fig|6666666.67480.peg.1 CDS gi|543383377|gb|AVFF01000106.1| 974 816 -2 - 159 hypothetical protein - none -
fig|6666666.67480.peg.2 CDS gi|543383681|gb|AVFF01000099.1| 835 23 -1 - 813 Mobile element protein - none -
fig|6666666.67480.peg.3 CDS gi|543383681|gb|AVFF01000099.1| 1203 883 -3 - 321 Mobile element protein - none -
fig|6666666.67480.peg.4 CDS gi|543383716|gb|AVFF01000096.1| 53 1552 2 + 1500 hypothetical protein - none -
fig|6666666.67480.peg.5 CDS gi|543383716|gb|AVFF01000096.1| 1971 1774 -3 - 198 hypothetical protein - none -
fig|6666666.67480.peg.6 CDS gi|543383716|gb|AVFF01000096.1| 2227 1943 -1 - 285 hypothetical protein - none -
fig|6666666.67480.peg.7 CDS gi|543383716|gb|AVFF01000096.1| 2585 2220 -2 - 366 ABC transporter - none -
fig|6666666.67480.peg.8 CDS gi|543383716|gb|AVFF01000096.1| 3631 2585 -1 - 1047 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.9 CDS gi|543383716|gb|AVFF01000096.1| 4757 3690 -2 - 1068 Conserved protein - none -
fig|6666666.67480.peg.10 CDS gi|543383716|gb|AVFF01000096.1| 4900 5613 1 + 714 two-component system, response regulator - none -
fig|6666666.67480.peg.11 CDS gi|543383716|gb|AVFF01000096.1| 5680 7329 1 + 1650 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67480.peg.12 CDS gi|543383716|gb|AVFF01000096.1| 7846 7421 -1 - 426 HIT family protein - none -
fig|6666666.67480.peg.13 CDS gi|543383716|gb|AVFF01000096.1| 7913 9268 2 + 1356 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67480.peg.14 CDS gi|543383716|gb|AVFF01000096.1| 9393 10097 3 + 705 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67480.peg.15 CDS gi|543383716|gb|AVFF01000096.1| 10121 10810 2 + 690 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67480.peg.16 CDS gi|543383716|gb|AVFF01000096.1| 10862 11761 2 + 900 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67480.peg.17 CDS gi|543383716|gb|AVFF01000096.1| 11860 14124 1 + 2265 Protease II (EC 3.4.21.83) - none -
fig|6666666.67480.peg.18 CDS gi|543383716|gb|AVFF01000096.1| 14330 15568 2 + 1239 hypothetical protein - none -
fig|6666666.67480.peg.19 CDS gi|543383716|gb|AVFF01000096.1| 15641 15943 2 + 303 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67480.peg.20 CDS gi|543383716|gb|AVFF01000096.1| 15943 16623 1 + 681 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67480.peg.21 CDS gi|543383716|gb|AVFF01000096.1| 16636 17088 1 + 453 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67480.peg.22 CDS gi|543383716|gb|AVFF01000096.1| 17088 18941 3 + 1854 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67480.peg.23 CDS gi|543383716|gb|AVFF01000096.1| 19243 18995 -1 - 249 hypothetical protein - none -
fig|6666666.67480.peg.24 CDS gi|543383716|gb|AVFF01000096.1| 19262 19849 2 + 588 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67480.peg.25 CDS gi|543383716|gb|AVFF01000096.1| 20185 20328 1 + 144 hypothetical protein - none -
fig|6666666.67480.peg.26 CDS gi|543383716|gb|AVFF01000096.1| 20475 21977 3 + 1503 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67480.peg.27 CDS gi|543383716|gb|AVFF01000096.1| 22046 23128 2 + 1083 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67480.peg.28 CDS gi|543383716|gb|AVFF01000096.1| 23459 23280 -2 - 180 hypothetical protein - none -
fig|6666666.67480.peg.29 CDS gi|543383716|gb|AVFF01000096.1| 24815 23580 -2 - 1236 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67480.peg.30 CDS gi|543383716|gb|AVFF01000096.1| 24856 25806 1 + 951 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67480.peg.31 CDS gi|543383716|gb|AVFF01000096.1| 26582 25899 -2 - 684 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67480.peg.32 CDS gi|543383716|gb|AVFF01000096.1| 26668 27702 1 + 1035 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.67480.peg.33 CDS gi|543383716|gb|AVFF01000096.1| 28499 27699 -2 - 801 hypothetical protein - none -
fig|6666666.67480.peg.34 CDS gi|543383716|gb|AVFF01000096.1| 28530 29624 3 + 1095 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67480.peg.35 CDS gi|543383716|gb|AVFF01000096.1| 30743 29649 -2 - 1095 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67480.peg.36 CDS gi|543383716|gb|AVFF01000096.1| 30862 30999 1 + 138 hypothetical protein - none -
fig|6666666.67480.peg.37 CDS gi|543383716|gb|AVFF01000096.1| 31091 32602 2 + 1512 putative coenzyme A transferase - none -
fig|6666666.67480.peg.38 CDS gi|543383716|gb|AVFF01000096.1| 35495 33174 -2 - 2322 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67480.peg.39 CDS gi|543383716|gb|AVFF01000096.1| 35784 35524 -3 - 261 heavy metal-associated domain protein - none -
fig|6666666.67480.peg.40 CDS gi|543383716|gb|AVFF01000096.1| 35928 37406 3 + 1479 Putative secreted protein - none -
fig|6666666.67480.peg.41 CDS gi|543383716|gb|AVFF01000096.1| 37805 37407 -2 - 399 Repressor CsoR of the copZA operon Copper Transport System
fig|6666666.67480.peg.42 CDS gi|543383716|gb|AVFF01000096.1| 39157 38315 -1 - 843 putative oxidoreductase - none -
fig|6666666.67480.peg.43 CDS gi|543383716|gb|AVFF01000096.1| 39772 39909 1 + 138 hypothetical protein - none -
fig|6666666.67480.peg.44 CDS gi|543383716|gb|AVFF01000096.1| 39978 40271 3 + 294 hypothetical protein - none -
fig|6666666.67480.peg.45 CDS gi|543383716|gb|AVFF01000096.1| 41096 40530 -2 - 567 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67480.peg.46 CDS gi|543383716|gb|AVFF01000096.1| 42052 41117 -1 - 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67480.peg.47 CDS gi|543383716|gb|AVFF01000096.1| 42372 43214 3 + 843 Putative transcriptional regulator - none -
fig|6666666.67480.peg.48 CDS gi|543383716|gb|AVFF01000096.1| 43245 44507 3 + 1263 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67480.peg.49 CDS gi|543383716|gb|AVFF01000096.1| 44650 45453 1 + 804 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.50 CDS gi|543383716|gb|AVFF01000096.1| 45474 48071 3 + 2598 ABC-type transporter, permease component - none -
fig|6666666.67480.peg.51 CDS gi|543383716|gb|AVFF01000096.1| 48115 48594 1 + 480 FIG00544597: hypothetical protein - none -
fig|6666666.67480.peg.52 CDS gi|543383716|gb|AVFF01000096.1| 48660 49379 3 + 720 hypothetical protein - none -
fig|6666666.67480.peg.53 CDS gi|543383716|gb|AVFF01000096.1| 50957 49767 -2 - 1191 cytochrome P450-like putative monoxygenase,C-terminal fragment - none -
fig|6666666.67480.peg.54 CDS gi|543383716|gb|AVFF01000096.1| 51054 51596 3 + 543 hypothetical protein - none -
fig|6666666.67480.peg.55 CDS gi|543383716|gb|AVFF01000096.1| 52490 51648 -2 - 843 hypothetical protein - none -
fig|6666666.67480.peg.56 CDS gi|543383716|gb|AVFF01000096.1| 52548 53306 3 + 759 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.67480.peg.57 CDS gi|543383716|gb|AVFF01000096.1| 54168 53314 -3 - 855 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67480.peg.58 CDS gi|543383716|gb|AVFF01000096.1| 54198 55631 3 + 1434 FIG00544486: hypothetical protein - none -
fig|6666666.67480.peg.59 CDS gi|543383716|gb|AVFF01000096.1| 55816 55938 1 + 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67480.peg.60 CDS gi|543383716|gb|AVFF01000096.1| 56401 56646 1 + 246 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67480.peg.61 CDS gi|543383716|gb|AVFF01000096.1| 56791 57231 1 + 441 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67480.peg.62 CDS gi|543383716|gb|AVFF01000096.1| 57324 59486 3 + 2163 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67480.peg.63 CDS gi|543383716|gb|AVFF01000096.1| 60105 59539 -3 - 567 Transcriptional regulator, GntR family - none -
fig|6666666.67480.peg.64 CDS gi|543383716|gb|AVFF01000096.1| 60476 61459 2 + 984 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67480.peg.65 CDS gi|543383716|gb|AVFF01000096.1| 61874 63616 2 + 1743 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67480.peg.66 CDS gi|543383716|gb|AVFF01000096.1| 63857 65158 2 + 1302 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67480.peg.67 CDS gi|543383716|gb|AVFF01000096.1| 67337 65199 -2 - 2139 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67480.peg.68 CDS gi|543383716|gb|AVFF01000096.1| 67883 67338 -2 - 546 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.69 CDS gi|543383716|gb|AVFF01000096.1| 68682 67864 -3 - 819 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.70 CDS gi|543383716|gb|AVFF01000096.1| 68832 69218 3 + 387 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67480.peg.71 CDS gi|543383716|gb|AVFF01000096.1| 69270 69803 3 + 534 Transcriptional regulatory protein - none -
fig|6666666.67480.peg.72 CDS gi|543383716|gb|AVFF01000096.1| 69854 70903 2 + 1050 possible hydrolase - none -
fig|6666666.67480.peg.73 CDS gi|543383716|gb|AVFF01000096.1| 70919 71629 2 + 711 hypothetical protein - none -
fig|6666666.67480.peg.74 CDS gi|543383716|gb|AVFF01000096.1| 71793 72626 3 + 834 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.75 CDS gi|543383716|gb|AVFF01000096.1| 72695 73468 2 + 774 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67480.peg.76 CDS gi|543383716|gb|AVFF01000096.1| 73498 74289 1 + 792 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67480.peg.77 CDS gi|543383716|gb|AVFF01000096.1| 74289 74930 3 + 642 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67480.peg.78 CDS gi|543383716|gb|AVFF01000096.1| 75367 75005 -1 - 363 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67480.peg.79 CDS gi|543383716|gb|AVFF01000096.1| 75804 75367 -3 - 438 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67480.peg.80 CDS gi|543383716|gb|AVFF01000096.1| 76688 76077 -2 - 612 FIG00544791: hypothetical protein - none -
fig|6666666.67480.peg.81 CDS gi|543383716|gb|AVFF01000096.1| 77622 76795 -3 - 828 short chain dehydrogenase - none -
fig|6666666.67480.peg.82 CDS gi|543383716|gb|AVFF01000096.1| 77718 77843 3 + 126 hypothetical protein - none -
fig|6666666.67480.peg.83 CDS gi|543383716|gb|AVFF01000096.1| 77856 78776 3 + 921 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67480.peg.84 CDS gi|543383716|gb|AVFF01000096.1| 78780 80303 3 + 1524 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67480.peg.85 CDS gi|543383716|gb|AVFF01000096.1| 80300 80977 2 + 678 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67480.peg.86 CDS gi|543383716|gb|AVFF01000096.1| 80982 81386 3 + 405 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.67480.peg.87 CDS gi|543383716|gb|AVFF01000096.1| 82044 81424 -3 - 621 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.88 CDS gi|543383716|gb|AVFF01000096.1| 82320 82120 -3 - 201 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67480.peg.89 CDS gi|543383716|gb|AVFF01000096.1| 82591 82346 -1 - 246 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67480.peg.90 CDS gi|543383716|gb|AVFF01000096.1| 82828 83109 1 + 282 hypothetical protein - none -
fig|6666666.67480.peg.91 CDS gi|543383716|gb|AVFF01000096.1| 83733 83149 -3 - 585 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.92 CDS gi|543383716|gb|AVFF01000096.1| 83842 85188 1 + 1347 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67480.peg.93 CDS gi|543383716|gb|AVFF01000096.1| 85258 86049 1 + 792 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67480.peg.94 CDS gi|543384045|gb|AVFF01000085.1| 206 1243 2 + 1038 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.95 CDS gi|543384045|gb|AVFF01000085.1| 1240 3063 1 + 1824 ABC-type transport system ATPase component - none -
fig|6666666.67480.peg.96 CDS gi|543384045|gb|AVFF01000085.1| 3830 4210 2 + 381 Putative exported esterase/hydrolase - none -
fig|6666666.67480.peg.97 CDS gi|543384045|gb|AVFF01000085.1| 4297 5973 1 + 1677 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67480.peg.98 CDS gi|543384045|gb|AVFF01000085.1| 5948 6598 2 + 651 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67480.peg.99 CDS gi|543384045|gb|AVFF01000085.1| 6804 7235 3 + 432 FIG00672531: hypothetical protein - none -
fig|6666666.67480.peg.100 CDS gi|543384045|gb|AVFF01000085.1| 7245 7994 3 + 750 FIG00545122: hypothetical protein - none -
fig|6666666.67480.peg.101 CDS gi|543384045|gb|AVFF01000085.1| 8292 8876 3 + 585 FIG00544641: hypothetical protein - none -
fig|6666666.67480.peg.102 CDS gi|543384045|gb|AVFF01000085.1| 10460 8907 -2 - 1554 Putative secreted protein - none -
fig|6666666.67480.peg.103 CDS gi|543384045|gb|AVFF01000085.1| 11310 10438 -3 - 873 FIG00545058: hypothetical protein - none -
fig|6666666.67480.peg.104 CDS gi|543384045|gb|AVFF01000085.1| 11469 11353 -3 - 117 hypothetical protein - none -
fig|6666666.67480.peg.105 CDS gi|543384045|gb|AVFF01000085.1| 12803 11529 -2 - 1275 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67480.peg.106 CDS gi|543384045|gb|AVFF01000085.1| 13019 14569 2 + 1551 Sodium/di- and tricarboxylate cotransporter - none -
fig|6666666.67480.peg.107 CDS gi|543384045|gb|AVFF01000085.1| 16060 14594 -1 - 1467 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67480.peg.108 CDS gi|543384045|gb|AVFF01000085.1| 16174 16647 1 + 474 FIG00544657: hypothetical protein - none -
fig|6666666.67480.peg.109 CDS gi|543384045|gb|AVFF01000085.1| 18183 16675 -3 - 1509 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.67480.peg.110 CDS gi|543384045|gb|AVFF01000085.1| 19792 18395 -1 - 1398 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67480.peg.111 CDS gi|543384045|gb|AVFF01000085.1| 19944 21257 3 + 1314 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67480.peg.112 CDS gi|543384045|gb|AVFF01000085.1| 21526 21293 -1 - 234 hypothetical protein - none -
fig|6666666.67480.peg.113 CDS gi|543384045|gb|AVFF01000085.1| 22935 21661 -3 - 1275 hypothetical protein - none -
fig|6666666.67480.peg.114 CDS gi|543384045|gb|AVFF01000085.1| 23852 23139 -2 - 714 Putative secreted protein - none -
fig|6666666.67480.peg.115 CDS gi|543384045|gb|AVFF01000085.1| 23995 23852 -1 - 144 hypothetical protein - none -
fig|6666666.67480.peg.116 CDS gi|543384045|gb|AVFF01000085.1| 24436 24822 1 + 387 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67480.peg.117 CDS gi|543384045|gb|AVFF01000085.1| 25828 24947 -1 - 882 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67480.peg.118 CDS gi|543384045|gb|AVFF01000085.1| 27518 25836 -2 - 1683 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67480.peg.119 CDS gi|543384045|gb|AVFF01000085.1| 28234 27569 -1 - 666 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67480.peg.120 CDS gi|543384045|gb|AVFF01000085.1| 31069 28259 -1 - 2811 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67480.peg.121 CDS gi|543384045|gb|AVFF01000085.1| 32202 31081 -3 - 1122 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67480.peg.122 CDS gi|543384045|gb|AVFF01000085.1| 32606 32283 -2 - 324 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67480.peg.123 CDS gi|543384045|gb|AVFF01000085.1| 33671 32670 -2 - 1002 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67480.peg.124 CDS gi|543384045|gb|AVFF01000085.1| 34675 33668 -1 - 1008 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67480.peg.125 CDS gi|543384045|gb|AVFF01000085.1| 36117 34681 -3 - 1437 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67480.peg.126 CDS gi|543384045|gb|AVFF01000085.1| 36323 36114 -2 - 210 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67480.peg.127 CDS gi|543384045|gb|AVFF01000085.1| 37997 36450 -2 - 1548 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67480.peg.128 CDS gi|543384045|gb|AVFF01000085.1| 39619 38093 -1 - 1527 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67480.peg.129 CDS gi|543384045|gb|AVFF01000085.1| 40680 39844 -3 - 837 RNA methyltransferase - none -
fig|6666666.67480.peg.130 CDS gi|543384045|gb|AVFF01000085.1| 42070 40784 -1 - 1287 aspartyl aminopeptidase - none -
fig|6666666.67480.peg.131 CDS gi|543384045|gb|AVFF01000085.1| 42162 43016 3 + 855 RecB family exonuclease - none -
fig|6666666.67480.peg.132 CDS gi|543384045|gb|AVFF01000085.1| 44779 43106 -1 - 1674 Formate--tetrahydrofolate ligase (EC 6.3.4.3) One-carbon metabolism by tetrahydropterines
fig|6666666.67480.peg.133 CDS gi|543384045|gb|AVFF01000085.1| 46406 44886 -2 - 1521 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67480.peg.134 CDS gi|543384045|gb|AVFF01000085.1| 47159 46482 -2 - 678 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67480.peg.135 CDS gi|543384045|gb|AVFF01000085.1| 47530 47351 -1 - 180 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67480.peg.136 CDS gi|543384045|gb|AVFF01000085.1| 47615 47493 -2 - 123 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67480.peg.137 CDS gi|543384045|gb|AVFF01000085.1| 48896 47643 -2 - 1254 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67480.peg.138 CDS gi|543384045|gb|AVFF01000085.1| 49943 48918 -2 - 1026 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67480.peg.139 CDS gi|543384045|gb|AVFF01000085.1| 50033 51001 2 + 969 FIG00545923: hypothetical protein - none -
fig|6666666.67480.peg.140 CDS gi|543384045|gb|AVFF01000085.1| 51004 52179 1 + 1176 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.141 CDS gi|543384045|gb|AVFF01000085.1| 52592 52176 -2 - 417 hypothetical membrane protein - none -
fig|6666666.67480.peg.142 CDS gi|543384045|gb|AVFF01000085.1| 53155 52616 -1 - 540 Phospholipid-binding protein - none -
fig|6666666.67480.peg.143 CDS gi|543384045|gb|AVFF01000085.1| 54426 53614 -3 - 813 FIG00544869: hypothetical protein - none -
fig|6666666.67480.peg.144 CDS gi|543384045|gb|AVFF01000085.1| 55562 54417 -2 - 1146 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67480.peg.145 CDS gi|543384045|gb|AVFF01000085.1| 56761 55562 -1 - 1200 Putative periplasmic substrate-binding transport protein - none -
fig|6666666.67480.peg.146 CDS gi|543384045|gb|AVFF01000085.1| 57027 57827 3 + 801 DedA family protein paralog - none -
fig|6666666.67480.peg.147 CDS gi|543384045|gb|AVFF01000085.1| 57930 58538 3 + 609 FIG00545282: hypothetical protein - none -
fig|6666666.67480.peg.148 CDS gi|543384045|gb|AVFF01000085.1| 58999 58862 -1 - 138 hypothetical protein - none -
fig|6666666.67480.peg.149 CDS gi|543384045|gb|AVFF01000085.1| 59348 60118 2 + 771 hypothetical protein - none -
fig|6666666.67480.peg.150 CDS gi|543384045|gb|AVFF01000085.1| 61254 60181 -3 - 1074 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.151 CDS gi|543384045|gb|AVFF01000085.1| 63128 61302 -2 - 1827 hypothetical protein - none -
fig|6666666.67480.peg.152 CDS gi|543384045|gb|AVFF01000085.1| 64099 63569 -1 - 531 hypothetical protein - none -
fig|6666666.67480.peg.153 CDS gi|543384045|gb|AVFF01000085.1| 64347 67166 3 + 2820 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
TCA Cycle
fig|6666666.67480.peg.154 CDS gi|543384045|gb|AVFF01000085.1| 67314 67883 3 + 570 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.155 CDS gi|543384045|gb|AVFF01000085.1| 67909 68658 1 + 750 GMP synthase - none -
fig|6666666.67480.peg.156 CDS gi|543384045|gb|AVFF01000085.1| 69359 68655 -2 - 705 hypothetical protein - none -
fig|6666666.67480.peg.157 CDS gi|543384045|gb|AVFF01000085.1| 69429 69677 3 + 249 ACT domain protein - none -
fig|6666666.67480.peg.158 CDS gi|543384045|gb|AVFF01000085.1| 69736 71100 1 + 1365 FIG00848225: hypothetical protein - none -
fig|6666666.67480.peg.159 CDS gi|543384045|gb|AVFF01000085.1| 71895 71161 -3 - 735 Phage protein - none -
fig|6666666.67480.peg.161 CDS gi|543384045|gb|AVFF01000085.1| 74138 75046 2 + 909 ABC transporter, ATP-binding protein - none -
fig|6666666.67480.peg.162 CDS gi|543384045|gb|AVFF01000085.1| 75051 75812 3 + 762 putative membrane protein [KO:K01992] - none -
fig|6666666.67480.peg.163 CDS gi|543384045|gb|AVFF01000085.1| 75813 76958 3 + 1146 sensor histidine kinase - none -
fig|6666666.67480.peg.164 CDS gi|543384045|gb|AVFF01000085.1| 76955 77563 2 + 609 putative two-component system response regulator - none -
fig|6666666.67480.peg.165 CDS gi|543384045|gb|AVFF01000085.1| 78118 77684 -1 - 435 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67480.peg.166 CDS gi|543384045|gb|AVFF01000085.1| 78570 78118 -3 - 453 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67480.peg.167 CDS gi|543384045|gb|AVFF01000085.1| 79818 78571 -3 - 1248 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67480.peg.168 CDS gi|543384045|gb|AVFF01000085.1| 80647 79892 -1 - 756 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67480.peg.169 CDS gi|543384045|gb|AVFF01000085.1| 81891 80725 -3 - 1167 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67480.peg.170 CDS gi|543384045|gb|AVFF01000085.1| 83335 81893 -1 - 1443 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67480.peg.171 CDS gi|543384045|gb|AVFF01000085.1| 84098 83316 -2 - 783 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67480.peg.172 CDS gi|543384045|gb|AVFF01000085.1| 84427 84128 -1 - 300 hypothetical protein - none -
fig|6666666.67480.peg.173 CDS gi|543384045|gb|AVFF01000085.1| 84872 85990 2 + 1119 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67480.peg.174 CDS gi|543384045|gb|AVFF01000085.1| 85987 86949 1 + 963 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67480.peg.175 CDS gi|543384045|gb|AVFF01000085.1| 86936 87703 2 + 768 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67480.peg.176 CDS gi|543384045|gb|AVFF01000085.1| 88075 88893 1 + 819 Cytochrome oxidase assembly protein - none -
fig|6666666.67480.peg.177 CDS gi|543384045|gb|AVFF01000085.1| 88962 89933 3 + 972 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67480.peg.178 CDS gi|543384045|gb|AVFF01000085.1| 90927 89995 -3 - 933 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67480.peg.179 CDS gi|543384045|gb|AVFF01000085.1| 91188 92093 3 + 906 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67480.peg.180 CDS gi|543384045|gb|AVFF01000085.1| 92050 94500 1 + 2451 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67480.peg.181 CDS gi|543384045|gb|AVFF01000085.1| 94566 96092 3 + 1527 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67480.peg.182 CDS gi|543384045|gb|AVFF01000085.1| 96135 97082 3 + 948 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67480.peg.183 CDS gi|543384045|gb|AVFF01000085.1| 97087 97809 1 + 723 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67480.peg.184 CDS gi|543384045|gb|AVFF01000085.1| 98202 97966 -3 - 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67480.peg.185 CDS gi|543384045|gb|AVFF01000085.1| 99181 98402 -1 - 780 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.186 CDS gi|543384045|gb|AVFF01000085.1| 100438 99224 -1 - 1215 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.187 CDS gi|543384045|gb|AVFF01000085.1| 101549 100503 -2 - 1047 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.188 CDS gi|543384045|gb|AVFF01000085.1| 102611 101571 -2 - 1041 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.67480.peg.189 CDS gi|543384045|gb|AVFF01000085.1| 103731 102616 -3 - 1116 Hypothetical protein UPF0052 - none -
fig|6666666.67480.peg.190 CDS gi|543384045|gb|AVFF01000085.1| 104724 103840 -3 - 885 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.67480.peg.191 CDS gi|543384045|gb|AVFF01000085.1| 105609 104758 -3 - 852 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67480.peg.192 CDS gi|543384045|gb|AVFF01000085.1| 106790 105582 -2 - 1209 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67480.peg.193 CDS gi|543384045|gb|AVFF01000085.1| 107368 106808 -1 - 561 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67480.peg.194 CDS gi|543384045|gb|AVFF01000085.1| 107778 107365 -3 - 414 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.67480.peg.195 CDS gi|543384045|gb|AVFF01000085.1| 109205 107928 -2 - 1278 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67480.peg.196 CDS gi|543384045|gb|AVFF01000085.1| 109957 109217 -1 - 741 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67480.peg.197 CDS gi|543384045|gb|AVFF01000085.1| 111052 109982 -1 - 1071 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67480.peg.198 CDS gi|543384045|gb|AVFF01000085.1| 111802 111053 -1 - 750 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67480.peg.199 CDS gi|543384045|gb|AVFF01000085.1| 113440 111848 -1 - 1593 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.67480.peg.200 CDS gi|543384045|gb|AVFF01000085.1| 114396 113437 -3 - 960 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67480.peg.201 CDS gi|543384045|gb|AVFF01000085.1| 116526 114451 -3 - 2076 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67480.peg.202 CDS gi|543384045|gb|AVFF01000085.1| 117779 116544 -2 - 1236 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.203 CDS gi|543384045|gb|AVFF01000085.1| 118874 117918 -2 - 957 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67480.peg.204 CDS gi|543384045|gb|AVFF01000085.1| 119169 118855 -3 - 315 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67480.peg.205 CDS gi|543384045|gb|AVFF01000085.1| 120815 119196 -2 - 1620 hypothetical protein - none -
fig|6666666.67480.peg.206 CDS gi|543384045|gb|AVFF01000085.1| 120952 120815 -1 - 138 hypothetical protein - none -
fig|6666666.67480.peg.207 CDS gi|543384347|gb|AVFF01000074.1| 993 1733 3 + 741 Fimbrial subunit type 2 precursor - none -
fig|6666666.67480.peg.208 CDS gi|543384347|gb|AVFF01000074.1| 1696 2484 1 + 789 Fimbrial subunit type 2 precursor - none -
fig|6666666.67480.peg.209 CDS gi|543384347|gb|AVFF01000074.1| 2569 3486 1 + 918 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67480.peg.210 CDS gi|543384347|gb|AVFF01000074.1| 3782 4531 2 + 750 hypothetical protein - none -
fig|6666666.67480.peg.211 CDS gi|543384347|gb|AVFF01000074.1| 4533 7703 3 + 3171 hypothetical protein - none -
fig|6666666.67480.peg.212 CDS gi|543384347|gb|AVFF01000074.1| 8212 7874 -1 - 339 Mobile element protein - none -
fig|6666666.67480.peg.213 CDS gi|543384347|gb|AVFF01000074.1| 8808 8954 3 + 147 transposase subunit A - none -
fig|6666666.67480.peg.214 CDS gi|543384347|gb|AVFF01000074.1| 9151 9032 -1 - 120 hypothetical protein - none -
fig|6666666.67480.peg.215 CDS gi|543384347|gb|AVFF01000074.1| 9373 9227 -1 - 147 hypothetical protein - none -
fig|6666666.67480.peg.216 CDS gi|543384347|gb|AVFF01000074.1| 9662 9519 -2 - 144 hypothetical protein - none -
fig|6666666.67480.peg.217 CDS gi|543384347|gb|AVFF01000074.1| 9759 10064 3 + 306 Mobile element protein - none -
fig|6666666.67480.peg.218 CDS gi|543384347|gb|AVFF01000074.1| 10210 12465 1 + 2256 Putative surface-anchored fimbrial subunit - none -
fig|6666666.67480.peg.219 CDS gi|543384347|gb|AVFF01000074.1| 12494 13288 2 + 795 FIG054872: Sortase-like protein - none -
fig|6666666.67480.peg.220 CDS gi|543384347|gb|AVFF01000074.1| 13371 13523 3 + 153 hypothetical protein - none -
fig|6666666.67480.peg.221 CDS gi|543384347|gb|AVFF01000074.1| 13566 15023 3 + 1458 FIG00545518: hypothetical protein - none -
fig|6666666.67480.peg.222 CDS gi|543384347|gb|AVFF01000074.1| 15201 15073 -3 - 129 hypothetical protein - none -
fig|6666666.67480.peg.223 CDS gi|543384347|gb|AVFF01000074.1| 15219 15461 3 + 243 hypothetical protein - none -
fig|6666666.67480.peg.224 CDS gi|543384347|gb|AVFF01000074.1| 15660 17288 3 + 1629 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.67480.peg.225 CDS gi|543384347|gb|AVFF01000074.1| 17288 18349 2 + 1062 putative transport protein - none -
fig|6666666.67480.peg.226 CDS gi|543384347|gb|AVFF01000074.1| 18340 19152 1 + 813 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67480.peg.227 CDS gi|543384347|gb|AVFF01000074.1| 19152 20768 3 + 1617 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.228 CDS gi|543384347|gb|AVFF01000074.1| 20824 22092 1 + 1269 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.67480.peg.229 CDS gi|543384347|gb|AVFF01000074.1| 22784 22380 -2 - 405 hypothetical protein - none -
fig|6666666.67480.peg.230 CDS gi|543384347|gb|AVFF01000074.1| 22759 27606 1 + 4848 DNA helicase - none -
fig|6666666.67480.peg.231 CDS gi|543384347|gb|AVFF01000074.1| 27702 29009 3 + 1308 membrane protein, putative - none -
fig|6666666.67480.peg.232 CDS gi|543384347|gb|AVFF01000074.1| 29022 30245 3 + 1224 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.233 CDS gi|543384347|gb|AVFF01000074.1| 30482 32899 2 + 2418 hypothetical protein - none -
fig|6666666.67480.peg.234 CDS gi|543384347|gb|AVFF01000074.1| 32967 33665 3 + 699 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67480.peg.235 CDS gi|543384347|gb|AVFF01000074.1| 34653 33715 -3 - 939 Putative secreted protease - none -
fig|6666666.67480.peg.236 CDS gi|543384347|gb|AVFF01000074.1| 34681 35580 1 + 900 GTP pyrophosphokinase (EC 2.7.6.5) - none -
fig|6666666.67480.peg.237 CDS gi|543384347|gb|AVFF01000074.1| 35604 35804 3 + 201 hypothetical protein - none -
fig|6666666.67480.peg.238 CDS gi|543384347|gb|AVFF01000074.1| 35950 37248 1 + 1299 serine protease - none -
fig|6666666.67480.peg.239 CDS gi|543384347|gb|AVFF01000074.1| 37492 37250 -1 - 243 hypothetical protein - none -
fig|6666666.67480.peg.240 CDS gi|543384347|gb|AVFF01000074.1| 38982 37891 -3 - 1092 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4) Acetoin, butanediol metabolism
fig|6666666.67480.peg.241 CDS gi|543384347|gb|AVFF01000074.1| 39189 39506 3 + 318 hypothetical protein - none -
fig|6666666.67480.peg.242 CDS gi|543384347|gb|AVFF01000074.1| 40058 39549 -2 - 510 FIG00545085: hypothetical protein - none -
fig|6666666.67480.peg.243 CDS gi|543384347|gb|AVFF01000074.1| 42368 40146 -2 - 2223 FIG00549204: hypothetical protein - none -
fig|6666666.67480.peg.244 CDS gi|543384347|gb|AVFF01000074.1| 44842 42365 -1 - 2478 Phage infection protein - none -
fig|6666666.67480.peg.245 CDS gi|543384347|gb|AVFF01000074.1| 46233 45109 -3 - 1125 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67480.peg.246 CDS gi|543384347|gb|AVFF01000074.1| 46763 46287 -2 - 477 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.67480.peg.247 CDS gi|543384347|gb|AVFF01000074.1| 46858 47997 1 + 1140 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.67480.peg.248 CDS gi|543384347|gb|AVFF01000074.1| 48154 48918 1 + 765 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.67480.peg.249 CDS gi|543384347|gb|AVFF01000074.1| 48948 49829 3 + 882 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.67480.peg.250 CDS gi|543384347|gb|AVFF01000074.1| 49903 50151 1 + 249 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.67480.peg.251 CDS gi|543384347|gb|AVFF01000074.1| 51209 50148 -2 - 1062 hypothetical protein - none -
fig|6666666.67480.peg.252 CDS gi|543384347|gb|AVFF01000074.1| 51238 52302 1 + 1065 Alcohol dehydrogenase (EC 1.1.1.1) Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.253 CDS gi|543384347|gb|AVFF01000074.1| 53963 52836 -2 - 1128 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67480.peg.254 CDS gi|543384347|gb|AVFF01000074.1| 54440 54568 2 + 129 hypothetical protein - none -
fig|6666666.67480.peg.255 CDS gi|543384347|gb|AVFF01000074.1| 54627 55964 3 + 1338 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.256 CDS gi|543384347|gb|AVFF01000074.1| 55987 56925 1 + 939 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) CBSS-316057.3.peg.3521
fig|6666666.67480.peg.257 CDS gi|543384347|gb|AVFF01000074.1| 56993 59209 2 + 2217 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) CBSS-316057.3.peg.3521
fig|6666666.67480.peg.258 CDS gi|543384347|gb|AVFF01000074.1| 61375 59894 -1 - 1482 FIG00545265: hypothetical protein - none -
fig|6666666.67480.peg.259 CDS gi|543384347|gb|AVFF01000074.1| 61402 62868 1 + 1467 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67480.peg.260 CDS gi|543384347|gb|AVFF01000074.1| 62959 63963 1 + 1005 No significant database matches - none -
fig|6666666.67480.peg.261 CDS gi|543384347|gb|AVFF01000074.1| 63982 64521 1 + 540 MutT/NUDIX family protein - none -
fig|6666666.67480.peg.262 CDS gi|543384347|gb|AVFF01000074.1| 64670 65446 2 + 777 putative secreted hydrolase - none -
fig|6666666.67480.peg.263 CDS gi|543384347|gb|AVFF01000074.1| 65609 65731 2 + 123 hypothetical protein - none -
fig|6666666.67480.peg.264 CDS gi|543384347|gb|AVFF01000074.1| 65704 66069 1 + 366 FIG00543905: hypothetical protein - none -
fig|6666666.67480.peg.265 CDS gi|543384347|gb|AVFF01000074.1| 66854 66117 -2 - 738 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67480.peg.266 CDS gi|543384347|gb|AVFF01000074.1| 68094 67051 -3 - 1044 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67480.peg.267 CDS gi|543384347|gb|AVFF01000074.1| 68919 68149 -3 - 771 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67480.peg.268 CDS gi|543384347|gb|AVFF01000074.1| 70134 68956 -3 - 1179 Probable MFS-transporter - none -
fig|6666666.67480.peg.269 CDS gi|543384347|gb|AVFF01000074.1| 72623 70455 -2 - 2169 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67480.peg.270 CDS gi|543384347|gb|AVFF01000074.1| 72885 73142 3 + 258 Putative oxidoreductase - none -
fig|6666666.67480.peg.271 CDS gi|543384347|gb|AVFF01000074.1| 74689 73139 -1 - 1551 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67480.peg.272 CDS gi|543384347|gb|AVFF01000074.1| 74839 75927 1 + 1089 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67480.peg.273 CDS gi|543384347|gb|AVFF01000074.1| 77058 75931 -3 - 1128 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.67480.peg.274 CDS gi|543384347|gb|AVFF01000074.1| 77870 77115 -2 - 756 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67480.peg.275 CDS gi|543384347|gb|AVFF01000074.1| 78066 78410 3 + 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67480.peg.276 CDS gi|543384347|gb|AVFF01000074.1| 80478 78556 -3 - 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67480.peg.277 CDS gi|543384347|gb|AVFF01000074.1| 80902 81993 1 + 1092 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67480.peg.278 CDS gi|543384347|gb|AVFF01000074.1| 82014 82445 3 + 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67480.peg.279 CDS gi|543384347|gb|AVFF01000074.1| 83007 83594 3 + 588 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67480.peg.280 CDS gi|543384347|gb|AVFF01000074.1| 83662 84552 1 + 891 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67480.peg.281 CDS gi|543384347|gb|AVFF01000074.1| 84598 85773 1 + 1176 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67480.peg.282 CDS gi|543384347|gb|AVFF01000074.1| 85773 87398 3 + 1626 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67480.peg.283 CDS gi|543384347|gb|AVFF01000074.1| 88099 88692 1 + 594 putative secreted protein - none -
fig|6666666.67480.peg.284 CDS gi|543384347|gb|AVFF01000074.1| 88783 89820 1 + 1038 putative secreted protein - none -
fig|6666666.67480.peg.285 CDS gi|543384347|gb|AVFF01000074.1| 89975 90952 2 + 978 ROK family protein (putative glucokinase) - none -
fig|6666666.67480.peg.286 CDS gi|543384347|gb|AVFF01000074.1| 90993 91757 3 + 765 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.287 CDS gi|543384347|gb|AVFF01000074.1| 91771 92868 1 + 1098 hypothetical protein - none -
fig|6666666.67480.peg.288 CDS gi|543384347|gb|AVFF01000074.1| 92914 93069 1 + 156 hypothetical protein - none -
fig|6666666.67480.peg.289 CDS gi|543384347|gb|AVFF01000074.1| 93113 93628 2 + 516 hypothetical protein - none -
fig|6666666.67480.peg.290 CDS gi|543384347|gb|AVFF01000074.1| 93661 95049 1 + 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67480.peg.291 CDS gi|543384347|gb|AVFF01000074.1| 96423 95215 -3 - 1209 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67480.peg.292 CDS gi|543384347|gb|AVFF01000074.1| 96700 97080 1 + 381 Conserved hypothetical regulatory protein - none -
fig|6666666.67480.peg.293 CDS gi|543384347|gb|AVFF01000074.1| 98609 97077 -2 - 1533 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67480.peg.294 CDS gi|543384347|gb|AVFF01000074.1| 99721 98609 -1 - 1113 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.67480.peg.295 CDS gi|543384347|gb|AVFF01000074.1| 100339 99770 -1 - 570 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67480.peg.296 CDS gi|543384347|gb|AVFF01000074.1| 100462 100587 1 + 126 hypothetical protein - none -
fig|6666666.67480.peg.297 CDS gi|543384347|gb|AVFF01000074.1| 100556 100996 2 + 441 hypothetical protein - none -
fig|6666666.67480.peg.298 CDS gi|543384347|gb|AVFF01000074.1| 101197 101652 1 + 456 FIG017342: transmembrane protein - none -
fig|6666666.67480.peg.299 CDS gi|543384347|gb|AVFF01000074.1| 101920 102054 1 + 135 hypothetical protein - none -
fig|6666666.67480.peg.300 CDS gi|543384347|gb|AVFF01000074.1| 102115 102549 1 + 435 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67480.peg.301 CDS gi|543384347|gb|AVFF01000074.1| 102694 103872 1 + 1179 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67480.peg.302 CDS gi|543384347|gb|AVFF01000074.1| 103875 104204 3 + 330 hypothetical protein - none -
fig|6666666.67480.peg.303 CDS gi|543384347|gb|AVFF01000074.1| 104168 104854 2 + 687 FIG00544004: hypothetical protein - none -
fig|6666666.67480.peg.304 CDS gi|543384347|gb|AVFF01000074.1| 104955 106868 3 + 1914 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.305 CDS gi|543384347|gb|AVFF01000074.1| 106990 108576 1 + 1587 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67480.peg.306 CDS gi|543384347|gb|AVFF01000074.1| 108610 110100 1 + 1491 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67480.peg.307 CDS gi|543384347|gb|AVFF01000074.1| 110175 111272 3 + 1098 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67480.peg.308 CDS gi|543384347|gb|AVFF01000074.1| 111280 112797 1 + 1518 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67480.peg.309 CDS gi|543384347|gb|AVFF01000074.1| 112800 113069 3 + 270 hypothetical protein - none -
fig|6666666.67480.peg.310 CDS gi|543384347|gb|AVFF01000074.1| 113066 114343 2 + 1278 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67480.peg.311 CDS gi|543384347|gb|AVFF01000074.1| 114316 115458 1 + 1143 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67480.peg.312 CDS gi|543384347|gb|AVFF01000074.1| 115483 117087 1 + 1605 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67480.peg.313 CDS gi|543384347|gb|AVFF01000074.1| 117360 117746 3 + 387 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.314 CDS gi|543384347|gb|AVFF01000074.1| 117948 119198 3 + 1251 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.315 CDS gi|543384347|gb|AVFF01000074.1| 119208 119837 3 + 630 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.316 CDS gi|543384347|gb|AVFF01000074.1| 119849 119977 2 + 129 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.317 CDS gi|543384347|gb|AVFF01000074.1| 119991 120797 3 + 807 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.318 CDS gi|543384347|gb|AVFF01000074.1| 120863 121435 2 + 573 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.319 CDS gi|543384347|gb|AVFF01000074.1| 121548 121760 3 + 213 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.320 CDS gi|543384347|gb|AVFF01000074.1| 121967 123043 2 + 1077 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67480.peg.321 CDS gi|543384347|gb|AVFF01000074.1| 123986 123351 -2 - 636 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.67480.peg.322 CDS gi|543384347|gb|AVFF01000074.1| 124618 123986 -1 - 633 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.67480.peg.323 CDS gi|543384717|gb|AVFF01000063.1| 20 553 2 + 534 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67480.peg.324 CDS gi|543384717|gb|AVFF01000063.1| 592 1221 1 + 630 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67480.peg.325 CDS gi|543384717|gb|AVFF01000063.1| 1557 2228 3 + 672 Two-component system, regulatory protein - none -
fig|6666666.67480.peg.326 CDS gi|543384717|gb|AVFF01000063.1| 4719 2296 -3 - 2424 hypothetical protein - none -
fig|6666666.67480.peg.327 CDS gi|543384717|gb|AVFF01000063.1| 4898 6232 2 + 1335 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67480.peg.328 CDS gi|543384717|gb|AVFF01000063.1| 7104 6373 -3 - 732 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.329 CDS gi|543384717|gb|AVFF01000063.1| 7869 7144 -3 - 726 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67480.peg.330 CDS gi|543384717|gb|AVFF01000063.1| 7871 7993 2 + 123 hypothetical protein - none -
fig|6666666.67480.peg.331 CDS gi|543384717|gb|AVFF01000063.1| 8820 7990 -3 - 831 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.67480.peg.332 CDS gi|543384717|gb|AVFF01000063.1| 8925 11672 3 + 2748 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67480.peg.333 CDS gi|543384717|gb|AVFF01000063.1| 11672 12757 2 + 1086 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67480.peg.334 CDS gi|543384717|gb|AVFF01000063.1| 12721 13269 1 + 549 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67480.peg.335 CDS gi|543384717|gb|AVFF01000063.1| 13266 13808 3 + 543 Putative membrane protein - none -
fig|6666666.67480.peg.336 CDS gi|543384717|gb|AVFF01000063.1| 13902 14312 3 + 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.67480.peg.337 CDS gi|543384717|gb|AVFF01000063.1| 15640 16065 1 + 426 hypothetical protein - none -
fig|6666666.67480.peg.338 CDS gi|543384717|gb|AVFF01000063.1| 16055 16777 2 + 723 hypothetical protein - none -
fig|6666666.67480.peg.339 CDS gi|543384717|gb|AVFF01000063.1| 16734 18803 3 + 2070 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.67480.peg.340 CDS gi|543384717|gb|AVFF01000063.1| 19057 19269 1 + 213 hypothetical protein - none -
fig|6666666.67480.peg.341 CDS gi|543384717|gb|AVFF01000063.1| 19512 19817 3 + 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67480.peg.342 CDS gi|543384717|gb|AVFF01000063.1| 19927 20115 1 + 189 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67480.peg.343 CDS gi|543384717|gb|AVFF01000063.1| 20247 21776 3 + 1530 COG0536: GTP-binding protein Obg - none -
fig|6666666.67480.peg.344 CDS gi|543384717|gb|AVFF01000063.1| 21833 23071 2 + 1239 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.67480.peg.345 CDS gi|543384717|gb|AVFF01000063.1| 23158 24054 1 + 897 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67480.peg.346 CDS gi|543384717|gb|AVFF01000063.1| 24150 25451 3 + 1302 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67480.peg.347 CDS gi|543384717|gb|AVFF01000063.1| 25616 26134 2 + 519 hypothetical protein - none -
fig|6666666.67480.peg.348 CDS gi|543384717|gb|AVFF01000063.1| 26166 26771 3 + 606 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67480.peg.349 CDS gi|543384717|gb|AVFF01000063.1| 26969 27427 2 + 459 Iojap protein - none -
fig|6666666.67480.peg.350 CDS gi|543384717|gb|AVFF01000063.1| 27424 28101 1 + 678 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67480.peg.351 CDS gi|543384717|gb|AVFF01000063.1| 28364 28912 2 + 549 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67480.peg.352 CDS gi|543384717|gb|AVFF01000063.1| 29029 29928 1 + 900 Late competence protein ComEA, DNA receptor - none -
fig|6666666.67480.peg.353 CDS gi|543384717|gb|AVFF01000063.1| 29936 31666 2 + 1731 ComEC/Rec2-related protein - none -
fig|6666666.67480.peg.354 CDS gi|543384717|gb|AVFF01000063.1| 31692 32642 3 + 951 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67480.peg.355 CDS gi|543384717|gb|AVFF01000063.1| 32655 33086 3 + 432 ankyrin repeat containing protein - none -
fig|6666666.67480.peg.356 CDS gi|543384717|gb|AVFF01000063.1| 33083 33733 2 + 651 Threonine efflux protein - none -
fig|6666666.67480.peg.357 CDS gi|543384717|gb|AVFF01000063.1| 34243 34374 1 + 132 hypothetical protein - none -
fig|6666666.67480.peg.358 CDS gi|543384717|gb|AVFF01000063.1| 34811 34677 -2 - 135 hypothetical protein - none -
fig|6666666.67480.peg.359 CDS gi|543384717|gb|AVFF01000063.1| 35292 35128 -3 - 165 hypothetical protein - none -
fig|6666666.67480.peg.360 CDS gi|543384717|gb|AVFF01000063.1| 35855 35589 -2 - 267 SSU ribosomal protein S20p - none -
fig|6666666.67480.peg.361 CDS gi|543384717|gb|AVFF01000063.1| 36663 36127 -3 - 537 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67480.peg.362 CDS gi|543384717|gb|AVFF01000063.1| 36768 38615 3 + 1848 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.67480.peg.363 CDS gi|543384717|gb|AVFF01000063.1| 38826 40292 3 + 1467 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.364 CDS gi|543384717|gb|AVFF01000063.1| 40308 40478 3 + 171 hypothetical protein - none -
fig|6666666.67480.peg.365 CDS gi|543384717|gb|AVFF01000063.1| 40576 41457 1 + 882 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.67480.peg.366 CDS gi|543384717|gb|AVFF01000063.1| 42202 41558 -1 - 645 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.367 CDS gi|543384717|gb|AVFF01000063.1| 42370 43545 1 + 1176 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.67480.peg.368 CDS gi|543384717|gb|AVFF01000063.1| 44542 43649 -1 - 894 Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67480.peg.369 CDS gi|543384717|gb|AVFF01000063.1| 45941 44526 -2 - 1416 Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67480.peg.370 CDS gi|543384717|gb|AVFF01000063.1| 47122 45944 -1 - 1179 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Biotin synthesis cluster;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67480.peg.371 CDS gi|543384717|gb|AVFF01000063.1| 47973 47251 -3 - 723 hypothetical protein - none -
fig|6666666.67480.peg.372 CDS gi|543384717|gb|AVFF01000063.1| 49557 48064 -3 - 1494 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67480.peg.373 CDS gi|543384717|gb|AVFF01000063.1| 49758 50615 3 + 858 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67480.peg.374 CDS gi|543384717|gb|AVFF01000063.1| 50811 51635 3 + 825 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67480.peg.375 CDS gi|543384717|gb|AVFF01000063.1| 51619 51882 1 + 264 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67480.peg.376 CDS gi|543384717|gb|AVFF01000063.1| 52193 52489 2 + 297 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67480.peg.377 CDS gi|543384717|gb|AVFF01000063.1| 53002 52529 -1 - 474 FIG00544777: hypothetical protein - none -
fig|6666666.67480.peg.378 CDS gi|543384717|gb|AVFF01000063.1| 53293 53892 1 + 600 hypothetical protein - none -
fig|6666666.67480.peg.379 CDS gi|543384717|gb|AVFF01000063.1| 53935 55326 1 + 1392 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67480.peg.380 CDS gi|543384717|gb|AVFF01000063.1| 55435 56604 1 + 1170 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67480.peg.381 CDS gi|543384717|gb|AVFF01000063.1| 56558 56701 2 + 144 hypothetical protein - none -
fig|6666666.67480.peg.382 CDS gi|543384717|gb|AVFF01000063.1| 57808 56783 -1 - 1026 cell wall surface anchor family protein - none -
fig|6666666.67480.peg.383 CDS gi|543384717|gb|AVFF01000063.1| 58140 58544 3 + 405 hypothetical protein - none -
fig|6666666.67480.peg.384 CDS gi|543384717|gb|AVFF01000063.1| 58544 59185 2 + 642 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.67480.peg.385 CDS gi|543384717|gb|AVFF01000063.1| 59215 59919 1 + 705 DNA-binding response regulator mtrA - none -
fig|6666666.67480.peg.386 CDS gi|543384717|gb|AVFF01000063.1| 59932 61656 1 + 1725 Putative two component system sensor kinase - none -
fig|6666666.67480.peg.387 CDS gi|543384717|gb|AVFF01000063.1| 61646 63484 2 + 1839 LpqB - none -
fig|6666666.67480.peg.388 CDS gi|543384717|gb|AVFF01000063.1| 63509 64156 2 + 648 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.67480.peg.389 CDS gi|543384717|gb|AVFF01000063.1| 64303 64980 1 + 678 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67480.peg.390 CDS gi|543384717|gb|AVFF01000063.1| 65154 67748 3 + 2595 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67480.peg.391 CDS gi|543384717|gb|AVFF01000063.1| 68170 67745 -1 - 426 hypothetical protein - none -
fig|6666666.67480.peg.392 CDS gi|543384717|gb|AVFF01000063.1| 68321 68731 2 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.67480.peg.393 CDS gi|543384717|gb|AVFF01000063.1| 68733 69239 3 + 507 hypothetical protein - none -
fig|6666666.67480.peg.394 CDS gi|543384717|gb|AVFF01000063.1| 70165 69236 -1 - 930 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.67480.peg.395 CDS gi|543384717|gb|AVFF01000063.1| 71209 70271 -1 - 939 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67480.peg.396 CDS gi|543384717|gb|AVFF01000063.1| 71623 72360 1 + 738 RNA polymerase sigma-E factor - none -
fig|6666666.67480.peg.397 CDS gi|543384717|gb|AVFF01000063.1| 72360 72794 3 + 435 hypothetical protein - none -
fig|6666666.67480.peg.398 CDS gi|543384717|gb|AVFF01000063.1| 73442 73182 -2 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67480.peg.399 CDS gi|543384717|gb|AVFF01000063.1| 73520 73636 2 + 117 hypothetical protein - none -
fig|6666666.67480.peg.400 CDS gi|543384717|gb|AVFF01000063.1| 73823 74323 2 + 501 FIG00543921: hypothetical protein - none -
fig|6666666.67480.peg.401 CDS gi|543384717|gb|AVFF01000063.1| 75791 74505 -2 - 1287 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67480.peg.402 CDS gi|543384717|gb|AVFF01000063.1| 77158 75809 -1 - 1350 putative ATP-dependent RNA helicase - none -
fig|6666666.67480.peg.403 CDS gi|543384717|gb|AVFF01000063.1| 77242 77469 1 + 228 putative ATP-binding protein - none -
fig|6666666.67480.peg.404 CDS gi|543384717|gb|AVFF01000063.1| 77607 78575 3 + 969 FIG00544386: hypothetical protein - none -
fig|6666666.67480.peg.405 CDS gi|543384717|gb|AVFF01000063.1| 78647 79339 2 + 693 FIG00544868: hypothetical protein - none -
fig|6666666.67480.peg.406 CDS gi|543384717|gb|AVFF01000063.1| 79484 82528 2 + 3045 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67480.peg.407 CDS gi|543384717|gb|AVFF01000063.1| 82521 85955 3 + 3435 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67480.peg.408 CDS gi|543384717|gb|AVFF01000063.1| 85965 87206 3 + 1242 Potassium channel protein Potassium homeostasis
fig|6666666.67480.peg.409 CDS gi|543384717|gb|AVFF01000063.1| 87218 89266 2 + 2049 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67480.peg.410 CDS gi|543384717|gb|AVFF01000063.1| 90500 90222 -2 - 279 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67480.peg.411 CDS gi|543384717|gb|AVFF01000063.1| 91536 90577 -3 - 960 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67480.peg.412 CDS gi|543384717|gb|AVFF01000063.1| 91729 92841 1 + 1113 Lon-like protease with PDZ domain CBSS-269801.1.peg.1715
fig|6666666.67480.peg.413 CDS gi|543384717|gb|AVFF01000063.1| 93197 92868 -2 - 330 No significant database matches - none -
fig|6666666.67480.peg.414 CDS gi|543384717|gb|AVFF01000063.1| 93298 93657 1 + 360 hypothetical protein - none -
fig|6666666.67480.peg.415 CDS gi|543384717|gb|AVFF01000063.1| 94268 93669 -2 - 600 FIG129854: hypothetical protein - none -
fig|6666666.67480.peg.416 CDS gi|543384717|gb|AVFF01000063.1| 94474 97419 1 + 2946 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67480.peg.417 CDS gi|543384717|gb|AVFF01000063.1| 98164 98433 1 + 270 hypothetical protein - none -
fig|6666666.67480.peg.418 CDS gi|543384717|gb|AVFF01000063.1| 98512 98676 1 + 165 hypothetical protein - none -
fig|6666666.67480.peg.419 CDS gi|543384717|gb|AVFF01000063.1| 98859 100217 3 + 1359 Predicted histidine uptake transporter - none -
fig|6666666.67480.peg.420 CDS gi|543384717|gb|AVFF01000063.1| 100240 100986 1 + 747 Transcriptional regulator, IclR family - none -
fig|6666666.67480.peg.421 CDS gi|543384717|gb|AVFF01000063.1| 101111 102790 2 + 1680 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.67480.peg.422 CDS gi|543384717|gb|AVFF01000063.1| 103318 102833 -1 - 486 FIG016027: protein of unknown function YeaO - none -
fig|6666666.67480.peg.423 CDS gi|543384717|gb|AVFF01000063.1| 103339 104223 1 + 885 hypothetical protein - none -
fig|6666666.67480.peg.424 CDS gi|543384717|gb|AVFF01000063.1| 104223 104792 3 + 570 Conserved integral membrane protein - none -
fig|6666666.67480.peg.425 CDS gi|543384717|gb|AVFF01000063.1| 105122 106324 2 + 1203 No significant database matches - none -
fig|6666666.67480.peg.426 CDS gi|543384717|gb|AVFF01000063.1| 107224 106400 -1 - 825 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67480.peg.427 CDS gi|543384717|gb|AVFF01000063.1| 108125 107217 -2 - 909 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67480.peg.428 CDS gi|543384717|gb|AVFF01000063.1| 108149 108268 2 + 120 hypothetical protein - none -
fig|6666666.67480.peg.429 CDS gi|543384717|gb|AVFF01000063.1| 108318 109463 3 + 1146 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67480.peg.430 CDS gi|543384717|gb|AVFF01000063.1| 111160 109460 -1 - 1701 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.67480.peg.431 CDS gi|543384717|gb|AVFF01000063.1| 111312 112010 3 + 699 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67480.peg.432 CDS gi|543384717|gb|AVFF01000063.1| 112055 112957 2 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67480.peg.433 CDS gi|543384717|gb|AVFF01000063.1| 112980 113489 3 + 510 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67480.peg.434 CDS gi|543384717|gb|AVFF01000063.1| 113568 115574 3 + 2007 Lipopolysaccharide modification acyltransferase - none -
fig|6666666.67480.peg.435 CDS gi|543384717|gb|AVFF01000063.1| 116446 115661 -1 - 786 membrane associated protein - none -
fig|6666666.67480.peg.436 CDS gi|543384717|gb|AVFF01000063.1| 117254 117502 2 + 249 hypothetical protein - none -
fig|6666666.67480.peg.437 CDS gi|543384717|gb|AVFF01000063.1| 117591 117911 3 + 321 hypothetical protein - none -
fig|6666666.67480.peg.438 CDS gi|543384717|gb|AVFF01000063.1| 118030 117908 -1 - 123 hypothetical protein - none -
fig|6666666.67480.peg.439 CDS gi|543384717|gb|AVFF01000063.1| 118041 119048 3 + 1008 hypothetical protein - none -
fig|6666666.67480.peg.440 CDS gi|543384717|gb|AVFF01000063.1| 120548 119058 -2 - 1491 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67480.peg.441 CDS gi|543384717|gb|AVFF01000063.1| 120733 121176 1 + 444 putative membrane protein. - none -
fig|6666666.67480.peg.442 CDS gi|543384717|gb|AVFF01000063.1| 121404 122453 3 + 1050 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.67480.peg.443 CDS gi|543384717|gb|AVFF01000063.1| 122602 123660 1 + 1059 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.67480.peg.444 CDS gi|543384717|gb|AVFF01000063.1| 123653 124804 2 + 1152 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.67480.peg.445 CDS gi|543384717|gb|AVFF01000063.1| 124801 125556 1 + 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.67480.peg.446 CDS gi|543384717|gb|AVFF01000063.1| 125843 126010 2 + 168 hypothetical protein - none -
fig|6666666.67480.peg.447 CDS gi|543384717|gb|AVFF01000063.1| 125965 126600 1 + 636 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67480.peg.448 CDS gi|543384853|gb|AVFF01000062.1| 749 207 -2 - 543 Mobile element protein - none -
fig|6666666.67480.peg.449 CDS gi|543384853|gb|AVFF01000062.1| 2216 2629 2 + 414 Bicyclomycin resistance protein - none -
fig|6666666.67480.peg.450 CDS gi|543384853|gb|AVFF01000062.1| 2653 2871 1 + 219 Mobile element protein - none -
fig|6666666.67480.peg.451 CDS gi|543384867|gb|AVFF01000061.1| 221 1582 2 + 1362 Putative integral membrane protein - none -
fig|6666666.67480.peg.452 CDS gi|543384867|gb|AVFF01000061.1| 1586 3070 2 + 1485 FIG00547077: hypothetical protein - none -
fig|6666666.67480.peg.453 CDS gi|543385111|gb|AVFF01000054.1| 15 959 3 + 945 Putative glycosyl transferase - none -
fig|6666666.67480.peg.454 CDS gi|543385111|gb|AVFF01000054.1| 1572 1036 -3 - 537 hypothetical protein - none -
fig|6666666.67480.peg.455 CDS gi|543385111|gb|AVFF01000054.1| 2085 1609 -3 - 477 FIG00544442: hypothetical protein - none -
fig|6666666.67480.peg.456 CDS gi|543385111|gb|AVFF01000054.1| 3017 2160 -2 - 858 FIG00545361: hypothetical protein - none -
fig|6666666.67480.peg.457 CDS gi|543385111|gb|AVFF01000054.1| 3084 3332 3 + 249 FIG00543901: hypothetical protein - none -
fig|6666666.67480.peg.458 CDS gi|543385158|gb|AVFF01000052.1| 247 1185 1 + 939 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.67480.peg.459 CDS gi|543385158|gb|AVFF01000052.1| 1781 1509 -2 - 273 hypothetical protein - none -
fig|6666666.67480.peg.460 CDS gi|543385158|gb|AVFF01000052.1| 1808 2881 2 + 1074 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.67480.peg.461 CDS gi|543385158|gb|AVFF01000052.1| 3896 2892 -2 - 1005 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67480.peg.462 CDS gi|543385158|gb|AVFF01000052.1| 3915 4046 3 + 132 hypothetical protein - none -
fig|6666666.67480.peg.463 CDS gi|543385158|gb|AVFF01000052.1| 4276 5172 1 + 897 Universal stress protein family - none -
fig|6666666.67480.peg.464 CDS gi|543385158|gb|AVFF01000052.1| 5176 5433 1 + 258 hypothetical protein - none -
fig|6666666.67480.peg.465 CDS gi|543385158|gb|AVFF01000052.1| 5623 6249 1 + 627 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.466 CDS gi|543385158|gb|AVFF01000052.1| 7509 6337 -3 - 1173 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.67480.peg.467 CDS gi|543385158|gb|AVFF01000052.1| 7619 8941 2 + 1323 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.468 CDS gi|543385158|gb|AVFF01000052.1| 8986 9633 1 + 648 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.469 CDS gi|543385158|gb|AVFF01000052.1| 10278 9643 -3 - 636 FIG071084: hypothetical protein - none -
fig|6666666.67480.peg.470 CDS gi|543385158|gb|AVFF01000052.1| 10365 12023 3 + 1659 FIG00544355: hypothetical protein - none -
fig|6666666.67480.peg.471 CDS gi|543385158|gb|AVFF01000052.1| 13228 12020 -1 - 1209 putative transport protein - none -
fig|6666666.67480.peg.472 CDS gi|543385158|gb|AVFF01000052.1| 13712 13506 -2 - 207 hypothetical protein - none -
fig|6666666.67480.peg.473 CDS gi|543385158|gb|AVFF01000052.1| 13939 14052 1 + 114 hypothetical protein - none -
fig|6666666.67480.peg.474 CDS gi|543385158|gb|AVFF01000052.1| 14348 14154 -2 - 195 hypothetical protein - none -
fig|6666666.67480.peg.475 CDS gi|543385158|gb|AVFF01000052.1| 14893 14420 -1 - 474 ABC transporter, ATP-binding protein - none -
fig|6666666.67480.peg.476 CDS gi|543385158|gb|AVFF01000052.1| 16274 14904 -2 - 1371 hypothetical protein - none -
fig|6666666.67480.peg.477 CDS gi|543385158|gb|AVFF01000052.1| 16880 17191 2 + 312 Mobile element protein - none -
fig|6666666.67480.peg.478 CDS gi|543385158|gb|AVFF01000052.1| 17682 17861 3 + 180 Mobile element protein - none -
fig|6666666.67480.peg.479 CDS gi|543385158|gb|AVFF01000052.1| 17925 17812 -3 - 114 hypothetical protein - none -
fig|6666666.67480.peg.480 CDS gi|543385158|gb|AVFF01000052.1| 18084 18485 3 + 402 hypothetical protein - none -
fig|6666666.67480.peg.481 CDS gi|543385158|gb|AVFF01000052.1| 19231 18629 -1 - 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67480.peg.482 CDS gi|543385158|gb|AVFF01000052.1| 19419 20081 3 + 663 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67480.peg.483 CDS gi|543385158|gb|AVFF01000052.1| 20127 20852 3 + 726 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67480.peg.484 CDS gi|543385158|gb|AVFF01000052.1| 21002 22000 2 + 999 Putative DNA-binding protein in cluster with Type I restriction-modification system - none -
fig|6666666.67480.peg.485 CDS gi|543385158|gb|AVFF01000052.1| 22081 23001 1 + 921 FIG00544431: hypothetical protein - none -
fig|6666666.67480.peg.486 CDS gi|543385158|gb|AVFF01000052.1| 23175 24209 3 + 1035 NAD(P)H-dependent 2-cyclohexen-1-one reductase - none -
fig|6666666.67480.peg.487 CDS gi|543385158|gb|AVFF01000052.1| 25555 24257 -1 - 1299 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67480.peg.488 CDS gi|543385158|gb|AVFF01000052.1| 25598 26167 2 + 570 hypothetical protein - none -
fig|6666666.67480.peg.489 CDS gi|543385158|gb|AVFF01000052.1| 27292 26168 -1 - 1125 putative amidase - none -
fig|6666666.67480.peg.490 CDS gi|543385158|gb|AVFF01000052.1| 27269 28240 2 + 972 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67480.peg.491 CDS gi|543385158|gb|AVFF01000052.1| 28243 28896 1 + 654 putative phosphoglycerate mutase - none -
fig|6666666.67480.peg.492 CDS gi|543385158|gb|AVFF01000052.1| 29290 28943 -1 - 348 FIG00544953: hypothetical protein - none -
fig|6666666.67480.peg.493 CDS gi|543385158|gb|AVFF01000052.1| 30336 29350 -3 - 987 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67480.peg.494 CDS gi|543385158|gb|AVFF01000052.1| 30324 31667 3 + 1344 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67480.peg.495 CDS gi|543385158|gb|AVFF01000052.1| 31664 32560 2 + 897 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.496 CDS gi|543385158|gb|AVFF01000052.1| 32557 33411 1 + 855 Cof family hydrolase - none -
fig|6666666.67480.peg.497 CDS gi|543385158|gb|AVFF01000052.1| 33419 34984 2 + 1566 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.498 CDS gi|543385158|gb|AVFF01000052.1| 37131 34981 -3 - 2151 putative secreted protein - none -
fig|6666666.67480.peg.499 CDS gi|543385158|gb|AVFF01000052.1| 37348 38538 1 + 1191 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67480.peg.500 CDS gi|543385158|gb|AVFF01000052.1| 38633 40567 2 + 1935 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67480.peg.501 CDS gi|543385158|gb|AVFF01000052.1| 40557 41087 3 + 531 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67480.peg.502 CDS gi|543385158|gb|AVFF01000052.1| 41088 42071 3 + 984 putative membrane protein - none -
fig|6666666.67480.peg.503 CDS gi|543385158|gb|AVFF01000052.1| 42277 43299 1 + 1023 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67480.peg.504 CDS gi|543385158|gb|AVFF01000052.1| 43627 45624 1 + 1998 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67480.peg.505 CDS gi|543385158|gb|AVFF01000052.1| 45702 46250 3 + 549 Putative exported protein - none -
fig|6666666.67480.peg.506 CDS gi|543385158|gb|AVFF01000052.1| 46316 47227 2 + 912 hypothetical protein Rv3802c - none -
fig|6666666.67480.peg.507 CDS gi|543385158|gb|AVFF01000052.1| 47500 49344 1 + 1845 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.508 CDS gi|543385158|gb|AVFF01000052.1| 49345 54390 1 + 5046 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67480.peg.509 CDS gi|543385158|gb|AVFF01000052.1| 54391 55935 1 + 1545 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67480.peg.510 CDS gi|543385158|gb|AVFF01000052.1| 56095 55928 -1 - 168 hypothetical protein - none -
fig|6666666.67480.peg.511 CDS gi|543385158|gb|AVFF01000052.1| 57420 57617 3 + 198 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Thiamin biosynthesis
fig|6666666.67480.peg.512 CDS gi|543385158|gb|AVFF01000052.1| 57822 57935 3 + 114 hypothetical protein - none -
fig|6666666.67480.peg.513 CDS gi|543385158|gb|AVFF01000052.1| 58661 58813 2 + 153 Mobile element protein - none -
fig|6666666.67480.peg.514 CDS gi|543385158|gb|AVFF01000052.1| 59401 59811 1 + 411 Mobile element protein - none -
fig|6666666.67480.peg.515 CDS gi|543385158|gb|AVFF01000052.1| 60644 61612 2 + 969 Protein rarD - none -
fig|6666666.67480.peg.516 CDS gi|543385158|gb|AVFF01000052.1| 62967 61930 -3 - 1038 hypothetical protein - none -
fig|6666666.67480.peg.517 CDS gi|543385158|gb|AVFF01000052.1| 65355 62980 -3 - 2376 putative integral membrane protein - none -
fig|6666666.67480.peg.518 CDS gi|543385158|gb|AVFF01000052.1| 66023 65364 -2 - 660 FIG00546304: hypothetical protein - none -
fig|6666666.67480.peg.519 CDS gi|543385158|gb|AVFF01000052.1| 66952 66155 -1 - 798 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67480.peg.520 CDS gi|543385158|gb|AVFF01000052.1| 67218 69050 3 + 1833 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67480.peg.521 CDS gi|543385158|gb|AVFF01000052.1| 69199 69083 -1 - 117 hypothetical protein - none -
fig|6666666.67480.peg.522 CDS gi|543385158|gb|AVFF01000052.1| 69289 69636 1 + 348 hypothetical protein - none -
fig|6666666.67480.peg.523 CDS gi|543385158|gb|AVFF01000052.1| 69842 70279 2 + 438 hypothetical protein - none -
fig|6666666.67480.peg.524 CDS gi|543385158|gb|AVFF01000052.1| 71058 70285 -3 - 774 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67480.peg.525 CDS gi|543385158|gb|AVFF01000052.1| 71810 71998 2 + 189 hypothetical protein - none -
fig|6666666.67480.peg.526 CDS gi|543385158|gb|AVFF01000052.1| 72105 72458 3 + 354 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67480.peg.527 CDS gi|543385158|gb|AVFF01000052.1| 72433 73227 1 + 795 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67480.peg.528 CDS gi|543385158|gb|AVFF01000052.1| 73290 74204 3 + 915 siderophore-interacting protein - none -
fig|6666666.67480.peg.529 CDS gi|543385158|gb|AVFF01000052.1| 75955 74582 -1 - 1374 hypothetical protein - none -
fig|6666666.67480.peg.530 CDS gi|543385158|gb|AVFF01000052.1| 76692 76501 -3 - 192 hypothetical protein - none -
fig|6666666.67480.peg.531 CDS gi|543385158|gb|AVFF01000052.1| 76985 77116 2 + 132 hypothetical protein - none -
fig|6666666.67480.peg.532 CDS gi|543385158|gb|AVFF01000052.1| 77385 77140 -3 - 246 Glutamine amidotransferase, class I - none -
fig|6666666.67480.peg.533 CDS gi|543385158|gb|AVFF01000052.1| 77749 77366 -1 - 384 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67480.peg.534 CDS gi|543385158|gb|AVFF01000052.1| 78061 77816 -1 - 246 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67480.peg.535 CDS gi|543385158|gb|AVFF01000052.1| 79446 78238 -3 - 1209 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.67480.peg.536 CDS gi|543385158|gb|AVFF01000052.1| 79876 79466 -1 - 411 Nitrite-sensitive transcriptional repressor NsrR Nitrosative stress;
Oxidative stress
fig|6666666.67480.peg.537 CDS gi|543385158|gb|AVFF01000052.1| 80454 80645 3 + 192 Transposase - none -
fig|6666666.67480.peg.538 CDS gi|543385158|gb|AVFF01000052.1| 80798 80941 2 + 144 Mobile element protein - none -
fig|6666666.67480.peg.539 CDS gi|543385158|gb|AVFF01000052.1| 80923 81396 1 + 474 Mobile element protein - none -
fig|6666666.67480.peg.540 CDS gi|543385158|gb|AVFF01000052.1| 81596 81402 -2 - 195 hypothetical protein - none -
fig|6666666.67480.peg.541 CDS gi|543385158|gb|AVFF01000052.1| 82501 83691 1 + 1191 putative cyanate ABC transporter, substrate binding protein - none -
fig|6666666.67480.peg.542 CDS gi|543385158|gb|AVFF01000052.1| 84025 84600 1 + 576 Nitrate ABC transporter, permease protein Nitrate and nitrite ammonification
fig|6666666.67480.peg.543 CDS gi|543385158|gb|AVFF01000052.1| 84593 85423 2 + 831 Nitrate ABC transporter, ATP-binding protein Nitrate and nitrite ammonification
fig|6666666.67480.peg.544 CDS gi|543385158|gb|AVFF01000052.1| 85575 86498 3 + 924 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67480.peg.545 CDS gi|543385158|gb|AVFF01000052.1| 86498 86842 2 + 345 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67480.peg.546 CDS gi|543385158|gb|AVFF01000052.1| 86823 87401 3 + 579 hypothetical protein - none -
fig|6666666.67480.peg.547 CDS gi|543385158|gb|AVFF01000052.1| 87480 90257 3 + 2778 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67480.peg.548 CDS gi|543385158|gb|AVFF01000052.1| 90384 90722 3 + 339 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67480.peg.549 CDS gi|543385158|gb|AVFF01000052.1| 90723 91382 3 + 660 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67480.peg.550 CDS gi|543385158|gb|AVFF01000052.1| 92356 91439 -1 - 918 Iron utilization protein - none -
fig|6666666.67480.peg.551 CDS gi|543385158|gb|AVFF01000052.1| 93254 92406 -2 - 849 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67480.peg.552 CDS gi|543385158|gb|AVFF01000052.1| 94694 93258 -2 - 1437 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67480.peg.553 CDS gi|543385158|gb|AVFF01000052.1| 96154 94961 -1 - 1194 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.67480.peg.554 CDS gi|543385158|gb|AVFF01000052.1| 98094 96271 -3 - 1824 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67480.peg.555 CDS gi|543385158|gb|AVFF01000052.1| 98161 98295 1 + 135 hypothetical protein - none -
fig|6666666.67480.peg.556 CDS gi|543385158|gb|AVFF01000052.1| 98444 99709 2 + 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67480.peg.557 CDS gi|543385158|gb|AVFF01000052.1| 99754 100791 1 + 1038 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67480.peg.558 CDS gi|543385158|gb|AVFF01000052.1| 102208 100901 -1 - 1308 FIG00544530: hypothetical protein - none -
fig|6666666.67480.peg.559 CDS gi|543385158|gb|AVFF01000052.1| 102845 102297 -2 - 549 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.67480.peg.560 CDS gi|543385158|gb|AVFF01000052.1| 102997 104544 1 + 1548 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67480.peg.561 CDS gi|543385158|gb|AVFF01000052.1| 104869 106296 1 + 1428 Membrane protein - none -
fig|6666666.67480.peg.562 CDS gi|543385158|gb|AVFF01000052.1| 106671 106402 -3 - 270 hypothetical protein - none -
fig|6666666.67480.peg.563 CDS gi|543385158|gb|AVFF01000052.1| 106902 108257 3 + 1356 Phage tail fiber protein Phage tail fiber proteins
fig|6666666.67480.peg.564 CDS gi|543385158|gb|AVFF01000052.1| 109682 108780 -2 - 903 putative secreted protein - none -
fig|6666666.67480.peg.565 CDS gi|543385158|gb|AVFF01000052.1| 109735 110298 1 + 564 Transamidase GatB domain protein - none -
fig|6666666.67480.peg.566 CDS gi|543385158|gb|AVFF01000052.1| 112703 110295 -2 - 2409 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67480.peg.567 CDS gi|543385158|gb|AVFF01000052.1| 112857 113210 3 + 354 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67480.peg.568 CDS gi|543385158|gb|AVFF01000052.1| 113286 113441 3 + 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67480.peg.569 CDS gi|543385158|gb|AVFF01000052.1| 113443 113913 1 + 471 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67480.peg.570 CDS gi|543385158|gb|AVFF01000052.1| 114045 114818 3 + 774 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67480.peg.571 CDS gi|543385158|gb|AVFF01000052.1| 115689 115006 -3 - 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67480.peg.572 CDS gi|543385158|gb|AVFF01000052.1| 115919 115797 -2 - 123 hypothetical protein - none -
fig|6666666.67480.peg.573 CDS gi|543385158|gb|AVFF01000052.1| 116048 116731 2 + 684 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.67480.peg.574 CDS gi|543385158|gb|AVFF01000052.1| 116731 117480 1 + 750 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67480.peg.575 CDS gi|543385158|gb|AVFF01000052.1| 117516 118712 3 + 1197 putative serine protease - none -
fig|6666666.67480.peg.576 CDS gi|543385158|gb|AVFF01000052.1| 119722 118751 -1 - 972 putative hydrolase - none -
fig|6666666.67480.peg.577 CDS gi|543385158|gb|AVFF01000052.1| 120280 119777 -1 - 504 FIG00544230: hypothetical protein - none -
fig|6666666.67480.peg.578 CDS gi|543385158|gb|AVFF01000052.1| 121260 120277 -3 - 984 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67480.peg.579 CDS gi|543385158|gb|AVFF01000052.1| 121495 122745 1 + 1251 hypothetical protein - none -
fig|6666666.67480.peg.580 CDS gi|543385158|gb|AVFF01000052.1| 122843 124072 2 + 1230 Flp pilus assembly protein, ATPase CpaF - none -
fig|6666666.67480.peg.581 CDS gi|543385158|gb|AVFF01000052.1| 124069 124881 1 + 813 FIG016317: Probable conserved transmembrane protein - none -
fig|6666666.67480.peg.582 CDS gi|543385158|gb|AVFF01000052.1| 125010 125450 3 + 441 type II secretion system protein - none -
fig|6666666.67480.peg.583 CDS gi|543385158|gb|AVFF01000052.1| 125529 125410 -3 - 120 hypothetical protein - none -
fig|6666666.67480.peg.584 CDS gi|543385158|gb|AVFF01000052.1| 125648 125809 2 + 162 FIG043778: hypothetical protein - none -
fig|6666666.67480.peg.585 CDS gi|543385158|gb|AVFF01000052.1| 125892 126140 3 + 249 Putative secreted protein - none -
fig|6666666.67480.peg.586 CDS gi|543385158|gb|AVFF01000052.1| 126137 126511 2 + 375 hypothetical protein - none -
fig|6666666.67480.peg.587 CDS gi|543385158|gb|AVFF01000052.1| 128122 126545 -1 - 1578 FIG00545284: hypothetical protein - none -
fig|6666666.67480.peg.588 CDS gi|543385313|gb|AVFF01000051.1| 599 429 -2 - 171 FIG00746752: hypothetical protein - none -
fig|6666666.67480.peg.589 CDS gi|543385313|gb|AVFF01000051.1| 911 618 -2 - 294 Protein tyrosine/serine phosphatase - none -
fig|6666666.67480.peg.590 CDS gi|543385313|gb|AVFF01000051.1| 1092 937 -3 - 156 Protein tyrosine/serine phosphatase - none -
fig|6666666.67480.peg.591 CDS gi|543385313|gb|AVFF01000051.1| 1406 1263 -2 - 144 Protein tyrosine/serine phosphatase - none -
fig|6666666.67480.peg.592 CDS gi|543385313|gb|AVFF01000051.1| 2363 1422 -2 - 942 FIG00742920: hypothetical protein - none -
fig|6666666.67480.peg.593 CDS gi|543385313|gb|AVFF01000051.1| 2536 3702 1 + 1167 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67480.peg.594 CDS gi|543385382|gb|AVFF01000049.1| 1068 1199 3 + 132 hypothetical protein - none -
fig|6666666.67480.peg.596 CDS gi|543385410|gb|AVFF01000048.1| 84 1220 3 + 1137 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67480.peg.597 CDS gi|543385410|gb|AVFF01000048.1| 1265 1852 2 + 588 FIG00544046: hypothetical protein - none -
fig|6666666.67480.peg.598 CDS gi|543385410|gb|AVFF01000048.1| 4131 1849 -3 - 2283 FIG00543878: hypothetical protein - none -
fig|6666666.67480.peg.599 CDS gi|543385415|gb|AVFF01000047.1| 144 28 -3 - 117 hypothetical protein - none -
fig|6666666.67480.peg.600 CDS gi|543385415|gb|AVFF01000047.1| 413 159 -2 - 255 hypothetical protein - none -
fig|6666666.67480.peg.601 CDS gi|543385415|gb|AVFF01000047.1| 594 400 -3 - 195 hypothetical protein - none -
fig|6666666.67480.peg.602 CDS gi|543385415|gb|AVFF01000047.1| 1672 1875 1 + 204 Phage integrase, site-specific tyrosine recombinase # Pham107 - none -
fig|6666666.67480.peg.603 CDS gi|543385415|gb|AVFF01000047.1| 3146 1872 -2 - 1275 hypothetical protein - none -
fig|6666666.67480.peg.604 CDS gi|543385415|gb|AVFF01000047.1| 4780 3149 -1 - 1632 hypothetical protein - none -
fig|6666666.67480.peg.605 CDS gi|543385594|gb|AVFF01000046.1| 113 394 2 + 282 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67480.peg.606 CDS gi|543385594|gb|AVFF01000046.1| 663 466 -3 - 198 hypothetical protein - none -
fig|6666666.67480.peg.607 CDS gi|543385594|gb|AVFF01000046.1| 899 1330 2 + 432 hypothetical protein - none -
fig|6666666.67480.peg.608 CDS gi|543385594|gb|AVFF01000046.1| 1695 2090 3 + 396 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.67480.peg.609 CDS gi|543385594|gb|AVFF01000046.1| 2108 2644 2 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67480.peg.610 CDS gi|543385594|gb|AVFF01000046.1| 2648 3043 2 + 396 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67480.peg.611 CDS gi|543385594|gb|AVFF01000046.1| 3084 3698 3 + 615 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.67480.peg.612 CDS gi|543385594|gb|AVFF01000046.1| 3702 3887 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67480.peg.613 CDS gi|543385594|gb|AVFF01000046.1| 3895 4344 1 + 450 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67480.peg.614 CDS gi|543385673|gb|AVFF01000043.1| 35 151 2 + 117 hypothetical protein - none -
fig|6666666.67480.peg.615 CDS gi|543385673|gb|AVFF01000043.1| 550 3105 1 + 2556 putative membrane protein - none -
fig|6666666.67480.peg.616 CDS gi|543385673|gb|AVFF01000043.1| 3187 4437 1 + 1251 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67480.peg.617 CDS gi|543385673|gb|AVFF01000043.1| 4421 5389 2 + 969 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67480.peg.618 CDS gi|543385673|gb|AVFF01000043.1| 5913 6044 3 + 132 hypothetical protein - none -
fig|6666666.67480.peg.619 CDS gi|543385673|gb|AVFF01000043.1| 6521 6114 -2 - 408 Mobile element protein - none -
fig|6666666.67480.peg.620 CDS gi|543385745|gb|AVFF01000041.1| 1038 2573 3 + 1536 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67480.peg.621 CDS gi|543385745|gb|AVFF01000041.1| 3550 2732 -1 - 819 FIG00544174: hypothetical protein - none -
fig|6666666.67480.peg.622 CDS gi|543385745|gb|AVFF01000041.1| 4676 3789 -2 - 888 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) TCA Cycle
fig|6666666.67480.peg.623 CDS gi|543385745|gb|AVFF01000041.1| 5873 4695 -2 - 1179 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) TCA Cycle
fig|6666666.67480.peg.624 CDS gi|543385745|gb|AVFF01000041.1| 6591 6214 -3 - 378 Thioredoxin - none -
fig|6666666.67480.peg.625 CDS gi|543385745|gb|AVFF01000041.1| 8322 6775 -3 - 1548 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67480.peg.626 CDS gi|543385745|gb|AVFF01000041.1| 9361 8900 -1 - 462 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67480.peg.627 CDS gi|543385745|gb|AVFF01000041.1| 10025 9450 -2 - 576 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67480.peg.628 CDS gi|543385745|gb|AVFF01000041.1| 10374 10087 -3 - 288 SSU ribosomal protein S6p - none -
fig|6666666.67480.peg.629 CDS gi|543385745|gb|AVFF01000041.1| 10826 10635 -2 - 192 hypothetical protein - none -
fig|6666666.67480.peg.630 CDS gi|543385745|gb|AVFF01000041.1| 12349 10823 -1 - 1527 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67480.peg.631 CDS gi|543385745|gb|AVFF01000041.1| 14769 12349 -3 - 2421 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67480.peg.632 CDS gi|543385745|gb|AVFF01000041.1| 14834 14959 2 + 126 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67480.peg.633 CDS gi|543385745|gb|AVFF01000041.1| 14944 15273 1 + 330 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67480.peg.634 CDS gi|543385745|gb|AVFF01000041.1| 15310 15765 1 + 456 Transcriptional regulator, MarR family - none -
fig|6666666.67480.peg.635 CDS gi|543385745|gb|AVFF01000041.1| 15785 16777 2 + 993 Universal stress protein family - none -
fig|6666666.67480.peg.636 CDS gi|543385745|gb|AVFF01000041.1| 16821 17288 3 + 468 hypothetical membrane protein - none -
fig|6666666.67480.peg.637 CDS gi|543385745|gb|AVFF01000041.1| 18357 17365 -3 - 993 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67480.peg.638 CDS gi|543385745|gb|AVFF01000041.1| 18998 18498 -2 - 501 ATP-dependent Zn protease - none -
fig|6666666.67480.peg.639 CDS gi|543385745|gb|AVFF01000041.1| 19990 18992 -1 - 999 ATP-dependent Zn protease - none -
fig|6666666.67480.peg.640 CDS gi|543385745|gb|AVFF01000041.1| 20168 21061 2 + 894 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67480.peg.641 CDS gi|543385745|gb|AVFF01000041.1| 21118 23052 1 + 1935 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67480.peg.642 CDS gi|543385745|gb|AVFF01000041.1| 23504 23124 -2 - 381 hypothetical protein - none -
fig|6666666.67480.peg.643 CDS gi|543385745|gb|AVFF01000041.1| 23863 23627 -1 - 237 hypothetical protein - none -
fig|6666666.67480.peg.644 CDS gi|543385745|gb|AVFF01000041.1| 25665 24133 -3 - 1533 hypothetical membrane protein - none -
fig|6666666.67480.peg.645 CDS gi|543385745|gb|AVFF01000041.1| 25847 25662 -2 - 186 hypothetical protein - none -
fig|6666666.67480.peg.646 CDS gi|543385745|gb|AVFF01000041.1| 27160 26528 -1 - 633 DNA-binding response regulator, LuxR family - none -
fig|6666666.67480.peg.647 CDS gi|543385745|gb|AVFF01000041.1| 28431 27247 -3 - 1185 two-component system sensor kinase - none -
fig|6666666.67480.peg.648 CDS gi|543385745|gb|AVFF01000041.1| 29117 28968 -2 - 150 hypothetical protein - none -
fig|6666666.67480.peg.649 CDS gi|543385745|gb|AVFF01000041.1| 29546 29376 -2 - 171 hypothetical protein - none -
fig|6666666.67480.peg.650 CDS gi|543385745|gb|AVFF01000041.1| 29718 29984 3 + 267 hypothetical protein - none -
fig|6666666.67480.peg.651 CDS gi|543385745|gb|AVFF01000041.1| 30672 30013 -3 - 660 Trk system potassium uptake protein TrkA Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.67480.peg.652 CDS gi|543385745|gb|AVFF01000041.1| 32020 30665 -1 - 1356 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.67480.peg.653 CDS gi|543385745|gb|AVFF01000041.1| 32731 32075 -1 - 657 ABC transport system ATP-binding protein - none -
fig|6666666.67480.peg.654 CDS gi|543385745|gb|AVFF01000041.1| 34018 32801 -1 - 1218 FIG00545752: hypothetical protein - none -
fig|6666666.67480.peg.655 CDS gi|543385745|gb|AVFF01000041.1| 34050 35498 3 + 1449 two-component system histidine kinase ChrS - none -
fig|6666666.67480.peg.656 CDS gi|543385745|gb|AVFF01000041.1| 35514 36131 3 + 618 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.657 CDS gi|543385745|gb|AVFF01000041.1| 37529 36198 -2 - 1332 hypothetical protein - none -
fig|6666666.67480.peg.658 CDS gi|543385745|gb|AVFF01000041.1| 38528 40249 2 + 1722 Fumarate/succinate/L-aspartate dehydrogenases - none -
fig|6666666.67480.peg.659 CDS gi|543385745|gb|AVFF01000041.1| 41017 40340 -1 - 678 ThiJ/PfpI family protein - none -
fig|6666666.67480.peg.660 CDS gi|543385745|gb|AVFF01000041.1| 41648 41950 2 + 303 hypothetical protein - none -
fig|6666666.67480.peg.661 CDS gi|543385745|gb|AVFF01000041.1| 42373 42011 -1 - 363 Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) - none -
fig|6666666.67480.peg.662 CDS gi|543385745|gb|AVFF01000041.1| 42819 42418 -3 - 402 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) - none -
fig|6666666.67480.peg.663 CDS gi|543385745|gb|AVFF01000041.1| 43441 44865 1 + 1425 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) - none -
fig|6666666.67480.peg.664 CDS gi|543385745|gb|AVFF01000041.1| 45468 45115 -3 - 354 hypothetical protein - none -
fig|6666666.67480.peg.665 CDS gi|543385745|gb|AVFF01000041.1| 45695 45820 2 + 126 hypothetical protein - none -
fig|6666666.67480.peg.666 CDS gi|543385745|gb|AVFF01000041.1| 46386 47306 3 + 921 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.667 CDS gi|543385745|gb|AVFF01000041.1| 47331 48191 3 + 861 integral membrane protein - none -
fig|6666666.67480.peg.668 CDS gi|543385745|gb|AVFF01000041.1| 48229 49371 1 + 1143 putative two-component system sensor kinase - none -
fig|6666666.67480.peg.669 CDS gi|543385745|gb|AVFF01000041.1| 49368 49991 3 + 624 putative two-component response regulator - none -
fig|6666666.67480.peg.670 CDS gi|543385745|gb|AVFF01000041.1| 50196 50561 3 + 366 putative membrane protein - none -
fig|6666666.67480.peg.671 CDS gi|543385745|gb|AVFF01000041.1| 50613 52073 3 + 1461 hypothetical protein - none -
fig|6666666.67480.peg.672 CDS gi|543385745|gb|AVFF01000041.1| 52477 52076 -1 - 402 hypothetical protein - none -
fig|6666666.67480.peg.673 CDS gi|543385745|gb|AVFF01000041.1| 53825 52542 -2 - 1284 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.67480.peg.674 CDS gi|543385745|gb|AVFF01000041.1| 54410 54033 -2 - 378 hypothetical protein - none -
fig|6666666.67480.peg.675 CDS gi|543385745|gb|AVFF01000041.1| 54502 54948 1 + 447 hypothetical protein - none -
fig|6666666.67480.peg.676 CDS gi|543385745|gb|AVFF01000041.1| 57880 54995 -1 - 2886 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67480.peg.677 CDS gi|543385745|gb|AVFF01000041.1| 57942 59675 3 + 1734 Pyruvate decarboxylase (EC 4.1.1.1); Alpha-keto-acid decarboxylase (EC 4.1.1.-) - none -
fig|6666666.67480.peg.678 CDS gi|543385745|gb|AVFF01000041.1| 59961 61238 3 + 1278 hypothetical protein - none -
fig|6666666.67480.peg.679 CDS gi|543385745|gb|AVFF01000041.1| 62665 61235 -1 - 1431 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.680 CDS gi|543385745|gb|AVFF01000041.1| 62850 63881 3 + 1032 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.67480.peg.681 CDS gi|543385745|gb|AVFF01000041.1| 65689 63938 -1 - 1752 hypothetical protein - none -
fig|6666666.67480.peg.682 CDS gi|543385745|gb|AVFF01000041.1| 66279 69287 3 + 3009 hypothetical protein - none -
fig|6666666.67480.peg.683 CDS gi|543385745|gb|AVFF01000041.1| 69287 70309 2 + 1023 hypothetical protein - none -
fig|6666666.67480.peg.684 CDS gi|543385745|gb|AVFF01000041.1| 71261 71377 2 + 117 hypothetical protein - none -
fig|6666666.67480.peg.685 CDS gi|543385745|gb|AVFF01000041.1| 71659 72915 1 + 1257 major facilitator superfamily MFS_1 - none -
fig|6666666.67480.peg.686 CDS gi|543385745|gb|AVFF01000041.1| 73618 72977 -1 - 642 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67480.peg.687 CDS gi|543385745|gb|AVFF01000041.1| 73688 74155 2 + 468 CrcB protein - none -
fig|6666666.67480.peg.688 CDS gi|543385745|gb|AVFF01000041.1| 74152 74541 1 + 390 CrcB protein - none -
fig|6666666.67480.peg.689 CDS gi|543385745|gb|AVFF01000041.1| 75923 75144 -2 - 780 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67480.peg.690 CDS gi|543385745|gb|AVFF01000041.1| 76781 75948 -2 - 834 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67480.peg.691 CDS gi|543385745|gb|AVFF01000041.1| 78401 76809 -2 - 1593 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67480.peg.692 CDS gi|543385745|gb|AVFF01000041.1| 82135 78401 -1 - 3735 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67480.peg.693 CDS gi|543385745|gb|AVFF01000041.1| 83174 82173 -2 - 1002 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67480.peg.694 CDS gi|543385745|gb|AVFF01000041.1| 83497 83207 -1 - 291 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67480.peg.695 CDS gi|543385745|gb|AVFF01000041.1| 83726 84205 2 + 480 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67480.peg.696 CDS gi|543385745|gb|AVFF01000041.1| 85465 84242 -1 - 1224 hypothetical protein - none -
fig|6666666.67480.peg.697 CDS gi|543385745|gb|AVFF01000041.1| 87255 85768 -3 - 1488 hypothetical protein - none -
fig|6666666.67480.peg.698 CDS gi|543385745|gb|AVFF01000041.1| 88215 87361 -3 - 855 ABC transporter component, possibly Mn transport - none -
fig|6666666.67480.peg.699 CDS gi|543385745|gb|AVFF01000041.1| 88978 88244 -1 - 735 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67480.peg.700 CDS gi|543385745|gb|AVFF01000041.1| 89892 88981 -3 - 912 FIG00545006: hypothetical protein - none -
fig|6666666.67480.peg.701 CDS gi|543385745|gb|AVFF01000041.1| 91503 89908 -3 - 1596 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67480.peg.702 CDS gi|543385745|gb|AVFF01000041.1| 93451 91535 -1 - 1917 FIG00548024: hypothetical protein - none -
fig|6666666.67480.peg.703 CDS gi|543385745|gb|AVFF01000041.1| 96142 93458 -1 - 2685 FIG00547842: hypothetical protein - none -
fig|6666666.67480.peg.704 CDS gi|543385745|gb|AVFF01000041.1| 99108 96304 -3 - 2805 hypothetical protein - none -
fig|6666666.67480.peg.705 CDS gi|543385745|gb|AVFF01000041.1| 101043 99376 -3 - 1668 hypothetical protein - none -
fig|6666666.67480.peg.706 CDS gi|543385745|gb|AVFF01000041.1| 101966 101040 -2 - 927 putative ABC transporter, ATP-binding protein - none -
fig|6666666.67480.peg.707 CDS gi|543385745|gb|AVFF01000041.1| 102066 103511 3 + 1446 Sodium/glycine symporter GlyP - none -
fig|6666666.67480.peg.708 CDS gi|543385745|gb|AVFF01000041.1| 104923 103556 -1 - 1368 Histidine permease YuiF - none -
fig|6666666.67480.peg.709 CDS gi|543385745|gb|AVFF01000041.1| 105937 104981 -1 - 957 Formiminoglutamase (EC 3.5.3.8) Histidine Degradation
fig|6666666.67480.peg.710 CDS gi|543385745|gb|AVFF01000041.1| 106226 107812 2 + 1587 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.67480.peg.711 CDS gi|543385745|gb|AVFF01000041.1| 108011 107844 -2 - 168 hypothetical protein - none -
fig|6666666.67480.peg.712 CDS gi|543385745|gb|AVFF01000041.1| 108010 109215 1 + 1206 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.67480.peg.713 CDS gi|543385745|gb|AVFF01000041.1| 109325 110932 2 + 1608 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67480.peg.714 CDS gi|543385745|gb|AVFF01000041.1| 110932 111585 1 + 654 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67480.peg.715 CDS gi|543385745|gb|AVFF01000041.1| 111585 112730 3 + 1146 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67480.peg.716 CDS gi|543385745|gb|AVFF01000041.1| 112720 113976 1 + 1257 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67480.peg.717 CDS gi|543385745|gb|AVFF01000041.1| 113993 114220 2 + 228 hypothetical protein - none -
fig|6666666.67480.peg.718 CDS gi|543385745|gb|AVFF01000041.1| 114229 115497 1 + 1269 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67480.peg.719 CDS gi|543385745|gb|AVFF01000041.1| 115500 116330 3 + 831 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67480.peg.720 CDS gi|543385745|gb|AVFF01000041.1| 117756 116476 -3 - 1281 putative transmembrane symporter - none -
fig|6666666.67480.peg.721 CDS gi|543385745|gb|AVFF01000041.1| 117850 118320 1 + 471 putative tryptophan transpoter - none -
fig|6666666.67480.peg.722 CDS gi|543385745|gb|AVFF01000041.1| 118521 118799 3 + 279 Putative iron-sulphur protein - none -
fig|6666666.67480.peg.723 CDS gi|543385745|gb|AVFF01000041.1| 118854 119129 3 + 276 No significant database matches - none -
fig|6666666.67480.peg.724 CDS gi|543385745|gb|AVFF01000041.1| 119445 119194 -3 - 252 Branched-chain amino acid transport protein azlC - none -
fig|6666666.67480.peg.725 CDS gi|543385745|gb|AVFF01000041.1| 120963 119503 -3 - 1461 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67480.peg.726 CDS gi|543385745|gb|AVFF01000041.1| 120992 121852 2 + 861 MutT/nudix family protein - none -
fig|6666666.67480.peg.727 CDS gi|543385745|gb|AVFF01000041.1| 121849 122994 1 + 1146 Putative secreted protein - none -
fig|6666666.67480.peg.728 CDS gi|543385745|gb|AVFF01000041.1| 123213 123608 3 + 396 hypothetical protein - none -
fig|6666666.67480.peg.729 CDS gi|543385745|gb|AVFF01000041.1| 123583 124200 1 + 618 probable secreted protein. - none -
fig|6666666.67480.peg.730 CDS gi|543385745|gb|AVFF01000041.1| 124222 124650 1 + 429 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67480.peg.731 CDS gi|543385745|gb|AVFF01000041.1| 124713 127898 3 + 3186 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67480.peg.732 CDS gi|543385745|gb|AVFF01000041.1| 128037 128600 3 + 564 putative RNA polymerase sigma factor - none -
fig|6666666.67480.peg.733 CDS gi|543385745|gb|AVFF01000041.1| 128728 129657 1 + 930 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.67480.peg.734 CDS gi|543385745|gb|AVFF01000041.1| 129843 130166 3 + 324 Thioredoxin - none -
fig|6666666.67480.peg.735 CDS gi|543385745|gb|AVFF01000041.1| 130334 131500 2 + 1167 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.67480.peg.736 CDS gi|543385745|gb|AVFF01000041.1| 131879 131721 -2 - 159 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67480.peg.737 CDS gi|543385745|gb|AVFF01000041.1| 132948 131848 -3 - 1101 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67480.peg.738 CDS gi|543385745|gb|AVFF01000041.1| 133411 132965 -1 - 447 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67480.peg.739 CDS gi|543385745|gb|AVFF01000041.1| 133902 133396 -3 - 507 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67480.peg.740 CDS gi|543385745|gb|AVFF01000041.1| 134515 133913 -1 - 603 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67480.peg.741 CDS gi|543385745|gb|AVFF01000041.1| 135522 134515 -3 - 1008 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.67480.peg.742 CDS gi|543385745|gb|AVFF01000041.1| 136182 135844 -3 - 339 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.67480.peg.743 CDS gi|543385745|gb|AVFF01000041.1| 136413 136270 -3 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67480.peg.744 CDS gi|543385745|gb|AVFF01000041.1| 137317 139023 1 + 1707 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67480.peg.745 CDS gi|543385745|gb|AVFF01000041.1| 139111 138998 -1 - 114 hypothetical protein - none -
fig|6666666.67480.peg.746 CDS gi|543385745|gb|AVFF01000041.1| 139730 140917 2 + 1188 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67480.peg.747 CDS gi|543385971|gb|AVFF01000039.1| 1593 157 -3 - 1437 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.748 CDS gi|543385971|gb|AVFF01000039.1| 2279 1695 -2 - 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67480.peg.749 CDS gi|543385971|gb|AVFF01000039.1| 3025 2339 -1 - 687 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67480.peg.750 CDS gi|543385971|gb|AVFF01000039.1| 4044 3274 -3 - 771 oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.67480.peg.751 CDS gi|543385971|gb|AVFF01000039.1| 5033 4044 -2 - 990 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67480.peg.752 CDS gi|543385971|gb|AVFF01000039.1| 6567 5059 -3 - 1509 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67480.peg.753 CDS gi|543385971|gb|AVFF01000039.1| 7286 6657 -2 - 630 Putative membrane protein - none -
fig|6666666.67480.peg.754 CDS gi|543386038|gb|AVFF01000038.1| 501 214 -3 - 288 hypothetical protein - none -
fig|6666666.67480.peg.755 CDS gi|543386038|gb|AVFF01000038.1| 938 501 -2 - 438 Putative phage protein - none -
fig|6666666.67480.peg.756 CDS gi|543386038|gb|AVFF01000038.1| 1357 944 -1 - 414 hypothetical protein - none -
fig|6666666.67480.peg.757 CDS gi|543386038|gb|AVFF01000038.1| 1720 1370 -1 - 351 No significant database matches - none -
fig|6666666.67480.peg.758 CDS gi|543386038|gb|AVFF01000038.1| 2033 1722 -2 - 312 No significant database matches - none -
fig|6666666.67480.peg.759 CDS gi|543386038|gb|AVFF01000038.1| 3473 2037 -2 - 1437 Conserved hypothetical exported protein - none -
fig|6666666.67480.peg.760 CDS gi|543386038|gb|AVFF01000038.1| 3962 3795 -2 - 168 hypothetical protein - none -
fig|6666666.67480.peg.761 CDS gi|543386038|gb|AVFF01000038.1| 4684 3965 -1 - 720 Phage endolysin Phage lysis modules
fig|6666666.67480.peg.762 CDS gi|543386038|gb|AVFF01000038.1| 5810 4728 -2 - 1083 hypothetical protein - none -
fig|6666666.67480.peg.763 CDS gi|543386038|gb|AVFF01000038.1| 5830 5949 1 + 120 hypothetical protein - none -
fig|6666666.67480.peg.764 CDS gi|543386038|gb|AVFF01000038.1| 7413 6070 -3 - 1344 Phage terminase - none -
fig|6666666.67480.peg.765 CDS gi|543386038|gb|AVFF01000038.1| 7726 7457 -1 - 270 hypothetical protein - none -
fig|6666666.67480.peg.766 CDS gi|543386038|gb|AVFF01000038.1| 9325 9059 -1 - 267 hypothetical protein - none -
fig|6666666.67480.peg.767 CDS gi|543386038|gb|AVFF01000038.1| 9577 9338 -1 - 240 hypothetical protein - none -
fig|6666666.67480.peg.768 CDS gi|543386110|gb|AVFF01000037.1| 1816 335 -1 - 1482 amino acid carrier protein - none -
fig|6666666.67480.peg.769 CDS gi|543386110|gb|AVFF01000037.1| 2744 1836 -2 - 909 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67480.peg.770 CDS gi|543386110|gb|AVFF01000037.1| 3511 2750 -1 - 762 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67480.peg.771 CDS gi|543386110|gb|AVFF01000037.1| 4046 3504 -2 - 543 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67480.peg.772 CDS gi|543386110|gb|AVFF01000037.1| 4800 4078 -3 - 723 Cell division initiation protein - none -
fig|6666666.67480.peg.773 CDS gi|543386110|gb|AVFF01000037.1| 6330 4894 -3 - 1437 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67480.peg.774 CDS gi|543386110|gb|AVFF01000037.1| 6504 7619 3 + 1116 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.67480.peg.775 CDS gi|543386110|gb|AVFF01000037.1| 8043 7645 -3 - 399 FIG00544156: hypothetical protein - none -
fig|6666666.67480.peg.776 CDS gi|543386110|gb|AVFF01000037.1| 9560 8271 -2 - 1290 hypothetical protein - none -
fig|6666666.67480.peg.777 CDS gi|543386110|gb|AVFF01000037.1| 10070 9849 -2 - 222 Mobile element protein - none -
fig|6666666.67480.peg.778 CDS gi|543386170|gb|AVFF01000036.1| 270 575 3 + 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.67480.peg.779 CDS gi|543386170|gb|AVFF01000036.1| 630 1280 3 + 651 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67480.peg.780 CDS gi|543386170|gb|AVFF01000036.1| 1283 1942 2 + 660 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67480.peg.781 CDS gi|543386170|gb|AVFF01000036.1| 1944 2246 3 + 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67480.peg.782 CDS gi|543386170|gb|AVFF01000036.1| 2271 3107 3 + 837 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67480.peg.783 CDS gi|543386170|gb|AVFF01000036.1| 3124 3399 1 + 276 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.67480.peg.784 CDS gi|543386170|gb|AVFF01000036.1| 3403 3765 1 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67480.peg.785 CDS gi|543386170|gb|AVFF01000036.1| 3766 4503 1 + 738 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.67480.peg.786 CDS gi|543386170|gb|AVFF01000036.1| 4507 4923 1 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67480.peg.787 CDS gi|543386170|gb|AVFF01000036.1| 4923 5153 3 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67480.peg.788 CDS gi|543386170|gb|AVFF01000036.1| 5156 5464 2 + 309 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.67480.peg.789 CDS gi|543386170|gb|AVFF01000036.1| 5668 6645 1 + 978 putative iron ABC transport system, solute-binding protein - none -
fig|6666666.67480.peg.790 CDS gi|543386170|gb|AVFF01000036.1| 7454 6768 -2 - 687 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67480.peg.791 CDS gi|543386170|gb|AVFF01000036.1| 8662 7568 -1 - 1095 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67480.peg.792 CDS gi|543386170|gb|AVFF01000036.1| 9681 8659 -3 - 1023 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67480.peg.793 CDS gi|543386170|gb|AVFF01000036.1| 10116 10487 3 + 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67480.peg.794 CDS gi|543386170|gb|AVFF01000036.1| 10488 10802 3 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67480.peg.795 CDS gi|543386325|gb|AVFF01000035.1| 82 249 1 + 168 hypothetical protein - none -
fig|6666666.67480.peg.796 CDS gi|543386325|gb|AVFF01000035.1| 559 311 -1 - 249 hypothetical protein - none -
fig|6666666.67480.peg.797 CDS gi|543386325|gb|AVFF01000035.1| 523 642 1 + 120 hypothetical protein - none -
fig|6666666.67480.peg.798 CDS gi|543386325|gb|AVFF01000035.1| 639 878 3 + 240 Ferrienterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) - none -
fig|6666666.67480.peg.799 CDS gi|543386325|gb|AVFF01000035.1| 905 1525 2 + 621 Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) Siderophore Enterobactin
fig|6666666.67480.peg.800 CDS gi|543386325|gb|AVFF01000035.1| 2604 3371 3 + 768 hypothetical protein - none -
fig|6666666.67480.peg.801 CDS gi|543386325|gb|AVFF01000035.1| 5611 3959 -1 - 1653 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.67480.peg.802 CDS gi|543386325|gb|AVFF01000035.1| 5748 5608 -3 - 141 hypothetical protein - none -
fig|6666666.67480.peg.803 CDS gi|543386325|gb|AVFF01000035.1| 5747 7027 2 + 1281 putative transporter - none -
fig|6666666.67480.peg.804 CDS gi|543386325|gb|AVFF01000035.1| 8136 8303 3 + 168 hypothetical protein - none -
fig|6666666.67480.peg.805 CDS gi|543386325|gb|AVFF01000035.1| 8454 8687 3 + 234 hypothetical protein - none -
fig|6666666.67480.peg.806 CDS gi|543386325|gb|AVFF01000035.1| 9906 8671 -3 - 1236 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67480.peg.807 CDS gi|543386325|gb|AVFF01000035.1| 10587 9928 -3 - 660 hypothetical protein - none -
fig|6666666.67480.peg.808 CDS gi|543386325|gb|AVFF01000035.1| 10832 10623 -2 - 210 hypothetical protein - none -
fig|6666666.67480.peg.809 CDS gi|543386325|gb|AVFF01000035.1| 11700 10795 -3 - 906 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.810 CDS gi|543386325|gb|AVFF01000035.1| 11749 11886 1 + 138 hypothetical protein - none -
fig|6666666.67480.peg.811 CDS gi|543386325|gb|AVFF01000035.1| 12602 11892 -2 - 711 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter - none -
fig|6666666.67480.peg.812 CDS gi|543386325|gb|AVFF01000035.1| 13431 12613 -3 - 819 Substrate-specific component STY3230 of queuosine-regulated ECF transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.67480.peg.813 CDS gi|543386325|gb|AVFF01000035.1| 14145 13612 -3 - 534 hypothetical protein - none -
fig|6666666.67480.peg.814 CDS gi|543386325|gb|AVFF01000035.1| 15380 14283 -2 - 1098 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67480.peg.815 CDS gi|543386325|gb|AVFF01000035.1| 16782 15406 -3 - 1377 putative integral membrane protein - none -
fig|6666666.67480.peg.816 CDS gi|543386325|gb|AVFF01000035.1| 17020 16865 -1 - 156 Mobile element protein - none -
fig|6666666.67480.peg.817 CDS gi|543386348|gb|AVFF01000034.1| 104 1135 2 + 1032 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67480.peg.818 CDS gi|543386348|gb|AVFF01000034.1| 1132 1797 1 + 666 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67480.peg.819 CDS gi|543386348|gb|AVFF01000034.1| 1931 3958 2 + 2028 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67480.peg.820 CDS gi|543386348|gb|AVFF01000034.1| 4049 4939 2 + 891 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67480.peg.821 CDS gi|543386348|gb|AVFF01000034.1| 6160 4958 -1 - 1203 hypothetical protein - none -
fig|6666666.67480.peg.822 CDS gi|543386348|gb|AVFF01000034.1| 6628 9228 1 + 2601 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67480.peg.823 CDS gi|543386348|gb|AVFF01000034.1| 9233 9583 2 + 351 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67480.peg.824 CDS gi|543386348|gb|AVFF01000034.1| 11094 9973 -3 - 1122 Mobile element protein - none -
fig|6666666.67480.peg.825 CDS gi|543386348|gb|AVFF01000034.1| 11757 11350 -3 - 408 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67480.peg.826 CDS gi|543386348|gb|AVFF01000034.1| 12872 11754 -2 - 1119 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67480.peg.827 CDS gi|543386348|gb|AVFF01000034.1| 12953 13300 2 + 348 putative transcription regulator - none -
fig|6666666.67480.peg.828 CDS gi|543386348|gb|AVFF01000034.1| 13348 13506 1 + 159 monooxygenase, putative - none -
fig|6666666.67480.peg.829 CDS gi|543386348|gb|AVFF01000034.1| 13571 13933 2 + 363 monooxygenase, putative - none -
fig|6666666.67480.peg.830 CDS gi|543386348|gb|AVFF01000034.1| 14739 16238 3 + 1500 major facilitator superfamily MFS_1 - none -
fig|6666666.67480.peg.831 CDS gi|543386348|gb|AVFF01000034.1| 16256 16828 2 + 573 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.832 CDS gi|543386369|gb|AVFF01000033.1| 1240 236 -1 - 1005 hypothetical protein - none -
fig|6666666.67480.peg.833 CDS gi|543386369|gb|AVFF01000033.1| 2307 1498 -3 - 810 FIG00549538: hypothetical protein - none -
fig|6666666.67480.peg.834 CDS gi|543386369|gb|AVFF01000033.1| 2943 2455 -3 - 489 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67480.peg.835 CDS gi|543386369|gb|AVFF01000033.1| 3973 2924 -1 - 1050 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67480.peg.836 CDS gi|543386369|gb|AVFF01000033.1| 4103 5356 2 + 1254 Cystathionine gamma-lyase (EC 4.4.1.1) Cysteine Biosynthesis;
Glycine and Serine Utilization;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.837 CDS gi|543386369|gb|AVFF01000033.1| 5402 6148 2 + 747 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.67480.peg.838 CDS gi|543386369|gb|AVFF01000033.1| 8745 6184 -3 - 2562 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67480.peg.839 CDS gi|543386369|gb|AVFF01000033.1| 8795 8950 2 + 156 hypothetical protein - none -
fig|6666666.67480.peg.840 CDS gi|543386369|gb|AVFF01000033.1| 9020 9631 2 + 612 FIG00544229: hypothetical protein - none -
fig|6666666.67480.peg.841 CDS gi|543386369|gb|AVFF01000033.1| 9634 9906 1 + 273 hypothetical protein - none -
fig|6666666.67480.peg.842 CDS gi|543386369|gb|AVFF01000033.1| 9990 10466 3 + 477 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase Pentose phosphate pathway
fig|6666666.67480.peg.843 CDS gi|543386369|gb|AVFF01000033.1| 11595 10771 -3 - 825 FIG00997919: hypothetical protein - none -
fig|6666666.67480.peg.844 CDS gi|543386369|gb|AVFF01000033.1| 12068 13813 2 + 1746 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) - none -
fig|6666666.67480.peg.845 CDS gi|543386369|gb|AVFF01000033.1| 16158 13825 -3 - 2334 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.67480.peg.846 CDS gi|543386369|gb|AVFF01000033.1| 16466 17734 2 + 1269 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67480.peg.847 CDS gi|543386369|gb|AVFF01000033.1| 17710 17853 1 + 144 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67480.peg.848 CDS gi|543386878|gb|AVFF01000032.1| 537 79 -3 - 459 Cyanate hydratase (EC 4.2.1.104) Cyanate hydrolysis
fig|6666666.67480.peg.849 CDS gi|543386878|gb|AVFF01000032.1| 1340 582 -2 - 759 Iron compound ABC transporter, ATP-binding protein - none -
fig|6666666.67480.peg.850 CDS gi|543386878|gb|AVFF01000032.1| 2302 1337 -1 - 966 Iron compound ABC transporter, permease protein - none -
fig|6666666.67480.peg.851 CDS gi|543386878|gb|AVFF01000032.1| 3158 2292 -2 - 867 Iron compound ABC transporter, permease protein - none -
fig|6666666.67480.peg.852 CDS gi|543386878|gb|AVFF01000032.1| 4244 3243 -2 - 1002 Iron compound ABC transporter, periplasmic iron compound-binding protein - none -
fig|6666666.67480.peg.853 CDS gi|543386878|gb|AVFF01000032.1| 4705 5886 1 + 1182 Mobile element protein - none -
fig|6666666.67480.peg.854 CDS gi|543386878|gb|AVFF01000032.1| 6806 6189 -2 - 618 di- and tricarboxylate transporter - none -
fig|6666666.67480.peg.855 CDS gi|543386878|gb|AVFF01000032.1| 7773 6772 -3 - 1002 di- and tricarboxylate transporter - none -
fig|6666666.67480.peg.856 CDS gi|543386878|gb|AVFF01000032.1| 9204 7840 -3 - 1365 Mg/Co/Ni transporter MgtE Magnesium transport
fig|6666666.67480.peg.857 CDS gi|543386878|gb|AVFF01000032.1| 10091 9351 -2 - 741 hypothetical protein - none -
fig|6666666.67480.peg.858 CDS gi|543386878|gb|AVFF01000032.1| 11509 10121 -1 - 1389 Putative membrane protein - none -
fig|6666666.67480.peg.859 CDS gi|543386878|gb|AVFF01000032.1| 11774 12808 2 + 1035 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67480.peg.860 CDS gi|543386878|gb|AVFF01000032.1| 12808 13227 1 + 420 putative membrane protein - none -
fig|6666666.67480.peg.861 CDS gi|543386878|gb|AVFF01000032.1| 13414 13635 1 + 222 hypothetical protein - none -
fig|6666666.67480.peg.862 CDS gi|543386878|gb|AVFF01000032.1| 13917 14957 3 + 1041 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67480.peg.863 CDS gi|543386878|gb|AVFF01000032.1| 16189 14954 -1 - 1236 selenocysteine lyase - none -
fig|6666666.67480.peg.864 CDS gi|543386878|gb|AVFF01000032.1| 16370 17263 2 + 894 O-antigen export system permease protein RfbD - none -
fig|6666666.67480.peg.865 CDS gi|543386878|gb|AVFF01000032.1| 17309 18094 2 + 786 O-antigen export system, ATP-binding protein - none -
fig|6666666.67480.peg.866 CDS gi|543386906|gb|AVFF01000031.1| 676 1326 1 + 651 FIG00545160: hypothetical protein - none -
fig|6666666.67480.peg.867 CDS gi|543386906|gb|AVFF01000031.1| 3611 1401 -2 - 2211 GTP-binding protein EngA - none -
fig|6666666.67480.peg.868 CDS gi|543386906|gb|AVFF01000031.1| 4527 3676 -3 - 852 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67480.peg.869 CDS gi|543386906|gb|AVFF01000031.1| 5156 4557 -2 - 600 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67480.peg.870 CDS gi|543386906|gb|AVFF01000031.1| 6132 5263 -3 - 870 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67480.peg.871 CDS gi|543386906|gb|AVFF01000031.1| 7022 6129 -2 - 894 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67480.peg.872 CDS gi|543386906|gb|AVFF01000031.1| 7655 7212 -2 - 444 hypothetical protein - none -
fig|6666666.67480.peg.873 CDS gi|543386906|gb|AVFF01000031.1| 8652 7723 -3 - 930 Tyrosine recombinase XerD - none -
fig|6666666.67480.peg.874 CDS gi|543386906|gb|AVFF01000031.1| 9407 8652 -2 - 756 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67480.peg.875 CDS gi|543386906|gb|AVFF01000031.1| 10357 9410 -1 - 948 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67480.peg.876 CDS gi|543386906|gb|AVFF01000031.1| 11541 10357 -3 - 1185 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67480.peg.877 CDS gi|543386906|gb|AVFF01000031.1| 12200 11592 -2 - 609 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67480.peg.878 CDS gi|543386906|gb|AVFF01000031.1| 13320 12163 -3 - 1158 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67480.peg.879 CDS gi|543386906|gb|AVFF01000031.1| 14243 13329 -2 - 915 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67480.peg.880 CDS gi|543386906|gb|AVFF01000031.1| 15160 14324 -1 - 837 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67480.peg.881 CDS gi|543386906|gb|AVFF01000031.1| 15392 15225 -2 - 168 hypothetical protein - none -
fig|6666666.67480.peg.882 CDS gi|543386906|gb|AVFF01000031.1| 16424 15396 -2 - 1029 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67480.peg.883 CDS gi|543386906|gb|AVFF01000031.1| 17254 16421 -1 - 834 TPR-repeat-containing protein - none -
fig|6666666.67480.peg.884 CDS gi|543386906|gb|AVFF01000031.1| 17695 18114 1 + 420 thermonuclease - none -
fig|6666666.67480.peg.885 CDS gi|543386950|gb|AVFF01000030.1| 837 968 3 + 132 hypothetical protein - none -
fig|6666666.67480.peg.886 CDS gi|543386950|gb|AVFF01000030.1| 1122 2024 3 + 903 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67480.peg.887 CDS gi|543386950|gb|AVFF01000030.1| 2009 4849 2 + 2841 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67480.peg.888 CDS gi|543386950|gb|AVFF01000030.1| 4924 5529 1 + 606 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.67480.peg.889 CDS gi|543386950|gb|AVFF01000030.1| 5618 6217 2 + 600 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.890 CDS gi|543386950|gb|AVFF01000030.1| 7973 6180 -2 - 1794 FIG00544299: hypothetical protein - none -
fig|6666666.67480.peg.891 CDS gi|543386950|gb|AVFF01000030.1| 9142 8183 -1 - 960 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) NAD and NADP cofactor biosynthesis global
fig|6666666.67480.peg.892 CDS gi|543386950|gb|AVFF01000030.1| 9919 9143 -1 - 777 Quinolinate synthetase (EC 2.5.1.72) NAD and NADP cofactor biosynthesis global
fig|6666666.67480.peg.893 CDS gi|543386950|gb|AVFF01000030.1| 11890 10328 -1 - 1563 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.67480.peg.894 CDS gi|543386950|gb|AVFF01000030.1| 11973 12608 3 + 636 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67480.peg.895 CDS gi|543386950|gb|AVFF01000030.1| 12696 13424 3 + 729 FIG00545464: hypothetical protein - none -
fig|6666666.67480.peg.896 CDS gi|543386950|gb|AVFF01000030.1| 13532 14530 2 + 999 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.897 CDS gi|543386950|gb|AVFF01000030.1| 14527 14808 1 + 282 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.898 CDS gi|543386950|gb|AVFF01000030.1| 14840 15442 2 + 603 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67480.peg.899 CDS gi|543386950|gb|AVFF01000030.1| 15496 16047 1 + 552 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67480.peg.900 CDS gi|543386950|gb|AVFF01000030.1| 16085 17071 2 + 987 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67480.peg.901 CDS gi|543386950|gb|AVFF01000030.1| 17397 18218 3 + 822 FIG00543890: hypothetical protein - none -
fig|6666666.67480.peg.902 CDS gi|543386950|gb|AVFF01000030.1| 19039 18416 -1 - 624 hypothetical protein - none -
fig|6666666.67480.peg.903 CDS gi|543386950|gb|AVFF01000030.1| 19577 19053 -2 - 525 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67480.peg.904 CDS gi|543386950|gb|AVFF01000030.1| 20168 19722 -2 - 447 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67480.peg.905 CDS gi|543386950|gb|AVFF01000030.1| 20316 21182 3 + 867 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67480.peg.906 CDS gi|543386950|gb|AVFF01000030.1| 21182 21502 2 + 321 FIG00543949: hypothetical protein - none -
fig|6666666.67480.peg.907 CDS gi|543386950|gb|AVFF01000030.1| 21505 22272 1 + 768 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67480.peg.908 CDS gi|543386950|gb|AVFF01000030.1| 23253 22339 -3 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67480.peg.909 CDS gi|543386950|gb|AVFF01000030.1| 23335 24603 1 + 1269 Serine hydroxymethyltransferase (EC 2.1.2.1) Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.67480.peg.910 CDS gi|543386950|gb|AVFF01000030.1| 24608 26800 2 + 2193 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) # PabAa Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67480.peg.911 CDS gi|543386950|gb|AVFF01000030.1| 26858 26986 2 + 129 hypothetical protein - none -
fig|6666666.67480.peg.912 CDS gi|543386950|gb|AVFF01000030.1| 26955 27836 3 + 882 ABC-type transport systems, periplasmic component - none -
fig|6666666.67480.peg.913 CDS gi|543386950|gb|AVFF01000030.1| 27941 28720 2 + 780 Aminodeoxychorismate lyase (EC 4.1.3.38) # PabAc Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67480.peg.914 CDS gi|543386950|gb|AVFF01000030.1| 29256 28774 -3 - 483 FIG00546727: hypothetical protein - none -
fig|6666666.67480.peg.915 CDS gi|543386950|gb|AVFF01000030.1| 29732 29367 -2 - 366 hypothetical protein - none -
fig|6666666.67480.peg.916 CDS gi|543386950|gb|AVFF01000030.1| 29799 30716 3 + 918 putative LysR-family transcriptional regulator - none -
fig|6666666.67480.peg.917 CDS gi|543386950|gb|AVFF01000030.1| 30833 31360 2 + 528 sortase or related acyltransferase - none -
fig|6666666.67480.peg.918 CDS gi|543386950|gb|AVFF01000030.1| 32256 31393 -3 - 864 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) EC699-706
fig|6666666.67480.peg.919 CDS gi|543386950|gb|AVFF01000030.1| 32876 32250 -2 - 627 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) EC699-706
fig|6666666.67480.peg.920 CDS gi|543386950|gb|AVFF01000030.1| 33643 32870 -1 - 774 Lactam utilization protein LamB EC699-706
fig|6666666.67480.peg.921 CDS gi|543386950|gb|AVFF01000030.1| 34893 33724 -3 - 1170 FIG00545033: hypothetical protein - none -
fig|6666666.67480.peg.922 CDS gi|543386950|gb|AVFF01000030.1| 34952 35158 2 + 207 hypothetical protein - none -
fig|6666666.67480.peg.923 CDS gi|543386950|gb|AVFF01000030.1| 35252 35401 2 + 150 hypothetical protein - none -
fig|6666666.67480.peg.924 CDS gi|543386950|gb|AVFF01000030.1| 35511 35873 3 + 363 Transcriptional regulator, GntR family - none -
fig|6666666.67480.peg.925 CDS gi|543386950|gb|AVFF01000030.1| 35893 36282 1 + 390 hypothetical protein - none -
fig|6666666.67480.peg.926 CDS gi|543386950|gb|AVFF01000030.1| 36365 37033 2 + 669 hypothetical protein - none -
fig|6666666.67480.peg.927 CDS gi|543386950|gb|AVFF01000030.1| 37208 37996 2 + 789 hypothetical protein - none -
fig|6666666.67480.peg.928 CDS gi|543386950|gb|AVFF01000030.1| 39917 38001 -2 - 1917 hypothetical protein - none -
fig|6666666.67480.peg.929 CDS gi|543386950|gb|AVFF01000030.1| 42253 41888 -1 - 366 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.67480.peg.930 CDS gi|543386950|gb|AVFF01000030.1| 43568 42480 -2 - 1089 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67480.peg.931 CDS gi|543386950|gb|AVFF01000030.1| 43969 43565 -1 - 405 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67480.peg.932 CDS gi|543386950|gb|AVFF01000030.1| 45026 44016 -2 - 1011 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.933 CDS gi|543386950|gb|AVFF01000030.1| 45300 45827 3 + 528 Putative membrane protein - none -
fig|6666666.67480.peg.934 CDS gi|543386950|gb|AVFF01000030.1| 46129 45836 -1 - 294 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.935 CDS gi|543386950|gb|AVFF01000030.1| 47040 46222 -3 - 819 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.936 CDS gi|543386950|gb|AVFF01000030.1| 47231 47022 -2 - 210 hypothetical protein - none -
fig|6666666.67480.peg.937 CDS gi|543386950|gb|AVFF01000030.1| 47540 47247 -2 - 294 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67480.peg.938 CDS gi|543386950|gb|AVFF01000030.1| 48876 47635 -3 - 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67480.peg.939 CDS gi|543386950|gb|AVFF01000030.1| 48969 49952 3 + 984 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67480.peg.940 CDS gi|543386950|gb|AVFF01000030.1| 50452 50303 -1 - 150 hypothetical protein - none -
fig|6666666.67480.peg.941 CDS gi|543386950|gb|AVFF01000030.1| 51971 50778 -2 - 1194 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.67480.peg.942 CDS gi|543386950|gb|AVFF01000030.1| 53512 52004 -1 - 1509 FIG00546199: hypothetical protein - none -
fig|6666666.67480.peg.943 CDS gi|543386950|gb|AVFF01000030.1| 53652 54737 3 + 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.67480.peg.944 CDS gi|543386950|gb|AVFF01000030.1| 54773 55477 2 + 705 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.67480.peg.945 CDS gi|543386950|gb|AVFF01000030.1| 55493 56245 2 + 753 hypothetical protein - none -
fig|6666666.67480.peg.946 CDS gi|543386950|gb|AVFF01000030.1| 56406 56242 -3 - 165 hypothetical protein - none -
fig|6666666.67480.peg.947 CDS gi|543386950|gb|AVFF01000030.1| 56891 57052 2 + 162 hypothetical protein - none -
fig|6666666.67480.peg.948 CDS gi|543386950|gb|AVFF01000030.1| 57148 57915 1 + 768 FIG00545841: hypothetical protein - none -
fig|6666666.67480.peg.949 CDS gi|543386950|gb|AVFF01000030.1| 58582 57956 -1 - 627 FIG00544603: hypothetical protein - none -
fig|6666666.67480.peg.950 CDS gi|543386950|gb|AVFF01000030.1| 59348 58602 -2 - 747 FIG00544264: hypothetical protein - none -
fig|6666666.67480.peg.951 CDS gi|543386950|gb|AVFF01000030.1| 59578 59724 1 + 147 hypothetical protein - none -
fig|6666666.67480.peg.952 CDS gi|543386950|gb|AVFF01000030.1| 59796 61700 3 + 1905 GTP-binding protein TypA/BipA - none -
fig|6666666.67480.peg.953 CDS gi|543386950|gb|AVFF01000030.1| 61791 63608 3 + 1818 LpqW - none -
fig|6666666.67480.peg.954 CDS gi|543386950|gb|AVFF01000030.1| 63693 64544 3 + 852 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67480.peg.955 CDS gi|543386950|gb|AVFF01000030.1| 64706 64906 2 + 201 hypothetical protein - none -
fig|6666666.67480.peg.956 CDS gi|543386950|gb|AVFF01000030.1| 64929 65261 3 + 333 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.67480.peg.957 CDS gi|543386950|gb|AVFF01000030.1| 65347 66441 1 + 1095 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.958 CDS gi|543386950|gb|AVFF01000030.1| 66471 67040 3 + 570 FIG00544080: hypothetical protein - none -
fig|6666666.67480.peg.959 CDS gi|543386950|gb|AVFF01000030.1| 68066 67095 -2 - 972 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.960 CDS gi|543386950|gb|AVFF01000030.1| 69602 68196 -2 - 1407 Phenylalanine-specific permease - none -
fig|6666666.67480.peg.961 CDS gi|543386950|gb|AVFF01000030.1| 69879 71129 3 + 1251 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.962 CDS gi|543386950|gb|AVFF01000030.1| 71131 72033 1 + 903 hypothetical protein - none -
fig|6666666.67480.peg.963 CDS gi|543386950|gb|AVFF01000030.1| 72026 72850 2 + 825 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.67480.peg.964 CDS gi|543386950|gb|AVFF01000030.1| 72868 73704 1 + 837 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.67480.peg.965 CDS gi|543386950|gb|AVFF01000030.1| 73766 74119 2 + 354 hypothetical protein - none -
fig|6666666.67480.peg.966 CDS gi|543386950|gb|AVFF01000030.1| 74133 75014 3 + 882 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67480.peg.967 CDS gi|543386950|gb|AVFF01000030.1| 76531 75056 -1 - 1476 levanase/invertase - none -
fig|6666666.67480.peg.968 CDS gi|543386950|gb|AVFF01000030.1| 77316 76642 -3 - 675 FIG00945644: hypothetical protein - none -
fig|6666666.67480.peg.969 CDS gi|543386950|gb|AVFF01000030.1| 77591 78217 2 + 627 RNA polymerase sigma-70 factor CBSS-313593.3.peg.2729;
Transcription initiation, bacterial sigma factors
fig|6666666.67480.peg.970 CDS gi|543386950|gb|AVFF01000030.1| 78508 78392 -1 - 117 hypothetical protein - none -
fig|6666666.67480.peg.971 CDS gi|543386950|gb|AVFF01000030.1| 78678 78833 3 + 156 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67480.peg.972 CDS gi|543386950|gb|AVFF01000030.1| 78814 79251 1 + 438 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67480.peg.973 CDS gi|543386950|gb|AVFF01000030.1| 80445 79321 -3 - 1125 Mrp protein homolog - none -
fig|6666666.67480.peg.974 CDS gi|543386950|gb|AVFF01000030.1| 80510 81256 2 + 747 hypothetical protein - none -
fig|6666666.67480.peg.975 CDS gi|543386950|gb|AVFF01000030.1| 85379 81591 -2 - 3789 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67480.peg.976 CDS gi|543386950|gb|AVFF01000030.1| 85593 87170 3 + 1578 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67480.peg.977 CDS gi|543386950|gb|AVFF01000030.1| 87195 87890 3 + 696 FIG00544678: hypothetical protein - none -
fig|6666666.67480.peg.978 CDS gi|543386950|gb|AVFF01000030.1| 88128 87952 -3 - 177 hypothetical protein - none -
fig|6666666.67480.peg.979 CDS gi|543386950|gb|AVFF01000030.1| 88580 89836 2 + 1257 putative multidrug resistance protein - none -
fig|6666666.67480.peg.980 CDS gi|543386950|gb|AVFF01000030.1| 90493 89840 -1 - 654 Formiminoglutamase (EC 3.5.3.8) Histidine Degradation
fig|6666666.67480.peg.981 CDS gi|543386950|gb|AVFF01000030.1| 90735 90562 -3 - 174 hypothetical protein - none -
fig|6666666.67480.peg.982 CDS gi|543386950|gb|AVFF01000030.1| 90902 92857 2 + 1956 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67480.peg.983 CDS gi|543386950|gb|AVFF01000030.1| 93488 93015 -2 - 474 hypothetical membrane protein - none -
fig|6666666.67480.peg.984 CDS gi|543386950|gb|AVFF01000030.1| 94351 93557 -1 - 795 hypothetical protein - none -
fig|6666666.67480.peg.985 CDS gi|543386950|gb|AVFF01000030.1| 96126 94555 -3 - 1572 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67480.peg.986 CDS gi|543386950|gb|AVFF01000030.1| 96711 99605 3 + 2895 Helicase, SNF2/RAD54 family - none -
fig|6666666.67480.peg.987 CDS gi|543386950|gb|AVFF01000030.1| 99608 100480 2 + 873 FIG00545674: hypothetical protein - none -
fig|6666666.67480.peg.988 CDS gi|543386950|gb|AVFF01000030.1| 100510 101700 1 + 1191 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67480.peg.989 CDS gi|543386950|gb|AVFF01000030.1| 101697 102506 3 + 810 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67480.peg.990 CDS gi|543386950|gb|AVFF01000030.1| 102616 104607 1 + 1992 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67480.peg.991 CDS gi|543386950|gb|AVFF01000030.1| 104728 104612 -1 - 117 hypothetical protein - none -
fig|6666666.67480.peg.992 CDS gi|543386950|gb|AVFF01000030.1| 104696 105217 2 + 522 Transcriptional regulator, MarR family - none -
fig|6666666.67480.peg.993 CDS gi|543386950|gb|AVFF01000030.1| 107096 105480 -2 - 1617 predicted hydrolase or acyltransferase - none -
fig|6666666.67480.peg.994 CDS gi|543386950|gb|AVFF01000030.1| 107276 108928 2 + 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67480.peg.995 CDS gi|543386950|gb|AVFF01000030.1| 108933 110288 3 + 1356 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.996 CDS gi|543386950|gb|AVFF01000030.1| 110502 111833 3 + 1332 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67480.peg.997 CDS gi|543386950|gb|AVFF01000030.1| 111858 112496 3 + 639 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67480.peg.998 CDS gi|543386950|gb|AVFF01000030.1| 112502 112786 2 + 285 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67480.peg.999 CDS gi|543386950|gb|AVFF01000030.1| 114909 112951 -3 - 1959 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67480.peg.1000 CDS gi|543386950|gb|AVFF01000030.1| 115754 114933 -2 - 822 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67480.peg.1001 CDS gi|543386950|gb|AVFF01000030.1| 116731 115778 -1 - 954 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67480.peg.1002 CDS gi|543386950|gb|AVFF01000030.1| 117462 117199 -3 - 264 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67480.peg.1003 CDS gi|543386950|gb|AVFF01000030.1| 117731 118996 2 + 1266 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67480.peg.1004 CDS gi|543386950|gb|AVFF01000030.1| 119176 120717 1 + 1542 major facilitator superfamily MFS_1 - none -
fig|6666666.67480.peg.1005 CDS gi|543386950|gb|AVFF01000030.1| 120853 121422 1 + 570 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67480.peg.1006 CDS gi|543386950|gb|AVFF01000030.1| 121469 121903 2 + 435 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67480.peg.1007 CDS gi|543386950|gb|AVFF01000030.1| 121962 123116 3 + 1155 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67480.peg.1008 CDS gi|543386950|gb|AVFF01000030.1| 123828 123181 -3 - 648 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.67480.peg.1009 CDS gi|543386950|gb|AVFF01000030.1| 124336 123857 -1 - 480 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67480.peg.1010 CDS gi|543386950|gb|AVFF01000030.1| 125728 124361 -1 - 1368 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67480.peg.1011 CDS gi|543386950|gb|AVFF01000030.1| 126862 125744 -1 - 1119 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67480.peg.1012 CDS gi|543386950|gb|AVFF01000030.1| 128740 126923 -1 - 1818 acyl-CoA synthetase - none -
fig|6666666.67480.peg.1013 CDS gi|543386950|gb|AVFF01000030.1| 129208 128990 -1 - 219 hypothetical protein - none -
fig|6666666.67480.peg.1014 CDS gi|543386950|gb|AVFF01000030.1| 129174 131333 3 + 2160 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67480.peg.1015 CDS gi|543386950|gb|AVFF01000030.1| 131337 132410 3 + 1074 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67480.peg.1016 CDS gi|543386950|gb|AVFF01000030.1| 132414 133304 3 + 891 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67480.peg.1017 CDS gi|543386950|gb|AVFF01000030.1| 133370 134101 2 + 732 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67480.peg.1018 CDS gi|543386950|gb|AVFF01000030.1| 134101 135276 1 + 1176 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67480.peg.1019 CDS gi|543386950|gb|AVFF01000030.1| 135528 135887 3 + 360 ATP synthase protein I - none -
fig|6666666.67480.peg.1020 CDS gi|543386950|gb|AVFF01000030.1| 136253 137056 2 + 804 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1021 CDS gi|543386950|gb|AVFF01000030.1| 137151 137387 3 + 237 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1022 CDS gi|543386950|gb|AVFF01000030.1| 137433 138002 3 + 570 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1023 CDS gi|543386950|gb|AVFF01000030.1| 138009 138836 3 + 828 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1024 CDS gi|543386950|gb|AVFF01000030.1| 138917 140557 2 + 1641 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1025 CDS gi|543386950|gb|AVFF01000030.1| 140615 141589 2 + 975 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1026 CDS gi|543386950|gb|AVFF01000030.1| 141593 143044 2 + 1452 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1027 CDS gi|543386950|gb|AVFF01000030.1| 143061 143432 3 + 372 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67480.peg.1028 CDS gi|543386950|gb|AVFF01000030.1| 143917 144051 1 + 135 hypothetical protein - none -
fig|6666666.67480.peg.1029 CDS gi|543386950|gb|AVFF01000030.1| 144062 144754 2 + 693 FIG00996186: hypothetical protein - none -
fig|6666666.67480.peg.1030 CDS gi|543386950|gb|AVFF01000030.1| 145032 145448 3 + 417 FIG00544011: hypothetical protein - none -
fig|6666666.67480.peg.1031 CDS gi|543386950|gb|AVFF01000030.1| 145572 146636 3 + 1065 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67480.peg.1032 CDS gi|543386950|gb|AVFF01000030.1| 146913 148661 3 + 1749 FIG00996530: hypothetical protein - none -
fig|6666666.67480.peg.1033 CDS gi|543386950|gb|AVFF01000030.1| 148851 149231 3 + 381 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67480.peg.1034 CDS gi|543386950|gb|AVFF01000030.1| 149260 149664 1 + 405 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67480.peg.1035 CDS gi|543386950|gb|AVFF01000030.1| 149692 150657 1 + 966 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67480.peg.1036 CDS gi|543386950|gb|AVFF01000030.1| 150731 151852 2 + 1122 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67480.peg.1037 CDS gi|543386950|gb|AVFF01000030.1| 152703 152125 -3 - 579 Spermidine synthase-like protein - none -
fig|6666666.67480.peg.1038 CDS gi|543386950|gb|AVFF01000030.1| 152824 153897 1 + 1074 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67480.peg.1039 CDS gi|543386950|gb|AVFF01000030.1| 153918 155027 3 + 1110 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67480.peg.1040 CDS gi|543386950|gb|AVFF01000030.1| 155299 155024 -1 - 276 hypothetical protein - none -
fig|6666666.67480.peg.1041 CDS gi|543386950|gb|AVFF01000030.1| 155559 155299 -3 - 261 hypothetical protein - none -
fig|6666666.67480.peg.1042 CDS gi|543386950|gb|AVFF01000030.1| 156311 155583 -2 - 729 Beta-lactamase Beta-lactamase
fig|6666666.67480.peg.1043 CDS gi|543386950|gb|AVFF01000030.1| 156999 156328 -3 - 672 FIG00544413: hypothetical protein - none -
fig|6666666.67480.peg.1044 CDS gi|543386950|gb|AVFF01000030.1| 157088 159172 2 + 2085 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67480.peg.1045 CDS gi|543386950|gb|AVFF01000030.1| 159831 159169 -3 - 663 FIG00544014: hypothetical protein - none -
fig|6666666.67480.peg.1046 CDS gi|543386950|gb|AVFF01000030.1| 160028 160318 2 + 291 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67480.peg.1047 CDS gi|543386950|gb|AVFF01000030.1| 160379 161866 2 + 1488 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67480.peg.1048 CDS gi|543386950|gb|AVFF01000030.1| 162258 161935 -3 - 324 Conserved putative integral membrane protein - none -
fig|6666666.67480.peg.1049 CDS gi|543386950|gb|AVFF01000030.1| 162307 163737 1 + 1431 permease of the major facilitator superfamily - none -
fig|6666666.67480.peg.1050 CDS gi|543387126|gb|AVFF01000029.1| 541 1782 1 + 1242 putative lipoprotein - none -
fig|6666666.67480.peg.1051 CDS gi|543387126|gb|AVFF01000029.1| 1866 4301 3 + 2436 ATP-dependent helicase HrpB - none -
fig|6666666.67480.peg.1052 CDS gi|543387126|gb|AVFF01000029.1| 4973 4305 -2 - 669 hypothetical protein - none -
fig|6666666.67480.peg.1053 CDS gi|543387126|gb|AVFF01000029.1| 5903 5220 -2 - 684 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67480.peg.1054 CDS gi|543387126|gb|AVFF01000029.1| 6414 6004 -3 - 411 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.67480.peg.1055 CDS gi|543387126|gb|AVFF01000029.1| 6802 6479 -1 - 324 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.67480.peg.1056 CDS gi|543387126|gb|AVFF01000029.1| 7146 9425 3 + 2280 Copper resistance protein D Copper homeostasis
fig|6666666.67480.peg.1057 CDS gi|543387126|gb|AVFF01000029.1| 9492 10493 3 + 1002 Putative secreted hydrolase - none -
fig|6666666.67480.peg.1058 CDS gi|543387126|gb|AVFF01000029.1| 10735 11295 1 + 561 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67480.peg.1059 CDS gi|543387126|gb|AVFF01000029.1| 11414 13084 2 + 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.1060 CDS gi|543387126|gb|AVFF01000029.1| 13137 13745 3 + 609 FIG00544139: hypothetical protein - none -
fig|6666666.67480.peg.1061 CDS gi|543387126|gb|AVFF01000029.1| 13745 14446 2 + 702 FIG00545013: hypothetical protein - none -
fig|6666666.67480.peg.1062 CDS gi|543387126|gb|AVFF01000029.1| 14644 15708 1 + 1065 hypothetical protein - none -
fig|6666666.67480.peg.1063 CDS gi|543387126|gb|AVFF01000029.1| 15772 16704 1 + 933 hypothetical protein - none -
fig|6666666.67480.peg.1064 CDS gi|543387126|gb|AVFF01000029.1| 17022 16831 -3 - 192 hypothetical protein - none -
fig|6666666.67480.peg.1065 CDS gi|543387126|gb|AVFF01000029.1| 17477 17229 -2 - 249 hypothetical protein - none -
fig|6666666.67480.peg.1066 CDS gi|543387126|gb|AVFF01000029.1| 19486 17645 -1 - 1842 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.67480.peg.1067 CDS gi|543387126|gb|AVFF01000029.1| 19672 19550 -1 - 123 hypothetical protein - none -
fig|6666666.67480.peg.1068 CDS gi|543387126|gb|AVFF01000029.1| 19829 20917 2 + 1089 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.67480.peg.1069 CDS gi|543387126|gb|AVFF01000029.1| 21141 20986 -3 - 156 Mobile element protein - none -
fig|6666666.67480.peg.1070 CDS gi|543387166|gb|AVFF01000028.1| 42 2966 3 + 2925 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67480.peg.1071 CDS gi|543387166|gb|AVFF01000028.1| 3049 3927 1 + 879 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67480.peg.1072 CDS gi|543387166|gb|AVFF01000028.1| 3915 7043 3 + 3129 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67480.peg.1073 CDS gi|543387166|gb|AVFF01000028.1| 7390 8013 1 + 624 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Thiamin biosynthesis
fig|6666666.67480.peg.1074 CDS gi|543387166|gb|AVFF01000028.1| 8074 9486 1 + 1413 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine - none -
fig|6666666.67480.peg.1075 CDS gi|543387166|gb|AVFF01000028.1| 9488 10291 2 + 804 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Thiamin biosynthesis
fig|6666666.67480.peg.1076 CDS gi|543387166|gb|AVFF01000028.1| 10281 10400 3 + 120 hypothetical protein - none -
fig|6666666.67480.peg.1077 CDS gi|543387166|gb|AVFF01000028.1| 10746 11114 3 + 369 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67480.peg.1078 CDS gi|543387166|gb|AVFF01000028.1| 11121 11588 3 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67480.peg.1079 CDS gi|543387166|gb|AVFF01000028.1| 11887 14019 1 + 2133 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.67480.peg.1080 CDS gi|543387166|gb|AVFF01000028.1| 14537 15691 2 + 1155 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.67480.peg.1081 CDS gi|543387166|gb|AVFF01000028.1| 16639 16520 -1 - 120 hypothetical protein - none -
fig|6666666.67480.peg.1082 CDS gi|543387166|gb|AVFF01000028.1| 16934 16800 -2 - 135 hypothetical protein - none -
fig|6666666.67480.peg.1083 CDS gi|543387166|gb|AVFF01000028.1| 17702 17139 -2 - 564 hypothetical protein - none -
fig|6666666.67480.peg.1084 CDS gi|543387166|gb|AVFF01000028.1| 18256 17699 -1 - 558 hypothetical protein - none -
fig|6666666.67480.peg.1085 CDS gi|543387166|gb|AVFF01000028.1| 19677 18493 -3 - 1185 hypothetical protein - none -
fig|6666666.67480.peg.1086 CDS gi|543387166|gb|AVFF01000028.1| 19865 19677 -2 - 189 hypothetical protein - none -
fig|6666666.67480.peg.1087 CDS gi|543387166|gb|AVFF01000028.1| 20227 19889 -1 - 339 hypothetical protein - none -
fig|6666666.67480.peg.1088 CDS gi|543387166|gb|AVFF01000028.1| 20706 20230 -3 - 477 Alkaline shock protein 23 - none -
fig|6666666.67480.peg.1089 CDS gi|543387204|gb|AVFF01000027.1| 497 177 -2 - 321 hypothetical protein - none -
fig|6666666.67480.peg.1090 CDS gi|543387204|gb|AVFF01000027.1| 633 968 3 + 336 FMN reductase, NADPH-dependent - none -
fig|6666666.67480.peg.1091 CDS gi|543387204|gb|AVFF01000027.1| 1058 1249 2 + 192 FMN reductase, NADPH-dependent - none -
fig|6666666.67480.peg.1092 CDS gi|543387204|gb|AVFF01000027.1| 1302 2474 3 + 1173 two-component system sensor kinase - none -
fig|6666666.67480.peg.1093 CDS gi|543387204|gb|AVFF01000027.1| 2492 3199 2 + 708 putative two-component system response regulator - none -
fig|6666666.67480.peg.1094 CDS gi|543387204|gb|AVFF01000027.1| 3346 4278 1 + 933 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.1095 CDS gi|543387204|gb|AVFF01000027.1| 4282 5013 1 + 732 Putative ABC transport system membrane protein - none -
fig|6666666.67480.peg.1096 CDS gi|543387204|gb|AVFF01000027.1| 5998 5060 -1 - 939 hypothetical protein - none -
fig|6666666.67480.peg.1097 CDS gi|543387204|gb|AVFF01000027.1| 6271 7353 1 + 1083 hypothetical protein - none -
fig|6666666.67480.peg.1098 CDS gi|543387204|gb|AVFF01000027.1| 7323 7595 3 + 273 hypothetical protein - none -
fig|6666666.67480.peg.1099 CDS gi|543387204|gb|AVFF01000027.1| 8697 7624 -3 - 1074 hypothetical protein - none -
fig|6666666.67480.peg.1100 CDS gi|543387204|gb|AVFF01000027.1| 8776 9021 1 + 246 YefM protein (antitoxin to YoeB) - none -
fig|6666666.67480.peg.1101 CDS gi|543387204|gb|AVFF01000027.1| 11191 9119 -1 - 2073 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67480.peg.1102 CDS gi|543387204|gb|AVFF01000027.1| 11160 11318 3 + 159 hypothetical protein - none -
fig|6666666.67480.peg.1103 CDS gi|543387204|gb|AVFF01000027.1| 11500 12906 1 + 1407 Integral membrane protein - none -
fig|6666666.67480.peg.1104 CDS gi|543387204|gb|AVFF01000027.1| 12912 13043 3 + 132 hypothetical protein - none -
fig|6666666.67480.peg.1105 CDS gi|543387204|gb|AVFF01000027.1| 13040 13441 2 + 402 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.1106 CDS gi|543387204|gb|AVFF01000027.1| 13443 13751 3 + 309 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.1107 CDS gi|543387204|gb|AVFF01000027.1| 13925 14041 2 + 117 hypothetical protein - none -
fig|6666666.67480.peg.1108 CDS gi|543387204|gb|AVFF01000027.1| 14509 14727 1 + 219 hypothetical protein - none -
fig|6666666.67480.peg.1109 CDS gi|543387204|gb|AVFF01000027.1| 15500 16042 2 + 543 DNA polymerase III, epsilon subunit - none -
fig|6666666.67480.peg.1110 CDS gi|543387204|gb|AVFF01000027.1| 16172 16339 2 + 168 hypothetical protein - none -
fig|6666666.67480.peg.1111 CDS gi|543387204|gb|AVFF01000027.1| 16516 17568 1 + 1053 hypothetical protein - none -
fig|6666666.67480.peg.1112 CDS gi|543387204|gb|AVFF01000027.1| 17558 18547 2 + 990 hypothetical protein - none -
fig|6666666.67480.peg.1113 CDS gi|543387204|gb|AVFF01000027.1| 18549 20621 3 + 2073 hypothetical protein - none -
fig|6666666.67480.peg.1114 CDS gi|543387204|gb|AVFF01000027.1| 21011 21199 2 + 189 Putative tranposase - none -
fig|6666666.67480.peg.1115 CDS gi|543387259|gb|AVFF01000025.1| 1047 259 -3 - 789 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67480.peg.1116 CDS gi|543387259|gb|AVFF01000025.1| 2448 1129 -3 - 1320 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67480.peg.1117 CDS gi|543387259|gb|AVFF01000025.1| 2691 4409 3 + 1719 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.1118 CDS gi|543387259|gb|AVFF01000025.1| 4865 4746 -2 - 120 hypothetical protein - none -
fig|6666666.67480.peg.1119 CDS gi|543387259|gb|AVFF01000025.1| 4884 6692 3 + 1809 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.1120 CDS gi|543387259|gb|AVFF01000025.1| 6949 8736 1 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.1121 CDS gi|543387259|gb|AVFF01000025.1| 8986 18294 1 + 9309 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67480.peg.1122 CDS gi|543387259|gb|AVFF01000025.1| 18505 18392 -1 - 114 hypothetical protein - none -
fig|6666666.67480.peg.1123 CDS gi|543387259|gb|AVFF01000025.1| 18464 21763 2 + 3300 CRISPR-associated protein, Csn1 family CRISPRs
fig|6666666.67480.peg.1124 CDS gi|543387259|gb|AVFF01000025.1| 21766 22680 1 + 915 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.67480.peg.1125 CDS gi|543387259|gb|AVFF01000025.1| 22688 22993 2 + 306 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.67480.peg.1126 CDS gi|543387269|gb|AVFF01000024.1| 4668 1204 -3 - 3465 Conserved putative integral membrane protein - none -
fig|6666666.67480.peg.1127 CDS gi|543387269|gb|AVFF01000024.1| 4885 4676 -1 - 210 hypothetical protein - none -
fig|6666666.67480.peg.1128 CDS gi|543387269|gb|AVFF01000024.1| 5442 4927 -3 - 516 FIG00545938: hypothetical protein - none -
fig|6666666.67480.peg.1129 CDS gi|543387269|gb|AVFF01000024.1| 5559 7211 3 + 1653 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67480.peg.1130 CDS gi|543387269|gb|AVFF01000024.1| 7275 7838 3 + 564 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) - none -
fig|6666666.67480.peg.1131 CDS gi|543387269|gb|AVFF01000024.1| 7879 9273 1 + 1395 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67480.peg.1132 CDS gi|543387269|gb|AVFF01000024.1| 9672 10154 3 + 483 Putative bacterioferritin - none -
fig|6666666.67480.peg.1133 CDS gi|543387269|gb|AVFF01000024.1| 10307 11482 2 + 1176 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67480.peg.1134 CDS gi|543387269|gb|AVFF01000024.1| 11888 11466 -2 - 423 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) - none -
fig|6666666.67480.peg.1135 CDS gi|543387269|gb|AVFF01000024.1| 12648 15185 3 + 2538 hypothetical protein - none -
fig|6666666.67480.peg.1136 CDS gi|543387269|gb|AVFF01000024.1| 15458 16441 2 + 984 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.67480.peg.1137 CDS gi|543387269|gb|AVFF01000024.1| 16492 17205 1 + 714 hypothetical protein - none -
fig|6666666.67480.peg.1138 CDS gi|543387269|gb|AVFF01000024.1| 17165 18844 2 + 1680 hypothetical protein - none -
fig|6666666.67480.peg.1139 CDS gi|543387269|gb|AVFF01000024.1| 18927 20057 3 + 1131 hypothetical protein - none -
fig|6666666.67480.peg.1140 CDS gi|543387269|gb|AVFF01000024.1| 20230 21072 1 + 843 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67480.peg.1141 CDS gi|543387269|gb|AVFF01000024.1| 21163 21942 1 + 780 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67480.peg.1142 CDS gi|543387269|gb|AVFF01000024.1| 21956 22123 2 + 168 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) @ ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin;
Siderophore Enterobactin
fig|6666666.67480.peg.1143 CDS gi|543387269|gb|AVFF01000024.1| 22113 22940 3 + 828 ABC transporter - none -
fig|6666666.67480.peg.1144 CDS gi|543387269|gb|AVFF01000024.1| 22943 23608 2 + 666 Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
NAD and NADP cofactor biosynthesis global
fig|6666666.67480.peg.1145 CDS gi|543387269|gb|AVFF01000024.1| 23605 24762 1 + 1158 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67480.peg.1146 CDS gi|543387269|gb|AVFF01000024.1| 24752 26344 2 + 1593 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58) - none -
fig|6666666.67480.peg.1147 CDS gi|543387269|gb|AVFF01000024.1| 26381 26650 2 + 270 Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
NAD and NADP cofactor biosynthesis global
fig|6666666.67480.peg.1148 CDS gi|543387269|gb|AVFF01000024.1| 26656 27378 1 + 723 Siderophore biosynthesis non-ribosomal peptide synthetase modules - none -
fig|6666666.67480.peg.1149 CDS gi|543387269|gb|AVFF01000024.1| 27360 29423 3 + 2064 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.1150 CDS gi|543387295|gb|AVFF01000023.1| 2301 2414 3 + 114 hypothetical protein - none -
fig|6666666.67480.peg.1151 CDS gi|543387295|gb|AVFF01000023.1| 4314 2578 -3 - 1737 FIG00544558: hypothetical protein - none -
fig|6666666.67480.peg.1152 CDS gi|543387295|gb|AVFF01000023.1| 4506 5753 3 + 1248 possible transcriptional regulator, ROK family - none -
fig|6666666.67480.peg.1153 CDS gi|543387295|gb|AVFF01000023.1| 6328 5810 -1 - 519 carbonic anhydrase, family 3 - none -
fig|6666666.67480.peg.1154 CDS gi|543387295|gb|AVFF01000023.1| 6988 6368 -1 - 621 hypothetical protein - none -
fig|6666666.67480.peg.1155 CDS gi|543387295|gb|AVFF01000023.1| 7460 7035 -2 - 426 putative membrane protein - none -
fig|6666666.67480.peg.1156 CDS gi|543387295|gb|AVFF01000023.1| 7816 9774 1 + 1959 FIG01124361: hypothetical protein - none -
fig|6666666.67480.peg.1157 CDS gi|543387295|gb|AVFF01000023.1| 9883 10986 1 + 1104 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.1158 CDS gi|543387295|gb|AVFF01000023.1| 10967 12097 2 + 1131 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.1159 CDS gi|543387295|gb|AVFF01000023.1| 12097 12912 1 + 816 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.1160 CDS gi|543387295|gb|AVFF01000023.1| 13110 14336 3 + 1227 FIG00545097: hypothetical protein - none -
fig|6666666.67480.peg.1161 CDS gi|543387295|gb|AVFF01000023.1| 15842 14556 -2 - 1287 hypothetical protein - none -
fig|6666666.67480.peg.1162 CDS gi|543387295|gb|AVFF01000023.1| 18616 16307 -1 - 2310 hypothetical protein - none -
fig|6666666.67480.peg.1163 CDS gi|543387295|gb|AVFF01000023.1| 19810 18806 -1 - 1005 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67480.peg.1164 CDS gi|543387295|gb|AVFF01000023.1| 20272 19814 -1 - 459 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67480.peg.1165 CDS gi|543387295|gb|AVFF01000023.1| 20965 22209 1 + 1245 FIG00543870: hypothetical protein - none -
fig|6666666.67480.peg.1166 CDS gi|543387295|gb|AVFF01000023.1| 23241 22276 -3 - 966 NAD-dependent protein deacetylase of SIR2 family Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.1167 CDS gi|543387295|gb|AVFF01000023.1| 23634 23329 -3 - 306 hypothetical protein - none -
fig|6666666.67480.peg.1168 CDS gi|543387295|gb|AVFF01000023.1| 23951 23646 -2 - 306 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67480.peg.1169 CDS gi|543387295|gb|AVFF01000023.1| 24643 23948 -1 - 696 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67480.peg.1170 CDS gi|543387295|gb|AVFF01000023.1| 24764 25543 2 + 780 hypothetical protein - none -
fig|6666666.67480.peg.1171 CDS gi|543387295|gb|AVFF01000023.1| 25580 26293 2 + 714 FIG016551: Putative peptidase - none -
fig|6666666.67480.peg.1172 CDS gi|543387295|gb|AVFF01000023.1| 26317 26919 1 + 603 FIG016551: Putative peptidase - none -
fig|6666666.67480.peg.1173 CDS gi|543387295|gb|AVFF01000023.1| 27922 26927 -1 - 996 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.1174 CDS gi|543387295|gb|AVFF01000023.1| 28993 27983 -1 - 1011 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.1175 CDS gi|543387295|gb|AVFF01000023.1| 29753 29070 -2 - 684 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.1176 CDS gi|543387323|gb|AVFF01000022.1| 587 790 2 + 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67480.peg.1177 CDS gi|543387323|gb|AVFF01000022.1| 1017 4106 3 + 3090 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67480.peg.1178 CDS gi|543387323|gb|AVFF01000022.1| 6982 5456 -1 - 1527 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67480.peg.1179 CDS gi|543387323|gb|AVFF01000022.1| 7026 8411 3 + 1386 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67480.peg.1180 CDS gi|543387323|gb|AVFF01000022.1| 9671 9381 -2 - 291 hypothetical protein - none -
fig|6666666.67480.peg.1181 CDS gi|543387323|gb|AVFF01000022.1| 12194 10551 -2 - 1644 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.1182 CDS gi|543387323|gb|AVFF01000022.1| 12438 13625 3 + 1188 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.67480.peg.1183 CDS gi|543387323|gb|AVFF01000022.1| 13629 14246 3 + 618 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.67480.peg.1184 CDS gi|543387323|gb|AVFF01000022.1| 15219 14359 -3 - 861 putative cytochrome c biogenesis protein - none -
fig|6666666.67480.peg.1185 CDS gi|543387323|gb|AVFF01000022.1| 16178 15237 -2 - 942 Putative secreted protein - none -
fig|6666666.67480.peg.1186 CDS gi|543387323|gb|AVFF01000022.1| 17096 16230 -2 - 867 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67480.peg.1187 CDS gi|543387323|gb|AVFF01000022.1| 18467 17103 -2 - 1365 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.67480.peg.1188 CDS gi|543387323|gb|AVFF01000022.1| 19478 18483 -2 - 996 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67480.peg.1189 CDS gi|543387323|gb|AVFF01000022.1| 20827 19703 -1 - 1125 surface layer protein A - none -
fig|6666666.67480.peg.1190 CDS gi|543387323|gb|AVFF01000022.1| 21313 21426 1 + 114 hypothetical protein - none -
fig|6666666.67480.peg.1191 CDS gi|543387323|gb|AVFF01000022.1| 21620 23047 2 + 1428 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) TCA Cycle
fig|6666666.67480.peg.1192 CDS gi|543387323|gb|AVFF01000022.1| 23402 24157 2 + 756 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67480.peg.1193 CDS gi|543387323|gb|AVFF01000022.1| 24224 26233 2 + 2010 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.67480.peg.1194 CDS gi|543387323|gb|AVFF01000022.1| 26233 26982 1 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.67480.peg.1195 CDS gi|543387323|gb|AVFF01000022.1| 27121 27489 1 + 369 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.67480.peg.1196 CDS gi|543387323|gb|AVFF01000022.1| 27746 27540 -2 - 207 hypothetical protein - none -
fig|6666666.67480.peg.1197 CDS gi|543387323|gb|AVFF01000022.1| 27805 28998 1 + 1194 FIG00544632: hypothetical protein - none -
fig|6666666.67480.peg.1198 CDS gi|543387323|gb|AVFF01000022.1| 29093 29530 2 + 438 hypothetical protein - none -
fig|6666666.67480.peg.1199 CDS gi|543387323|gb|AVFF01000022.1| 29644 30033 1 + 390 hypothetical membrane protein - none -
fig|6666666.67480.peg.1200 CDS gi|543387323|gb|AVFF01000022.1| 30080 30955 2 + 876 hypothetical protein - none -
fig|6666666.67480.peg.1201 CDS gi|543387323|gb|AVFF01000022.1| 31877 30987 -2 - 891 hypothetical protein - none -
fig|6666666.67480.peg.1202 CDS gi|543387323|gb|AVFF01000022.1| 32398 31907 -1 - 492 FIG00546961: hypothetical protein - none -
fig|6666666.67480.peg.1203 CDS gi|543387323|gb|AVFF01000022.1| 32437 33333 1 + 897 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67480.peg.1204 CDS gi|543387323|gb|AVFF01000022.1| 33293 33607 2 + 315 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67480.peg.1205 CDS gi|543387323|gb|AVFF01000022.1| 34145 33642 -2 - 504 hypothetical protein - none -
fig|6666666.67480.peg.1206 CDS gi|543387323|gb|AVFF01000022.1| 35429 34191 -2 - 1239 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67480.peg.1207 CDS gi|543387323|gb|AVFF01000022.1| 35610 36065 3 + 456 hypothetical protein - none -
fig|6666666.67480.peg.1208 CDS gi|543387323|gb|AVFF01000022.1| 37033 36068 -1 - 966 Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) Polysaccharide deacetylases
fig|6666666.67480.peg.1209 CDS gi|543387358|gb|AVFF01000021.1| 42 230 3 + 189 Mobile element protein - none -
fig|6666666.67480.peg.1210 CDS gi|543387358|gb|AVFF01000021.1| 463 1284 1 + 822 POSSIBLE METHYLTRANSFERASE (METHYLASE) (EC 2.1.1.-) - none -
fig|6666666.67480.peg.1211 CDS gi|543387358|gb|AVFF01000021.1| 1374 1667 3 + 294 hypothetical protein - none -
fig|6666666.67480.peg.1212 CDS gi|543387358|gb|AVFF01000021.1| 1927 1772 -1 - 156 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.1213 CDS gi|543387358|gb|AVFF01000021.1| 2513 2034 -2 - 480 hypothetical protein - none -
fig|6666666.67480.peg.1214 CDS gi|543387358|gb|AVFF01000021.1| 2731 2510 -1 - 222 hypothetical protein - none -
fig|6666666.67480.peg.1215 CDS gi|543387358|gb|AVFF01000021.1| 4379 2919 -2 - 1461 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.1216 CDS gi|543387358|gb|AVFF01000021.1| 5472 4450 -3 - 1023 hypothetical protein - none -
fig|6666666.67480.peg.1217 CDS gi|543387358|gb|AVFF01000021.1| 5526 6230 3 + 705 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67480.peg.1218 CDS gi|543387358|gb|AVFF01000021.1| 6788 6231 -2 - 558 reductase - none -
fig|6666666.67480.peg.1219 CDS gi|543387358|gb|AVFF01000021.1| 6929 8575 2 + 1647 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67480.peg.1220 CDS gi|543387358|gb|AVFF01000021.1| 10189 8609 -1 - 1581 hypothetical protein - none -
fig|6666666.67480.peg.1221 CDS gi|543387358|gb|AVFF01000021.1| 10776 10351 -3 - 426 hypothetical protein - none -
fig|6666666.67480.peg.1222 CDS gi|543387358|gb|AVFF01000021.1| 11206 11000 -1 - 207 Predicted esterase of the alpha-beta hydrolase superfamily - none -
fig|6666666.67480.peg.1223 CDS gi|543387358|gb|AVFF01000021.1| 11870 11229 -2 - 642 FIG00546451: hypothetical protein - none -
fig|6666666.67480.peg.1224 CDS gi|543387358|gb|AVFF01000021.1| 11946 12317 3 + 372 hypothetical protein - none -
fig|6666666.67480.peg.1225 CDS gi|543387358|gb|AVFF01000021.1| 12990 12337 -3 - 654 hypothetical membrane protein - none -
fig|6666666.67480.peg.1226 CDS gi|543387358|gb|AVFF01000021.1| 13099 14274 1 + 1176 hypothetical protein - none -
fig|6666666.67480.peg.1227 CDS gi|543387358|gb|AVFF01000021.1| 14905 14405 -1 - 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.67480.peg.1228 CDS gi|543387358|gb|AVFF01000021.1| 16200 14908 -3 - 1293 Isocitrate lyase (EC 4.1.3.1) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67480.peg.1229 CDS gi|543387358|gb|AVFF01000021.1| 16628 18847 2 + 2220 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67480.peg.1230 CDS gi|543387358|gb|AVFF01000021.1| 19391 18912 -2 - 480 hypothetical protein - none -
fig|6666666.67480.peg.1231 CDS gi|543387358|gb|AVFF01000021.1| 20712 19651 -3 - 1062 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67480.peg.1232 CDS gi|543387358|gb|AVFF01000021.1| 21172 20840 -1 - 333 hypothetical protein - none -
fig|6666666.67480.peg.1233 CDS gi|543387358|gb|AVFF01000021.1| 21727 21236 -1 - 492 hypothetical protein - none -
fig|6666666.67480.peg.1234 CDS gi|543387358|gb|AVFF01000021.1| 23648 21828 -2 - 1821 ABC transporter, ATP-binding protein - none -
fig|6666666.67480.peg.1235 CDS gi|543387358|gb|AVFF01000021.1| 23749 25110 1 + 1362 putative secreted protein - none -
fig|6666666.67480.peg.1236 CDS gi|543387358|gb|AVFF01000021.1| 26173 25112 -1 - 1062 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67480.peg.1237 CDS gi|543387358|gb|AVFF01000021.1| 27105 26191 -3 - 915 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.67480.peg.1238 CDS gi|543387358|gb|AVFF01000021.1| 28291 27125 -1 - 1167 Cell wall-binding protein - none -
fig|6666666.67480.peg.1239 CDS gi|543387358|gb|AVFF01000021.1| 29407 28568 -1 - 840 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67480.peg.1240 CDS gi|543387358|gb|AVFF01000021.1| 30791 29487 -2 - 1305 putative transport protein - none -
fig|6666666.67480.peg.1241 CDS gi|543387358|gb|AVFF01000021.1| 32703 30850 -3 - 1854 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67480.peg.1242 CDS gi|543387358|gb|AVFF01000021.1| 34751 32823 -2 - 1929 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67480.peg.1243 CDS gi|543387358|gb|AVFF01000021.1| 35670 34873 -3 - 798 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67480.peg.1244 CDS gi|543387358|gb|AVFF01000021.1| 35773 35642 -1 - 132 hypothetical protein - none -
fig|6666666.67480.peg.1245 CDS gi|543387358|gb|AVFF01000021.1| 35907 37538 3 + 1632 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67480.peg.1246 CDS gi|543387358|gb|AVFF01000021.1| 38215 37505 -1 - 711 hypothetical membrane protein - none -
fig|6666666.67480.peg.1247 CDS gi|543387358|gb|AVFF01000021.1| 38612 38202 -2 - 411 hypothetical protein - none -
fig|6666666.67480.peg.1248 CDS gi|543387358|gb|AVFF01000021.1| 38751 39422 3 + 672 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67480.peg.1249 CDS gi|543387358|gb|AVFF01000021.1| 40943 39426 -2 - 1518 Putative membrane protein - none -
fig|6666666.67480.peg.1250 CDS gi|543387358|gb|AVFF01000021.1| 41675 41049 -2 - 627 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.67480.peg.1251 CDS gi|543387358|gb|AVFF01000021.1| 43113 41809 -3 - 1305 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67480.peg.1252 CDS gi|543387358|gb|AVFF01000021.1| 44122 43151 -1 - 972 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67480.peg.1253 CDS gi|543387358|gb|AVFF01000021.1| 44845 44663 -1 - 183 hypothetical protein - none -
fig|6666666.67480.peg.1254 CDS gi|543387405|gb|AVFF01000020.1| 877 479 -1 - 399 SAM-dependent methyltransferase - none -
fig|6666666.67480.peg.1255 CDS gi|543387405|gb|AVFF01000020.1| 1371 1207 -3 - 165 hypothetical protein - none -
fig|6666666.67480.peg.1256 CDS gi|543387405|gb|AVFF01000020.1| 1335 1634 3 + 300 hypothetical protein - none -
fig|6666666.67480.peg.1257 CDS gi|543387405|gb|AVFF01000020.1| 2523 1747 -3 - 777 Nitric oxide-dependent regulator DnrN or NorA Iron-sulfur cluster assembly;
Nitrosative stress
fig|6666666.67480.peg.1258 CDS gi|543387405|gb|AVFF01000020.1| 4758 3232 -3 - 1527 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.67480.peg.1259 CDS gi|543387405|gb|AVFF01000020.1| 5064 5630 3 + 567 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.67480.peg.1260 CDS gi|543387405|gb|AVFF01000020.1| 5064 8393 3 + 3330 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase
fig|6666666.67480.peg.1261 CDS gi|543387405|gb|AVFF01000020.1| 5700 8393 3 + 2694 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.67480.peg.1262 CDS gi|543387405|gb|AVFF01000020.1| 8400 9533 3 + 1134 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67480.peg.1263 CDS gi|543387405|gb|AVFF01000020.1| 9530 10648 2 + 1119 Formate dehydrogenase O putative subunit Formate hydrogenase
fig|6666666.67480.peg.1264 CDS gi|543387405|gb|AVFF01000020.1| 11721 10753 -3 - 969 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism
fig|6666666.67480.peg.1265 CDS gi|543387405|gb|AVFF01000020.1| 11780 11905 2 + 126 hypothetical protein - none -
fig|6666666.67480.peg.1266 CDS gi|543387405|gb|AVFF01000020.1| 12137 12012 -2 - 126 hypothetical protein - none -
fig|6666666.67480.peg.1267 CDS gi|543387405|gb|AVFF01000020.1| 12082 13536 1 + 1455 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.67480.peg.1268 CDS gi|543387405|gb|AVFF01000020.1| 13537 15375 1 + 1839 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.67480.peg.1269 CDS gi|543387405|gb|AVFF01000020.1| 16439 15549 -2 - 891 Exonuclease, RNase T and DNA polymerase III - none -
fig|6666666.67480.peg.1270 CDS gi|543387405|gb|AVFF01000020.1| 16776 17396 3 + 621 hypothetical protein - none -
fig|6666666.67480.peg.1271 CDS gi|543387405|gb|AVFF01000020.1| 17647 17841 1 + 195 hypothetical protein - none -
fig|6666666.67480.peg.1272 CDS gi|543387405|gb|AVFF01000020.1| 18141 17911 -3 - 231 Mobile element protein - none -
fig|6666666.67480.peg.1273 CDS gi|543387405|gb|AVFF01000020.1| 18461 18324 -2 - 138 hypothetical protein - none -
fig|6666666.67480.peg.1274 CDS gi|543387405|gb|AVFF01000020.1| 18757 20154 1 + 1398 Amino acid permease-associated region - none -
fig|6666666.67480.peg.1275 CDS gi|543387405|gb|AVFF01000020.1| 20828 20715 -2 - 114 hypothetical protein - none -
fig|6666666.67480.peg.1276 CDS gi|543387405|gb|AVFF01000020.1| 22211 21018 -2 - 1194 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67480.peg.1277 CDS gi|543387405|gb|AVFF01000020.1| 23420 22245 -2 - 1176 nodulin / glutamate-ammonia ligase-like protein - none -
fig|6666666.67480.peg.1278 CDS gi|543387405|gb|AVFF01000020.1| 24705 23410 -3 - 1296 glutamine synthetase family protein Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67480.peg.1279 CDS gi|543387405|gb|AVFF01000020.1| 25622 24714 -2 - 909 Amino acid permease - none -
fig|6666666.67480.peg.1280 CDS gi|543387405|gb|AVFF01000020.1| 26429 27733 2 + 1305 Xaa-Pro dipeptidase, putative - none -
fig|6666666.67480.peg.1281 CDS gi|543387405|gb|AVFF01000020.1| 27733 28938 1 + 1206 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67480.peg.1282 CDS gi|543387405|gb|AVFF01000020.1| 29010 30566 3 + 1557 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.67480.peg.1283 CDS gi|543387405|gb|AVFF01000020.1| 32480 30672 -2 - 1809 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67480.peg.1284 CDS gi|543387405|gb|AVFF01000020.1| 32823 33140 3 + 318 hypothetical protein - none -
fig|6666666.67480.peg.1285 CDS gi|543387405|gb|AVFF01000020.1| 33719 33537 -2 - 183 hypothetical protein - none -
fig|6666666.67480.peg.1286 CDS gi|543387405|gb|AVFF01000020.1| 35522 34206 -2 - 1317 hypothetical protein - none -
fig|6666666.67480.peg.1287 CDS gi|543387405|gb|AVFF01000020.1| 37080 35881 -3 - 1200 probable metallopeptidase - none -
fig|6666666.67480.peg.1288 CDS gi|543387405|gb|AVFF01000020.1| 38184 37225 -3 - 960 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.67480.peg.1289 CDS gi|543387405|gb|AVFF01000020.1| 39542 38226 -2 - 1317 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67480.peg.1290 CDS gi|543387405|gb|AVFF01000020.1| 39703 40998 1 + 1296 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Biotin synthesis cluster;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67480.peg.1291 CDS gi|543387405|gb|AVFF01000020.1| 41096 43246 2 + 2151 Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) - none -
fig|6666666.67480.peg.1292 CDS gi|543387405|gb|AVFF01000020.1| 44208 43243 -3 - 966 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67480.peg.1293 CDS gi|543387405|gb|AVFF01000020.1| 44311 44805 1 + 495 FIG00544249: hypothetical protein - none -
fig|6666666.67480.peg.1294 CDS gi|543387405|gb|AVFF01000020.1| 44818 45411 1 + 594 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67480.peg.1295 CDS gi|543387405|gb|AVFF01000020.1| 45469 45693 1 + 225 hypothetical protein - none -
fig|6666666.67480.peg.1296 CDS gi|543387448|gb|AVFF01000019.1| 365 84 -2 - 282 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67480.peg.1297 CDS gi|543387448|gb|AVFF01000019.1| 1001 432 -2 - 570 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67480.peg.1298 CDS gi|543387448|gb|AVFF01000019.1| 1330 1007 -1 - 324 integration host factor - none -
fig|6666666.67480.peg.1299 CDS gi|543387448|gb|AVFF01000019.1| 2466 1627 -3 - 840 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67480.peg.1300 CDS gi|543387448|gb|AVFF01000019.1| 5791 2456 -1 - 3336 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.1301 CDS gi|543387448|gb|AVFF01000019.1| 7002 5794 -3 - 1209 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.1302 CDS gi|543387448|gb|AVFF01000019.1| 8019 7069 -3 - 951 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.1303 CDS gi|543387448|gb|AVFF01000019.1| 8459 8076 -2 - 384 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.1304 CDS gi|543387448|gb|AVFF01000019.1| 9475 8540 -1 - 936 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.1305 CDS gi|543387448|gb|AVFF01000019.1| 10110 9475 -3 - 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.1306 CDS gi|543387448|gb|AVFF01000019.1| 10320 10925 3 + 606 Cell division inhibitor Persister Cells
fig|6666666.67480.peg.1307 CDS gi|543387448|gb|AVFF01000019.1| 10885 11619 1 + 735 Cell division inhibitor Persister Cells
fig|6666666.67480.peg.1308 CDS gi|543387448|gb|AVFF01000019.1| 11778 12296 3 + 519 FIG00544983: hypothetical protein - none -
fig|6666666.67480.peg.1309 CDS gi|543387448|gb|AVFF01000019.1| 12313 12765 1 + 453 hypothetical protein - none -
fig|6666666.67480.peg.1310 CDS gi|543387448|gb|AVFF01000019.1| 13655 12768 -2 - 888 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.67480.peg.1311 CDS gi|543387448|gb|AVFF01000019.1| 14072 13662 -2 - 411 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67480.peg.1312 CDS gi|543387448|gb|AVFF01000019.1| 14784 14221 -3 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67480.peg.1313 CDS gi|543387448|gb|AVFF01000019.1| 15990 14899 -3 - 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67480.peg.1314 CDS gi|543387448|gb|AVFF01000019.1| 16555 16100 -1 - 456 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67480.peg.1315 CDS gi|543387448|gb|AVFF01000019.1| 17716 16694 -1 - 1023 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67480.peg.1316 CDS gi|543387448|gb|AVFF01000019.1| 18273 17740 -3 - 534 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67480.peg.1317 CDS gi|543387448|gb|AVFF01000019.1| 19529 18270 -2 - 1260 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67480.peg.1318 CDS gi|543387448|gb|AVFF01000019.1| 19767 19651 -3 - 117 hypothetical protein - none -
fig|6666666.67480.peg.1319 CDS gi|543387448|gb|AVFF01000019.1| 20892 20047 -3 - 846 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67480.peg.1320 CDS gi|543387448|gb|AVFF01000019.1| 22081 20885 -1 - 1197 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67480.peg.1321 CDS gi|543387448|gb|AVFF01000019.1| 22627 22097 -1 - 531 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.67480.peg.1322 CDS gi|543387448|gb|AVFF01000019.1| 25434 22762 -3 - 2673 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67480.peg.1323 CDS gi|543387448|gb|AVFF01000019.1| 25728 25501 -3 - 228 ATPase, AAA family - none -
fig|6666666.67480.peg.1324 CDS gi|543387448|gb|AVFF01000019.1| 26944 25706 -1 - 1239 ATPase, AAA family - none -
fig|6666666.67480.peg.1325 CDS gi|543387448|gb|AVFF01000019.1| 28155 26944 -3 - 1212 FIG00544116: hypothetical protein - none -
fig|6666666.67480.peg.1326 CDS gi|543387448|gb|AVFF01000019.1| 30108 28282 -3 - 1827 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67480.peg.1327 CDS gi|543387448|gb|AVFF01000019.1| 30479 31888 2 + 1410 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67480.peg.1328 CDS gi|543387448|gb|AVFF01000019.1| 32004 31885 -3 - 120 hypothetical protein - none -
fig|6666666.67480.peg.1329 CDS gi|543387448|gb|AVFF01000019.1| 33158 31983 -2 - 1176 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67480.peg.1330 CDS gi|543387448|gb|AVFF01000019.1| 33823 33170 -1 - 654 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67480.peg.1331 CDS gi|543387448|gb|AVFF01000019.1| 34393 33875 -1 - 519 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.67480.peg.1332 CDS gi|543387448|gb|AVFF01000019.1| 34598 35470 2 + 873 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.67480.peg.1333 CDS gi|543387448|gb|AVFF01000019.1| 35572 35913 1 + 342 hypothetical protein - none -
fig|6666666.67480.peg.1334 CDS gi|543387448|gb|AVFF01000019.1| 38408 36117 -2 - 2292 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67480.peg.1335 CDS gi|543387448|gb|AVFF01000019.1| 38311 38430 1 + 120 hypothetical protein - none -
fig|6666666.67480.peg.1336 CDS gi|543387448|gb|AVFF01000019.1| 38993 38427 -2 - 567 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67480.peg.1337 CDS gi|543387448|gb|AVFF01000019.1| 40566 39136 -3 - 1431 hypothetical protein - none -
fig|6666666.67480.peg.1338 CDS gi|543387448|gb|AVFF01000019.1| 42110 40959 -2 - 1152 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67480.peg.1339 CDS gi|543387448|gb|AVFF01000019.1| 42468 42103 -3 - 366 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67480.peg.1340 CDS gi|543387448|gb|AVFF01000019.1| 43921 42455 -1 - 1467 hypothetical protein - none -
fig|6666666.67480.peg.1341 CDS gi|543387448|gb|AVFF01000019.1| 44239 43970 -1 - 270 hypothetical protein - none -
fig|6666666.67480.peg.1342 CDS gi|543387448|gb|AVFF01000019.1| 45556 44435 -1 - 1122 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67480.peg.1343 CDS gi|543387448|gb|AVFF01000019.1| 46212 45568 -3 - 645 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67480.peg.1344 CDS gi|543387448|gb|AVFF01000019.1| 46759 46220 -1 - 540 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67480.peg.1345 CDS gi|543387448|gb|AVFF01000019.1| 47520 46765 -3 - 756 FIG000859: hypothetical protein - none -
fig|6666666.67480.peg.1346 CDS gi|543387448|gb|AVFF01000019.1| 47986 48462 1 + 477 FIG00546244: hypothetical protein - none -
fig|6666666.67480.peg.1347 CDS gi|543387448|gb|AVFF01000019.1| 49042 48518 -1 - 525 FIG053954: Probable conserved membrane protein - none -
fig|6666666.67480.peg.1348 CDS gi|543387448|gb|AVFF01000019.1| 50136 49039 -3 - 1098 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.67480.peg.1349 CDS gi|543387448|gb|AVFF01000019.1| 51125 50148 -2 - 978 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.67480.peg.1350 CDS gi|543387448|gb|AVFF01000019.1| 51712 51122 -1 - 591 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.1351 CDS gi|543387448|gb|AVFF01000019.1| 52319 51738 -2 - 582 FIG049476: HIT family protein - none -
fig|6666666.67480.peg.1352 CDS gi|543387448|gb|AVFF01000019.1| 52728 52303 -3 - 426 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.67480.peg.1353 CDS gi|543387448|gb|AVFF01000019.1| 54367 52697 -1 - 1671 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.67480.peg.1354 CDS gi|543387448|gb|AVFF01000019.1| 55794 54517 -3 - 1278 Dyp-type peroxidase family protein - none -
fig|6666666.67480.peg.1355 CDS gi|543387448|gb|AVFF01000019.1| 56521 55895 -1 - 627 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67480.peg.1356 CDS gi|543387448|gb|AVFF01000019.1| 56948 56643 -2 - 306 Copper resistance protein CopC Copper Transport System;
Copper homeostasis
fig|6666666.67480.peg.1357 CDS gi|543387448|gb|AVFF01000019.1| 57265 57017 -1 - 249 FIG00543909: hypothetical protein - none -
fig|6666666.67480.peg.1358 CDS gi|543387448|gb|AVFF01000019.1| 58310 59026 2 + 717 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.67480.peg.1359 CDS gi|543387448|gb|AVFF01000019.1| 59026 60231 1 + 1206 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67480.peg.1360 CDS gi|543387448|gb|AVFF01000019.1| 60327 60728 3 + 402 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67480.peg.1361 CDS gi|543387448|gb|AVFF01000019.1| 61550 60816 -2 - 735 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1362 CDS gi|543387448|gb|AVFF01000019.1| 61755 62378 3 + 624 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67480.peg.1363 CDS gi|543387448|gb|AVFF01000019.1| 62455 63678 1 + 1224 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.67480.peg.1364 CDS gi|543387448|gb|AVFF01000019.1| 65302 63650 -1 - 1653 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67480.peg.1365 CDS gi|543387448|gb|AVFF01000019.1| 66905 65679 -2 - 1227 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67480.peg.1366 CDS gi|543387448|gb|AVFF01000019.1| 67753 66908 -1 - 846 FIG00545882: hypothetical protein - none -
fig|6666666.67480.peg.1367 CDS gi|543387448|gb|AVFF01000019.1| 67901 67788 -2 - 114 hypothetical protein - none -
fig|6666666.67480.peg.1368 CDS gi|543387448|gb|AVFF01000019.1| 68236 67973 -1 - 264 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67480.peg.1369 CDS gi|543387448|gb|AVFF01000019.1| 68560 69072 1 + 513 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67480.peg.1370 CDS gi|543387448|gb|AVFF01000019.1| 69192 69079 -3 - 114 hypothetical protein - none -
fig|6666666.67480.peg.1371 CDS gi|543387448|gb|AVFF01000019.1| 69451 69161 -1 - 291 FIG00545109: hypothetical protein - none -
fig|6666666.67480.peg.1372 CDS gi|543387448|gb|AVFF01000019.1| 70507 69572 -1 - 936 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67480.peg.1373 CDS gi|543387448|gb|AVFF01000019.1| 70592 71356 2 + 765 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67480.peg.1374 CDS gi|543387448|gb|AVFF01000019.1| 71714 72919 2 + 1206 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.67480.peg.1375 CDS gi|543387448|gb|AVFF01000019.1| 73228 73046 -1 - 183 hypothetical protein - none -
fig|6666666.67480.peg.1376 CDS gi|543387448|gb|AVFF01000019.1| 73608 73225 -3 - 384 hypothetical protein - none -
fig|6666666.67480.peg.1377 CDS gi|543387448|gb|AVFF01000019.1| 74421 73750 -3 - 672 DNA or RNA helicases of superfamily II - none -
fig|6666666.67480.peg.1378 CDS gi|543387448|gb|AVFF01000019.1| 75542 74391 -2 - 1152 DNA or RNA helicases of superfamily II - none -
fig|6666666.67480.peg.1379 CDS gi|543387448|gb|AVFF01000019.1| 75844 75602 -1 - 243 FIG00544358: hypothetical protein - none -
fig|6666666.67480.peg.1380 CDS gi|543387448|gb|AVFF01000019.1| 76111 76374 1 + 264 hypothetical protein - none -
fig|6666666.67480.peg.1381 CDS gi|543387448|gb|AVFF01000019.1| 76418 77968 2 + 1551 Putative transferase - none -
fig|6666666.67480.peg.1382 CDS gi|543387448|gb|AVFF01000019.1| 78073 78513 1 + 441 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67480.peg.1383 CDS gi|543387448|gb|AVFF01000019.1| 78639 79628 3 + 990 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67480.peg.1384 CDS gi|543387448|gb|AVFF01000019.1| 79585 79701 1 + 117 hypothetical protein - none -
fig|6666666.67480.peg.1385 CDS gi|543387448|gb|AVFF01000019.1| 79747 80427 1 + 681 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67480.peg.1386 CDS gi|543387448|gb|AVFF01000019.1| 80476 81468 1 + 993 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.67480.peg.1387 CDS gi|543387448|gb|AVFF01000019.1| 82432 81434 -1 - 999 hypothetical protein - none -
fig|6666666.67480.peg.1388 CDS gi|543387448|gb|AVFF01000019.1| 82811 83764 2 + 954 FIG00544614: hypothetical protein - none -
fig|6666666.67480.peg.1389 CDS gi|543387448|gb|AVFF01000019.1| 83787 86342 3 + 2556 putative helicase - none -
fig|6666666.67480.peg.1390 CDS gi|543387448|gb|AVFF01000019.1| 86523 87485 3 + 963 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67480.peg.1391 CDS gi|543387448|gb|AVFF01000019.1| 88472 87498 -2 - 975 hypothetical membrane protein - none -
fig|6666666.67480.peg.1392 CDS gi|543387448|gb|AVFF01000019.1| 88591 92730 1 + 4140 ATP-dependent helicase HrpA - none -
fig|6666666.67480.peg.1393 CDS gi|543387448|gb|AVFF01000019.1| 93086 92766 -2 - 321 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67480.peg.1394 CDS gi|543387448|gb|AVFF01000019.1| 93482 93312 -2 - 171 hypothetical protein - none -
fig|6666666.67480.peg.1395 CDS gi|543387448|gb|AVFF01000019.1| 93918 94193 3 + 276 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67480.peg.1396 CDS gi|543387448|gb|AVFF01000019.1| 94339 94632 1 + 294 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67480.peg.1397 CDS gi|543387448|gb|AVFF01000019.1| 94680 95459 3 + 780 Transcriptional repressor of the fructose operon, DeoR family - none -
fig|6666666.67480.peg.1398 CDS gi|543387448|gb|AVFF01000019.1| 96754 95492 -1 - 1263 xanthine/uracil permeases - none -
fig|6666666.67480.peg.1399 CDS gi|543387448|gb|AVFF01000019.1| 98442 96790 -3 - 1653 GTP-binding protein HflX Hfl operon
fig|6666666.67480.peg.1400 CDS gi|543387448|gb|AVFF01000019.1| 98522 99298 2 + 777 FIG00546075: hypothetical protein - none -
fig|6666666.67480.peg.1401 CDS gi|543387448|gb|AVFF01000019.1| 99420 99617 3 + 198 hypothetical protein - none -
fig|6666666.67480.peg.1402 CDS gi|543387448|gb|AVFF01000019.1| 99644 99958 2 + 315 hypothetical protein - none -
fig|6666666.67480.peg.1403 CDS gi|543387448|gb|AVFF01000019.1| 100888 100007 -1 - 882 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.1404 CDS gi|543387448|gb|AVFF01000019.1| 101820 100900 -3 - 921 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.67480.peg.1405 CDS gi|543387448|gb|AVFF01000019.1| 102707 101910 -2 - 798 hypothetical protein - none -
fig|6666666.67480.peg.1406 CDS gi|543387448|gb|AVFF01000019.1| 102988 103773 1 + 786 ATPase involved in DNA repair - none -
fig|6666666.67480.peg.1407 CDS gi|543387448|gb|AVFF01000019.1| 103730 104266 2 + 537 ATPase involved in DNA repair - none -
fig|6666666.67480.peg.1408 CDS gi|543387448|gb|AVFF01000019.1| 104285 105532 2 + 1248 No significant database matches - none -
fig|6666666.67480.peg.1409 CDS gi|543387448|gb|AVFF01000019.1| 106191 105529 -3 - 663 Putative membrane protein - none -
fig|6666666.67480.peg.1410 CDS gi|543387448|gb|AVFF01000019.1| 107690 106215 -2 - 1476 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67480.peg.1411 CDS gi|543387448|gb|AVFF01000019.1| 108888 108043 -3 - 846 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67480.peg.1412 CDS gi|543387448|gb|AVFF01000019.1| 110037 108982 -3 - 1056 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67480.peg.1413 CDS gi|543387448|gb|AVFF01000019.1| 110956 110309 -1 - 648 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67480.peg.1414 CDS gi|543387448|gb|AVFF01000019.1| 112013 110940 -2 - 1074 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67480.peg.1415 CDS gi|543387448|gb|AVFF01000019.1| 112516 112301 -1 - 216 hypothetical protein - none -
fig|6666666.67480.peg.1416 CDS gi|543387448|gb|AVFF01000019.1| 113401 112562 -1 - 840 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67480.peg.1417 CDS gi|543387448|gb|AVFF01000019.1| 113960 113547 -2 - 414 putative transcription regulator - none -
fig|6666666.67480.peg.1418 CDS gi|543387448|gb|AVFF01000019.1| 114594 114094 -3 - 501 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin synthesis cluster
fig|6666666.67480.peg.1419 CDS gi|543387448|gb|AVFF01000019.1| 115030 114596 -1 - 435 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.1420 CDS gi|543387448|gb|AVFF01000019.1| 116206 115193 -1 - 1014 Integral membrane protein TerC - none -
fig|6666666.67480.peg.1421 CDS gi|543387448|gb|AVFF01000019.1| 118749 116431 -3 - 2319 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67480.peg.1422 CDS gi|543387448|gb|AVFF01000019.1| 119953 118739 -1 - 1215 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67480.peg.1423 CDS gi|543387448|gb|AVFF01000019.1| 120515 120039 -2 - 477 hypothetical protein - none -
fig|6666666.67480.peg.1424 CDS gi|543387448|gb|AVFF01000019.1| 122978 120714 -2 - 2265 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.67480.peg.1425 CDS gi|543387448|gb|AVFF01000019.1| 123827 122979 -2 - 849 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67480.peg.1426 CDS gi|543387448|gb|AVFF01000019.1| 124760 124005 -2 - 756 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67480.peg.1427 CDS gi|543387448|gb|AVFF01000019.1| 125513 124764 -2 - 750 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67480.peg.1428 CDS gi|543387448|gb|AVFF01000019.1| 125659 126354 1 + 696 No significant database matches - none -
fig|6666666.67480.peg.1429 CDS gi|543387448|gb|AVFF01000019.1| 128800 126494 -1 - 2307 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.67480.peg.1430 CDS gi|543387448|gb|AVFF01000019.1| 129299 129030 -2 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.67480.peg.1431 CDS gi|543387448|gb|AVFF01000019.1| 130510 129455 -1 - 1056 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67480.peg.1432 CDS gi|543387448|gb|AVFF01000019.1| 130559 131542 2 + 984 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67480.peg.1433 CDS gi|543387448|gb|AVFF01000019.1| 132262 131585 -1 - 678 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.67480.peg.1434 CDS gi|543387448|gb|AVFF01000019.1| 133176 132259 -3 - 918 putative SimX4 homolog - none -
fig|6666666.67480.peg.1435 CDS gi|543387448|gb|AVFF01000019.1| 134533 133193 -1 - 1341 putative DNA-damage-inducible protein F - none -
fig|6666666.67480.peg.1436 CDS gi|543387448|gb|AVFF01000019.1| 135348 134524 -3 - 825 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67480.peg.1437 CDS gi|543387448|gb|AVFF01000019.1| 135946 135515 -1 - 432 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67480.peg.1438 CDS gi|543387448|gb|AVFF01000019.1| 138994 136118 -1 - 2877 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67480.peg.1439 CDS gi|543387448|gb|AVFF01000019.1| 139324 139443 1 + 120 hypothetical protein - none -
fig|6666666.67480.peg.1440 CDS gi|543387448|gb|AVFF01000019.1| 140773 139526 -1 - 1248 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67480.peg.1441 CDS gi|543387448|gb|AVFF01000019.1| 141474 140785 -3 - 690 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.67480.peg.1442 CDS gi|543387448|gb|AVFF01000019.1| 141512 142381 2 + 870 Putative secreted protein - none -
fig|6666666.67480.peg.1443 CDS gi|543387448|gb|AVFF01000019.1| 142714 143280 1 + 567 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.67480.peg.1444 CDS gi|543387448|gb|AVFF01000019.1| 145180 143351 -1 - 1830 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.67480.peg.1445 CDS gi|543387448|gb|AVFF01000019.1| 145224 145997 3 + 774 UPF0246 protein YaaA - none -
fig|6666666.67480.peg.1446 CDS gi|543387448|gb|AVFF01000019.1| 146193 147125 3 + 933 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67480.peg.1447 CDS gi|543387448|gb|AVFF01000019.1| 147129 148595 3 + 1467 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67480.peg.1448 CDS gi|543387448|gb|AVFF01000019.1| 149495 148728 -2 - 768 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67480.peg.1449 CDS gi|543387448|gb|AVFF01000019.1| 150225 149458 -3 - 768 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67480.peg.1450 CDS gi|543387448|gb|AVFF01000019.1| 150446 150321 -2 - 126 hypothetical protein - none -
fig|6666666.67480.peg.1451 CDS gi|543387448|gb|AVFF01000019.1| 150492 151556 3 + 1065 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67480.peg.1452 CDS gi|543387448|gb|AVFF01000019.1| 151574 153001 2 + 1428 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67480.peg.1453 CDS gi|543387448|gb|AVFF01000019.1| 153966 153100 -3 - 867 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67480.peg.1454 CDS gi|543387448|gb|AVFF01000019.1| 156065 154200 -2 - 1866 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.1455 CDS gi|543387448|gb|AVFF01000019.1| 157261 156098 -1 - 1164 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67480.peg.1456 CDS gi|543387448|gb|AVFF01000019.1| 157544 157329 -2 - 216 Membrane-associated zinc metalloprotease - none -
fig|6666666.67480.peg.1457 CDS gi|543387448|gb|AVFF01000019.1| 158550 157546 -3 - 1005 Membrane-associated zinc metalloprotease - none -
fig|6666666.67480.peg.1458 CDS gi|543387448|gb|AVFF01000019.1| 159854 158619 -2 - 1236 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67480.peg.1459 CDS gi|543387448|gb|AVFF01000019.1| 160002 160439 3 + 438 hypothetical membrane protein - none -
fig|6666666.67480.peg.1460 CDS gi|543387448|gb|AVFF01000019.1| 161727 160600 -3 - 1128 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67480.peg.1461 CDS gi|543387448|gb|AVFF01000019.1| 162661 161768 -1 - 894 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.1462 CDS gi|543387448|gb|AVFF01000019.1| 163395 162838 -3 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67480.peg.1463 CDS gi|543387448|gb|AVFF01000019.1| 164207 163467 -2 - 741 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67480.peg.1464 CDS gi|543387448|gb|AVFF01000019.1| 165232 164495 -1 - 738 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67480.peg.1465 CDS gi|543387448|gb|AVFF01000019.1| 166048 165308 -1 - 741 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.67480.peg.1466 CDS gi|543387448|gb|AVFF01000019.1| 166560 167159 3 + 600 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.67480.peg.1467 CDS gi|543387448|gb|AVFF01000019.1| 168049 167189 -1 - 861 Tyrosine recombinase XerC - none -
fig|6666666.67480.peg.1468 CDS gi|543387448|gb|AVFF01000019.1| 169432 168221 -1 - 1212 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67480.peg.1469 CDS gi|543387448|gb|AVFF01000019.1| 170979 169429 -3 - 1551 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67480.peg.1470 CDS gi|543387448|gb|AVFF01000019.1| 171130 170966 -1 - 165 hypothetical protein - none -
fig|6666666.67480.peg.1471 CDS gi|543387448|gb|AVFF01000019.1| 171089 171214 2 + 126 hypothetical protein - none -
fig|6666666.67480.peg.1472 CDS gi|543387448|gb|AVFF01000019.1| 171895 171587 -1 - 309 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67480.peg.1473 CDS gi|543387448|gb|AVFF01000019.1| 172636 172019 -1 - 618 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.67480.peg.1474 CDS gi|543387448|gb|AVFF01000019.1| 173378 172716 -2 - 663 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67480.peg.1475 CDS gi|543387448|gb|AVFF01000019.1| 174366 173434 -3 - 933 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67480.peg.1476 CDS gi|543387448|gb|AVFF01000019.1| 174846 174502 -3 - 345 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67480.peg.1477 CDS gi|543387448|gb|AVFF01000019.1| 175024 176871 1 + 1848 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.67480.peg.1478 CDS gi|543387448|gb|AVFF01000019.1| 176955 177188 3 + 234 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.67480.peg.1479 CDS gi|543387448|gb|AVFF01000019.1| 177196 177978 1 + 783 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67480.peg.1480 CDS gi|543387448|gb|AVFF01000019.1| 177979 179220 1 + 1242 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67480.peg.1481 CDS gi|543387448|gb|AVFF01000019.1| 179462 179295 -2 - 168 hypothetical protein - none -
fig|6666666.67480.peg.1482 CDS gi|543387448|gb|AVFF01000019.1| 181993 179648 -1 - 2346 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67480.peg.1483 CDS gi|543387448|gb|AVFF01000019.1| 182967 182083 -3 - 885 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.67480.peg.1484 CDS gi|543387448|gb|AVFF01000019.1| 183539 182964 -2 - 576 16S rRNA processing protein RimM - none -
fig|6666666.67480.peg.1485 CDS gi|543387448|gb|AVFF01000019.1| 184056 183574 -3 - 483 SSU ribosomal protein S16p - none -
fig|6666666.67480.peg.1486 CDS gi|543387448|gb|AVFF01000019.1| 184144 184317 1 + 174 hypothetical protein - none -
fig|6666666.67480.peg.1487 CDS gi|543387448|gb|AVFF01000019.1| 184508 185152 2 + 645 O-antigen acetylase - none -
fig|6666666.67480.peg.1488 CDS gi|543387448|gb|AVFF01000019.1| 185191 186558 1 + 1368 O-antigen acetylase - none -
fig|6666666.67480.peg.1489 CDS gi|543387448|gb|AVFF01000019.1| 188134 186560 -1 - 1575 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.67480.peg.1490 CDS gi|543387448|gb|AVFF01000019.1| 188728 188441 -1 - 288 hypothetical protein - none -
fig|6666666.67480.peg.1491 CDS gi|543387448|gb|AVFF01000019.1| 189027 188833 -3 - 195 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67480.peg.1492 CDS gi|543387448|gb|AVFF01000019.1| 189464 189093 -2 - 372 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67480.peg.1493 CDS gi|543387448|gb|AVFF01000019.1| 191056 189464 -1 - 1593 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67480.peg.1494 CDS gi|543387448|gb|AVFF01000019.1| 191403 191056 -3 - 348 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67480.peg.1495 CDS gi|543387448|gb|AVFF01000019.1| 194223 191407 -3 - 2817 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67480.peg.1496 CDS gi|543387448|gb|AVFF01000019.1| 195855 194248 -3 - 1608 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.67480.peg.1497 CDS gi|543387448|gb|AVFF01000019.1| 196809 195943 -3 - 867 Glycine betaine ABC transport system, permease/glycine betaine-binding protein OpuABC Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67480.peg.1498 CDS gi|543387448|gb|AVFF01000019.1| 200274 196945 -3 - 3330 Chromosome partition protein smc - none -
fig|6666666.67480.peg.1499 CDS gi|543387658|gb|AVFF01000018.1| 196 822 1 + 627 FIG00543872: hypothetical protein - none -
fig|6666666.67480.peg.1500 CDS gi|543387658|gb|AVFF01000018.1| 852 1319 3 + 468 FIG00818182: hypothetical protein - none -
fig|6666666.67480.peg.1501 CDS gi|543387658|gb|AVFF01000018.1| 1320 2927 3 + 1608 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67480.peg.1502 CDS gi|543387658|gb|AVFF01000018.1| 2928 4427 3 + 1500 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67480.peg.1503 CDS gi|543387658|gb|AVFF01000018.1| 4424 5851 2 + 1428 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.1504 CDS gi|543387658|gb|AVFF01000018.1| 5855 7675 2 + 1821 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67480.peg.1505 CDS gi|543387658|gb|AVFF01000018.1| 7678 9741 1 + 2064 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.67480.peg.1506 CDS gi|543387658|gb|AVFF01000018.1| 9958 10128 1 + 171 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67480.peg.1507 CDS gi|543387658|gb|AVFF01000018.1| 10306 10689 1 + 384 Putative membrane protein - none -
fig|6666666.67480.peg.1508 CDS gi|543387658|gb|AVFF01000018.1| 10759 11283 1 + 525 Putative RNA polymerase ECF-subfamily sigma factor - none -
fig|6666666.67480.peg.1509 CDS gi|543387658|gb|AVFF01000018.1| 11283 12464 3 + 1182 hypothetical protein - none -
fig|6666666.67480.peg.1510 CDS gi|543387658|gb|AVFF01000018.1| 13687 13157 -1 - 531 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.67480.peg.1511 CDS gi|543387658|gb|AVFF01000018.1| 13860 14921 3 + 1062 hypothetical protein - none -
fig|6666666.67480.peg.1512 CDS gi|543387658|gb|AVFF01000018.1| 17326 15029 -1 - 2298 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67480.peg.1513 CDS gi|543387658|gb|AVFF01000018.1| 18422 17454 -2 - 969 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.67480.peg.1514 CDS gi|543387658|gb|AVFF01000018.1| 18694 18551 -1 - 144 hypothetical protein - none -
fig|6666666.67480.peg.1515 CDS gi|543387658|gb|AVFF01000018.1| 18756 19721 3 + 966 Putative membrane protein - none -
fig|6666666.67480.peg.1516 CDS gi|543387658|gb|AVFF01000018.1| 19976 20212 2 + 237 hypothetical protein - none -
fig|6666666.67480.peg.1517 CDS gi|543387658|gb|AVFF01000018.1| 20222 21364 2 + 1143 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67480.peg.1518 CDS gi|543387658|gb|AVFF01000018.1| 21909 22190 3 + 282 Mobile element protein - none -
fig|6666666.67480.peg.1519 CDS gi|543387658|gb|AVFF01000018.1| 22305 22144 -3 - 162 hypothetical protein - none -
fig|6666666.67480.peg.1520 CDS gi|543387658|gb|AVFF01000018.1| 22596 22450 -3 - 147 hypothetical protein - none -
fig|6666666.67480.peg.1521 CDS gi|543387658|gb|AVFF01000018.1| 23526 23269 -3 - 258 FIG00544707: hypothetical protein - none -
fig|6666666.67480.peg.1522 CDS gi|543387658|gb|AVFF01000018.1| 23956 23537 -1 - 420 FIG00544707: hypothetical protein - none -
fig|6666666.67480.peg.1523 CDS gi|543387658|gb|AVFF01000018.1| 25903 24005 -1 - 1899 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67480.peg.1524 CDS gi|543387658|gb|AVFF01000018.1| 25955 26179 2 + 225 hypothetical protein - none -
fig|6666666.67480.peg.1525 CDS gi|543387658|gb|AVFF01000018.1| 26338 26186 -1 - 153 Cation transport ATPase - none -
fig|6666666.67480.peg.1526 CDS gi|543387658|gb|AVFF01000018.1| 27753 26626 -3 - 1128 two-component system, sensory transduction histidine kinase - none -
fig|6666666.67480.peg.1527 CDS gi|543387658|gb|AVFF01000018.1| 28472 27750 -2 - 723 two-component system, response regulator - none -
fig|6666666.67480.peg.1528 CDS gi|543387658|gb|AVFF01000018.1| 28876 29451 1 + 576 putative exported protein - none -
fig|6666666.67480.peg.1529 CDS gi|543387658|gb|AVFF01000018.1| 29523 31004 3 + 1482 Multicopper oxidase Copper homeostasis
fig|6666666.67480.peg.1530 CDS gi|543387658|gb|AVFF01000018.1| 31129 31281 1 + 153 Mobile element protein - none -
fig|6666666.67480.peg.1531 CDS gi|543387658|gb|AVFF01000018.1| 31333 31467 1 + 135 Mobile element protein - none -
fig|6666666.67480.peg.1532 CDS gi|543387658|gb|AVFF01000018.1| 31819 32040 1 + 222 Mobile element protein - none -
fig|6666666.67480.peg.1533 CDS gi|543387658|gb|AVFF01000018.1| 32939 32379 -2 - 561 Transposon Tn21 resolvase - none -
fig|6666666.67480.peg.1534 CDS gi|543387658|gb|AVFF01000018.1| 33238 32954 -1 - 285 hypothetical protein - none -
fig|6666666.67480.peg.1535 CDS gi|543387658|gb|AVFF01000018.1| 33520 33918 1 + 399 hypothetical protein - none -
fig|6666666.67480.peg.1536 CDS gi|543387658|gb|AVFF01000018.1| 34960 34052 -1 - 909 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67480.peg.1537 CDS gi|543387658|gb|AVFF01000018.1| 35511 35083 -3 - 429 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67480.peg.1538 CDS gi|543387658|gb|AVFF01000018.1| 36038 35538 -2 - 501 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67480.peg.1539 CDS gi|543387658|gb|AVFF01000018.1| 38054 36186 -2 - 1869 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67480.peg.1540 CDS gi|543387658|gb|AVFF01000018.1| 38521 38156 -1 - 366 Transcriptional regulator, ArsR family - none -
fig|6666666.67480.peg.1541 CDS gi|543387658|gb|AVFF01000018.1| 39588 38698 -3 - 891 FIG00546434: hypothetical protein - none -
fig|6666666.67480.peg.1542 CDS gi|543387658|gb|AVFF01000018.1| 39685 41130 1 + 1446 Copper resistance protein D Copper homeostasis
fig|6666666.67480.peg.1543 CDS gi|543387658|gb|AVFF01000018.1| 41094 41582 3 + 489 Copper resistance protein D Copper homeostasis
fig|6666666.67480.peg.1544 CDS gi|543387658|gb|AVFF01000018.1| 41949 42740 3 + 792 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67480.peg.1545 CDS gi|543387658|gb|AVFF01000018.1| 43076 43213 2 + 138 hypothetical protein - none -
fig|6666666.67480.peg.1546 CDS gi|543387658|gb|AVFF01000018.1| 43365 44024 3 + 660 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.67480.peg.1547 CDS gi|543387658|gb|AVFF01000018.1| 44037 44684 3 + 648 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67480.peg.1548 CDS gi|543387658|gb|AVFF01000018.1| 46458 47054 3 + 597 cadmium resistance transporter, putative - none -
fig|6666666.67480.peg.1549 CDS gi|543387658|gb|AVFF01000018.1| 47645 47502 -2 - 144 hypothetical protein - none -
fig|6666666.67480.peg.1550 CDS gi|543387658|gb|AVFF01000018.1| 47878 47642 -1 - 237 putative membrane protein - none -
fig|6666666.67480.peg.1551 CDS gi|543387792|gb|AVFF01000017.1| 2411 1347 -2 - 1065 hypothetical protein - none -
fig|6666666.67480.peg.1552 CDS gi|543387792|gb|AVFF01000017.1| 2567 2454 -2 - 114 hypothetical protein - none -
fig|6666666.67480.peg.1553 CDS gi|543387792|gb|AVFF01000017.1| 3097 4701 1 + 1605 Putative amino acid export carrier protein - none -
fig|6666666.67480.peg.1554 CDS gi|543387792|gb|AVFF01000017.1| 4797 5219 3 + 423 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67480.peg.1555 CDS gi|543387792|gb|AVFF01000017.1| 5274 6827 3 + 1554 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.67480.peg.1556 CDS gi|543387792|gb|AVFF01000017.1| 6977 7450 2 + 474 hypothetical protein - none -
fig|6666666.67480.peg.1557 CDS gi|543387792|gb|AVFF01000017.1| 7475 8266 2 + 792 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67480.peg.1558 CDS gi|543387792|gb|AVFF01000017.1| 8313 8696 3 + 384 Putative membrane protein - none -
fig|6666666.67480.peg.1559 CDS gi|543387792|gb|AVFF01000017.1| 9708 8686 -3 - 1023 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.67480.peg.1560 CDS gi|543387792|gb|AVFF01000017.1| 10648 9872 -1 - 777 hypothetical protein - none -
fig|6666666.67480.peg.1561 CDS gi|543387792|gb|AVFF01000017.1| 10829 10641 -2 - 189 hypothetical protein - none -
fig|6666666.67480.peg.1562 CDS gi|543387792|gb|AVFF01000017.1| 12053 10914 -2 - 1140 Transcriptional regulator, LacI family - none -
fig|6666666.67480.peg.1563 CDS gi|543387792|gb|AVFF01000017.1| 12212 13174 2 + 963 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67480.peg.1564 CDS gi|543387792|gb|AVFF01000017.1| 13181 13870 2 + 690 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67480.peg.1565 CDS gi|543387792|gb|AVFF01000017.1| 13870 14838 1 + 969 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67480.peg.1566 CDS gi|543387792|gb|AVFF01000017.1| 15764 15048 -2 - 717 hypothetical protein - none -
fig|6666666.67480.peg.1567 CDS gi|543387792|gb|AVFF01000017.1| 17074 15842 -1 - 1233 Protein RtcB - none -
fig|6666666.67480.peg.1568 CDS gi|543387792|gb|AVFF01000017.1| 18181 17240 -1 - 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67480.peg.1569 CDS gi|543387792|gb|AVFF01000017.1| 19119 18370 -3 - 750 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67480.peg.1570 CDS gi|543387792|gb|AVFF01000017.1| 19901 19116 -2 - 786 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67480.peg.1571 CDS gi|543387792|gb|AVFF01000017.1| 21140 19932 -2 - 1209 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67480.peg.1572 CDS gi|543387792|gb|AVFF01000017.1| 21352 21137 -1 - 216 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67480.peg.1573 CDS gi|543387792|gb|AVFF01000017.1| 21987 21403 -3 - 585 CarD-like transcriptional regulator - none -
fig|6666666.67480.peg.1574 CDS gi|543387792|gb|AVFF01000017.1| 22144 22028 -1 - 117 hypothetical protein - none -
fig|6666666.67480.peg.1575 CDS gi|543387792|gb|AVFF01000017.1| 22216 22872 1 + 657 hypothetical protein - none -
fig|6666666.67480.peg.1576 CDS gi|543387792|gb|AVFF01000017.1| 23056 24615 1 + 1560 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67480.peg.1577 CDS gi|543387792|gb|AVFF01000017.1| 25043 24765 -2 - 279 hypothetical protein - none -
fig|6666666.67480.peg.1578 CDS gi|543387792|gb|AVFF01000017.1| 26131 25385 -1 - 747 hypothetical protein - none -
fig|6666666.67480.peg.1579 CDS gi|543387792|gb|AVFF01000017.1| 26942 26325 -2 - 618 Carbonic anhydrase (EC 4.2.1.1) Cyanate hydrolysis
fig|6666666.67480.peg.1580 CDS gi|543387792|gb|AVFF01000017.1| 26978 27913 2 + 936 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67480.peg.1581 CDS gi|543387792|gb|AVFF01000017.1| 28512 29099 3 + 588 ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67480.peg.1582 CDS gi|543387792|gb|AVFF01000017.1| 29102 30085 2 + 984 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.67480.peg.1583 CDS gi|543387792|gb|AVFF01000017.1| 30085 30870 1 + 786 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.1584 CDS gi|543387792|gb|AVFF01000017.1| 31054 31320 1 + 267 hypothetical protein - none -
fig|6666666.67480.peg.1585 CDS gi|543387792|gb|AVFF01000017.1| 31406 32374 2 + 969 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67480.peg.1586 CDS gi|543387792|gb|AVFF01000017.1| 33680 32541 -2 - 1140 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67480.peg.1587 CDS gi|543387792|gb|AVFF01000017.1| 35413 33731 -1 - 1683 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67480.peg.1588 CDS gi|543387792|gb|AVFF01000017.1| 36601 35654 -1 - 948 Membrane protein - none -
fig|6666666.67480.peg.1589 CDS gi|543387792|gb|AVFF01000017.1| 37824 36577 -3 - 1248 FIG00546485: hypothetical protein - none -
fig|6666666.67480.peg.1590 CDS gi|543387792|gb|AVFF01000017.1| 39559 38078 -1 - 1482 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67480.peg.1591 CDS gi|543387792|gb|AVFF01000017.1| 41040 39598 -3 - 1443 permease of the major facilitator superfamily - none -
fig|6666666.67480.peg.1592 CDS gi|543387792|gb|AVFF01000017.1| 42752 41085 -2 - 1668 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67480.peg.1593 CDS gi|543387792|gb|AVFF01000017.1| 42837 44558 3 + 1722 Carbon starvation protein A Carbon Starvation;
Stress related cluster
fig|6666666.67480.peg.1594 CDS gi|543387792|gb|AVFF01000017.1| 44581 44844 1 + 264 FIG00545541: hypothetical protein - none -
fig|6666666.67480.peg.1595 CDS gi|543387792|gb|AVFF01000017.1| 44835 45908 3 + 1074 Arsenical pump-driving ATPase (EC 3.6.3.16) Arsenic resistance;
Stress related cluster
fig|6666666.67480.peg.1596 CDS gi|543387792|gb|AVFF01000017.1| 46242 45913 -3 - 330 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67480.peg.1597 CDS gi|543387792|gb|AVFF01000017.1| 46879 46211 -1 - 669 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67480.peg.1598 CDS gi|543387792|gb|AVFF01000017.1| 48233 46980 -2 - 1254 hypothetical protein - none -
fig|6666666.67480.peg.1599 CDS gi|543387792|gb|AVFF01000017.1| 48709 48248 -1 - 462 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67480.peg.1600 CDS gi|543387792|gb|AVFF01000017.1| 49241 48717 -2 - 525 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67480.peg.1601 CDS gi|543387792|gb|AVFF01000017.1| 49588 49238 -1 - 351 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67480.peg.1602 CDS gi|543387792|gb|AVFF01000017.1| 50611 49697 -1 - 915 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67480.peg.1603 CDS gi|543387792|gb|AVFF01000017.1| 51145 50621 -1 - 525 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67480.peg.1604 CDS gi|543387891|gb|AVFF01000016.1| 103 240 1 + 138 hypothetical protein - none -
fig|6666666.67480.peg.1605 CDS gi|543387891|gb|AVFF01000016.1| 237 1598 3 + 1362 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.67480.peg.1606 CDS gi|543387891|gb|AVFF01000016.1| 1718 3622 2 + 1905 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.67480.peg.1607 CDS gi|543387891|gb|AVFF01000016.1| 4049 3765 -2 - 285 FIG00546846: hypothetical protein - none -
fig|6666666.67480.peg.1608 CDS gi|543387891|gb|AVFF01000016.1| 4600 5073 1 + 474 hypothetical protein - none -
fig|6666666.67480.peg.1609 CDS gi|543387891|gb|AVFF01000016.1| 5944 7326 1 + 1383 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.67480.peg.1610 CDS gi|543387891|gb|AVFF01000016.1| 7706 8872 2 + 1167 putative integrase - none -
fig|6666666.67480.peg.1611 CDS gi|543387891|gb|AVFF01000016.1| 8924 9412 2 + 489 hypothetical protein - none -
fig|6666666.67480.peg.1612 CDS gi|543387891|gb|AVFF01000016.1| 9409 9798 1 + 390 hypothetical protein - none -
fig|6666666.67480.peg.1613 CDS gi|543387891|gb|AVFF01000016.1| 10549 9878 -1 - 672 Putative DNA-binding protein in cluster with Type I restriction-modification system - none -
fig|6666666.67480.peg.1614 CDS gi|543387891|gb|AVFF01000016.1| 10858 10977 1 + 120 hypothetical protein - none -
fig|6666666.67480.peg.1615 CDS gi|543387891|gb|AVFF01000016.1| 12725 11130 -2 - 1596 FIG00545850: hypothetical protein - none -
fig|6666666.67480.peg.1616 CDS gi|543387891|gb|AVFF01000016.1| 12860 14032 2 + 1173 hypothetical protein - none -
fig|6666666.67480.peg.1617 CDS gi|543387891|gb|AVFF01000016.1| 14569 14060 -1 - 510 hypothetical protein - none -
fig|6666666.67480.peg.1618 CDS gi|543387891|gb|AVFF01000016.1| 14616 14939 3 + 324 hypothetical protein - none -
fig|6666666.67480.peg.1619 CDS gi|543387891|gb|AVFF01000016.1| 14980 15114 1 + 135 hypothetical protein - none -
fig|6666666.67480.peg.1620 CDS gi|543387891|gb|AVFF01000016.1| 16688 15324 -2 - 1365 Magnesium citrate secondary transporter - none -
fig|6666666.67480.peg.1621 CDS gi|543387891|gb|AVFF01000016.1| 16793 16912 2 + 120 hypothetical protein - none -
fig|6666666.67480.peg.1622 CDS gi|543387891|gb|AVFF01000016.1| 16902 18110 3 + 1209 hypothetical protein - none -
fig|6666666.67480.peg.1623 CDS gi|543387891|gb|AVFF01000016.1| 18149 18970 2 + 822 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67480.peg.1624 CDS gi|543387891|gb|AVFF01000016.1| 19034 19870 2 + 837 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.67480.peg.1625 CDS gi|543387891|gb|AVFF01000016.1| 20874 19945 -3 - 930 hypothetical protein - none -
fig|6666666.67480.peg.1626 CDS gi|543387891|gb|AVFF01000016.1| 21531 21208 -3 - 324 hypothetical protein - none -
fig|6666666.67480.peg.1627 CDS gi|543387891|gb|AVFF01000016.1| 21886 22590 1 + 705 hypothetical protein - none -
fig|6666666.67480.peg.1628 CDS gi|543387891|gb|AVFF01000016.1| 22580 25243 2 + 2664 hypothetical protein - none -
fig|6666666.67480.peg.1629 CDS gi|543387891|gb|AVFF01000016.1| 26018 25422 -2 - 597 hypothetical protein - none -
fig|6666666.67480.peg.1630 CDS gi|543387891|gb|AVFF01000016.1| 28427 26349 -2 - 2079 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Dehydrogenase complexes;
Methionine Degradation
fig|6666666.67480.peg.1631 CDS gi|543387891|gb|AVFF01000016.1| 29119 28424 -1 - 696 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Dehydrogenase complexes;
Methionine Degradation
fig|6666666.67480.peg.1632 CDS gi|543387891|gb|AVFF01000016.1| 29153 29302 2 + 150 hypothetical protein - none -
fig|6666666.67480.peg.1633 CDS gi|543387891|gb|AVFF01000016.1| 29456 29899 2 + 444 FIG00544601: hypothetical protein - none -
fig|6666666.67480.peg.1634 CDS gi|543387891|gb|AVFF01000016.1| 31410 30223 -3 - 1188 Mobile element protein - none -
fig|6666666.67480.peg.1635 CDS gi|543387891|gb|AVFF01000016.1| 34677 31687 -3 - 2991 hypothetical protein - none -
fig|6666666.67480.peg.1636 CDS gi|543387891|gb|AVFF01000016.1| 35041 36315 1 + 1275 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67480.peg.1637 CDS gi|543387891|gb|AVFF01000016.1| 39244 36473 -1 - 2772 RecD-like DNA helicase YrrC DNA repair, bacterial RecBCD pathway
fig|6666666.67480.peg.1638 CDS gi|543387891|gb|AVFF01000016.1| 41096 39750 -2 - 1347 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67480.peg.1639 CDS gi|543387891|gb|AVFF01000016.1| 42110 41211 -2 - 900 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67480.peg.1640 CDS gi|543387891|gb|AVFF01000016.1| 42699 42274 -3 - 426 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67480.peg.1641 CDS gi|543387891|gb|AVFF01000016.1| 43096 42710 -1 - 387 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67480.peg.1642 CDS gi|543387891|gb|AVFF01000016.1| 43199 43083 -2 - 117 hypothetical protein - none -
fig|6666666.67480.peg.1643 CDS gi|543387891|gb|AVFF01000016.1| 43654 43265 -1 - 390 FIG00545012: hypothetical protein - none -
fig|6666666.67480.peg.1644 CDS gi|543387891|gb|AVFF01000016.1| 43935 43657 -3 - 279 hypothetical protein - none -
fig|6666666.67480.peg.1645 CDS gi|543387891|gb|AVFF01000016.1| 44305 43940 -1 - 366 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis
fig|6666666.67480.peg.1646 CDS gi|543387891|gb|AVFF01000016.1| 45087 44302 -3 - 786 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67480.peg.1647 CDS gi|543387891|gb|AVFF01000016.1| 45883 45173 -1 - 711 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67480.peg.1648 CDS gi|543387891|gb|AVFF01000016.1| 46768 46007 -1 - 762 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) / Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis;
Tryptophan synthesis
fig|6666666.67480.peg.1649 CDS gi|543387891|gb|AVFF01000016.1| 47442 46810 -3 - 633 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67480.peg.1650 CDS gi|543387891|gb|AVFF01000016.1| 47700 47458 -3 - 243 hypothetical protein - none -
fig|6666666.67480.peg.1651 CDS gi|543387891|gb|AVFF01000016.1| 48850 47723 -1 - 1128 putative transport protein - none -
fig|6666666.67480.peg.1652 CDS gi|543387891|gb|AVFF01000016.1| 49065 48898 -3 - 168 hypothetical protein - none -
fig|6666666.67480.peg.1653 CDS gi|543387891|gb|AVFF01000016.1| 49670 49065 -2 - 606 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67480.peg.1654 CDS gi|543387891|gb|AVFF01000016.1| 50761 49667 -1 - 1095 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67480.peg.1655 CDS gi|543387891|gb|AVFF01000016.1| 52090 50765 -1 - 1326 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67480.peg.1656 CDS gi|543387891|gb|AVFF01000016.1| 52649 52113 -2 - 537 hypothetical protein - none -
fig|6666666.67480.peg.1657 CDS gi|543387891|gb|AVFF01000016.1| 53360 52653 -2 - 708 hypothetical protein - none -
fig|6666666.67480.peg.1658 CDS gi|543387967|gb|AVFF01000015.1| 570 241 -3 - 330 hypothetical protein - none -
fig|6666666.67480.peg.1659 CDS gi|543387967|gb|AVFF01000015.1| 1393 1097 -1 - 297 hypothetical protein - none -
fig|6666666.67480.peg.1660 CDS gi|543387967|gb|AVFF01000015.1| 1767 1384 -3 - 384 hypothetical protein - none -
fig|6666666.67480.peg.1661 CDS gi|543387967|gb|AVFF01000015.1| 2578 3408 1 + 831 Putative membrane protein - none -
fig|6666666.67480.peg.1662 CDS gi|543387967|gb|AVFF01000015.1| 3902 3405 -2 - 498 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.67480.peg.1663 CDS gi|543387967|gb|AVFF01000015.1| 4588 4001 -1 - 588 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.67480.peg.1664 CDS gi|543387967|gb|AVFF01000015.1| 6870 4630 -3 - 2241 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67480.peg.1665 CDS gi|543387967|gb|AVFF01000015.1| 8230 6872 -1 - 1359 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.1666 CDS gi|543387967|gb|AVFF01000015.1| 8608 8246 -1 - 363 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.1667 CDS gi|543387967|gb|AVFF01000015.1| 9356 8628 -2 - 729 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67480.peg.1668 CDS gi|543387967|gb|AVFF01000015.1| 10357 9353 -1 - 1005 Thiamine-monophosphate kinase (EC 2.7.4.16) Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67480.peg.1669 CDS gi|543387967|gb|AVFF01000015.1| 10545 10838 3 + 294 hypothetical protein - none -
fig|6666666.67480.peg.1670 CDS gi|543387967|gb|AVFF01000015.1| 10789 11571 1 + 783 Putative exported protein - none -
fig|6666666.67480.peg.1671 CDS gi|543387967|gb|AVFF01000015.1| 12685 11624 -1 - 1062 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67480.peg.1672 CDS gi|543387967|gb|AVFF01000015.1| 13726 12734 -1 - 993 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.1673 CDS gi|543387967|gb|AVFF01000015.1| 13781 14812 2 + 1032 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67480.peg.1674 CDS gi|543387967|gb|AVFF01000015.1| 15399 14809 -3 - 591 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67480.peg.1675 CDS gi|543387967|gb|AVFF01000015.1| 16852 15431 -1 - 1422 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67480.peg.1676 CDS gi|543387967|gb|AVFF01000015.1| 16894 17595 1 + 702 Transcriptional regulator, IclR family - none -
fig|6666666.67480.peg.1677 CDS gi|543387967|gb|AVFF01000015.1| 17636 19189 2 + 1554 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase;
EC699-706
fig|6666666.67480.peg.1678 CDS gi|543387967|gb|AVFF01000015.1| 20643 19270 -3 - 1374 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) - none -
fig|6666666.67480.peg.1679 CDS gi|543387967|gb|AVFF01000015.1| 21106 20951 -1 - 156 hypothetical protein - none -
fig|6666666.67480.peg.1680 CDS gi|543387967|gb|AVFF01000015.1| 21138 22115 3 + 978 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism
fig|6666666.67480.peg.1681 CDS gi|543387967|gb|AVFF01000015.1| 22349 22131 -2 - 219 hypothetical protein - none -
fig|6666666.67480.peg.1682 CDS gi|543387967|gb|AVFF01000015.1| 23900 23061 -2 - 840 Putative secreted hydrolase - none -
fig|6666666.67480.peg.1683 CDS gi|543387967|gb|AVFF01000015.1| 24366 24073 -3 - 294 hypothetical protein - none -
fig|6666666.67480.peg.1684 CDS gi|543387967|gb|AVFF01000015.1| 26364 24865 -3 - 1500 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67480.peg.1685 CDS gi|543387967|gb|AVFF01000015.1| 26414 27511 2 + 1098 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67480.peg.1686 CDS gi|543387967|gb|AVFF01000015.1| 28376 27582 -2 - 795 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67480.peg.1687 CDS gi|543387967|gb|AVFF01000015.1| 28748 28410 -2 - 339 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67480.peg.1688 CDS gi|543387967|gb|AVFF01000015.1| 30943 29078 -1 - 1866 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67480.peg.1689 CDS gi|543387967|gb|AVFF01000015.1| 32791 31019 -1 - 1773 FIG00545237: hypothetical protein - none -
fig|6666666.67480.peg.1690 CDS gi|543387967|gb|AVFF01000015.1| 33821 32802 -2 - 1020 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67480.peg.1691 CDS gi|543387967|gb|AVFF01000015.1| 34080 33916 -3 - 165 hypothetical protein - none -
fig|6666666.67480.peg.1692 CDS gi|543387967|gb|AVFF01000015.1| 34759 34070 -1 - 690 hypothetical protein - none -
fig|6666666.67480.peg.1693 CDS gi|543387967|gb|AVFF01000015.1| 34892 35443 2 + 552 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67480.peg.1694 CDS gi|543387967|gb|AVFF01000015.1| 35502 35618 3 + 117 hypothetical protein - none -
fig|6666666.67480.peg.1695 CDS gi|543387967|gb|AVFF01000015.1| 35615 36868 2 + 1254 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67480.peg.1696 CDS gi|543387967|gb|AVFF01000015.1| 38554 36974 -1 - 1581 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67480.peg.1697 CDS gi|543387967|gb|AVFF01000015.1| 39611 38685 -2 - 927 Putative lipoprotein - none -
fig|6666666.67480.peg.1698 CDS gi|543387967|gb|AVFF01000015.1| 40635 39622 -3 - 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67480.peg.1699 CDS gi|543387967|gb|AVFF01000015.1| 41256 40741 -3 - 516 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67480.peg.1700 CDS gi|543387967|gb|AVFF01000015.1| 43130 41259 -2 - 1872 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67480.peg.1701 CDS gi|543387967|gb|AVFF01000015.1| 43446 44678 3 + 1233 FIG00544780: hypothetical protein - none -
fig|6666666.67480.peg.1702 CDS gi|543387967|gb|AVFF01000015.1| 44711 45298 2 + 588 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67480.peg.1703 CDS gi|543387967|gb|AVFF01000015.1| 45420 47261 3 + 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67480.peg.1704 CDS gi|543387967|gb|AVFF01000015.1| 47275 48552 1 + 1278 FIG00546232: hypothetical protein - none -
fig|6666666.67480.peg.1705 CDS gi|543387967|gb|AVFF01000015.1| 49742 48549 -2 - 1194 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67480.peg.1706 CDS gi|543387967|gb|AVFF01000015.1| 50576 49809 -2 - 768 hypothetical protein - none -
fig|6666666.67480.peg.1707 CDS gi|543387967|gb|AVFF01000015.1| 50689 51783 1 + 1095 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67480.peg.1708 CDS gi|543387967|gb|AVFF01000015.1| 53225 51813 -2 - 1413 hypothetical protein - none -
fig|6666666.67480.peg.1709 CDS gi|543387967|gb|AVFF01000015.1| 54866 53319 -2 - 1548 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67480.peg.1710 CDS gi|543387967|gb|AVFF01000015.1| 55122 54886 -3 - 237 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.1711 CDS gi|543388045|gb|AVFF01000014.1| 1577 774 -2 - 804 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.67480.peg.1712 CDS gi|543388045|gb|AVFF01000014.1| 1806 1955 3 + 150 hypothetical protein - none -
fig|6666666.67480.peg.1713 CDS gi|543388045|gb|AVFF01000014.1| 2194 5451 1 + 3258 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67480.peg.1714 CDS gi|543388045|gb|AVFF01000014.1| 5913 6920 3 + 1008 hypothetical protein - none -
fig|6666666.67480.peg.1715 CDS gi|543388045|gb|AVFF01000014.1| 7120 8217 1 + 1098 hypothetical protein - none -
fig|6666666.67480.peg.1716 CDS gi|543388045|gb|AVFF01000014.1| 8253 8855 3 + 603 hypothetical protein - none -
fig|6666666.67480.peg.1717 CDS gi|543388045|gb|AVFF01000014.1| 9488 10669 2 + 1182 hypothetical protein - none -
fig|6666666.67480.peg.1718 CDS gi|543388045|gb|AVFF01000014.1| 10770 11072 3 + 303 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67480.peg.1719 CDS gi|543388045|gb|AVFF01000014.1| 11118 11429 3 + 312 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67480.peg.1720 CDS gi|543388045|gb|AVFF01000014.1| 11483 13195 2 + 1713 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67480.peg.1721 CDS gi|543388045|gb|AVFF01000014.1| 13244 13717 2 + 474 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67480.peg.1722 CDS gi|543388045|gb|AVFF01000014.1| 13698 14447 3 + 750 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67480.peg.1723 CDS gi|543388045|gb|AVFF01000014.1| 14529 15143 3 + 615 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67480.peg.1724 CDS gi|543388045|gb|AVFF01000014.1| 15145 16020 1 + 876 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67480.peg.1725 CDS gi|543388045|gb|AVFF01000014.1| 16395 16090 -3 - 306 putative mercury resistance operon regulator MerR - none -
fig|6666666.67480.peg.1726 CDS gi|543388045|gb|AVFF01000014.1| 16492 16836 1 + 345 hypothetical protein - none -
fig|6666666.67480.peg.1727 CDS gi|543388045|gb|AVFF01000014.1| 16866 17060 3 + 195 hypothetical protein - none -
fig|6666666.67480.peg.1728 CDS gi|543388045|gb|AVFF01000014.1| 17078 17635 2 + 558 ABC transporter (iron.B12.siderophore.hemin) , permease component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67480.peg.1729 CDS gi|543388045|gb|AVFF01000014.1| 17632 17889 1 + 258 Probable ATP-binding component of ABC transporter - none -
fig|6666666.67480.peg.1730 CDS gi|543388045|gb|AVFF01000014.1| 17886 18554 3 + 669 ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67480.peg.1731 CDS gi|543388045|gb|AVFF01000014.1| 18536 18712 2 + 177 hypothetical protein - none -
fig|6666666.67480.peg.1732 CDS gi|543388045|gb|AVFF01000014.1| 18755 19285 2 + 531 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.67480.peg.1733 CDS gi|543388045|gb|AVFF01000014.1| 20270 19308 -2 - 963 hypothetical protein - none -
fig|6666666.67480.peg.1734 CDS gi|543388045|gb|AVFF01000014.1| 20521 20393 -1 - 129 hypothetical protein - none -
fig|6666666.67480.peg.1735 CDS gi|543388045|gb|AVFF01000014.1| 20679 20999 3 + 321 hypothetical protein - none -
fig|6666666.67480.peg.1736 CDS gi|543388045|gb|AVFF01000014.1| 21088 21531 1 + 444 hypothetical protein - none -
fig|6666666.67480.peg.1737 CDS gi|543388045|gb|AVFF01000014.1| 21611 23050 2 + 1440 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67480.peg.1738 CDS gi|543388045|gb|AVFF01000014.1| 24024 23047 -3 - 978 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67480.peg.1739 CDS gi|543388045|gb|AVFF01000014.1| 24111 24734 3 + 624 Putative secreted protein - none -
fig|6666666.67480.peg.1740 CDS gi|543388045|gb|AVFF01000014.1| 26510 24837 -2 - 1674 L-lactate permease Lactate utilization
fig|6666666.67480.peg.1741 CDS gi|543388045|gb|AVFF01000014.1| 27944 26883 -2 - 1062 FIG00544955: hypothetical protein - none -
fig|6666666.67480.peg.1742 CDS gi|543388045|gb|AVFF01000014.1| 28202 28729 2 + 528 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67480.peg.1743 CDS gi|543388045|gb|AVFF01000014.1| 28719 29402 3 + 684 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67480.peg.1744 CDS gi|543388045|gb|AVFF01000014.1| 29407 29655 1 + 249 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67480.peg.1745 CDS gi|543388045|gb|AVFF01000014.1| 29735 30505 2 + 771 hypothetical protein - none -
fig|6666666.67480.peg.1746 CDS gi|543388045|gb|AVFF01000014.1| 30516 30707 3 + 192 hypothetical protein - none -
fig|6666666.67480.peg.1747 CDS gi|543388045|gb|AVFF01000014.1| 30731 34309 2 + 3579 DNA polymerase III alpha subunit (EC 2.7.7.7) Phage replication
fig|6666666.67480.peg.1748 CDS gi|543388045|gb|AVFF01000014.1| 34395 35696 3 + 1302 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67480.peg.1749 CDS gi|543388045|gb|AVFF01000014.1| 35710 36357 1 + 648 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.67480.peg.1750 CDS gi|543388045|gb|AVFF01000014.1| 36370 36600 1 + 231 hypothetical protein - none -
fig|6666666.67480.peg.1751 CDS gi|543388045|gb|AVFF01000014.1| 36609 37007 3 + 399 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67480.peg.1752 CDS gi|543388045|gb|AVFF01000014.1| 37252 37064 -1 - 189 hypothetical protein - none -
fig|6666666.67480.peg.1753 CDS gi|543388045|gb|AVFF01000014.1| 40821 37900 -3 - 2922 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67480.peg.1754 CDS gi|543388045|gb|AVFF01000014.1| 41010 40876 -3 - 135 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization
fig|6666666.67480.peg.1755 CDS gi|543388045|gb|AVFF01000014.1| 41648 40962 -2 - 687 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization
fig|6666666.67480.peg.1756 CDS gi|543388045|gb|AVFF01000014.1| 42872 41688 -2 - 1185 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization
fig|6666666.67480.peg.1757 CDS gi|543388045|gb|AVFF01000014.1| 42969 43967 3 + 999 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67480.peg.1758 CDS gi|543388045|gb|AVFF01000014.1| 43970 44974 2 + 1005 Putative sugar kinase - none -
fig|6666666.67480.peg.1759 CDS gi|543388045|gb|AVFF01000014.1| 45127 45858 1 + 732 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) - none -
fig|6666666.67480.peg.1760 CDS gi|543388045|gb|AVFF01000014.1| 46606 45905 -1 - 702 Transcriptional regulator, GntR family - none -
fig|6666666.67480.peg.1761 CDS gi|543388045|gb|AVFF01000014.1| 46976 48619 2 + 1644 Putative transport system secreted protein - none -
fig|6666666.67480.peg.1762 CDS gi|543388045|gb|AVFF01000014.1| 48631 49596 1 + 966 ABC-type transporter, permease component - none -
fig|6666666.67480.peg.1763 CDS gi|543388045|gb|AVFF01000014.1| 49596 51305 3 + 1710 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) - none -
fig|6666666.67480.peg.1764 CDS gi|543388045|gb|AVFF01000014.1| 51284 51649 2 + 366 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) - none -
fig|6666666.67480.peg.1765 CDS gi|543388045|gb|AVFF01000014.1| 51876 52487 3 + 612 Putative oligopeptide transport system ATP-binding protein - none -
fig|6666666.67480.peg.1766 CDS gi|543388045|gb|AVFF01000014.1| 52756 52556 -1 - 201 hypothetical protein - none -
fig|6666666.67480.peg.1767 CDS gi|543388045|gb|AVFF01000014.1| 52804 53274 1 + 471 Putative secreted protease - none -
fig|6666666.67480.peg.1768 CDS gi|543388045|gb|AVFF01000014.1| 54945 53311 -3 - 1635 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.67480.peg.1769 CDS gi|543388045|gb|AVFF01000014.1| 56544 55156 -3 - 1389 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67480.peg.1770 CDS gi|543388045|gb|AVFF01000014.1| 56969 56628 -2 - 342 hypothetical protein - none -
fig|6666666.67480.peg.1771 CDS gi|543388140|gb|AVFF01000013.1| 1540 275 -1 - 1266 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67480.peg.1772 CDS gi|543388140|gb|AVFF01000013.1| 1674 1543 -3 - 132 hypothetical protein - none -
fig|6666666.67480.peg.1773 CDS gi|543388140|gb|AVFF01000013.1| 3198 1744 -3 - 1455 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67480.peg.1774 CDS gi|543388140|gb|AVFF01000013.1| 4400 3198 -2 - 1203 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67480.peg.1775 CDS gi|543388140|gb|AVFF01000013.1| 5059 4562 -1 - 498 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67480.peg.1776 CDS gi|543388140|gb|AVFF01000013.1| 6051 5056 -3 - 996 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67480.peg.1777 CDS gi|543388140|gb|AVFF01000013.1| 7232 6060 -2 - 1173 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67480.peg.1778 CDS gi|543388140|gb|AVFF01000013.1| 8170 7229 -1 - 942 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67480.peg.1779 CDS gi|543388140|gb|AVFF01000013.1| 9383 8208 -2 - 1176 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67480.peg.1780 CDS gi|543388140|gb|AVFF01000013.1| 10602 9559 -3 - 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67480.peg.1781 CDS gi|543388140|gb|AVFF01000013.1| 10754 11773 2 + 1020 Formamidase amiF (EC 3.5.1.49) - none -
fig|6666666.67480.peg.1782 CDS gi|543388140|gb|AVFF01000013.1| 12113 13630 2 + 1518 L-asparagine permease - none -
fig|6666666.67480.peg.1783 CDS gi|543388140|gb|AVFF01000013.1| 13722 14750 3 + 1029 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67480.peg.1784 CDS gi|543388140|gb|AVFF01000013.1| 17527 15023 -1 - 2505 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67480.peg.1785 CDS gi|543388140|gb|AVFF01000013.1| 18615 17557 -3 - 1059 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67480.peg.1786 CDS gi|543388140|gb|AVFF01000013.1| 19558 18737 -1 - 822 FIG011178: rRNA methylase RNA methylation
fig|6666666.67480.peg.1787 CDS gi|543388140|gb|AVFF01000013.1| 20046 19663 -3 - 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67480.peg.1788 CDS gi|543388140|gb|AVFF01000013.1| 20299 20105 -1 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67480.peg.1789 CDS gi|543388140|gb|AVFF01000013.1| 20677 20333 -1 - 345 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67480.peg.1790 CDS gi|543388140|gb|AVFF01000013.1| 22938 21169 -3 - 1770 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67480.peg.1791 CDS gi|543388140|gb|AVFF01000013.1| 23774 23046 -2 - 729 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67480.peg.1792 CDS gi|543388140|gb|AVFF01000013.1| 24178 24738 1 + 561 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67480.peg.1793 CDS gi|543388140|gb|AVFF01000013.1| 24831 25682 3 + 852 hypothetical protein - none -
fig|6666666.67480.peg.1794 CDS gi|543388140|gb|AVFF01000013.1| 25697 28006 2 + 2310 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67480.peg.1795 CDS gi|543388140|gb|AVFF01000013.1| 28561 28094 -1 - 468 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67480.peg.1796 CDS gi|543388140|gb|AVFF01000013.1| 29074 28604 -1 - 471 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67480.peg.1797 CDS gi|543388140|gb|AVFF01000013.1| 31298 29193 -2 - 2106 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67480.peg.1798 CDS gi|543388140|gb|AVFF01000013.1| 31934 31317 -2 - 618 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67480.peg.1799 CDS gi|543388140|gb|AVFF01000013.1| 33517 32051 -1 - 1467 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.67480.peg.1800 CDS gi|543388140|gb|AVFF01000013.1| 33554 33727 2 + 174 hypothetical protein - none -
fig|6666666.67480.peg.1801 CDS gi|543388140|gb|AVFF01000013.1| 35424 33886 -3 - 1539 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.67480.peg.1802 CDS gi|543388140|gb|AVFF01000013.1| 35925 36776 3 + 852 ABC-type transporter, permease component - none -
fig|6666666.67480.peg.1803 CDS gi|543388140|gb|AVFF01000013.1| 36843 37526 3 + 684 ABC-type transporter, permease component - none -
fig|6666666.67480.peg.1804 CDS gi|543388140|gb|AVFF01000013.1| 37453 37806 1 + 354 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67480.peg.1805 CDS gi|543388140|gb|AVFF01000013.1| 37809 39497 3 + 1689 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.1806 CDS gi|543388140|gb|AVFF01000013.1| 39595 41346 1 + 1752 Iron-chelator utilization protein - none -
fig|6666666.67480.peg.1807 CDS gi|543388140|gb|AVFF01000013.1| 44052 41440 -3 - 2613 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67480.peg.1808 CDS gi|543388140|gb|AVFF01000013.1| 44536 44165 -1 - 372 hypothetical protein - none -
fig|6666666.67480.peg.1809 CDS gi|543388140|gb|AVFF01000013.1| 44853 45017 3 + 165 hypothetical protein - none -
fig|6666666.67480.peg.1810 CDS gi|543388140|gb|AVFF01000013.1| 45109 45786 1 + 678 putative helicase - none -
fig|6666666.67480.peg.1811 CDS gi|543388140|gb|AVFF01000013.1| 45863 46207 2 + 345 putative helicase - none -
fig|6666666.67480.peg.1812 CDS gi|543388140|gb|AVFF01000013.1| 46204 46374 1 + 171 putative helicase - none -
fig|6666666.67480.peg.1813 CDS gi|543388140|gb|AVFF01000013.1| 46374 50060 3 + 3687 putative helicase - none -
fig|6666666.67480.peg.1814 CDS gi|543388140|gb|AVFF01000013.1| 50186 50425 2 + 240 putative helicase - none -
fig|6666666.67480.peg.1815 CDS gi|543388140|gb|AVFF01000013.1| 51332 51466 2 + 135 hypothetical protein - none -
fig|6666666.67480.peg.1816 CDS gi|543388140|gb|AVFF01000013.1| 52672 51815 -1 - 858 iron-siderophore binding lipoprotein - none -
fig|6666666.67480.peg.1817 CDS gi|543388140|gb|AVFF01000013.1| 52788 52669 -3 - 120 hypothetical protein - none -
fig|6666666.67480.peg.1818 CDS gi|543388140|gb|AVFF01000013.1| 52973 53113 2 + 141 hypothetical protein - none -
fig|6666666.67480.peg.1819 CDS gi|543388140|gb|AVFF01000013.1| 53704 53994 1 + 291 hypothetical protein - none -
fig|6666666.67480.peg.1820 CDS gi|543388140|gb|AVFF01000013.1| 54132 54479 3 + 348 hypothetical protein - none -
fig|6666666.67480.peg.1821 CDS gi|543388140|gb|AVFF01000013.1| 55007 55141 2 + 135 hypothetical protein - none -
fig|6666666.67480.peg.1822 CDS gi|543388140|gb|AVFF01000013.1| 55578 55745 3 + 168 hypothetical protein - none -
fig|6666666.67480.peg.1823 CDS gi|543388140|gb|AVFF01000013.1| 55735 55962 1 + 228 hypothetical protein - none -
fig|6666666.67480.peg.1824 CDS gi|543388140|gb|AVFF01000013.1| 56375 56004 -2 - 372 hypothetical protein - none -
fig|6666666.67480.peg.1825 CDS gi|543388140|gb|AVFF01000013.1| 57389 57736 2 + 348 hypothetical protein - none -
fig|6666666.67480.peg.1826 CDS gi|543388140|gb|AVFF01000013.1| 57986 58135 2 + 150 hypothetical protein - none -
fig|6666666.67480.peg.1827 CDS gi|543388140|gb|AVFF01000013.1| 58547 58395 -2 - 153 hypothetical protein - none -
fig|6666666.67480.peg.1828 CDS gi|543388140|gb|AVFF01000013.1| 58938 58609 -3 - 330 hypothetical protein - none -
fig|6666666.67480.peg.1829 CDS gi|543388140|gb|AVFF01000013.1| 60370 59771 -1 - 600 gp6 - none -
fig|6666666.67480.peg.1830 CDS gi|543388140|gb|AVFF01000013.1| 60594 60406 -3 - 189 Mobile element protein - none -
fig|6666666.67480.peg.1831 CDS gi|543388248|gb|AVFF01000012.1| 22 726 1 + 705 Heat shock protein 22.5 (Hsp22.5) - none -
fig|6666666.67480.peg.1832 CDS gi|543388248|gb|AVFF01000012.1| 764 1222 2 + 459 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67480.peg.1833 CDS gi|543388248|gb|AVFF01000012.1| 1455 1216 -3 - 240 hypothetical protein - none -
fig|6666666.67480.peg.1834 CDS gi|543388248|gb|AVFF01000012.1| 2131 1538 -1 - 594 molybdopterin biosynthesis enzyme - none -
fig|6666666.67480.peg.1835 CDS gi|543388248|gb|AVFF01000012.1| 3567 2185 -3 - 1383 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67480.peg.1836 CDS gi|543388248|gb|AVFF01000012.1| 4008 3835 -3 - 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67480.peg.1837 CDS gi|543388248|gb|AVFF01000012.1| 4291 4028 -1 - 264 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67480.peg.1838 CDS gi|543388248|gb|AVFF01000012.1| 4623 4871 3 + 249 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67480.peg.1839 CDS gi|543388248|gb|AVFF01000012.1| 4909 5073 1 + 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67480.peg.1840 CDS gi|543388248|gb|AVFF01000012.1| 5077 5382 1 + 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.67480.peg.1841 CDS gi|543388248|gb|AVFF01000012.1| 5398 5652 1 + 255 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.67480.peg.1842 CDS gi|543388248|gb|AVFF01000012.1| 5875 6543 1 + 669 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.1843 CDS gi|543388248|gb|AVFF01000012.1| 6668 7489 2 + 822 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67480.peg.1844 CDS gi|543388248|gb|AVFF01000012.1| 7498 8469 1 + 972 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67480.peg.1845 CDS gi|543388248|gb|AVFF01000012.1| 8863 8744 -1 - 120 hypothetical protein - none -
fig|6666666.67480.peg.1846 CDS gi|543388248|gb|AVFF01000012.1| 9022 9873 1 + 852 hypothetical protein - none -
fig|6666666.67480.peg.1847 CDS gi|543388248|gb|AVFF01000012.1| 9884 10891 2 + 1008 FIG00544157: hypothetical protein - none -
fig|6666666.67480.peg.1848 CDS gi|543388248|gb|AVFF01000012.1| 12694 11030 -1 - 1665 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) A hypothetical coupled to de Novo Purine Biosynthesis;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67480.peg.1849 CDS gi|543388248|gb|AVFF01000012.1| 13414 12908 -1 - 507 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67480.peg.1850 CDS gi|543388248|gb|AVFF01000012.1| 14871 13426 -3 - 1446 FIG021574: Possible membrane protein related to de Novo purine biosynthesis A hypothetical coupled to de Novo Purine Biosynthesis
fig|6666666.67480.peg.1851 CDS gi|543388248|gb|AVFF01000012.1| 15496 16248 1 + 753 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67480.peg.1852 CDS gi|543388248|gb|AVFF01000012.1| 16685 17428 2 + 744 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67480.peg.1853 CDS gi|543388248|gb|AVFF01000012.1| 19974 17434 -3 - 2541 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67480.peg.1854 CDS gi|543388248|gb|AVFF01000012.1| 20056 20367 1 + 312 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67480.peg.1855 CDS gi|543388248|gb|AVFF01000012.1| 20680 21027 1 + 348 hypothetical protein - none -
fig|6666666.67480.peg.1856 CDS gi|543388248|gb|AVFF01000012.1| 21098 21226 2 + 129 hypothetical protein - none -
fig|6666666.67480.peg.1857 CDS gi|543388248|gb|AVFF01000012.1| 21307 22359 1 + 1053 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67480.peg.1858 CDS gi|543388248|gb|AVFF01000012.1| 22363 22890 1 + 528 NADH-FMN oxidoreductase - none -
fig|6666666.67480.peg.1859 CDS gi|543388248|gb|AVFF01000012.1| 23193 24284 3 + 1092 FIG00544841: hypothetical protein - none -
fig|6666666.67480.peg.1860 CDS gi|543388248|gb|AVFF01000012.1| 24281 25303 2 + 1023 Putative uncharacterized protein BCG_3873 - none -
fig|6666666.67480.peg.1861 CDS gi|543388248|gb|AVFF01000012.1| 25513 26499 1 + 987 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67480.peg.1862 CDS gi|543388248|gb|AVFF01000012.1| 26496 28166 3 + 1671 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.1863 CDS gi|543388248|gb|AVFF01000012.1| 29059 28163 -1 - 897 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67480.peg.1864 CDS gi|543388248|gb|AVFF01000012.1| 31144 29192 -1 - 1953 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67480.peg.1865 CDS gi|543388248|gb|AVFF01000012.1| 33948 31141 -3 - 2808 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67480.peg.1866 CDS gi|543388248|gb|AVFF01000012.1| 34057 34815 1 + 759 inositol monophosphatase family protein - none -
fig|6666666.67480.peg.1867 CDS gi|543388248|gb|AVFF01000012.1| 34937 35803 2 + 867 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.67480.peg.1868 CDS gi|543388248|gb|AVFF01000012.1| 35809 36348 1 + 540 Dihydrofolate reductase (EC 1.5.1.3) Folate Biosynthesis
fig|6666666.67480.peg.1869 CDS gi|543388248|gb|AVFF01000012.1| 36349 36636 1 + 288 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.67480.peg.1870 CDS gi|543388248|gb|AVFF01000012.1| 37134 38132 3 + 999 Putative secreted protein - none -
fig|6666666.67480.peg.1871 CDS gi|543388248|gb|AVFF01000012.1| 39171 38179 -3 - 993 FIG00544899: hypothetical protein - none -
fig|6666666.67480.peg.1872 CDS gi|543388248|gb|AVFF01000012.1| 40924 39272 -1 - 1653 putative transport protein - none -
fig|6666666.67480.peg.1873 CDS gi|543388248|gb|AVFF01000012.1| 41305 40964 -1 - 342 FIG00544151: hypothetical protein - none -
fig|6666666.67480.peg.1874 CDS gi|543388248|gb|AVFF01000012.1| 42579 41707 -3 - 873 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67480.peg.1875 CDS gi|543388248|gb|AVFF01000012.1| 43020 42652 -3 - 369 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67480.peg.1876 CDS gi|543388248|gb|AVFF01000012.1| 44593 43220 -1 - 1374 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
TCA Cycle
fig|6666666.67480.peg.1877 CDS gi|543388248|gb|AVFF01000012.1| 44779 45921 1 + 1143 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67480.peg.1878 CDS gi|543388248|gb|AVFF01000012.1| 45958 47187 1 + 1230 FIG00545091: hypothetical protein - none -
fig|6666666.67480.peg.1879 CDS gi|543388248|gb|AVFF01000012.1| 47430 48395 3 + 966 FIG00544583: hypothetical protein - none -
fig|6666666.67480.peg.1880 CDS gi|543388248|gb|AVFF01000012.1| 49345 48410 -1 - 936 hypothetical protein - none -
fig|6666666.67480.peg.1881 CDS gi|543388248|gb|AVFF01000012.1| 49714 49394 -1 - 321 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67480.peg.1882 CDS gi|543388248|gb|AVFF01000012.1| 50964 49705 -3 - 1260 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67480.peg.1883 CDS gi|543388248|gb|AVFF01000012.1| 51099 51968 3 + 870 glutamine cyclotransferase - none -
fig|6666666.67480.peg.1884 CDS gi|543388248|gb|AVFF01000012.1| 51985 52524 1 + 540 hypothetical protein - none -
fig|6666666.67480.peg.1885 CDS gi|543388248|gb|AVFF01000012.1| 52939 52538 -1 - 402 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67480.peg.1886 CDS gi|543388248|gb|AVFF01000012.1| 53449 54213 1 + 765 secreted protein - none -
fig|6666666.67480.peg.1887 CDS gi|543388248|gb|AVFF01000012.1| 54501 54310 -3 - 192 FIG00543815: hypothetical protein - none -
fig|6666666.67480.peg.1888 CDS gi|543388248|gb|AVFF01000012.1| 54573 57233 3 + 2661 hypothetical protein - none -
fig|6666666.67480.peg.1889 CDS gi|543388248|gb|AVFF01000012.1| 57434 57315 -2 - 120 hypothetical protein - none -
fig|6666666.67480.peg.1890 CDS gi|543388248|gb|AVFF01000012.1| 57603 59297 3 + 1695 DNA repair helicase - none -
fig|6666666.67480.peg.1891 CDS gi|543388248|gb|AVFF01000012.1| 59403 60059 3 + 657 FIG00546748: hypothetical protein - none -
fig|6666666.67480.peg.1892 CDS gi|543388248|gb|AVFF01000012.1| 60419 60081 -2 - 339 putative integral membrane protein - none -
fig|6666666.67480.peg.1893 CDS gi|543388354|gb|AVFF01000011.1| 2063 996 -2 - 1068 hypothetical protein - none -
fig|6666666.67480.peg.1894 CDS gi|543388354|gb|AVFF01000011.1| 2709 2170 -3 - 540 Flavodoxin Flavodoxin
fig|6666666.67480.peg.1895 CDS gi|543388354|gb|AVFF01000011.1| 2699 2845 2 + 147 hypothetical protein - none -
fig|6666666.67480.peg.1896 CDS gi|543388354|gb|AVFF01000011.1| 3219 4379 3 + 1161 hypothetical protein - none -
fig|6666666.67480.peg.1897 CDS gi|543388354|gb|AVFF01000011.1| 4915 4529 -1 - 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67480.peg.1898 CDS gi|543388354|gb|AVFF01000011.1| 5055 4930 -3 - 126 hypothetical protein - none -
fig|6666666.67480.peg.1899 CDS gi|543388354|gb|AVFF01000011.1| 5587 5066 -1 - 522 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67480.peg.1900 CDS gi|543388354|gb|AVFF01000011.1| 5666 5812 2 + 147 hypothetical protein - none -
fig|6666666.67480.peg.1901 CDS gi|543388354|gb|AVFF01000011.1| 6438 5875 -3 - 564 Phytoene dehydrogenase and related proteins - none -
fig|6666666.67480.peg.1902 CDS gi|543388354|gb|AVFF01000011.1| 7427 6429 -2 - 999 Phytoene dehydrogenase and related proteins - none -
fig|6666666.67480.peg.1903 CDS gi|543388354|gb|AVFF01000011.1| 7627 7472 -1 - 156 hypothetical protein - none -
fig|6666666.67480.peg.1904 CDS gi|543388354|gb|AVFF01000011.1| 7632 7751 3 + 120 hypothetical protein - none -
fig|6666666.67480.peg.1905 CDS gi|543388354|gb|AVFF01000011.1| 8513 8163 -2 - 351 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67480.peg.1906 CDS gi|543388354|gb|AVFF01000011.1| 8872 8573 -1 - 300 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67480.peg.1907 CDS gi|543388354|gb|AVFF01000011.1| 9468 9019 -3 - 450 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67480.peg.1908 CDS gi|543388354|gb|AVFF01000011.1| 10613 9678 -2 - 936 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67480.peg.1909 CDS gi|543388354|gb|AVFF01000011.1| 11067 10735 -3 - 333 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67480.peg.1910 CDS gi|543388354|gb|AVFF01000011.1| 12750 11827 -3 - 924 hypothetical protein - none -
fig|6666666.67480.peg.1911 CDS gi|543388354|gb|AVFF01000011.1| 12722 13888 2 + 1167 Transcriptional regulator, LysR family - none -
fig|6666666.67480.peg.1912 CDS gi|543388354|gb|AVFF01000011.1| 15364 14348 -1 - 1017 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.67480.peg.1913 CDS gi|543388354|gb|AVFF01000011.1| 15469 16908 1 + 1440 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67480.peg.1914 CDS gi|543388354|gb|AVFF01000011.1| 17146 17012 -1 - 135 hypothetical protein - none -
fig|6666666.67480.peg.1915 CDS gi|543388354|gb|AVFF01000011.1| 18946 18131 -1 - 816 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67480.peg.1916 CDS gi|543388354|gb|AVFF01000011.1| 20218 18956 -1 - 1263 Glycosyltransferase - none -
fig|6666666.67480.peg.1917 CDS gi|543388354|gb|AVFF01000011.1| 20797 20225 -1 - 573 Putative membrane protein - none -
fig|6666666.67480.peg.1918 CDS gi|543388354|gb|AVFF01000011.1| 21849 20782 -3 - 1068 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67480.peg.1919 CDS gi|543388354|gb|AVFF01000011.1| 22309 21890 -1 - 420 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67480.peg.1920 CDS gi|543388354|gb|AVFF01000011.1| 22575 22309 -3 - 267 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67480.peg.1921 CDS gi|543388354|gb|AVFF01000011.1| 23465 22698 -2 - 768 hypothetical protein - none -
fig|6666666.67480.peg.1922 CDS gi|543388354|gb|AVFF01000011.1| 24537 23455 -3 - 1083 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67480.peg.1923 CDS gi|543388354|gb|AVFF01000011.1| 26090 24561 -2 - 1530 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67480.peg.1924 CDS gi|543388354|gb|AVFF01000011.1| 27135 26119 -3 - 1017 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67480.peg.1925 CDS gi|543388354|gb|AVFF01000011.1| 27301 28320 1 + 1020 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67480.peg.1926 CDS gi|543388354|gb|AVFF01000011.1| 28443 29606 3 + 1164 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67480.peg.1927 CDS gi|543388354|gb|AVFF01000011.1| 30571 29666 -1 - 906 Aldo-keto reductase - none -
fig|6666666.67480.peg.1928 CDS gi|543388354|gb|AVFF01000011.1| 30939 30814 -3 - 126 hypothetical protein - none -
fig|6666666.67480.peg.1929 CDS gi|543388354|gb|AVFF01000011.1| 31082 31804 2 + 723 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67480.peg.1930 CDS gi|543388354|gb|AVFF01000011.1| 31946 32875 2 + 930 Auxin Efflux Carrier - none -
fig|6666666.67480.peg.1931 CDS gi|543388354|gb|AVFF01000011.1| 33361 32891 -1 - 471 hypothetical protein - none -
fig|6666666.67480.peg.1932 CDS gi|543388354|gb|AVFF01000011.1| 33407 33808 2 + 402 hypothetical protein - none -
fig|6666666.67480.peg.1933 CDS gi|543388354|gb|AVFF01000011.1| 35010 34018 -3 - 993 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67480.peg.1934 CDS gi|543388354|gb|AVFF01000011.1| 36944 35280 -2 - 1665 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67480.peg.1935 CDS gi|543388354|gb|AVFF01000011.1| 37981 37034 -1 - 948 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67480.peg.1936 CDS gi|543388354|gb|AVFF01000011.1| 38650 38024 -1 - 627 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67480.peg.1937 CDS gi|543388354|gb|AVFF01000011.1| 39455 38739 -2 - 717 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.67480.peg.1938 CDS gi|543388354|gb|AVFF01000011.1| 41112 39664 -3 - 1449 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1939 CDS gi|543388354|gb|AVFF01000011.1| 42751 41189 -1 - 1563 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1940 CDS gi|543388354|gb|AVFF01000011.1| 43933 42845 -1 - 1089 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1941 CDS gi|543388354|gb|AVFF01000011.1| 44723 44028 -2 - 696 hypothetical membrane protein - none -
fig|6666666.67480.peg.1942 CDS gi|543388354|gb|AVFF01000011.1| 45800 44916 -2 - 885 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1943 CDS gi|543388354|gb|AVFF01000011.1| 47757 46051 -3 - 1707 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1944 CDS gi|543388354|gb|AVFF01000011.1| 48931 48038 -1 - 894 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1945 CDS gi|543388354|gb|AVFF01000011.1| 49155 49003 -3 - 153 hypothetical protein - none -
fig|6666666.67480.peg.1946 CDS gi|543388354|gb|AVFF01000011.1| 50464 49172 -1 - 1293 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.67480.peg.1947 CDS gi|543388354|gb|AVFF01000011.1| 51113 50730 -2 - 384 Glutaredoxin-like domain protein - none -
fig|6666666.67480.peg.1948 CDS gi|543388354|gb|AVFF01000011.1| 51443 52519 2 + 1077 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67480.peg.1949 CDS gi|543388354|gb|AVFF01000011.1| 53110 52952 -1 - 159 hypothetical protein - none -
fig|6666666.67480.peg.1950 CDS gi|543388354|gb|AVFF01000011.1| 53396 54370 2 + 975 Partial REP13E12 repeat protein - none -
fig|6666666.67480.peg.1951 CDS gi|543388354|gb|AVFF01000011.1| 54642 54526 -3 - 117 hypothetical protein - none -
fig|6666666.67480.peg.1952 CDS gi|543388354|gb|AVFF01000011.1| 55070 54879 -2 - 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67480.peg.1953 CDS gi|543388354|gb|AVFF01000011.1| 56254 55424 -1 - 831 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67480.peg.1954 CDS gi|543388354|gb|AVFF01000011.1| 57853 56396 -1 - 1458 Putative membrane protein - none -
fig|6666666.67480.peg.1955 CDS gi|543388354|gb|AVFF01000011.1| 58710 57865 -3 - 846 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67480.peg.1956 CDS gi|543388354|gb|AVFF01000011.1| 58828 59730 1 + 903 FIG00543972: hypothetical protein - none -
fig|6666666.67480.peg.1957 CDS gi|543388354|gb|AVFF01000011.1| 59986 59762 -1 - 225 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67480.peg.1958 CDS gi|543388354|gb|AVFF01000011.1| 60459 59977 -3 - 483 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67480.peg.1959 CDS gi|543388354|gb|AVFF01000011.1| 61901 60570 -2 - 1332 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67480.peg.1960 CDS gi|543388489|gb|AVFF01000010.1| 26 1531 2 + 1506 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.67480.peg.1961 CDS gi|543388489|gb|AVFF01000010.1| 1501 1635 1 + 135 hypothetical protein - none -
fig|6666666.67480.peg.1962 CDS gi|543388489|gb|AVFF01000010.1| 1640 4999 2 + 3360 Type II restriction enzyme, methylase subunits - none -
fig|6666666.67480.peg.1963 CDS gi|543388489|gb|AVFF01000010.1| 4996 6213 1 + 1218 Type II restriction enzyme, methylase subunits - none -
fig|6666666.67480.peg.1964 CDS gi|543388489|gb|AVFF01000010.1| 6232 12747 1 + 6516 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.67480.peg.1965 CDS gi|543388489|gb|AVFF01000010.1| 12744 15191 3 + 2448 putative DNA helicase - none -
fig|6666666.67480.peg.1966 CDS gi|543388489|gb|AVFF01000010.1| 15964 15287 -1 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.1967 CDS gi|543388489|gb|AVFF01000010.1| 17022 15964 -3 - 1059 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.1968 CDS gi|543388489|gb|AVFF01000010.1| 17409 17053 -3 - 357 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.1969 CDS gi|543388489|gb|AVFF01000010.1| 17884 17402 -1 - 483 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.1970 CDS gi|543388489|gb|AVFF01000010.1| 18134 18436 2 + 303 hypothetical protein - none -
fig|6666666.67480.peg.1971 CDS gi|543388489|gb|AVFF01000010.1| 20024 18942 -2 - 1083 putative ammonia monooxygenase - none -
fig|6666666.67480.peg.1972 CDS gi|543388489|gb|AVFF01000010.1| 20088 20819 3 + 732 Short chain dehydrogenase - none -
fig|6666666.67480.peg.1973 CDS gi|543388489|gb|AVFF01000010.1| 20869 21189 1 + 321 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67480.peg.1974 CDS gi|543388489|gb|AVFF01000010.1| 21189 22019 3 + 831 lactoylglutathione lyase-like protein - none -
fig|6666666.67480.peg.1975 CDS gi|543388489|gb|AVFF01000010.1| 23608 22244 -1 - 1365 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67480.peg.1976 CDS gi|543388489|gb|AVFF01000010.1| 24400 23735 -1 - 666 Uncharacterized protein conserved in bacteria - none -
fig|6666666.67480.peg.1977 CDS gi|543388489|gb|AVFF01000010.1| 24639 24758 3 + 120 hypothetical protein - none -
fig|6666666.67480.peg.1978 CDS gi|543388489|gb|AVFF01000010.1| 26392 24755 -1 - 1638 hypothetical protein - none -
fig|6666666.67480.peg.1979 CDS gi|543388489|gb|AVFF01000010.1| 26526 26663 3 + 138 hypothetical protein - none -
fig|6666666.67480.peg.1980 CDS gi|543388489|gb|AVFF01000010.1| 26949 28262 3 + 1314 C4-dicarboxylate transporter DcuA - none -
fig|6666666.67480.peg.1981 CDS gi|543388489|gb|AVFF01000010.1| 30156 28279 -3 - 1878 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67480.peg.1982 CDS gi|543388489|gb|AVFF01000010.1| 31597 30296 -1 - 1302 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67480.peg.1983 CDS gi|543388489|gb|AVFF01000010.1| 32618 31590 -2 - 1029 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.67480.peg.1984 CDS gi|543388489|gb|AVFF01000010.1| 32835 32602 -3 - 234 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.67480.peg.1985 CDS gi|543388489|gb|AVFF01000010.1| 33182 32850 -2 - 333 FIG00547530: hypothetical protein - none -
fig|6666666.67480.peg.1986 CDS gi|543388489|gb|AVFF01000010.1| 34856 33201 -2 - 1656 Predicted sodium-dependent galactose transporter - none -
fig|6666666.67480.peg.1987 CDS gi|543388489|gb|AVFF01000010.1| 36026 35025 -2 - 1002 aldose 1-epimerase( EC:5.1.3.3 ) - none -
fig|6666666.67480.peg.1988 CDS gi|543388489|gb|AVFF01000010.1| 36202 37806 1 + 1605 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.67480.peg.1989 CDS gi|543388489|gb|AVFF01000010.1| 39595 37823 -1 - 1773 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67480.peg.1990 CDS gi|543388489|gb|AVFF01000010.1| 39846 42005 3 + 2160 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67480.peg.1991 CDS gi|543388489|gb|AVFF01000010.1| 42015 42962 3 + 948 secretory serine protease - none -
fig|6666666.67480.peg.1992 CDS gi|543388489|gb|AVFF01000010.1| 43123 43884 1 + 762 secretory serine protease - none -
fig|6666666.67480.peg.1993 CDS gi|543388489|gb|AVFF01000010.1| 43967 45565 2 + 1599 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67480.peg.1994 CDS gi|543388489|gb|AVFF01000010.1| 46303 45566 -1 - 738 Putative membrane protein - none -
fig|6666666.67480.peg.1995 CDS gi|543388489|gb|AVFF01000010.1| 47123 46422 -2 - 702 hypothetical protein - none -
fig|6666666.67480.peg.1996 CDS gi|543388489|gb|AVFF01000010.1| 47152 49137 1 + 1986 putative endopeptidase - none -
fig|6666666.67480.peg.1997 CDS gi|543388489|gb|AVFF01000010.1| 49797 49183 -3 - 615 No significant database matches - none -
fig|6666666.67480.peg.1998 CDS gi|543388489|gb|AVFF01000010.1| 49915 50820 1 + 906 hypothetical protein - none -
fig|6666666.67480.peg.1999 CDS gi|543388489|gb|AVFF01000010.1| 50820 51713 3 + 894 putative glycosyltransferase - none -
fig|6666666.67480.peg.2000 CDS gi|543388489|gb|AVFF01000010.1| 51726 53057 3 + 1332 hypothetical protein - none -
fig|6666666.67480.peg.2001 CDS gi|543388489|gb|AVFF01000010.1| 53074 53766 1 + 693 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67480.peg.2002 CDS gi|543388489|gb|AVFF01000010.1| 53767 54174 1 + 408 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67480.peg.2003 CDS gi|543388489|gb|AVFF01000010.1| 54576 54235 -3 - 342 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.67480.peg.2004 CDS gi|543388489|gb|AVFF01000010.1| 55166 54600 -2 - 567 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.67480.peg.2005 CDS gi|543388489|gb|AVFF01000010.1| 56099 55191 -2 - 909 putative membrane protein - none -
fig|6666666.67480.peg.2006 CDS gi|543388489|gb|AVFF01000010.1| 57154 56051 -1 - 1104 putative membrane protein - none -
fig|6666666.67480.peg.2007 CDS gi|543388489|gb|AVFF01000010.1| 60554 57219 -2 - 3336 putative arabinosyltransferase - none -
fig|6666666.67480.peg.2008 CDS gi|543388489|gb|AVFF01000010.1| 62542 60629 -1 - 1914 putative membrane protein - none -
fig|6666666.67480.peg.2009 CDS gi|543388489|gb|AVFF01000010.1| 63334 62573 -1 - 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67480.peg.2010 CDS gi|543388489|gb|AVFF01000010.1| 64225 63401 -1 - 825 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67480.peg.2011 CDS gi|543388910|gb|AVFF01000002.1| 4476 1021 -3 - 3456 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.67480.peg.2012 CDS gi|543388910|gb|AVFF01000002.1| 4432 4572 1 + 141 hypothetical protein - none -
fig|6666666.67480.peg.2013 CDS gi|543388910|gb|AVFF01000002.1| 4911 6773 3 + 1863 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67480.peg.2014 CDS gi|543388910|gb|AVFF01000002.1| 6774 7496 3 + 723 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67480.peg.2015 CDS gi|543388910|gb|AVFF01000002.1| 7522 8712 1 + 1191 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67480.peg.2016 CDS gi|543388910|gb|AVFF01000002.1| 8743 9204 1 + 462 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67480.peg.2017 CDS gi|543388910|gb|AVFF01000002.1| 9433 9311 -1 - 123 hypothetical protein - none -
fig|6666666.67480.peg.2018 CDS gi|543388910|gb|AVFF01000002.1| 9438 10952 3 + 1515 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.2019 CDS gi|543388910|gb|AVFF01000002.1| 12253 10949 -1 - 1305 hypothetical protein - none -
fig|6666666.67480.peg.2020 CDS gi|543388910|gb|AVFF01000002.1| 12576 12256 -3 - 321 hypothetical protein - none -
fig|6666666.67480.peg.2021 CDS gi|543388910|gb|AVFF01000002.1| 12689 13516 2 + 828 FIG00545709: hypothetical protein - none -
fig|6666666.67480.peg.2022 CDS gi|543388910|gb|AVFF01000002.1| 13891 13541 -1 - 351 ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.2023 CDS gi|543388910|gb|AVFF01000002.1| 14072 14203 2 + 132 hypothetical protein - none -
fig|6666666.67480.peg.2024 CDS gi|543388910|gb|AVFF01000002.1| 15597 14200 -3 - 1398 flavohemoprotein - none -
fig|6666666.67480.peg.2025 CDS gi|543388910|gb|AVFF01000002.1| 15750 17147 3 + 1398 FIG00545970: hypothetical protein - none -
fig|6666666.67480.peg.2026 CDS gi|543388910|gb|AVFF01000002.1| 17311 19869 1 + 2559 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67480.peg.2027 CDS gi|543388910|gb|AVFF01000002.1| 19927 20757 1 + 831 Rhodanese-related sulfurtransferase - none -
fig|6666666.67480.peg.2028 CDS gi|543388910|gb|AVFF01000002.1| 20767 22518 1 + 1752 FIG00544840: hypothetical protein - none -
fig|6666666.67480.peg.2029 CDS gi|543388910|gb|AVFF01000002.1| 22536 23093 3 + 558 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.2030 CDS gi|543388910|gb|AVFF01000002.1| 23093 23794 2 + 702 probable RNA methyltransferase - none -
fig|6666666.67480.peg.2031 CDS gi|543388910|gb|AVFF01000002.1| 23906 25111 2 + 1206 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67480.peg.2032 CDS gi|543388910|gb|AVFF01000002.1| 25170 26204 3 + 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67480.peg.2033 CDS gi|543388910|gb|AVFF01000002.1| 26247 27476 3 + 1230 FIG00545517: hypothetical protein - none -
fig|6666666.67480.peg.2034 CDS gi|543388910|gb|AVFF01000002.1| 28485 27517 -3 - 969 FIG00545467: hypothetical protein - none -
fig|6666666.67480.peg.2035 CDS gi|543388910|gb|AVFF01000002.1| 28593 29885 3 + 1293 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67480.peg.2036 CDS gi|543388910|gb|AVFF01000002.1| 29892 31394 3 + 1503 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67480.peg.2037 CDS gi|543388910|gb|AVFF01000002.1| 33862 31391 -1 - 2472 serine/threonine protein kinase - none -
fig|6666666.67480.peg.2038 CDS gi|543388910|gb|AVFF01000002.1| 34000 33863 -1 - 138 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67480.peg.2039 CDS gi|543388910|gb|AVFF01000002.1| 34968 34000 -3 - 969 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67480.peg.2040 CDS gi|543388910|gb|AVFF01000002.1| 36434 34965 -2 - 1470 FIG00543876: hypothetical protein - none -
fig|6666666.67480.peg.2041 CDS gi|543388910|gb|AVFF01000002.1| 36542 37051 2 + 510 mutT3 - none -
fig|6666666.67480.peg.2042 CDS gi|543388910|gb|AVFF01000002.1| 38675 37155 -2 - 1521 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.2043 CDS gi|543388910|gb|AVFF01000002.1| 38999 38679 -2 - 321 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67480.peg.2044 CDS gi|543388910|gb|AVFF01000002.1| 39504 39004 -3 - 501 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67480.peg.2045 CDS gi|543388910|gb|AVFF01000002.1| 40610 39540 -2 - 1071 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67480.peg.2046 CDS gi|543388910|gb|AVFF01000002.1| 41231 40620 -2 - 612 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67480.peg.2047 CDS gi|543388910|gb|AVFF01000002.1| 41254 41523 1 + 270 hypothetical protein - none -
fig|6666666.67480.peg.2048 CDS gi|543388910|gb|AVFF01000002.1| 41525 42364 2 + 840 hypothetical protein - none -
fig|6666666.67480.peg.2049 CDS gi|543388910|gb|AVFF01000002.1| 42364 43614 1 + 1251 Putative cytoplasmic protein - none -
fig|6666666.67480.peg.2050 CDS gi|543388910|gb|AVFF01000002.1| 44021 43623 -2 - 399 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67480.peg.2051 CDS gi|543388910|gb|AVFF01000002.1| 44299 44024 -1 - 276 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67480.peg.2052 CDS gi|543388910|gb|AVFF01000002.1| 44878 44303 -1 - 576 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67480.peg.2053 CDS gi|543388910|gb|AVFF01000002.1| 46614 44878 -3 - 1737 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67480.peg.2054 CDS gi|543388910|gb|AVFF01000002.1| 47155 46649 -1 - 507 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67480.peg.2055 CDS gi|543388910|gb|AVFF01000002.1| 50079 47155 -3 - 2925 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67480.peg.2056 CDS gi|543388910|gb|AVFF01000002.1| 51663 50266 -3 - 1398 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67480.peg.2057 CDS gi|543388910|gb|AVFF01000002.1| 53179 51689 -1 - 1491 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67480.peg.2058 CDS gi|543388910|gb|AVFF01000002.1| 53536 55182 1 + 1647 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67480.peg.2059 CDS gi|543388910|gb|AVFF01000002.1| 55788 55988 3 + 201 hypothetical protein - none -
fig|6666666.67480.peg.2060 CDS gi|543388910|gb|AVFF01000002.1| 56070 56192 3 + 123 hypothetical protein - none -
fig|6666666.67480.peg.2061 CDS gi|543388910|gb|AVFF01000002.1| 56439 57338 3 + 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67480.peg.2062 CDS gi|543388910|gb|AVFF01000002.1| 57696 57370 -3 - 327 rhodanese-related sulfurtransferase - none -
fig|6666666.67480.peg.2063 CDS gi|543388910|gb|AVFF01000002.1| 58785 57973 -3 - 813 FIG00545550: hypothetical protein - none -
fig|6666666.67480.peg.2064 CDS gi|543388910|gb|AVFF01000002.1| 59474 58998 -2 - 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67480.peg.2065 CDS gi|543388910|gb|AVFF01000002.1| 59649 60986 3 + 1338 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.2066 CDS gi|543388910|gb|AVFF01000002.1| 60999 62177 3 + 1179 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67480.peg.2067 CDS gi|543388910|gb|AVFF01000002.1| 62262 62873 3 + 612 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67480.peg.2068 CDS gi|543388910|gb|AVFF01000002.1| 62923 65262 1 + 2340 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67480.peg.2069 CDS gi|543389014|gb|AVFF01000001.1| 813 1100 3 + 288 Transcriptional regulator in glycyl-tRNA synthetase containing cluster Glycyl-tRNA synthetase containing cluster
fig|6666666.67480.peg.2070 CDS gi|543389014|gb|AVFF01000001.1| 1114 1551 1 + 438 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.67480.peg.2071 CDS gi|543389014|gb|AVFF01000001.1| 2957 1662 -2 - 1296 FIG00544679: hypothetical protein - none -
fig|6666666.67480.peg.2072 CDS gi|543389014|gb|AVFF01000001.1| 3745 3008 -1 - 738 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67480.peg.2073 CDS gi|543389014|gb|AVFF01000001.1| 4530 3790 -3 - 741 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67480.peg.2074 CDS gi|543389014|gb|AVFF01000001.1| 5460 4534 -3 - 927 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67480.peg.2075 CDS gi|543389014|gb|AVFF01000001.1| 6345 5464 -3 - 882 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67480.peg.2076 CDS gi|543389014|gb|AVFF01000001.1| 7095 6430 -3 - 666 FIG000233: metal-dependent hydrolase - none -
fig|6666666.67480.peg.2077 CDS gi|543389014|gb|AVFF01000001.1| 8145 7186 -3 - 960 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67480.peg.2078 CDS gi|543389014|gb|AVFF01000001.1| 8970 8230 -3 - 741 FIG111991: hypothetical protein CBSS-313593.3.peg.2729
fig|6666666.67480.peg.2079 CDS gi|543389014|gb|AVFF01000001.1| 9532 8951 -1 - 582 RNA polymerase sigma-70 factor CBSS-313593.3.peg.2729;
Transcription initiation, bacterial sigma factors
fig|6666666.67480.peg.2080 CDS gi|543389014|gb|AVFF01000001.1| 9681 9544 -3 - 138 hypothetical protein - none -
fig|6666666.67480.peg.2081 CDS gi|543389014|gb|AVFF01000001.1| 9889 9656 -1 - 234 hypothetical protein - none -
fig|6666666.67480.peg.2082 CDS gi|543389014|gb|AVFF01000001.1| 10130 11746 2 + 1617 DipZ protein - none -
fig|6666666.67480.peg.2083 CDS gi|543389014|gb|AVFF01000001.1| 12584 11844 -2 - 741 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67480.peg.2084 CDS gi|543389014|gb|AVFF01000001.1| 13760 12615 -2 - 1146 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67480.peg.2085 CDS gi|543389014|gb|AVFF01000001.1| 14937 13906 -3 - 1032 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67480.peg.2086 CDS gi|543389014|gb|AVFF01000001.1| 16124 14937 -2 - 1188 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.67480.peg.2087 CDS gi|543389014|gb|AVFF01000001.1| 16364 17824 2 + 1461 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67480.peg.2088 CDS gi|543389014|gb|AVFF01000001.1| 17828 18868 2 + 1041 Uncharacterized protein Rv1841c/MT1889 - none -
fig|6666666.67480.peg.2089 CDS gi|543389014|gb|AVFF01000001.1| 19574 18891 -2 - 684 FIG00543880: hypothetical protein - none -
fig|6666666.67480.peg.2090 CDS gi|543389014|gb|AVFF01000001.1| 21724 19895 -1 - 1830 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.2091 CDS gi|543389014|gb|AVFF01000001.1| 22256 22002 -2 - 255 hypothetical protein - none -
fig|6666666.67480.peg.2092 CDS gi|543389014|gb|AVFF01000001.1| 22665 22799 3 + 135 hypothetical protein - none -
fig|6666666.67480.peg.2093 CDS gi|543389014|gb|AVFF01000001.1| 22937 23107 2 + 171 transposase for insertion sequence - none -
fig|6666666.67480.peg.2094 CDS gi|543389014|gb|AVFF01000001.1| 23225 23458 2 + 234 Mobile element protein - none -
fig|6666666.67480.peg.2095 CDS gi|543389014|gb|AVFF01000001.1| 23761 23946 1 + 186 Mobile element protein - none -
fig|6666666.67480.peg.2096 CDS gi|543389014|gb|AVFF01000001.1| 24711 24866 3 + 156 hypothetical protein - none -
fig|6666666.67480.peg.2097 CDS gi|543389014|gb|AVFF01000001.1| 25847 27505 2 + 1659 hypothetical protein - none -
fig|6666666.67480.peg.2098 CDS gi|543389014|gb|AVFF01000001.1| 28124 28276 2 + 153 hypothetical protein - none -
fig|6666666.67480.peg.2099 CDS gi|543389014|gb|AVFF01000001.1| 28280 28702 2 + 423 carboxylesterase type B - none -
fig|6666666.67480.peg.2100 CDS gi|543389014|gb|AVFF01000001.1| 29024 29611 2 + 588 hypothetical protein - none -
fig|6666666.67480.peg.2101 CDS gi|543389014|gb|AVFF01000001.1| 30264 29701 -3 - 564 hypothetical protein - none -
fig|6666666.67480.peg.2102 CDS gi|543389014|gb|AVFF01000001.1| 30497 31072 2 + 576 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.2103 CDS gi|543389014|gb|AVFF01000001.1| 31044 32381 3 + 1338 putative ABC transporter ATP-binding protein - none -
fig|6666666.67480.peg.2104 CDS gi|543389014|gb|AVFF01000001.1| 32438 33634 2 + 1197 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.67480.peg.2105 CDS gi|543389014|gb|AVFF01000001.1| 33741 35144 3 + 1404 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67480.peg.2106 CDS gi|543389014|gb|AVFF01000001.1| 35220 36272 3 + 1053 FIG00546389: hypothetical protein - none -
fig|6666666.67480.peg.2107 CDS gi|543389014|gb|AVFF01000001.1| 36303 37835 3 + 1533 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.67480.peg.2108 CDS gi|543389014|gb|AVFF01000001.1| 37832 38794 2 + 963 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67480.peg.2109 CDS gi|543389014|gb|AVFF01000001.1| 38791 39627 1 + 837 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67480.peg.2110 CDS gi|543389014|gb|AVFF01000001.1| 39624 41153 3 + 1530 Putative glutathione transporter, ATP-binding component - none -
fig|6666666.67480.peg.2111 CDS gi|543389014|gb|AVFF01000001.1| 42507 41191 -3 - 1317 Proline iminopeptidase (EC 3.4.11.5) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67480.peg.2112 CDS gi|543389014|gb|AVFF01000001.1| 44404 42779 -1 - 1626 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67480.peg.2113 CDS gi|543389014|gb|AVFF01000001.1| 45459 44464 -3 - 996 sodium-dependent transporter - none -
fig|6666666.67480.peg.2114 CDS gi|543389014|gb|AVFF01000001.1| 46194 45646 -3 - 549 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67480.peg.2115 CDS gi|543389014|gb|AVFF01000001.1| 47596 46271 -1 - 1326 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67480.peg.2116 CDS gi|543389014|gb|AVFF01000001.1| 48180 47665 -3 - 516 hypothetical membrane protein - none -
fig|6666666.67480.peg.2117 CDS gi|543389014|gb|AVFF01000001.1| 48929 48180 -2 - 750 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67480.peg.2118 CDS gi|543389014|gb|AVFF01000001.1| 48962 50086 2 + 1125 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67480.peg.2119 CDS gi|543389014|gb|AVFF01000001.1| 50248 51582 1 + 1335 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis
fig|6666666.67480.peg.2120 CDS gi|543389014|gb|AVFF01000001.1| 51584 52642 2 + 1059 Maltose/maltodextrin ABC transporter, permease protein MalF - none -
fig|6666666.67480.peg.2121 CDS gi|543389014|gb|AVFF01000001.1| 52705 53514 1 + 810 Maltose/maltodextrin ABC transporter, permease protein MalG - none -
fig|6666666.67480.peg.2122 CDS gi|543389014|gb|AVFF01000001.1| 53705 53511 -2 - 195 hypothetical protein - none -
fig|6666666.67480.peg.2123 CDS gi|543389014|gb|AVFF01000001.1| 53840 54634 2 + 795 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.67480.peg.2124 CDS gi|543389014|gb|AVFF01000001.1| 54820 55458 1 + 639 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.67480.peg.2125 CDS gi|543389014|gb|AVFF01000001.1| 55512 55730 3 + 219 hypothetical protein - none -
fig|6666666.67480.peg.2126 CDS gi|543389014|gb|AVFF01000001.1| 55783 57465 1 + 1683 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67480.peg.2127 CDS gi|543389014|gb|AVFF01000001.1| 57422 57625 2 + 204 hypothetical protein - none -
fig|6666666.67480.peg.2128 CDS gi|543389014|gb|AVFF01000001.1| 57750 58256 3 + 507 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67480.peg.2129 CDS gi|543389014|gb|AVFF01000001.1| 58431 58799 3 + 369 FIG00547406: hypothetical protein - none -
fig|6666666.67480.peg.2130 CDS gi|543389014|gb|AVFF01000001.1| 60034 58817 -1 - 1218 FIG00548218: hypothetical protein - none -
fig|6666666.67480.peg.2131 CDS gi|543389014|gb|AVFF01000001.1| 60092 60982 2 + 891 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67480.peg.2132 CDS gi|543389014|gb|AVFF01000001.1| 61164 62942 3 + 1779 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67480.peg.2133 CDS gi|543389014|gb|AVFF01000001.1| 63001 63501 1 + 501 Putative acetyltransferase - none -
fig|6666666.67480.peg.2134 CDS gi|543389014|gb|AVFF01000001.1| 63902 64852 2 + 951 periplasmic binding protein - none -
fig|6666666.67480.peg.2135 CDS gi|543389014|gb|AVFF01000001.1| 68312 64884 -2 - 3429 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67480.peg.2136 CDS gi|543389014|gb|AVFF01000001.1| 69905 68478 -2 - 1428 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) TCA Cycle
fig|6666666.67480.peg.2137 CDS gi|543389014|gb|AVFF01000001.1| 71277 70087 -3 - 1191 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67480.peg.2138 CDS gi|543389014|gb|AVFF01000001.1| 71846 71385 -2 - 462 predicted transcriptional regulator - none -
fig|6666666.67480.peg.2139 CDS gi|543389014|gb|AVFF01000001.1| 72769 72065 -1 - 705 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.67480.peg.2140 CDS gi|543389014|gb|AVFF01000001.1| 72790 73161 1 + 372 hypothetical protein - none -
fig|6666666.67480.peg.2141 CDS gi|543389014|gb|AVFF01000001.1| 73174 74190 1 + 1017 hypothetical protein - none -
fig|6666666.67480.peg.2142 CDS gi|543389014|gb|AVFF01000001.1| 74324 75574 2 + 1251 FIG026501: hypothetical protein - none -
fig|6666666.67480.peg.2143 CDS gi|543389014|gb|AVFF01000001.1| 76635 75571 -3 - 1065 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.67480.peg.2144 CDS gi|543389014|gb|AVFF01000001.1| 76790 78193 2 + 1404 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67480.peg.2145 CDS gi|543389014|gb|AVFF01000001.1| 79350 78262 -3 - 1089 putative membrane protein - none -
fig|6666666.67480.peg.2146 CDS gi|543389014|gb|AVFF01000001.1| 80548 79517 -1 - 1032 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67480.peg.2147 CDS gi|543389014|gb|AVFF01000001.1| 80847 80656 -3 - 192 hypothetical protein - none -
fig|6666666.67480.peg.2148 CDS gi|543389014|gb|AVFF01000001.1| 81682 80903 -1 - 780 putative membrane protein - none -
fig|6666666.67480.peg.2149 CDS gi|543389014|gb|AVFF01000001.1| 82702 81758 -1 - 945 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67480.peg.2150 CDS gi|543389014|gb|AVFF01000001.1| 82975 82742 -1 - 234 putative transport protein - none -
fig|6666666.67480.peg.2151 CDS gi|543389014|gb|AVFF01000001.1| 84002 82959 -2 - 1044 putative transport protein - none -
fig|6666666.67480.peg.2152 CDS gi|543389014|gb|AVFF01000001.1| 84204 86420 3 + 2217 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) TCA Cycle
fig|6666666.67480.peg.2153 CDS gi|543389014|gb|AVFF01000001.1| 88088 86736 -2 - 1353 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67480.peg.2154 CDS gi|543389014|gb|AVFF01000001.1| 88331 89449 2 + 1119 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67480.peg.2155 CDS gi|543389014|gb|AVFF01000001.1| 89689 92091 1 + 2403 Integral membrane protein - none -
fig|6666666.67480.peg.2156 CDS gi|543389014|gb|AVFF01000001.1| 92084 92791 2 + 708 Transcriptional regulator, TetR family - none -
fig|6666666.67480.peg.2157 CDS gi|543389014|gb|AVFF01000001.1| 92932 93486 1 + 555 hypothetical protein - none -
fig|6666666.67480.peg.2158 CDS gi|543389014|gb|AVFF01000001.1| 93866 94033 2 + 168 hypothetical protein - none -
fig|6666666.67480.peg.2159 CDS gi|543389014|gb|AVFF01000001.1| 94063 94584 1 + 522 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67480.peg.2160 CDS gi|543389014|gb|AVFF01000001.1| 95962 94571 -1 - 1392 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.67480.peg.2161 CDS gi|543389014|gb|AVFF01000001.1| 96428 96012 -2 - 417 hypothetical protein - none -
fig|6666666.67480.peg.2162 CDS gi|543389014|gb|AVFF01000001.1| 97278 96418 -3 - 861 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.67480.peg.2163 CDS gi|543389014|gb|AVFF01000001.1| 97293 97763 3 + 471 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67480.peg.2164 CDS gi|543389014|gb|AVFF01000001.1| 99340 97760 -1 - 1581 membrane-flanked domain Folate biosynthesis cluster
fig|6666666.67480.peg.2165 CDS gi|543389014|gb|AVFF01000001.1| 99507 99337 -3 - 171 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.67480.peg.2166 CDS gi|543389014|gb|AVFF01000001.1| 99544 99675 1 + 132 hypothetical protein - none -
fig|6666666.67480.peg.2167 CDS gi|543389014|gb|AVFF01000001.1| 100288 99869 -1 - 420 hypothetical protein - none -
fig|6666666.67480.peg.2168 CDS gi|543389014|gb|AVFF01000001.1| 100684 100568 -1 - 117 hypothetical protein - none -
fig|6666666.67480.peg.2169 CDS gi|543389014|gb|AVFF01000001.1| 102529 101921 -1 - 609 thiamine biosynthesis protein x - none -
fig|6666666.67480.peg.2170 CDS gi|543389014|gb|AVFF01000001.1| 102955 103143 1 + 189 hypothetical protein - none -
fig|6666666.67480.peg.2171 CDS gi|543389014|gb|AVFF01000001.1| 104166 103156 -3 - 1011 Putative stomatin/prohibitin-family membrane protease subunit aq_911 - none -
fig|6666666.67480.peg.2172 CDS gi|543389014|gb|AVFF01000001.1| 105005 104217 -2 - 789 hypothetical protein - none -
fig|6666666.67480.peg.2173 CDS gi|543389014|gb|AVFF01000001.1| 107558 105021 -2 - 2538 Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent Flavohaemoglobin;
Nitrosative stress
fig|6666666.67480.peg.2174 CDS gi|543389014|gb|AVFF01000001.1| 107778 108041 3 + 264 hypothetical protein - none -
fig|6666666.67480.peg.2175 CDS gi|543389014|gb|AVFF01000001.1| 108111 108863 3 + 753 NAD-dependent protein deacetylase of SIR2 family Redox-dependent regulation of nucleus processes
fig|6666666.67480.peg.2176 CDS gi|543389014|gb|AVFF01000001.1| 108974 109774 2 + 801 hypothetical protein - none -
fig|6666666.67480.peg.2177 CDS gi|543389014|gb|AVFF01000001.1| 109964 111268 2 + 1305 Sporulation protein and related proteins - none -
fig|6666666.67480.peg.2178 CDS gi|543389014|gb|AVFF01000001.1| 111635 112525 2 + 891 hypothetical protein - none -
fig|6666666.67480.peg.2179 CDS gi|543389014|gb|AVFF01000001.1| 112984 112577 -1 - 408 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) - none -
fig|6666666.67480.peg.2180 CDS gi|543389014|gb|AVFF01000001.1| 113249 113398 2 + 150 hypothetical protein - none -
fig|6666666.67480.peg.2181 CDS gi|543389014|gb|AVFF01000001.1| 113516 113647 2 + 132 hypothetical protein - none -
fig|6666666.67480.peg.2182 CDS gi|543389014|gb|AVFF01000001.1| 113899 113708 -1 - 192 hypothetical protein - none -
fig|6666666.67480.peg.2183 CDS gi|543389014|gb|AVFF01000001.1| 115200 114085 -3 - 1116 conserved hypothetical phage AbiD protein - none -
fig|6666666.67480.peg.2184 CDS gi|543389014|gb|AVFF01000001.1| 115189 115587 1 + 399 Phage antirepressor protein - none -
fig|6666666.67480.peg.2185 CDS gi|543389014|gb|AVFF01000001.1| 115584 115772 3 + 189 FIG00520233: hypothetical protein - none -
fig|6666666.67480.peg.2186 CDS gi|543389014|gb|AVFF01000001.1| 115879 116121 1 + 243 DNA primase/helicase, phage-associated Phage replication
fig|6666666.67480.peg.2187 CDS gi|543389014|gb|AVFF01000001.1| 119808 116530 -3 - 3279 hypothetical protein - none -
fig|6666666.67480.peg.2188 CDS gi|543389014|gb|AVFF01000001.1| 121709 120066 -2 - 1644 hypothetical protein - none -
fig|6666666.67480.peg.2189 CDS gi|543389014|gb|AVFF01000001.1| 123363 121738 -3 - 1626 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster;
Fatty acid metabolism cluster
fig|6666666.67480.peg.2190 CDS gi|543389014|gb|AVFF01000001.1| 124466 123405 -2 - 1062 FIG00547296: hypothetical protein - none -
fig|6666666.67480.peg.2191 CDS gi|543389014|gb|AVFF01000001.1| 125784 124582 -3 - 1203 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67480.peg.2192 CDS gi|543389014|gb|AVFF01000001.1| 125942 126553 2 + 612 Transporter - none -
fig|6666666.67480.peg.2193 CDS gi|543389014|gb|AVFF01000001.1| 127000 128601 1 + 1602 COG0028: Thiamine pyrophosphate-requiring enzymes - none -
fig|6666666.67480.peg.2194 CDS gi|543389014|gb|AVFF01000001.1| 128738 130078 2 + 1341 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67480.peg.2195 CDS gi|543389014|gb|AVFF01000001.1| 130113 131159 3 + 1047 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67480.peg.2196 CDS gi|543389014|gb|AVFF01000001.1| 131742 131317 -3 - 426 L-fucose mutarotase - none -
fig|6666666.67480.peg.2197 CDS gi|543389014|gb|AVFF01000001.1| 132941 131745 -2 - 1197 Fucose permease - none -
fig|6666666.67480.peg.2198 CDS gi|543389014|gb|AVFF01000001.1| 133128 132955 -3 - 174 hypothetical protein - none -
fig|6666666.67480.peg.2199 CDS gi|543389014|gb|AVFF01000001.1| 133608 133195 -3 - 414 L-fuconate dehydratase (EC 4.2.1.68) Muconate lactonizing enzyme family
fig|6666666.67480.peg.2200 CDS gi|543389014|gb|AVFF01000001.1| 134408 133590 -2 - 819 L-fuconate dehydratase (EC 4.2.1.68) Muconate lactonizing enzyme family
fig|6666666.67480.peg.2201 CDS gi|543389014|gb|AVFF01000001.1| 134737 135510 1 + 774 Transcriptional regulator, IclR family - none -
fig|6666666.67480.peg.2202 CDS gi|543389014|gb|AVFF01000001.1| 135616 136401 1 + 786 dehydrogenase clustered with L-fuconate utilization genes - none -
fig|6666666.67480.peg.2203 CDS gi|543389014|gb|AVFF01000001.1| 136446 137261 3 + 816 L-fuconolactone hydrolase - none -
fig|6666666.67480.peg.2204 CDS gi|543389014|gb|AVFF01000001.1| 137262 138146 3 + 885 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67480.peg.2205 CDS gi|543389014|gb|AVFF01000001.1| 138194 138775 2 + 582 Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) - none -
fig|6666666.67480.peg.2206 CDS gi|543389014|gb|AVFF01000001.1| 138789 139631 3 + 843 Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) - none -
fig|6666666.67480.peg.2207 CDS gi|543389014|gb|AVFF01000001.1| 139676 140710 2 + 1035 Ferrienterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) - none -
fig|6666666.67480.peg.2208 CDS gi|543389014|gb|AVFF01000001.1| 144036 140788 -3 - 3249 DNA polymerase III alpha subunit (EC 2.7.7.7) Phage replication
fig|6666666.67480.peg.2209 CDS gi|543389014|gb|AVFF01000001.1| 144239 145144 2 + 906 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.2210 CDS gi|543389014|gb|AVFF01000001.1| 145267 146343 1 + 1077 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.2211 CDS gi|543389014|gb|AVFF01000001.1| 146340 147014 3 + 675 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67480.peg.2212 CDS gi|543389014|gb|AVFF01000001.1| 148222 147134 -1 - 1089 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67480.peg.2213 CDS gi|543389014|gb|AVFF01000001.1| 148530 148673 3 + 144 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.67480.peg.2214 CDS gi|543389014|gb|AVFF01000001.1| 148701 149765 3 + 1065 monooxygenase, putative - none -
fig|6666666.67480.peg.2215 CDS gi|543389014|gb|AVFF01000001.1| 150745 149780 -1 - 966 FIG00546271: hypothetical protein - none -
fig|6666666.67480.peg.2216 CDS gi|543389014|gb|AVFF01000001.1| 150913 151590 1 + 678 No significant database matches - none -
fig|6666666.67480.peg.2217 CDS gi|543389014|gb|AVFF01000001.1| 153251 151587 -2 - 1665 DNA polymerase IV-like protein ImuB DNA repair, bacterial;
DNA replication strays
fig|6666666.67480.peg.2218 CDS gi|543389014|gb|AVFF01000001.1| 153998 153252 -2 - 747 hypothetical protein - none -
fig|6666666.67480.peg.2219 CDS gi|543389014|gb|AVFF01000001.1| 156279 154705 -3 - 1575 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.67480.peg.2220 CDS gi|543389014|gb|AVFF01000001.1| 156415 157359 1 + 945 FIG00547072: hypothetical protein - none -
fig|6666666.67480.peg.2221 CDS gi|543389014|gb|AVFF01000001.1| 158537 157377 -2 - 1161 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67480.peg.2222 CDS gi|543389014|gb|AVFF01000001.1| 160108 158591 -1 - 1518 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67480.peg.2223 CDS gi|543389014|gb|AVFF01000001.1| 160247 160657 2 + 411 FIG00544572: hypothetical protein - none -
fig|6666666.67480.peg.2224 CDS gi|543389014|gb|AVFF01000001.1| 161719 160670 -1 - 1050 hypothetical protein - none -
fig|6666666.67480.peg.2225 CDS gi|543389014|gb|AVFF01000001.1| 162291 161722 -3 - 570 putative RNA polymerase sigma factor - none -
fig|6666666.67480.peg.2226 CDS gi|543389014|gb|AVFF01000001.1| 162634 162407 -1 - 228 hypothetical protein - none -
fig|6666666.67480.peg.2227 CDS gi|543389014|gb|AVFF01000001.1| 164275 162656 -1 - 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67480.peg.2228 CDS gi|543389014|gb|AVFF01000001.1| 164585 164292 -2 - 294 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67480.peg.2229 CDS gi|543389014|gb|AVFF01000001.1| 164575 164697 1 + 123 hypothetical protein - none -
fig|6666666.67480.peg.2230 CDS gi|543389014|gb|AVFF01000001.1| 165971 164916 -2 - 1056 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67480.peg.2231 CDS gi|543389014|gb|AVFF01000001.1| 166564 165968 -1 - 597 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67480.peg.2232 CDS gi|543389014|gb|AVFF01000001.1| 167272 166577 -1 - 696 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.67480.peg.2233 CDS gi|543389014|gb|AVFF01000001.1| 167796 167326 -3 - 471 Putative secreted protein - none -
fig|6666666.67480.peg.2234 CDS gi|543389014|gb|AVFF01000001.1| 168501 167932 -3 - 570 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67480.peg.2235 CDS gi|543389014|gb|AVFF01000001.1| 169220 168498 -2 - 723 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67480.peg.2236 CDS gi|543389014|gb|AVFF01000001.1| 169609 169286 -1 - 324 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67480.peg.2237 CDS gi|543389014|gb|AVFF01000001.1| 171559 169709 -1 - 1851 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67480.peg.2238 CDS gi|543389014|gb|AVFF01000001.1| 171672 172511 3 + 840 FIG00545792: hypothetical protein - none -
fig|6666666.67480.peg.2239 CDS gi|543389014|gb|AVFF01000001.1| 172838 172530 -2 - 309 hypothetical protein - none -
fig|6666666.67480.peg.2240 CDS gi|543389014|gb|AVFF01000001.1| 174511 172838 -1 - 1674 hypothetical protein - none -
fig|6666666.67480.peg.2241 CDS gi|543389014|gb|AVFF01000001.1| 174834 174508 -3 - 327 hypothetical protein - none -
fig|6666666.67480.peg.2242 CDS gi|543389014|gb|AVFF01000001.1| 176324 174981 -2 - 1344 Phosphoglucosamine mutase (EC 5.4.2.10) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67480.peg.2243 CDS gi|543389014|gb|AVFF01000001.1| 176428 177807 1 + 1380 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67480.peg.2244 CDS gi|543389014|gb|AVFF01000001.1| 178494 178838 3 + 345 Mobile element protein - none -
fig|6666666.67480.peg.2245 CDS gi|543389014|gb|AVFF01000001.1| 179091 179255 3 + 165 Mobile element protein - none -
fig|6666666.67480.peg.2246 CDS gi|543389014|gb|AVFF01000001.1| 181045 180506 -1 - 540 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.67480.peg.2247 CDS gi|543389014|gb|AVFF01000001.1| 181488 181045 -3 - 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67480.peg.2248 CDS gi|543389014|gb|AVFF01000001.1| 182099 181812 -2 - 288 FIG00544893: hypothetical protein - none -
fig|6666666.67480.peg.2249 CDS gi|543389014|gb|AVFF01000001.1| 182508 182191 -3 - 318 FIG00543840: hypothetical protein - none -
fig|6666666.67480.peg.2250 CDS gi|543389014|gb|AVFF01000001.1| 183840 182656 -3 - 1185 hypothetical protein - none -
fig|6666666.67480.peg.2251 CDS gi|543389014|gb|AVFF01000001.1| 187934 183837 -2 - 4098 FtsK/SpoIIIE family protein - none -
fig|6666666.67480.peg.2252 CDS gi|543389014|gb|AVFF01000001.1| 188085 189479 3 + 1395 Putative surface-anchored membrane protein - none -
fig|6666666.67480.peg.2253 CDS gi|543389014|gb|AVFF01000001.1| 189479 191023 2 + 1545 subtilisin-like serine protease - none -
fig|6666666.67480.peg.2254 CDS gi|543389014|gb|AVFF01000001.1| 192712 191144 -1 - 1569 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67480.peg.2255 CDS gi|543389014|gb|AVFF01000001.1| 193617 192778 -3 - 840 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67480.peg.2256 CDS gi|543389014|gb|AVFF01000001.1| 194437 193652 -1 - 786 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67480.peg.2257 CDS gi|543389014|gb|AVFF01000001.1| 194604 195566 3 + 963 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67480.peg.2258 CDS gi|543389014|gb|AVFF01000001.1| 195703 196488 1 + 786 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67480.peg.2259 CDS gi|543389014|gb|AVFF01000001.1| 196485 197357 3 + 873 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.67480.peg.2260 CDS gi|543389014|gb|AVFF01000001.1| 197354 198220 2 + 867 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.67480.peg.2261 CDS gi|543389014|gb|AVFF01000001.1| 198505 198302 -1 - 204 hypothetical protein - none -
fig|6666666.67480.peg.2262 CDS gi|543389014|gb|AVFF01000001.1| 199169 198672 -2 - 498 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67480.peg.2263 CDS gi|543389014|gb|AVFF01000001.1| 200291 199284 -2 - 1008 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67480.peg.2264 CDS gi|543389014|gb|AVFF01000001.1| 200978 200373 -2 - 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.67480.peg.2265 CDS gi|543389014|gb|AVFF01000001.1| 201401 201000 -2 - 402 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.67480.peg.2266 CDS gi|543389014|gb|AVFF01000001.1| 201773 201405 -2 - 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.67480.peg.2267 CDS gi|543389014|gb|AVFF01000001.1| 202178 201960 -2 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67480.peg.2268 CDS gi|543389014|gb|AVFF01000001.1| 203138 202446 -2 - 693 Putative secreted protein - none -
fig|6666666.67480.peg.2269 CDS gi|543389014|gb|AVFF01000001.1| 203797 203252 -1 - 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67480.peg.2270 CDS gi|543389014|gb|AVFF01000001.1| 204720 203797 -3 - 924 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67480.rna.1 RNA gi|543383716|gb|AVFF01000096.1| 32768 32840 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.67480.rna.2 RNA gi|543383716|gb|AVFF01000096.1| 37946 38018 2 + 73 tRNA-Glu-TTC - none -
fig|6666666.67480.rna.3 RNA gi|543383716|gb|AVFF01000096.1| 38050 38123 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.67480.rna.4 RNA gi|543383716|gb|AVFF01000096.1| 39305 39378 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.67480.rna.5 RNA gi|543383716|gb|AVFF01000096.1| 39433 39505 1 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.67480.rna.6 RNA gi|543383716|gb|AVFF01000096.1| 49586 49658 2 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.67480.rna.7 RNA gi|543383716|gb|AVFF01000096.1| 75877 75958 1 + 82 tRNA-Leu-TAG - none -
fig|6666666.67480.rna.8 RNA gi|543384045|gb|AVFF01000085.1| 53426 53511 2 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.67480.rna.9 RNA gi|543384045|gb|AVFF01000085.1| 73762 73835 1 + 74 tRNA-Pro-GGG tRNAs
fig|6666666.67480.rna.10 RNA gi|543384717|gb|AVFF01000063.1| 97623 97696 3 + 74 tRNA-Met-CAT - none -
fig|6666666.67480.rna.11 RNA gi|543384867|gb|AVFF01000061.1| 3142 3227 1 + 86 tRNA-Pseudo-GGA - none -
fig|6666666.67480.rna.12 RNA gi|543385158|gb|AVFF01000052.1| 1 121 1 + 121 5S RNA - none -
fig|6666666.67480.rna.13 RNA gi|543385158|gb|AVFF01000052.1| 108657 108584 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.67480.rna.14 RNA gi|543385382|gb|AVFF01000049.1| 1 774 1 + 774 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67480.rna.15 RNA gi|543385382|gb|AVFF01000049.1| 1 829 1 + 829 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67480.rna.16 RNA gi|543385382|gb|AVFF01000049.1| 1216 4281 1 + 3066 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67480.rna.17 RNA gi|543385382|gb|AVFF01000049.1| 4414 4536 1 + 123 5S RNA - none -
fig|6666666.67480.rna.18 RNA gi|543385673|gb|AVFF01000043.1| 272 359 2 + 88 tRNA-Ser-CGA tRNAs
fig|6666666.67480.rna.19 RNA gi|543385745|gb|AVFF01000041.1| 162 1 -3 - 162 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67480.rna.20 RNA gi|543386348|gb|AVFF01000034.1| 9664 9737 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.67480.rna.21 RNA gi|543386348|gb|AVFF01000034.1| 9751 9823 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.67480.rna.22 RNA gi|543386369|gb|AVFF01000033.1| 11822 11893 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.67480.rna.23 RNA gi|543386369|gb|AVFF01000033.1| 16300 16373 1 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.67480.rna.24 RNA gi|543386878|gb|AVFF01000032.1| 6031 5959 -1 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67480.rna.25 RNA gi|543386878|gb|AVFF01000032.1| 11693 11605 -2 - 89 tRNA-Pseudo-GCT - none -
fig|6666666.67480.rna.26 RNA gi|543386878|gb|AVFF01000032.1| 13889 13805 -2 - 85 tRNA-Ser-TGA - none -
fig|6666666.67480.rna.27 RNA gi|543386950|gb|AVFF01000030.1| 986 1057 2 + 72 tRNA-Gln-TTG - none -
fig|6666666.67480.rna.28 RNA gi|543386950|gb|AVFF01000030.1| 17119 17192 1 + 74 tRNA-Leu-TAA - none -
fig|6666666.67480.rna.29 RNA gi|543386950|gb|AVFF01000030.1| 105381 105308 -3 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.67480.rna.30 RNA gi|543387126|gb|AVFF01000029.1| 237 165 -3 - 73 tRNA-Lys-CTT - none -
fig|6666666.67480.rna.31 RNA gi|543387126|gb|AVFF01000029.1| 5170 5098 -1 - 73 tRNA-His-GTG - none -
fig|6666666.67480.rna.32 RNA gi|543387126|gb|AVFF01000029.1| 7036 6963 -1 - 74 tRNA-Arg-TCT - none -
fig|6666666.67480.rna.33 RNA gi|543387295|gb|AVFF01000023.1| 30144 30060 -3 - 85 tRNA-Leu-CAG tRNAs
fig|6666666.67480.rna.34 RNA gi|543387323|gb|AVFF01000022.1| 8553 8625 3 + 73 tRNA-Thr-CGT - none -
fig|6666666.67480.rna.35 RNA gi|543387405|gb|AVFF01000020.1| 11916 12007 3 + 92 tRNA-SeC(p)-TCA - none -
fig|6666666.67480.rna.36 RNA gi|543387448|gb|AVFF01000019.1| 57524 57452 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67480.rna.37 RNA gi|543387448|gb|AVFF01000019.1| 57657 57585 -3 - 73 tRNA-Val-GAC tRNAs
fig|6666666.67480.rna.38 RNA gi|543387448|gb|AVFF01000019.1| 57761 57691 -2 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.67480.rna.39 RNA gi|543387448|gb|AVFF01000019.1| 57879 57807 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67480.rna.40 RNA gi|543387448|gb|AVFF01000019.1| 57982 57910 -1 - 73 tRNA-Val-GAC tRNAs
fig|6666666.67480.rna.41 RNA gi|543387448|gb|AVFF01000019.1| 58135 58063 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67480.rna.42 RNA gi|543387792|gb|AVFF01000017.1| 2876 2804 -2 - 73 tRNA-Thr-TGT - none -
fig|6666666.67480.rna.43 RNA gi|543387891|gb|AVFF01000016.1| 5619 5547 -3 - 73 tRNA-Asn-GTT - none -
fig|6666666.67480.rna.44 RNA gi|543387891|gb|AVFF01000016.1| 7447 7520 1 + 74 tRNA-Met-CAT - none -
fig|6666666.67480.rna.45 RNA gi|543387891|gb|AVFF01000016.1| 29995 30067 1 + 73 tRNA-Val-TAC - none -
fig|6666666.67480.rna.46 RNA gi|543387967|gb|AVFF01000015.1| 2422 2349 -1 - 74 tRNA-Leu-CAA tRNAs
fig|6666666.67480.rna.47 RNA gi|543387967|gb|AVFF01000015.1| 24510 24438 -3 - 73 tRNA-Glu-CTC - none -
fig|6666666.67480.rna.48 RNA gi|543387967|gb|AVFF01000015.1| 24615 24544 -3 - 72 tRNA-Gln-CTG - none -
fig|6666666.67480.rna.49 RNA gi|543388248|gb|AVFF01000012.1| 36750 36822 3 + 73 tRNA-Arg-CCT - none -
fig|6666666.67480.rna.50 RNA gi|543388248|gb|AVFF01000012.1| 61237 61115 -1 - 123 5S RNA - none -
fig|6666666.67480.rna.51 RNA gi|543388354|gb|AVFF01000011.1| 11198 11126 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.67480.rna.52 RNA gi|543388354|gb|AVFF01000011.1| 11389 11318 -1 - 72 tRNA-Met-CAT - none -
fig|6666666.67480.rna.53 RNA gi|543388354|gb|AVFF01000011.1| 11505 11433 -3 - 73 tRNA-Thr-GGT - none -
fig|6666666.67480.rna.54 RNA gi|543388354|gb|AVFF01000011.1| 14210 14129 -2 - 82 tRNA-Tyr-GTA - none -