.peg.1794 CDS gi|344044881|gb|AFYA01000009.1| 252916 252242 -1 - 675 FIG00545122: hypothetical protein - none -
fig|6666666.67468.peg.1795 CDS gi|344044881|gb|AFYA01000009.1| 252915 253028 3 + 114 hypothetical protein - none -
fig|6666666.67468.peg.1796 CDS gi|344044881|gb|AFYA01000009.1| 253589 253158 -2 - 432 FIG00672531: hypothetical protein - none -
fig|6666666.67468.peg.1797 CDS gi|344044881|gb|AFYA01000009.1| 256020 253729 -3 - 2292 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67468.peg.1798 CDS gi|344044881|gb|AFYA01000009.1| 256213 257394 1 + 1182 hydrolase of the alpha/beta superfamily - none -
fig|6666666.67468.peg.1799 CDS gi|344044881|gb|AFYA01000009.1| 257396 257785 2 + 390 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.67468.peg.1800 CDS gi|344044881|gb|AFYA01000009.1| 258630 260180 3 + 1551 NhaP-type Na+/H+ and K+/H+ antiporter - none -
fig|6666666.67468.peg.1801 CDS gi|344044881|gb|AFYA01000009.1| 260983 260177 -1 - 807 FIG00544366: hypothetical protein - none -
fig|6666666.67468.peg.1802 CDS gi|344044881|gb|AFYA01000009.1| 262713 261022 -3 - 1692 ABC-type transport system ATPase component - none -
fig|6666666.67468.peg.1803 CDS gi|344044881|gb|AFYA01000009.1| 264272 262788 -2 - 1485 putative ABC transporter permease protein - none -
fig|6666666.67468.peg.1804 CDS gi|344044881|gb|AFYA01000009.1| 264428 265243 2 + 816 FIG00545160: hypothetical protein - none -
fig|6666666.67468.peg.1805 CDS gi|344044881|gb|AFYA01000009.1| 265255 265755 1 + 501 FIG00545269: hypothetical protein - none -
fig|6666666.67468.peg.1806 CDS gi|344044881|gb|AFYA01000009.1| 265830 266498 3 + 669 uncharacterized low-complexity protein - none -
fig|6666666.67468.peg.1807 CDS gi|344044881|gb|AFYA01000009.1| 268212 266581 -3 - 1632 GTP-binding protein EngA Universal GTPases
fig|6666666.67468.peg.1808 CDS gi|344044881|gb|AFYA01000009.1| 268919 268209 -2 - 711 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.67468.peg.1809 CDS gi|344044881|gb|AFYA01000009.1| 269878 268916 -1 - 963 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) ## LSU Psi2605 CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67468.peg.1810 CDS gi|344044881|gb|AFYA01000009.1| 270556 269978 -1 - 579 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67468.peg.1811 CDS gi|344044881|gb|AFYA01000009.1| 271447 270578 -1 - 870 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67468.peg.1812 CDS gi|344044881|gb|AFYA01000009.1| 271686 272249 3 + 564 FIG00546511: hypothetical protein - none -
fig|6666666.67468.peg.1813 CDS gi|344044881|gb|AFYA01000009.1| 273424 272459 -1 - 966 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67468.peg.1814 CDS gi|344044881|gb|AFYA01000009.1| 274387 273509 -1 - 879 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67468.peg.1815 CDS gi|344044881|gb|AFYA01000009.1| 274833 276365 3 + 1533 putative ABC transporter permease protein - none -
fig|6666666.67468.peg.1816 CDS gi|344044881|gb|AFYA01000009.1| 277296 276382 -3 - 915 Tyrosine recombinase XerD - none -
fig|6666666.67468.peg.1817 CDS gi|344044881|gb|AFYA01000009.1| 277970 277293 -2 - 678 ADP-ribose pyrophosphatase (EC 3.6.1.13) NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67468.peg.1818 CDS gi|344044881|gb|AFYA01000009.1| 279644 277980 -2 - 1665 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.67468.peg.1819 CDS gi|344044881|gb|AFYA01000009.1| 281011 280046 -1 - 966 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67468.peg.1820 CDS gi|344044881|gb|AFYA01000009.1| 282214 281021 -1 - 1194 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67468.peg.1821 CDS gi|344044881|gb|AFYA01000009.1| 284055 282274 -3 - 1782 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67468.peg.1822 CDS gi|344044881|gb|AFYA01000009.1| 285099 284137 -3 - 963 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67468.peg.1823 CDS gi|344044881|gb|AFYA01000009.1| 285920 285099 -2 - 822 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67468.peg.1824 CDS gi|344044881|gb|AFYA01000009.1| 286126 285962 -1 - 165 FIG00545954: hypothetical protein - none -
fig|6666666.67468.peg.1825 CDS gi|344044881|gb|AFYA01000009.1| 287116 286130 -1 - 987 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67468.peg.1826 CDS gi|344044881|gb|AFYA01000009.1| 288438 287128 -3 - 1311 TPR-repeat-containing protein - none -
fig|6666666.67468.peg.1827 CDS gi|344045136|gb|AFYA01000008.1| 152 39 -2 - 114 hypothetical protein - none -
fig|6666666.67468.peg.1828 CDS gi|344045136|gb|AFYA01000008.1| 1228 188 -1 - 1041 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67468.peg.1829 CDS gi|344045136|gb|AFYA01000008.1| 1248 1742 3 + 495 FIG00544249: hypothetical protein - none -
fig|6666666.67468.peg.1830 CDS gi|344045136|gb|AFYA01000008.1| 1742 2221 2 + 480 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67468.peg.1831 CDS gi|344045136|gb|AFYA01000008.1| 2323 2526 1 + 204 FIG00546156: hypothetical protein - none -
fig|6666666.67468.peg.1832 CDS gi|344045136|gb|AFYA01000008.1| 2813 3148 2 + 336 hypothetical membrane protein - none -
fig|6666666.67468.peg.1833 CDS gi|344045136|gb|AFYA01000008.1| 3240 5645 3 + 2406 putative membrane protein - none -
fig|6666666.67468.peg.1834 CDS gi|344045136|gb|AFYA01000008.1| 5657 6913 2 + 1257 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.1835 CDS gi|344045136|gb|AFYA01000008.1| 7644 6892 -3 - 753 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.1836 CDS gi|344045136|gb|AFYA01000008.1| 7766 8848 2 + 1083 hypothetical malic enzyme protein - none -
fig|6666666.67468.peg.1837 CDS gi|344045136|gb|AFYA01000008.1| 8901 10280 3 + 1380 FIG00544204: hypothetical protein - none -
fig|6666666.67468.peg.1838 CDS gi|344045136|gb|AFYA01000008.1| 10290 11171 3 + 882 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.1839 CDS gi|344045136|gb|AFYA01000008.1| 12157 11165 -1 - 993 FIG00544944: hypothetical protein - none -
fig|6666666.67468.peg.1840 CDS gi|344045136|gb|AFYA01000008.1| 13396 14676 1 + 1281 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67468.peg.1841 CDS gi|344045136|gb|AFYA01000008.1| 14678 15310 2 + 633 FIG00544659: hypothetical protein - none -
fig|6666666.67468.peg.1842 CDS gi|344045136|gb|AFYA01000008.1| 15512 17614 2 + 2103 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67468.peg.1843 CDS gi|344045136|gb|AFYA01000008.1| 17723 18034 2 + 312 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67468.peg.1844 CDS gi|344045136|gb|AFYA01000008.1| 18138 18794 3 + 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67468.peg.1845 CDS gi|344045136|gb|AFYA01000008.1| 19359 19228 -3 - 132 hypothetical protein - none -
fig|6666666.67468.peg.1846 CDS gi|344045136|gb|AFYA01000008.1| 19546 20535 1 + 990 hypothetical protein - none -
fig|6666666.67468.peg.1847 CDS gi|344045136|gb|AFYA01000008.1| 21137 25102 2 + 3966 Non-ribosomal peptide synthetase, terminal component - none -
fig|6666666.67468.peg.1848 CDS gi|344045136|gb|AFYA01000008.1| 25099 26550 1 + 1452 hypothetical protein - none -
fig|6666666.67468.peg.1849 CDS gi|344045136|gb|AFYA01000008.1| 27423 26671 -3 - 753 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67468.peg.1850 CDS gi|344045136|gb|AFYA01000008.1| 28694 27423 -2 - 1272 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67468.peg.1851 CDS gi|344045136|gb|AFYA01000008.1| 29806 28724 -1 - 1083 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.67468.peg.1852 CDS gi|344045136|gb|AFYA01000008.1| 32037 30187 -3 - 1851 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67468.peg.1853 CDS gi|344045136|gb|AFYA01000008.1| 32680 37491 1 + 4812 hypothetical protein - none -
fig|6666666.67468.peg.1854 CDS gi|344045136|gb|AFYA01000008.1| 37561 37698 1 + 138 hypothetical protein - none -
fig|6666666.67468.peg.1855 CDS gi|344045136|gb|AFYA01000008.1| 38128 37784 -1 - 345 hypothetical protein - none -
fig|6666666.67468.peg.1856 CDS gi|344045136|gb|AFYA01000008.1| 38413 38526 1 + 114 hypothetical protein - none -
fig|6666666.67468.peg.1857 CDS gi|344045136|gb|AFYA01000008.1| 39513 38794 -3 - 720 FIG00544278: hypothetical protein - none -
fig|6666666.67468.peg.1858 CDS gi|344045136|gb|AFYA01000008.1| 39910 41175 1 + 1266 Aspartokinase (EC 2.7.2.4) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67468.peg.1859 CDS gi|344045136|gb|AFYA01000008.1| 41199 42233 3 + 1035 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67468.peg.1860 CDS gi|344045136|gb|AFYA01000008.1| 42298 43734 1 + 1437 hypothetical membrane protein - none -
fig|6666666.67468.peg.1861 CDS gi|344045136|gb|AFYA01000008.1| 44663 44082 -2 - 582 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.67468.peg.1862 CDS gi|344045136|gb|AFYA01000008.1| 44867 46417 2 + 1551 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67468.peg.1863 CDS gi|344045136|gb|AFYA01000008.1| 46790 46497 -2 - 294 FIG00544731: hypothetical protein - none -
fig|6666666.67468.peg.1864 CDS gi|344045136|gb|AFYA01000008.1| 47297 46842 -2 - 456 transcriptional regulator - none -
fig|6666666.67468.peg.1865 CDS gi|344045136|gb|AFYA01000008.1| 47372 48127 2 + 756 Branched-chain amino acid transport protein - none -
fig|6666666.67468.peg.1866 CDS gi|344045136|gb|AFYA01000008.1| 48124 48450 1 + 327 hypothetical membrane protein - none -
fig|6666666.67468.peg.1867 CDS gi|344045136|gb|AFYA01000008.1| 48820 48527 -1 - 294 FIG00548072: hypothetical protein - none -
fig|6666666.67468.peg.1868 CDS gi|344045136|gb|AFYA01000008.1| 49275 48928 -3 - 348 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.67468.peg.1869 CDS gi|344045136|gb|AFYA01000008.1| 49402 50439 1 + 1038 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67468.peg.1870 CDS gi|344045136|gb|AFYA01000008.1| 50436 50825 3 + 390 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67468.peg.1871 CDS gi|344045136|gb|AFYA01000008.1| 51209 50889 -2 - 321 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67468.peg.1872 CDS gi|344045136|gb|AFYA01000008.1| 51482 51210 -2 - 273 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67468.peg.1873 CDS gi|344045136|gb|AFYA01000008.1| 51944 51489 -2 - 456 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67468.peg.1874 CDS gi|344045136|gb|AFYA01000008.1| 53476 51944 -1 - 1533 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67468.peg.1875 CDS gi|344045136|gb|AFYA01000008.1| 53860 53477 -1 - 384 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67468.peg.1876 CDS gi|344045136|gb|AFYA01000008.1| 56751 53857 -3 - 2895 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67468.peg.1877 CDS gi|344045136|gb|AFYA01000008.1| 56925 58391 3 + 1467 FIG00544507: hypothetical protein - none -
fig|6666666.67468.peg.1878 CDS gi|344045136|gb|AFYA01000008.1| 59114 58353 -2 - 762 Malonate transporter, MadM subunit - none -
fig|6666666.67468.peg.1879 CDS gi|344045136|gb|AFYA01000008.1| 59564 59124 -2 - 441 Malonate transporter, MadL subunit - none -
fig|6666666.67468.peg.1880 CDS gi|344045136|gb|AFYA01000008.1| 59737 60723 1 + 987 LysR family transcriptional regulator Bsu YybE - none -
fig|6666666.67468.peg.1881 CDS gi|344045136|gb|AFYA01000008.1| 61618 60692 -1 - 927 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.1882 CDS gi|344045136|gb|AFYA01000008.1| 62250 61621 -3 - 630 Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-) - none -
fig|6666666.67468.peg.1883 CDS gi|344045136|gb|AFYA01000008.1| 63011 62244 -2 - 768 Malonate decarboxylase gamma subunit - none -
fig|6666666.67468.peg.1884 CDS gi|344045136|gb|AFYA01000008.1| 64148 63021 -2 - 1128 Malonate decarboxylase beta subunit - none -
fig|6666666.67468.peg.1885 CDS gi|344045136|gb|AFYA01000008.1| 64992 64135 -3 - 858 Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) - none -
fig|6666666.67468.peg.1886 CDS gi|344045136|gb|AFYA01000008.1| 66659 64998 -2 - 1662 Malonate decarboxylase alpha subunit - none -
fig|6666666.67468.peg.1887 CDS gi|344045136|gb|AFYA01000008.1| 67409 66741 -2 - 669 two-component system, response regulator - none -
fig|6666666.67468.peg.1888 CDS gi|344045136|gb|AFYA01000008.1| 68856 67387 -3 - 1470 putative sensor kinase - none -
fig|6666666.67468.peg.1889 CDS gi|344045136|gb|AFYA01000008.1| 69235 68882 -1 - 354 FIG00549298: hypothetical protein - none -
fig|6666666.67468.peg.1890 CDS gi|344045136|gb|AFYA01000008.1| 69417 70037 3 + 621 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67468.peg.1891 CDS gi|344045136|gb|AFYA01000008.1| 71119 70211 -1 - 909 putative secreted protein - none -
fig|6666666.67468.peg.1892 CDS gi|344045136|gb|AFYA01000008.1| 71156 71611 2 + 456 Transamidase GatB domain protein - none -
fig|6666666.67468.peg.1893 CDS gi|344045136|gb|AFYA01000008.1| 74005 71618 -1 - 2388 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67468.peg.1894 CDS gi|344045136|gb|AFYA01000008.1| 74612 74962 2 + 351 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67468.peg.1895 CDS gi|344045136|gb|AFYA01000008.1| 75201 75356 3 + 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67468.peg.1896 CDS gi|344045136|gb|AFYA01000008.1| 75362 75823 2 + 462 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67468.peg.1897 CDS gi|344045136|gb|AFYA01000008.1| 77254 75899 -1 - 1356 Permeases of the major facilitator superfamily - none -
fig|6666666.67468.peg.1898 CDS gi|344045136|gb|AFYA01000008.1| 78825 77293 -3 - 1533 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67468.peg.1899 CDS gi|344045136|gb|AFYA01000008.1| 79546 79079 -1 - 468 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.1900 CDS gi|344045136|gb|AFYA01000008.1| 79737 80672 3 + 936 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.1901 CDS gi|344045136|gb|AFYA01000008.1| 80703 81647 3 + 945 PROBABLE ANTIBIOTIC-RESISTANCE PROTEIN - none -
fig|6666666.67468.peg.1902 CDS gi|344045136|gb|AFYA01000008.1| 81640 82836 1 + 1197 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.67468.peg.1903 CDS gi|344045136|gb|AFYA01000008.1| 82858 83331 1 + 474 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.67468.peg.1904 CDS gi|344045136|gb|AFYA01000008.1| 83428 84273 1 + 846 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67468.peg.1905 CDS gi|344045136|gb|AFYA01000008.1| 85032 84349 -3 - 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67468.peg.1906 CDS gi|344045136|gb|AFYA01000008.1| 85479 85294 -3 - 186 FIG00546237: hypothetical protein - none -
fig|6666666.67468.peg.1907 CDS gi|344045136|gb|AFYA01000008.1| 85558 86307 1 + 750 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67468.peg.1908 CDS gi|344045136|gb|AFYA01000008.1| 86315 86875 2 + 561 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.67468.peg.1909 CDS gi|344045136|gb|AFYA01000008.1| 86868 87611 3 + 744 FIG01193531: hypothetical protein - none -
fig|6666666.67468.peg.1910 CDS gi|344045136|gb|AFYA01000008.1| 87702 88898 3 + 1197 putative serine protease - none -
fig|6666666.67468.peg.1911 CDS gi|344045136|gb|AFYA01000008.1| 90461 89466 -2 - 996 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.67468.peg.1912 CDS gi|344045136|gb|AFYA01000008.1| 91027 90476 -1 - 552 FIG00544230: hypothetical protein - none -
fig|6666666.67468.peg.1913 CDS gi|344045136|gb|AFYA01000008.1| 92034 91192 -3 - 843 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67468.peg.1914 CDS gi|344045136|gb|AFYA01000008.1| 92515 93576 1 + 1062 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.67468.peg.1915 CDS gi|344045136|gb|AFYA01000008.1| 93573 94706 3 + 1134 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.67468.peg.1916 CDS gi|344045136|gb|AFYA01000008.1| 94829 95467 2 + 639 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.67468.peg.1917 CDS gi|344045136|gb|AFYA01000008.1| 95464 96039 1 + 576 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.67468.peg.1918 CDS gi|344045136|gb|AFYA01000008.1| 96063 96263 3 + 201 FIG043778: hypothetical protein CBSS-336982.3.peg.3874
fig|6666666.67468.peg.1919 CDS gi|344045136|gb|AFYA01000008.1| 96267 96587 3 + 321 FIG00544831: hypothetical protein - none -
fig|6666666.67468.peg.1920 CDS gi|344045136|gb|AFYA01000008.1| 96610 96909 1 + 300 FIG00545374: hypothetical protein - none -
fig|6666666.67468.peg.1921 CDS gi|344045136|gb|AFYA01000008.1| 99261 96904 -3 - 2358 FIG00545284: hypothetical protein - none -
fig|6666666.67468.peg.1922 CDS gi|344045136|gb|AFYA01000008.1| 99578 99781 2 + 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67468.peg.1923 CDS gi|344045136|gb|AFYA01000008.1| 100405 100286 -1 - 120 hypothetical protein - none -
fig|6666666.67468.peg.1924 CDS gi|344045136|gb|AFYA01000008.1| 100445 103459 2 + 3015 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67468.peg.1925 CDS gi|344045136|gb|AFYA01000008.1| 103463 104176 2 + 714 FIG00544520: hypothetical protein - none -
fig|6666666.67468.peg.1926 CDS gi|344045136|gb|AFYA01000008.1| 105696 104251 -3 - 1446 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67468.peg.1927 CDS gi|344045136|gb|AFYA01000008.1| 105887 107101 2 + 1215 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67468.peg.1928 CDS gi|344045136|gb|AFYA01000008.1| 107912 107460 -2 - 453 hypothetical protein - none -
fig|6666666.67468.peg.1929 CDS gi|344045136|gb|AFYA01000008.1| 108246 108809 3 + 564 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67468.peg.1930 CDS gi|344045136|gb|AFYA01000008.1| 108906 109709 3 + 804 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67468.peg.1931 CDS gi|344045136|gb|AFYA01000008.1| 110130 112166 3 + 2037 FIG00546273: hypothetical protein - none -
fig|6666666.67468.peg.1932 CDS gi|344045136|gb|AFYA01000008.1| 112219 113325 1 + 1107 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.67468.peg.1933 CDS gi|344045136|gb|AFYA01000008.1| 113326 113961 1 + 636 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.67468.peg.1934 CDS gi|344045136|gb|AFYA01000008.1| 113991 114662 3 + 672 short chain dehydrogenase - none -
fig|6666666.67468.peg.1935 CDS gi|344045136|gb|AFYA01000008.1| 114770 115981 2 + 1212 FIG00547211: hypothetical protein - none -
fig|6666666.67468.peg.1936 CDS gi|344045136|gb|AFYA01000008.1| 115994 116938 2 + 945 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67468.peg.1937 CDS gi|344045244|gb|AFYA01000007.1| 641 264 -2 - 378 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67468.peg.1938 CDS gi|344045244|gb|AFYA01000007.1| 1348 638 -1 - 711 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67468.peg.1939 CDS gi|344045244|gb|AFYA01000007.1| 1428 2450 3 + 1023 FIG00547241: hypothetical protein - none -
fig|6666666.67468.peg.1940 CDS gi|344045244|gb|AFYA01000007.1| 2489 3526 2 + 1038 FIG00545756: hypothetical protein - none -
fig|6666666.67468.peg.1941 CDS gi|344045244|gb|AFYA01000007.1| 3685 5727 1 + 2043 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67468.peg.1942 CDS gi|344045244|gb|AFYA01000007.1| 6584 6315 -2 - 270 Zn-dependent alcohol dehydrogenase - none -
fig|6666666.67468.peg.1943 CDS gi|344045244|gb|AFYA01000007.1| 7405 6545 -1 - 861 Zn-dependent alcohol dehydrogenase - none -
fig|6666666.67468.peg.1944 CDS gi|344045244|gb|AFYA01000007.1| 8338 7481 -1 - 858 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67468.peg.1945 CDS gi|344045244|gb|AFYA01000007.1| 9694 8339 -1 - 1356 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.67468.peg.1946 CDS gi|344045244|gb|AFYA01000007.1| 10713 9694 -3 - 1020 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67468.peg.1947 CDS gi|344045244|gb|AFYA01000007.1| 11332 10751 -1 - 582 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67468.peg.1948 CDS gi|344045244|gb|AFYA01000007.1| 12068 12973 2 + 906 periplasmic component of ABC-type Fe3+-siderophore transport system - none -
fig|6666666.67468.peg.1949 CDS gi|344045244|gb|AFYA01000007.1| 13720 13079 -1 - 642 FIG00546965: hypothetical protein - none -
fig|6666666.67468.peg.1950 CDS gi|344045244|gb|AFYA01000007.1| 15191 13929 -2 - 1263 FIG00548230: hypothetical protein - none -
fig|6666666.67468.peg.1951 CDS gi|344045244|gb|AFYA01000007.1| 16573 15191 -1 - 1383 aminopeptidase N - none -
fig|6666666.67468.peg.1952 CDS gi|344045244|gb|AFYA01000007.1| 18591 16579 -3 - 2013 serine protease - none -
fig|6666666.67468.peg.1953 CDS gi|344045244|gb|AFYA01000007.1| 19160 18660 -2 - 501 hypothetical protein - none -
fig|6666666.67468.peg.1954 CDS gi|344045244|gb|AFYA01000007.1| 19304 19609 2 + 306 hypothetical protein - none -
fig|6666666.67468.peg.1955 CDS gi|344045244|gb|AFYA01000007.1| 20253 19762 -3 - 492 hypothetical protein - none -
fig|6666666.67468.peg.1956 CDS gi|344045244|gb|AFYA01000007.1| 20949 20467 -3 - 483 hypothetical protein - none -
fig|6666666.67468.peg.1957 CDS gi|344045244|gb|AFYA01000007.1| 21572 21291 -2 - 282 hypothetical protein - none -
fig|6666666.67468.peg.1958 CDS gi|344045244|gb|AFYA01000007.1| 22203 21727 -3 - 477 hypothetical protein - none -
fig|6666666.67468.peg.1959 CDS gi|344045244|gb|AFYA01000007.1| 23119 22556 -1 - 564 FIG00547290: hypothetical protein - none -
fig|6666666.67468.peg.1960 CDS gi|344045244|gb|AFYA01000007.1| 24688 23594 -1 - 1095 hypothetical membrane protein - none -
fig|6666666.67468.peg.1961 CDS gi|344045244|gb|AFYA01000007.1| 25934 24837 -2 - 1098 FIG00545251: hypothetical protein - none -
fig|6666666.67468.peg.1962 CDS gi|344045244|gb|AFYA01000007.1| 27225 28568 3 + 1344 hypothetical protein - none -
fig|6666666.67468.peg.1963 CDS gi|344045244|gb|AFYA01000007.1| 29186 29392 2 + 207 Transposase - none -
fig|6666666.67468.peg.1964 CDS gi|344045244|gb|AFYA01000007.1| 29819 31216 2 + 1398 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.67468.peg.1965 CDS gi|344045244|gb|AFYA01000007.1| 31209 31814 3 + 606 putative protein tyrosine phosphatase - none -
fig|6666666.67468.peg.1966 CDS gi|344045244|gb|AFYA01000007.1| 31814 32788 2 + 975 FIG00546220: hypothetical protein - none -
fig|6666666.67468.peg.1967 CDS gi|344045244|gb|AFYA01000007.1| 32779 34593 1 + 1815 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.67468.peg.1968 CDS gi|344045244|gb|AFYA01000007.1| 34594 35751 1 + 1158 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase N-linked Glycosylation in Bacteria
fig|6666666.67468.peg.1969 CDS gi|344045244|gb|AFYA01000007.1| 35810 36358 2 + 549 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.67468.peg.1970 CDS gi|344045244|gb|AFYA01000007.1| 36793 37017 1 + 225 Acetyltransferase (isoleucine patch superfamily) - none -
fig|6666666.67468.peg.1971 CDS gi|344045244|gb|AFYA01000007.1| 37168 38442 1 + 1275 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67468.peg.1972 CDS gi|344045244|gb|AFYA01000007.1| 39154 40356 1 + 1203 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67468.peg.1973 CDS gi|344045244|gb|AFYA01000007.1| 40523 41761 2 + 1239 hypothetical protein - none -
fig|6666666.67468.peg.1974 CDS gi|344045244|gb|AFYA01000007.1| 42551 43387 2 + 837 hypothetical protein - none -
fig|6666666.67468.peg.1975 CDS gi|344045244|gb|AFYA01000007.1| 43870 43983 1 + 114 hypothetical protein - none -
fig|6666666.67468.peg.1976 CDS gi|344045244|gb|AFYA01000007.1| 44130 45539 3 + 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
TCA Cycle
fig|6666666.67468.peg.1977 CDS gi|344045244|gb|AFYA01000007.1| 45696 46619 3 + 924 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67468.peg.1978 CDS gi|344045244|gb|AFYA01000007.1| 46668 47189 3 + 522 Transcriptional regulator - none -
fig|6666666.67468.peg.1979 CDS gi|344045244|gb|AFYA01000007.1| 48585 47308 -3 - 1278 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.67468.peg.1980 CDS gi|344045244|gb|AFYA01000007.1| 48856 48969 1 + 114 hypothetical protein - none -
fig|6666666.67468.peg.1981 CDS gi|344045244|gb|AFYA01000007.1| 49229 50002 2 + 774 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67468.peg.1982 CDS gi|344045244|gb|AFYA01000007.1| 50019 52040 3 + 2022 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67468.peg.1983 CDS gi|344045244|gb|AFYA01000007.1| 52040 52789 2 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67468.peg.1984 CDS gi|344045244|gb|AFYA01000007.1| 52839 53177 3 + 339 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.67468.peg.1985 CDS gi|344045244|gb|AFYA01000007.1| 53295 53423 3 + 129 hypothetical protein - none -
fig|6666666.67468.peg.1986 CDS gi|344045244|gb|AFYA01000007.1| 53437 53718 1 + 282 hypothetical protein - none -
fig|6666666.67468.peg.1987 CDS gi|344045244|gb|AFYA01000007.1| 54825 53848 -3 - 978 FIG00547005: hypothetical protein - none -
fig|6666666.67468.peg.1988 CDS gi|344045244|gb|AFYA01000007.1| 54897 56201 3 + 1305 FIG00544632: hypothetical protein - none -
fig|6666666.67468.peg.1989 CDS gi|344045244|gb|AFYA01000007.1| 56217 56639 3 + 423 FIG00545952: hypothetical protein - none -
fig|6666666.67468.peg.1990 CDS gi|344045244|gb|AFYA01000007.1| 56658 56963 3 + 306 FIG00544086: hypothetical protein - none -
fig|6666666.67468.peg.1991 CDS gi|344045244|gb|AFYA01000007.1| 57116 57769 2 + 654 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.1992 CDS gi|344045244|gb|AFYA01000007.1| 57766 59415 1 + 1650 Permeases of the major facilitator superfamily - none -
fig|6666666.67468.peg.1993 CDS gi|344045244|gb|AFYA01000007.1| 59415 61049 3 + 1635 Permeases of the major facilitator superfamily - none -
fig|6666666.67468.peg.1994 CDS gi|344045244|gb|AFYA01000007.1| 62035 61121 -1 - 915 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.67468.peg.1995 CDS gi|344045244|gb|AFYA01000007.1| 62090 62764 2 + 675 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67468.peg.1996 CDS gi|344045244|gb|AFYA01000007.1| 62766 62891 3 + 126 hypothetical protein - none -
fig|6666666.67468.peg.1997 CDS gi|344045244|gb|AFYA01000007.1| 63016 63861 1 + 846 FIG00547928: hypothetical protein - none -
fig|6666666.67468.peg.1998 CDS gi|344045244|gb|AFYA01000007.1| 64150 63848 -1 - 303 hypothetical protein - none -
fig|6666666.67468.peg.1999 CDS gi|344045244|gb|AFYA01000007.1| 66417 64150 -3 - 2268 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67468.peg.2000 CDS gi|344045244|gb|AFYA01000007.1| 66918 66466 -3 - 453 hypothetical membrane protein - none -
fig|6666666.67468.peg.2001 CDS gi|344045244|gb|AFYA01000007.1| 67149 68981 3 + 1833 FIG01124361: hypothetical protein - none -
fig|6666666.67468.peg.2002 CDS gi|344045244|gb|AFYA01000007.1| 68990 70069 2 + 1080 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.2003 CDS gi|344045244|gb|AFYA01000007.1| 70070 71146 2 + 1077 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.2004 CDS gi|344045244|gb|AFYA01000007.1| 71147 71977 2 + 831 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.2005 CDS gi|344045244|gb|AFYA01000007.1| 72074 73045 2 + 972 FIG00548629: hypothetical protein - none -
fig|6666666.67468.peg.2006 CDS gi|344045244|gb|AFYA01000007.1| 73241 73921 2 + 681 FIG00549449: hypothetical protein - none -
fig|6666666.67468.peg.2007 CDS gi|344045244|gb|AFYA01000007.1| 74832 74020 -3 - 813 FIG00546356: hypothetical protein - none -
fig|6666666.67468.peg.2008 CDS gi|344045244|gb|AFYA01000007.1| 75731 74916 -2 - 816 Methylase of polypeptide chain release factors - none -
fig|6666666.67468.peg.2009 CDS gi|344045244|gb|AFYA01000007.1| 76235 75732 -2 - 504 FIG00546961: hypothetical protein - none -
fig|6666666.67468.peg.2010 CDS gi|344045244|gb|AFYA01000007.1| 76260 77366 3 + 1107 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67468.peg.2011 CDS gi|344045244|gb|AFYA01000007.1| 77359 77997 1 + 639 FIG00545254: hypothetical protein - none -
fig|6666666.67468.peg.2012 CDS gi|344045244|gb|AFYA01000007.1| 79966 78260 -1 - 1707 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67468.peg.2013 CDS gi|344045244|gb|AFYA01000007.1| 80051 81307 2 + 1257 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67468.peg.2014 CDS gi|344045244|gb|AFYA01000007.1| 81350 82096 2 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67468.peg.2015 CDS gi|344045244|gb|AFYA01000007.1| 82146 83348 3 + 1203 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67468.peg.2016 CDS gi|344045244|gb|AFYA01000007.1| 83345 84043 2 + 699 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67468.peg.2017 CDS gi|344045244|gb|AFYA01000007.1| 85088 85969 2 + 882 FIG00545169: hypothetical protein - none -
fig|6666666.67468.peg.2018 CDS gi|344045244|gb|AFYA01000007.1| 88532 85962 -2 - 2571 FIG00547394: hypothetical protein - none -
fig|6666666.67468.peg.2019 CDS gi|344045244|gb|AFYA01000007.1| 88531 88653 1 + 123 hypothetical protein - none -
fig|6666666.67468.peg.2020 CDS gi|344045244|gb|AFYA01000007.1| 89555 88650 -2 - 906 FIG00543972: hypothetical protein - none -
fig|6666666.67468.peg.2021 CDS gi|344045244|gb|AFYA01000007.1| 89610 90518 3 + 909 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67468.peg.2022 CDS gi|344045244|gb|AFYA01000007.1| 90546 91352 3 + 807 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.67468.peg.2023 CDS gi|344045244|gb|AFYA01000007.1| 91404 92225 3 + 822 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67468.peg.2024 CDS gi|344045244|gb|AFYA01000007.1| 92476 92667 1 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67468.peg.2025 CDS gi|344045244|gb|AFYA01000007.1| 92837 92974 2 + 138 hypothetical protein - none -
fig|6666666.67468.peg.2026 CDS gi|344045244|gb|AFYA01000007.1| 94574 93507 -2 - 1068 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67468.peg.2027 CDS gi|344045244|gb|AFYA01000007.1| 94721 94957 2 + 237 Glutaredoxin-like domain protein - none -
fig|6666666.67468.peg.2028 CDS gi|344045244|gb|AFYA01000007.1| 95088 96437 3 + 1350 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.2029 CDS gi|344045244|gb|AFYA01000007.1| 96439 97347 1 + 909 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.2030 CDS gi|344045244|gb|AFYA01000007.1| 98005 98124 1 + 120 FIG00548314: hypothetical protein - none -
fig|6666666.67468.peg.2031 CDS gi|344045244|gb|AFYA01000007.1| 99012 98128 -3 - 885 FIG00545601: hypothetical protein - none -
fig|6666666.67468.peg.2032 CDS gi|344045244|gb|AFYA01000007.1| 99288 100691 3 + 1404 permease of the major facilitator superfamily - none -
fig|6666666.67468.peg.2033 CDS gi|344045244|gb|AFYA01000007.1| 100727 102583 2 + 1857 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) Pterin carbinolamine dehydratase
fig|6666666.67468.peg.2034 CDS gi|344045244|gb|AFYA01000007.1| 102630 103067 3 + 438 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67468.peg.2035 CDS gi|344045244|gb|AFYA01000007.1| 103082 103933 2 + 852 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.2036 CDS gi|344045244|gb|AFYA01000007.1| 104214 103939 -3 - 276 hypothetical protein - none -
fig|6666666.67468.peg.2037 CDS gi|344045244|gb|AFYA01000007.1| 105898 104846 -1 - 1053 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.2038 CDS gi|344045244|gb|AFYA01000007.1| 107476 105899 -1 - 1578 Ferric iron ABC transporter, permease protein - none -
fig|6666666.67468.peg.2039 CDS gi|344045244|gb|AFYA01000007.1| 108632 107553 -2 - 1080 Fe3+/thiamine transport system, secreted component; ABC transporter substrate-binding protein - none -
fig|6666666.67468.peg.2040 CDS gi|344045244|gb|AFYA01000007.1| 109356 111152 3 + 1797 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.2041 CDS gi|344045244|gb|AFYA01000007.1| 111169 111597 1 + 429 FIG00546920: hypothetical protein - none -
fig|6666666.67468.peg.2042 CDS gi|344045244|gb|AFYA01000007.1| 111686 112705 2 + 1020 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.67468.peg.2043 CDS gi|344045244|gb|AFYA01000007.1| 112741 113319 1 + 579 FIG00543961: hypothetical protein - none -
fig|6666666.67468.peg.2044 CDS gi|344045244|gb|AFYA01000007.1| 113360 113872 2 + 513 TerC family integral membrane protein - none -
fig|6666666.67468.peg.2045 CDS gi|344045244|gb|AFYA01000007.1| 113986 116622 1 + 2637 FUPA26 P-type ATPase - none -
fig|6666666.67468.peg.2046 CDS gi|344045244|gb|AFYA01000007.1| 116691 117815 3 + 1125 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.2047 CDS gi|344045244|gb|AFYA01000007.1| 117831 119177 3 + 1347 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.2048 CDS gi|344045244|gb|AFYA01000007.1| 119276 120589 2 + 1314 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67468.peg.2049 CDS gi|344045244|gb|AFYA01000007.1| 120586 121194 1 + 609 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67468.peg.2050 CDS gi|344045244|gb|AFYA01000007.1| 121201 121824 1 + 624 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67468.peg.2051 CDS gi|344045244|gb|AFYA01000007.1| 121825 122631 1 + 807 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67468.peg.2052 CDS gi|344045244|gb|AFYA01000007.1| 122722 124293 1 + 1572 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67468.peg.2053 CDS gi|344045244|gb|AFYA01000007.1| 124353 125366 3 + 1014 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67468.peg.2054 CDS gi|344045244|gb|AFYA01000007.1| 126174 127025 3 + 852 Hydroxymethylpyrimidine ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.67468.peg.2055 CDS gi|344045244|gb|AFYA01000007.1| 127067 128104 2 + 1038 Hydroxymethylpyrimidine ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.67468.peg.2056 CDS gi|344045244|gb|AFYA01000007.1| 128112 128891 3 + 780 taurine ABC transporter, ATP-binding protein - none -
fig|6666666.67468.peg.2057 CDS gi|344045244|gb|AFYA01000007.1| 128923 130569 1 + 1647 hypothetical protein - none -
fig|6666666.67468.peg.2058 CDS gi|344045244|gb|AFYA01000007.1| 130580 131053 2 + 474 putative YjgF translation initiation inhibitor - none -
fig|6666666.67468.peg.2059 CDS gi|344045244|gb|AFYA01000007.1| 131409 131050 -3 - 360 putative transcription repressor - none -
fig|6666666.67468.peg.2060 CDS gi|344045244|gb|AFYA01000007.1| 131801 131499 -2 - 303 FIG00544106: hypothetical protein - none -
fig|6666666.67468.peg.2061 CDS gi|344045244|gb|AFYA01000007.1| 131980 132231 1 + 252 FIG00544880: hypothetical protein - none -
fig|6666666.67468.peg.2062 CDS gi|344045244|gb|AFYA01000007.1| 133189 132293 -1 - 897 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67468.peg.2063 CDS gi|344045244|gb|AFYA01000007.1| 133329 134195 3 + 867 FIG00544751: hypothetical protein - none -
fig|6666666.67468.peg.2064 CDS gi|344045244|gb|AFYA01000007.1| 135322 134192 -1 - 1131 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67468.peg.2065 CDS gi|344045244|gb|AFYA01000007.1| 135782 135375 -2 - 408 FIG00545647: hypothetical protein - none -
fig|6666666.67468.peg.2066 CDS gi|344045244|gb|AFYA01000007.1| 137429 135867 -2 - 1563 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) Proline, 4-hydroxyproline uptake and utilization;
Xylose utilization
fig|6666666.67468.peg.2067 CDS gi|344045244|gb|AFYA01000007.1| 138376 137426 -1 - 951 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) - none -
fig|6666666.67468.peg.2068 CDS gi|344045244|gb|AFYA01000007.1| 139351 138470 -1 - 882 transcriptional regulator - none -
fig|6666666.67468.peg.2069 CDS gi|344045244|gb|AFYA01000007.1| 139612 139367 -1 - 246 FIG00548504: hypothetical protein - none -
fig|6666666.67468.peg.2070 CDS gi|344045244|gb|AFYA01000007.1| 139601 139735 2 + 135 hypothetical protein - none -
fig|6666666.67468.peg.2071 CDS gi|344045244|gb|AFYA01000007.1| 140583 139831 -3 - 753 PUTATIVE DICARBOXYLIC ACID HYDROLASE - none -
fig|6666666.67468.peg.2072 CDS gi|344045244|gb|AFYA01000007.1| 141006 140587 -3 - 420 FIG00545540: hypothetical protein - none -
fig|6666666.67468.peg.2073 CDS gi|344045244|gb|AFYA01000007.1| 141128 141003 -2 - 126 hypothetical protein - none -
fig|6666666.67468.peg.2074 CDS gi|344045244|gb|AFYA01000007.1| 141488 141294 -2 - 195 hypothetical protein - none -
fig|6666666.67468.peg.2075 CDS gi|344045244|gb|AFYA01000007.1| 141994 141731 -1 - 264 hypothetical protein - none -
fig|6666666.67468.peg.2076 CDS gi|344045244|gb|AFYA01000007.1| 143367 141994 -3 - 1374 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67468.peg.2077 CDS gi|344045244|gb|AFYA01000007.1| 143816 143944 2 + 129 hypothetical protein - none -
fig|6666666.67468.peg.2078 CDS gi|344045244|gb|AFYA01000007.1| 144172 144291 1 + 120 hypothetical protein - none -
fig|6666666.67468.peg.2079 CDS gi|344045244|gb|AFYA01000007.1| 144707 144591 -2 - 117 hypothetical protein - none -
fig|6666666.67468.peg.2080 CDS gi|344045244|gb|AFYA01000007.1| 144757 144873 1 + 117 Transposase subunit B - none -
fig|6666666.67468.peg.2081 CDS gi|344045244|gb|AFYA01000007.1| 146104 145913 -1 - 192 Sulfate permease Cysteine Biosynthesis
fig|6666666.67468.peg.2082 CDS gi|344045244|gb|AFYA01000007.1| 146519 146746 2 + 228 Mobile element protein - none -
fig|6666666.67468.peg.2083 CDS gi|344045244|gb|AFYA01000007.1| 146769 146918 3 + 150 Mobile element protein - none -
fig|6666666.67468.peg.2084 CDS gi|344045244|gb|AFYA01000007.1| 147892 146915 -1 - 978 hypothetical protein - none -
fig|6666666.67468.peg.2085 CDS gi|344045244|gb|AFYA01000007.1| 148627 149385 1 + 759 hypothetical protein - none -
fig|6666666.67468.peg.2086 CDS gi|344045244|gb|AFYA01000007.1| 150314 150427 2 + 114 hypothetical protein - none -
fig|6666666.67468.peg.2087 CDS gi|344045244|gb|AFYA01000007.1| 151602 150940 -3 - 663 hypothetical protein - none -
fig|6666666.67468.peg.2088 CDS gi|344045244|gb|AFYA01000007.1| 151772 151644 -2 - 129 hypothetical protein - none -
fig|6666666.67468.peg.2089 CDS gi|344045244|gb|AFYA01000007.1| 152034 151843 -3 - 192 hypothetical protein - none -
fig|6666666.67468.peg.2090 CDS gi|344045244|gb|AFYA01000007.1| 152249 154081 2 + 1833 hypothetical protein - none -
fig|6666666.67468.peg.2091 CDS gi|344045244|gb|AFYA01000007.1| 154665 154381 -3 - 285 Mobile element protein - none -
fig|6666666.67468.peg.2092 CDS gi|344045397|gb|AFYA01000006.1| 487 122 -1 - 366 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.2093 CDS gi|344045397|gb|AFYA01000006.1| 696 2114 3 + 1419 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67468.peg.2094 CDS gi|344045397|gb|AFYA01000006.1| 3049 2174 -1 - 876 FIG00544174: hypothetical protein - none -
fig|6666666.67468.peg.2095 CDS gi|344045397|gb|AFYA01000006.1| 4117 3743 -1 - 375 Thioredoxin - none -
fig|6666666.67468.peg.2096 CDS gi|344045397|gb|AFYA01000006.1| 4303 4509 1 + 207 hypothetical protein - none -
fig|6666666.67468.peg.2097 CDS gi|344045397|gb|AFYA01000006.1| 4683 6029 3 + 1347 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67468.peg.2098 CDS gi|344045397|gb|AFYA01000006.1| 6171 5989 -3 - 183 FIG00549340: hypothetical protein - none -
fig|6666666.67468.peg.2099 CDS gi|344045397|gb|AFYA01000006.1| 6580 6182 -1 - 399 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67468.peg.2100 CDS gi|344045397|gb|AFYA01000006.1| 6744 6577 -3 - 168 FIG00549609: hypothetical protein - none -
fig|6666666.67468.peg.2101 CDS gi|344045397|gb|AFYA01000006.1| 8505 6973 -3 - 1533 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67468.peg.2102 CDS gi|344045397|gb|AFYA01000006.1| 9565 9113 -1 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67468.peg.2103 CDS gi|344045397|gb|AFYA01000006.1| 10299 9622 -3 - 678 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67468.peg.2104 CDS gi|344045397|gb|AFYA01000006.1| 10623 10336 -3 - 288 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.67468.peg.2105 CDS gi|344045397|gb|AFYA01000006.1| 10895 10752 -2 - 144 putative secreted protein - none -
fig|6666666.67468.peg.2106 CDS gi|344045397|gb|AFYA01000006.1| 11174 10983 -2 - 192 FIG00544411: hypothetical protein - none -
fig|6666666.67468.peg.2107 CDS gi|344045397|gb|AFYA01000006.1| 12631 11171 -1 - 1461 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67468.peg.2108 CDS gi|344045397|gb|AFYA01000006.1| 14839 12677 -1 - 2163 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67468.peg.2109 CDS gi|344045397|gb|AFYA01000006.1| 15107 14931 -2 - 177 FIG00544267: hypothetical protein - none -
fig|6666666.67468.peg.2110 CDS gi|344045397|gb|AFYA01000006.1| 15515 15988 2 + 474 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.2111 CDS gi|344045397|gb|AFYA01000006.1| 16019 16960 2 + 942 Universal stress protein family - none -
fig|6666666.67468.peg.2112 CDS gi|344045397|gb|AFYA01000006.1| 16992 17489 3 + 498 hypothetical membrane protein - none -
fig|6666666.67468.peg.2113 CDS gi|344045397|gb|AFYA01000006.1| 17880 17557 -3 - 324 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.67468.peg.2114 CDS gi|344045397|gb|AFYA01000006.1| 18839 17901 -2 - 939 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67468.peg.2115 CDS gi|344045397|gb|AFYA01000006.1| 20152 18887 -1 - 1266 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.2116 CDS gi|344045397|gb|AFYA01000006.1| 20841 20149 -3 - 693 ABC-type transporter, ATPase component - none -
fig|6666666.67468.peg.2117 CDS gi|344045397|gb|AFYA01000006.1| 22683 20845 -3 - 1839 FIG00545017: hypothetical protein - none -
fig|6666666.67468.peg.2118 CDS gi|344045397|gb|AFYA01000006.1| 22906 23034 1 + 129 hypothetical protein - none -
fig|6666666.67468.peg.2119 CDS gi|344045397|gb|AFYA01000006.1| 23050 24141 1 + 1092 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67468.peg.2120 CDS gi|344045397|gb|AFYA01000006.1| 24750 24205 -3 - 546 hypothetical protein - none -
fig|6666666.67468.peg.2121 CDS gi|344045397|gb|AFYA01000006.1| 26312 24825 -2 - 1488 ATP-dependent Zn protease - none -
fig|6666666.67468.peg.2122 CDS gi|344045397|gb|AFYA01000006.1| 27380 26883 -2 - 498 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.67468.peg.2123 CDS gi|344045397|gb|AFYA01000006.1| 27532 28341 1 + 810 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67468.peg.2124 CDS gi|344045397|gb|AFYA01000006.1| 28566 29717 3 + 1152 Protein RtcB - none -
fig|6666666.67468.peg.2125 CDS gi|344045397|gb|AFYA01000006.1| 30200 29724 -2 - 477 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67468.peg.2126 CDS gi|344045397|gb|AFYA01000006.1| 31216 30215 -1 - 1002 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase - none -
fig|6666666.67468.peg.2127 CDS gi|344045397|gb|AFYA01000006.1| 31407 32309 3 + 903 ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component - none -
fig|6666666.67468.peg.2128 CDS gi|344045397|gb|AFYA01000006.1| 32612 33790 2 + 1179 FIG00543893: hypothetical protein - none -
fig|6666666.67468.peg.2129 CDS gi|344045397|gb|AFYA01000006.1| 34054 35232 1 + 1179 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.2130 CDS gi|344045397|gb|AFYA01000006.1| 36961 35477 -1 - 1485 sugar kinase - none -
fig|6666666.67468.peg.2131 CDS gi|344045397|gb|AFYA01000006.1| 37590 37018 -3 - 573 Conserved integral membrane protein - none -
fig|6666666.67468.peg.2132 CDS gi|344045397|gb|AFYA01000006.1| 38287 37676 -1 - 612 FIG00546992: hypothetical protein - none -
fig|6666666.67468.peg.2133 CDS gi|344045397|gb|AFYA01000006.1| 38387 39685 2 + 1299 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.67468.peg.2134 CDS gi|344045397|gb|AFYA01000006.1| 40914 39682 -3 - 1233 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.67468.peg.2135 CDS gi|344045397|gb|AFYA01000006.1| 42081 41005 -3 - 1077 hypothetical protein - none -
fig|6666666.67468.peg.2136 CDS gi|344045397|gb|AFYA01000006.1| 42807 42115 -3 - 693 hypothetical protein - none -
fig|6666666.67468.peg.2137 CDS gi|344045397|gb|AFYA01000006.1| 43319 43969 2 + 651 FIG00546334: hypothetical protein - none -
fig|6666666.67468.peg.2138 CDS gi|344045397|gb|AFYA01000006.1| 44142 45077 3 + 936 FIG00546921: hypothetical protein - none -
fig|6666666.67468.peg.2139 CDS gi|344045397|gb|AFYA01000006.1| 48006 45148 -3 - 2859 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67468.peg.2140 CDS gi|344045397|gb|AFYA01000006.1| 48824 48459 -2 - 366 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.67468.peg.2141 CDS gi|344045397|gb|AFYA01000006.1| 50084 49359 -2 - 726 Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4) Glutathione analogs: mycothiol
fig|6666666.67468.peg.2142 CDS gi|344045397|gb|AFYA01000006.1| 50924 50085 -2 - 840 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - none -
fig|6666666.67468.peg.2143 CDS gi|344045397|gb|AFYA01000006.1| 52057 50930 -1 - 1128 Gentisate 1,2-dioxygenase (EC 1.13.11.4) Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67468.peg.2144 CDS gi|344045397|gb|AFYA01000006.1| 53114 52338 -2 - 777 Transcriptional regulator, IclR family - none -
fig|6666666.67468.peg.2145 CDS gi|344045397|gb|AFYA01000006.1| 53227 54525 1 + 1299 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.67468.peg.2146 CDS gi|344045397|gb|AFYA01000006.1| 54563 55858 2 + 1296 Putative n-hydroxybenzoate hydroxylase Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67468.peg.2147 CDS gi|344045397|gb|AFYA01000006.1| 57775 56522 -1 - 1254 putative transmembrane symporter - none -
fig|6666666.67468.peg.2148 CDS gi|344045397|gb|AFYA01000006.1| 58067 58579 2 + 513 Putative integral membrane protein - none -
fig|6666666.67468.peg.2149 CDS gi|344045397|gb|AFYA01000006.1| 58874 60430 2 + 1557 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67468.peg.2150 CDS gi|344045397|gb|AFYA01000006.1| 60427 61053 1 + 627 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67468.peg.2151 CDS gi|344045397|gb|AFYA01000006.1| 61074 62120 3 + 1047 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67468.peg.2152 CDS gi|344045397|gb|AFYA01000006.1| 62113 63537 1 + 1425 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67468.peg.2153 CDS gi|344045397|gb|AFYA01000006.1| 63554 64807 2 + 1254 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67468.peg.2154 CDS gi|344045397|gb|AFYA01000006.1| 64804 65646 1 + 843 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67468.peg.2155 CDS gi|344045397|gb|AFYA01000006.1| 67324 65783 -1 - 1542 Putative integral membrane protein - none -
fig|6666666.67468.peg.2156 CDS gi|344045397|gb|AFYA01000006.1| 68149 67349 -1 - 801 Putative phosphotransferase system protein - none -
fig|6666666.67468.peg.2157 CDS gi|344045397|gb|AFYA01000006.1| 68315 69223 2 + 909 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.2158 CDS gi|344045397|gb|AFYA01000006.1| 69220 70806 1 + 1587 FIG00547304: hypothetical protein - none -
fig|6666666.67468.peg.2159 CDS gi|344045397|gb|AFYA01000006.1| 70880 71230 2 + 351 Putative iron-sulphur protein - none -
fig|6666666.67468.peg.2160 CDS gi|344045397|gb|AFYA01000006.1| 72392 71280 -2 - 1113 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.67468.peg.2161 CDS gi|344045397|gb|AFYA01000006.1| 72295 72435 1 + 141 hypothetical protein - none -
fig|6666666.67468.peg.2162 CDS gi|344045397|gb|AFYA01000006.1| 72694 73668 1 + 975 FIG00545071: hypothetical protein - none -
fig|6666666.67468.peg.2163 CDS gi|344045397|gb|AFYA01000006.1| 73852 74628 1 + 777 FIG00549751: hypothetical protein - none -
fig|6666666.67468.peg.2164 CDS gi|344045397|gb|AFYA01000006.1| 74982 74644 -3 - 339 Transcriptional regulator, ArsR family - none -
fig|6666666.67468.peg.2165 CDS gi|344045397|gb|AFYA01000006.1| 75111 76205 3 + 1095 FIG00548175: hypothetical protein - none -
fig|6666666.67468.peg.2166 CDS gi|344045397|gb|AFYA01000006.1| 76218 76868 3 + 651 oxidoreductase ylbE - none -
fig|6666666.67468.peg.2167 CDS gi|344045397|gb|AFYA01000006.1| 77078 76923 -2 - 156 hypothetical protein - none -
fig|6666666.67468.peg.2168 CDS gi|344045397|gb|AFYA01000006.1| 77358 77200 -3 - 159 hypothetical protein - none -
fig|6666666.67468.peg.2169 CDS gi|344045397|gb|AFYA01000006.1| 77760 77590 -3 - 171 FIG00544159: hypothetical protein - none -
fig|6666666.67468.peg.2170 CDS gi|344045397|gb|AFYA01000006.1| 78188 78943 2 + 756 short chain dehydrogenase - none -
fig|6666666.67468.peg.2171 CDS gi|344045397|gb|AFYA01000006.1| 79020 79202 3 + 183 Sec-independent protein secretion pathway component - none -
fig|6666666.67468.peg.2172 CDS gi|344045397|gb|AFYA01000006.1| 80807 79281 -2 - 1527 Di/tripeptide permease DtpT Proton-dependent Peptide Transporters
fig|6666666.67468.peg.2173 CDS gi|344045397|gb|AFYA01000006.1| 81116 80985 -2 - 132 hypothetical protein - none -
fig|6666666.67468.peg.2174 CDS gi|344045397|gb|AFYA01000006.1| 81758 81201 -2 - 558 putative transcription regulator - none -
fig|6666666.67468.peg.2175 CDS gi|344045397|gb|AFYA01000006.1| 82833 81928 -3 - 906 Catechol 1,2-dioxygenase 1 (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.67468.peg.2176 CDS gi|344045397|gb|AFYA01000006.1| 83951 82860 -2 - 1092 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.2177 CDS gi|344045397|gb|AFYA01000006.1| 85544 84018 -2 - 1527 Major myo-inositol transporter IolT Inositol catabolism
fig|6666666.67468.peg.2178 CDS gi|344045397|gb|AFYA01000006.1| 85967 87451 2 + 1485 Transcriptional regulator, IclR family - none -
fig|6666666.67468.peg.2179 CDS gi|344045397|gb|AFYA01000006.1| 87604 88683 1 + 1080 FIG00546718: hypothetical protein - none -
fig|6666666.67468.peg.2180 CDS gi|344045397|gb|AFYA01000006.1| 88696 89577 1 + 882 FIG00544859: hypothetical protein - none -
fig|6666666.67468.peg.2181 CDS gi|344045397|gb|AFYA01000006.1| 89600 90607 2 + 1008 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Inositol catabolism
fig|6666666.67468.peg.2182 CDS gi|344045397|gb|AFYA01000006.1| 90642 91727 3 + 1086 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Inositol catabolism
fig|6666666.67468.peg.2183 CDS gi|344045397|gb|AFYA01000006.1| 92403 96785 3 + 4383 FIG00545603: hypothetical protein - none -
fig|6666666.67468.peg.2184 CDS gi|344045397|gb|AFYA01000006.1| 96964 98058 1 + 1095 FIG00548631: hypothetical protein - none -
fig|6666666.67468.peg.2185 CDS gi|344045397|gb|AFYA01000006.1| 98939 98178 -2 - 762 short chain dehydrogenase - none -
fig|6666666.67468.peg.2186 CDS gi|344045397|gb|AFYA01000006.1| 100973 98946 -2 - 2028 Acetoacetyl-CoA synthetase (EC 6.2.1.16) Polyhydroxybutyrate metabolism
fig|6666666.67468.peg.2187 CDS gi|344045397|gb|AFYA01000006.1| 102369 101008 -3 - 1362 vannilate transporter VanK - none -
fig|6666666.67468.peg.2188 CDS gi|344045397|gb|AFYA01000006.1| 103389 102622 -3 - 768 Transcriptional regulator, IclR family - none -
fig|6666666.67468.peg.2189 CDS gi|344045397|gb|AFYA01000006.1| 104276 103392 -2 - 885 PROBABLE ANTIBIOTIC-RESISTANCE PROTEIN - none -
fig|6666666.67468.peg.2190 CDS gi|344045397|gb|AFYA01000006.1| 105954 104440 -3 - 1515 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67468.peg.2191 CDS gi|344045397|gb|AFYA01000006.1| 106814 106365 -2 - 450 hypothetical protein - none -
fig|6666666.67468.peg.2192 CDS gi|344045397|gb|AFYA01000006.1| 107800 106955 -1 - 846 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.2193 CDS gi|344045397|gb|AFYA01000006.1| 107833 108576 1 + 744 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.2194 CDS gi|344045397|gb|AFYA01000006.1| 108560 110305 2 + 1746 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67468.peg.2195 CDS gi|344045397|gb|AFYA01000006.1| 110359 111204 1 + 846 hypothetical protein - none -
fig|6666666.67468.peg.2196 CDS gi|344045397|gb|AFYA01000006.1| 111204 111698 3 + 495 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.67468.peg.2197 CDS gi|344045397|gb|AFYA01000006.1| 111703 112932 1 + 1230 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Biotin synthesis cluster;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67468.peg.2198 CDS gi|344045397|gb|AFYA01000006.1| 113027 114361 2 + 1335 FIG01001418: hypothetical protein - none -
fig|6666666.67468.peg.2199 CDS gi|344045397|gb|AFYA01000006.1| 115093 116124 1 + 1032 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67468.peg.2200 CDS gi|344045397|gb|AFYA01000006.1| 116969 116238 -2 - 732 Putative stomatin/prohibitin-family membrane protease subunit PA4582 - none -
fig|6666666.67468.peg.2201 CDS gi|344045397|gb|AFYA01000006.1| 117382 117702 1 + 321 hypothetical protein - none -
fig|6666666.67468.peg.2202 CDS gi|344045397|gb|AFYA01000006.1| 117689 119434 2 + 1746 putative ATP/GTP-binding protein - none -
fig|6666666.67468.peg.2203 CDS gi|344045397|gb|AFYA01000006.1| 120792 119764 -3 - 1029 hypothetical protein - none -
fig|6666666.67468.peg.2204 CDS gi|344045397|gb|AFYA01000006.1| 120970 121947 1 + 978 Putative oxidoreductase SMc00968 Quinone oxidoreductase family
fig|6666666.67468.peg.2205 CDS gi|344045397|gb|AFYA01000006.1| 121992 122378 3 + 387 FIG00549338: hypothetical protein - none -
fig|6666666.67468.peg.2206 CDS gi|344045397|gb|AFYA01000006.1| 122654 122448 -2 - 207 Hypothetical protein - none -
fig|6666666.67468.peg.2207 CDS gi|344045397|gb|AFYA01000006.1| 123550 122750 -1 - 801 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.67468.peg.2208 CDS gi|344045397|gb|AFYA01000006.1| 123625 123972 1 + 348 FIG00548982: hypothetical protein - none -
fig|6666666.67468.peg.2209 CDS gi|344045397|gb|AFYA01000006.1| 124045 124248 1 + 204 Copper chaperone Copper homeostasis
fig|6666666.67468.peg.2210 CDS gi|344045397|gb|AFYA01000006.1| 124675 124328 -1 - 348 hypothetical membrane protein - none -
fig|6666666.67468.peg.2211 CDS gi|344045397|gb|AFYA01000006.1| 125381 124668 -2 - 714 Branched-chain amino acid transport protein azlC - none -
fig|6666666.67468.peg.2212 CDS gi|344045397|gb|AFYA01000006.1| 125987 125382 -2 - 606 Putative transcriptional regulator - none -
fig|6666666.67468.peg.2213 CDS gi|344045397|gb|AFYA01000006.1| 127464 125980 -3 - 1485 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67468.peg.2214 CDS gi|344045397|gb|AFYA01000006.1| 128254 127967 -1 - 288 hypothetical protein - none -
fig|6666666.67468.peg.2215 CDS gi|344045397|gb|AFYA01000006.1| 128348 128878 2 + 531 MutT/nudix family protein - none -
fig|6666666.67468.peg.2216 CDS gi|344045397|gb|AFYA01000006.1| 128875 131388 1 + 2514 probable secreted protein. - none -
fig|6666666.67468.peg.2217 CDS gi|344045397|gb|AFYA01000006.1| 131441 134785 2 + 3345 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67468.peg.2218 CDS gi|344045397|gb|AFYA01000006.1| 135039 135644 3 + 606 putative RNA polymerase sigma factor - none -
fig|6666666.67468.peg.2219 CDS gi|344045397|gb|AFYA01000006.1| 135749 136702 2 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.67468.peg.2220 CDS gi|344045397|gb|AFYA01000006.1| 136788 137111 3 + 324 Thioredoxin - none -
fig|6666666.67468.peg.2221 CDS gi|344045397|gb|AFYA01000006.1| 137188 138378 1 + 1191 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.67468.peg.2222 CDS gi|344045397|gb|AFYA01000006.1| 138995 138375 -2 - 621 FIG007808: hypothetical protein - none -
fig|6666666.67468.peg.2223 CDS gi|344045397|gb|AFYA01000006.1| 140151 139012 -3 - 1140 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67468.peg.2224 CDS gi|344045397|gb|AFYA01000006.1| 141134 140211 -2 - 924 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67468.peg.2225 CDS gi|344045397|gb|AFYA01000006.1| 141869 141240 -2 - 630 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67468.peg.2226 CDS gi|344045397|gb|AFYA01000006.1| 143011 142058 -1 - 954 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster
fig|6666666.67468.peg.2227 CDS gi|344045397|gb|AFYA01000006.1| 143748 143347 -3 - 402 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.67468.peg.2228 CDS gi|344045397|gb|AFYA01000006.1| 143931 143788 -3 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67468.peg.2229 CDS gi|344045397|gb|AFYA01000006.1| 144419 144198 -2 - 222 FIG00547980: hypothetical protein - none -
fig|6666666.67468.peg.2230 CDS gi|344045397|gb|AFYA01000006.1| 144761 144615 -2 - 147 hypothetical protein - none -
fig|6666666.67468.peg.2231 CDS gi|344045397|gb|AFYA01000006.1| 144780 146354 3 + 1575 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67468.peg.2232 CDS gi|344045397|gb|AFYA01000006.1| 147071 148255 2 + 1185 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67468.peg.2233 CDS gi|344045397|gb|AFYA01000006.1| 148364 149548 2 + 1185 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67468.peg.2234 CDS gi|344045397|gb|AFYA01000006.1| 149545 150081 1 + 537 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67468.peg.2235 CDS gi|344045397|gb|AFYA01000006.1| 150214 152268 1 + 2055 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67468.peg.2236 CDS gi|344045397|gb|AFYA01000006.1| 152702 153577 2 + 876 FIG00544157: hypothetical protein - none -
fig|6666666.67468.peg.2237 CDS gi|344045397|gb|AFYA01000006.1| 154155 153574 -3 - 582 FIG00544786: hypothetical protein - none -
fig|6666666.67468.peg.2238 CDS gi|344045397|gb|AFYA01000006.1| 154693 154250 -1 - 444 FIG00544172: hypothetical protein - none -
fig|6666666.67468.peg.2239 CDS gi|344045397|gb|AFYA01000006.1| 155951 154884 -2 - 1068 hypothetical transcriptional regulator - none -
fig|6666666.67468.peg.2240 CDS gi|344045397|gb|AFYA01000006.1| 156303 156040 -3 - 264 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67468.peg.2241 CDS gi|344045397|gb|AFYA01000006.1| 156548 156300 -2 - 249 Prevent host death protein, Phd antitoxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.67468.peg.2242 CDS gi|344045397|gb|AFYA01000006.1| 156611 159181 2 + 2571 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67468.peg.2243 CDS gi|344045397|gb|AFYA01000006.1| 159185 159529 2 + 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67468.peg.2244 CDS gi|344045397|gb|AFYA01000006.1| 159756 161219 3 + 1464 amino acid permease-associated region - none -
fig|6666666.67468.peg.2245 CDS gi|344045397|gb|AFYA01000006.1| 161246 162559 2 + 1314 amine oxidase - none -
fig|6666666.67468.peg.2246 CDS gi|344045397|gb|AFYA01000006.1| 163491 162565 -3 - 927 Transcriptional regulator, AraC family - none -
fig|6666666.67468.peg.2247 CDS gi|344045397|gb|AFYA01000006.1| 163686 165086 3 + 1401 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.2248 CDS gi|344045397|gb|AFYA01000006.1| 166518 165592 -3 - 927 Putative membrane protein YeiH - none -
fig|6666666.67468.peg.2249 CDS gi|344045397|gb|AFYA01000006.1| 166700 167596 2 + 897 LysR family transcriptional regulator YeiE LysR-family proteins in Escherichia coli
fig|6666666.67468.peg.2250 CDS gi|344045397|gb|AFYA01000006.1| 167646 168059 3 + 414 FIG00547065: hypothetical protein - none -
fig|6666666.67468.peg.2251 CDS gi|344045397|gb|AFYA01000006.1| 169114 168242 -1 - 873 putative cytochrome c biogenesis protein - none -
fig|6666666.67468.peg.2252 CDS gi|344045397|gb|AFYA01000006.1| 169864 169118 -1 - 747 FIG00546897: hypothetical protein - none -
fig|6666666.67468.peg.2253 CDS gi|344045397|gb|AFYA01000006.1| 170090 170461 2 + 372 Transcriptional regulator, MecI family - none -
fig|6666666.67468.peg.2254 CDS gi|344045397|gb|AFYA01000006.1| 170458 171456 1 + 999 Peptidase M48, Ste24p precursor - none -
fig|6666666.67468.peg.2255 CDS gi|344045397|gb|AFYA01000006.1| 171783 173738 3 + 1956 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67468.peg.2256 CDS gi|344045397|gb|AFYA01000006.1| 174405 175655 3 + 1251 hypothetical protein - none -
fig|6666666.67468.peg.2257 CDS gi|344045397|gb|AFYA01000006.1| 175856 178084 2 + 2229 hypothetical protein - none -
fig|6666666.67468.peg.2258 CDS gi|344045397|gb|AFYA01000006.1| 178138 179568 1 + 1431 hypothetical protein - none -
fig|6666666.67468.peg.2259 CDS gi|344045397|gb|AFYA01000006.1| 179558 180310 2 + 753 Polysaccharide deacetylase - none -
fig|6666666.67468.peg.2260 CDS gi|344045397|gb|AFYA01000006.1| 180307 181647 1 + 1341 hypothetical protein - none -
fig|6666666.67468.peg.2261 CDS gi|344045397|gb|AFYA01000006.1| 181637 182785 2 + 1149 hypothetical protein - none -
fig|6666666.67468.peg.2262 CDS gi|344045397|gb|AFYA01000006.1| 182760 183878 3 + 1119 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.67468.peg.2263 CDS gi|344045397|gb|AFYA01000006.1| 184906 183875 -1 - 1032 hypothetical protein - none -
fig|6666666.67468.peg.2264 CDS gi|344045397|gb|AFYA01000006.1| 186333 184903 -3 - 1431 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) CBSS-258594.1.peg.3339
fig|6666666.67468.peg.2265 CDS gi|344045397|gb|AFYA01000006.1| 186582 187781 3 + 1200 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67468.peg.2266 CDS gi|344045397|gb|AFYA01000006.1| 187781 188890 2 + 1110 hypothetical protein - none -
fig|6666666.67468.peg.2267 CDS gi|344045397|gb|AFYA01000006.1| 189393 189268 -3 - 126 hypothetical protein - none -
fig|6666666.67468.peg.2268 CDS gi|344045397|gb|AFYA01000006.1| 189462 189899 3 + 438 Organic hydroperoxide resistance protein CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.67468.peg.2269 CDS gi|344045397|gb|AFYA01000006.1| 191431 190049 -1 - 1383 FIG00549010: hypothetical protein - none -
fig|6666666.67468.peg.2270 CDS gi|344045397|gb|AFYA01000006.1| 191505 192428 3 + 924 Myosin heavy chain - none -
fig|6666666.67468.peg.2271 CDS gi|344045397|gb|AFYA01000006.1| 193769 192489 -2 - 1281 putative secreted protein - none -
fig|6666666.67468.peg.2272 CDS gi|344045397|gb|AFYA01000006.1| 194807 193851 -2 - 957 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67468.peg.2273 CDS gi|344045397|gb|AFYA01000006.1| 195655 194804 -1 - 852 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67468.peg.2274 CDS gi|344045397|gb|AFYA01000006.1| 195685 196344 1 + 660 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67468.peg.2275 CDS gi|344045397|gb|AFYA01000006.1| 196387 197370 1 + 984 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.67468.peg.2276 CDS gi|344045397|gb|AFYA01000006.1| 197367 198392 3 + 1026 Probable ABC transport protein, membrane component - none -
fig|6666666.67468.peg.2277 CDS gi|344045397|gb|AFYA01000006.1| 198389 199150 2 + 762 putative sugar ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.2278 CDS gi|344045397|gb|AFYA01000006.1| 199988 199152 -2 - 837 FIG00547773: hypothetical protein - none -
fig|6666666.67468.peg.2279 CDS gi|344045397|gb|AFYA01000006.1| 200043 200615 3 + 573 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.2280 CDS gi|344045397|gb|AFYA01000006.1| 200707 201384 1 + 678 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.67468.peg.2281 CDS gi|344045397|gb|AFYA01000006.1| 202532 201957 -2 - 576 AraC-type DNA-binding domain-containing protein - none -
fig|6666666.67468.peg.2282 CDS gi|344045397|gb|AFYA01000006.1| 202998 202684 -3 - 315 AraC-type DNA-binding domain-containing protein - none -
fig|6666666.67468.peg.2283 CDS gi|344045397|gb|AFYA01000006.1| 203312 202995 -2 - 318 hypothetical protein - none -
fig|6666666.67468.peg.2284 CDS gi|344045397|gb|AFYA01000006.1| 203445 203558 3 + 114 hypothetical protein - none -
fig|6666666.67468.peg.2285 CDS gi|344045397|gb|AFYA01000006.1| 203652 203876 3 + 225 Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) Siderophore Enterobactin
fig|6666666.67468.peg.2286 CDS gi|344045397|gb|AFYA01000006.1| 204543 204403 -3 - 141 hypothetical protein - none -
fig|6666666.67468.peg.2287 CDS gi|344045397|gb|AFYA01000006.1| 205135 204863 -1 - 273 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67468.peg.2288 CDS gi|344045397|gb|AFYA01000006.1| 207179 205236 -2 - 1944 Serine/threonine-protein kinase PknB (EC 2.7.11.1) - none -
fig|6666666.67468.peg.2289 CDS gi|344045397|gb|AFYA01000006.1| 208585 207176 -1 - 1410 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67468.peg.2290 CDS gi|344045397|gb|AFYA01000006.1| 210013 208589 -1 - 1425 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.2291 CDS gi|344045397|gb|AFYA01000006.1| 211335 210010 -3 - 1326 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67468.peg.2292 CDS gi|344045397|gb|AFYA01000006.1| 212687 211332 -2 - 1356 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67468.peg.2293 CDS gi|344045397|gb|AFYA01000006.1| 213151 212687 -1 - 465 FIG00818182: hypothetical protein - none -
fig|6666666.67468.peg.2294 CDS gi|344045397|gb|AFYA01000006.1| 214034 213168 -2 - 867 FIG00543872: hypothetical protein - none -
fig|6666666.67468.peg.2295 CDS gi|344045397|gb|AFYA01000006.1| 214781 214560 -2 - 222 hypothetical protein - none -
fig|6666666.67468.peg.2296 CDS gi|344045397|gb|AFYA01000006.1| 216102 215629 -3 - 474 hypothetical protein - none -
fig|6666666.67468.peg.2297 CDS gi|344045397|gb|AFYA01000006.1| 216151 216276 1 + 126 hypothetical protein - none -
fig|6666666.67468.peg.2298 CDS gi|344045397|gb|AFYA01000006.1| 217760 216288 -2 - 1473 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67468.peg.2299 CDS gi|344045397|gb|AFYA01000006.1| 217968 218159 3 + 192 FIG00548267: hypothetical protein - none -
fig|6666666.67468.peg.2300 CDS gi|344045397|gb|AFYA01000006.1| 218293 218634 1 + 342 FIG00548267: hypothetical protein - none -
fig|6666666.67468.peg.2301 CDS gi|344045397|gb|AFYA01000006.1| 218803 220173 1 + 1371 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67468.peg.2302 CDS gi|344045397|gb|AFYA01000006.1| 220996 220250 -1 - 747 FIG00829050: hypothetical protein - none -
fig|6666666.67468.peg.2303 CDS gi|344045397|gb|AFYA01000006.1| 221299 221006 -1 - 294 rhodanese-related sulfurtransferase - none -
fig|6666666.67468.peg.2304 CDS gi|344045397|gb|AFYA01000006.1| 221893 221300 -1 - 594 FIG00546770: hypothetical protein - none -
fig|6666666.67468.peg.2305 CDS gi|344045397|gb|AFYA01000006.1| 222019 222276 1 + 258 FIG00545173: hypothetical protein - none -
fig|6666666.67468.peg.2306 CDS gi|344045397|gb|AFYA01000006.1| 222737 223594 2 + 858 FIG00547320: hypothetical protein - none -
fig|6666666.67468.peg.2307 CDS gi|344045397|gb|AFYA01000006.1| 223741 224583 1 + 843 FIG00546380: hypothetical protein - none -
fig|6666666.67468.peg.2308 CDS gi|344045397|gb|AFYA01000006.1| 224602 225315 1 + 714 hypothetical protein - none -
fig|6666666.67468.peg.2309 CDS gi|344045397|gb|AFYA01000006.1| 225319 226995 1 + 1677 FIG00544908: hypothetical protein - none -
fig|6666666.67468.peg.2310 CDS gi|344045397|gb|AFYA01000006.1| 228180 227059 -3 - 1122 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.67468.peg.2311 CDS gi|344045397|gb|AFYA01000006.1| 228712 228263 -1 - 450 cis-3-chloroacrylic acid dehalogenase - none -
fig|6666666.67468.peg.2312 CDS gi|344045397|gb|AFYA01000006.1| 228844 230133 1 + 1290 chloride channel EriC-like protein - none -
fig|6666666.67468.peg.2313 CDS gi|344045397|gb|AFYA01000006.1| 230869 230177 -1 - 693 Riboflavin transporter PnuX Riboflavin, FMN and FAD metabolism
fig|6666666.67468.peg.2314 CDS gi|344045397|gb|AFYA01000006.1| 231282 232658 3 + 1377 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.67468.peg.2315 CDS gi|344045397|gb|AFYA01000006.1| 232841 232975 2 + 135 hypothetical protein - none -
fig|6666666.67468.peg.2316 CDS gi|344045397|gb|AFYA01000006.1| 234968 233388 -2 - 1581 CitH citrate transporter Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67468.peg.2317 CDS gi|344045397|gb|AFYA01000006.1| 235197 236831 3 + 1635 Signal transduction histidine kinase CitA regulating citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67468.peg.2318 CDS gi|344045397|gb|AFYA01000006.1| 236831 237487 2 + 657 Response regulator CitB of citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67468.peg.2319 CDS gi|344045397|gb|AFYA01000006.1| 238398 237484 -3 - 915 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67468.peg.2320 CDS gi|344045397|gb|AFYA01000006.1| 238514 238945 2 + 432 FIG00545336: hypothetical protein - none -
fig|6666666.67468.peg.2321 CDS gi|344045397|gb|AFYA01000006.1| 239160 240164 3 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67468.peg.2322 CDS gi|344045397|gb|AFYA01000006.1| 240651 240397 -3 - 255 hypothetical protein - none -
fig|6666666.67468.peg.2323 CDS gi|344045623|gb|AFYA01000005.1| 1339 290 -1 - 1050 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67468.peg.2324 CDS gi|344045623|gb|AFYA01000005.1| 2106 1414 -3 - 693 putative secreted protein - none -
fig|6666666.67468.peg.2325 CDS gi|344045623|gb|AFYA01000005.1| 2325 3404 3 + 1080 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67468.peg.2326 CDS gi|344045623|gb|AFYA01000005.1| 4277 3405 -2 - 873 lysine export regulator protein - none -
fig|6666666.67468.peg.2327 CDS gi|344045623|gb|AFYA01000005.1| 4339 5049 1 + 711 lysine exporter protein - none -
fig|6666666.67468.peg.2328 CDS gi|344045623|gb|AFYA01000005.1| 6269 5046 -2 - 1224 Putative aldo/keto-reductase family protein - none -
fig|6666666.67468.peg.2329 CDS gi|344045623|gb|AFYA01000005.1| 6919 6239 -1 - 681 NADP oxidoreductase, coenzyme F420-dependent - none -
fig|6666666.67468.peg.2330 CDS gi|344045623|gb|AFYA01000005.1| 8538 7033 -3 - 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67468.peg.2331 CDS gi|344045623|gb|AFYA01000005.1| 9759 8752 -3 - 1008 Sodium-dependent transporter - none -
fig|6666666.67468.peg.2332 CDS gi|344045623|gb|AFYA01000005.1| 10899 9883 -3 - 1017 ABC-type transport system, periplasmic component - none -
fig|6666666.67468.peg.2333 CDS gi|344045623|gb|AFYA01000005.1| 11777 11178 -2 - 600 N-acetylglutamate synthase related protein Arginine Biosynthesis -- gjo
fig|6666666.67468.peg.2334 CDS gi|344045623|gb|AFYA01000005.1| 12340 11969 -1 - 372 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.67468.peg.2335 CDS gi|344045623|gb|AFYA01000005.1| 13291 12347 -1 - 945 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.67468.peg.2336 CDS gi|344045623|gb|AFYA01000005.1| 14227 13313 -1 - 915 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.67468.peg.2337 CDS gi|344045623|gb|AFYA01000005.1| 15855 14284 -3 - 1572 ABC-type sugar transport system, ATP-binding protein (EC 3.6.3.17) - none -
fig|6666666.67468.peg.2338 CDS gi|344045623|gb|AFYA01000005.1| 16954 15845 -1 - 1110 transcriptional regulator - none -
fig|6666666.67468.peg.2339 CDS gi|344045623|gb|AFYA01000005.1| 18246 17206 -3 - 1041 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.2340 CDS gi|344045623|gb|AFYA01000005.1| 18504 18824 3 + 321 Conserved putative integral membrane protein - none -
fig|6666666.67468.peg.2341 CDS gi|344045623|gb|AFYA01000005.1| 20017 19166 -1 - 852 siderophore-interacting protein - none -
fig|6666666.67468.peg.2342 CDS gi|344045623|gb|AFYA01000005.1| 21662 20169 -2 - 1494 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67468.peg.2343 CDS gi|344045623|gb|AFYA01000005.1| 21967 21668 -1 - 300 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67468.peg.2344 CDS gi|344045623|gb|AFYA01000005.1| 22190 22855 2 + 666 FIG00544014: hypothetical protein - none -
fig|6666666.67468.peg.2345 CDS gi|344045623|gb|AFYA01000005.1| 24957 22915 -3 - 2043 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67468.peg.2346 CDS gi|344045623|gb|AFYA01000005.1| 25091 25828 2 + 738 FIG00544413: hypothetical protein - none -
fig|6666666.67468.peg.2347 CDS gi|344045623|gb|AFYA01000005.1| 25903 27366 1 + 1464 permease of the major facilitator superfamily - none -
fig|6666666.67468.peg.2348 CDS gi|344045623|gb|AFYA01000005.1| 28355 27363 -2 - 993 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67468.peg.2349 CDS gi|344045623|gb|AFYA01000005.1| 29458 28361 -1 - 1098 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67468.peg.2350 CDS gi|344045623|gb|AFYA01000005.1| 29988 29590 -3 - 399 hypothetical protein - none -
fig|6666666.67468.peg.2351 CDS gi|344045623|gb|AFYA01000005.1| 30173 31315 2 + 1143 FIG00544505: hypothetical protein - none -
fig|6666666.67468.peg.2352 CDS gi|344045623|gb|AFYA01000005.1| 31358 32302 2 + 945 Spermidine synthase-like protein - none -
fig|6666666.67468.peg.2353 CDS gi|344045623|gb|AFYA01000005.1| 32918 33145 2 + 228 predicted transcriptional regulator - none -
fig|6666666.67468.peg.2354 CDS gi|344045623|gb|AFYA01000005.1| 33142 34290 1 + 1149 FIG00546229: hypothetical protein - none -
fig|6666666.67468.peg.2355 CDS gi|344045623|gb|AFYA01000005.1| 34634 34948 2 + 315 hypothetical membrane protein - none -
fig|6666666.67468.peg.2356 CDS gi|344045623|gb|AFYA01000005.1| 36075 34945 -3 - 1131 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67468.peg.2357 CDS gi|344045623|gb|AFYA01000005.1| 37034 36081 -2 - 954 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67468.peg.2358 CDS gi|344045623|gb|AFYA01000005.1| 37852 37064 -1 - 789 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67468.peg.2359 CDS gi|344045623|gb|AFYA01000005.1| 39241 38078 -1 - 1164 SAM-dependent methyltransferase - none -
fig|6666666.67468.peg.2360 CDS gi|344045623|gb|AFYA01000005.1| 40065 39259 -3 - 807 FIG00996530: hypothetical protein - none -
fig|6666666.67468.peg.2361 CDS gi|344045623|gb|AFYA01000005.1| 41614 40721 -1 - 894 ABC transporter, ATP-binding component - none -
fig|6666666.67468.peg.2362 CDS gi|344045623|gb|AFYA01000005.1| 41775 43802 3 + 2028 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.67468.peg.2363 CDS gi|344045623|gb|AFYA01000005.1| 43840 46035 1 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67468.peg.2364 CDS gi|344045623|gb|AFYA01000005.1| 47280 46321 -3 - 960 Alkanesulfonates-binding protein Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67468.peg.2365 CDS gi|344045623|gb|AFYA01000005.1| 48021 47290 -3 - 732 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67468.peg.2366 CDS gi|344045623|gb|AFYA01000005.1| 48806 48036 -2 - 771 Alkanesulfonates transport system permease protein Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67468.peg.2367 CDS gi|344045623|gb|AFYA01000005.1| 48760 48894 1 + 135 FIG00546479: hypothetical protein - none -
fig|6666666.67468.peg.2368 CDS gi|344045623|gb|AFYA01000005.1| 49999 48854 -1 - 1146 Alkanesulfonate monooxygenase (EC 1.14.14.5) Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67468.peg.2369 CDS gi|344045623|gb|AFYA01000005.1| 51130 50207 -1 - 924 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67468.peg.2370 CDS gi|344045623|gb|AFYA01000005.1| 51521 51216 -2 - 306 FIG00544011: hypothetical protein - none -
fig|6666666.67468.peg.2371 CDS gi|344045623|gb|AFYA01000005.1| 51610 52065 1 + 456 Methylmalonyl-CoA epimerase (EC 5.1.99.1); Ethylmalonyl-CoA epimerase - none -
fig|6666666.67468.peg.2372 CDS gi|344045623|gb|AFYA01000005.1| 53054 52362 -2 - 693 FIG00996186: hypothetical protein - none -
fig|6666666.67468.peg.2373 CDS gi|344045623|gb|AFYA01000005.1| 53554 53081 -1 - 474 FIG00544079: hypothetical protein - none -
fig|6666666.67468.peg.2374 CDS gi|344045623|gb|AFYA01000005.1| 54173 53799 -2 - 375 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2375 CDS gi|344045623|gb|AFYA01000005.1| 55636 54185 -1 - 1452 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2376 CDS gi|344045623|gb|AFYA01000005.1| 56616 55639 -3 - 978 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2377 CDS gi|344045623|gb|AFYA01000005.1| 58316 56673 -2 - 1644 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2378 CDS gi|344045623|gb|AFYA01000005.1| 59193 58378 -3 - 816 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2379 CDS gi|344045623|gb|AFYA01000005.1| 59765 59199 -2 - 567 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2380 CDS gi|344045623|gb|AFYA01000005.1| 60038 59796 -2 - 243 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2381 CDS gi|344045623|gb|AFYA01000005.1| 60984 60172 -3 - 813 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67468.peg.2382 CDS gi|344045623|gb|AFYA01000005.1| 62072 61623 -2 - 450 ATP synthase protein I - none -
fig|6666666.67468.peg.2383 CDS gi|344045623|gb|AFYA01000005.1| 63277 62129 -1 - 1149 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67468.peg.2384 CDS gi|344045623|gb|AFYA01000005.1| 63928 63278 -1 - 651 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67468.peg.2385 CDS gi|344045623|gb|AFYA01000005.1| 64817 63978 -2 - 840 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67468.peg.2386 CDS gi|344045623|gb|AFYA01000005.1| 65894 64818 -2 - 1077 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67468.peg.2387 CDS gi|344045623|gb|AFYA01000005.1| 68176 65894 -1 - 2283 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67468.peg.2388 CDS gi|344045623|gb|AFYA01000005.1| 68708 70435 2 + 1728 acyl-CoA synthetase - none -
fig|6666666.67468.peg.2389 CDS gi|344045623|gb|AFYA01000005.1| 70500 71633 3 + 1134 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67468.peg.2390 CDS gi|344045623|gb|AFYA01000005.1| 72117 73328 3 + 1212 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67468.peg.2391 CDS gi|344045623|gb|AFYA01000005.1| 73329 73892 3 + 564 FIG00546849: hypothetical protein - none -
fig|6666666.67468.peg.2392 CDS gi|344045623|gb|AFYA01000005.1| 74053 75456 1 + 1404 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.67468.peg.2393 CDS gi|344045623|gb|AFYA01000005.1| 75460 76470 1 + 1011 Uncharacterized protein Rv1841c/MT1889 - none -
fig|6666666.67468.peg.2394 CDS gi|344045623|gb|AFYA01000005.1| 76644 76874 3 + 231 serine protease - none -
fig|6666666.67468.peg.2395 CDS gi|344045623|gb|AFYA01000005.1| 76998 78584 3 + 1587 serine protease - none -
fig|6666666.67468.peg.2396 CDS gi|344045623|gb|AFYA01000005.1| 79169 78681 -2 - 489 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67468.peg.2397 CDS gi|344045623|gb|AFYA01000005.1| 79427 80764 2 + 1338 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67468.peg.2398 CDS gi|344045623|gb|AFYA01000005.1| 80781 84539 3 + 3759 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67468.peg.2399 CDS gi|344045623|gb|AFYA01000005.1| 84539 86134 2 + 1596 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67468.peg.2400 CDS gi|344045623|gb|AFYA01000005.1| 86139 86825 3 + 687 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67468.peg.2401 CDS gi|344045623|gb|AFYA01000005.1| 86834 87613 2 + 780 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67468.peg.2402 CDS gi|344045623|gb|AFYA01000005.1| 87798 88490 3 + 693 FIG00544995: hypothetical protein - none -
fig|6666666.67468.peg.2403 CDS gi|344045623|gb|AFYA01000005.1| 89473 88544 -1 - 930 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67468.peg.2404 CDS gi|344045623|gb|AFYA01000005.1| 90821 89484 -2 - 1338 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67468.peg.2405 CDS gi|344045623|gb|AFYA01000005.1| 91054 91770 1 + 717 FIG00544742: hypothetical protein - none -
fig|6666666.67468.peg.2406 CDS gi|344045623|gb|AFYA01000005.1| 93520 92183 -1 - 1338 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.2407 CDS gi|344045623|gb|AFYA01000005.1| 95175 93523 -3 - 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67468.peg.2408 CDS gi|344045623|gb|AFYA01000005.1| 95399 96907 2 + 1509 FIG00546777: hypothetical protein - none -
fig|6666666.67468.peg.2409 CDS gi|344045623|gb|AFYA01000005.1| 98498 97743 -2 - 756 GTP pyrophosphokinase (EC 2.7.6.5) - none -
fig|6666666.67468.peg.2410 CDS gi|344045623|gb|AFYA01000005.1| 100474 98597 -1 - 1878 Heavy-Metal transporting ATPase - none -
fig|6666666.67468.peg.2411 CDS gi|344045623|gb|AFYA01000005.1| 100878 100642 -3 - 237 Copper chaperone Copper homeostasis
fig|6666666.67468.peg.2412 CDS gi|344045623|gb|AFYA01000005.1| 101660 100989 -2 - 672 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.67468.peg.2413 CDS gi|344045623|gb|AFYA01000005.1| 102140 102562 2 + 423 FIG00544494: hypothetical protein - none -
fig|6666666.67468.peg.2414 CDS gi|344045623|gb|AFYA01000005.1| 102854 102639 -2 - 216 FIG00546860: hypothetical protein - none -
fig|6666666.67468.peg.2415 CDS gi|344045623|gb|AFYA01000005.1| 103478 102990 -2 - 489 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.2416 CDS gi|344045623|gb|AFYA01000005.1| 103763 103644 -2 - 120 hypothetical protein - none -
fig|6666666.67468.peg.2417 CDS gi|344045623|gb|AFYA01000005.1| 103756 104295 1 + 540 FIG00545197: hypothetical protein - none -
fig|6666666.67468.peg.2418 CDS gi|344045623|gb|AFYA01000005.1| 104640 104374 -3 - 267 Short-chain fatty acids transporter - none -
fig|6666666.67468.peg.2419 CDS gi|344045623|gb|AFYA01000005.1| 105696 104833 -3 - 864 esterase/lipase - none -
fig|6666666.67468.peg.2420 CDS gi|344045623|gb|AFYA01000005.1| 108418 105788 -1 - 2631 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67468.peg.2421 CDS gi|344045623|gb|AFYA01000005.1| 109519 108422 -1 - 1098 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67468.peg.2422 CDS gi|344045623|gb|AFYA01000005.1| 110492 109638 -2 - 855 FIG00545674: hypothetical protein - none -
fig|6666666.67468.peg.2423 CDS gi|344045623|gb|AFYA01000005.1| 113505 110485 -3 - 3021 Helicase, SNF2/RAD54 family - none -
fig|6666666.67468.peg.2424 CDS gi|344045623|gb|AFYA01000005.1| 113512 113628 1 + 117 hypothetical protein - none -
fig|6666666.67468.peg.2425 CDS gi|344045623|gb|AFYA01000005.1| 113883 115457 3 + 1575 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67468.peg.2426 CDS gi|344045623|gb|AFYA01000005.1| 115653 116045 3 + 393 FIG00544279: hypothetical protein - none -
fig|6666666.67468.peg.2427 CDS gi|344045623|gb|AFYA01000005.1| 116112 116585 3 + 474 FIG00544250: hypothetical protein - none -
fig|6666666.67468.peg.2428 CDS gi|344045623|gb|AFYA01000005.1| 117534 116647 -3 - 888 Catechol 1,2-dioxygenase 1 (EC 1.13.11.1) Catechol branch of beta-ketoadipate pathway
fig|6666666.67468.peg.2429 CDS gi|344045623|gb|AFYA01000005.1| 118615 117545 -1 - 1071 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.2430 CDS gi|344045623|gb|AFYA01000005.1| 120217 118625 -1 - 1593 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - none -
fig|6666666.67468.peg.2431 CDS gi|344045623|gb|AFYA01000005.1| 120370 121044 1 + 675 FIG00547829: hypothetical protein - none -
fig|6666666.67468.peg.2432 CDS gi|344045623|gb|AFYA01000005.1| 123545 121356 -2 - 2190 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67468.peg.2433 CDS gi|344045623|gb|AFYA01000005.1| 123864 125270 3 + 1407 putative gamma-aminobutyrate permease - none -
fig|6666666.67468.peg.2434 CDS gi|344045623|gb|AFYA01000005.1| 125519 125914 2 + 396 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67468.peg.2435 CDS gi|344045623|gb|AFYA01000005.1| 125914 128829 1 + 2916 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.67468.peg.2436 CDS gi|344045623|gb|AFYA01000005.1| 129110 130651 2 + 1542 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67468.peg.2437 CDS gi|344045623|gb|AFYA01000005.1| 130654 131655 1 + 1002 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67468.peg.2438 CDS gi|344045623|gb|AFYA01000005.1| 131761 133203 1 + 1443 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67468.peg.2439 CDS gi|344045623|gb|AFYA01000005.1| 133200 134756 3 + 1557 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67468.peg.2440 CDS gi|344045623|gb|AFYA01000005.1| 136675 135119 -1 - 1557 non-ribosomal peptide synthetase modules and related proteins - none -
fig|6666666.67468.peg.2441 CDS gi|344045623|gb|AFYA01000005.1| 136826 137620 2 + 795 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.2442 CDS gi|344045623|gb|AFYA01000005.1| 138526 137630 -1 - 897 hypothetical protein - none -
fig|6666666.67468.peg.2443 CDS gi|344045623|gb|AFYA01000005.1| 138853 138548 -1 - 306 hypothetical membrane protein - none -
fig|6666666.67468.peg.2444 CDS gi|344045623|gb|AFYA01000005.1| 140356 138944 -1 - 1413 Flavin-containing monooxygenase - none -
fig|6666666.67468.peg.2445 CDS gi|344045623|gb|AFYA01000005.1| 140497 140625 1 + 129 hypothetical protein - none -
fig|6666666.67468.peg.2446 CDS gi|344045623|gb|AFYA01000005.1| 141728 141270 -2 - 459 hypothetical membrane protein - none -
fig|6666666.67468.peg.2447 CDS gi|344045623|gb|AFYA01000005.1| 142193 144430 2 + 2238 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67468.peg.2448 CDS gi|344045623|gb|AFYA01000005.1| 145772 144423 -2 - 1350 putative multidrug resistance protein - none -
fig|6666666.67468.peg.2449 CDS gi|344045623|gb|AFYA01000005.1| 146990 145773 -2 - 1218 putative multidrug resistance protein - none -
fig|6666666.67468.peg.2450 CDS gi|344045623|gb|AFYA01000005.1| 147127 147600 1 + 474 FIG00547362: hypothetical protein - none -
fig|6666666.67468.peg.2451 CDS gi|344045623|gb|AFYA01000005.1| 148490 147657 -2 - 834 FIG00544678: hypothetical protein - none -
fig|6666666.67468.peg.2452 CDS gi|344045623|gb|AFYA01000005.1| 149214 148585 -3 - 630 FIG00547507: hypothetical protein - none -
fig|6666666.67468.peg.2453 CDS gi|344045623|gb|AFYA01000005.1| 150879 149239 -3 - 1641 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67468.peg.2454 CDS gi|344045623|gb|AFYA01000005.1| 151171 151046 -1 - 126 hypothetical protein - none -
fig|6666666.67468.peg.2455 CDS gi|344045623|gb|AFYA01000005.1| 151170 151976 3 + 807 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67468.peg.2456 CDS gi|344045623|gb|AFYA01000005.1| 152008 152727 1 + 720 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.67468.peg.2457 CDS gi|344045623|gb|AFYA01000005.1| 152797 156540 1 + 3744 FIG00543822: hypothetical protein - none -
fig|6666666.67468.peg.2458 CDS gi|344045623|gb|AFYA01000005.1| 156959 160348 2 + 3390 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67468.peg.2459 CDS gi|344045623|gb|AFYA01000005.1| 160448 160981 2 + 534 hypothetical protein - none -
fig|6666666.67468.peg.2460 CDS gi|344045623|gb|AFYA01000005.1| 161641 160973 -1 - 669 FIG00544048: hypothetical protein - none -
fig|6666666.67468.peg.2461 CDS gi|344045623|gb|AFYA01000005.1| 162154 161657 -1 - 498 PROBABLE TRANSMEMBRANE PROTEIN - none -
fig|6666666.67468.peg.2462 CDS gi|344045623|gb|AFYA01000005.1| 162279 163529 3 + 1251 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67468.peg.2463 CDS gi|344045623|gb|AFYA01000005.1| 163522 164103 1 + 582 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.67468.peg.2464 CDS gi|344045623|gb|AFYA01000005.1| 164136 165263 3 + 1128 Mrp protein homolog - none -
fig|6666666.67468.peg.2465 CDS gi|344045623|gb|AFYA01000005.1| 165737 165267 -2 - 471 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67468.peg.2466 CDS gi|344045623|gb|AFYA01000005.1| 166283 165789 -2 - 495 FIG00544000: hypothetical protein - none -
fig|6666666.67468.peg.2467 CDS gi|344045623|gb|AFYA01000005.1| 167113 166472 -1 - 642 putative RNA polymerase sigma factor - none -
fig|6666666.67468.peg.2468 CDS gi|344045623|gb|AFYA01000005.1| 167247 167888 3 + 642 FIG00945644: hypothetical protein - none -
fig|6666666.67468.peg.2469 CDS gi|344045623|gb|AFYA01000005.1| 169169 167940 -2 - 1230 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.67468.peg.2470 CDS gi|344045623|gb|AFYA01000005.1| 169323 170483 3 + 1161 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.67468.peg.2471 CDS gi|344045623|gb|AFYA01000005.1| 170628 172124 3 + 1497 levanase/invertase - none -
fig|6666666.67468.peg.2472 CDS gi|344045623|gb|AFYA01000005.1| 172994 172128 -2 - 867 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67468.peg.2473 CDS gi|344045623|gb|AFYA01000005.1| 173224 173057 -1 - 168 FIG00545868: hypothetical protein - none -
fig|6666666.67468.peg.2474 CDS gi|344045623|gb|AFYA01000005.1| 173592 173284 -3 - 309 FIG00545506: hypothetical protein - none -
fig|6666666.67468.peg.2475 CDS gi|344045623|gb|AFYA01000005.1| 174320 173604 -2 - 717 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.67468.peg.2476 CDS gi|344045623|gb|AFYA01000005.1| 175165 174332 -1 - 834 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.67468.peg.2477 CDS gi|344045623|gb|AFYA01000005.1| 175957 175187 -1 - 771 FIG00543965: hypothetical protein - none -
fig|6666666.67468.peg.2478 CDS gi|344045623|gb|AFYA01000005.1| 177128 176019 -2 - 1110 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.2479 CDS gi|344045623|gb|AFYA01000005.1| 177183 178133 3 + 951 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.2480 CDS gi|344045623|gb|AFYA01000005.1| 178176 179567 3 + 1392 Aromatic amino acid transport protein AroP - none -
fig|6666666.67468.peg.2481 CDS gi|344045623|gb|AFYA01000005.1| 179596 180489 1 + 894 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.2482 CDS gi|344045780|gb|AFYA01000004.1| 1090 131 -1 - 960 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67468.peg.2483 CDS gi|344045780|gb|AFYA01000004.1| 1383 1102 -3 - 282 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) Pterin carbinolamine dehydratase
fig|6666666.67468.peg.2484 CDS gi|344045780|gb|AFYA01000004.1| 1412 2017 2 + 606 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.67468.peg.2485 CDS gi|344045780|gb|AFYA01000004.1| 2029 3045 1 + 1017 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67468.peg.2486 CDS gi|344045780|gb|AFYA01000004.1| 3056 4687 2 + 1632 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67468.peg.2487 CDS gi|344045780|gb|AFYA01000004.1| 4688 5131 2 + 444 FIG00543979: hypothetical protein - none -
fig|6666666.67468.peg.2488 CDS gi|344045780|gb|AFYA01000004.1| 5255 6478 2 + 1224 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67468.peg.2489 CDS gi|344045780|gb|AFYA01000004.1| 6608 7969 2 + 1362 D-serine/D-alanine/glycine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67468.peg.2490 CDS gi|344045780|gb|AFYA01000004.1| 7994 8686 2 + 693 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67468.peg.2491 CDS gi|344045780|gb|AFYA01000004.1| 9944 8670 -2 - 1275 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67468.peg.2492 CDS gi|344045780|gb|AFYA01000004.1| 10161 10009 -3 - 153 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67468.peg.2493 CDS gi|344045780|gb|AFYA01000004.1| 10212 11141 3 + 930 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67468.peg.2494 CDS gi|344045780|gb|AFYA01000004.1| 12838 13173 1 + 336 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67468.peg.2495 CDS gi|344045780|gb|AFYA01000004.1| 13401 14372 3 + 972 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67468.peg.2496 CDS gi|344045780|gb|AFYA01000004.1| 14639 15073 2 + 435 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67468.peg.2497 CDS gi|344045780|gb|AFYA01000004.1| 15195 15905 3 + 711 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67468.peg.2498 CDS gi|344045780|gb|AFYA01000004.1| 17470 15956 -1 - 1515 putative regulatory protein - none -
fig|6666666.67468.peg.2499 CDS gi|344045780|gb|AFYA01000004.1| 17611 18957 1 + 1347 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.67468.peg.2500 CDS gi|344045780|gb|AFYA01000004.1| 18959 20320 2 + 1362 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67468.peg.2501 CDS gi|344045780|gb|AFYA01000004.1| 20359 21606 1 + 1248 FIG00545831: hypothetical protein - none -
fig|6666666.67468.peg.2502 CDS gi|344045780|gb|AFYA01000004.1| 21732 23684 3 + 1953 Cadmium-transporting ATPase (EC 3.6.3.3) Cobalt-zinc-cadmium resistance
fig|6666666.67468.peg.2503 CDS gi|344045780|gb|AFYA01000004.1| 23703 25118 3 + 1416 Phytoene dehydrogenase and related proteins Carotenoids
fig|6666666.67468.peg.2504 CDS gi|344045780|gb|AFYA01000004.1| 25128 25733 3 + 606 FIG00546999: hypothetical protein - none -
fig|6666666.67468.peg.2505 CDS gi|344045780|gb|AFYA01000004.1| 26032 26547 1 + 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67468.peg.2506 CDS gi|344045780|gb|AFYA01000004.1| 26625 27011 3 + 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67468.peg.2507 CDS gi|344045780|gb|AFYA01000004.1| 27142 27020 -1 - 123 FIG00549123: hypothetical protein - none -
fig|6666666.67468.peg.2508 CDS gi|344045780|gb|AFYA01000004.1| 27565 28539 1 + 975 FIG00545886: hypothetical protein - none -
fig|6666666.67468.peg.2509 CDS gi|344045780|gb|AFYA01000004.1| 28960 32439 1 + 3480 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67468.peg.2510 CDS gi|344045780|gb|AFYA01000004.1| 32523 36524 3 + 4002 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67468.peg.2511 CDS gi|344045780|gb|AFYA01000004.1| 36702 36884 3 + 183 FIG00546500: hypothetical protein - none -
fig|6666666.67468.peg.2512 CDS gi|344045780|gb|AFYA01000004.1| 36896 37678 2 + 783 putative DNA-binding protein - none -
fig|6666666.67468.peg.2513 CDS gi|344045780|gb|AFYA01000004.1| 38402 37707 -2 - 696 FIG00545089: hypothetical protein - none -
fig|6666666.67468.peg.2514 CDS gi|344045780|gb|AFYA01000004.1| 38725 39093 1 + 369 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67468.peg.2515 CDS gi|344045780|gb|AFYA01000004.1| 39100 39567 1 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67468.peg.2516 CDS gi|344045780|gb|AFYA01000004.1| 39915 42044 3 + 2130 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67468.peg.2517 CDS gi|344045780|gb|AFYA01000004.1| 42010 42126 1 + 117 hypothetical protein - none -
fig|6666666.67468.peg.2518 CDS gi|344045780|gb|AFYA01000004.1| 42442 42317 -1 - 126 FIG00548059: hypothetical protein - none -
fig|6666666.67468.peg.2519 CDS gi|344045780|gb|AFYA01000004.1| 42407 43597 2 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67468.peg.2520 CDS gi|344045780|gb|AFYA01000004.1| 44097 44798 3 + 702 FIG00544889: hypothetical protein - none -
fig|6666666.67468.peg.2521 CDS gi|344045780|gb|AFYA01000004.1| 45597 44803 -3 - 795 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67468.peg.2522 CDS gi|344045780|gb|AFYA01000004.1| 46788 45616 -3 - 1173 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67468.peg.2523 CDS gi|344045780|gb|AFYA01000004.1| 47824 46778 -1 - 1047 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67468.peg.2524 CDS gi|344045780|gb|AFYA01000004.1| 49170 48163 -3 - 1008 Transcriptional regulator, AraC family - none -
fig|6666666.67468.peg.2525 CDS gi|344045780|gb|AFYA01000004.1| 49239 50756 3 + 1518 putative coenzyme A transferase - none -
fig|6666666.67468.peg.2526 CDS gi|344045780|gb|AFYA01000004.1| 51329 51634 2 + 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.67468.peg.2527 CDS gi|344045780|gb|AFYA01000004.1| 51667 52323 1 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67468.peg.2528 CDS gi|344045780|gb|AFYA01000004.1| 52320 52976 3 + 657 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67468.peg.2529 CDS gi|344045780|gb|AFYA01000004.1| 52976 53281 2 + 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67468.peg.2530 CDS gi|344045780|gb|AFYA01000004.1| 53306 54148 2 + 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67468.peg.2531 CDS gi|344045780|gb|AFYA01000004.1| 54165 54443 3 + 279 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.67468.peg.2532 CDS gi|344045780|gb|AFYA01000004.1| 54447 54809 3 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67468.peg.2533 CDS gi|344045780|gb|AFYA01000004.1| 54809 55555 2 + 747 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.67468.peg.2534 CDS gi|344045780|gb|AFYA01000004.1| 55558 55974 1 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67468.peg.2535 CDS gi|344045780|gb|AFYA01000004.1| 55974 56204 3 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67468.peg.2536 CDS gi|344045780|gb|AFYA01000004.1| 56207 56485 2 + 279 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.67468.peg.2537 CDS gi|344045780|gb|AFYA01000004.1| 56877 56608 -3 - 270 FIG00545568: hypothetical protein - none -
fig|6666666.67468.peg.2538 CDS gi|344045780|gb|AFYA01000004.1| 57649 56945 -1 - 705 FIG00545133: hypothetical protein - none -
fig|6666666.67468.peg.2539 CDS gi|344045780|gb|AFYA01000004.1| 57977 58345 2 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67468.peg.2540 CDS gi|344045780|gb|AFYA01000004.1| 58348 58662 1 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67468.peg.2541 CDS gi|344045780|gb|AFYA01000004.1| 58662 59237 3 + 576 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67468.peg.2542 CDS gi|344045780|gb|AFYA01000004.1| 59350 60318 1 + 969 FIG00544934: hypothetical protein - none -
fig|6666666.67468.peg.2543 CDS gi|344045780|gb|AFYA01000004.1| 61132 60323 -1 - 810 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67468.peg.2544 CDS gi|344045780|gb|AFYA01000004.1| 61648 61154 -1 - 495 FIG00549370: hypothetical protein - none -
fig|6666666.67468.peg.2545 CDS gi|344045780|gb|AFYA01000004.1| 62577 61648 -3 - 930 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67468.peg.2546 CDS gi|344045780|gb|AFYA01000004.1| 62888 62580 -2 - 309 FIG00545055: hypothetical protein - none -
fig|6666666.67468.peg.2547 CDS gi|344045780|gb|AFYA01000004.1| 65259 63001 -3 - 2259 Putative formate dehydrogenase oxidoreductase protein Formate hydrogenase
fig|6666666.67468.peg.2548 CDS gi|344045780|gb|AFYA01000004.1| 65705 66331 2 + 627 FIG00546548: hypothetical protein - none -
fig|6666666.67468.peg.2549 CDS gi|344045780|gb|AFYA01000004.1| 67236 66430 -3 - 807 Substrate-specific component CbrT of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.67468.peg.2550 CDS gi|344045780|gb|AFYA01000004.1| 68942 67233 -2 - 1710 Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.67468.peg.2551 CDS gi|344045780|gb|AFYA01000004.1| 70069 68942 -1 - 1128 Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter ECF class transporters
fig|6666666.67468.peg.2552 CDS gi|344045780|gb|AFYA01000004.1| 71167 70097 -1 - 1071 FIG00544538: hypothetical protein - none -
fig|6666666.67468.peg.2553 CDS gi|344045780|gb|AFYA01000004.1| 72375 71188 -3 - 1188 FIG00544765: hypothetical protein - none -
fig|6666666.67468.peg.2554 CDS gi|344045780|gb|AFYA01000004.1| 73181 72696 -2 - 486 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67468.peg.2555 CDS gi|344045780|gb|AFYA01000004.1| 73578 73976 3 + 399 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.67468.peg.2556 CDS gi|344045780|gb|AFYA01000004.1| 73996 74532 1 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67468.peg.2557 CDS gi|344045780|gb|AFYA01000004.1| 74536 74940 1 + 405 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67468.peg.2558 CDS gi|344045780|gb|AFYA01000004.1| 74981 75616 2 + 636 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.67468.peg.2559 CDS gi|344045780|gb|AFYA01000004.1| 75620 75805 2 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67468.peg.2560 CDS gi|344045780|gb|AFYA01000004.1| 75812 76258 2 + 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67468.peg.2561 CDS gi|344045780|gb|AFYA01000004.1| 78135 76783 -3 - 1353 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67468.peg.2562 CDS gi|344045780|gb|AFYA01000004.1| 79578 78262 -3 - 1317 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) - none -
fig|6666666.67468.peg.2563 CDS gi|344045780|gb|AFYA01000004.1| 80525 79896 -2 - 630 Transcriptional regulator, TetR family - none -
fig|6666666.67468.peg.2564 CDS gi|344045780|gb|AFYA01000004.1| 80686 81123 1 + 438 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.67468.peg.2565 CDS gi|344045780|gb|AFYA01000004.1| 81303 82277 3 + 975 Phenylacetate-CoA oxygenase, PaaG subunit - none -
fig|6666666.67468.peg.2566 CDS gi|344045780|gb|AFYA01000004.1| 82299 82586 3 + 288 Phenylacetate-CoA oxygenase, PaaH subunit - none -
fig|6666666.67468.peg.2567 CDS gi|344045780|gb|AFYA01000004.1| 82583 83416 2 + 834 Phenylacetate-CoA oxygenase, PaaI subunit - none -
fig|6666666.67468.peg.2568 CDS gi|344045780|gb|AFYA01000004.1| 83467 84003 1 + 537 Phenylacetate-CoA oxygenase, PaaJ subunit - none -
fig|6666666.67468.peg.2569 CDS gi|344045780|gb|AFYA01000004.1| 84003 85157 3 + 1155 Phenylacetate-CoA oxygenase/reductase, PaaK subunit - none -
fig|6666666.67468.peg.2570 CDS gi|344045780|gb|AFYA01000004.1| 85170 85955 3 + 786 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67468.peg.2571 CDS gi|344045780|gb|AFYA01000004.1| 86016 87221 3 + 1206 Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Chloroaromatic degradation pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67468.peg.2572 CDS gi|344045780|gb|AFYA01000004.1| 87228 87977 3 + 750 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67468.peg.2573 CDS gi|344045780|gb|AFYA01000004.1| 88003 88854 1 + 852 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Polyhydroxybutyrate metabolism
fig|6666666.67468.peg.2574 CDS gi|344045780|gb|AFYA01000004.1| 89252 88851 -2 - 402 FIG00548554: hypothetical protein - none -
fig|6666666.67468.peg.2575 CDS gi|344045780|gb|AFYA01000004.1| 89368 91464 1 + 2097 Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Aromatic Amin Catabolism
fig|6666666.67468.peg.2576 CDS gi|344045780|gb|AFYA01000004.1| 91913 91548 -2 - 366 hypothetical membrane protein - none -
fig|6666666.67468.peg.2577 CDS gi|344045780|gb|AFYA01000004.1| 93577 92084 -1 - 1494 NAD-dependent aldehyde dehydrogenase - none -
fig|6666666.67468.peg.2578 CDS gi|344045780|gb|AFYA01000004.1| 94311 93574 -3 - 738 FIG00546671: hypothetical protein - none -
fig|6666666.67468.peg.2579 CDS gi|344045780|gb|AFYA01000004.1| 95576 94308 -2 - 1269 putative rubredoxin reductase - none -
fig|6666666.67468.peg.2580 CDS gi|344045780|gb|AFYA01000004.1| 95906 95586 -2 - 321 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Iron-sulfur cluster assembly;
Soluble cytochromes and functionally related electron carriers
fig|6666666.67468.peg.2581 CDS gi|344045780|gb|AFYA01000004.1| 96685 95933 -1 - 753 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67468.peg.2582 CDS gi|344045780|gb|AFYA01000004.1| 98573 96672 -2 - 1902 Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, C-terminal domain Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.2583 CDS gi|344045780|gb|AFYA01000004.1| 99714 98620 -3 - 1095 Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, N-terminal domain Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.2584 CDS gi|344045780|gb|AFYA01000004.1| 101043 99739 -3 - 1305 putative cytochrome P450 hydroxylase - none -
fig|6666666.67468.peg.2585 CDS gi|344045780|gb|AFYA01000004.1| 102034 101228 -1 - 807 Transcriptional regulator, IclR family - none -
fig|6666666.67468.peg.2586 CDS gi|344045780|gb|AFYA01000004.1| 102410 103732 2 + 1323 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67468.peg.2587 CDS gi|344045780|gb|AFYA01000004.1| 103732 104277 1 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67468.peg.2588 CDS gi|344045780|gb|AFYA01000004.1| 104434 105228 1 + 795 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67468.peg.2589 CDS gi|344045780|gb|AFYA01000004.1| 105389 106138 2 + 750 Putative secreted protein - none -
fig|6666666.67468.peg.2590 CDS gi|344045780|gb|AFYA01000004.1| 106350 107516 3 + 1167 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67468.peg.2591 CDS gi|344045780|gb|AFYA01000004.1| 107526 108584 3 + 1059 hypothetical protein - none -
fig|6666666.67468.peg.2592 CDS gi|344045780|gb|AFYA01000004.1| 111212 110205 -2 - 1008 UDP-glucose 4-epimerase (EC 5.1.3.2) N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67468.peg.2593 CDS gi|344045780|gb|AFYA01000004.1| 113086 111200 -1 - 1887 Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12) - none -
fig|6666666.67468.peg.2594 CDS gi|344045780|gb|AFYA01000004.1| 114036 113083 -3 - 954 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67468.peg.2595 CDS gi|344045780|gb|AFYA01000004.1| 114661 114879 1 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67468.peg.2596 CDS gi|344045780|gb|AFYA01000004.1| 115070 115438 2 + 369 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.67468.peg.2597 CDS gi|344045780|gb|AFYA01000004.1| 115441 115845 1 + 405 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.67468.peg.2598 CDS gi|344045780|gb|AFYA01000004.1| 115869 116474 3 + 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.67468.peg.2599 CDS gi|344045780|gb|AFYA01000004.1| 116592 117608 3 + 1017 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67468.peg.2600 CDS gi|344045780|gb|AFYA01000004.1| 117664 118170 1 + 507 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67468.peg.2601 CDS gi|344045780|gb|AFYA01000004.1| 118311 119195 3 + 885 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67468.peg.2602 CDS gi|344045780|gb|AFYA01000004.1| 119302 121701 1 + 2400 FIG00546597: hypothetical protein - none -
fig|6666666.67468.peg.2603 CDS gi|344045780|gb|AFYA01000004.1| 122100 121702 -3 - 399 acetyltransferase, GNAT family - none -
fig|6666666.67468.peg.2604 CDS gi|344045780|gb|AFYA01000004.1| 122675 123934 2 + 1260 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67468.peg.2605 CDS gi|344045780|gb|AFYA01000004.1| 123953 125500 2 + 1548 FAD/FMN-containing dehydrogenases - none -
fig|6666666.67468.peg.2606 CDS gi|344045780|gb|AFYA01000004.1| 125612 126892 2 + 1281 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67468.peg.2607 CDS gi|344045780|gb|AFYA01000004.1| 127093 127521 1 + 429 FIG00544350: hypothetical protein - none -
fig|6666666.67468.peg.2608 CDS gi|344045780|gb|AFYA01000004.1| 128910 127666 -3 - 1245 subtilase family protein - none -
fig|6666666.67468.peg.2609 CDS gi|344045780|gb|AFYA01000004.1| 130294 128912 -1 - 1383 FIG00544388: hypothetical protein - none -
fig|6666666.67468.peg.2610 CDS gi|344045780|gb|AFYA01000004.1| 130509 131870 3 + 1362 FtsK/SpoIIIE family protein - none -
fig|6666666.67468.peg.2611 CDS gi|344045780|gb|AFYA01000004.1| 131836 133338 1 + 1503 putative integrase/recombinase - none -
fig|6666666.67468.peg.2612 CDS gi|344045780|gb|AFYA01000004.1| 137095 137799 1 + 705 hypothetical protein - none -
fig|6666666.67468.peg.2613 CDS gi|344045780|gb|AFYA01000004.1| 138314 140119 2 + 1806 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67468.peg.2614 CDS gi|344045780|gb|AFYA01000004.1| 140116 141294 1 + 1179 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67468.peg.2615 CDS gi|344045780|gb|AFYA01000004.1| 141315 144389 3 + 3075 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67468.peg.2616 CDS gi|344045780|gb|AFYA01000004.1| 146417 145272 -2 - 1146 DNA-binding protein - none -
fig|6666666.67468.peg.2617 CDS gi|344045780|gb|AFYA01000004.1| 147600 146758 -3 - 843 hypothetical protein - none -
fig|6666666.67468.peg.2618 CDS gi|344045780|gb|AFYA01000004.1| 147860 147687 -2 - 174 hypothetical protein - none -
fig|6666666.67468.peg.2619 CDS gi|344045780|gb|AFYA01000004.1| 148938 147928 -3 - 1011 RESOLVASE FAMILY RECOMBINASE - none -
fig|6666666.67468.peg.2620 CDS gi|344045780|gb|AFYA01000004.1| 150572 149250 -2 - 1323 pentapeptide repeat family protein - none -
fig|6666666.67468.peg.2621 CDS gi|344045780|gb|AFYA01000004.1| 150908 152221 2 + 1314 hypothetical protein - none -
fig|6666666.67468.peg.2622 CDS gi|344045780|gb|AFYA01000004.1| 152436 152729 3 + 294 hypothetical protein - none -
fig|6666666.67468.peg.2623 CDS gi|344045780|gb|AFYA01000004.1| 153332 153586 2 + 255 hypothetical protein - none -
fig|6666666.67468.peg.2624 CDS gi|344045780|gb|AFYA01000004.1| 153728 153850 2 + 123 hypothetical protein - none -
fig|6666666.67468.peg.2625 CDS gi|344045780|gb|AFYA01000004.1| 154608 153865 -3 - 744 Mobile element protein - none -
fig|6666666.67468.peg.2626 CDS gi|344045780|gb|AFYA01000004.1| 154669 156675 1 + 2007 hypothetical protein - none -
fig|6666666.67468.peg.2627 CDS gi|344045780|gb|AFYA01000004.1| 156678 157694 3 + 1017 hypothetical protein - none -
fig|6666666.67468.peg.2628 CDS gi|344045780|gb|AFYA01000004.1| 157925 158614 2 + 690 Mobile element protein - none -
fig|6666666.67468.peg.2629 CDS gi|344045780|gb|AFYA01000004.1| 158913 159068 3 + 156 Mobile element protein - none -
fig|6666666.67468.peg.2630 CDS gi|344045780|gb|AFYA01000004.1| 159586 160620 1 + 1035 hypothetical protein - none -
fig|6666666.67468.peg.2631 CDS gi|344045780|gb|AFYA01000004.1| 160678 160806 1 + 129 hypothetical protein - none -
fig|6666666.67468.peg.2632 CDS gi|344045780|gb|AFYA01000004.1| 161126 161389 2 + 264 Mobile element protein - none -
fig|6666666.67468.peg.2633 CDS gi|344045780|gb|AFYA01000004.1| 163086 163241 3 + 156 hypothetical protein - none -
fig|6666666.67468.peg.2634 CDS gi|344045780|gb|AFYA01000004.1| 163615 164463 1 + 849 hypothetical protein - none -
fig|6666666.67468.peg.2635 CDS gi|344045780|gb|AFYA01000004.1| 169184 164985 -2 - 4200 hypothetical protein - none -
fig|6666666.67468.peg.2636 CDS gi|344045780|gb|AFYA01000004.1| 170275 172491 1 + 2217 FtsK/SpoIIIE family protein - none -
fig|6666666.67468.peg.2637 CDS gi|344045780|gb|AFYA01000004.1| 172488 173390 3 + 903 FIG00543916: hypothetical protein - none -
fig|6666666.67468.peg.2638 CDS gi|344045780|gb|AFYA01000004.1| 173561 173887 2 + 327 FIG00543840: hypothetical protein - none -
fig|6666666.67468.peg.2639 CDS gi|344045780|gb|AFYA01000004.1| 173920 174210 1 + 291 FIG00544893: hypothetical protein - none -
fig|6666666.67468.peg.2640 CDS gi|344045780|gb|AFYA01000004.1| 174564 175007 3 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67468.peg.2641 CDS gi|344045780|gb|AFYA01000004.1| 175007 175555 2 + 549 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.67468.peg.2642 CDS gi|344045780|gb|AFYA01000004.1| 175530 175739 3 + 210 hypothetical protein - none -
fig|6666666.67468.peg.2643 CDS gi|344045780|gb|AFYA01000004.1| 175744 177087 1 + 1344 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67468.peg.2644 CDS gi|344045780|gb|AFYA01000004.1| 177871 177635 -1 - 237 hypothetical protein - none -
fig|6666666.67468.peg.2645 CDS gi|344045780|gb|AFYA01000004.1| 177934 179388 1 + 1455 No significant database matches. High concentration of alanine, glycine and proline residues - none -
fig|6666666.67468.peg.2646 CDS gi|344045780|gb|AFYA01000004.1| 179391 179618 3 + 228 FIG00546731: hypothetical protein - none -
fig|6666666.67468.peg.2647 CDS gi|344045780|gb|AFYA01000004.1| 180559 179702 -1 - 858 FIG00545792: hypothetical protein - none -
fig|6666666.67468.peg.2648 CDS gi|344045780|gb|AFYA01000004.1| 180654 181739 3 + 1086 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67468.peg.2649 CDS gi|344045780|gb|AFYA01000004.1| 181763 182260 2 + 498 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67468.peg.2650 CDS gi|344045780|gb|AFYA01000004.1| 182494 184095 1 + 1602 putative transport protein - none -
fig|6666666.67468.peg.2651 CDS gi|344045780|gb|AFYA01000004.1| 184111 185394 1 + 1284 putative aminopeptidase - none -
fig|6666666.67468.peg.2652 CDS gi|344045780|gb|AFYA01000004.1| 185401 186078 1 + 678 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.67468.peg.2653 CDS gi|344045780|gb|AFYA01000004.1| 186075 186584 3 + 510 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67468.peg.2654 CDS gi|344045780|gb|AFYA01000004.1| 186588 187622 3 + 1035 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67468.peg.2655 CDS gi|344045780|gb|AFYA01000004.1| 187641 189365 3 + 1725 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67468.peg.2656 CDS gi|344045780|gb|AFYA01000004.1| 189439 189861 1 + 423 FIG00543939: hypothetical protein - none -
fig|6666666.67468.peg.2657 CDS gi|344045780|gb|AFYA01000004.1| 190031 190330 2 + 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67468.peg.2658 CDS gi|344045780|gb|AFYA01000004.1| 190342 191958 1 + 1617 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67468.peg.2659 CDS gi|344045780|gb|AFYA01000004.1| 192396 192097 -3 - 300 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.67468.peg.2660 CDS gi|344045780|gb|AFYA01000004.1| 192838 193404 1 + 567 putative RNA polymerase sigma factor - none -
fig|6666666.67468.peg.2661 CDS gi|344045780|gb|AFYA01000004.1| 193404 194432 3 + 1029 FIG00544252: hypothetical protein - none -
fig|6666666.67468.peg.2662 CDS gi|344045780|gb|AFYA01000004.1| 194904 194482 -3 - 423 FIG00544572: hypothetical protein - none -
fig|6666666.67468.peg.2663 CDS gi|344045780|gb|AFYA01000004.1| 195018 196538 3 + 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67468.peg.2664 CDS gi|344045780|gb|AFYA01000004.1| 196655 197779 2 + 1125 Inosine-5@1-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67468.peg.2665 CDS gi|344045780|gb|AFYA01000004.1| 198678 197776 -3 - 903 FIG00547072: hypothetical protein - none -
fig|6666666.67468.peg.2666 CDS gi|344045780|gb|AFYA01000004.1| 198769 199680 1 + 912 transcriptional regulator - none -
fig|6666666.67468.peg.2667 CDS gi|344045780|gb|AFYA01000004.1| 199687 201258 1 + 1572 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) GMP synthase;
GMP synthase;
Purine conversions;
Purine conversions;
Purine salvage cluster;
Purine salvage cluster
fig|6666666.67468.peg.2668 CDS gi|344045780|gb|AFYA01000004.1| 201400 201843 1 + 444 FIG00548619: hypothetical protein - none -
fig|6666666.67468.peg.2669 CDS gi|344045780|gb|AFYA01000004.1| 201952 202113 1 + 162 hypothetical protein - none -
fig|6666666.67468.peg.2670 CDS gi|344045780|gb|AFYA01000004.1| 203288 202110 -2 - 1179 FIG00543896: hypothetical protein - none -
fig|6666666.67468.peg.2671 CDS gi|344045780|gb|AFYA01000004.1| 203324 204595 2 + 1272 FIG00545356: hypothetical protein - none -
fig|6666666.67468.peg.2672 CDS gi|344045780|gb|AFYA01000004.1| 204638 205330 2 + 693 two-component system response regulator - none -
fig|6666666.67468.peg.2673 CDS gi|344045780|gb|AFYA01000004.1| 205330 205656 1 + 327 FIG00545838: hypothetical protein - none -
fig|6666666.67468.peg.2674 CDS gi|344045780|gb|AFYA01000004.1| 206154 205720 -3 - 435 hypothetical membrane protein - none -
fig|6666666.67468.peg.2675 CDS gi|344045780|gb|AFYA01000004.1| 207174 206701 -3 - 474 hypothetical protein - none -
fig|6666666.67468.peg.2676 CDS gi|344045780|gb|AFYA01000004.1| 208934 207462 -2 - 1473 hypothetical protein - none -
fig|6666666.67468.peg.2677 CDS gi|344045780|gb|AFYA01000004.1| 209122 209889 1 + 768 FIG00544716: hypothetical protein - none -
fig|6666666.67468.peg.2678 CDS gi|344045780|gb|AFYA01000004.1| 209886 211478 3 + 1593 DNA polymerase-like protein PA0670 - none -
fig|6666666.67468.peg.2679 CDS gi|344045780|gb|AFYA01000004.1| 212145 211483 -3 - 663 No significant database matches - none -
fig|6666666.67468.peg.2680 CDS gi|344045780|gb|AFYA01000004.1| 212284 213147 1 + 864 FIG00546271: hypothetical protein - none -
fig|6666666.67468.peg.2681 CDS gi|344045780|gb|AFYA01000004.1| 214019 213156 -2 - 864 Lycopene elongase (EC 2.5.1.-) Carotenoids
fig|6666666.67468.peg.2682 CDS gi|344045780|gb|AFYA01000004.1| 214264 214022 -1 - 243 C50 carotenoid epsilon cyclase Carotenoids
fig|6666666.67468.peg.2683 CDS gi|344045780|gb|AFYA01000004.1| 214614 214411 -3 - 204 C50 carotenoid epsilon cyclase Carotenoids
fig|6666666.67468.peg.2684 CDS gi|344045780|gb|AFYA01000004.1| 216510 214864 -3 - 1647 Phytoene dehydrogenase (EC 1.14.99.-) Carotenoids;
Protein deglycation
fig|6666666.67468.peg.2685 CDS gi|344045780|gb|AFYA01000004.1| 217424 216507 -2 - 918 Phytoene synthase (EC 2.5.1.32) Carotenoids;
Protein deglycation
fig|6666666.67468.peg.2686 CDS gi|344045780|gb|AFYA01000004.1| 219538 217421 -1 - 2118 FIG00545392: hypothetical protein - none -
fig|6666666.67468.peg.2687 CDS gi|344045780|gb|AFYA01000004.1| 220767 219649 -3 - 1119 Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoinds for Quinones
fig|6666666.67468.peg.2688 CDS gi|344045780|gb|AFYA01000004.1| 220958 221545 2 + 588 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.2689 CDS gi|344045780|gb|AFYA01000004.1| 222221 221571 -2 - 651 FIG00547498: hypothetical protein - none -
fig|6666666.67468.peg.2690 CDS gi|344045780|gb|AFYA01000004.1| 222379 223902 1 + 1524 Predicted nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.67468.peg.2691 CDS gi|344045780|gb|AFYA01000004.1| 225343 223895 -1 - 1449 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase;
EC699-706
fig|6666666.67468.peg.2692 CDS gi|344045780|gb|AFYA01000004.1| 225368 226123 2 + 756 cell wall biogenesis glycosyltransferase - none -
fig|6666666.67468.peg.2693 CDS gi|344045780|gb|AFYA01000004.1| 228931 226514 -1 - 2418 FIG00547001: hypothetical protein - none -
fig|6666666.67468.peg.2694 CDS gi|344045780|gb|AFYA01000004.1| 229651 228932 -1 - 720 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.2695 CDS gi|344045780|gb|AFYA01000004.1| 230455 229778 -1 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67468.peg.2696 CDS gi|344045780|gb|AFYA01000004.1| 231534 230452 -3 - 1083 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67468.peg.2697 CDS gi|344045780|gb|AFYA01000004.1| 232628 231729 -2 - 900 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67468.peg.2698 CDS gi|344045780|gb|AFYA01000004.1| 232788 235955 3 + 3168 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67468.peg.2699 CDS gi|344045780|gb|AFYA01000004.1| 235974 236465 3 + 492 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.67468.peg.2700 CDS gi|344045780|gb|AFYA01000004.1| 236462 237877 2 + 1416 transmembrane protein, distant homology with ydbT - none -
fig|6666666.67468.peg.2701 CDS gi|344045780|gb|AFYA01000004.1| 237887 238558 2 + 672 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67468.peg.2702 CDS gi|344045780|gb|AFYA01000004.1| 239318 238542 -2 - 777 FIG00545808: hypothetical protein - none -
fig|6666666.67468.peg.2703 CDS gi|344045780|gb|AFYA01000004.1| 239495 240271 2 + 777 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67468.peg.2704 CDS gi|344045780|gb|AFYA01000004.1| 240273 240767 3 + 495 FIG00544661: hypothetical protein - none -
fig|6666666.67468.peg.2705 CDS gi|344045780|gb|AFYA01000004.1| 240883 241881 1 + 999 FIG00545274: hypothetical protein - none -
fig|6666666.67468.peg.2706 CDS gi|344045780|gb|AFYA01000004.1| 242459 241986 -2 - 474 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) ## TrmL Biotin synthesis cluster;
RNA methylation
fig|6666666.67468.peg.2707 CDS gi|344045780|gb|AFYA01000004.1| 242505 243359 3 + 855 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67468.peg.2708 CDS gi|344045780|gb|AFYA01000004.1| 243366 243716 3 + 351 FIG00546438: hypothetical protein - none -
fig|6666666.67468.peg.2709 CDS gi|344045780|gb|AFYA01000004.1| 245099 243693 -2 - 1407 Inner membrane protein YqiK - none -
fig|6666666.67468.peg.2710 CDS gi|344045780|gb|AFYA01000004.1| 246546 245722 -3 - 825 FIG00547680: hypothetical protein - none -
fig|6666666.67468.peg.2711 CDS gi|344045780|gb|AFYA01000004.1| 247747 246821 -1 - 927 transcriptional regulator, LysR family - none -
fig|6666666.67468.peg.2712 CDS gi|344045780|gb|AFYA01000004.1| 249209 247845 -2 - 1365 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67468.peg.2713 CDS gi|344045780|gb|AFYA01000004.1| 250321 249413 -1 - 909 transcriptional regulator, LysR family - none -
fig|6666666.67468.peg.2714 CDS gi|344045780|gb|AFYA01000004.1| 250512 251813 3 + 1302 monooxygenase, putative - none -
fig|6666666.67468.peg.2715 CDS gi|344045780|gb|AFYA01000004.1| 251864 252274 2 + 411 endoribonuclease L-PSP family protein - none -
fig|6666666.67468.peg.2716 CDS gi|344045780|gb|AFYA01000004.1| 252322 252945 1 + 624 hypothetical protein - none -
fig|6666666.67468.peg.2717 CDS gi|344045780|gb|AFYA01000004.1| 252938 254077 2 + 1140 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67468.peg.2718 CDS gi|344045780|gb|AFYA01000004.1| 255270 254137 -3 - 1134 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67468.peg.2719 CDS gi|344045780|gb|AFYA01000004.1| 256728 255415 -3 - 1314 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67468.peg.2720 CDS gi|344045780|gb|AFYA01000004.1| 257108 259426 2 + 2319 Carbon starvation protein A Carbon Starvation
fig|6666666.67468.peg.2721 CDS gi|344045780|gb|AFYA01000004.1| 259430 259633 2 + 204 hypothetical protein - none -
fig|6666666.67468.peg.2722 CDS gi|344045780|gb|AFYA01000004.1| 259792 259959 1 + 168 hypothetical protein - none -
fig|6666666.67468.peg.2723 CDS gi|344045780|gb|AFYA01000004.1| 260100 261614 3 + 1515 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67468.peg.2724 CDS gi|344045780|gb|AFYA01000004.1| 261614 262537 2 + 924 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67468.peg.2725 CDS gi|344045780|gb|AFYA01000004.1| 262566 263717 3 + 1152 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67468.peg.2726 CDS gi|344045780|gb|AFYA01000004.1| 264056 263754 -2 - 303 hypothetical protein - none -
fig|6666666.67468.peg.2727 CDS gi|344045780|gb|AFYA01000004.1| 265136 264066 -2 - 1071 (R)-2-hydroxyacid dehydrogenase, similar to L-sulfolactate dehydrogenase (EC 1.1.1.272) Glyoxylate bypass
fig|6666666.67468.peg.2728 CDS gi|344045780|gb|AFYA01000004.1| 265935 265207 -3 - 729 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.2729 CDS gi|344045780|gb|AFYA01000004.1| 266056 267456 1 + 1401 CitH citrate transporter Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67468.peg.2730 CDS gi|344045780|gb|AFYA01000004.1| 267481 268845 1 + 1365 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67468.peg.2731 CDS gi|344045780|gb|AFYA01000004.1| 268850 269479 2 + 630 possible WhiE protein - none -
fig|6666666.67468.peg.2732 CDS gi|344045780|gb|AFYA01000004.1| 270286 269582 -1 - 705 FIG00547148: hypothetical protein - none -
fig|6666666.67468.peg.2733 CDS gi|344045780|gb|AFYA01000004.1| 272582 270366 -2 - 2217 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.67468.peg.2734 CDS gi|344045780|gb|AFYA01000004.1| 273564 272668 -3 - 897 FIG00544109: hypothetical protein - none -
fig|6666666.67468.peg.2735 CDS gi|344045780|gb|AFYA01000004.1| 274383 273574 -3 - 810 putative iron transporter ATP-binding protein - none -
fig|6666666.67468.peg.2736 CDS gi|344045780|gb|AFYA01000004.1| 275408 274380 -2 - 1029 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.2737 CDS gi|344045780|gb|AFYA01000004.1| 276400 275405 -1 - 996 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67468.peg.2738 CDS gi|344045780|gb|AFYA01000004.1| 277465 276410 -1 - 1056 Iron compound ABC uptake transporter substrate-binding protein PiaA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67468.peg.2739 CDS gi|344045780|gb|AFYA01000004.1| 277649 278923 2 + 1275 putative transport protein - none -
fig|6666666.67468.peg.2740 CDS gi|344045780|gb|AFYA01000004.1| 278975 279889 2 + 915 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67468.peg.2741 CDS gi|344045780|gb|AFYA01000004.1| 279891 280550 3 + 660 FIG00544233: hypothetical protein - none -
fig|6666666.67468.peg.2742 CDS gi|344045780|gb|AFYA01000004.1| 280687 280878 1 + 192 FIG00544199: hypothetical protein - none -
fig|6666666.67468.peg.2743 CDS gi|344046045|gb|AFYA01000003.1| 723 2087 3 + 1365 FIG00546540: hypothetical protein - none -
fig|6666666.67468.peg.2744 CDS gi|344046045|gb|AFYA01000003.1| 2220 2095 -3 - 126 FIG00546571: hypothetical protein - none -
fig|6666666.67468.peg.2745 CDS gi|344046045|gb|AFYA01000003.1| 2438 2887 2 + 450 Mobile element protein - none -
fig|6666666.67468.peg.2746 CDS gi|344046045|gb|AFYA01000003.1| 3399 3100 -3 - 300 RESOLVASE FAMILY RECOMBINASE - none -
fig|6666666.67468.peg.2747 CDS gi|344046049|gb|AFYA01000002.1| 465 986 3 + 522 hypothetical protein - none -
fig|6666666.67468.peg.2748 CDS gi|344046049|gb|AFYA01000002.1| 955 1524 1 + 570 PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR - none -
fig|6666666.67468.peg.2749 CDS gi|344046049|gb|AFYA01000002.1| 1608 2132 3 + 525 FIG00545742: hypothetical protein - none -
fig|6666666.67468.peg.2750 CDS gi|344046049|gb|AFYA01000002.1| 2249 2722 2 + 474 FIG00546547: hypothetical protein - none -
fig|6666666.67468.peg.2751 CDS gi|344046049|gb|AFYA01000002.1| 2723 2938 2 + 216 Transcriptional regulator, Cro/CI family - none -
fig|6666666.67468.peg.2752 CDS gi|344046049|gb|AFYA01000002.1| 4500 3010 -3 - 1491 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67468.peg.2753 CDS gi|344046049|gb|AFYA01000002.1| 4566 5696 3 + 1131 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67468.peg.2754 CDS gi|344046049|gb|AFYA01000002.1| 6795 6190 -3 - 606 FIG00547055: hypothetical protein - none -
fig|6666666.67468.peg.2755 CDS gi|344046049|gb|AFYA01000002.1| 7603 6797 -1 - 807 Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67468.peg.2756 CDS gi|344046049|gb|AFYA01000002.1| 8305 7649 -1 - 657 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67468.peg.2757 CDS gi|344046049|gb|AFYA01000002.1| 10173 8305 -3 - 1869 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67468.peg.2758 CDS gi|344046049|gb|AFYA01000002.1| 10261 11325 1 + 1065 PUTATIVE ALIPHATIC SULFONATES UPTAKE ABC TRANSPORTER SECRETED SOLUTE-BINDING PROTEIN - none -
fig|6666666.67468.peg.2759 CDS gi|344046049|gb|AFYA01000002.1| 12372 11350 -3 - 1023 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67468.peg.2760 CDS gi|344046049|gb|AFYA01000002.1| 13276 12407 -1 - 870 FIG00548182: hypothetical protein - none -
fig|6666666.67468.peg.2761 CDS gi|344046049|gb|AFYA01000002.1| 15006 13414 -3 - 1593 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67468.peg.2762 CDS gi|344046049|gb|AFYA01000002.1| 15031 15210 1 + 180 FIG00549247: hypothetical protein - none -
fig|6666666.67468.peg.2763 CDS gi|344046049|gb|AFYA01000002.1| 17527 15782 -1 - 1746 FIG00544526: hypothetical protein - none -
fig|6666666.67468.peg.2764 CDS gi|344046049|gb|AFYA01000002.1| 19403 17586 -2 - 1818 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.67468.peg.2765 CDS gi|344046049|gb|AFYA01000002.1| 20375 19419 -2 - 957 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67468.peg.2766 CDS gi|344046049|gb|AFYA01000002.1| 20926 20438 -1 - 489 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) Aromatic Amin Catabolism
fig|6666666.67468.peg.2767 CDS gi|344046049|gb|AFYA01000002.1| 21398 21168 -2 - 231 FIG00544449: hypothetical protein - none -
fig|6666666.67468.peg.2768 CDS gi|344046049|gb|AFYA01000002.1| 21829 21395 -1 - 435 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67468.peg.2769 CDS gi|344046049|gb|AFYA01000002.1| 22277 23287 2 + 1011 putative cyanate ABC transporter, substrate binding protein - none -
fig|6666666.67468.peg.2770 CDS gi|344046049|gb|AFYA01000002.1| 23345 24127 2 + 783 Nitrate ABC transporter, permease protein Nitrate and nitrite ammonification
fig|6666666.67468.peg.2771 CDS gi|344046049|gb|AFYA01000002.1| 24120 24389 3 + 270 bicarbonate transport system ATP-binding protein - none -
fig|6666666.67468.peg.2772 CDS gi|344046049|gb|AFYA01000002.1| 24390 24653 3 + 264 putative nitrate transport ATP-binding protein( EC:3.6.3.25 ) - none -
fig|6666666.67468.peg.2773 CDS gi|344046049|gb|AFYA01000002.1| 24693 24824 3 + 132 putative nitrate transport ATP-binding protein( EC:3.6.3.25 ) - none -
fig|6666666.67468.peg.2774 CDS gi|344046049|gb|AFYA01000002.1| 25035 24907 -3 - 129 hypothetical protein - none -
fig|6666666.67468.peg.2775 CDS gi|344046049|gb|AFYA01000002.1| 26122 25106 -1 - 1017 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67468.peg.2776 CDS gi|344046049|gb|AFYA01000002.1| 26820 26302 -3 - 519 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67468.peg.2777 CDS gi|344046049|gb|AFYA01000002.1| 28714 26834 -1 - 1881 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67468.peg.2778 CDS gi|344046049|gb|AFYA01000002.1| 29152 30753 1 + 1602 FIG00544780: hypothetical protein - none -
fig|6666666.67468.peg.2779 CDS gi|344046049|gb|AFYA01000002.1| 30801 31436 3 + 636 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67468.peg.2780 CDS gi|344046049|gb|AFYA01000002.1| 31565 33406 2 + 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67468.peg.2781 CDS gi|344046085|gb|AFYA01000001.1| 3266 159 -2 - 3108 Conserved putative integral membrane protein - none -
fig|6666666.67468.peg.2782 CDS gi|344046085|gb|AFYA01000001.1| 3447 3244 -3 - 204 FIG00543976: hypothetical protein - none -
fig|6666666.67468.peg.2783 CDS gi|344046085|gb|AFYA01000001.1| 3956 3510 -2 - 447 FIG00545938: hypothetical protein - none -
fig|6666666.67468.peg.2784 CDS gi|344046085|gb|AFYA01000001.1| 4060 5205 1 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.67468.peg.2785 CDS gi|344046085|gb|AFYA01000001.1| 5269 6960 1 + 1692 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67468.peg.2786 CDS gi|344046085|gb|AFYA01000001.1| 7778 7005 -2 - 774 FIG00545676: hypothetical protein - none -
fig|6666666.67468.peg.2787 CDS gi|344046085|gb|AFYA01000001.1| 8548 9117 1 + 570 Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming) pyrimidine conversions
fig|6666666.67468.peg.2788 CDS gi|344046085|gb|AFYA01000001.1| 9203 10522 2 + 1320 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67468.peg.2789 CDS gi|344046085|gb|AFYA01000001.1| 11778 10519 -3 - 1260 FIG00549506: hypothetical protein - none -
fig|6666666.67468.peg.2790 CDS gi|344046085|gb|AFYA01000001.1| 12172 12312 1 + 141 hypothetical protein - none -
fig|6666666.67468.peg.2791 CDS gi|344046085|gb|AFYA01000001.1| 13651 12338 -1 - 1314 Alanine transaminase (EC 2.6.1.2) ## AlaA - none -
fig|6666666.67468.peg.2792 CDS gi|344046085|gb|AFYA01000001.1| 14543 13749 -2 - 795 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67468.peg.2793 CDS gi|344046085|gb|AFYA01000001.1| 15568 14546 -1 - 1023 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.2794 CDS gi|344046085|gb|AFYA01000001.1| 16545 15565 -3 - 981 hypothetical protein - none -
fig|6666666.67468.peg.2795 CDS gi|344046085|gb|AFYA01000001.1| 17646 16621 -3 - 1026 Ferrienterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) - none -
fig|6666666.67468.peg.2796 CDS gi|344046085|gb|AFYA01000001.1| 17967 19823 3 + 1857 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.67468.peg.2797 CDS gi|344046085|gb|AFYA01000001.1| 19884 21293 3 + 1410 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism
fig|6666666.67468.peg.2798 CDS gi|344046085|gb|AFYA01000001.1| 21309 22202 3 + 894 Beta-glucoside bgl operon antiterminator, BglG family Beta-Glucoside Metabolism
fig|6666666.67468.peg.2799 CDS gi|344046085|gb|AFYA01000001.1| 22815 22189 -3 - 627 conserved hypothetical protein, putative F420-dependent NADP reductase - none -
fig|6666666.67468.peg.2800 CDS gi|344046085|gb|AFYA01000001.1| 23522 22917 -2 - 606 FIG00548305: hypothetical protein - none -
fig|6666666.67468.peg.2801 CDS gi|344046085|gb|AFYA01000001.1| 23784 24944 3 + 1161 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.67468.peg.2802 CDS gi|344046085|gb|AFYA01000001.1| 25531 24941 -1 - 591 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67468.peg.2803 CDS gi|344046085|gb|AFYA01000001.1| 25722 25528 -3 - 195 FIG00545448: hypothetical protein - none -
fig|6666666.67468.peg.2804 CDS gi|344046085|gb|AFYA01000001.1| 26704 25727 -1 - 978 Membrane protease family protein BA0301 - none -
fig|6666666.67468.peg.2805 CDS gi|344046085|gb|AFYA01000001.1| 27183 28088 3 + 906 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.2806 CDS gi|344046085|gb|AFYA01000001.1| 28098 28973 3 + 876 FIG00547620: hypothetical protein - none -
fig|6666666.67468.peg.2807 CDS gi|344046085|gb|AFYA01000001.1| 29172 29050 -3 - 123 hypothetical protein - none -
fig|6666666.67468.peg.2808 CDS gi|344046085|gb|AFYA01000001.1| 29126 29878 2 + 753 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67468.peg.2809 CDS gi|344046085|gb|AFYA01000001.1| 29881 30525 1 + 645 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.67468.peg.2810 CDS gi|344046085|gb|AFYA01000001.1| 30516 31544 3 + 1029 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.67468.peg.2811 CDS gi|344046085|gb|AFYA01000001.1| 32691 31861 -3 - 831 FIG00546798: hypothetical protein - none -
fig|6666666.67468.peg.2812 CDS gi|344046085|gb|AFYA01000001.1| 33077 33586 2 + 510 hypothetical protein - none -
fig|6666666.67468.peg.2813 CDS gi|344046085|gb|AFYA01000001.1| 33854 35179 2 + 1326 putative peptidase - none -
fig|6666666.67468.peg.2814 CDS gi|344046085|gb|AFYA01000001.1| 36387 35176 -3 - 1212 FIG00547887: hypothetical protein - none -
fig|6666666.67468.peg.2815 CDS gi|344046085|gb|AFYA01000001.1| 36453 37169 3 + 717 ABC-type transporter, ATPase component - none -
fig|6666666.67468.peg.2816 CDS gi|344046085|gb|AFYA01000001.1| 37166 37900 2 + 735 FIG00546443: hypothetical protein - none -
fig|6666666.67468.peg.2817 CDS gi|344046085|gb|AFYA01000001.1| 38193 39197 3 + 1005 Tricarboxylate transport protein TctC Tricarboxylate transport cassette;
Tricarboxylate transport system
fig|6666666.67468.peg.2818 CDS gi|344046085|gb|AFYA01000001.1| 39197 39763 2 + 567 Tricarboxylate transport protein TctB Tricarboxylate transport cassette;
Tricarboxylate transport system
fig|6666666.67468.peg.2819 CDS gi|344046085|gb|AFYA01000001.1| 39763 41295 1 + 1533 Tricarboxylate transport membrane protein TctA Tricarboxylate transport cassette;
Tricarboxylate transport system
fig|6666666.67468.peg.2820 CDS gi|344046085|gb|AFYA01000001.1| 41533 41372 -1 - 162 FIG00547184: hypothetical protein - none -
fig|6666666.67468.peg.2821 CDS gi|344046085|gb|AFYA01000001.1| 41841 42257 3 + 417 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein Alkylphosphonate utilization
fig|6666666.67468.peg.2822 CDS gi|344046085|gb|AFYA01000001.1| 42369 42575 3 + 207 hypothetical membrane protein - none -
fig|6666666.67468.peg.2823 CDS gi|344046085|gb|AFYA01000001.1| 43984 42611 -1 - 1374 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.67468.peg.2824 CDS gi|344046085|gb|AFYA01000001.1| 44367 46052 3 + 1686 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.67468.peg.2825 CDS gi|344046085|gb|AFYA01000001.1| 46294 47079 1 + 786 Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Inorganic Sulfur Assimilation
fig|6666666.67468.peg.2826 CDS gi|344046085|gb|AFYA01000001.1| 47061 47990 3 + 930 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67468.peg.2827 CDS gi|344046085|gb|AFYA01000001.1| 47990 49291 2 + 1302 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67468.peg.2828 CDS gi|344046085|gb|AFYA01000001.1| 49329 50054 3 + 726 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) - none -
fig|6666666.67468.peg.2829 CDS gi|344046085|gb|AFYA01000001.1| 50075 51004 2 + 930 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67468.peg.2830 CDS gi|344046085|gb|AFYA01000001.1| 51722 54430 2 + 2709 hypothetical protein - none -
fig|6666666.67468.peg.2831 CDS gi|344046085|gb|AFYA01000001.1| 54802 54500 -1 - 303 hypothetical protein - none -
fig|6666666.67468.peg.2832 CDS gi|344046085|gb|AFYA01000001.1| 55164 54919 -3 - 246 hypothetical protein - none -
fig|6666666.67468.peg.2833 CDS gi|344046085|gb|AFYA01000001.1| 57160 56282 -1 - 879 Mrr restriction system protein - none -
fig|6666666.67468.peg.2834 CDS gi|344046085|gb|AFYA01000001.1| 57675 58712 3 + 1038 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.2835 CDS gi|344046085|gb|AFYA01000001.1| 59044 59589 1 + 546 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.67468.peg.2836 CDS gi|344046085|gb|AFYA01000001.1| 59590 59736 1 + 147 hypothetical protein - none -
fig|6666666.67468.peg.2837 CDS gi|344046085|gb|AFYA01000001.1| 59776 59889 1 + 114 hypothetical protein - none -
fig|6666666.67468.peg.2838 CDS gi|344046085|gb|AFYA01000001.1| 59850 60302 3 + 453 FIG005429: hypothetical protein - none -
fig|6666666.67468.peg.2839 CDS gi|344046085|gb|AFYA01000001.1| 60673 61233 1 + 561 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.67468.peg.2840 CDS gi|344046085|gb|AFYA01000001.1| 62708 61278 -2 - 1431 FIG00544912: hypothetical protein - none -
fig|6666666.67468.peg.2841 CDS gi|344046085|gb|AFYA01000001.1| 63048 64904 3 + 1857 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67468.peg.2842 CDS gi|344046085|gb|AFYA01000001.1| 64905 65561 3 + 657 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67468.peg.2843 CDS gi|344046085|gb|AFYA01000001.1| 65766 66953 3 + 1188 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67468.peg.2844 CDS gi|344046085|gb|AFYA01000001.1| 66985 67425 1 + 441 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67468.peg.2845 CDS gi|344046085|gb|AFYA01000001.1| 67747 69267 1 + 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.2846 CDS gi|344046085|gb|AFYA01000001.1| 70463 69327 -2 - 1137 FIG00544569: hypothetical protein - none -
fig|6666666.67468.peg.2847 CDS gi|344046085|gb|AFYA01000001.1| 70579 70463 -1 - 117 hypothetical protein - none -
fig|6666666.67468.peg.2848 CDS gi|344046085|gb|AFYA01000001.1| 70589 70702 2 + 114 hypothetical protein - none -
fig|6666666.67468.peg.2849 CDS gi|344046085|gb|AFYA01000001.1| 70843 71601 1 + 759 FIG00545709: hypothetical protein - none -
fig|6666666.67468.peg.2850 CDS gi|344046085|gb|AFYA01000001.1| 72802 71645 -1 - 1158 hypothetical protein - none -
fig|6666666.67468.peg.2851 CDS gi|344046085|gb|AFYA01000001.1| 72958 72839 -1 - 120 hypothetical protein - none -
fig|6666666.67468.peg.2852 CDS gi|344046085|gb|AFYA01000001.1| 73299 72964 -3 - 336 rifampin ADP-ribosyl transferase - none -
fig|6666666.67468.peg.2853 CDS gi|344046085|gb|AFYA01000001.1| 73892 73407 -2 - 486 Histone acetyltransferase HPA2 and related acetyltransferases - none -
fig|6666666.67468.peg.2854 CDS gi|344046085|gb|AFYA01000001.1| 74913 73993 -3 - 921 Mobile element protein - none -
fig|6666666.67468.peg.2855 CDS gi|344046085|gb|AFYA01000001.1| 75035 76105 2 + 1071 conserved hypothetical protein - none -
fig|6666666.67468.peg.2856 CDS gi|344046085|gb|AFYA01000001.1| 77408 76365 -2 - 1044 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.67468.peg.2857 CDS gi|344046085|gb|AFYA01000001.1| 78606 77419 -3 - 1188 FIG00547297: hypothetical protein - none -
fig|6666666.67468.peg.2858 CDS gi|344046085|gb|AFYA01000001.1| 79229 80578 2 + 1350 FIG00549883: hypothetical protein - none -
fig|6666666.67468.peg.2859 CDS gi|344046085|gb|AFYA01000001.1| 80872 83430 1 + 2559 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67468.peg.2860 CDS gi|344046085|gb|AFYA01000001.1| 83437 83838 1 + 402 FIG00544891: hypothetical protein - none -
fig|6666666.67468.peg.2861 CDS gi|344046085|gb|AFYA01000001.1| 85225 83846 -1 - 1380 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog - none -
fig|6666666.67468.peg.2862 CDS gi|344046085|gb|AFYA01000001.1| 85380 86102 3 + 723 FIG00545075: hypothetical protein - none -
fig|6666666.67468.peg.2863 CDS gi|344046085|gb|AFYA01000001.1| 86226 87050 3 + 825 Rhodanese-related sulfurtransferase - none -
fig|6666666.67468.peg.2864 CDS gi|344046085|gb|AFYA01000001.1| 87094 88470 1 + 1377 FIG00544840: hypothetical protein - none -
fig|6666666.67468.peg.2865 CDS gi|344046085|gb|AFYA01000001.1| 88570 89124 1 + 555 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67468.peg.2866 CDS gi|344046085|gb|AFYA01000001.1| 89159 89779 2 + 621 probable RNA methyltransferase - none -
fig|6666666.67468.peg.2867 CDS gi|344046085|gb|AFYA01000001.1| 89869 90015 1 + 147 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67468.peg.2868 CDS gi|344046085|gb|AFYA01000001.1| 90052 91086 1 + 1035 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67468.peg.2869 CDS gi|344046085|gb|AFYA01000001.1| 91334 92368 2 + 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67468.peg.2870 CDS gi|344046085|gb|AFYA01000001.1| 92465 93634 2 + 1170 FIG00545517: hypothetical protein - none -
fig|6666666.67468.peg.2871 CDS gi|344046085|gb|AFYA01000001.1| 93897 93631 -3 - 267 hypothetical membrane protein - none -
fig|6666666.67468.peg.2872 CDS gi|344046085|gb|AFYA01000001.1| 94763 93912 -2 - 852 FIG00545467: hypothetical protein - none -
fig|6666666.67468.peg.2873 CDS gi|344046085|gb|AFYA01000001.1| 94883 96172 2 + 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67468.peg.2874 CDS gi|344046085|gb|AFYA01000001.1| 96300 97571 3 + 1272 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67468.peg.2875 CDS gi|344046085|gb|AFYA01000001.1| 97573 97974 1 + 402 hypothetical membrane protein - none -
fig|6666666.67468.peg.2876 CDS gi|344046085|gb|AFYA01000001.1| 98080 99111 1 + 1032 FIG00545840: hypothetical protein - none -
fig|6666666.67468.peg.2877 CDS gi|344046085|gb|AFYA01000001.1| 99126 100136 3 + 1011 FIG00543833: hypothetical protein - none -
fig|6666666.67468.peg.2878 CDS gi|344046085|gb|AFYA01000001.1| 100673 100125 -2 - 549 FIG00544625: hypothetical protein - none -
fig|6666666.67468.peg.2879 CDS gi|344046085|gb|AFYA01000001.1| 102177 100810 -3 - 1368 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.67468.peg.2880 CDS gi|344046085|gb|AFYA01000001.1| 102689 104074 2 + 1386 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.2881 CDS gi|344046085|gb|AFYA01000001.1| 104074 105267 1 + 1194 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.2882 CDS gi|344046085|gb|AFYA01000001.1| 108213 105748 -3 - 2466 serine/threonine protein kinase - none -
fig|6666666.67468.peg.2883 CDS gi|344046085|gb|AFYA01000001.1| 109237 108203 -1 - 1035 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67468.peg.2884 CDS gi|344046085|gb|AFYA01000001.1| 110731 109238 -1 - 1494 FIG00543876: hypothetical protein - none -
fig|6666666.67468.peg.2885 CDS gi|344046085|gb|AFYA01000001.1| 110809 111312 1 + 504 mutT3 - none -
fig|6666666.67468.peg.2886 CDS gi|344046085|gb|AFYA01000001.1| 111328 112266 1 + 939 putative ABC transporter ATP-binding protein - none -
fig|6666666.67468.peg.2887 CDS gi|344046085|gb|AFYA01000001.1| 112259 113017 2 + 759 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67468.peg.2888 CDS gi|344046085|gb|AFYA01000001.1| 113079 113861 3 + 783 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.67468.peg.2889 CDS gi|344046085|gb|AFYA01000001.1| 115180 113858 -1 - 1323 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.67468.peg.2890 CDS gi|344046085|gb|AFYA01000001.1| 115417 116613 1 + 1197 permeases of the major facilitator superfamily - none -
fig|6666666.67468.peg.2891 CDS gi|344046085|gb|AFYA01000001.1| 118448 116946 -2 - 1503 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67468.peg.2892 CDS gi|344046085|gb|AFYA01000001.1| 119246 118455 -2 - 792 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67468.peg.2893 CDS gi|344046085|gb|AFYA01000001.1| 120280 119273 -1 - 1008 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67468.peg.2894 CDS gi|344046085|gb|AFYA01000001.1| 120851 120270 -2 - 582 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67468.peg.2895 CDS gi|344046085|gb|AFYA01000001.1| 120867 121079 3 + 213 FIG00544061: hypothetical protein - none -
fig|6666666.67468.peg.2896 CDS gi|344046085|gb|AFYA01000001.1| 121085 121750 2 + 666 FIG00544658: hypothetical protein - none -
fig|6666666.67468.peg.2897 CDS gi|344046085|gb|AFYA01000001.1| 121819 122949 1 + 1131 Carboxylate-amine ligase - none -
fig|6666666.67468.peg.2898 CDS gi|344046085|gb|AFYA01000001.1| 122956 123555 1 + 600 FIG00545234: hypothetical protein - none -
fig|6666666.67468.peg.2899 CDS gi|344046085|gb|AFYA01000001.1| 124371 123991 -3 - 381 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67468.peg.2900 CDS gi|344046085|gb|AFYA01000001.1| 124647 124372 -3 - 276 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67468.peg.2901 CDS gi|344046085|gb|AFYA01000001.1| 125160 124651 -3 - 510 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67468.peg.2902 CDS gi|344046085|gb|AFYA01000001.1| 126857 125157 -2 - 1701 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67468.peg.2903 CDS gi|344046085|gb|AFYA01000001.1| 127341 126850 -3 - 492 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67468.peg.2904 CDS gi|344046085|gb|AFYA01000001.1| 130404 127345 -3 - 3060 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67468.peg.2905 CDS gi|344046085|gb|AFYA01000001.1| 131345 130785 -2 - 561 Acetyl-CoA acetyltransferase - none -
fig|6666666.67468.peg.2906 CDS gi|344046085|gb|AFYA01000001.1| 133062 131689 -3 - 1374 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67468.peg.2907 CDS gi|344046085|gb|AFYA01000001.1| 133556 133305 -2 - 252 hypothetical protein - none -
fig|6666666.67468.peg.2908 CDS gi|344046085|gb|AFYA01000001.1| 133702 133941 1 + 240 FIG00548242: hypothetical protein - none -
fig|6666666.67468.peg.2909 CDS gi|344046085|gb|AFYA01000001.1| 133935 136616 3 + 2682 FIG00544348: hypothetical protein - none -
fig|6666666.67468.peg.2910 CDS gi|344046085|gb|AFYA01000001.1| 136657 140250 1 + 3594 FIG00545953: hypothetical protein - none -
fig|6666666.67468.peg.2911 CDS gi|344046085|gb|AFYA01000001.1| 140251 143052 1 + 2802 FIG00546741: hypothetical protein - none -
fig|6666666.67468.peg.2912 CDS gi|344046085|gb|AFYA01000001.1| 143052 145505 3 + 2454 FIG01262165: hypothetical protein - none -
fig|6666666.67468.peg.2913 CDS gi|344046085|gb|AFYA01000001.1| 145513 147477 1 + 1965 FIG00549493: hypothetical protein - none -
fig|6666666.67468.peg.2914 CDS gi|344046085|gb|AFYA01000001.1| 147474 148439 3 + 966 hypothetical protein - none -
fig|6666666.67468.peg.2915 CDS gi|344046085|gb|AFYA01000001.1| 148436 149647 2 + 1212 FIG00546445: hypothetical protein - none -
fig|6666666.67468.peg.2916 CDS gi|344046085|gb|AFYA01000001.1| 149644 149826 1 + 183 hypothetical protein - none -
fig|6666666.67468.peg.2917 CDS gi|344046085|gb|AFYA01000001.1| 150034 151680 1 + 1647 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67468.peg.2918 CDS gi|344046085|gb|AFYA01000001.1| 152239 152412 1 + 174 FIG00547411: hypothetical protein - none -
fig|6666666.67468.peg.2919 CDS gi|344046085|gb|AFYA01000001.1| 152499 152636 3 + 138 hypothetical protein - none -
fig|6666666.67468.peg.2920 CDS gi|344046085|gb|AFYA01000001.1| 152744 153664 2 + 921 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67468.peg.2921 CDS gi|344046085|gb|AFYA01000001.1| 153861 154031 3 + 171 FIG00545576: hypothetical protein - none -
fig|6666666.67468.peg.2922 CDS gi|344046085|gb|AFYA01000001.1| 154079 155644 2 + 1566 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.2923 CDS gi|344046085|gb|AFYA01000001.1| 159577 155690 -1 - 3888 putative non-ribosomal peptide synthetase - none -
fig|6666666.67468.peg.2924 CDS gi|344046085|gb|AFYA01000001.1| 160031 159585 -2 - 447 Transcriptional regulator, MarR family - none -
fig|6666666.67468.peg.2925 CDS gi|344046085|gb|AFYA01000001.1| 160617 160327 -3 - 291 rhodanese-related sulfurtransferase - none -
fig|6666666.67468.peg.2926 CDS gi|344046085|gb|AFYA01000001.1| 160872 162107 3 + 1236 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.67468.peg.2927 CDS gi|344046085|gb|AFYA01000001.1| 162410 164422 2 + 2013 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.67468.peg.2928 CDS gi|344046085|gb|AFYA01000001.1| 164516 165934 2 + 1419 Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) Beta-Glucoside Metabolism;
Beta-Glucoside Metabolism
fig|6666666.67468.peg.2929 CDS gi|344046085|gb|AFYA01000001.1| 165950 166831 2 + 882 Beta-glucoside bgl operon antiterminator, BglG family Beta-Glucoside Metabolism
fig|6666666.67468.peg.2930 CDS gi|344046085|gb|AFYA01000001.1| 166896 167507 3 + 612 Possible membrane protein - none -
fig|6666666.67468.peg.2931 CDS gi|344046085|gb|AFYA01000001.1| 167504 168004 2 + 501 FIG00547633: hypothetical protein - none -
fig|6666666.67468.peg.2932 CDS gi|344046085|gb|AFYA01000001.1| 168001 168414 1 + 414 FIG00544957: hypothetical protein - none -
fig|6666666.67468.peg.2933 CDS gi|344046085|gb|AFYA01000001.1| 168425 168850 2 + 426 Putative ESX-1 secretion system component Rv3877 - none -
fig|6666666.67468.peg.2934 CDS gi|344046085|gb|AFYA01000001.1| 168838 170379 1 + 1542 Spermidine synthase (EC 2.5.1.16) Polyamine Metabolism
fig|6666666.67468.peg.2935 CDS gi|344046085|gb|AFYA01000001.1| 171356 170880 -2 - 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67468.peg.2936 CDS gi|344046085|gb|AFYA01000001.1| 171557 172840 2 + 1284 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67468.peg.2937 CDS gi|344046085|gb|AFYA01000001.1| 172842 173786 3 + 945 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67468.peg.2938 CDS gi|344046085|gb|AFYA01000001.1| 173820 174422 3 + 603 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67468.peg.2939 CDS gi|344046085|gb|AFYA01000001.1| 174555 177116 3 + 2562 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67468.peg.2940 CDS gi|344046085|gb|AFYA01000001.1| 177094 177699 1 + 606 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
Zinc regulated enzymes
fig|6666666.67468.peg.2941 CDS gi|344046085|gb|AFYA01000001.1| 177742 178554 1 + 813 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67468.peg.2942 CDS gi|344046085|gb|AFYA01000001.1| 178547 178939 2 + 393 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67468.peg.2943 CDS gi|344046085|gb|AFYA01000001.1| 178939 179418 1 + 480 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67468.peg.2944 CDS gi|344046085|gb|AFYA01000001.1| 179434 179901 1 + 468 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67468.peg.2945 CDS gi|344046085|gb|AFYA01000001.1| 179912 180661 2 + 750 FIG00544686: hypothetical protein - none -
fig|6666666.67468.peg.2946 CDS gi|344046085|gb|AFYA01000001.1| 180661 181356 1 + 696 FIG173306: hypothetical protein - none -
fig|6666666.67468.peg.2947 CDS gi|344046085|gb|AFYA01000001.1| 181353 182153 3 + 801 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67468.peg.2948 CDS gi|344046085|gb|AFYA01000001.1| 182200 183780 1 + 1581 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67468.peg.2949 CDS gi|344046085|gb|AFYA01000001.1| 184228 185673 1 + 1446 putative transport protein - none -
fig|6666666.67468.peg.2950 CDS gi|344046085|gb|AFYA01000001.1| 187488 185764 -3 - 1725 hypothetical protein - none -
fig|6666666.67468.peg.2951 CDS gi|344046085|gb|AFYA01000001.1| 187487 187603 2 + 117 hypothetical protein - none -
fig|6666666.67468.peg.2952 CDS gi|344046085|gb|AFYA01000001.1| 189799 188081 -1 - 1719 hypothetical protein - none -
fig|6666666.67468.peg.2953 CDS gi|344046085|gb|AFYA01000001.1| 189819 189938 3 + 120 hypothetical protein - none -
fig|6666666.67468.peg.2954 CDS gi|344046085|gb|AFYA01000001.1| 191881 189998 -1 - 1884 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - none -
fig|6666666.67468.peg.2955 CDS gi|344046085|gb|AFYA01000001.1| 192966 192034 -3 - 933 putative transcription regulator - none -
fig|6666666.67468.peg.2956 CDS gi|344046085|gb|AFYA01000001.1| 194587 193154 -1 - 1434 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67468.peg.2957 CDS gi|344046085|gb|AFYA01000001.1| 194855 197632 2 + 2778 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67468.peg.2958 CDS gi|344046085|gb|AFYA01000001.1| 198281 198406 2 + 126 hypothetical protein - none -
fig|6666666.67468.peg.2959 CDS gi|344046085|gb|AFYA01000001.1| 198541 198693 1 + 153 hypothetical protein - none -
fig|6666666.67468.peg.2960 CDS gi|344046085|gb|AFYA01000001.1| 199466 199320 -2 - 147 hypothetical protein - none -
fig|6666666.67468.peg.2961 CDS gi|344046085|gb|AFYA01000001.1| 200544 199768 -3 - 777 2,3-butanediol dehydrogenase, S-alcohol forming, (S)-acetoin-specific (EC 1.1.1.76) Acetoin, butanediol metabolism
fig|6666666.67468.peg.2962 CDS gi|344046085|gb|AFYA01000001.1| 200679 200864 3 + 186 FIG00543978: hypothetical protein - none -
fig|6666666.67468.peg.2963 CDS gi|344046085|gb|AFYA01000001.1| 202047 200890 -3 - 1158 FIG00545704: hypothetical protein - none -
fig|6666666.67468.peg.2964 CDS gi|344046085|gb|AFYA01000001.1| 202966 202085 -1 - 882 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67468.peg.2965 CDS gi|344046085|gb|AFYA01000001.1| 203033 203656 2 + 624 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.67468.peg.2966 CDS gi|344046085|gb|AFYA01000001.1| 204023 205477 2 + 1455 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.2967 CDS gi|344046085|gb|AFYA01000001.1| 205553 206242 2 + 690 FIG01278852: hypothetical protein - none -
fig|6666666.67468.peg.2968 CDS gi|344046085|gb|AFYA01000001.1| 207334 206234 -1 - 1101 DNA integrity scanning protein disA - none -
fig|6666666.67468.peg.2969 CDS gi|344046085|gb|AFYA01000001.1| 208732 207338 -1 - 1395 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67468.peg.2970 CDS gi|344046085|gb|AFYA01000001.1| 209437 208853 -1 - 585 FIG00544037: hypothetical protein - none -
fig|6666666.67468.peg.2971 CDS gi|344046085|gb|AFYA01000001.1| 210744 209626 -3 - 1119 two-component system, sensory transduction histidine kinase - none -
fig|6666666.67468.peg.2972 CDS gi|344046085|gb|AFYA01000001.1| 211466 210741 -2 - 726 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67468.peg.2973 CDS gi|344046085|gb|AFYA01000001.1| 211774 212370 1 + 597 CarD-like transcriptional regulator - none -
fig|6666666.67468.peg.2974 CDS gi|344046085|gb|AFYA01000001.1| 212377 213147 1 + 771 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67468.peg.2975 CDS gi|344046085|gb|AFYA01000001.1| 213140 213622 2 + 483 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67468.peg.2976 CDS gi|344046085|gb|AFYA01000001.1| 214457 214116 -2 - 342 Transcriptional regulator, AsnC family - none -
fig|6666666.67468.peg.2977 CDS gi|344046085|gb|AFYA01000001.1| 214940 215311 2 + 372 putative threonine efflux protein - none -
fig|6666666.67468.peg.2978 CDS gi|344046085|gb|AFYA01000001.1| 216182 215364 -2 - 819 ABC-type transporter, ATPase component - none -
fig|6666666.67468.peg.2979 CDS gi|344046085|gb|AFYA01000001.1| 218182 216179 -1 - 2004 FIG00544816: hypothetical protein - none -
fig|6666666.67468.peg.2980 CDS gi|344046085|gb|AFYA01000001.1| 219148 218183 -1 - 966 ABC-type transporter, permease component - none -
fig|6666666.67468.peg.2981 CDS gi|344046085|gb|AFYA01000001.1| 220939 219329 -1 - 1611 Putative transport system secreted protein - none -
fig|6666666.67468.peg.2982 CDS gi|344046085|gb|AFYA01000001.1| 221247 221969 3 + 723 Transcriptional regulator, GntR family - none -
fig|6666666.67468.peg.2983 CDS gi|344046085|gb|AFYA01000001.1| 221959 223176 1 + 1218 FIG00548186: hypothetical protein - none -
fig|6666666.67468.peg.2984 CDS gi|344046085|gb|AFYA01000001.1| 224160 223462 -3 - 699 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.67468.peg.2985 CDS gi|344046085|gb|AFYA01000001.1| 225114 224203 -3 - 912 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.67468.peg.2986 CDS gi|344046085|gb|AFYA01000001.1| 226065 225127 -3 - 939 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67468.peg.2987 CDS gi|344046085|gb|AFYA01000001.1| 226280 227446 2 + 1167 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67468.peg.2988 CDS gi|344046085|gb|AFYA01000001.1| 227487 228248 3 + 762 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67468.peg.2989 CDS gi|344046085|gb|AFYA01000001.1| 228317 229567 2 + 1251 Sucrose-6-phosphate hydrolase (EC 3.2.1.26) - none -
fig|6666666.67468.peg.2990 CDS gi|344046085|gb|AFYA01000001.1| 229718 231703 2 + 1986 PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.67468.peg.2991 CDS gi|344046085|gb|AFYA01000001.1| 231746 233128 2 + 1383 Cysteinyl-tRNA synthetase (EC 6.1.1.16) Zinc regulated enzymes;
tRNA aminoacylation, Cys
fig|6666666.67468.peg.2992 CDS gi|344046085|gb|AFYA01000001.1| 233160 234101 3 + 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67468.peg.2993 CDS gi|344046085|gb|AFYA01000001.1| 234286 234146 -1 - 141 hypothetical protein - none -
fig|6666666.67468.peg.2994 CDS gi|344046085|gb|AFYA01000001.1| 234159 234929 3 + 771 FIG00545377: hypothetical protein - none -
fig|6666666.67468.peg.2995 CDS gi|344046085|gb|AFYA01000001.1| 235095 236408 3 + 1314 major facilitator superfamily MFS_1 - none -
fig|6666666.67468.peg.2996 CDS gi|344046085|gb|AFYA01000001.1| 236409 237473 3 + 1065 oxidoreductase domain protein - none -
fig|6666666.67468.peg.2997 CDS gi|344046085|gb|AFYA01000001.1| 237486 238295 3 + 810 FIG00547385: hypothetical protein - none -
fig|6666666.67468.peg.2998 CDS gi|344046085|gb|AFYA01000001.1| 238296 239996 3 + 1701 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - none -
fig|6666666.67468.peg.2999 CDS gi|344046085|gb|AFYA01000001.1| 240534 240349 -3 - 186 hypothetical protein - none -
fig|6666666.67468.peg.3000 CDS gi|344046085|gb|AFYA01000001.1| 241375 240494 -1 - 882 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67468.peg.3001 CDS gi|344046085|gb|AFYA01000001.1| 242068 241376 -1 - 693 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67468.peg.3002 CDS gi|344046085|gb|AFYA01000001.1| 243017 242079 -2 - 939 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67468.peg.3003 CDS gi|344046085|gb|AFYA01000001.1| 243118 244200 1 + 1083 Transcriptional regulator, LacI family - none -
fig|6666666.67468.peg.3004 CDS gi|344046085|gb|AFYA01000001.1| 245003 244233 -2 - 771 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67468.peg.3005 CDS gi|344046085|gb|AFYA01000001.1| 245546 245058 -2 - 489 FIG00544334: hypothetical protein - none -
fig|6666666.67468.peg.3006 CDS gi|344046085|gb|AFYA01000001.1| 247000 245543 -1 - 1458 Trehalose-6-phosphate synthase (EC 2.4.1.15) - none -
fig|6666666.67468.peg.3007 CDS gi|344046085|gb|AFYA01000001.1| 247342 247013 -1 - 330 Putative uncharacterized protein - none -
fig|6666666.67468.peg.3008 CDS gi|344046085|gb|AFYA01000001.1| 248912 247422 -2 - 1491 Putative amino acid export carrier protein - none -
fig|6666666.67468.peg.3009 CDS gi|344046085|gb|AFYA01000001.1| 249720 249319 -3 - 402 hypothetical protein - none -
fig|6666666.67468.peg.3010 CDS gi|344046085|gb|AFYA01000001.1| 249968 250399 2 + 432 FIG00546847: hypothetical protein - none -
fig|6666666.67468.peg.3011 CDS gi|344046085|gb|AFYA01000001.1| 250474 251289 1 + 816 hypothetical protein - none -
fig|6666666.67468.peg.3012 CDS gi|344046085|gb|AFYA01000001.1| 252091 251276 -1 - 816 FIG00545315: hypothetical protein - none -
fig|6666666.67468.peg.3013 CDS gi|344046085|gb|AFYA01000001.1| 252158 253120 2 + 963 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67468.peg.3014 CDS gi|344046085|gb|AFYA01000001.1| 253136 253309 2 + 174 hypothetical protein - none -
fig|6666666.67468.peg.3015 CDS gi|344046085|gb|AFYA01000001.1| 253517 254404 2 + 888 transcriptional regulator - none -
fig|6666666.67468.peg.3016 CDS gi|344046085|gb|AFYA01000001.1| 254709 256061 3 + 1353 Permeases of the major facilitator superfamily - none -
fig|6666666.67468.peg.3017 CDS gi|344046085|gb|AFYA01000001.1| 256109 256402 2 + 294 hypothetical protein - none -
fig|6666666.67468.peg.3018 CDS gi|344046085|gb|AFYA01000001.1| 256404 257495 3 + 1092 Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-) - none -
fig|6666666.67468.peg.3019 CDS gi|344046085|gb|AFYA01000001.1| 257488 259161 1 + 1674 hypothetical protein - none -
fig|6666666.67468.peg.3020 CDS gi|344046085|gb|AFYA01000001.1| 259193 260971 2 + 1779 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - none -
fig|6666666.67468.peg.3021 CDS gi|344046085|gb|AFYA01000001.1| 261143 263287 2 + 2145 FIG00547205: hypothetical protein - none -
fig|6666666.67468.peg.3022 CDS gi|344046085|gb|AFYA01000001.1| 264628 263306 -1 - 1323 Permease - none -
fig|6666666.67468.peg.3023 CDS gi|344046085|gb|AFYA01000001.1| 265185 264652 -3 - 534 FIG00548485: hypothetical protein - none -
fig|6666666.67468.peg.3024 CDS gi|344046085|gb|AFYA01000001.1| 266659 265175 -1 - 1485 FIG00544776: hypothetical protein - none -
fig|6666666.67468.peg.3025 CDS gi|344046085|gb|AFYA01000001.1| 266910 267086 3 + 177 hypothetical protein - none -
fig|6666666.67468.peg.3026 CDS gi|344046085|gb|AFYA01000001.1| 267120 268859 3 + 1740 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67468.peg.3027 CDS gi|344046085|gb|AFYA01000001.1| 268856 269887 2 + 1032 METAL-ACTIVATED PYRIDOXAL ENZYME - none -
fig|6666666.67468.peg.3028 CDS gi|344046085|gb|AFYA01000001.1| 269935 270690 1 + 756 FIG00545455: hypothetical protein - none -
fig|6666666.67468.peg.3029 CDS gi|344046085|gb|AFYA01000001.1| 270810 271517 3 + 708 two-component system, response regulator - none -
fig|6666666.67468.peg.3030 CDS gi|344046085|gb|AFYA01000001.1| 271526 272983 2 + 1458 putative sensor kinase - none -
fig|6666666.67468.peg.3031 CDS gi|344046085|gb|AFYA01000001.1| 273635 272961 -2 - 675 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67468.peg.3032 CDS gi|344046085|gb|AFYA01000001.1| 274910 273639 -2 - 1272 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67468.peg.3033 CDS gi|344046085|gb|AFYA01000001.1| 275026 276471 1 + 1446 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67468.peg.3034 CDS gi|344046085|gb|AFYA01000001.1| 276529 277284 1 + 756 SAM-dependent methyltransferase - none -
fig|6666666.67468.peg.3035 CDS gi|344046085|gb|AFYA01000001.1| 278038 277628 -1 - 411 HIT family protein - none -
fig|6666666.67468.peg.3036 CDS gi|344046085|gb|AFYA01000001.1| 278241 278071 -3 - 171 FIG00548145: hypothetical protein - none -
fig|6666666.67468.peg.3037 CDS gi|344046085|gb|AFYA01000001.1| 278203 279468 1 + 1266 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67468.peg.3038 CDS gi|344046085|gb|AFYA01000001.1| 279497 280648 2 + 1152 Valine--pyruvate aminotransferase (EC 2.6.1.66) ## AvtA Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67468.peg.3039 CDS gi|344046085|gb|AFYA01000001.1| 280692 282122 3 + 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67468.peg.3040 CDS gi|344046085|gb|AFYA01000001.1| 282514 282630 1 + 117 hypothetical protein - none -
fig|6666666.67468.peg.3041 CDS gi|344046085|gb|AFYA01000001.1| 282948 283841 3 + 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67468.peg.3042 CDS gi|344046085|gb|AFYA01000001.1| 283974 286094 3 + 2121 Protease II (EC 3.4.21.83) - none -
fig|6666666.67468.peg.3043 CDS gi|344046085|gb|AFYA01000001.1| 286421 287761 2 + 1341 Na+/H+-dicarboxylate symporter - none -
fig|6666666.67468.peg.3044 CDS gi|344046085|gb|AFYA01000001.1| 287806 288495 1 + 690 FIG00546625: hypothetical protein - none -
fig|6666666.67468.peg.3045 CDS gi|344046085|gb|AFYA01000001.1| 291665 288879 -2 - 2787 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67468.peg.3046 CDS gi|344046085|gb|AFYA01000001.1| 291853 292332 1 + 480 Glutathione peroxidase family protein - none -
fig|6666666.67468.peg.3047 CDS gi|344046085|gb|AFYA01000001.1| 292420 292665 1 + 246 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67468.peg.3048 CDS gi|344046085|gb|AFYA01000001.1| 292662 293333 3 + 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67468.peg.3049 CDS gi|344046085|gb|AFYA01000001.1| 293347 295635 1 + 2289 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67468.peg.3050 CDS gi|344046085|gb|AFYA01000001.1| 295736 296500 2 + 765 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67468.peg.3051 CDS gi|344046085|gb|AFYA01000001.1| 297551 296544 -2 - 1008 acyl-CoA hydrolase - none -
fig|6666666.67468.peg.3052 CDS gi|344046085|gb|AFYA01000001.1| 297823 297966 1 + 144 FIG00544811: hypothetical protein - none -
fig|6666666.67468.peg.3053 CDS gi|344046085|gb|AFYA01000001.1| 298055 299593 2 + 1539 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67468.peg.3054 CDS gi|344046085|gb|AFYA01000001.1| 299714 300826 2 + 1113 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67468.rna.1 RNA gi|344043361|gb|AFYA01000031.1| 15388 15460 1 + 73 tRNA-Lys-TTT - none -
fig|6666666.67468.rna.2 RNA gi|344043361|gb|AFYA01000031.1| 17330 17402 2 + 73 tRNA-Glu-TTC - none -
fig|6666666.67468.rna.3 RNA gi|344043388|gb|AFYA01000028.1| 62470 62543 1 + 74 tRNA-Leu-CAA - none -
fig|6666666.67468.rna.4 RNA gi|344043553|gb|AFYA01000024.1| 35846 35774 -2 - 73 tRNA-Arg-CCT - none -
fig|6666666.67468.rna.5 RNA gi|344043658|gb|AFYA01000023.1| 7423 7350 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.67468.rna.6 RNA gi|344043818|gb|AFYA01000022.1| 10836 10908 3 + 73 tRNA-Ala-GGC - none -
fig|6666666.67468.rna.7 RNA gi|344043818|gb|AFYA01000022.1| 43343 43424 2 + 82 tRNA-Leu-TAG - none -
fig|6666666.67468.rna.8 RNA gi|344043946|gb|AFYA01000020.1| 378 1 -3 - 378 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67468.rna.9 RNA gi|344043985|gb|AFYA01000017.1| 139 51 -1 - 89 tRNA-Ser-GCT - none -
fig|6666666.67468.rna.10 RNA gi|344043985|gb|AFYA01000017.1| 11810 11726 -2 - 85 tRNA-Pseudo-TGA - none -
fig|6666666.67468.rna.11 RNA gi|344044024|gb|AFYA01000016.1| 310 238 -1 - 73 tRNA-Gly-GCC - none -
fig|6666666.67468.rna.12 RNA gi|344044024|gb|AFYA01000016.1| 418 347 -1 - 72 tRNA-Val-GAC - none -
fig|6666666.67468.rna.13 RNA gi|344044024|gb|AFYA01000016.1| 499 429 -1 - 71 tRNA-Cys-GCA - none -
fig|6666666.67468.rna.14 RNA gi|344044024|gb|AFYA01000016.1| 613 541 -1 - 73 tRNA-Gly-GCC - none -
fig|6666666.67468.rna.15 RNA gi|344044024|gb|AFYA01000016.1| 721 650 -1 - 72 tRNA-Val-GAC - none -
fig|6666666.67468.rna.16 RNA gi|344044024|gb|AFYA01000016.1| 827 755 -2 - 73 tRNA-Gly-GCC - none -
fig|6666666.67468.rna.17 RNA gi|344044024|gb|AFYA01000016.1| 1175 1246 2 + 72 tRNA-Val-CAC - none -
fig|6666666.67468.rna.18 RNA gi|344044286|gb|AFYA01000014.1| 53 125 2 + 73 tRNA-Phe-GAA - none -
fig|6666666.67468.rna.19 RNA gi|344044294|gb|AFYA01000013.1| 29500 29428 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.67468.rna.20 RNA gi|344044294|gb|AFYA01000013.1| 46776 46703 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.67468.rna.21 RNA gi|344044294|gb|AFYA01000013.1| 48558 48630 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.67468.rna.22 RNA gi|344044294|gb|AFYA01000013.1| 48770 48842 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.67468.rna.23 RNA gi|344044354|gb|AFYA01000012.1| 30792 30721 -3 - 72 tRNA-Gln-TTG - none -
fig|6666666.67468.rna.24 RNA gi|344044354|gb|AFYA01000012.1| 50993 51066 2 + 74 tRNA-Leu-TAA - none -
fig|6666666.67468.rna.25 RNA gi|344044480|gb|AFYA01000011.1| 12914 12842 -2 - 73 tRNA-Lys-CTT - none -
fig|6666666.67468.rna.26 RNA gi|344044480|gb|AFYA01000011.1| 13077 13005 -3 - 73 tRNA-Lys-CTT - none -
fig|6666666.67468.rna.27 RNA gi|344044480|gb|AFYA01000011.1| 38592 38520 -3 - 73 tRNA-His-GTG - none -
fig|6666666.67468.rna.28 RNA gi|344044480|gb|AFYA01000011.1| 40529 40456 -2 - 74 tRNA-Arg-TCT - none -
fig|6666666.67468.rna.29 RNA gi|344044480|gb|AFYA01000011.1| 91328 91399 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.67468.rna.30 RNA gi|344044480|gb|AFYA01000011.1| 93707 93780 2 + 74 tRNA-Pro-TGG - none -
fig|6666666.67468.rna.31 RNA gi|344044881|gb|AFYA01000009.1| 161664 161579 -3 - 86 tRNA-Leu-GAG - none -
fig|6666666.67468.rna.32 RNA gi|344044881|gb|AFYA01000009.1| 161836 161751 -1 - 86 tRNA-Leu-GAG - none -
fig|6666666.67468.rna.33 RNA gi|344044881|gb|AFYA01000009.1| 257891 257964 2 + 74 tRNA-Pro-GGG - none -
fig|6666666.67468.rna.34 RNA gi|344045136|gb|AFYA01000008.1| 2624 2711 2 + 88 tRNA-Ser-CGA - none -
fig|6666666.67468.rna.35 RNA gi|344045136|gb|AFYA01000008.1| 13088 13004 -2 - 85 tRNA-Pseudo-GGA - none -
fig|6666666.67468.rna.36 RNA gi|344045136|gb|AFYA01000008.1| 70159 70086 -1 - 74 tRNA-Pro-CGG - none -
fig|6666666.67468.rna.37 RNA gi|344045136|gb|AFYA01000008.1| 107188 107260 1 + 73 tRNA-Thr-CGT - none -
fig|6666666.67468.rna.38 RNA gi|344045397|gb|AFYA01000006.1| 165249 165322 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.67468.rna.39 RNA gi|344045397|gb|AFYA01000006.1| 165336 165408 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67468.rna.40 RNA gi|344045397|gb|AFYA01000006.1| 173837 173909 2 + 73 tRNA-Ala-TGC - none -
fig|6666666.67468.rna.41 RNA gi|344045397|gb|AFYA01000006.1| 189021 189094 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.67468.rna.42 RNA gi|344045397|gb|AFYA01000006.1| 189108 189180 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67468.rna.43 RNA gi|344045397|gb|AFYA01000006.1| 214371 214454 3 + 84 tRNA-Leu-CAG - none -
fig|6666666.67468.rna.44 RNA gi|344045623|gb|AFYA01000005.1| 96981 97053 3 + 73 tRNA-Arg-CCG - none -
fig|6666666.67468.rna.45 RNA gi|344045780|gb|AFYA01000004.1| 11227 11309 1 + 83 tRNA-Tyr-GTA - none -
fig|6666666.67468.rna.46 RNA gi|344045780|gb|AFYA01000004.1| 11932 12004 1 + 73 tRNA-Thr-GGT - none -
fig|6666666.67468.rna.47 RNA gi|344045780|gb|AFYA01000004.1| 12257 12329 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.67468.rna.48 RNA gi|344045780|gb|AFYA01000004.1| 12368 12439 2 + 72 tRNA-Met-CAT - none -
fig|6666666.67468.rna.49 RNA gi|344045780|gb|AFYA01000004.1| 12536 12608 2 + 73 tRNA-Trp-CCA - none -
fig|6666666.67468.rna.50 RNA gi|344046049|gb|AFYA01000002.1| 158 86 -2 - 73 tRNA-Glu-CTC - none -
fig|6666666.67468.rna.51 RNA gi|344046049|gb|AFYA01000002.1| 268 197 -1 - 72 tRNA-Gln-CTG - none -
fig|6666666.67468.rna.52 RNA gi|344046085|gb|AFYA01000001.1| 8408 8338 -2 - 71 tRNA-Gly-CCC - none -
fig|6666666.67468.rna.53 RNA gi|344046085|gb|AFYA01000001.1| 249039 249111 3 + 73 tRNA-Thr-TGT - none -