fig|6666666.67496.peg.1 CDS gi|512068193|gb|ATBY01000017.1| 669 253 -3 - 417 hypothetical protein - none -
fig|6666666.67496.peg.2 CDS gi|512068193|gb|ATBY01000017.1| 949 2871 1 + 1923 xanthine/uracil permease - none -
fig|6666666.67496.peg.3 CDS gi|512068193|gb|ATBY01000017.1| 4273 3905 -1 - 369 FIG016027: protein of unknown function YeaO - none -
fig|6666666.67496.peg.4 CDS gi|512068193|gb|ATBY01000017.1| 4765 4274 -1 - 492 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67496.peg.5 CDS gi|512068193|gb|ATBY01000017.1| 5691 4795 -3 - 897 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67496.peg.6 CDS gi|512068193|gb|ATBY01000017.1| 6386 5697 -2 - 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67496.peg.7 CDS gi|512068193|gb|ATBY01000017.1| 7215 6463 -3 - 753 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.67496.peg.8 CDS gi|512068193|gb|ATBY01000017.1| 8351 7212 -2 - 1140 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.67496.peg.9 CDS gi|512068193|gb|ATBY01000017.1| 9356 8355 -2 - 1002 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.67496.peg.10 CDS gi|512068193|gb|ATBY01000017.1| 10536 9550 -3 - 987 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.67496.peg.11 CDS gi|512068193|gb|ATBY01000017.1| 11007 12116 3 + 1110 hypothetical protein - none -
fig|6666666.67496.peg.12 CDS gi|512068193|gb|ATBY01000017.1| 12883 12215 -1 - 669 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.67496.peg.13 CDS gi|512068193|gb|ATBY01000017.1| 13985 12876 -2 - 1110 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67496.peg.14 CDS gi|512068193|gb|ATBY01000017.1| 14025 14873 3 + 849 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67496.peg.15 CDS gi|512068193|gb|ATBY01000017.1| 14870 15628 2 + 759 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67496.peg.16 CDS gi|512068193|gb|ATBY01000017.1| 16591 15716 -1 - 876 hypothetical protein - none -
fig|6666666.67496.peg.17 CDS gi|512068193|gb|ATBY01000017.1| 17275 16913 -1 - 363 Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67496.peg.18 CDS gi|512068193|gb|ATBY01000017.1| 17563 17303 -1 - 261 Clusters with Methylmalonyl-CoA carboxyltransferase (EC 2.1.3.1) - none -
fig|6666666.67496.peg.19 CDS gi|512068193|gb|ATBY01000017.1| 19137 17581 -3 - 1557 Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67496.peg.20 CDS gi|512068193|gb|ATBY01000017.1| 20661 19156 -3 - 1506 Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67496.peg.21 CDS gi|512068193|gb|ATBY01000017.1| 21288 21908 3 + 621 hypothetical protein - none -
fig|6666666.67496.peg.22 CDS gi|512068193|gb|ATBY01000017.1| 22720 22124 -1 - 597 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.67496.peg.23 CDS gi|512068193|gb|ATBY01000017.1| 22956 23903 3 + 948 hypothetical protein - none -
fig|6666666.67496.peg.24 CDS gi|512068193|gb|ATBY01000017.1| 23904 25508 3 + 1605 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.67496.peg.25 CDS gi|512068193|gb|ATBY01000017.1| 25639 26637 1 + 999 Modification methylase NgoMIV (EC 2.1.1.37) - none -
fig|6666666.67496.peg.26 CDS gi|512068193|gb|ATBY01000017.1| 27421 27564 1 + 144 Type II restriction enzyme NgoMIV (EC 3.1.21.4) - none -
fig|6666666.67496.peg.27 CDS gi|512068193|gb|ATBY01000017.1| 28251 27595 -3 - 657 No significant database matches - none -
fig|6666666.67496.peg.28 CDS gi|512068193|gb|ATBY01000017.1| 28560 29555 3 + 996 monooxygenase, putative - none -
fig|6666666.67496.peg.29 CDS gi|512068193|gb|ATBY01000017.1| 29775 31100 3 + 1326 hypothetical protein - none -
fig|6666666.67496.peg.30 CDS gi|512068193|gb|ATBY01000017.1| 32432 32256 -2 - 177 hypothetical protein - none -
fig|6666666.67496.peg.31 CDS gi|512068193|gb|ATBY01000017.1| 32383 33294 1 + 912 hypothetical protein - none -
fig|6666666.67496.peg.32 CDS gi|512068193|gb|ATBY01000017.1| 35651 33291 -2 - 2361 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67496.peg.33 CDS gi|512068193|gb|ATBY01000017.1| 36224 37180 2 + 957 Putative membrane protein - none -
fig|6666666.67496.peg.34 CDS gi|512068193|gb|ATBY01000017.1| 37183 38172 1 + 990 FIG00544165: hypothetical protein - none -
fig|6666666.67496.peg.35 CDS gi|512068193|gb|ATBY01000017.1| 39226 39897 1 + 672 Mobile element protein - none -
fig|6666666.67496.peg.36 CDS gi|512068193|gb|ATBY01000017.1| 39999 40130 3 + 132 hypothetical protein - none -
fig|6666666.67496.peg.37 CDS gi|512068193|gb|ATBY01000017.1| 40747 40427 -1 - 321 FIG00544707: hypothetical protein - none -
fig|6666666.67496.peg.38 CDS gi|512068193|gb|ATBY01000017.1| 41104 40766 -1 - 339 FIG00544707: hypothetical protein - none -
fig|6666666.67496.peg.39 CDS gi|512068193|gb|ATBY01000017.1| 41713 41153 -1 - 561 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67496.peg.40 CDS gi|512068193|gb|ATBY01000017.1| 43176 41746 -3 - 1431 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67496.peg.41 CDS gi|512068193|gb|ATBY01000017.1| 43186 43425 1 + 240 hypothetical protein - none -
fig|6666666.67496.peg.42 CDS gi|512068193|gb|ATBY01000017.1| 43591 43439 -1 - 153 Cation transport ATPase - none -
fig|6666666.67496.peg.43 CDS gi|512068193|gb|ATBY01000017.1| 45041 43914 -2 - 1128 two-component system, sensory transduction histidine kinase - none -
fig|6666666.67496.peg.44 CDS gi|512068193|gb|ATBY01000017.1| 45760 45038 -1 - 723 two-component system, response regulator - none -
fig|6666666.67496.peg.45 CDS gi|512068193|gb|ATBY01000017.1| 46164 46739 3 + 576 putative exported protein - none -
fig|6666666.67496.peg.46 CDS gi|512068193|gb|ATBY01000017.1| 46810 48291 1 + 1482 Multicopper oxidase Copper homeostasis
fig|6666666.67496.peg.47 CDS gi|512068193|gb|ATBY01000017.1| 48306 48428 3 + 123 hypothetical protein - none -
fig|6666666.67496.peg.48 CDS gi|512068193|gb|ATBY01000017.1| 48551 48435 -2 - 117 hypothetical protein - none -
fig|6666666.67496.peg.49 CDS gi|512068193|gb|ATBY01000017.1| 48955 48728 -1 - 228 hypothetical protein - none -
fig|6666666.67496.peg.50 CDS gi|512068193|gb|ATBY01000017.1| 49721 50338 2 + 618 Resolvase/integrase - none -
fig|6666666.67496.peg.51 CDS gi|512068193|gb|ATBY01000017.1| 50764 51345 1 + 582 hypothetical protein - none -
fig|6666666.67496.peg.52 CDS gi|512068193|gb|ATBY01000017.1| 52794 51412 -3 - 1383 Mercuric ion reductase (EC 1.16.1.1) Mercuric reductase;
Mercury resistance operon
fig|6666666.67496.peg.53 CDS gi|512068193|gb|ATBY01000017.1| 52902 53297 3 + 396 Mercuric resistance operon regulatory protein Mercury resistance operon
fig|6666666.67496.peg.54 CDS gi|512068193|gb|ATBY01000017.1| 53424 54002 3 + 579 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67496.peg.55 CDS gi|512068193|gb|ATBY01000017.1| 54036 55031 3 + 996 monooxygenase, putative - none -
fig|6666666.67496.peg.56 CDS gi|512068193|gb|ATBY01000017.1| 55782 55904 3 + 123 hypothetical protein - none -
fig|6666666.67496.peg.57 CDS gi|512068193|gb|ATBY01000017.1| 56028 56243 3 + 216 hypothetical protein - none -
fig|6666666.67496.peg.58 CDS gi|512068193|gb|ATBY01000017.1| 57213 58346 3 + 1134 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67496.peg.59 CDS gi|512068193|gb|ATBY01000017.1| 59798 58434 -2 - 1365 putative transport protein - none -
fig|6666666.67496.peg.60 CDS gi|512068193|gb|ATBY01000017.1| 60293 60162 -2 - 132 hypothetical protein - none -
fig|6666666.67496.peg.61 CDS gi|512068193|gb|ATBY01000017.1| 63311 60357 -2 - 2955 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67496.peg.62 CDS gi|512068193|gb|ATBY01000017.1| 63397 63927 1 + 531 FIG129854: hypothetical protein - none -
fig|6666666.67496.peg.63 CDS gi|512068193|gb|ATBY01000017.1| 64272 64520 3 + 249 FIG00544133: hypothetical protein - none -
fig|6666666.67496.peg.64 CDS gi|512068193|gb|ATBY01000017.1| 65866 64847 -1 - 1020 Lon-like protease with PDZ domain - none -
fig|6666666.67496.peg.65 CDS gi|512068193|gb|ATBY01000017.1| 65997 67505 3 + 1509 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67496.peg.66 CDS gi|512068193|gb|ATBY01000017.1| 68198 67632 -2 - 567 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67496.peg.67 CDS gi|512068193|gb|ATBY01000017.1| 71368 69311 -1 - 2058 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67496.peg.68 CDS gi|512068193|gb|ATBY01000017.1| 72155 71361 -2 - 795 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67496.peg.69 CDS gi|512068193|gb|ATBY01000017.1| 73263 72187 -3 - 1077 Potassium channel protein Potassium homeostasis
fig|6666666.67496.peg.70 CDS gi|512068193|gb|ATBY01000017.1| 76956 73396 -3 - 3561 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67496.peg.71 CDS gi|512068193|gb|ATBY01000017.1| 80044 76940 -1 - 3105 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67496.peg.72 CDS gi|512068193|gb|ATBY01000017.1| 80939 80058 -2 - 882 FIG00544868: hypothetical protein - none -
fig|6666666.67496.peg.73 CDS gi|512068193|gb|ATBY01000017.1| 82029 80929 -3 - 1101 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67496.peg.74 CDS gi|512068193|gb|ATBY01000017.1| 83063 82164 -2 - 900 FIG00544386: hypothetical protein - none -
fig|6666666.67496.peg.75 CDS gi|512068193|gb|ATBY01000017.1| 83395 83171 -1 - 225 hypothetical protein - none -
fig|6666666.67496.peg.76 CDS gi|512068193|gb|ATBY01000017.1| 83736 85094 3 + 1359 putative ATP-dependent RNA helicase - none -
fig|6666666.67496.peg.77 CDS gi|512068193|gb|ATBY01000017.1| 85133 86350 2 + 1218 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67496.peg.78 CDS gi|512068193|gb|ATBY01000017.1| 86814 86344 -3 - 471 FIG00543921: hypothetical protein - none -
fig|6666666.67496.peg.79 CDS gi|512068193|gb|ATBY01000017.1| 87001 88020 1 + 1020 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.67496.peg.80 CDS gi|512068193|gb|ATBY01000017.1| 88652 88909 2 + 258 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67496.peg.81 CDS gi|512068193|gb|ATBY01000017.1| 89765 89451 -2 - 315 FIG00544827: hypothetical protein - none -
fig|6666666.67496.peg.82 CDS gi|512068193|gb|ATBY01000017.1| 90367 89765 -1 - 603 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.67496.peg.83 CDS gi|512068193|gb|ATBY01000017.1| 90451 90933 1 + 483 Cys-tRNA(Pro) deacylase YbaK - none -
fig|6666666.67496.peg.84 CDS gi|512068193|gb|ATBY01000017.1| 91728 90964 -3 - 765 FIG00543821: hypothetical protein - none -
fig|6666666.67496.peg.85 CDS gi|512068193|gb|ATBY01000017.1| 91838 93034 2 + 1197 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67496.peg.86 CDS gi|512068193|gb|ATBY01000017.1| 93171 94025 3 + 855 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.67496.peg.87 CDS gi|512068193|gb|ATBY01000017.1| 94490 95428 2 + 939 Putative secreted protein - none -
fig|6666666.67496.peg.88 CDS gi|512068193|gb|ATBY01000017.1| 95508 96272 3 + 765 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67496.peg.89 CDS gi|512068193|gb|ATBY01000017.1| 96269 97147 2 + 879 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.67496.peg.90 CDS gi|512068193|gb|ATBY01000017.1| 97144 97992 1 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.67496.peg.91 CDS gi|512068193|gb|ATBY01000017.1| 98473 97967 -1 - 507 FIG00544397: hypothetical protein - none -
fig|6666666.67496.peg.92 CDS gi|512068193|gb|ATBY01000017.1| 98883 98473 -3 - 411 FIG00996758: hypothetical protein - none -
fig|6666666.67496.peg.93 CDS gi|512068193|gb|ATBY01000017.1| 99429 99292 -3 - 138 hypothetical protein - none -
fig|6666666.67496.peg.94 CDS gi|512068193|gb|ATBY01000017.1| 99428 99646 2 + 219 hypothetical protein - none -
fig|6666666.67496.peg.95 CDS gi|512068193|gb|ATBY01000017.1| 102320 99729 -2 - 2592 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67496.peg.96 CDS gi|512068193|gb|ATBY01000017.1| 103224 102550 -3 - 675 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67496.peg.97 CDS gi|512068193|gb|ATBY01000017.1| 104018 103413 -2 - 606 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.67496.peg.98 CDS gi|512068193|gb|ATBY01000017.1| 105789 104128 -3 - 1662 LpqB - none -
fig|6666666.67496.peg.99 CDS gi|512068193|gb|ATBY01000017.1| 107747 105828 -2 - 1920 Putative two component system sensor kinase - none -
fig|6666666.67496.peg.100 CDS gi|512068193|gb|ATBY01000017.1| 108416 107754 -2 - 663 DNA-binding response regulator mtrA - none -
fig|6666666.67496.peg.101 CDS gi|512068193|gb|ATBY01000017.1| 109625 109011 -2 - 615 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.67496.peg.102 CDS gi|512068193|gb|ATBY01000017.1| 110280 109915 -3 - 366 FIG00544092: hypothetical protein - none -
fig|6666666.67496.peg.103 CDS gi|512068193|gb|ATBY01000017.1| 110303 111325 2 + 1023 Cell surface glycoprotein 1 precursor - none -
fig|6666666.67496.peg.104 CDS gi|512068193|gb|ATBY01000017.1| 112634 111489 -2 - 1146 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67496.peg.105 CDS gi|512068193|gb|ATBY01000017.1| 113486 112638 -2 - 849 FIG00545059: hypothetical protein - none -
fig|6666666.67496.peg.106 CDS gi|512068193|gb|ATBY01000017.1| 114915 113527 -3 - 1389 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67496.peg.107 CDS gi|512068193|gb|ATBY01000017.1| 115402 115016 -1 - 387 FIG00543823: hypothetical protein - none -
fig|6666666.67496.peg.108 CDS gi|512068193|gb|ATBY01000017.1| 115676 116017 2 + 342 FIG00544777: hypothetical protein - none -
fig|6666666.67496.peg.109 CDS gi|512068193|gb|ATBY01000017.1| 116430 116104 -3 - 327 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67496.peg.110 CDS gi|512068193|gb|ATBY01000017.1| 117938 116850 -2 - 1089 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67496.peg.111 CDS gi|512068193|gb|ATBY01000017.1| 118836 117949 -3 - 888 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67496.peg.112 CDS gi|512068193|gb|ATBY01000017.1| 119690 118833 -2 - 858 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67496.peg.113 CDS gi|512068193|gb|ATBY01000017.1| 119760 121310 3 + 1551 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67496.peg.114 CDS gi|512068193|gb|ATBY01000017.1| 121298 121918 2 + 621 FIG00545912: hypothetical protein - none -
fig|6666666.67496.peg.115 CDS gi|512068193|gb|ATBY01000017.1| 121928 122959 2 + 1032 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67496.peg.116 CDS gi|512068193|gb|ATBY01000017.1| 123036 124295 3 + 1260 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67496.peg.117 CDS gi|512068193|gb|ATBY01000017.1| 125213 124341 -2 - 873 putative phospholipase - none -
fig|6666666.67496.peg.118 CDS gi|512068193|gb|ATBY01000017.1| 125265 126293 3 + 1029 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67496.peg.119 CDS gi|512068193|gb|ATBY01000017.1| 126290 127111 2 + 822 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67496.peg.120 CDS gi|512068193|gb|ATBY01000017.1| 128323 127169 -1 - 1155 No significant database matches - none -
fig|6666666.67496.peg.121 CDS gi|512068193|gb|ATBY01000017.1| 128853 128401 -3 - 453 FIG00546022: hypothetical protein - none -
fig|6666666.67496.peg.122 CDS gi|512068193|gb|ATBY01000017.1| 129325 128855 -1 - 471 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67496.peg.123 CDS gi|512068193|gb|ATBY01000017.1| 130463 129345 -2 - 1119 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67496.peg.124 CDS gi|512068193|gb|ATBY01000017.1| 130963 130505 -1 - 459 FIG00545249: hypothetical protein - none -
fig|6666666.67496.peg.125 CDS gi|512068193|gb|ATBY01000017.1| 131758 130967 -1 - 792 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.67496.peg.126 CDS gi|512068193|gb|ATBY01000017.1| 131992 133620 1 + 1629 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67496.peg.127 CDS gi|512068193|gb|ATBY01000017.1| 133652 133942 2 + 291 FIG00544173: hypothetical protein - none -
fig|6666666.67496.peg.128 CDS gi|512068193|gb|ATBY01000017.1| 134220 136232 3 + 2013 oligopeptide transporter - none -
fig|6666666.67496.peg.129 CDS gi|512068193|gb|ATBY01000017.1| 136296 136892 3 + 597 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67496.peg.130 CDS gi|512068193|gb|ATBY01000017.1| 136903 137301 1 + 399 FIG00547406: hypothetical protein - none -
fig|6666666.67496.peg.131 CDS gi|512068193|gb|ATBY01000017.1| 139371 137323 -3 - 2049 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67496.peg.132 CDS gi|512068193|gb|ATBY01000017.1| 139605 140459 3 + 855 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67496.peg.133 CDS gi|512068193|gb|ATBY01000017.1| 140660 142441 2 + 1782 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67496.peg.134 CDS gi|512068193|gb|ATBY01000017.1| 146031 142582 -3 - 3450 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67496.peg.135 CDS gi|512068193|gb|ATBY01000017.1| 147624 146215 -3 - 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.67496.peg.136 CDS gi|512068193|gb|ATBY01000017.1| 148960 147770 -1 - 1191 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67496.peg.137 CDS gi|512068193|gb|ATBY01000017.1| 149074 150675 1 + 1602 putative phospho-sugar mutase - none -
fig|6666666.67496.peg.138 CDS gi|512068193|gb|ATBY01000017.1| 151180 150677 -1 - 504 Putative DNA-binding protein - none -
fig|6666666.67496.peg.139 CDS gi|512068193|gb|ATBY01000017.1| 152114 151398 -2 - 717 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67496.peg.140 CDS gi|512068193|gb|ATBY01000017.1| 152099 152380 2 + 282 hypothetical protein - none -
fig|6666666.67496.peg.141 CDS gi|512068193|gb|ATBY01000017.1| 152377 153264 1 + 888 FIG00544549: hypothetical protein - none -
fig|6666666.67496.peg.142 CDS gi|512068193|gb|ATBY01000017.1| 153290 154540 2 + 1251 FIG026501: hypothetical protein - none -
fig|6666666.67496.peg.143 CDS gi|512068193|gb|ATBY01000017.1| 154546 155745 1 + 1200 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.144 CDS gi|512068193|gb|ATBY01000017.1| 155851 157023 1 + 1173 hypothetical protein - none -
fig|6666666.67496.peg.145 CDS gi|512068193|gb|ATBY01000017.1| 157853 157020 -2 - 834 FIG00545198: hypothetical protein - none -
fig|6666666.67496.peg.146 CDS gi|512068193|gb|ATBY01000017.1| 158965 157880 -1 - 1086 putative membrane protein - none -
fig|6666666.67496.peg.147 CDS gi|512068193|gb|ATBY01000017.1| 160025 159012 -2 - 1014 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67496.peg.148 CDS gi|512068193|gb|ATBY01000017.1| 160747 160037 -1 - 711 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.67496.peg.149 CDS gi|512068193|gb|ATBY01000017.1| 161624 160740 -2 - 885 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67496.peg.150 CDS gi|512068193|gb|ATBY01000017.1| 161695 163818 1 + 2124 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.67496.peg.151 CDS gi|512068193|gb|ATBY01000017.1| 163935 164174 3 + 240 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.67496.peg.152 CDS gi|512068193|gb|ATBY01000017.1| 165406 164171 -1 - 1236 putative transport protein - none -
fig|6666666.67496.peg.153 CDS gi|512068193|gb|ATBY01000017.1| 165613 166938 1 + 1326 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67496.peg.154 CDS gi|512068193|gb|ATBY01000017.1| 166959 169196 3 + 2238 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67496.peg.155 CDS gi|512068193|gb|ATBY01000017.1| 169203 170111 3 + 909 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67496.peg.156 CDS gi|512068193|gb|ATBY01000017.1| 170141 171193 2 + 1053 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67496.peg.157 CDS gi|512068193|gb|ATBY01000017.1| 171438 171202 -3 - 237 hypothetical membrane protein - none -
fig|6666666.67496.peg.158 CDS gi|512068193|gb|ATBY01000017.1| 172366 171527 -1 - 840 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67496.peg.159 CDS gi|512068193|gb|ATBY01000017.1| 172484 172888 2 + 405 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67496.peg.160 CDS gi|512068193|gb|ATBY01000017.1| 174090 172885 -3 - 1206 hypothetical protein - none -
fig|6666666.67496.peg.161 CDS gi|512068193|gb|ATBY01000017.1| 175501 174182 -1 - 1320 transmembrane protein, distant homology with ydbT - none -
fig|6666666.67496.peg.162 CDS gi|512068193|gb|ATBY01000017.1| 175965 175498 -3 - 468 transmembrane protein, distant homology with ydbS - none -
fig|6666666.67496.peg.163 CDS gi|512068193|gb|ATBY01000017.1| 176201 176797 2 + 597 hypothetical protein - none -
fig|6666666.67496.peg.164 CDS gi|512068193|gb|ATBY01000017.1| 179964 176854 -3 - 3111 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67496.peg.165 CDS gi|512068193|gb|ATBY01000017.1| 180144 181022 3 + 879 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.166 CDS gi|512068193|gb|ATBY01000017.1| 181075 182148 1 + 1074 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.167 CDS gi|512068193|gb|ATBY01000017.1| 182151 182828 3 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.168 CDS gi|512068193|gb|ATBY01000017.1| 184265 183369 -2 - 897 FIG00546271: hypothetical protein - none -
fig|6666666.67496.peg.169 CDS gi|512068193|gb|ATBY01000017.1| 184341 184961 3 + 621 No significant database matches - none -
fig|6666666.67496.peg.170 CDS gi|512068193|gb|ATBY01000017.1| 186505 184958 -1 - 1548 DNA polymerase-like protein PA0670 - none -
fig|6666666.67496.peg.171 CDS gi|512068193|gb|ATBY01000017.1| 187183 186509 -1 - 675 hypothetical protein - none -
fig|6666666.67496.peg.172 CDS gi|512068193|gb|ATBY01000017.1| 187232 187657 2 + 426 hypothetical membrane protein - none -
fig|6666666.67496.peg.173 CDS gi|512068193|gb|ATBY01000017.1| 187683 189071 3 + 1389 hypothetical protein - none -
fig|6666666.67496.peg.174 CDS gi|512068193|gb|ATBY01000017.1| 190652 189102 -2 - 1551 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.67496.peg.175 CDS gi|512068193|gb|ATBY01000017.1| 190778 191800 2 + 1023 No significant database matches - none -
fig|6666666.67496.peg.176 CDS gi|512068193|gb|ATBY01000017.1| 192926 191802 -2 - 1125 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67496.peg.177 CDS gi|512068193|gb|ATBY01000017.1| 194466 192940 -3 - 1527 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67496.peg.178 CDS gi|512068193|gb|ATBY01000017.1| 195653 194667 -2 - 987 hypothetical protein - none -
fig|6666666.67496.peg.179 CDS gi|512068193|gb|ATBY01000017.1| 196221 195646 -3 - 576 putative RNA polymerase sigma factor - none -
fig|6666666.67496.peg.180 CDS gi|512068193|gb|ATBY01000017.1| 196703 196503 -2 - 201 hypothetical protein - none -
fig|6666666.67496.peg.181 CDS gi|512068193|gb|ATBY01000017.1| 198351 196771 -3 - 1581 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67496.peg.182 CDS gi|512068193|gb|ATBY01000017.1| 198647 198357 -2 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67496.peg.183 CDS gi|512068193|gb|ATBY01000017.1| 200852 199002 -2 - 1851 Ferrous iron transport protein B - none -
fig|6666666.67496.peg.184 CDS gi|512068193|gb|ATBY01000017.1| 201209 201024 -2 - 186 hypothetical protein - none -
fig|6666666.67496.peg.185 CDS gi|512068193|gb|ATBY01000017.1| 201569 202018 2 + 450 hypothetical protein - none -
fig|6666666.67496.peg.186 CDS gi|512068193|gb|ATBY01000017.1| 202034 202555 2 + 522 hypothetical protein - none -
fig|6666666.67496.peg.187 CDS gi|512068193|gb|ATBY01000017.1| 203405 202506 -2 - 900 FIG00544618: hypothetical protein - none -
fig|6666666.67496.peg.188 CDS gi|512068193|gb|ATBY01000017.1| 203952 203524 -3 - 429 FIG00543939: hypothetical protein - none -
fig|6666666.67496.peg.189 CDS gi|512068193|gb|ATBY01000017.1| 204174 205655 3 + 1482 sugar kinase - none -
fig|6666666.67496.peg.190 CDS gi|512068193|gb|ATBY01000017.1| 211923 205750 -3 - 6174 hypothetical protein - none -
fig|6666666.67496.peg.191 CDS gi|512068193|gb|ATBY01000017.1| 213274 212237 -1 - 1038 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67496.peg.192 CDS gi|512068193|gb|ATBY01000017.1| 213745 213278 -1 - 468 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67496.peg.193 CDS gi|512068193|gb|ATBY01000017.1| 214421 213732 -2 - 690 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.67496.peg.194 CDS gi|512068193|gb|ATBY01000017.1| 215067 214495 -3 - 573 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67496.peg.195 CDS gi|512068193|gb|ATBY01000017.1| 216253 215126 -1 - 1128 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67496.peg.196 CDS gi|512068193|gb|ATBY01000017.1| 217114 216332 -1 - 783 hypothetical protein - none -
fig|6666666.67496.peg.197 CDS gi|512068193|gb|ATBY01000017.1| 217285 218190 1 + 906 FIG00545792: hypothetical protein - none -
fig|6666666.67496.peg.198 CDS gi|512068193|gb|ATBY01000017.1| 218454 218233 -3 - 222 hypothetical protein - none -
fig|6666666.67496.peg.199 CDS gi|512068193|gb|ATBY01000017.1| 220037 218451 -2 - 1587 VgrG protein - none -
fig|6666666.67496.peg.200 CDS gi|512068193|gb|ATBY01000017.1| 220279 220037 -1 - 243 hypothetical protein - none -
fig|6666666.67496.peg.201 CDS gi|512068193|gb|ATBY01000017.1| 221890 220547 -1 - 1344 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67496.peg.202 CDS gi|512068193|gb|ATBY01000017.1| 221909 222025 2 + 117 hypothetical protein - none -
fig|6666666.67496.peg.203 CDS gi|512068193|gb|ATBY01000017.1| 222158 222634 2 + 477 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67496.peg.204 CDS gi|512068193|gb|ATBY01000017.1| 223327 222746 -1 - 582 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.67496.peg.205 CDS gi|512068193|gb|ATBY01000017.1| 223767 223324 -3 - 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67496.peg.206 CDS gi|512068193|gb|ATBY01000017.1| 224495 224205 -2 - 291 FIG00544893: hypothetical protein - none -
fig|6666666.67496.peg.207 CDS gi|512068193|gb|ATBY01000017.1| 224871 224554 -3 - 318 FIG00543840: hypothetical protein - none -
fig|6666666.67496.peg.208 CDS gi|512068193|gb|ATBY01000017.1| 226045 225023 -1 - 1023 FIG00543916: hypothetical protein - none -
fig|6666666.67496.peg.209 CDS gi|512068193|gb|ATBY01000017.1| 229992 226060 -3 - 3933 FtsK/SpoIIIE family protein - none -
fig|6666666.67496.peg.210 CDS gi|512068193|gb|ATBY01000017.1| 230410 230189 -1 - 222 hypothetical protein - none -
fig|6666666.67496.peg.211 CDS gi|512068193|gb|ATBY01000017.1| 230387 231805 2 + 1419 integral membrane protein - none -
fig|6666666.67496.peg.212 CDS gi|512068193|gb|ATBY01000017.1| 231802 233070 1 + 1269 subtilase family protein - none -
fig|6666666.67496.peg.213 CDS gi|512068193|gb|ATBY01000017.1| 234373 233030 -1 - 1344 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67496.peg.214 CDS gi|512068193|gb|ATBY01000017.1| 236922 234538 -3 - 2385 FIG00546597: hypothetical protein - none -
fig|6666666.67496.peg.215 CDS gi|512068193|gb|ATBY01000017.1| 237912 237046 -3 - 867 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67496.peg.216 CDS gi|512068193|gb|ATBY01000017.1| 238149 237943 -3 - 207 hypothetical protein - none -
fig|6666666.67496.peg.217 CDS gi|512068193|gb|ATBY01000017.1| 238540 238325 -1 - 216 hypothetical protein - none -
fig|6666666.67496.peg.218 CDS gi|512068193|gb|ATBY01000017.1| 238724 239329 2 + 606 hypothetical protein - none -
fig|6666666.67496.peg.219 CDS gi|512068193|gb|ATBY01000017.1| 239717 239932 2 + 216 hypothetical protein - none -
fig|6666666.67496.peg.220 CDS gi|512068193|gb|ATBY01000017.1| 240101 240214 2 + 114 hypothetical protein - none -
fig|6666666.67496.peg.221 CDS gi|512068193|gb|ATBY01000017.1| 240922 240368 -1 - 555 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67496.peg.222 CDS gi|512068193|gb|ATBY01000017.1| 242021 240999 -2 - 1023 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67496.peg.223 CDS gi|512068193|gb|ATBY01000017.1| 242715 242110 -3 - 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.67496.peg.224 CDS gi|512068193|gb|ATBY01000017.1| 243138 242737 -3 - 402 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.67496.peg.225 CDS gi|512068193|gb|ATBY01000017.1| 243510 243142 -3 - 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.67496.peg.226 CDS gi|512068193|gb|ATBY01000017.1| 243619 243741 1 + 123 hypothetical protein - none -
fig|6666666.67496.peg.227 CDS gi|512068193|gb|ATBY01000017.1| 243985 243755 -1 - 231 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67496.peg.228 CDS gi|512068193|gb|ATBY01000017.1| 248652 244213 -3 - 4440 Activator of (R)-2-hydroxyglutaryl-CoA dehydratase - none -
fig|6666666.67496.peg.229 CDS gi|512068193|gb|ATBY01000017.1| 248920 249510 1 + 591 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.230 CDS gi|512068193|gb|ATBY01000017.1| 250457 249657 -2 - 801 Putative secreted protein - none -
fig|6666666.67496.peg.231 CDS gi|512068193|gb|ATBY01000017.1| 251393 250599 -2 - 795 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67496.peg.232 CDS gi|512068193|gb|ATBY01000017.1| 251653 252384 1 + 732 UPF0246 protein YaaA - none -
fig|6666666.67496.peg.233 CDS gi|512068193|gb|ATBY01000017.1| 252978 252433 -3 - 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67496.peg.234 CDS gi|512068193|gb|ATBY01000017.1| 254297 252975 -2 - 1323 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67496.peg.235 CDS gi|512068193|gb|ATBY01000017.1| 255372 254869 -3 - 504 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67496.peg.236 CDS gi|512068193|gb|ATBY01000017.1| 255565 255380 -1 - 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67496.peg.237 CDS gi|512068193|gb|ATBY01000017.1| 256192 255569 -1 - 624 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.67496.peg.238 CDS gi|512068193|gb|ATBY01000017.1| 256625 256224 -2 - 402 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67496.peg.239 CDS gi|512068193|gb|ATBY01000017.1| 257161 256625 -1 - 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67496.peg.240 CDS gi|512068193|gb|ATBY01000017.1| 257578 257180 -1 - 399 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.67496.peg.241 CDS gi|512068193|gb|ATBY01000017.1| 258046 257930 -1 - 117 hypothetical protein - none -
fig|6666666.67496.peg.242 CDS gi|512068193|gb|ATBY01000017.1| 258358 258630 1 + 273 FIG00544084: hypothetical protein - none -
fig|6666666.67496.peg.243 CDS gi|512068193|gb|ATBY01000017.1| 258740 261049 2 + 2310 Putative formate dehydrogenase oxidoreductase protein Formate hydrogenase
fig|6666666.67496.peg.244 CDS gi|512068193|gb|ATBY01000017.1| 261056 261958 2 + 903 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67496.peg.245 CDS gi|512068193|gb|ATBY01000017.1| 262266 262784 3 + 519 hypothetical protein - none -
fig|6666666.67496.peg.246 CDS gi|512068193|gb|ATBY01000017.1| 263516 264499 2 + 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67496.peg.247 CDS gi|512068193|gb|ATBY01000017.1| 264500 265573 2 + 1074 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67496.peg.248 CDS gi|512068193|gb|ATBY01000017.1| 265573 267624 1 + 2052 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67496.peg.249 CDS gi|512068193|gb|ATBY01000017.1| 267679 269385 1 + 1707 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67496.peg.250 CDS gi|512068193|gb|ATBY01000017.1| 269670 271376 3 + 1707 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67496.peg.251 CDS gi|512068193|gb|ATBY01000017.1| 272113 271529 -1 - 585 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67496.peg.252 CDS gi|512068193|gb|ATBY01000017.1| 272430 272116 -3 - 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67496.peg.253 CDS gi|512068193|gb|ATBY01000017.1| 272802 272434 -3 - 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67496.peg.254 CDS gi|512068193|gb|ATBY01000017.1| 273529 272981 -1 - 549 FIG00546173: hypothetical protein - none -
fig|6666666.67496.peg.255 CDS gi|512068193|gb|ATBY01000017.1| 273707 275401 2 + 1695 putative ABC transporter - none -
fig|6666666.67496.peg.256 CDS gi|512068193|gb|ATBY01000017.1| 275402 276985 2 + 1584 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.67496.peg.257 CDS gi|512068193|gb|ATBY01000017.1| 277597 277247 -1 - 351 hypothetical protein - none -
fig|6666666.67496.peg.258 CDS gi|512068193|gb|ATBY01000017.1| 278996 277650 -2 - 1347 FIG00545970: hypothetical protein - none -
fig|6666666.67496.peg.259 CDS gi|512068193|gb|ATBY01000017.1| 280286 279348 -2 - 939 hypothetical protein - none -
fig|6666666.67496.peg.260 CDS gi|512068193|gb|ATBY01000017.1| 281659 280442 -1 - 1218 hypothetical protein - none -
fig|6666666.67496.peg.261 CDS gi|512068193|gb|ATBY01000017.1| 282165 281731 -3 - 435 hypothetical protein - none -
fig|6666666.67496.peg.262 CDS gi|512068193|gb|ATBY01000017.1| 282682 282410 -1 - 273 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.67496.peg.263 CDS gi|512068193|gb|ATBY01000017.1| 282915 282685 -3 - 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67496.peg.264 CDS gi|512068193|gb|ATBY01000017.1| 283331 282915 -2 - 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67496.peg.265 CDS gi|512068193|gb|ATBY01000017.1| 284090 283338 -2 - 753 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.67496.peg.266 CDS gi|512068193|gb|ATBY01000017.1| 284452 284090 -1 - 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67496.peg.267 CDS gi|512068193|gb|ATBY01000017.1| 284732 284457 -2 - 276 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.67496.peg.268 CDS gi|512068193|gb|ATBY01000017.1| 285591 284749 -3 - 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67496.peg.269 CDS gi|512068193|gb|ATBY01000017.1| 285937 285635 -1 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67496.peg.270 CDS gi|512068193|gb|ATBY01000017.1| 286618 285938 -1 - 681 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67496.peg.271 CDS gi|512068193|gb|ATBY01000017.1| 287271 286621 -3 - 651 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67496.peg.272 CDS gi|512068193|gb|ATBY01000017.1| 287610 287305 -3 - 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.67496.peg.273 CDS gi|512068193|gb|ATBY01000017.1| 288149 288652 2 + 504 Alkaline shock protein 23 - none -
fig|6666666.67496.peg.274 CDS gi|512068193|gb|ATBY01000017.1| 288665 288949 2 + 285 FIG00545243: hypothetical protein - none -
fig|6666666.67496.peg.275 CDS gi|512068193|gb|ATBY01000017.1| 288983 289174 2 + 192 hypothetical protein - none -
fig|6666666.67496.peg.276 CDS gi|512068193|gb|ATBY01000017.1| 289178 290224 2 + 1047 FIG00546590: hypothetical protein - none -
fig|6666666.67496.peg.277 CDS gi|512068193|gb|ATBY01000017.1| 290196 290765 3 + 570 FIG00546262: hypothetical protein - none -
fig|6666666.67496.peg.278 CDS gi|512068193|gb|ATBY01000017.1| 290766 291332 3 + 567 FIG00544560: hypothetical protein - none -
fig|6666666.67496.peg.279 CDS gi|512068193|gb|ATBY01000017.1| 292362 291592 -3 - 771 membrane protein, putative - none -
fig|6666666.67496.peg.280 CDS gi|512068193|gb|ATBY01000017.1| 293847 292657 -3 - 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.67496.peg.281 CDS gi|512068193|gb|ATBY01000017.1| 296289 294166 -3 - 2124 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.67496.peg.282 CDS gi|512068193|gb|ATBY01000017.1| 296281 296433 1 + 153 hypothetical protein - none -
fig|6666666.67496.peg.283 CDS gi|512068193|gb|ATBY01000017.1| 296924 296457 -2 - 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67496.peg.284 CDS gi|512068193|gb|ATBY01000017.1| 297302 296931 -2 - 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67496.peg.285 CDS gi|512068193|gb|ATBY01000017.1| 298892 297573 -2 - 1320 FIG00547666: hypothetical protein - none -
fig|6666666.67496.peg.286 CDS gi|512068193|gb|ATBY01000017.1| 299037 299594 3 + 558 hypothetical protein - none -
fig|6666666.67496.peg.287 CDS gi|512068193|gb|ATBY01000017.1| 300217 299774 -1 - 444 hypothetical protein - none -
fig|6666666.67496.peg.288 CDS gi|512068193|gb|ATBY01000017.1| 304334 300321 -2 - 4014 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67496.peg.289 CDS gi|512068193|gb|ATBY01000017.1| 307897 304430 -1 - 3468 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67496.peg.290 CDS gi|512068193|gb|ATBY01000017.1| 309030 308113 -3 - 918 FIG00545886: hypothetical protein - none -
fig|6666666.67496.peg.291 CDS gi|512068193|gb|ATBY01000017.1| 309679 309293 -1 - 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67496.peg.292 CDS gi|512068193|gb|ATBY01000017.1| 310281 309772 -3 - 510 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67496.peg.293 CDS gi|512068193|gb|ATBY01000017.1| 311093 310551 -2 - 543 hypothetical protein - none -
fig|6666666.67496.peg.294 CDS gi|512068193|gb|ATBY01000017.1| 312341 311100 -2 - 1242 hypothetical protein - none -
fig|6666666.67496.peg.295 CDS gi|512068193|gb|ATBY01000017.1| 312333 312467 3 + 135 hypothetical protein - none -
fig|6666666.67496.peg.296 CDS gi|512068193|gb|ATBY01000017.1| 313621 312911 -1 - 711 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67496.peg.297 CDS gi|512068193|gb|ATBY01000017.1| 314209 313775 -1 - 435 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67496.peg.298 CDS gi|512068193|gb|ATBY01000017.1| 315177 314365 -3 - 813 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67496.peg.299 CDS gi|512068193|gb|ATBY01000017.1| 315576 315268 -3 - 309 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67496.peg.300 CDS gi|512068193|gb|ATBY01000017.1| 317513 316530 -2 - 984 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoinds for Quinones
fig|6666666.67496.peg.301 CDS gi|512068193|gb|ATBY01000017.1| 317648 318805 2 + 1158 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67496.peg.302 CDS gi|512068193|gb|ATBY01000017.1| 319569 318883 -3 - 687 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67496.peg.303 CDS gi|512068193|gb|ATBY01000017.1| 320791 319595 -1 - 1197 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67496.peg.304 CDS gi|512068193|gb|ATBY01000017.1| 321240 320842 -3 - 399 FIG00543979: hypothetical protein - none -
fig|6666666.67496.peg.305 CDS gi|512068193|gb|ATBY01000017.1| 322796 321249 -2 - 1548 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67496.peg.306 CDS gi|512068193|gb|ATBY01000017.1| 323719 322793 -1 - 927 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67496.peg.307 CDS gi|512068193|gb|ATBY01000017.1| 324013 324894 1 + 882 hypothetical protein - none -
fig|6666666.67496.peg.308 CDS gi|512068193|gb|ATBY01000017.1| 324952 325827 1 + 876 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67496.peg.309 CDS gi|512068193|gb|ATBY01000017.1| 325827 326966 3 + 1140 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67496.peg.310 CDS gi|512068193|gb|ATBY01000017.1| 327800 326937 -2 - 864 FIG00544751: hypothetical protein - none -
fig|6666666.67496.peg.311 CDS gi|512068193|gb|ATBY01000017.1| 327930 328736 3 + 807 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67496.peg.312 CDS gi|512068193|gb|ATBY01000017.1| 329184 328876 -3 - 309 FIG00545743: hypothetical protein - none -
fig|6666666.67496.peg.313 CDS gi|512068193|gb|ATBY01000017.1| 329239 329496 1 + 258 FIG00544106: hypothetical protein - none -
fig|6666666.67496.peg.314 CDS gi|512068193|gb|ATBY01000017.1| 330365 329493 -2 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67496.peg.315 CDS gi|512068193|gb|ATBY01000017.1| 331064 330366 -2 - 699 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67496.peg.316 CDS gi|512068193|gb|ATBY01000017.1| 331160 332356 2 + 1197 Manganese transport protein MntH - none -
fig|6666666.67496.peg.317 CDS gi|512068193|gb|ATBY01000017.1| 333333 332353 -3 - 981 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67496.peg.318 CDS gi|512068193|gb|ATBY01000017.1| 333641 333330 -2 - 312 Quaternary ammonium compound-resistance protein SugE - none -
fig|6666666.67496.peg.319 CDS gi|512068193|gb|ATBY01000017.1| 334643 333711 -2 - 933 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67496.peg.320 CDS gi|512068193|gb|ATBY01000017.1| 336208 334655 -1 - 1554 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67496.peg.321 CDS gi|512068193|gb|ATBY01000017.1| 336979 336209 -1 - 771 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67496.peg.322 CDS gi|512068193|gb|ATBY01000017.1| 337583 336981 -2 - 603 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67496.peg.323 CDS gi|512068193|gb|ATBY01000017.1| 338185 337580 -1 - 606 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.67496.peg.324 CDS gi|512068193|gb|ATBY01000017.1| 339550 338225 -1 - 1326 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.325 CDS gi|512068193|gb|ATBY01000017.1| 339612 341048 3 + 1437 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67496.peg.326 CDS gi|512068193|gb|ATBY01000017.1| 342425 341025 -2 - 1401 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.327 CDS gi|512068193|gb|ATBY01000017.1| 343615 342560 -1 - 1056 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.328 CDS gi|512068193|gb|ATBY01000017.1| 346228 343631 -1 - 2598 FUPA26 P-type ATPase - none -
fig|6666666.67496.peg.329 CDS gi|512068193|gb|ATBY01000017.1| 346691 346215 -2 - 477 TerC family integral membrane protein - none -
fig|6666666.67496.peg.330 CDS gi|512068193|gb|ATBY01000017.1| 347215 346694 -1 - 522 FIG00543961: hypothetical protein - none -
fig|6666666.67496.peg.331 CDS gi|512068193|gb|ATBY01000017.1| 348147 347212 -3 - 936 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.332 CDS gi|512068193|gb|ATBY01000017.1| 349900 348197 -1 - 1704 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.333 CDS gi|512068193|gb|ATBY01000017.1| 351404 350532 -2 - 873 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.334 CDS gi|512068193|gb|ATBY01000017.1| 352714 351401 -1 - 1314 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.335 CDS gi|512068193|gb|ATBY01000017.1| 352964 352746 -2 - 219 Glutaredoxin-like domain protein - none -
fig|6666666.67496.peg.336 CDS gi|512068193|gb|ATBY01000017.1| 353111 354145 2 + 1035 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67496.peg.337 CDS gi|512068193|gb|ATBY01000017.1| 354648 354457 -3 - 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67496.peg.338 CDS gi|512068193|gb|ATBY01000017.1| 355561 354788 -1 - 774 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67496.peg.339 CDS gi|512068193|gb|ATBY01000017.1| 356599 355565 -1 - 1035 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.67496.peg.340 CDS gi|512068193|gb|ATBY01000017.1| 357495 356596 -3 - 900 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67496.peg.341 CDS gi|512068193|gb|ATBY01000017.1| 357573 358382 3 + 810 FIG00543972: hypothetical protein - none -
fig|6666666.67496.peg.342 CDS gi|512068193|gb|ATBY01000017.1| 359229 358546 -3 - 684 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67496.peg.343 CDS gi|512068193|gb|ATBY01000017.1| 360482 359238 -2 - 1245 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67496.peg.344 CDS gi|512068193|gb|ATBY01000017.1| 361232 360486 -2 - 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67496.peg.345 CDS gi|512068193|gb|ATBY01000017.1| 362537 361254 -2 - 1284 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67496.peg.346 CDS gi|512068193|gb|ATBY01000017.1| 362678 364396 2 + 1719 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.67496.peg.347 CDS gi|512068193|gb|ATBY01000017.1| 364644 365612 3 + 969 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.67496.peg.348 CDS gi|512068193|gb|ATBY01000017.1| 366731 365688 -2 - 1044 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67496.peg.349 CDS gi|512068193|gb|ATBY01000017.1| 366756 367247 3 + 492 FIG00546961: hypothetical protein - none -
fig|6666666.67496.peg.350 CDS gi|512068193|gb|ATBY01000017.1| 367247 368011 2 + 765 FIG00544979: hypothetical protein - none -
fig|6666666.67496.peg.351 CDS gi|512068193|gb|ATBY01000017.1| 368351 367998 -2 - 354 FIG01282775: hypothetical protein - none -
fig|6666666.67496.peg.352 CDS gi|512068193|gb|ATBY01000017.1| 368396 368944 2 + 549 hypothetical protein - none -
fig|6666666.67496.peg.353 CDS gi|512068193|gb|ATBY01000017.1| 369354 369073 -3 - 282 FIG00544701: hypothetical protein - none -
fig|6666666.67496.peg.354 CDS gi|512068193|gb|ATBY01000017.1| 369508 369359 -1 - 150 hypothetical protein - none -
fig|6666666.67496.peg.355 CDS gi|512068193|gb|ATBY01000017.1| 370807 369515 -1 - 1293 FIG00544632: hypothetical protein - none -
fig|6666666.67496.peg.356 CDS gi|512068193|gb|ATBY01000017.1| 371295 370906 -3 - 390 FIG01282797: hypothetical protein - none -
fig|6666666.67496.peg.357 CDS gi|512068193|gb|ATBY01000017.1| 372097 371342 -1 - 756 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67496.peg.358 CDS gi|512068193|gb|ATBY01000017.1| 374163 372097 -3 - 2067 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67496.peg.359 CDS gi|512068193|gb|ATBY01000017.1| 374937 374182 -3 - 756 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67496.peg.360 CDS gi|512068193|gb|ATBY01000017.1| 375283 375146 -1 - 138 hypothetical protein - none -
fig|6666666.67496.peg.361 CDS gi|512068193|gb|ATBY01000017.1| 376972 375563 -1 - 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.67496.peg.362 CDS gi|512068193|gb|ATBY01000017.1| 377538 377413 -3 - 126 hypothetical protein - none -
fig|6666666.67496.peg.363 CDS gi|512068193|gb|ATBY01000017.1| 377856 379160 3 + 1305 surface layer protein A - none -
fig|6666666.67496.peg.364 CDS gi|512068193|gb|ATBY01000017.1| 379289 380446 2 + 1158 FIG00548211: hypothetical protein - none -
fig|6666666.67496.peg.365 CDS gi|512068193|gb|ATBY01000017.1| 380628 381437 3 + 810 FIG00546606: hypothetical protein - none -
fig|6666666.67496.peg.366 CDS gi|512068193|gb|ATBY01000017.1| 381459 382151 3 + 693 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67496.peg.367 CDS gi|512068193|gb|ATBY01000017.1| 382148 382492 2 + 345 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67496.peg.368 CDS gi|512068193|gb|ATBY01000017.1| 382567 383211 1 + 645 putative acyltransferase - none -
fig|6666666.67496.peg.369 CDS gi|512068193|gb|ATBY01000017.1| 383250 384044 3 + 795 Putative secreted protein - none -
fig|6666666.67496.peg.370 CDS gi|512068193|gb|ATBY01000017.1| 385187 384261 -2 - 927 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67496.peg.371 CDS gi|512068193|gb|ATBY01000017.1| 385254 386645 3 + 1392 putative transmembrane efflux protein - none -
fig|6666666.67496.peg.372 CDS gi|512068193|gb|ATBY01000017.1| 386761 386642 -1 - 120 hypothetical protein - none -
fig|6666666.67496.peg.373 CDS gi|512068193|gb|ATBY01000017.1| 387222 386740 -3 - 483 hypothetical protein - none -
fig|6666666.67496.peg.374 CDS gi|512068193|gb|ATBY01000017.1| 388074 387448 -3 - 627 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.67496.peg.375 CDS gi|512068193|gb|ATBY01000017.1| 389159 388074 -2 - 1086 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.67496.peg.376 CDS gi|512068193|gb|ATBY01000017.1| 391151 389196 -2 - 1956 FIG00546273: hypothetical protein - none -
fig|6666666.67496.peg.377 CDS gi|512068193|gb|ATBY01000017.1| 391224 391577 3 + 354 hypothetical protein - none -
fig|6666666.67496.peg.378 CDS gi|512068193|gb|ATBY01000017.1| 391587 392183 3 + 597 uncharacterized membrane-associated protein - none -
fig|6666666.67496.peg.379 CDS gi|512068193|gb|ATBY01000017.1| 392835 392278 -3 - 558 hypothetical protein - none -
fig|6666666.67496.peg.380 CDS gi|512068193|gb|ATBY01000017.1| 394332 393184 -3 - 1149 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67496.peg.381 CDS gi|512068193|gb|ATBY01000017.1| 394367 395785 2 + 1419 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67496.peg.382 CDS gi|512068193|gb|ATBY01000017.1| 398783 395922 -2 - 2862 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67496.peg.383 CDS gi|512068193|gb|ATBY01000017.1| 399132 398929 -3 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67496.peg.384 CDS gi|512068193|gb|ATBY01000017.1| 399165 401387 3 + 2223 FIG00545284: hypothetical protein - none -
fig|6666666.67496.peg.385 CDS gi|512068193|gb|ATBY01000017.1| 402330 401398 -3 - 933 hypothetical protein - none -
fig|6666666.67496.peg.386 CDS gi|512068193|gb|ATBY01000017.1| 403217 402456 -2 - 762 hypothetical protein - none -
fig|6666666.67496.peg.387 CDS gi|512068193|gb|ATBY01000017.1| 406442 403248 -2 - 3195 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.67496.peg.388 CDS gi|512068193|gb|ATBY01000017.1| 407251 406760 -1 - 492 Heat shock protein Hsp20 - none -
fig|6666666.67496.peg.389 CDS gi|512068193|gb|ATBY01000017.1| 408054 407752 -3 - 303 Putative secreted protein - none -
fig|6666666.67496.peg.390 CDS gi|512068193|gb|ATBY01000017.1| 408239 408057 -2 - 183 hypothetical protein - none -
fig|6666666.67496.peg.391 CDS gi|512068193|gb|ATBY01000017.1| 409522 408881 -1 - 642 hypothetical protein - none -
fig|6666666.67496.peg.392 CDS gi|512068193|gb|ATBY01000017.1| 410619 409504 -3 - 1116 Flp pilus assembly protein, ATPase CpaF - none -
fig|6666666.67496.peg.393 CDS gi|512068193|gb|ATBY01000017.1| 411631 410612 -1 - 1020 FIG01282753: hypothetical protein - none -
fig|6666666.67496.peg.394 CDS gi|512068193|gb|ATBY01000017.1| 411936 411628 -3 - 309 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67496.peg.395 CDS gi|512068193|gb|ATBY01000017.1| 412366 411959 -1 - 408 FIG00543988: hypothetical protein - none -
fig|6666666.67496.peg.396 CDS gi|512068193|gb|ATBY01000017.1| 413596 412382 -1 - 1215 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67496.peg.397 CDS gi|512068193|gb|ATBY01000017.1| 414470 413613 -2 - 858 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67496.peg.398 CDS gi|512068193|gb|ATBY01000017.1| 414529 415581 1 + 1053 FIG00545923: hypothetical protein - none -
fig|6666666.67496.peg.399 CDS gi|512068193|gb|ATBY01000017.1| 415593 416672 3 + 1080 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.400 CDS gi|512068193|gb|ATBY01000017.1| 417016 416669 -1 - 348 FIG00543853: hypothetical protein - none -
fig|6666666.67496.peg.401 CDS gi|512068193|gb|ATBY01000017.1| 417569 417036 -2 - 534 Phospholipid-binding protein - none -
fig|6666666.67496.peg.402 CDS gi|512068193|gb|ATBY01000017.1| 419396 417591 -2 - 1806 ABC transporter TetB - none -
fig|6666666.67496.peg.403 CDS gi|512068193|gb|ATBY01000017.1| 420815 419397 -2 - 1419 FIG00544414: hypothetical protein - none -
fig|6666666.67496.peg.404 CDS gi|512068193|gb|ATBY01000017.1| 420835 420987 1 + 153 hypothetical protein - none -
fig|6666666.67496.peg.405 CDS gi|512068193|gb|ATBY01000017.1| 421143 421997 3 + 855 23S rRNA N-6-methyltransferase ErmCX RNA methylation
fig|6666666.67496.peg.406 CDS gi|512068193|gb|ATBY01000017.1| 422371 422213 -1 - 159 hypothetical protein - none -
fig|6666666.67496.peg.407 CDS gi|512068193|gb|ATBY01000017.1| 423604 423035 -1 - 570 FIG00544328: hypothetical protein - none -
fig|6666666.67496.peg.408 CDS gi|512068193|gb|ATBY01000017.1| 423755 424258 2 + 504 FIG00544230: hypothetical protein - none -
fig|6666666.67496.peg.409 CDS gi|512068193|gb|ATBY01000017.1| 424410 424640 3 + 231 hypothetical protein - none -
fig|6666666.67496.peg.410 CDS gi|512068193|gb|ATBY01000017.1| 425464 424664 -1 - 801 hypothetical protein - none -
fig|6666666.67496.peg.411 CDS gi|512068193|gb|ATBY01000017.1| 426729 425551 -3 - 1179 putative serine protease - none -
fig|6666666.67496.peg.412 CDS gi|512068193|gb|ATBY01000017.1| 427405 426743 -1 - 663 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67496.peg.413 CDS gi|512068193|gb|ATBY01000017.1| 427920 427402 -3 - 519 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.67496.peg.414 CDS gi|512068193|gb|ATBY01000017.1| 428534 427917 -2 - 618 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67496.peg.415 CDS gi|512068193|gb|ATBY01000017.1| 428751 429434 3 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67496.peg.416 CDS gi|512068193|gb|ATBY01000017.1| 429560 429715 2 + 156 hypothetical protein - none -
fig|6666666.67496.peg.417 CDS gi|512068193|gb|ATBY01000017.1| 430600 429797 -1 - 804 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67496.peg.418 CDS gi|512068193|gb|ATBY01000017.1| 431035 430610 -1 - 426 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67496.peg.419 CDS gi|512068193|gb|ATBY01000017.1| 431196 431038 -3 - 159 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67496.peg.420 CDS gi|512068193|gb|ATBY01000017.1| 431773 431429 -1 - 345 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67496.peg.421 CDS gi|512068193|gb|ATBY01000017.1| 431907 434276 3 + 2370 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67496.peg.422 CDS gi|512068193|gb|ATBY01000017.1| 434702 434259 -2 - 444 Transamidase GatB domain protein - none -
fig|6666666.67496.peg.423 CDS gi|512068193|gb|ATBY01000017.1| 434727 435566 3 + 840 putative secreted protein - none -
fig|6666666.67496.peg.424 CDS gi|512068193|gb|ATBY01000017.1| 436577 435735 -2 - 843 hypothetical protein - none -
fig|6666666.67496.peg.425 CDS gi|512068193|gb|ATBY01000017.1| 438216 436879 -3 - 1338 FIG00544507: hypothetical protein - none -
fig|6666666.67496.peg.426 CDS gi|512068193|gb|ATBY01000017.1| 438331 438840 1 + 510 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.67496.peg.427 CDS gi|512068193|gb|ATBY01000017.1| 439868 438837 -2 - 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67496.peg.428 CDS gi|512068193|gb|ATBY01000017.1| 446123 439944 -2 - 6180 hypothetical protein - none -
fig|6666666.67496.peg.429 CDS gi|512068193|gb|ATBY01000017.1| 446815 446120 -1 - 696 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67496.peg.430 CDS gi|512068193|gb|ATBY01000017.1| 447674 446772 -2 - 903 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67496.peg.431 CDS gi|512068193|gb|ATBY01000017.1| 449335 447755 -1 - 1581 Cell wall surface anchor family protein Sortase
fig|6666666.67496.peg.432 CDS gi|512068193|gb|ATBY01000017.1| 450958 449693 -1 - 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67496.peg.433 CDS gi|512068193|gb|ATBY01000017.1| 451035 451898 3 + 864 FIG00544278: hypothetical protein - none -
fig|6666666.67496.peg.434 CDS gi|512068193|gb|ATBY01000017.1| 452797 451895 -1 - 903 hypothetical protein - none -
fig|6666666.67496.peg.435 CDS gi|512068193|gb|ATBY01000017.1| 452990 454708 2 + 1719 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67496.peg.436 CDS gi|512068193|gb|ATBY01000017.1| 454727 455665 2 + 939 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.67496.peg.437 CDS gi|512068193|gb|ATBY01000017.1| 455662 456918 1 + 1257 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67496.peg.438 CDS gi|512068193|gb|ATBY01000017.1| 456915 457658 3 + 744 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67496.peg.439 CDS gi|512068193|gb|ATBY01000017.1| 458864 457725 -2 - 1140 No significant database matches - none -
fig|6666666.67496.peg.440 CDS gi|512068193|gb|ATBY01000017.1| 459624 459001 -3 - 624 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67496.peg.441 CDS gi|512068193|gb|ATBY01000017.1| 459953 459624 -2 - 330 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67496.peg.442 CDS gi|512068193|gb|ATBY01000017.1| 462053 459987 -2 - 2067 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67496.peg.443 CDS gi|512068193|gb|ATBY01000017.1| 462508 462125 -1 - 384 hypothetical protein - none -
fig|6666666.67496.peg.444 CDS gi|512068193|gb|ATBY01000017.1| 463572 462634 -3 - 939 glutamate transporter permease protein GluD - none -
fig|6666666.67496.peg.445 CDS gi|512068193|gb|ATBY01000017.1| 464254 463574 -1 - 681 glutamate ABC-type transporter, permease component - none -
fig|6666666.67496.peg.446 CDS gi|512068193|gb|ATBY01000017.1| 465136 464261 -1 - 876 glutamate-binding protein GluB - none -
fig|6666666.67496.peg.447 CDS gi|512068193|gb|ATBY01000017.1| 465897 465139 -3 - 759 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.67496.peg.448 CDS gi|512068193|gb|ATBY01000017.1| 467402 466158 -2 - 1245 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67496.peg.449 CDS gi|512068193|gb|ATBY01000017.1| 467799 467593 -3 - 207 hypothetical protein - none -
fig|6666666.67496.peg.450 CDS gi|512068193|gb|ATBY01000017.1| 468555 467887 -3 - 669 two-component system response regulator - none -
fig|6666666.67496.peg.451 CDS gi|512068193|gb|ATBY01000017.1| 469367 470065 2 + 699 ATP-binding protein of ABC transporter system - none -
fig|6666666.67496.peg.452 CDS gi|512068193|gb|ATBY01000017.1| 470065 471489 1 + 1425 hypothetical protein - none -
fig|6666666.67496.peg.453 CDS gi|512068193|gb|ATBY01000017.1| 472015 471878 -1 - 138 hypothetical protein - none -
fig|6666666.67496.peg.454 CDS gi|512068193|gb|ATBY01000017.1| 472086 472391 3 + 306 hypothetical protein - none -
fig|6666666.67496.peg.455 CDS gi|512068193|gb|ATBY01000017.1| 473701 472766 -1 - 936 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.456 CDS gi|512068193|gb|ATBY01000017.1| 473932 474930 1 + 999 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway
fig|6666666.67496.peg.457 CDS gi|512068193|gb|ATBY01000017.1| 474939 475781 3 + 843 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67496.peg.458 CDS gi|512068193|gb|ATBY01000017.1| 476647 475778 -1 - 870 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.459 CDS gi|512068193|gb|ATBY01000017.1| 478284 476890 -3 - 1395 hypothetical protein - none -
fig|6666666.67496.peg.460 CDS gi|512068193|gb|ATBY01000017.1| 481998 478798 -3 - 3201 hypothetical protein - none -
fig|6666666.67496.peg.461 CDS gi|512068193|gb|ATBY01000017.1| 487144 482585 -1 - 4560 hypothetical protein - none -
fig|6666666.67496.peg.462 CDS gi|512068193|gb|ATBY01000017.1| 488698 487475 -1 - 1224 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.463 CDS gi|512068193|gb|ATBY01000017.1| 491030 488682 -2 - 2349 putative membrane protein - none -
fig|6666666.67496.peg.464 CDS gi|512068193|gb|ATBY01000017.1| 491461 491255 -1 - 207 FIG00546156: hypothetical protein - none -
fig|6666666.67496.peg.465 CDS gi|512068193|gb|ATBY01000017.1| 491963 491520 -2 - 444 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67496.peg.466 CDS gi|512068193|gb|ATBY01000017.1| 492033 493010 3 + 978 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67496.peg.467 CDS gi|512068193|gb|ATBY01000017.1| 493742 493014 -2 - 729 hypothetical protein - none -
fig|6666666.67496.peg.468 CDS gi|512068193|gb|ATBY01000017.1| 494008 494976 1 + 969 Mobile element protein - none -
fig|6666666.67496.peg.469 CDS gi|512068193|gb|ATBY01000017.1| 495015 495206 3 + 192 hypothetical protein - none -
fig|6666666.67496.peg.470 CDS gi|512068193|gb|ATBY01000017.1| 495561 496526 3 + 966 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67496.peg.471 CDS gi|512068193|gb|ATBY01000017.1| 497254 497682 1 + 429 hypothetical protein - none -
fig|6666666.67496.peg.472 CDS gi|512068193|gb|ATBY01000017.1| 497869 498786 1 + 918 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67496.peg.473 CDS gi|512068193|gb|ATBY01000017.1| 500286 498787 -3 - 1500 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.67496.peg.474 CDS gi|512068193|gb|ATBY01000017.1| 500831 500286 -2 - 546 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67496.peg.475 CDS gi|512068193|gb|ATBY01000017.1| 501750 500938 -3 - 813 Hydroxyethylthiazole kinase (EC 2.7.1.50) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67496.peg.476 CDS gi|512068193|gb|ATBY01000017.1| 502025 503272 2 + 1248 hypothetical protein - none -
fig|6666666.67496.peg.477 CDS gi|512068193|gb|ATBY01000017.1| 504507 503326 -3 - 1182 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67496.peg.478 CDS gi|512068193|gb|ATBY01000017.1| 504575 505459 2 + 885 O-antigen export system permease protein RfbD - none -
fig|6666666.67496.peg.479 CDS gi|512068193|gb|ATBY01000017.1| 505663 506448 1 + 786 O-antigen export system, ATP-binding protein - none -
fig|6666666.67496.peg.480 CDS gi|512068193|gb|ATBY01000017.1| 506449 507636 1 + 1188 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67496.peg.481 CDS gi|512068193|gb|ATBY01000017.1| 508043 507633 -2 - 411 FIG00544442: hypothetical protein - none -
fig|6666666.67496.peg.482 CDS gi|512068193|gb|ATBY01000017.1| 508429 508067 -1 - 363 hypothetical protein - none -
fig|6666666.67496.peg.483 CDS gi|512068193|gb|ATBY01000017.1| 508764 508426 -3 - 339 hypothetical protein - none -
fig|6666666.67496.peg.484 CDS gi|512068193|gb|ATBY01000017.1| 508791 509033 3 + 243 FIG00543901: hypothetical protein - none -
fig|6666666.67496.peg.485 CDS gi|512068193|gb|ATBY01000017.1| 509184 509044 -3 - 141 hypothetical protein - none -
fig|6666666.67496.peg.486 CDS gi|512068193|gb|ATBY01000017.1| 509188 510489 1 + 1302 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67496.peg.487 CDS gi|512068193|gb|ATBY01000017.1| 510500 511252 2 + 753 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67496.peg.488 CDS gi|512068193|gb|ATBY01000017.1| 511255 513132 1 + 1878 putative membrane protein - none -
fig|6666666.67496.peg.489 CDS gi|512068193|gb|ATBY01000017.1| 513139 516363 1 + 3225 putative arabinosyltransferase - none -
fig|6666666.67496.peg.490 CDS gi|512068193|gb|ATBY01000017.1| 517471 516317 -1 - 1155 hypothetical protein - none -
fig|6666666.67496.peg.491 CDS gi|512068193|gb|ATBY01000017.1| 518514 517510 -3 - 1005 Putative hydrolase - none -
fig|6666666.67496.peg.492 CDS gi|512068193|gb|ATBY01000017.1| 519310 518546 -1 - 765 Putative membrane protein - none -
fig|6666666.67496.peg.493 CDS gi|512068193|gb|ATBY01000017.1| 519783 519361 -3 - 423 hypothetical protein - none -
fig|6666666.67496.peg.494 CDS gi|512068193|gb|ATBY01000017.1| 519849 521636 3 + 1788 Peptidase, M13 family - none -
fig|6666666.67496.peg.495 CDS gi|512068193|gb|ATBY01000017.1| 523161 521626 -3 - 1536 Predicted phosphohydrolase, Icc family - none -
fig|6666666.67496.peg.496 CDS gi|512068193|gb|ATBY01000017.1| 524769 523168 -3 - 1602 metallophosphoesterase - none -
fig|6666666.67496.peg.497 CDS gi|512068193|gb|ATBY01000017.1| 524994 526688 3 + 1695 Phosphodiesterase/alkaline phosphatase D - none -
fig|6666666.67496.peg.498 CDS gi|512068193|gb|ATBY01000017.1| 527413 526685 -1 - 729 hypothetical protein - none -
fig|6666666.67496.peg.499 CDS gi|512068193|gb|ATBY01000017.1| 527676 527413 -3 - 264 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67496.peg.500 CDS gi|512068193|gb|ATBY01000017.1| 527879 527730 -2 - 150 hypothetical protein - none -
fig|6666666.67496.peg.501 CDS gi|512068193|gb|ATBY01000017.1| 528584 527946 -2 - 639 Threonine efflux protein - none -
fig|6666666.67496.peg.502 CDS gi|512068193|gb|ATBY01000017.1| 529310 528591 -2 - 720 putative oxidoreductase - none -
fig|6666666.67496.peg.503 CDS gi|512068193|gb|ATBY01000017.1| 529935 529303 -3 - 633 Bll2902 protein - none -
fig|6666666.67496.peg.504 CDS gi|512068193|gb|ATBY01000017.1| 530533 530003 -1 - 531 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67496.peg.505 CDS gi|512068193|gb|ATBY01000017.1| 530720 531223 2 + 504 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67496.peg.506 CDS gi|512068193|gb|ATBY01000017.1| 531216 531884 3 + 669 ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.507 CDS gi|512068193|gb|ATBY01000017.1| 531877 534036 1 + 2160 hypothetical protein - none -
fig|6666666.67496.peg.508 CDS gi|512068193|gb|ATBY01000017.1| 534152 536305 2 + 2154 ATP-dependent helicase HrpB - none -
fig|6666666.67496.peg.509 CDS gi|512068193|gb|ATBY01000017.1| 537078 536311 -3 - 768 putative oxidoreductase - none -
fig|6666666.67496.peg.510 CDS gi|512068193|gb|ATBY01000017.1| 538724 537078 -2 - 1647 hypothetical protein - none -
fig|6666666.67496.peg.511 CDS gi|512068193|gb|ATBY01000017.1| 539699 538752 -2 - 948 Lysine decarboxylase family - none -
fig|6666666.67496.peg.512 CDS gi|512068193|gb|ATBY01000017.1| 539740 540435 1 + 696 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67496.peg.513 CDS gi|512068193|gb|ATBY01000017.1| 540446 541624 2 + 1179 hypothetical protein - none -
fig|6666666.67496.peg.514 CDS gi|512068193|gb|ATBY01000017.1| 541624 542109 1 + 486 hypothetical protein - none -
fig|6666666.67496.peg.515 CDS gi|512068193|gb|ATBY01000017.1| 542182 543408 1 + 1227 putative membrane protein - none -
fig|6666666.67496.peg.516 CDS gi|512068193|gb|ATBY01000017.1| 543936 543433 -3 - 504 carbonic anhydrase, family 3 - none -
fig|6666666.67496.peg.517 CDS gi|512068193|gb|ATBY01000017.1| 545243 543933 -2 - 1311 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.67496.peg.518 CDS gi|512068193|gb|ATBY01000017.1| 545543 545944 2 + 402 hypothetical protein - none -
fig|6666666.67496.peg.519 CDS gi|512068193|gb|ATBY01000017.1| 545986 546411 1 + 426 hypothetical protein - none -
fig|6666666.67496.peg.520 CDS gi|512068193|gb|ATBY01000017.1| 546637 546969 1 + 333 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) Sialic Acid Metabolism
fig|6666666.67496.peg.521 CDS gi|512068193|gb|ATBY01000017.1| 546977 547342 2 + 366 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) Sialic Acid Metabolism
fig|6666666.67496.peg.522 CDS gi|512068714|gb|ATBY01000016.1| 162 1649 3 + 1488 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - none -
fig|6666666.67496.peg.523 CDS gi|512068714|gb|ATBY01000016.1| 5287 1697 -1 - 3591 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67496.peg.524 CDS gi|512068714|gb|ATBY01000016.1| 6651 5464 -3 - 1188 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67496.peg.525 CDS gi|512068714|gb|ATBY01000016.1| 8249 6648 -2 - 1602 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67496.peg.526 CDS gi|512068714|gb|ATBY01000016.1| 11504 8325 -2 - 3180 Putative superfamily I DNA helicases - none -
fig|6666666.67496.peg.527 CDS gi|512068714|gb|ATBY01000016.1| 12581 11880 -2 - 702 hypothetical protein - none -
fig|6666666.67496.peg.528 CDS gi|512068714|gb|ATBY01000016.1| 14113 12761 -1 - 1353 D-serine dehydratase (EC 4.3.1.18) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67496.peg.529 CDS gi|512068714|gb|ATBY01000016.1| 15595 14153 -1 - 1443 D-serine permease DsdX Glycine and Serine Utilization
fig|6666666.67496.peg.530 CDS gi|512068714|gb|ATBY01000016.1| 16101 15958 -3 - 144 hypothetical protein - none -
fig|6666666.67496.peg.531 CDS gi|512068714|gb|ATBY01000016.1| 16892 17467 2 + 576 hypothetical protein - none -
fig|6666666.67496.peg.532 CDS gi|512068714|gb|ATBY01000016.1| 17809 17627 -1 - 183 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.67496.peg.533 CDS gi|512068714|gb|ATBY01000016.1| 18181 17897 -1 - 285 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.67496.peg.534 CDS gi|512068714|gb|ATBY01000016.1| 18209 19066 2 + 858 hypothetical protein - none -
fig|6666666.67496.peg.535 CDS gi|512068714|gb|ATBY01000016.1| 19131 19481 3 + 351 hypothetical protein - none -
fig|6666666.67496.peg.536 CDS gi|512068714|gb|ATBY01000016.1| 19676 20332 2 + 657 hypothetical protein - none -
fig|6666666.67496.peg.537 CDS gi|512068714|gb|ATBY01000016.1| 20417 20767 2 + 351 Sucrose-6-phosphate hydrolase (EC 3.2.1.26) Sucrose utilization
fig|6666666.67496.peg.538 CDS gi|512068714|gb|ATBY01000016.1| 20771 21073 2 + 303 hypothetical protein - none -
fig|6666666.67496.peg.539 CDS gi|512068714|gb|ATBY01000016.1| 21463 21846 1 + 384 hypothetical protein - none -
fig|6666666.67496.peg.540 CDS gi|512068714|gb|ATBY01000016.1| 22147 23322 1 + 1176 Xylose repressor XylR (ROK family) - none -
fig|6666666.67496.peg.541 CDS gi|512068714|gb|ATBY01000016.1| 23512 24858 1 + 1347 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.67496.peg.542 CDS gi|512068714|gb|ATBY01000016.1| 24877 26241 1 + 1365 D-xylose proton-symporter XylT Xylose utilization
fig|6666666.67496.peg.543 CDS gi|512068714|gb|ATBY01000016.1| 26273 27604 2 + 1332 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.67496.peg.544 CDS gi|512068714|gb|ATBY01000016.1| 29172 27820 -3 - 1353 D-serine dehydratase (EC 4.3.1.18) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67496.peg.545 CDS gi|512068714|gb|ATBY01000016.1| 30167 29586 -2 - 582 hypothetical protein - none -
fig|6666666.67496.peg.546 CDS gi|512068714|gb|ATBY01000016.1| 30798 30265 -3 - 534 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) - none -
fig|6666666.67496.peg.547 CDS gi|512068714|gb|ATBY01000016.1| 30826 31068 1 + 243 hypothetical protein - none -
fig|6666666.67496.peg.548 CDS gi|512068714|gb|ATBY01000016.1| 31135 31902 1 + 768 hypothetical protein - none -
fig|6666666.67496.peg.549 CDS gi|512068714|gb|ATBY01000016.1| 32719 32144 -1 - 576 hypothetical protein - none -
fig|6666666.67496.peg.550 CDS gi|512068714|gb|ATBY01000016.1| 33706 32840 -1 - 867 Fructokinase (EC 2.7.1.4) Fructose utilization;
Sucrose utilization
fig|6666666.67496.peg.551 CDS gi|512068714|gb|ATBY01000016.1| 33729 34913 3 + 1185 Sucrose-6-phosphate hydrolase (EC 3.2.1.26) Sucrose utilization
fig|6666666.67496.peg.552 CDS gi|512068714|gb|ATBY01000016.1| 35414 37411 2 + 1998 PTS system, sucrose-specific IIB component (EC 2.7.1.69) / PTS system, sucrose-specific IIC component (EC 2.7.1.69) / PTS system, sucrose-specific IIA component (EC 2.7.1.69) Sucrose utilization;
Sucrose utilization;
Sucrose utilization
fig|6666666.67496.peg.553 CDS gi|512068714|gb|ATBY01000016.1| 37422 38471 3 + 1050 TyrA protein - none -
fig|6666666.67496.peg.554 CDS gi|512068714|gb|ATBY01000016.1| 38801 40546 2 + 1746 hypothetical protein - none -
fig|6666666.67496.peg.555 CDS gi|512068714|gb|ATBY01000016.1| 42808 40616 -1 - 2193 High-affinity choline uptake protein BetT Niacin-Choline transport and metabolism
fig|6666666.67496.peg.556 CDS gi|512068714|gb|ATBY01000016.1| 43134 42928 -3 - 207 hypothetical protein - none -
fig|6666666.67496.peg.557 CDS gi|512068714|gb|ATBY01000016.1| 43114 43806 1 + 693 hypothetical protein - none -
fig|6666666.67496.peg.558 CDS gi|512068714|gb|ATBY01000016.1| 43806 43955 3 + 150 hypothetical protein - none -
fig|6666666.67496.peg.559 CDS gi|512068714|gb|ATBY01000016.1| 44046 44480 3 + 435 hypothetical protein - none -
fig|6666666.67496.peg.560 CDS gi|512068714|gb|ATBY01000016.1| 45311 44628 -2 - 684 ABC transporter membrane protein - none -
fig|6666666.67496.peg.561 CDS gi|512068714|gb|ATBY01000016.1| 46104 45301 -3 - 804 ABC transporter related - none -
fig|6666666.67496.peg.562 CDS gi|512068714|gb|ATBY01000016.1| 47537 46209 -2 - 1329 Gluconate permease D-gluconate and ketogluconates metabolism
fig|6666666.67496.peg.563 CDS gi|512068714|gb|ATBY01000016.1| 48445 47549 -1 - 897 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) - none -
fig|6666666.67496.peg.564 CDS gi|512068714|gb|ATBY01000016.1| 49862 48471 -2 - 1392 FIG00549167: hypothetical protein - none -
fig|6666666.67496.peg.565 CDS gi|512068714|gb|ATBY01000016.1| 50717 50001 -2 - 717 transcriptional regulator, GntR family - none -
fig|6666666.67496.peg.566 CDS gi|512068714|gb|ATBY01000016.1| 51264 50764 -3 - 501 hypothetical protein - none -
fig|6666666.67496.peg.567 CDS gi|512068714|gb|ATBY01000016.1| 52759 51410 -1 - 1350 Transporter - none -
fig|6666666.67496.peg.568 CDS gi|512068714|gb|ATBY01000016.1| 53127 54158 3 + 1032 L-idonate 5-dehydrogenase (EC 1.1.1.264) D-gluconate and ketogluconates metabolism
fig|6666666.67496.peg.569 CDS gi|512068714|gb|ATBY01000016.1| 54391 54155 -1 - 237 hypothetical protein - none -
fig|6666666.67496.peg.570 CDS gi|512068714|gb|ATBY01000016.1| 54831 54394 -3 - 438 hypothetical protein - none -
fig|6666666.67496.peg.571 CDS gi|512068714|gb|ATBY01000016.1| 55448 54891 -2 - 558 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67496.peg.572 CDS gi|512068714|gb|ATBY01000016.1| 55467 56267 3 + 801 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.67496.peg.573 CDS gi|512068714|gb|ATBY01000016.1| 56802 57323 3 + 522 hypothetical protein - none -
fig|6666666.67496.peg.574 CDS gi|512068714|gb|ATBY01000016.1| 58826 57480 -2 - 1347 Similar to tetracycline resistance protein - none -
fig|6666666.67496.peg.575 CDS gi|512068714|gb|ATBY01000016.1| 59540 58827 -2 - 714 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.67496.peg.576 CDS gi|512068714|gb|ATBY01000016.1| 60997 59543 -1 - 1455 Probable phosphomannomutase pmmB (EC 5.4.2.8) - none -
fig|6666666.67496.peg.577 CDS gi|512068714|gb|ATBY01000016.1| 61631 60984 -2 - 648 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67496.peg.578 CDS gi|512068714|gb|ATBY01000016.1| 61814 62809 2 + 996 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.67496.peg.579 CDS gi|512068714|gb|ATBY01000016.1| 62796 63011 3 + 216 hypothetical protein - none -
fig|6666666.67496.peg.580 CDS gi|512068714|gb|ATBY01000016.1| 63262 63041 -1 - 222 hypothetical protein - none -
fig|6666666.67496.peg.581 CDS gi|512068714|gb|ATBY01000016.1| 63308 63805 2 + 498 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.582 CDS gi|512068714|gb|ATBY01000016.1| 63789 64421 3 + 633 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.67496.peg.583 CDS gi|512068714|gb|ATBY01000016.1| 64567 65676 1 + 1110 No significant database matches - none -
fig|6666666.67496.peg.584 CDS gi|512068714|gb|ATBY01000016.1| 65828 65673 -2 - 156 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67496.peg.585 CDS gi|512068714|gb|ATBY01000016.1| 65827 65955 1 + 129 hypothetical protein - none -
fig|6666666.67496.peg.586 CDS gi|512068714|gb|ATBY01000016.1| 67804 65942 -1 - 1863 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.67496.peg.587 CDS gi|512068714|gb|ATBY01000016.1| 69092 67809 -2 - 1284 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67496.peg.588 CDS gi|512068714|gb|ATBY01000016.1| 70437 69085 -3 - 1353 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.589 CDS gi|512068714|gb|ATBY01000016.1| 71708 70434 -2 - 1275 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67496.peg.590 CDS gi|512068714|gb|ATBY01000016.1| 73010 71712 -2 - 1299 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67496.peg.591 CDS gi|512068714|gb|ATBY01000016.1| 73400 73011 -2 - 390 FIG00818182: hypothetical protein - none -
fig|6666666.67496.peg.592 CDS gi|512068714|gb|ATBY01000016.1| 74140 73439 -1 - 702 FIG00543872: hypothetical protein - none -
fig|6666666.67496.peg.593 CDS gi|512068714|gb|ATBY01000016.1| 75273 74431 -3 - 843 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) - none -
fig|6666666.67496.peg.594 CDS gi|512068714|gb|ATBY01000016.1| 75840 75412 -3 - 429 hypothetical protein - none -
fig|6666666.67496.peg.595 CDS gi|512068714|gb|ATBY01000016.1| 75962 76600 2 + 639 putative ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.596 CDS gi|512068714|gb|ATBY01000016.1| 76597 78663 1 + 2067 hypothetical protein - none -
fig|6666666.67496.peg.597 CDS gi|512068714|gb|ATBY01000016.1| 79950 78700 -3 - 1251 Ferrous iron transport peroxidase EfeB Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.67496.peg.598 CDS gi|512068714|gb|ATBY01000016.1| 81135 79951 -3 - 1185 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.67496.peg.599 CDS gi|512068714|gb|ATBY01000016.1| 82043 81132 -2 - 912 Ferrous iron transport permease EfeU Ferrous iron transporter EfeUOB, low-pH-induced
fig|6666666.67496.peg.600 CDS gi|512068714|gb|ATBY01000016.1| 83704 82412 -1 - 1293 FIG00549969: hypothetical protein - none -
fig|6666666.67496.peg.601 CDS gi|512068714|gb|ATBY01000016.1| 85343 83730 -2 - 1614 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.67496.peg.602 CDS gi|512068714|gb|ATBY01000016.1| 85527 86066 3 + 540 hypothetical protein - none -
fig|6666666.67496.peg.603 CDS gi|512068714|gb|ATBY01000016.1| 86795 86070 -2 - 726 FIG00546833: hypothetical protein - none -
fig|6666666.67496.peg.604 CDS gi|512068714|gb|ATBY01000016.1| 86981 86826 -2 - 156 hypothetical protein - none -
fig|6666666.67496.peg.605 CDS gi|512068714|gb|ATBY01000016.1| 87083 87205 2 + 123 hypothetical protein - none -
fig|6666666.67496.peg.606 CDS gi|512068714|gb|ATBY01000016.1| 87555 87214 -3 - 342 CRISPR-associated protein, Cas2 - none -
fig|6666666.67496.peg.607 CDS gi|512068714|gb|ATBY01000016.1| 88490 87552 -2 - 939 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.67496.peg.608 CDS gi|512068714|gb|ATBY01000016.1| 89156 88494 -2 - 663 CRISPR-associated protein, CT1974 - none -
fig|6666666.67496.peg.609 CDS gi|512068714|gb|ATBY01000016.1| 89773 89153 -1 - 621 CRISPR-associated protein, CT1976 - none -
fig|6666666.67496.peg.610 CDS gi|512068714|gb|ATBY01000016.1| 90283 89864 -1 - 420 CRISPR-associated protein, CT1975 family - none -
fig|6666666.67496.peg.611 CDS gi|512068965|gb|ATBY01000015.1| 3850 2654 -1 - 1197 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67496.peg.612 CDS gi|512068965|gb|ATBY01000015.1| 5221 3851 -1 - 1371 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67496.peg.613 CDS gi|512068965|gb|ATBY01000015.1| 5552 6922 2 + 1371 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) - none -
fig|6666666.67496.peg.614 CDS gi|512068965|gb|ATBY01000015.1| 7169 7621 2 + 453 hypothetical protein - none -
fig|6666666.67496.peg.615 CDS gi|512068965|gb|ATBY01000015.1| 7672 8118 1 + 447 ElaA protein cAMP signaling in bacteria
fig|6666666.67496.peg.616 CDS gi|512068965|gb|ATBY01000015.1| 9096 8119 -3 - 978 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67496.peg.617 CDS gi|512068965|gb|ATBY01000015.1| 9687 11237 3 + 1551 transporter - none -
fig|6666666.67496.peg.618 CDS gi|512068965|gb|ATBY01000015.1| 12672 11377 -3 - 1296 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67496.peg.619 CDS gi|512068965|gb|ATBY01000015.1| 12736 13590 1 + 855 FIG00545467: hypothetical protein - none -
fig|6666666.67496.peg.620 CDS gi|512068965|gb|ATBY01000015.1| 14585 13587 -2 - 999 FIG00545517: hypothetical protein - none -
fig|6666666.67496.peg.621 CDS gi|512068965|gb|ATBY01000015.1| 14577 14885 3 + 309 hypothetical protein - none -
fig|6666666.67496.peg.622 CDS gi|512068965|gb|ATBY01000015.1| 16262 15231 -2 - 1032 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67496.peg.623 CDS gi|512068965|gb|ATBY01000015.1| 17544 16348 -3 - 1197 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67496.peg.624 CDS gi|512068965|gb|ATBY01000015.1| 18187 17588 -1 - 600 probable RNA methyltransferase - none -
fig|6666666.67496.peg.625 CDS gi|512068965|gb|ATBY01000015.1| 18755 18222 -2 - 534 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.626 CDS gi|512068965|gb|ATBY01000015.1| 19483 18752 -1 - 732 Putative secreted protein - none -
fig|6666666.67496.peg.627 CDS gi|512068965|gb|ATBY01000015.1| 20255 19485 -2 - 771 Rhodanese-related sulfurtransferase - none -
fig|6666666.67496.peg.628 CDS gi|512068965|gb|ATBY01000015.1| 20621 21238 2 + 618 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.67496.peg.629 CDS gi|512068965|gb|ATBY01000015.1| 21235 21660 1 + 426 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.67496.peg.630 CDS gi|512068965|gb|ATBY01000015.1| 22303 21638 -1 - 666 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.631 CDS gi|512068965|gb|ATBY01000015.1| 25161 22603 -3 - 2559 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67496.peg.632 CDS gi|512068965|gb|ATBY01000015.1| 25364 26653 2 + 1290 FIG00547263: hypothetical protein - none -
fig|6666666.67496.peg.633 CDS gi|512068965|gb|ATBY01000015.1| 26666 27814 2 + 1149 Oxidoreductase FAD-binding domain protein - none -
fig|6666666.67496.peg.634 CDS gi|512068965|gb|ATBY01000015.1| 27867 28058 3 + 192 hypothetical protein - none -
fig|6666666.67496.peg.635 CDS gi|512068965|gb|ATBY01000015.1| 28835 28062 -2 - 774 Carbon-nitrogen hydrolase - none -
fig|6666666.67496.peg.636 CDS gi|512068965|gb|ATBY01000015.1| 28884 29549 3 + 666 hypothetical protein - none -
fig|6666666.67496.peg.637 CDS gi|512068965|gb|ATBY01000015.1| 30188 30484 2 + 297 hypothetical protein - none -
fig|6666666.67496.peg.638 CDS gi|512068965|gb|ATBY01000015.1| 31468 31070 -1 - 399 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67496.peg.639 CDS gi|512068965|gb|ATBY01000015.1| 32690 31524 -2 - 1167 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67496.peg.640 CDS gi|512068965|gb|ATBY01000015.1| 33429 32758 -3 - 672 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67496.peg.641 CDS gi|512068965|gb|ATBY01000015.1| 35279 33429 -2 - 1851 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67496.peg.642 CDS gi|512068965|gb|ATBY01000015.1| 35343 35501 3 + 159 hypothetical protein - none -
fig|6666666.67496.peg.643 CDS gi|512068965|gb|ATBY01000015.1| 36117 35542 -3 - 576 Uncharacterized protein conserved in bacteria - none -
fig|6666666.67496.peg.644 CDS gi|512068965|gb|ATBY01000015.1| 36284 37426 2 + 1143 putative membrane protein - none -
fig|6666666.67496.peg.645 CDS gi|512068965|gb|ATBY01000015.1| 37537 38922 1 + 1386 putative integral membrane protein - none -
fig|6666666.67496.peg.646 CDS gi|512068965|gb|ATBY01000015.1| 39135 39518 3 + 384 hypothetical protein - none -
fig|6666666.67496.peg.647 CDS gi|512068965|gb|ATBY01000015.1| 41152 39923 -1 - 1230 Plasmid maintenance system antidote protein - none -
fig|6666666.67496.peg.648 CDS gi|512068965|gb|ATBY01000015.1| 41522 41785 2 + 264 hypothetical protein - none -
fig|6666666.67496.peg.649 CDS gi|512068965|gb|ATBY01000015.1| 42501 41956 -3 - 546 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.650 CDS gi|512068965|gb|ATBY01000015.1| 43007 42507 -2 - 501 protein of unknown function DUF81 - none -
fig|6666666.67496.peg.651 CDS gi|512068965|gb|ATBY01000015.1| 43387 43004 -1 - 384 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.67496.peg.652 CDS gi|512068965|gb|ATBY01000015.1| 44342 43488 -2 - 855 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis
fig|6666666.67496.peg.653 CDS gi|512068965|gb|ATBY01000015.1| 44562 44335 -3 - 228 Ferredoxin-like protein involved in electron transfer - none -
fig|6666666.67496.peg.654 CDS gi|512068965|gb|ATBY01000015.1| 46223 44553 -2 - 1671 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) - none -
fig|6666666.67496.peg.655 CDS gi|512068965|gb|ATBY01000015.1| 46438 47265 1 + 828 FIG00548024: hypothetical protein - none -
fig|6666666.67496.peg.656 CDS gi|512068965|gb|ATBY01000015.1| 47262 48719 3 + 1458 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67496.peg.657 CDS gi|512068965|gb|ATBY01000015.1| 48725 49504 2 + 780 FIG00545006: hypothetical protein - none -
fig|6666666.67496.peg.658 CDS gi|512068965|gb|ATBY01000015.1| 49501 50169 1 + 669 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67496.peg.659 CDS gi|512068965|gb|ATBY01000015.1| 50163 51083 3 + 921 ABC transporter component, possibly Mn transport - none -
fig|6666666.67496.peg.660 CDS gi|512068965|gb|ATBY01000015.1| 51471 51151 -3 - 321 hypothetical protein - none -
fig|6666666.67496.peg.661 CDS gi|512068965|gb|ATBY01000015.1| 52190 51426 -2 - 765 hypothetical protein - none -
fig|6666666.67496.peg.662 CDS gi|512068965|gb|ATBY01000015.1| 54909 52249 -3 - 2661 hypothetical protein - none -
fig|6666666.67496.peg.663 CDS gi|512068965|gb|ATBY01000015.1| 55021 57525 1 + 2505 Fe-S oxidoreductase - none -
fig|6666666.67496.peg.664 CDS gi|512068965|gb|ATBY01000015.1| 57588 58076 3 + 489 hypothetical protein - none -
fig|6666666.67496.peg.665 CDS gi|512068965|gb|ATBY01000015.1| 58677 58093 -3 - 585 hypothetical protein - none -
fig|6666666.67496.peg.666 CDS gi|512068965|gb|ATBY01000015.1| 59010 58867 -3 - 144 hypothetical protein - none -
fig|6666666.67496.peg.667 CDS gi|512068965|gb|ATBY01000015.1| 59119 60342 1 + 1224 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67496.peg.668 CDS gi|512068965|gb|ATBY01000015.1| 60473 61873 2 + 1401 ATP-dependent DNA helicase recG - none -
fig|6666666.67496.peg.669 CDS gi|512068965|gb|ATBY01000015.1| 63560 61959 -2 - 1602 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67496.peg.670 CDS gi|512068965|gb|ATBY01000015.1| 64912 63572 -1 - 1341 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67496.peg.671 CDS gi|512068965|gb|ATBY01000015.1| 65510 64947 -2 - 564 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.67496.peg.672 CDS gi|512068965|gb|ATBY01000015.1| 65559 67175 3 + 1617 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67496.peg.673 CDS gi|512068965|gb|ATBY01000015.1| 68841 67450 -3 - 1392 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.67496.peg.674 CDS gi|512068965|gb|ATBY01000015.1| 69524 68838 -2 - 687 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.67496.peg.675 CDS gi|512068965|gb|ATBY01000015.1| 70116 69517 -3 - 600 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.67496.peg.676 CDS gi|512068965|gb|ATBY01000015.1| 71738 70152 -2 - 1587 ABC transporter, ATP-binding protein - none -
fig|6666666.67496.peg.677 CDS gi|512068965|gb|ATBY01000015.1| 73684 71897 -1 - 1788 ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.678 CDS gi|512068965|gb|ATBY01000015.1| 75347 73770 -2 - 1578 Site-specific recombinase - none -
fig|6666666.67496.peg.679 CDS gi|512068965|gb|ATBY01000015.1| 75490 75344 -1 - 147 putative site-specific recombinase - none -
fig|6666666.67496.peg.680 CDS gi|512068965|gb|ATBY01000015.1| 75990 77282 3 + 1293 FIG00545936: hypothetical protein - none -
fig|6666666.67496.peg.681 CDS gi|512068965|gb|ATBY01000015.1| 77315 77884 2 + 570 FIG00544365: hypothetical protein - none -
fig|6666666.67496.peg.682 CDS gi|512068965|gb|ATBY01000015.1| 77885 78457 2 + 573 FIG00546701: hypothetical protein - none -
fig|6666666.67496.peg.683 CDS gi|512068965|gb|ATBY01000015.1| 78671 79861 2 + 1191 hypothetical protein - none -
fig|6666666.67496.peg.684 CDS gi|512068965|gb|ATBY01000015.1| 80950 79856 -1 - 1095 probable aminotransferase - none -
fig|6666666.67496.peg.685 CDS gi|512068965|gb|ATBY01000015.1| 82213 80951 -1 - 1263 putative aminopeptidase - none -
fig|6666666.67496.peg.686 CDS gi|512068965|gb|ATBY01000015.1| 82465 84351 1 + 1887 Kup system potassium uptake protein Potassium homeostasis
fig|6666666.67496.peg.687 CDS gi|512068965|gb|ATBY01000015.1| 84966 84358 -3 - 609 Putative integral membrane protein - none -
fig|6666666.67496.peg.688 CDS gi|512068965|gb|ATBY01000015.1| 85310 84975 -2 - 336 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67496.peg.689 CDS gi|512068965|gb|ATBY01000015.1| 85459 85584 1 + 126 hypothetical protein - none -
fig|6666666.67496.peg.690 CDS gi|512068965|gb|ATBY01000015.1| 87614 85956 -2 - 1659 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67496.peg.691 CDS gi|512068965|gb|ATBY01000015.1| 88757 87615 -2 - 1143 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.67496.peg.692 CDS gi|512068965|gb|ATBY01000015.1| 88873 89070 1 + 198 FIG00543976: hypothetical protein - none -
fig|6666666.67496.peg.693 CDS gi|512068965|gb|ATBY01000015.1| 89126 91846 2 + 2721 Conserved putative integral membrane protein - none -
fig|6666666.67496.peg.694 CDS gi|512068965|gb|ATBY01000015.1| 92485 92210 -1 - 276 hypothetical protein - none -
fig|6666666.67496.peg.695 CDS gi|512068965|gb|ATBY01000015.1| 93869 92859 -2 - 1011 Lysophospholipid acyltransferase - none -
fig|6666666.67496.peg.696 CDS gi|512068965|gb|ATBY01000015.1| 93904 94542 1 + 639 hypothetical protein - none -
fig|6666666.67496.peg.697 CDS gi|512068965|gb|ATBY01000015.1| 94521 95771 3 + 1251 FIG00547077: hypothetical protein - none -
fig|6666666.67496.peg.698 CDS gi|512068965|gb|ATBY01000015.1| 95821 97035 1 + 1215 hypothetical protein - none -
fig|6666666.67496.peg.699 CDS gi|512068965|gb|ATBY01000015.1| 98079 97006 -3 - 1074 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67496.peg.700 CDS gi|512068965|gb|ATBY01000015.1| 98160 99110 3 + 951 putative metal-dependent membrane protease - none -
fig|6666666.67496.peg.701 CDS gi|512068965|gb|ATBY01000015.1| 99115 99837 1 + 723 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67496.peg.702 CDS gi|512068965|gb|ATBY01000015.1| 99897 100169 3 + 273 hypothetical protein - none -
fig|6666666.67496.peg.703 CDS gi|512068965|gb|ATBY01000015.1| 100639 101094 1 + 456 hypothetical protein - none -
fig|6666666.67496.peg.704 CDS gi|512068965|gb|ATBY01000015.1| 101104 101286 1 + 183 hypothetical protein - none -
fig|6666666.67496.peg.705 CDS gi|512068965|gb|ATBY01000015.1| 102700 101255 -1 - 1446 Sucrose-6-phosphate hydrolase (EC 3.2.1.26) Sucrose utilization
fig|6666666.67496.peg.706 CDS gi|512068965|gb|ATBY01000015.1| 103998 102697 -3 - 1302 Sucrose permease, major facilitator superfamily Sucrose utilization
fig|6666666.67496.peg.707 CDS gi|512068965|gb|ATBY01000015.1| 104250 105269 3 + 1020 Transcriptional regulator, LacI family - none -
fig|6666666.67496.peg.708 CDS gi|512068965|gb|ATBY01000015.1| 107266 105443 -1 - 1824 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67496.peg.709 CDS gi|512068965|gb|ATBY01000015.1| 107533 107333 -1 - 201 hypothetical protein - none -
fig|6666666.67496.peg.710 CDS gi|512068965|gb|ATBY01000015.1| 108431 107538 -2 - 894 hypothetical protein - none -
fig|6666666.67496.peg.711 CDS gi|512068965|gb|ATBY01000015.1| 108599 109327 2 + 729 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67496.peg.712 CDS gi|512068965|gb|ATBY01000015.1| 109324 110016 1 + 693 FIG00546304: hypothetical protein - none -
fig|6666666.67496.peg.713 CDS gi|512068965|gb|ATBY01000015.1| 110020 112203 1 + 2184 putative integral membrane protein - none -
fig|6666666.67496.peg.714 CDS gi|512068965|gb|ATBY01000015.1| 112181 113086 2 + 906 probable integral membrane protein - none -
fig|6666666.67496.peg.715 CDS gi|512068965|gb|ATBY01000015.1| 113958 113041 -3 - 918 hypothetical protein - none -
fig|6666666.67496.peg.716 CDS gi|512068965|gb|ATBY01000015.1| 113994 114353 3 + 360 FIG00544939: hypothetical protein - none -
fig|6666666.67496.peg.717 CDS gi|512068965|gb|ATBY01000015.1| 114425 114309 -2 - 117 hypothetical protein - none -
fig|6666666.67496.peg.718 CDS gi|512068965|gb|ATBY01000015.1| 114621 115583 3 + 963 hypothetical protein - none -
fig|6666666.67496.peg.719 CDS gi|512068965|gb|ATBY01000015.1| 117682 116132 -1 - 1551 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.67496.peg.720 CDS gi|512068965|gb|ATBY01000015.1| 122358 117682 -3 - 4677 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67496.peg.721 CDS gi|512068965|gb|ATBY01000015.1| 124241 122460 -2 - 1782 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.67496.peg.722 CDS gi|512068965|gb|ATBY01000015.1| 125223 124315 -3 - 909 hypothetical protein Rv3802c - none -
fig|6666666.67496.peg.723 CDS gi|512068965|gb|ATBY01000015.1| 125679 125224 -3 - 456 FIG00544389: hypothetical protein - none -
fig|6666666.67496.peg.724 CDS gi|512068965|gb|ATBY01000015.1| 127479 125683 -3 - 1797 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67496.peg.725 CDS gi|512068965|gb|ATBY01000015.1| 128885 127890 -2 - 996 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67496.peg.726 CDS gi|512068965|gb|ATBY01000015.1| 130796 128985 -2 - 1812 hypothetical protein Rv3805c - none -
fig|6666666.67496.peg.727 CDS gi|512068965|gb|ATBY01000015.1| 131881 130886 -1 - 996 putative membrane protein - none -
fig|6666666.67496.peg.728 CDS gi|512068965|gb|ATBY01000015.1| 132416 131868 -2 - 549 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67496.peg.729 CDS gi|512068965|gb|ATBY01000015.1| 134313 132406 -3 - 1908 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67496.peg.730 CDS gi|512068965|gb|ATBY01000015.1| 134503 135627 1 + 1125 hypothetical protein - none -
fig|6666666.67496.peg.731 CDS gi|512068965|gb|ATBY01000015.1| 137487 136345 -3 - 1143 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67496.peg.732 CDS gi|512068965|gb|ATBY01000015.1| 137962 137516 -1 - 447 hypothetical protein - none -
fig|6666666.67496.peg.733 CDS gi|512068965|gb|ATBY01000015.1| 138197 140029 2 + 1833 Putative uncharacterized protein BCG_3873 - none -
fig|6666666.67496.peg.734 CDS gi|512068965|gb|ATBY01000015.1| 140156 141904 2 + 1749 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) - none -
fig|6666666.67496.peg.735 CDS gi|512068965|gb|ATBY01000015.1| 142274 141999 -2 - 276 hypothetical protein - none -
fig|6666666.67496.peg.736 CDS gi|512068965|gb|ATBY01000015.1| 143341 145062 1 + 1722 hypothetical protein - none -
fig|6666666.67496.peg.737 CDS gi|512068965|gb|ATBY01000015.1| 148365 145204 -3 - 3162 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67496.peg.738 CDS gi|512068965|gb|ATBY01000015.1| 149610 148369 -3 - 1242 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67496.peg.739 CDS gi|512068965|gb|ATBY01000015.1| 151568 149610 -2 - 1959 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67496.peg.740 CDS gi|512068965|gb|ATBY01000015.1| 153090 151858 -3 - 1233 hypothetical protein - none -
fig|6666666.67496.peg.741 CDS gi|512068965|gb|ATBY01000015.1| 153160 155322 1 + 2163 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.67496.peg.742 CDS gi|512068965|gb|ATBY01000015.1| 155889 155536 -3 - 354 hypothetical protein - none -
fig|6666666.67496.peg.743 CDS gi|512068965|gb|ATBY01000015.1| 156545 155886 -2 - 660 Putative deoxyribonuclease similar to YcfH, type 4 YcfH
fig|6666666.67496.peg.744 CDS gi|512068965|gb|ATBY01000015.1| 157290 156535 -3 - 756 conserved hypothetical protein - none -
fig|6666666.67496.peg.745 CDS gi|512068965|gb|ATBY01000015.1| 157845 157396 -3 - 450 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.746 CDS gi|512068965|gb|ATBY01000015.1| 158036 158635 2 + 600 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Streptomyces coelicolor putative secreted lipase SCD63A.10c TR:Q9KY65 (EMBL:AL356832) (331 aa) fasta scores: E(): 0.00018, 31.3% id in 214 aa, and Streptomyces coelicolor putative lipase 2SCG18.12c TR:Q9K3H5 (EMBL:AL390188) (289 aa) fasta scores: E(): 0.00064, 28.94% id in 190 aa - none -
fig|6666666.67496.peg.747 CDS gi|512068965|gb|ATBY01000015.1| 159309 161054 3 + 1746 FIG00547408: hypothetical protein - none -
fig|6666666.67496.peg.748 CDS gi|512068965|gb|ATBY01000015.1| 161831 162028 2 + 198 hypothetical protein - none -
fig|6666666.67496.peg.749 CDS gi|512068965|gb|ATBY01000015.1| 162150 162968 3 + 819 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.750 CDS gi|512068965|gb|ATBY01000015.1| 162972 163937 3 + 966 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.751 CDS gi|512068965|gb|ATBY01000015.1| 163934 164584 2 + 651 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.752 CDS gi|512068965|gb|ATBY01000015.1| 166190 164799 -2 - 1392 FIG00549624: hypothetical protein - none -
fig|6666666.67496.peg.753 CDS gi|512068965|gb|ATBY01000015.1| 166412 167887 2 + 1476 hypothetical protein - none -
fig|6666666.67496.peg.754 CDS gi|512068965|gb|ATBY01000015.1| 168111 167983 -3 - 129 hypothetical protein - none -
fig|6666666.67496.peg.755 CDS gi|512068965|gb|ATBY01000015.1| 168936 168163 -3 - 774 Cof family hydrolase - none -
fig|6666666.67496.peg.756 CDS gi|512068965|gb|ATBY01000015.1| 170189 168933 -2 - 1257 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67496.peg.757 CDS gi|512068965|gb|ATBY01000015.1| 170257 170964 1 + 708 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.67496.peg.758 CDS gi|512068965|gb|ATBY01000015.1| 170977 171969 1 + 993 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67496.peg.759 CDS gi|512068965|gb|ATBY01000015.1| 171972 172313 3 + 342 hypothetical protein - none -
fig|6666666.67496.peg.760 CDS gi|512068965|gb|ATBY01000015.1| 173523 172381 -3 - 1143 hypothetical protein - none -
fig|6666666.67496.peg.761 CDS gi|512068965|gb|ATBY01000015.1| 174281 173718 -2 - 564 putative phosphoglycerate mutase - none -
fig|6666666.67496.peg.762 CDS gi|512068965|gb|ATBY01000015.1| 175110 174301 -3 - 810 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67496.peg.763 CDS gi|512068965|gb|ATBY01000015.1| 175150 176292 1 + 1143 putative amidase - none -
fig|6666666.67496.peg.764 CDS gi|512068965|gb|ATBY01000015.1| 176304 177569 3 + 1266 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67496.peg.765 CDS gi|512068965|gb|ATBY01000015.1| 178138 177566 -1 - 573 ThiJ/PfpI family protein - none -
fig|6666666.67496.peg.766 CDS gi|512068965|gb|ATBY01000015.1| 178275 178096 -3 - 180 ThiJ/PfpI family protein - none -
fig|6666666.67496.peg.767 CDS gi|512068965|gb|ATBY01000015.1| 179348 178341 -2 - 1008 lipase, class 2 - none -
fig|6666666.67496.peg.768 CDS gi|512068965|gb|ATBY01000015.1| 179979 179497 -3 - 483 lipase, class 2 - none -
fig|6666666.67496.peg.769 CDS gi|512068965|gb|ATBY01000015.1| 181302 180454 -3 - 849 hypothetical protein - none -
fig|6666666.67496.peg.770 CDS gi|512068965|gb|ATBY01000015.1| 182047 181274 -1 - 774 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.771 CDS gi|512068965|gb|ATBY01000015.1| 183862 182051 -1 - 1812 Pyruvate kinase family protein - none -
fig|6666666.67496.peg.772 CDS gi|512068965|gb|ATBY01000015.1| 183989 185560 2 + 1572 Predicted membrane protein (DUF2319) - none -
fig|6666666.67496.peg.773 CDS gi|512068965|gb|ATBY01000015.1| 185619 186758 3 + 1140 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.67496.peg.774 CDS gi|512068965|gb|ATBY01000015.1| 187037 186912 -2 - 126 hypothetical protein - none -
fig|6666666.67496.peg.775 CDS gi|512068965|gb|ATBY01000015.1| 187053 188306 3 + 1254 hypothetical protein - none -
fig|6666666.67496.peg.776 CDS gi|512068965|gb|ATBY01000015.1| 190367 188859 -2 - 1509 Alkaline phosphatase( EC:3.1.3.1 ) - none -
fig|6666666.67496.peg.777 CDS gi|512068965|gb|ATBY01000015.1| 191658 191876 3 + 219 hypothetical protein - none -
fig|6666666.67496.peg.778 CDS gi|512068965|gb|ATBY01000015.1| 193812 192067 -3 - 1746 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) # PabAa Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67496.peg.779 CDS gi|512068965|gb|ATBY01000015.1| 193989 194594 3 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67496.peg.780 CDS gi|512068965|gb|ATBY01000015.1| 194595 195269 3 + 675 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67496.peg.781 CDS gi|512068965|gb|ATBY01000015.1| 195422 196639 2 + 1218 hypothetical protein - none -
fig|6666666.67496.peg.782 CDS gi|512068965|gb|ATBY01000015.1| 198345 197728 -3 - 618 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67496.peg.783 CDS gi|512068965|gb|ATBY01000015.1| 198462 199070 3 + 609 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67496.peg.784 CDS gi|512068965|gb|ATBY01000015.1| 199320 199096 -3 - 225 hypothetical protein - none -
fig|6666666.67496.peg.785 CDS gi|512068965|gb|ATBY01000015.1| 199379 200473 2 + 1095 FIG00544207: hypothetical protein - none -
fig|6666666.67496.peg.786 CDS gi|512068965|gb|ATBY01000015.1| 201688 200585 -1 - 1104 hypothetical protein - none -
fig|6666666.67496.peg.787 CDS gi|512068965|gb|ATBY01000015.1| 203196 201814 -3 - 1383 FIG00544355: hypothetical protein - none -
fig|6666666.67496.peg.788 CDS gi|512068965|gb|ATBY01000015.1| 203250 203861 3 + 612 FIG071084: hypothetical protein - none -
fig|6666666.67496.peg.789 CDS gi|512068965|gb|ATBY01000015.1| 204847 205245 1 + 399 hypothetical protein - none -
fig|6666666.67496.peg.790 CDS gi|512068965|gb|ATBY01000015.1| 205399 206361 1 + 963 Site-specific DNA-methyltransferase - none -
fig|6666666.67496.peg.791 CDS gi|512068965|gb|ATBY01000015.1| 207789 207151 -3 - 639 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67496.peg.792 CDS gi|512068965|gb|ATBY01000015.1| 208994 207786 -2 - 1209 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67496.peg.793 CDS gi|512068965|gb|ATBY01000015.1| 209157 209546 3 + 390 FIG00544353: hypothetical protein - none -
fig|6666666.67496.peg.794 CDS gi|512068965|gb|ATBY01000015.1| 210002 209844 -2 - 159 FIG060545: short hypothetical protein - none -
fig|6666666.67496.peg.795 CDS gi|512068965|gb|ATBY01000015.1| 210749 210003 -2 - 747 FIG054872: Sortase-like protein - none -
fig|6666666.67496.peg.796 CDS gi|512068965|gb|ATBY01000015.1| 210804 211865 3 + 1062 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67496.peg.797 CDS gi|512068965|gb|ATBY01000015.1| 212424 211858 -3 - 567 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.798 CDS gi|512068965|gb|ATBY01000015.1| 212837 212571 -2 - 267 FIG00545001: hypothetical protein - none -
fig|6666666.67496.peg.799 CDS gi|512068965|gb|ATBY01000015.1| 213830 212931 -2 - 900 Universal stress protein family - none -
fig|6666666.67496.peg.800 CDS gi|512068965|gb|ATBY01000015.1| 214049 213903 -2 - 147 FIG00544217: hypothetical protein - none -
fig|6666666.67496.peg.801 CDS gi|512068965|gb|ATBY01000015.1| 214362 214991 3 + 630 hypothetical protein - none -
fig|6666666.67496.peg.802 CDS gi|512068965|gb|ATBY01000015.1| 215065 215484 1 + 420 hypothetical protein - none -
fig|6666666.67496.peg.803 CDS gi|512068965|gb|ATBY01000015.1| 215566 216522 1 + 957 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67496.peg.804 CDS gi|512068965|gb|ATBY01000015.1| 217934 216789 -2 - 1146 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.67496.peg.805 CDS gi|512068965|gb|ATBY01000015.1| 218098 218790 1 + 693 putative ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.806 CDS gi|512068965|gb|ATBY01000015.1| 218790 221417 3 + 2628 ABC-type transporter, permease component - none -
fig|6666666.67496.peg.807 CDS gi|512068965|gb|ATBY01000015.1| 222069 222995 3 + 927 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.67496.peg.808 CDS gi|512068965|gb|ATBY01000015.1| 222997 224187 1 + 1191 hypothetical protein - none -
fig|6666666.67496.peg.809 CDS gi|512068965|gb|ATBY01000015.1| 224174 225328 2 + 1155 hypothetical protein - none -
fig|6666666.67496.peg.810 CDS gi|512068965|gb|ATBY01000015.1| 225931 225782 -1 - 150 hypothetical protein - none -
fig|6666666.67496.peg.811 CDS gi|512068965|gb|ATBY01000015.1| 227295 226243 -3 - 1053 NAD(P)H-dependent 2-cyclohexen-1-one reductase - none -
fig|6666666.67496.peg.812 CDS gi|512068965|gb|ATBY01000015.1| 229123 227975 -1 - 1149 DNA-binding protein - none -
fig|6666666.67496.peg.813 CDS gi|512068965|gb|ATBY01000015.1| 235148 236521 2 + 1374 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67496.peg.814 CDS gi|512068965|gb|ATBY01000015.1| 237425 236613 -2 - 813 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67496.peg.815 CDS gi|512068965|gb|ATBY01000015.1| 238332 237964 -3 - 369 Thioredoxin - none -
fig|6666666.67496.peg.816 CDS gi|512068965|gb|ATBY01000015.1| 239934 238429 -3 - 1506 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67496.peg.817 CDS gi|512068965|gb|ATBY01000015.1| 240935 240483 -2 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67496.peg.818 CDS gi|512068965|gb|ATBY01000015.1| 241637 240996 -2 - 642 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67496.peg.819 CDS gi|512068965|gb|ATBY01000015.1| 242022 241753 -3 - 270 SSU ribosomal protein S6p - none -
fig|6666666.67496.peg.820 CDS gi|512068965|gb|ATBY01000015.1| 242377 242159 -1 - 219 hypothetical protein - none -
fig|6666666.67496.peg.821 CDS gi|512068965|gb|ATBY01000015.1| 242562 242377 -3 - 186 FIG00544411: hypothetical protein - none -
fig|6666666.67496.peg.822 CDS gi|512068965|gb|ATBY01000015.1| 243980 242568 -2 - 1413 putative membrane protein - none -
fig|6666666.67496.peg.823 CDS gi|512068965|gb|ATBY01000015.1| 246138 243982 -3 - 2157 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67496.peg.824 CDS gi|512068965|gb|ATBY01000015.1| 247529 247140 -2 - 390 FIG00544267: hypothetical protein - none -
fig|6666666.67496.peg.825 CDS gi|512068965|gb|ATBY01000015.1| 247881 248336 3 + 456 Transcriptional regulator, MarR family - none -
fig|6666666.67496.peg.826 CDS gi|512068965|gb|ATBY01000015.1| 248442 249350 3 + 909 Universal stress protein family - none -
fig|6666666.67496.peg.827 CDS gi|512068965|gb|ATBY01000015.1| 249418 250137 1 + 720 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67496.peg.828 CDS gi|512068965|gb|ATBY01000015.1| 250145 250555 2 + 411 hypothetical membrane protein - none -
fig|6666666.67496.peg.829 CDS gi|512068965|gb|ATBY01000015.1| 250919 252136 2 + 1218 restriction enzyme - none -
fig|6666666.67496.peg.830 CDS gi|512068965|gb|ATBY01000015.1| 253329 252133 -3 - 1197 DNA-cytosine methyltransferase (EC 2.1.1.37) DNA repair, bacterial
fig|6666666.67496.peg.831 CDS gi|512068965|gb|ATBY01000015.1| 255905 254088 -2 - 1818 hypothetical protein - none -
fig|6666666.67496.peg.832 CDS gi|512068965|gb|ATBY01000015.1| 258094 257951 -1 - 144 hypothetical protein - none -
fig|6666666.67496.peg.833 CDS gi|512068965|gb|ATBY01000015.1| 259781 259275 -2 - 507 hypothetical protein - none -
fig|6666666.67496.peg.834 CDS gi|512068965|gb|ATBY01000015.1| 260796 260185 -3 - 612 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67496.peg.835 CDS gi|512068965|gb|ATBY01000015.1| 261356 262342 2 + 987 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.67496.peg.836 CDS gi|512068965|gb|ATBY01000015.1| 262857 264107 3 + 1251 hypothetical protein - none -
fig|6666666.67496.peg.837 CDS gi|512068965|gb|ATBY01000015.1| 265102 264242 -1 - 861 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67496.peg.838 CDS gi|512068965|gb|ATBY01000015.1| 265862 265107 -2 - 756 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67496.peg.839 CDS gi|512068965|gb|ATBY01000015.1| 266358 265936 -3 - 423 putative membrane protein - none -
fig|6666666.67496.peg.840 CDS gi|512068965|gb|ATBY01000015.1| 266455 268272 1 + 1818 hypothetical protein - none -
fig|6666666.67496.peg.841 CDS gi|512068965|gb|ATBY01000015.1| 268278 269324 3 + 1047 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67496.peg.842 CDS gi|512068965|gb|ATBY01000015.1| 269398 270417 1 + 1020 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67496.peg.843 CDS gi|512068965|gb|ATBY01000015.1| 270414 271199 3 + 786 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67496.peg.844 CDS gi|512068965|gb|ATBY01000015.1| 271316 272131 2 + 816 hypothetical protein - none -
fig|6666666.67496.peg.845 CDS gi|512068965|gb|ATBY01000015.1| 272173 273084 1 + 912 putative secreted protein - none -
fig|6666666.67496.peg.846 CDS gi|512068965|gb|ATBY01000015.1| 273198 273377 3 + 180 hypothetical protein - none -
fig|6666666.67496.peg.847 CDS gi|512068965|gb|ATBY01000015.1| 274397 273549 -2 - 849 hypothetical protein; putative His-Me finger endonuclease domain - none -
fig|6666666.67496.peg.848 CDS gi|512068965|gb|ATBY01000015.1| 274452 274589 3 + 138 hypothetical protein - none -
fig|6666666.67496.peg.849 CDS gi|512068965|gb|ATBY01000015.1| 276376 275885 -1 - 492 Conserved integral membrane protein - none -
fig|6666666.67496.peg.850 CDS gi|512068965|gb|ATBY01000015.1| 277864 276377 -1 - 1488 ATP-dependent Zn protease - none -
fig|6666666.67496.peg.851 CDS gi|512068965|gb|ATBY01000015.1| 278426 278052 -2 - 375 hypothetical protein - none -
fig|6666666.67496.peg.852 CDS gi|512068965|gb|ATBY01000015.1| 278580 279368 3 + 789 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67496.peg.853 CDS gi|512068965|gb|ATBY01000015.1| 280490 279489 -2 - 1002 hypothetical protein - none -
fig|6666666.67496.peg.854 CDS gi|512068965|gb|ATBY01000015.1| 289564 281564 -1 - 8001 hypothetical protein - none -
fig|6666666.67496.peg.855 CDS gi|512068965|gb|ATBY01000015.1| 292655 289812 -2 - 2844 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67496.peg.856 CDS gi|512068965|gb|ATBY01000015.1| 294095 292830 -2 - 1266 putative transmembrane symporter - none -
fig|6666666.67496.peg.857 CDS gi|512068965|gb|ATBY01000015.1| 294204 294680 3 + 477 Putative integral membrane protein - none -
fig|6666666.67496.peg.858 CDS gi|512068965|gb|ATBY01000015.1| 295015 296532 1 + 1518 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67496.peg.859 CDS gi|512068965|gb|ATBY01000015.1| 296532 297143 3 + 612 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67496.peg.860 CDS gi|512068965|gb|ATBY01000015.1| 297143 298531 2 + 1389 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67496.peg.861 CDS gi|512068965|gb|ATBY01000015.1| 298521 299753 3 + 1233 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67496.peg.862 CDS gi|512068965|gb|ATBY01000015.1| 299757 300599 3 + 843 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67496.peg.863 CDS gi|512068965|gb|ATBY01000015.1| 301599 301943 3 + 345 Putative iron-sulphur protein - none -
fig|6666666.67496.peg.864 CDS gi|512068965|gb|ATBY01000015.1| 302051 303013 2 + 963 Sodium - Bile acid symporter - none -
fig|6666666.67496.peg.865 CDS gi|512068965|gb|ATBY01000015.1| 303006 303305 3 + 300 No significant database matches - none -
fig|6666666.67496.peg.866 CDS gi|512068965|gb|ATBY01000015.1| 303695 303348 -2 - 348 hypothetical membrane protein - none -
fig|6666666.67496.peg.867 CDS gi|512068965|gb|ATBY01000015.1| 304398 303685 -3 - 714 Branched-chain amino acid transport protein azlC - none -
fig|6666666.67496.peg.868 CDS gi|512068965|gb|ATBY01000015.1| 305037 304462 -3 - 576 Putative transcriptional regulator - none -
fig|6666666.67496.peg.869 CDS gi|512068965|gb|ATBY01000015.1| 306543 305122 -3 - 1422 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67496.peg.870 CDS gi|512068965|gb|ATBY01000015.1| 306821 307318 2 + 498 MutT/nudix family protein - none -
fig|6666666.67496.peg.871 CDS gi|512068965|gb|ATBY01000015.1| 307315 309363 1 + 2049 probable secreted protein. - none -
fig|6666666.67496.peg.872 CDS gi|512068965|gb|ATBY01000015.1| 309388 311844 1 + 2457 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67496.peg.873 CDS gi|512068965|gb|ATBY01000015.1| 311946 312482 3 + 537 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.67496.peg.874 CDS gi|512068965|gb|ATBY01000015.1| 314125 315165 1 + 1041 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.67496.peg.875 CDS gi|512068965|gb|ATBY01000015.1| 315176 315493 2 + 318 Thioredoxin - none -
fig|6666666.67496.peg.876 CDS gi|512068965|gb|ATBY01000015.1| 315591 316724 3 + 1134 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.67496.peg.877 CDS gi|512068965|gb|ATBY01000015.1| 317301 316741 -3 - 561 FIG007808: hypothetical protein - none -
fig|6666666.67496.peg.878 CDS gi|512068965|gb|ATBY01000015.1| 318390 317302 -3 - 1089 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67496.peg.879 CDS gi|512068965|gb|ATBY01000015.1| 319289 318390 -2 - 900 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67496.peg.880 CDS gi|512068965|gb|ATBY01000015.1| 319913 319296 -2 - 618 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67496.peg.881 CDS gi|512068965|gb|ATBY01000015.1| 321771 320806 -3 - 966 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster
fig|6666666.67496.peg.882 CDS gi|512068965|gb|ATBY01000015.1| 322291 322007 -1 - 285 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.67496.peg.883 CDS gi|512068965|gb|ATBY01000015.1| 322525 322382 -1 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67496.peg.884 CDS gi|512068965|gb|ATBY01000015.1| 323205 324755 3 + 1551 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67496.peg.885 CDS gi|512068965|gb|ATBY01000015.1| 325284 326459 3 + 1176 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67496.peg.886 CDS gi|512068965|gb|ATBY01000015.1| 326461 327582 1 + 1122 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67496.peg.887 CDS gi|512068965|gb|ATBY01000015.1| 327572 328078 2 + 507 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67496.peg.888 CDS gi|512068965|gb|ATBY01000015.1| 328286 328432 2 + 147 hypothetical protein - none -
fig|6666666.67496.peg.889 CDS gi|512068965|gb|ATBY01000015.1| 329149 331227 1 + 2079 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67496.peg.890 CDS gi|512068965|gb|ATBY01000015.1| 331490 332341 2 + 852 hypothetical protein - none -
fig|6666666.67496.peg.891 CDS gi|512068965|gb|ATBY01000015.1| 332821 332357 -1 - 465 hypothetical protein - none -
fig|6666666.67496.peg.892 CDS gi|512068965|gb|ATBY01000015.1| 333020 333253 2 + 234 putative helicase - none -
fig|6666666.67496.peg.893 CDS gi|512068965|gb|ATBY01000015.1| 333250 333867 1 + 618 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) - none -
fig|6666666.67496.peg.894 CDS gi|512068965|gb|ATBY01000015.1| 334262 335206 2 + 945 putative iron ABC transport system, solute-binding protein - none -
fig|6666666.67496.peg.895 CDS gi|512068965|gb|ATBY01000015.1| 335423 335244 -2 - 180 hypothetical protein - none -
fig|6666666.67496.peg.896 CDS gi|512068965|gb|ATBY01000015.1| 335413 336402 1 + 990 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67496.peg.897 CDS gi|512068965|gb|ATBY01000015.1| 336399 337484 3 + 1086 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.67496.peg.898 CDS gi|512068965|gb|ATBY01000015.1| 337477 338271 1 + 795 putative iron transporter ATP-binding protein - none -
fig|6666666.67496.peg.899 CDS gi|512068965|gb|ATBY01000015.1| 339240 338425 -3 - 816 Siderophore-interacting protein - none -
fig|6666666.67496.peg.900 CDS gi|512068965|gb|ATBY01000015.1| 339524 339733 2 + 210 hypothetical protein - none -
fig|6666666.67496.peg.901 CDS gi|512068965|gb|ATBY01000015.1| 341176 342327 1 + 1152 hypothetical protein - none -
fig|6666666.67496.peg.902 CDS gi|512068965|gb|ATBY01000015.1| 343415 344140 2 + 726 putative helicase - none -
fig|6666666.67496.peg.903 CDS gi|512068965|gb|ATBY01000015.1| 344095 348345 1 + 4251 putative helicase - none -
fig|6666666.67496.peg.904 CDS gi|512068965|gb|ATBY01000015.1| 348353 349855 2 + 1503 hypothetical protein - none -
fig|6666666.67496.peg.905 CDS gi|512068965|gb|ATBY01000015.1| 353058 349852 -3 - 3207 Endonuclease - none -
fig|6666666.67496.peg.906 CDS gi|512068965|gb|ATBY01000015.1| 353736 353473 -3 - 264 hypothetical protein - none -
fig|6666666.67496.peg.907 CDS gi|512068965|gb|ATBY01000015.1| 353602 354579 1 + 978 Beta-glucoside bgl operon antiterminator, BglG family - none -
fig|6666666.67496.peg.908 CDS gi|512068965|gb|ATBY01000015.1| 354607 356697 1 + 2091 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.67496.peg.909 CDS gi|512068965|gb|ATBY01000015.1| 356746 357684 1 + 939 hypothetical protein - none -
fig|6666666.67496.peg.910 CDS gi|512068965|gb|ATBY01000015.1| 358080 357844 -3 - 237 hypothetical protein - none -
fig|6666666.67496.peg.911 CDS gi|512068965|gb|ATBY01000015.1| 358259 358077 -2 - 183 hypothetical protein - none -
fig|6666666.67496.peg.912 CDS gi|512068965|gb|ATBY01000015.1| 358693 358262 -1 - 432 hypothetical protein - none -
fig|6666666.67496.peg.913 CDS gi|512068965|gb|ATBY01000015.1| 358791 361400 3 + 2610 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67496.peg.914 CDS gi|512068965|gb|ATBY01000015.1| 361405 361746 1 + 342 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67496.peg.915 CDS gi|512068965|gb|ATBY01000015.1| 362166 362282 3 + 117 hypothetical protein - none -
fig|6666666.67496.peg.916 CDS gi|512068965|gb|ATBY01000015.1| 363164 362433 -2 - 732 putative secreted protein - none -
fig|6666666.67496.peg.917 CDS gi|512068965|gb|ATBY01000015.1| 363559 369675 1 + 6117 hypothetical protein - none -
fig|6666666.67496.peg.918 CDS gi|512068965|gb|ATBY01000015.1| 372615 370564 -3 - 2052 Putative membrane protein - none -
fig|6666666.67496.peg.919 CDS gi|512068965|gb|ATBY01000015.1| 373260 372619 -3 - 642 hypothetical protein - none -
fig|6666666.67496.peg.920 CDS gi|512068965|gb|ATBY01000015.1| 373353 373928 3 + 576 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.921 CDS gi|512068965|gb|ATBY01000015.1| 374723 373890 -2 - 834 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.67496.peg.922 CDS gi|512068965|gb|ATBY01000015.1| 375322 376242 1 + 921 hypothetical protein - none -
fig|6666666.67496.peg.923 CDS gi|512068965|gb|ATBY01000015.1| 378084 380531 3 + 2448 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67496.peg.924 CDS gi|512068965|gb|ATBY01000015.1| 380532 381149 3 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67496.peg.925 CDS gi|512068965|gb|ATBY01000015.1| 381151 382116 1 + 966 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67496.peg.926 CDS gi|512068965|gb|ATBY01000015.1| 382116 382712 3 + 597 Putative oxidoreductase component of anaerobic dehydrogenases; Chaperone protein TorD - none -
fig|6666666.67496.peg.927 CDS gi|512068965|gb|ATBY01000015.1| 382705 383430 1 + 726 hypothetical protein - none -
fig|6666666.67496.peg.928 CDS gi|512068965|gb|ATBY01000015.1| 384422 383520 -2 - 903 hypothetical protein - none -
fig|6666666.67496.peg.929 CDS gi|512068965|gb|ATBY01000015.1| 384996 386378 3 + 1383 hypothetical protein - none -
fig|6666666.67496.peg.930 CDS gi|512068965|gb|ATBY01000015.1| 387165 388955 3 + 1791 hypothetical protein - none -
fig|6666666.67496.peg.931 CDS gi|512068965|gb|ATBY01000015.1| 392147 389037 -2 - 3111 hypothetical protein - none -
fig|6666666.67496.peg.932 CDS gi|512068965|gb|ATBY01000015.1| 392370 393923 3 + 1554 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.67496.peg.933 CDS gi|512068965|gb|ATBY01000015.1| 394257 395426 3 + 1170 hypothetical protein - none -
fig|6666666.67496.peg.934 CDS gi|512068965|gb|ATBY01000015.1| 395659 396111 1 + 453 hypothetical protein - none -
fig|6666666.67496.peg.935 CDS gi|512068965|gb|ATBY01000015.1| 396967 396116 -1 - 852 hypothetical protein - none -
fig|6666666.67496.peg.936 CDS gi|512068965|gb|ATBY01000015.1| 397795 397031 -1 - 765 hypothetical protein - none -
fig|6666666.67496.peg.937 CDS gi|512068965|gb|ATBY01000015.1| 397776 397892 3 + 117 hypothetical protein - none -
fig|6666666.67496.peg.938 CDS gi|512068965|gb|ATBY01000015.1| 398590 398093 -1 - 498 hypothetical protein - none -
fig|6666666.67496.peg.939 CDS gi|512068965|gb|ATBY01000015.1| 398589 398777 3 + 189 hypothetical protein - none -
fig|6666666.67496.peg.940 CDS gi|512068965|gb|ATBY01000015.1| 400525 398912 -1 - 1614 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67496.peg.941 CDS gi|512068965|gb|ATBY01000015.1| 401618 400683 -2 - 936 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.67496.peg.942 CDS gi|512068965|gb|ATBY01000015.1| 401634 401855 3 + 222 hypothetical protein - none -
fig|6666666.67496.peg.943 CDS gi|512068965|gb|ATBY01000015.1| 402159 403148 3 + 990 Transcriptional regulator, LacI family - none -
fig|6666666.67496.peg.944 CDS gi|512068965|gb|ATBY01000015.1| 403145 404101 2 + 957 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67496.peg.945 CDS gi|512068965|gb|ATBY01000015.1| 404126 405559 2 + 1434 putative transport protein - none -
fig|6666666.67496.peg.946 CDS gi|512068965|gb|ATBY01000015.1| 405572 406510 2 + 939 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.947 CDS gi|512068965|gb|ATBY01000015.1| 406793 406521 -2 - 273 hypothetical protein - none -
fig|6666666.67496.peg.948 CDS gi|512068965|gb|ATBY01000015.1| 407376 408305 3 + 930 Deoxyribonucleoside regulator DeoR (transcriptional repressor) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67496.peg.949 CDS gi|512068965|gb|ATBY01000015.1| 408390 409028 3 + 639 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67496.peg.950 CDS gi|512068965|gb|ATBY01000015.1| 409025 410353 2 + 1329 Homolog of fucose/glucose/galactose permeases - none -
fig|6666666.67496.peg.951 CDS gi|512068965|gb|ATBY01000015.1| 410366 411367 2 + 1002 Putative uncharacterized protein STY3991 - none -
fig|6666666.67496.peg.952 CDS gi|512068965|gb|ATBY01000015.1| 411371 412273 2 + 903 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67496.peg.953 CDS gi|512068965|gb|ATBY01000015.1| 413430 412654 -3 - 777 Mobile element protein - none -
fig|6666666.67496.peg.954 CDS gi|512068965|gb|ATBY01000015.1| 414104 413436 -2 - 669 Mobile element protein - none -
fig|6666666.67496.peg.955 CDS gi|512068965|gb|ATBY01000015.1| 414617 414432 -2 - 186 Mobile element protein - none -
fig|6666666.67496.peg.956 CDS gi|512068965|gb|ATBY01000015.1| 415611 415150 -3 - 462 hypothetical protein - none -
fig|6666666.67496.peg.957 CDS gi|512068965|gb|ATBY01000015.1| 416265 417590 3 + 1326 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67496.peg.958 CDS gi|512068965|gb|ATBY01000015.1| 417648 419120 3 + 1473 Anaerobic C4-dicarboxylate transporter DcuC - none -
fig|6666666.67496.peg.959 CDS gi|512068965|gb|ATBY01000015.1| 422829 421558 -3 - 1272 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.960 CDS gi|512068965|gb|ATBY01000015.1| 423767 422832 -2 - 936 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.961 CDS gi|512068965|gb|ATBY01000015.1| 424333 423767 -1 - 567 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67496.peg.962 CDS gi|512068965|gb|ATBY01000015.1| 425095 425571 1 + 477 putative transcriptional regulator - none -
fig|6666666.67496.peg.963 CDS gi|512068965|gb|ATBY01000015.1| 426200 427168 2 + 969 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway
fig|6666666.67496.peg.964 CDS gi|512068965|gb|ATBY01000015.1| 427308 428249 3 + 942 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway
fig|6666666.67496.peg.965 CDS gi|512068965|gb|ATBY01000015.1| 428359 429963 1 + 1605 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.67496.peg.966 CDS gi|512068965|gb|ATBY01000015.1| 431657 430350 -2 - 1308 Mobile element protein - none -
fig|6666666.67496.peg.967 CDS gi|512068965|gb|ATBY01000015.1| 432013 432195 1 + 183 hypothetical protein - none -
fig|6666666.67496.peg.968 CDS gi|512068965|gb|ATBY01000015.1| 432362 432183 -2 - 180 hypothetical protein - none -
fig|6666666.67496.peg.969 CDS gi|512068965|gb|ATBY01000015.1| 433446 434585 3 + 1140 FIG00547886: hypothetical protein - none -
fig|6666666.67496.peg.970 CDS gi|512068965|gb|ATBY01000015.1| 434654 434944 2 + 291 hypothetical protein - none -
fig|6666666.67496.peg.971 CDS gi|512068965|gb|ATBY01000015.1| 435597 435839 3 + 243 hypothetical protein - none -
fig|6666666.67496.peg.972 CDS gi|512068965|gb|ATBY01000015.1| 435914 437023 2 + 1110 MloA - none -
fig|6666666.67496.peg.973 CDS gi|512068965|gb|ATBY01000015.1| 438356 437550 -2 - 807 hypothetical protein - none -
fig|6666666.67496.peg.974 CDS gi|512068965|gb|ATBY01000015.1| 439127 438387 -2 - 741 hypothetical protein - none -
fig|6666666.67496.peg.975 CDS gi|512069751|gb|ATBY01000014.1| 1365 1114 -3 - 252 hypothetical protein - none -
fig|6666666.67496.peg.976 CDS gi|512069751|gb|ATBY01000014.1| 2481 1369 -3 - 1113 Putative reducing hydrogenase alpha subunit - none -
fig|6666666.67496.peg.977 CDS gi|512069751|gb|ATBY01000014.1| 2525 2863 2 + 339 [NiFe] hydrogenase nickel incorporation protein HypA G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67496.peg.978 CDS gi|512069751|gb|ATBY01000014.1| 3347 2844 -2 - 504 Hydrogenase maturation protease (EC 3.4.24.-) - none -
fig|6666666.67496.peg.979 CDS gi|512069751|gb|ATBY01000014.1| 4249 3344 -1 - 906 Ni,Fe-hydrogenase I cytochrome b subunit Hydrogenases
fig|6666666.67496.peg.980 CDS gi|512069751|gb|ATBY01000014.1| 6003 4249 -3 - 1755 Uptake hydrogenase large subunit (EC 1.12.99.6) Hydrogenases
fig|6666666.67496.peg.981 CDS gi|512069751|gb|ATBY01000014.1| 7224 6004 -3 - 1221 Uptake hydrogenase small subunit precursor (EC 1.12.99.6) Hydrogenases
fig|6666666.67496.peg.982 CDS gi|512069751|gb|ATBY01000014.1| 8057 7221 -2 - 837 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67496.peg.983 CDS gi|512069751|gb|ATBY01000014.1| 8585 10876 2 + 2292 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67496.peg.984 CDS gi|512069751|gb|ATBY01000014.1| 11022 11327 3 + 306 hypothetical protein - none -
fig|6666666.67496.peg.985 CDS gi|512069751|gb|ATBY01000014.1| 12444 11377 -3 - 1068 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67496.peg.986 CDS gi|512069751|gb|ATBY01000014.1| 13588 12446 -1 - 1143 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67496.peg.987 CDS gi|512069751|gb|ATBY01000014.1| 13770 13585 -3 - 186 [NiFe] hydrogenase metallocenter assembly protein HypC G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.67496.peg.988 CDS gi|512069751|gb|ATBY01000014.1| 15113 13857 -2 - 1257 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67496.peg.989 CDS gi|512069751|gb|ATBY01000014.1| 15221 15673 2 + 453 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67496.peg.990 CDS gi|512069751|gb|ATBY01000014.1| 15733 16305 1 + 573 Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) G3E family of P-loop GTPases (metallocenter biosynthesis);
Glycerol fermentation to 1,3-propanediol
fig|6666666.67496.peg.991 CDS gi|512069751|gb|ATBY01000014.1| 17479 16637 -1 - 843 Putative transcriptional regulator - none -
fig|6666666.67496.peg.992 CDS gi|512069751|gb|ATBY01000014.1| 18045 17587 -3 - 459 hypothetical protein - none -
fig|6666666.67496.peg.993 CDS gi|512069751|gb|ATBY01000014.1| 18159 19145 3 + 987 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67496.peg.994 CDS gi|512069751|gb|ATBY01000014.1| 19235 19828 2 + 594 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67496.peg.995 CDS gi|512069751|gb|ATBY01000014.1| 20236 19928 -1 - 309 predicted acetyltransferase - none -
fig|6666666.67496.peg.996 CDS gi|512069751|gb|ATBY01000014.1| 21351 20845 -3 - 507 hypothetical protein - none -
fig|6666666.67496.peg.997 CDS gi|512069751|gb|ATBY01000014.1| 23114 21606 -2 - 1509 putative coenzyme A transferase - none -
fig|6666666.67496.peg.998 CDS gi|512069751|gb|ATBY01000014.1| 23182 24411 1 + 1230 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67496.peg.999 CDS gi|512069751|gb|ATBY01000014.1| 24467 25195 2 + 729 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67496.peg.1000 CDS gi|512069751|gb|ATBY01000014.1| 26026 25250 -1 - 777 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67496.peg.1001 CDS gi|512069751|gb|ATBY01000014.1| 26968 26042 -1 - 927 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67496.peg.1002 CDS gi|512069751|gb|ATBY01000014.1| 28099 26969 -1 - 1131 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67496.peg.1003 CDS gi|512069751|gb|ATBY01000014.1| 29392 28256 -1 - 1137 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67496.peg.1004 CDS gi|512069751|gb|ATBY01000014.1| 30480 29695 -3 - 786 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67496.peg.1005 CDS gi|512069751|gb|ATBY01000014.1| 30497 31195 2 + 699 FIG00544976: hypothetical protein - none -
fig|6666666.67496.peg.1006 CDS gi|512069751|gb|ATBY01000014.1| 31201 31833 1 + 633 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67496.peg.1007 CDS gi|512069751|gb|ATBY01000014.1| 32687 31830 -2 - 858 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67496.peg.1008 CDS gi|512069751|gb|ATBY01000014.1| 32694 33770 3 + 1077 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67496.peg.1009 CDS gi|512069751|gb|ATBY01000014.1| 33898 34083 1 + 186 FIG00544089: hypothetical protein - none -
fig|6666666.67496.peg.1010 CDS gi|512069751|gb|ATBY01000014.1| 35230 34184 -1 - 1047 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67496.peg.1011 CDS gi|512069751|gb|ATBY01000014.1| 36696 35248 -3 - 1449 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67496.peg.1012 CDS gi|512069751|gb|ATBY01000014.1| 37463 36774 -2 - 690 hypothetical protein - none -
fig|6666666.67496.peg.1013 CDS gi|512069751|gb|ATBY01000014.1| 37884 37516 -3 - 369 hypothetical protein - none -
fig|6666666.67496.peg.1014 CDS gi|512069751|gb|ATBY01000014.1| 39154 37925 -1 - 1230 No significant database matches - none -
fig|6666666.67496.peg.1015 CDS gi|512069751|gb|ATBY01000014.1| 41422 39161 -1 - 2262 hypothetical protein - none -
fig|6666666.67496.peg.1016 CDS gi|512069751|gb|ATBY01000014.1| 42542 41415 -2 - 1128 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67496.peg.1017 CDS gi|512069751|gb|ATBY01000014.1| 42762 43409 3 + 648 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.1018 CDS gi|512069751|gb|ATBY01000014.1| 43466 44548 2 + 1083 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67496.peg.1019 CDS gi|512069751|gb|ATBY01000014.1| 45171 44590 -3 - 582 hypothetical membrane protein - none -
fig|6666666.67496.peg.1020 CDS gi|512069751|gb|ATBY01000014.1| 46047 45172 -3 - 876 Multiple sugar ABC transporter, membrane-spanning permease protein MsmG - none -
fig|6666666.67496.peg.1021 CDS gi|512069751|gb|ATBY01000014.1| 46893 46048 -3 - 846 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF - none -
fig|6666666.67496.peg.1022 CDS gi|512069751|gb|ATBY01000014.1| 48286 46949 -1 - 1338 FIG00545076: hypothetical protein - none -
fig|6666666.67496.peg.1023 CDS gi|512069751|gb|ATBY01000014.1| 49705 48485 -1 - 1221 Chromosome segregation ATPases - none -
fig|6666666.67496.peg.1024 CDS gi|512069751|gb|ATBY01000014.1| 50829 49711 -3 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67496.peg.1025 CDS gi|512069751|gb|ATBY01000014.1| 51224 50982 -2 - 243 hypothetical protein - none -
fig|6666666.67496.peg.1026 CDS gi|512069751|gb|ATBY01000014.1| 51901 51224 -1 - 678 FIG00546625: hypothetical protein - none -
fig|6666666.67496.peg.1027 CDS gi|512069751|gb|ATBY01000014.1| 54026 51948 -2 - 2079 Protease II (EC 3.4.21.83) - none -
fig|6666666.67496.peg.1028 CDS gi|512069751|gb|ATBY01000014.1| 55080 54187 -3 - 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67496.peg.1029 CDS gi|512069751|gb|ATBY01000014.1| 55174 55989 1 + 816 hypothetical protein - none -
fig|6666666.67496.peg.1030 CDS gi|512069751|gb|ATBY01000014.1| 55986 56348 3 + 363 hypothetical protein - none -
fig|6666666.67496.peg.1031 CDS gi|512069751|gb|ATBY01000014.1| 57812 56385 -2 - 1428 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67496.peg.1032 CDS gi|512069751|gb|ATBY01000014.1| 59053 57812 -1 - 1242 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67496.peg.1033 CDS gi|512069751|gb|ATBY01000014.1| 59075 59473 2 + 399 HIT family protein - none -
fig|6666666.67496.peg.1034 CDS gi|512069751|gb|ATBY01000014.1| 59455 59715 1 + 261 Flavodoxin reductase - none -
fig|6666666.67496.peg.1035 CDS gi|512069751|gb|ATBY01000014.1| 61091 59712 -2 - 1380 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67496.peg.1036 CDS gi|512069751|gb|ATBY01000014.1| 61799 61098 -2 - 702 two-component system, response regulator - none -
fig|6666666.67496.peg.1037 CDS gi|512069751|gb|ATBY01000014.1| 63724 61973 -1 - 1752 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67496.peg.1038 CDS gi|512069751|gb|ATBY01000014.1| 64476 63724 -3 - 753 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.67496.peg.1039 CDS gi|512069751|gb|ATBY01000014.1| 65561 64515 -2 - 1047 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67496.peg.1040 CDS gi|512069751|gb|ATBY01000014.1| 66779 65565 -2 - 1215 Putative periplasmic substrate-binding transport protein - none -
fig|6666666.67496.peg.1041 CDS gi|512069751|gb|ATBY01000014.1| 67096 68568 1 + 1473 Putative amino acid export carrier protein - none -
fig|6666666.67496.peg.1042 CDS gi|512069751|gb|ATBY01000014.1| 68617 69000 1 + 384 Putative uncharacterized protein - none -
fig|6666666.67496.peg.1043 CDS gi|512069751|gb|ATBY01000014.1| 69015 70340 3 + 1326 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.67496.peg.1044 CDS gi|512069751|gb|ATBY01000014.1| 70349 70744 2 + 396 hypothetical protein - none -
fig|6666666.67496.peg.1045 CDS gi|512069751|gb|ATBY01000014.1| 70744 71427 1 + 684 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67496.peg.1046 CDS gi|512069751|gb|ATBY01000014.1| 72427 71387 -1 - 1041 Transcriptional regulator, LacI family - none -
fig|6666666.67496.peg.1047 CDS gi|512069751|gb|ATBY01000014.1| 72479 73378 2 + 900 hypothetical protein - none -
fig|6666666.67496.peg.1048 CDS gi|512069751|gb|ATBY01000014.1| 73380 74039 3 + 660 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67496.peg.1049 CDS gi|512069751|gb|ATBY01000014.1| 74036 74869 2 + 834 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67496.peg.1050 CDS gi|512069751|gb|ATBY01000014.1| 75807 74914 -3 - 894 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67496.peg.1051 CDS gi|512069751|gb|ATBY01000014.1| 77158 75800 -1 - 1359 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67496.peg.1052 CDS gi|512069751|gb|ATBY01000014.1| 77636 77169 -2 - 468 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67496.peg.1053 CDS gi|512069751|gb|ATBY01000014.1| 78330 77623 -3 - 708 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67496.peg.1054 CDS gi|512069751|gb|ATBY01000014.1| 78921 78337 -3 - 585 CarD-like transcriptional regulator - none -
fig|6666666.67496.peg.1055 CDS gi|512069751|gb|ATBY01000014.1| 79109 79612 2 + 504 FIG00544037: hypothetical protein - none -
fig|6666666.67496.peg.1056 CDS gi|512069751|gb|ATBY01000014.1| 79782 81137 3 + 1356 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67496.peg.1057 CDS gi|512069751|gb|ATBY01000014.1| 81348 81914 3 + 567 hypothetical protein - none -
fig|6666666.67496.peg.1058 CDS gi|512069751|gb|ATBY01000014.1| 82572 81901 -3 - 672 FIG00544149: hypothetical protein - none -
fig|6666666.67496.peg.1059 CDS gi|512069751|gb|ATBY01000014.1| 83163 82630 -3 - 534 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.67496.peg.1060 CDS gi|512069751|gb|ATBY01000014.1| 83239 84084 1 + 846 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67496.peg.1061 CDS gi|512069751|gb|ATBY01000014.1| 84262 84089 -1 - 174 hypothetical protein - none -
fig|6666666.67496.peg.1062 CDS gi|512069751|gb|ATBY01000014.1| 84614 84273 -2 - 342 pyrimidine dimer DNA glycosylase - none -
fig|6666666.67496.peg.1063 CDS gi|512069751|gb|ATBY01000014.1| 84969 85190 3 + 222 hypothetical protein - none -
fig|6666666.67496.peg.1064 CDS gi|512069751|gb|ATBY01000014.1| 86757 85636 -3 - 1122 FIG005429: hypothetical protein - none -
fig|6666666.67496.peg.1065 CDS gi|512069751|gb|ATBY01000014.1| 90103 86750 -1 - 3354 FIG007317: hypothetical protein - none -
fig|6666666.67496.peg.1066 CDS gi|512069751|gb|ATBY01000014.1| 90698 90096 -2 - 603 FIG039767: hypothetical protein - none -
fig|6666666.67496.peg.1067 CDS gi|512069751|gb|ATBY01000014.1| 92184 90691 -3 - 1494 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.67496.peg.1068 CDS gi|512069751|gb|ATBY01000014.1| 92729 92448 -2 - 282 hypothetical protein - none -
fig|6666666.67496.peg.1069 CDS gi|512069751|gb|ATBY01000014.1| 95771 92829 -2 - 2943 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67496.peg.1070 CDS gi|512069751|gb|ATBY01000014.1| 96461 95937 -2 - 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.67496.peg.1071 CDS gi|512069751|gb|ATBY01000014.1| 97062 96466 -3 - 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.67496.peg.1072 CDS gi|512069751|gb|ATBY01000014.1| 97610 97383 -2 - 228 hypothetical protein - none -
fig|6666666.67496.peg.1073 CDS gi|512069751|gb|ATBY01000014.1| 100437 97819 -3 - 2619 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67496.peg.1074 CDS gi|512069751|gb|ATBY01000014.1| 100363 100488 1 + 126 hypothetical protein - none -
fig|6666666.67496.peg.1075 CDS gi|512069751|gb|ATBY01000014.1| 101201 100617 -2 - 585 hypothetical protein - none -
fig|6666666.67496.peg.1076 CDS gi|512069751|gb|ATBY01000014.1| 101718 101326 -3 - 393 hypothetical protein - none -
fig|6666666.67496.peg.1077 CDS gi|512069751|gb|ATBY01000014.1| 102093 101956 -3 - 138 hypothetical protein - none -
fig|6666666.67496.peg.1078 CDS gi|512069751|gb|ATBY01000014.1| 102324 102518 3 + 195 hypothetical protein - none -
fig|6666666.67496.peg.1079 CDS gi|512069751|gb|ATBY01000014.1| 104574 102889 -3 - 1686 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.67496.peg.1080 CDS gi|512069751|gb|ATBY01000014.1| 105415 104567 -1 - 849 Beta-glucoside bgl operon antiterminator, BglG family - none -
fig|6666666.67496.peg.1081 CDS gi|512069751|gb|ATBY01000014.1| 107553 105454 -3 - 2100 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) - none -
fig|6666666.67496.peg.1082 CDS gi|512069751|gb|ATBY01000014.1| 107995 107801 -1 - 195 hypothetical protein - none -
fig|6666666.67496.peg.1083 CDS gi|512069751|gb|ATBY01000014.1| 109930 108551 -1 - 1380 hypothetical protein - none -
fig|6666666.67496.peg.1084 CDS gi|512069751|gb|ATBY01000014.1| 109958 110131 2 + 174 hypothetical protein - none -
fig|6666666.67496.peg.1085 CDS gi|512069751|gb|ATBY01000014.1| 111012 110347 -3 - 666 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.67496.peg.1086 CDS gi|512069751|gb|ATBY01000014.1| 112048 111098 -1 - 951 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.67496.peg.1087 CDS gi|512069751|gb|ATBY01000014.1| 112988 112131 -2 - 858 putative ABC transport system, ATP-binding protein - none -
fig|6666666.67496.peg.1088 CDS gi|512069751|gb|ATBY01000014.1| 113626 112985 -1 - 642 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.67496.peg.1089 CDS gi|512069751|gb|ATBY01000014.1| 114354 113623 -3 - 732 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.1090 CDS gi|512069751|gb|ATBY01000014.1| 115305 114394 -3 - 912 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.1091 CDS gi|512069751|gb|ATBY01000014.1| 115339 116286 1 + 948 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67496.peg.1092 CDS gi|512069751|gb|ATBY01000014.1| 116467 116258 -1 - 210 hypothetical protein - none -
fig|6666666.67496.peg.1093 CDS gi|512069751|gb|ATBY01000014.1| 117030 116464 -3 - 567 hypothetical protein - none -
fig|6666666.67496.peg.1094 CDS gi|512069751|gb|ATBY01000014.1| 118617 117073 -3 - 1545 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67496.peg.1095 CDS gi|512069751|gb|ATBY01000014.1| 118759 119643 1 + 885 Membrane protease family protein BA0301 - none -
fig|6666666.67496.peg.1096 CDS gi|512069751|gb|ATBY01000014.1| 119643 119840 3 + 198 hypothetical protein - none -
fig|6666666.67496.peg.1097 CDS gi|512069751|gb|ATBY01000014.1| 120944 119937 -2 - 1008 No significant database matches - none -
fig|6666666.67496.peg.1098 CDS gi|512069751|gb|ATBY01000014.1| 121619 121077 -2 - 543 FIG173306: hypothetical protein - none -
fig|6666666.67496.peg.1099 CDS gi|512069751|gb|ATBY01000014.1| 122547 121624 -3 - 924 FIG00544686: hypothetical protein - none -
fig|6666666.67496.peg.1100 CDS gi|512069751|gb|ATBY01000014.1| 122629 123297 1 + 669 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis
fig|6666666.67496.peg.1101 CDS gi|512069751|gb|ATBY01000014.1| 123784 123320 -1 - 465 FIG027937: secreted protein - none -
fig|6666666.67496.peg.1102 CDS gi|512069751|gb|ATBY01000014.1| 124560 123781 -3 - 780 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis
fig|6666666.67496.peg.1103 CDS gi|512069751|gb|ATBY01000014.1| 125392 124553 -1 - 840 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis
fig|6666666.67496.peg.1104 CDS gi|512069751|gb|ATBY01000014.1| 125965 125396 -1 - 570 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.1105 CDS gi|512069751|gb|ATBY01000014.1| 128458 125969 -1 - 2490 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster
fig|6666666.67496.peg.1106 CDS gi|512069751|gb|ATBY01000014.1| 129033 128461 -3 - 573 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Purine conversions
fig|6666666.67496.peg.1107 CDS gi|512069751|gb|ATBY01000014.1| 129934 129026 -1 - 909 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67496.peg.1108 CDS gi|512069751|gb|ATBY01000014.1| 131275 130064 -1 - 1212 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1109 CDS gi|512069751|gb|ATBY01000014.1| 131439 131921 3 + 483 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67496.peg.1110 CDS gi|512069751|gb|ATBY01000014.1| 132029 132442 2 + 414 Transcriptional regulator, MarR family - none -
fig|6666666.67496.peg.1111 CDS gi|512069751|gb|ATBY01000014.1| 133359 132463 -3 - 897 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67496.peg.1112 CDS gi|512069751|gb|ATBY01000014.1| 133670 133485 -2 - 186 hypothetical protein - none -
fig|6666666.67496.peg.1113 CDS gi|512069751|gb|ATBY01000014.1| 133922 133713 -2 - 210 hypothetical protein - none -
fig|6666666.67496.peg.1114 CDS gi|512069751|gb|ATBY01000014.1| 136064 134418 -2 - 1647 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67496.peg.1115 CDS gi|512069751|gb|ATBY01000014.1| 136276 137649 1 + 1374 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67496.peg.1116 CDS gi|512069751|gb|ATBY01000014.1| 138390 137773 -3 - 618 hypothetical protein - none -
fig|6666666.67496.peg.1117 CDS gi|512069751|gb|ATBY01000014.1| 138725 141691 2 + 2967 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67496.peg.1118 CDS gi|512069751|gb|ATBY01000014.1| 141691 142221 1 + 531 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67496.peg.1119 CDS gi|512069751|gb|ATBY01000014.1| 142218 143918 3 + 1701 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67496.peg.1120 CDS gi|512069751|gb|ATBY01000014.1| 143915 144508 2 + 594 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67496.peg.1121 CDS gi|512069751|gb|ATBY01000014.1| 144505 144768 1 + 264 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67496.peg.1122 CDS gi|512069751|gb|ATBY01000014.1| 144768 145322 3 + 555 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67496.peg.1123 CDS gi|512069751|gb|ATBY01000014.1| 145325 146695 2 + 1371 hypothetical protein - none -
fig|6666666.67496.peg.1124 CDS gi|512069751|gb|ATBY01000014.1| 146782 147978 1 + 1197 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.1125 CDS gi|512069751|gb|ATBY01000014.1| 149327 148257 -2 - 1071 Putative cytoplasmic protein - none -
fig|6666666.67496.peg.1126 CDS gi|512069751|gb|ATBY01000014.1| 150093 149335 -3 - 759 FIG00544658: hypothetical protein - none -
fig|6666666.67496.peg.1127 CDS gi|512069751|gb|ATBY01000014.1| 150339 150097 -3 - 243 FIG00544061: hypothetical protein - none -
fig|6666666.67496.peg.1128 CDS gi|512069751|gb|ATBY01000014.1| 150431 150916 2 + 486 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67496.peg.1129 CDS gi|512069751|gb|ATBY01000014.1| 150934 151635 1 + 702 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67496.peg.1130 CDS gi|512069751|gb|ATBY01000014.1| 151752 153224 3 + 1473 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis
fig|6666666.67496.peg.1131 CDS gi|512069751|gb|ATBY01000014.1| 153246 154166 3 + 921 FIG00545487: hypothetical protein - none -
fig|6666666.67496.peg.1132 CDS gi|512069751|gb|ATBY01000014.1| 154180 154524 1 + 345 hypothetical protein - none -
fig|6666666.67496.peg.1133 CDS gi|512069751|gb|ATBY01000014.1| 154529 155362 2 + 834 hypothetical protein - none -
fig|6666666.67496.peg.1134 CDS gi|512069751|gb|ATBY01000014.1| 156200 155424 -2 - 777 Putative ABC transport system membrane protein - none -
fig|6666666.67496.peg.1135 CDS gi|512069751|gb|ATBY01000014.1| 157143 156205 -3 - 939 ABC transporter, ATP-binding protein - none -
fig|6666666.67496.peg.1136 CDS gi|512069751|gb|ATBY01000014.1| 157599 157165 -3 - 435 mutT3 - none -
fig|6666666.67496.peg.1137 CDS gi|512069751|gb|ATBY01000014.1| 157902 157708 -3 - 195 hypothetical protein - none -
fig|6666666.67496.peg.1138 CDS gi|512069751|gb|ATBY01000014.1| 159412 160779 1 + 1368 FIG00543876: hypothetical protein - none -
fig|6666666.67496.peg.1139 CDS gi|512069751|gb|ATBY01000014.1| 160779 161840 3 + 1062 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67496.peg.1140 CDS gi|512069751|gb|ATBY01000014.1| 161833 164154 1 + 2322 serine/threonine protein kinase - none -
fig|6666666.67496.peg.1141 CDS gi|512069751|gb|ATBY01000014.1| 167702 164301 -2 - 3402 hypothetical protein - none -
fig|6666666.67496.peg.1142 CDS gi|512069751|gb|ATBY01000014.1| 168919 168194 -1 - 726 hypothetical protein - none -
fig|6666666.67496.peg.1143 CDS gi|512069751|gb|ATBY01000014.1| 172515 168991 -3 - 3525 hypothetical protein - none -
fig|6666666.67496.peg.1144 CDS gi|512069751|gb|ATBY01000014.1| 173881 173156 -1 - 726 hypothetical protein - none -
fig|6666666.67496.peg.1145 CDS gi|512069927|gb|ATBY01000013.1| 171 641 3 + 471 hypothetical protein - none -
fig|6666666.67496.peg.1146 CDS gi|512069927|gb|ATBY01000013.1| 1769 780 -2 - 990 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67496.peg.1147 CDS gi|512069927|gb|ATBY01000013.1| 1791 1907 3 + 117 hypothetical protein - none -
fig|6666666.67496.peg.1148 CDS gi|512069927|gb|ATBY01000013.1| 2267 3016 2 + 750 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.1149 CDS gi|512069927|gb|ATBY01000013.1| 4356 3100 -3 - 1257 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67496.peg.1150 CDS gi|512069927|gb|ATBY01000013.1| 4553 5386 2 + 834 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) - none -
fig|6666666.67496.peg.1151 CDS gi|512069927|gb|ATBY01000013.1| 6110 5487 -2 - 624 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67496.peg.1152 CDS gi|512069927|gb|ATBY01000013.1| 6746 6126 -2 - 621 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67496.peg.1153 CDS gi|512069927|gb|ATBY01000013.1| 8200 6854 -1 - 1347 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67496.peg.1154 CDS gi|512069927|gb|ATBY01000013.1| 8800 8660 -1 - 141 hypothetical protein - none -
fig|6666666.67496.peg.1155 CDS gi|512069927|gb|ATBY01000013.1| 8986 8867 -1 - 120 hypothetical protein - none -
fig|6666666.67496.peg.1156 CDS gi|512069927|gb|ATBY01000013.1| 9597 9352 -3 - 246 hypothetical protein - none -
fig|6666666.67496.peg.1157 CDS gi|512069927|gb|ATBY01000013.1| 10194 9835 -3 - 360 hypothetical protein - none -
fig|6666666.67496.peg.1158 CDS gi|512069927|gb|ATBY01000013.1| 10414 10253 -1 - 162 hypothetical protein - none -
fig|6666666.67496.peg.1159 CDS gi|512069927|gb|ATBY01000013.1| 11161 11277 1 + 117 hypothetical protein - none -
fig|6666666.67496.peg.1160 CDS gi|512069927|gb|ATBY01000013.1| 12288 11548 -3 - 741 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67496.peg.1161 CDS gi|512069927|gb|ATBY01000013.1| 12773 14545 2 + 1773 Arsenical pump-driving ATPase (EC 3.6.3.16) Arsenic resistance
fig|6666666.67496.peg.1162 CDS gi|512069927|gb|ATBY01000013.1| 14567 14692 2 + 126 hypothetical protein - none -
fig|6666666.67496.peg.1163 CDS gi|512069927|gb|ATBY01000013.1| 15181 15411 1 + 231 FIG00544802: hypothetical protein - none -
fig|6666666.67496.peg.1164 CDS gi|512069927|gb|ATBY01000013.1| 15546 16364 3 + 819 FIG00997919: hypothetical protein - none -
fig|6666666.67496.peg.1165 CDS gi|512069927|gb|ATBY01000013.1| 16880 16413 -2 - 468 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.67496.peg.1166 CDS gi|512069927|gb|ATBY01000013.1| 16905 18146 3 + 1242 Radical SAM domain heme biosynthesis protein - none -
fig|6666666.67496.peg.1167 CDS gi|512069927|gb|ATBY01000013.1| 19198 18575 -1 - 624 FIG00544229: hypothetical protein - none -
fig|6666666.67496.peg.1168 CDS gi|512069927|gb|ATBY01000013.1| 19896 19273 -3 - 624 hypothetical protein - none -
fig|6666666.67496.peg.1169 CDS gi|512069927|gb|ATBY01000013.1| 19991 21250 2 + 1260 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67496.peg.1170 CDS gi|512069927|gb|ATBY01000013.1| 21305 22075 2 + 771 putative Cof-like hydrolase - none -
fig|6666666.67496.peg.1171 CDS gi|512069927|gb|ATBY01000013.1| 22121 22678 2 + 558 hypothetical protein - none -
fig|6666666.67496.peg.1172 CDS gi|512069927|gb|ATBY01000013.1| 23604 22675 -3 - 930 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67496.peg.1173 CDS gi|512069927|gb|ATBY01000013.1| 23626 25368 1 + 1743 hypothetical protein - none -
fig|6666666.67496.peg.1174 CDS gi|512069927|gb|ATBY01000013.1| 25814 26089 2 + 276 No significant database matches - none -
fig|6666666.67496.peg.1175 CDS gi|512069927|gb|ATBY01000013.1| 29037 27493 -3 - 1545 hypothetical protein - none -
fig|6666666.67496.peg.1176 CDS gi|512069927|gb|ATBY01000013.1| 29086 29313 1 + 228 hypothetical protein - none -
fig|6666666.67496.peg.1177 CDS gi|512069927|gb|ATBY01000013.1| 29385 30056 3 + 672 hypothetical protein - none -
fig|6666666.67496.peg.1178 CDS gi|512069927|gb|ATBY01000013.1| 30336 31457 3 + 1122 hypothetical protein - none -
fig|6666666.67496.peg.1179 CDS gi|512069927|gb|ATBY01000013.1| 31947 32393 3 + 447 hypothetical protein - none -
fig|6666666.67496.peg.1180 CDS gi|512069927|gb|ATBY01000013.1| 33198 32941 -3 - 258 hypothetical protein - none -
fig|6666666.67496.peg.1181 CDS gi|512069927|gb|ATBY01000013.1| 36477 34162 -3 - 2316 FIG00545859: hypothetical protein - none -
fig|6666666.67496.peg.1182 CDS gi|512069927|gb|ATBY01000013.1| 37526 36603 -2 - 924 hypothetical protein - none -
fig|6666666.67496.peg.1183 CDS gi|512069927|gb|ATBY01000013.1| 37990 37658 -1 - 333 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67496.peg.1184 CDS gi|512069927|gb|ATBY01000013.1| 38390 38223 -2 - 168 Mobile element protein - none -
fig|6666666.67496.peg.1185 CDS gi|512069927|gb|ATBY01000013.1| 38732 40423 2 + 1692 Mobile element protein - none -
fig|6666666.67496.peg.1186 CDS gi|512069927|gb|ATBY01000013.1| 40420 41181 1 + 762 Mobile element protein - none -
fig|6666666.67496.peg.1187 CDS gi|512069927|gb|ATBY01000013.1| 41440 41273 -1 - 168 hypothetical protein - none -
fig|6666666.67496.peg.1188 CDS gi|512069927|gb|ATBY01000013.1| 41936 42052 2 + 117 hypothetical protein - none -
fig|6666666.67496.peg.1189 CDS gi|512069927|gb|ATBY01000013.1| 42333 42172 -3 - 162 Mobile element protein - none -
fig|6666666.67496.peg.1190 CDS gi|512069927|gb|ATBY01000013.1| 44411 42672 -2 - 1740 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.67496.peg.1191 CDS gi|512069927|gb|ATBY01000013.1| 45137 44490 -2 - 648 Manganese-dependent protein-tyrosine phosphatase (EC 3.1.3.48) Exopolysaccharide Biosynthesis
fig|6666666.67496.peg.1192 CDS gi|512069927|gb|ATBY01000013.1| 45881 45186 -2 - 696 Tyrosine-protein kinase EpsD (EC 2.7.10.2) Exopolysaccharide Biosynthesis
fig|6666666.67496.peg.1193 CDS gi|512069927|gb|ATBY01000013.1| 46339 45884 -1 - 456 Tyrosine-protein kinase transmembrane modulator EpsC Exopolysaccharide Biosynthesis
fig|6666666.67496.peg.1194 CDS gi|512069927|gb|ATBY01000013.1| 48086 46737 -2 - 1350 The type 2 capsule locus of Streptococcus pneumoniae - none -
fig|6666666.67496.peg.1195 CDS gi|512069927|gb|ATBY01000013.1| 49252 48155 -1 - 1098 Glycosyl transferase, group 1 family protein Exopolysaccharide Biosynthesis
fig|6666666.67496.peg.1196 CDS gi|512069927|gb|ATBY01000013.1| 50479 49262 -1 - 1218 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) - none -
fig|6666666.67496.peg.1197 CDS gi|512069927|gb|ATBY01000013.1| 50896 52461 1 + 1566 Putative uncharacterized protein in cluster with two glycosyl transferases Exopolysaccharide Biosynthesis
fig|6666666.67496.peg.1198 CDS gi|512069927|gb|ATBY01000013.1| 52892 53128 2 + 237 hypothetical protein - none -
fig|6666666.67496.peg.1199 CDS gi|512069927|gb|ATBY01000013.1| 54728 53496 -2 - 1233 Glycosyltransferase - none -
fig|6666666.67496.peg.1200 CDS gi|512069927|gb|ATBY01000013.1| 55931 54729 -2 - 1203 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67496.peg.1201 CDS gi|512069927|gb|ATBY01000013.1| 56262 55939 -3 - 324 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.67496.peg.1202 CDS gi|512069927|gb|ATBY01000013.1| 57299 56898 -2 - 402 hypothetical protein - none -
fig|6666666.67496.peg.1203 CDS gi|512069927|gb|ATBY01000013.1| 57407 58498 2 + 1092 FIG00545003: hypothetical protein - none -
fig|6666666.67496.peg.1204 CDS gi|512069927|gb|ATBY01000013.1| 58654 58905 1 + 252 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67496.peg.1205 CDS gi|512069927|gb|ATBY01000013.1| 59159 59344 2 + 186 Inner membrane protein - none -
fig|6666666.67496.peg.1206 CDS gi|512069927|gb|ATBY01000013.1| 59473 59676 1 + 204 hypothetical protein - none -
fig|6666666.67496.peg.1207 CDS gi|512069927|gb|ATBY01000013.1| 61484 59817 -2 - 1668 ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.1208 CDS gi|512069927|gb|ATBY01000013.1| 62162 61554 -2 - 609 putative cation efflux transporter - none -
fig|6666666.67496.peg.1209 CDS gi|512069927|gb|ATBY01000013.1| 62778 62221 -3 - 558 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67496.peg.1210 CDS gi|512069927|gb|ATBY01000013.1| 64853 62904 -2 - 1950 Copper resistance protein D Copper homeostasis
fig|6666666.67496.peg.1211 CDS gi|512069927|gb|ATBY01000013.1| 65312 65121 -2 - 192 hypothetical protein - none -
fig|6666666.67496.peg.1212 CDS gi|512069927|gb|ATBY01000013.1| 66319 65351 -1 - 969 Mobile element protein - none -
fig|6666666.67496.peg.1213 CDS gi|512069927|gb|ATBY01000013.1| 68118 68612 3 + 495 hypothetical protein - none -
fig|6666666.67496.peg.1214 CDS gi|512069927|gb|ATBY01000013.1| 69331 68639 -1 - 693 DUF124 domain-containing protein - none -
fig|6666666.67496.peg.1215 CDS gi|512069927|gb|ATBY01000013.1| 69604 69762 1 + 159 hypothetical protein - none -
fig|6666666.67496.peg.1216 CDS gi|512069927|gb|ATBY01000013.1| 70735 69905 -1 - 831 Lipase - none -
fig|6666666.67496.peg.1217 CDS gi|512069927|gb|ATBY01000013.1| 71656 70742 -1 - 915 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67496.peg.1218 CDS gi|512069927|gb|ATBY01000013.1| 72484 71666 -1 - 819 FIG00547092: hypothetical protein - none -
fig|6666666.67496.peg.1219 CDS gi|512069927|gb|ATBY01000013.1| 74535 72481 -3 - 2055 FIG00544816: hypothetical protein - none -
fig|6666666.67496.peg.1220 CDS gi|512069927|gb|ATBY01000013.1| 75453 74542 -3 - 912 ABC-type transporter, permease component - none -
fig|6666666.67496.peg.1221 CDS gi|512069927|gb|ATBY01000013.1| 77129 75555 -2 - 1575 Putative transport system secreted protein - none -
fig|6666666.67496.peg.1222 CDS gi|512069927|gb|ATBY01000013.1| 77345 78151 2 + 807 Transcriptional regulator, GntR family - none -
fig|6666666.67496.peg.1223 CDS gi|512069927|gb|ATBY01000013.1| 78824 78144 -2 - 681 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.67496.peg.1224 CDS gi|512069927|gb|ATBY01000013.1| 79695 78811 -3 - 885 ROK family protein - none -
fig|6666666.67496.peg.1225 CDS gi|512069927|gb|ATBY01000013.1| 81671 80526 -2 - 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67496.peg.1226 CDS gi|512069927|gb|ATBY01000013.1| 81710 82510 2 + 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.67496.peg.1227 CDS gi|512069927|gb|ATBY01000013.1| 82513 83133 1 + 621 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67496.peg.1228 CDS gi|512069927|gb|ATBY01000013.1| 83897 83301 -2 - 597 hypothetical protein - none -
fig|6666666.67496.peg.1229 CDS gi|512069927|gb|ATBY01000013.1| 83965 84615 1 + 651 hypothetical protein - none -
fig|6666666.67496.peg.1230 CDS gi|512069927|gb|ATBY01000013.1| 86733 85534 -3 - 1200 putative lipoprotein - none -
fig|6666666.67496.peg.1231 CDS gi|512069927|gb|ATBY01000013.1| 88519 86969 -1 - 1551 hypothetical protein - none -
fig|6666666.67496.peg.1232 CDS gi|512069927|gb|ATBY01000013.1| 88616 89656 2 + 1041 transcriptional regulator - none -
fig|6666666.67496.peg.1233 CDS gi|512069927|gb|ATBY01000013.1| 89769 89653 -3 - 117 hypothetical protein - none -
fig|6666666.67496.peg.1234 CDS gi|512069927|gb|ATBY01000013.1| 89804 91312 2 + 1509 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.67496.peg.1235 CDS gi|512069927|gb|ATBY01000013.1| 91309 92496 1 + 1188 D-mannonate oxidoreductase (EC 1.1.1.57) - none -
fig|6666666.67496.peg.1236 CDS gi|512069927|gb|ATBY01000013.1| 92489 94210 2 + 1722 Beta-glucuronidase (EC 3.2.1.31) - none -
fig|6666666.67496.peg.1237 CDS gi|512069927|gb|ATBY01000013.1| 94200 96221 3 + 2022 Uronate isomerase (EC 5.3.1.12) - none -
fig|6666666.67496.peg.1238 CDS gi|512069927|gb|ATBY01000013.1| 97389 96247 -3 - 1143 FIG00547886: hypothetical protein - none -
fig|6666666.67496.peg.1239 CDS gi|512069927|gb|ATBY01000013.1| 97463 97912 2 + 450 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67496.peg.1240 CDS gi|512069927|gb|ATBY01000013.1| 97966 99195 1 + 1230 Starvation sensing protein RspA Carbon Starvation
fig|6666666.67496.peg.1241 CDS gi|512069927|gb|ATBY01000013.1| 99195 99674 3 + 480 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67496.peg.1242 CDS gi|512069927|gb|ATBY01000013.1| 99993 99718 -3 - 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67496.peg.1243 CDS gi|512069927|gb|ATBY01000013.1| 100629 100039 -3 - 591 putative lipoprotein - none -
fig|6666666.67496.peg.1244 CDS gi|512069927|gb|ATBY01000013.1| 100916 100626 -2 - 291 hypothetical protein - none -
fig|6666666.67496.peg.1245 CDS gi|512069927|gb|ATBY01000013.1| 101116 101499 1 + 384 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67496.peg.1246 CDS gi|512069927|gb|ATBY01000013.1| 101492 101854 2 + 363 FIG00543835: hypothetical protein - none -
fig|6666666.67496.peg.1247 CDS gi|512069927|gb|ATBY01000013.1| 102389 101826 -2 - 564 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67496.peg.1248 CDS gi|512069927|gb|ATBY01000013.1| 103099 102386 -1 - 714 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67496.peg.1249 CDS gi|512069927|gb|ATBY01000013.1| 103818 103096 -3 - 723 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67496.peg.1250 CDS gi|512069927|gb|ATBY01000013.1| 104677 103880 -1 - 798 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1251 CDS gi|512069927|gb|ATBY01000013.1| 105570 104677 -3 - 894 hypothetical protein - none -
fig|6666666.67496.peg.1252 CDS gi|512069927|gb|ATBY01000013.1| 106405 105581 -1 - 825 hypothetical protein - none -
fig|6666666.67496.peg.1253 CDS gi|512069927|gb|ATBY01000013.1| 107022 106414 -3 - 609 FIG00545125: hypothetical protein - none -
fig|6666666.67496.peg.1254 CDS gi|512069927|gb|ATBY01000013.1| 108183 107227 -3 - 957 possible hydrolase - none -
fig|6666666.67496.peg.1255 CDS gi|512069927|gb|ATBY01000013.1| 108713 108180 -2 - 534 Transcriptional regulatory protein - none -
fig|6666666.67496.peg.1256 CDS gi|512069927|gb|ATBY01000013.1| 109016 108714 -2 - 303 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67496.peg.1257 CDS gi|512069927|gb|ATBY01000013.1| 109294 109992 1 + 699 Serine/threonine protein kinase (EC 2.7.11.1) - none -
fig|6666666.67496.peg.1258 CDS gi|512069927|gb|ATBY01000013.1| 110003 110431 2 + 429 Putative membrane protein - none -
fig|6666666.67496.peg.1259 CDS gi|512069927|gb|ATBY01000013.1| 110507 110863 2 + 357 hypothetical protein - none -
fig|6666666.67496.peg.1260 CDS gi|512069927|gb|ATBY01000013.1| 111003 110860 -3 - 144 hypothetical protein - none -
fig|6666666.67496.peg.1261 CDS gi|512069927|gb|ATBY01000013.1| 110956 112218 1 + 1263 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67496.peg.1262 CDS gi|512069927|gb|ATBY01000013.1| 112222 114144 1 + 1923 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67496.peg.1263 CDS gi|512069927|gb|ATBY01000013.1| 114171 115562 3 + 1392 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.67496.peg.1264 CDS gi|512069927|gb|ATBY01000013.1| 116199 115579 -3 - 621 hypothetical protein - none -
fig|6666666.67496.peg.1265 CDS gi|512069927|gb|ATBY01000013.1| 116944 116228 -1 - 717 FIG00546117: hypothetical protein - none -
fig|6666666.67496.peg.1266 CDS gi|512069927|gb|ATBY01000013.1| 117831 116941 -3 - 891 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67496.peg.1267 CDS gi|512069927|gb|ATBY01000013.1| 119493 117916 -3 - 1578 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67496.peg.1268 CDS gi|512069927|gb|ATBY01000013.1| 119497 119613 1 + 117 hypothetical protein - none -
fig|6666666.67496.peg.1269 CDS gi|512069927|gb|ATBY01000013.1| 121380 120373 -3 - 1008 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67496.peg.1270 CDS gi|512069927|gb|ATBY01000013.1| 121621 122346 1 + 726 Transcriptional regulator, GntR family - none -
fig|6666666.67496.peg.1271 CDS gi|512069927|gb|ATBY01000013.1| 124567 122411 -1 - 2157 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67496.peg.1272 CDS gi|512069927|gb|ATBY01000013.1| 124991 124560 -2 - 432 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67496.peg.1273 CDS gi|512069927|gb|ATBY01000013.1| 125420 125187 -2 - 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67496.peg.1274 CDS gi|512069927|gb|ATBY01000013.1| 127807 127103 -1 - 705 DNA-binding response regulator KdpE - none -
fig|6666666.67496.peg.1275 CDS gi|512069927|gb|ATBY01000013.1| 130369 127808 -1 - 2562 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67496.peg.1276 CDS gi|512069927|gb|ATBY01000013.1| 130829 130374 -2 - 456 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.67496.peg.1277 CDS gi|512069927|gb|ATBY01000013.1| 131143 130934 -1 - 210 hypothetical protein - none -
fig|6666666.67496.peg.1278 CDS gi|512069927|gb|ATBY01000013.1| 133216 131150 -1 - 2067 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.67496.peg.1279 CDS gi|512069927|gb|ATBY01000013.1| 134955 133213 -3 - 1743 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.67496.peg.1280 CDS gi|512069927|gb|ATBY01000013.1| 135211 135047 -1 - 165 hypothetical protein - none -
fig|6666666.67496.peg.1281 CDS gi|512069927|gb|ATBY01000013.1| 135666 136118 3 + 453 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67496.peg.1282 CDS gi|512069927|gb|ATBY01000013.1| 136172 137401 2 + 1230 Starvation sensing protein RspA Carbon Starvation
fig|6666666.67496.peg.1283 CDS gi|512069927|gb|ATBY01000013.1| 137401 137880 1 + 480 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67496.peg.1284 CDS gi|512069927|gb|ATBY01000013.1| 138097 137975 -1 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67496.peg.1285 CDS gi|512069927|gb|ATBY01000013.1| 139537 138209 -1 - 1329 FIG00544486: hypothetical protein - none -
fig|6666666.67496.peg.1286 CDS gi|512069927|gb|ATBY01000013.1| 139572 140411 3 + 840 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67496.peg.1287 CDS gi|512069927|gb|ATBY01000013.1| 141224 140460 -2 - 765 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.67496.peg.1288 CDS gi|512069927|gb|ATBY01000013.1| 141640 141224 -1 - 417 FIG00543983: hypothetical protein - none -
fig|6666666.67496.peg.1289 CDS gi|512069927|gb|ATBY01000013.1| 142671 141685 -3 - 987 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid
fig|6666666.67496.peg.1290 CDS gi|512069927|gb|ATBY01000013.1| 144548 142716 -2 - 1833 hypothetical protein - none -
fig|6666666.67496.peg.1291 CDS gi|512069927|gb|ATBY01000013.1| 145422 144610 -3 - 813 hypothetical protein - none -
fig|6666666.67496.peg.1292 CDS gi|512069927|gb|ATBY01000013.1| 146023 145412 -1 - 612 hypothetical protein - none -
fig|6666666.67496.peg.1293 CDS gi|512069927|gb|ATBY01000013.1| 146457 146948 3 + 492 hypothetical protein - none -
fig|6666666.67496.peg.1294 CDS gi|512069927|gb|ATBY01000013.1| 146938 148755 1 + 1818 FIG00818089: hypothetical protein - none -
fig|6666666.67496.peg.1295 CDS gi|512069927|gb|ATBY01000013.1| 149726 148998 -2 - 729 FIG00544592: hypothetical protein - none -
fig|6666666.67496.peg.1296 CDS gi|512069927|gb|ATBY01000013.1| 150275 149820 -2 - 456 FIG00544597: hypothetical protein - none -
fig|6666666.67496.peg.1297 CDS gi|512069927|gb|ATBY01000013.1| 152097 150439 -3 - 1659 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.67496.peg.1298 CDS gi|512069927|gb|ATBY01000013.1| 152375 153793 2 + 1419 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.67496.peg.1299 CDS gi|512069927|gb|ATBY01000013.1| 153804 154139 3 + 336 camphor resistance protein CrcB - none -
fig|6666666.67496.peg.1300 CDS gi|512069927|gb|ATBY01000013.1| 154143 154481 3 + 339 hypothetical protein - none -
fig|6666666.67496.peg.1301 CDS gi|512069927|gb|ATBY01000013.1| 154493 154792 2 + 300 camphor resistance protein CrcB - none -
fig|6666666.67496.peg.1302 CDS gi|512069927|gb|ATBY01000013.1| 154789 155121 1 + 333 CrcB protein - none -
fig|6666666.67496.peg.1303 CDS gi|512069927|gb|ATBY01000013.1| 155225 155109 -2 - 117 hypothetical protein - none -
fig|6666666.67496.peg.1304 CDS gi|512069927|gb|ATBY01000013.1| 155310 156656 3 + 1347 Glycerol-3-phosphate transporter Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.1305 CDS gi|512069927|gb|ATBY01000013.1| 157467 156733 -3 - 735 hypothetical protein - none -
fig|6666666.67496.peg.1306 CDS gi|512069927|gb|ATBY01000013.1| 158177 157464 -2 - 714 hypothetical protein - none -
fig|6666666.67496.peg.1307 CDS gi|512069927|gb|ATBY01000013.1| 158517 158182 -3 - 336 Additional substrate-specific component CbiN of cobalt ECF transporter ECF class transporters
fig|6666666.67496.peg.1308 CDS gi|512069927|gb|ATBY01000013.1| 159212 158514 -2 - 699 Substrate-specific component CbiM of cobalt ECF transporter ECF class transporters
fig|6666666.67496.peg.1309 CDS gi|512069927|gb|ATBY01000013.1| 159805 160521 1 + 717 hypothetical protein - none -
fig|6666666.67496.peg.1310 CDS gi|512069927|gb|ATBY01000013.1| 160715 162541 2 + 1827 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67496.peg.1311 CDS gi|512069927|gb|ATBY01000013.1| 162581 163633 2 + 1053 ABC transporter (iron.B12.siderophore.hemin) , permease component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67496.peg.1312 CDS gi|512069927|gb|ATBY01000013.1| 163693 164679 1 + 987 hypothetical protein - none -
fig|6666666.67496.peg.1313 CDS gi|512069927|gb|ATBY01000013.1| 164866 165459 1 + 594 ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67496.peg.1314 CDS gi|512069927|gb|ATBY01000013.1| 166685 165456 -2 - 1230 hypothetical protein - none -
fig|6666666.67496.peg.1315 CDS gi|512070320|gb|ATBY01000012.1| 184 1092 1 + 909 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67496.peg.1316 CDS gi|512070320|gb|ATBY01000012.1| 1450 4311 1 + 2862 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67496.peg.1317 CDS gi|512070320|gb|ATBY01000012.1| 4449 4285 -3 - 165 hypothetical protein - none -
fig|6666666.67496.peg.1318 CDS gi|512070320|gb|ATBY01000012.1| 4411 5517 1 + 1107 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67496.peg.1319 CDS gi|512070320|gb|ATBY01000012.1| 5591 5977 2 + 387 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67496.peg.1320 CDS gi|512070320|gb|ATBY01000012.1| 7905 6343 -3 - 1563 hypothetical protein - none -
fig|6666666.67496.peg.1321 CDS gi|512070320|gb|ATBY01000012.1| 8710 9486 1 + 777 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67496.peg.1322 CDS gi|512070320|gb|ATBY01000012.1| 9513 10544 3 + 1032 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67496.peg.1323 CDS gi|512070320|gb|ATBY01000012.1| 10648 11424 1 + 777 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67496.peg.1324 CDS gi|512070320|gb|ATBY01000012.1| 11738 13339 2 + 1602 putative transport protein - none -
fig|6666666.67496.peg.1325 CDS gi|512070320|gb|ATBY01000012.1| 13894 13397 -1 - 498 FIG00543905: hypothetical protein - none -
fig|6666666.67496.peg.1326 CDS gi|512070320|gb|ATBY01000012.1| 13966 15402 1 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1327 CDS gi|512070320|gb|ATBY01000012.1| 16453 16328 -1 - 126 hypothetical protein - none -
fig|6666666.67496.peg.1328 CDS gi|512070320|gb|ATBY01000012.1| 17305 16640 -1 - 666 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67496.peg.1329 CDS gi|512070320|gb|ATBY01000012.1| 17576 19156 2 + 1581 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67496.peg.1330 CDS gi|512070320|gb|ATBY01000012.1| 19835 19302 -2 - 534 mutT/nudix family protein - none -
fig|6666666.67496.peg.1331 CDS gi|512070320|gb|ATBY01000012.1| 20346 21917 3 + 1572 FIG00545265: hypothetical protein - none -
fig|6666666.67496.peg.1332 CDS gi|512070320|gb|ATBY01000012.1| 22512 23933 3 + 1422 putative secreted protein - none -
fig|6666666.67496.peg.1333 CDS gi|512070320|gb|ATBY01000012.1| 24587 25459 2 + 873 hypothetical protein - none -
fig|6666666.67496.peg.1334 CDS gi|512070320|gb|ATBY01000012.1| 25935 26318 3 + 384 putative membrane protein - none -
fig|6666666.67496.peg.1335 CDS gi|512070320|gb|ATBY01000012.1| 26382 26951 3 + 570 conserved protein (PRC-barrel domain) - none -
fig|6666666.67496.peg.1336 CDS gi|512070320|gb|ATBY01000012.1| 27684 26953 -3 - 732 ABC transporter, ATP-binding protein - none -
fig|6666666.67496.peg.1337 CDS gi|512070320|gb|ATBY01000012.1| 28043 27720 -2 - 324 hypothetical protein - none -
fig|6666666.67496.peg.1338 CDS gi|512070320|gb|ATBY01000012.1| 28255 30075 1 + 1821 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.67496.peg.1339 CDS gi|512070320|gb|ATBY01000012.1| 30065 30715 2 + 651 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.67496.peg.1340 CDS gi|512070320|gb|ATBY01000012.1| 33794 30747 -2 - 3048 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) CBSS-316057.3.peg.3521
fig|6666666.67496.peg.1341 CDS gi|512070320|gb|ATBY01000012.1| 35209 33869 -1 - 1341 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1342 CDS gi|512070320|gb|ATBY01000012.1| 35603 35475 -2 - 129 hypothetical protein - none -
fig|6666666.67496.peg.1343 CDS gi|512070320|gb|ATBY01000012.1| 35661 36686 3 + 1026 hypothetical protein - none -
fig|6666666.67496.peg.1344 CDS gi|512070320|gb|ATBY01000012.1| 36729 38495 3 + 1767 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.67496.peg.1345 CDS gi|512070320|gb|ATBY01000012.1| 38755 38552 -1 - 204 FIG00544054: hypothetical protein - none -
fig|6666666.67496.peg.1346 CDS gi|512070320|gb|ATBY01000012.1| 39006 40301 3 + 1296 hypothetical protein - none -
fig|6666666.67496.peg.1347 CDS gi|512070320|gb|ATBY01000012.1| 41041 40298 -1 - 744 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.67496.peg.1348 CDS gi|512070320|gb|ATBY01000012.1| 41633 41133 -2 - 501 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.67496.peg.1349 CDS gi|512070320|gb|ATBY01000012.1| 42306 44258 3 + 1953 hypothetical protein - none -
fig|6666666.67496.peg.1350 CDS gi|512070320|gb|ATBY01000012.1| 44259 45014 3 + 756 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.67496.peg.1351 CDS gi|512070320|gb|ATBY01000012.1| 45011 46291 2 + 1281 hypothetical protein - none -
fig|6666666.67496.peg.1352 CDS gi|512070320|gb|ATBY01000012.1| 47629 46436 -1 - 1194 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.67496.peg.1353 CDS gi|512070320|gb|ATBY01000012.1| 48318 47629 -3 - 690 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.67496.peg.1354 CDS gi|512070320|gb|ATBY01000012.1| 49445 48318 -2 - 1128 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.67496.peg.1355 CDS gi|512070320|gb|ATBY01000012.1| 50434 49433 -1 - 1002 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis
fig|6666666.67496.peg.1356 CDS gi|512070320|gb|ATBY01000012.1| 50464 51117 1 + 654 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.67496.peg.1357 CDS gi|512070320|gb|ATBY01000012.1| 51095 51580 2 + 486 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.67496.peg.1358 CDS gi|512070320|gb|ATBY01000012.1| 51587 52615 2 + 1029 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67496.peg.1359 CDS gi|512070320|gb|ATBY01000012.1| 53496 52576 -3 - 921 Adenosylcobinamide-phosphate synthase - none -
fig|6666666.67496.peg.1360 CDS gi|512070320|gb|ATBY01000012.1| 54101 53685 -2 - 417 FIG00544601: hypothetical protein - none -
fig|6666666.67496.peg.1361 CDS gi|512070320|gb|ATBY01000012.1| 54295 55755 1 + 1461 L-asparagine permease - none -
fig|6666666.67496.peg.1362 CDS gi|512070320|gb|ATBY01000012.1| 55788 58538 3 + 2751 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67496.peg.1363 CDS gi|512070320|gb|ATBY01000012.1| 59515 58535 -1 - 981 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.67496.peg.1364 CDS gi|512070320|gb|ATBY01000012.1| 59577 59807 3 + 231 hypothetical protein - none -
fig|6666666.67496.peg.1365 CDS gi|512070320|gb|ATBY01000012.1| 59865 61037 3 + 1173 No significant database matches - none -
fig|6666666.67496.peg.1366 CDS gi|512070320|gb|ATBY01000012.1| 62126 61593 -2 - 534 beta-lactamase class C - none -
fig|6666666.67496.peg.1367 CDS gi|512070320|gb|ATBY01000012.1| 63703 62384 -1 - 1320 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.67496.peg.1368 CDS gi|512070320|gb|ATBY01000012.1| 64556 63804 -2 - 753 FIG00544992: hypothetical protein - none -
fig|6666666.67496.peg.1369 CDS gi|512070320|gb|ATBY01000012.1| 64958 65200 2 + 243 FIG00547159: hypothetical protein - none -
fig|6666666.67496.peg.1370 CDS gi|512070320|gb|ATBY01000012.1| 66438 65197 -3 - 1242 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67496.peg.1371 CDS gi|512070320|gb|ATBY01000012.1| 68311 66443 -1 - 1869 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.67496.peg.1372 CDS gi|512070320|gb|ATBY01000012.1| 68361 68840 3 + 480 putative ribonuclease - none -
fig|6666666.67496.peg.1373 CDS gi|512070320|gb|ATBY01000012.1| 68859 69188 3 + 330 hypothetical protein - none -
fig|6666666.67496.peg.1374 CDS gi|512070320|gb|ATBY01000012.1| 70425 69181 -3 - 1245 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.67496.peg.1375 CDS gi|512070320|gb|ATBY01000012.1| 70468 72399 1 + 1932 FIG00543878: hypothetical protein - none -
fig|6666666.67496.peg.1376 CDS gi|512070320|gb|ATBY01000012.1| 72959 72507 -2 - 453 FIG00545596: hypothetical protein - none -
fig|6666666.67496.peg.1377 CDS gi|512070320|gb|ATBY01000012.1| 73459 72965 -1 - 495 FIG00544046: hypothetical protein - none -
fig|6666666.67496.peg.1378 CDS gi|512070320|gb|ATBY01000012.1| 74858 73473 -2 - 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67496.peg.1379 CDS gi|512070320|gb|ATBY01000012.1| 75250 75630 1 + 381 transcriptional regulator, ArsR family - none -
fig|6666666.67496.peg.1380 CDS gi|512070320|gb|ATBY01000012.1| 75756 76121 3 + 366 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.67496.peg.1381 CDS gi|512070320|gb|ATBY01000012.1| 77205 76105 -3 - 1101 FIG00544679: hypothetical protein - none -
fig|6666666.67496.peg.1382 CDS gi|512070320|gb|ATBY01000012.1| 77936 77205 -2 - 732 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67496.peg.1383 CDS gi|512070320|gb|ATBY01000012.1| 78730 78005 -1 - 726 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67496.peg.1384 CDS gi|512070320|gb|ATBY01000012.1| 79642 78734 -1 - 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67496.peg.1385 CDS gi|512070320|gb|ATBY01000012.1| 81009 79657 -3 - 1353 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67496.peg.1386 CDS gi|512070320|gb|ATBY01000012.1| 81542 81018 -2 - 525 FIG000233: metal-dependent hydrolase - none -
fig|6666666.67496.peg.1387 CDS gi|512070320|gb|ATBY01000012.1| 82529 81546 -2 - 984 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67496.peg.1388 CDS gi|512070320|gb|ATBY01000012.1| 83297 82575 -2 - 723 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67496.peg.1389 CDS gi|512070320|gb|ATBY01000012.1| 84431 83298 -2 - 1134 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67496.peg.1390 CDS gi|512070320|gb|ATBY01000012.1| 85455 84463 -3 - 993 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67496.peg.1391 CDS gi|512070320|gb|ATBY01000012.1| 85668 86906 3 + 1239 No significant database matches - none -
fig|6666666.67496.peg.1392 CDS gi|512070320|gb|ATBY01000012.1| 88039 86903 -1 - 1137 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.67496.peg.1393 CDS gi|512070320|gb|ATBY01000012.1| 88716 88039 -3 - 678 FIG00543880: hypothetical protein - none -
fig|6666666.67496.peg.1394 CDS gi|512070320|gb|ATBY01000012.1| 90712 88841 -1 - 1872 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.67496.peg.1395 CDS gi|512070320|gb|ATBY01000012.1| 90782 92884 2 + 2103 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67496.peg.1396 CDS gi|512070320|gb|ATBY01000012.1| 92986 92867 -1 - 120 hypothetical protein - none -
fig|6666666.67496.peg.1397 CDS gi|512070320|gb|ATBY01000012.1| 93167 92979 -2 - 189 hypothetical protein - none -
fig|6666666.67496.peg.1398 CDS gi|512070320|gb|ATBY01000012.1| 95222 93168 -2 - 2055 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67496.peg.1399 CDS gi|512070320|gb|ATBY01000012.1| 95223 96575 3 + 1353 FIG00547479: hypothetical protein - none -
fig|6666666.67496.peg.1400 CDS gi|512070320|gb|ATBY01000012.1| 96923 96624 -2 - 300 hypothetical protein - none -
fig|6666666.67496.peg.1401 CDS gi|512070320|gb|ATBY01000012.1| 97207 98943 1 + 1737 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.67496.peg.1402 CDS gi|512070320|gb|ATBY01000012.1| 98940 100100 3 + 1161 uncharacterized protein probably involved in trehalose biosynthesis - none -
fig|6666666.67496.peg.1403 CDS gi|512070320|gb|ATBY01000012.1| 100667 100101 -2 - 567 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.67496.peg.1404 CDS gi|512070320|gb|ATBY01000012.1| 100710 101792 3 + 1083 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67496.peg.1405 CDS gi|512070320|gb|ATBY01000012.1| 101817 103367 3 + 1551 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.67496.peg.1406 CDS gi|512070320|gb|ATBY01000012.1| 104907 103318 -3 - 1590 hypothetical protein - none -
fig|6666666.67496.peg.1407 CDS gi|512070320|gb|ATBY01000012.1| 105490 104888 -1 - 603 hypothetical protein - none -
fig|6666666.67496.peg.1408 CDS gi|512070320|gb|ATBY01000012.1| 106595 106041 -2 - 555 FIG00545146: hypothetical protein - none -
fig|6666666.67496.peg.1409 CDS gi|512070320|gb|ATBY01000012.1| 106698 108587 3 + 1890 putative ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.1410 CDS gi|512070320|gb|ATBY01000012.1| 108605 109732 2 + 1128 Putative aminotransferase - none -
fig|6666666.67496.peg.1411 CDS gi|512070320|gb|ATBY01000012.1| 109929 111335 3 + 1407 branched-chain amino acid permease - none -
fig|6666666.67496.peg.1412 CDS gi|512070320|gb|ATBY01000012.1| 112396 111488 -1 - 909 Auxin Efflux Carrier - none -
fig|6666666.67496.peg.1413 CDS gi|512070320|gb|ATBY01000012.1| 112455 113981 3 + 1527 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.67496.peg.1414 CDS gi|512070320|gb|ATBY01000012.1| 113978 114928 2 + 951 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67496.peg.1415 CDS gi|512070320|gb|ATBY01000012.1| 114925 115740 1 + 816 ABC-type transporter, permease component - none -
fig|6666666.67496.peg.1416 CDS gi|512070320|gb|ATBY01000012.1| 115737 117335 3 + 1599 putative ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.1417 CDS gi|512070320|gb|ATBY01000012.1| 117472 118611 1 + 1140 hypothetical protein - none -
fig|6666666.67496.peg.1418 CDS gi|512070320|gb|ATBY01000012.1| 119544 118612 -3 - 933 ADP-ribosylglycohydrolase - none -
fig|6666666.67496.peg.1419 CDS gi|512070320|gb|ATBY01000012.1| 119760 119590 -3 - 171 hypothetical protein - none -
fig|6666666.67496.peg.1420 CDS gi|512070320|gb|ATBY01000012.1| 119933 121651 2 + 1719 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Respiratory dehydrogenases 1
fig|6666666.67496.peg.1421 CDS gi|512070320|gb|ATBY01000012.1| 121761 122474 3 + 714 Glycerol uptake facilitator protein Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerol fermentation to 1,3-propanediol;
Osmoregulation
fig|6666666.67496.peg.1422 CDS gi|512070320|gb|ATBY01000012.1| 122490 124001 3 + 1512 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.1423 CDS gi|512070320|gb|ATBY01000012.1| 124031 124936 2 + 906 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67496.peg.1424 CDS gi|512070320|gb|ATBY01000012.1| 125059 125565 1 + 507 Putative bacterioferritin - none -
fig|6666666.67496.peg.1425 CDS gi|512070320|gb|ATBY01000012.1| 125666 127513 2 + 1848 High-affinity choline uptake protein BetT Niacin-Choline transport and metabolism
fig|6666666.67496.peg.1426 CDS gi|512070320|gb|ATBY01000012.1| 128805 127516 -3 - 1290 FIG00549989: hypothetical protein - none -
fig|6666666.67496.peg.1427 CDS gi|512070320|gb|ATBY01000012.1| 128957 129685 2 + 729 hypothetical protein - none -
fig|6666666.67496.peg.1428 CDS gi|512070320|gb|ATBY01000012.1| 129735 130298 3 + 564 hypothetical protein - none -
fig|6666666.67496.peg.1429 CDS gi|512070320|gb|ATBY01000012.1| 130319 130531 2 + 213 hypothetical protein - none -
fig|6666666.67496.peg.1430 CDS gi|512070320|gb|ATBY01000012.1| 132545 130692 -2 - 1854 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.67496.peg.1431 CDS gi|512070320|gb|ATBY01000012.1| 132631 133152 1 + 522 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67496.peg.1432 CDS gi|512070320|gb|ATBY01000012.1| 133264 133527 1 + 264 SSU ribosomal protein S20p - none -
fig|6666666.67496.peg.1433 CDS gi|512070320|gb|ATBY01000012.1| 135773 134871 -2 - 903 DNA polymerase II (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67496.peg.1434 CDS gi|512070320|gb|ATBY01000012.1| 137373 135799 -3 - 1575 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.67496.peg.1435 CDS gi|512070320|gb|ATBY01000012.1| 138026 137370 -2 - 657 FIG00545717: hypothetical protein - none -
fig|6666666.67496.peg.1436 CDS gi|512070320|gb|ATBY01000012.1| 138877 138092 -1 - 786 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67496.peg.1437 CDS gi|512070320|gb|ATBY01000012.1| 139440 138874 -3 - 567 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67496.peg.1438 CDS gi|512070320|gb|ATBY01000012.1| 139877 139437 -2 - 441 Iojap protein - none -
fig|6666666.67496.peg.1439 CDS gi|512070320|gb|ATBY01000012.1| 140540 139923 -2 - 618 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67496.peg.1440 CDS gi|512070320|gb|ATBY01000012.1| 141435 140563 -3 - 873 FIG00544655: hypothetical protein - none -
fig|6666666.67496.peg.1441 CDS gi|512070320|gb|ATBY01000012.1| 141633 142796 3 + 1164 hypothetical protein - none -
fig|6666666.67496.peg.1442 CDS gi|512070320|gb|ATBY01000012.1| 143995 142793 -1 - 1203 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67496.peg.1443 CDS gi|512070320|gb|ATBY01000012.1| 145092 144004 -3 - 1089 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.67496.peg.1444 CDS gi|512070320|gb|ATBY01000012.1| 146562 145093 -3 - 1470 COG0536: GTP-binding protein Obg - none -
fig|6666666.67496.peg.1445 CDS gi|512070320|gb|ATBY01000012.1| 146633 146848 2 + 216 hypothetical protein - none -
fig|6666666.67496.peg.1446 CDS gi|512070320|gb|ATBY01000012.1| 147888 146845 -3 - 1044 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67496.peg.1447 CDS gi|512070320|gb|ATBY01000012.1| 148565 148293 -2 - 273 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67496.peg.1448 CDS gi|512070320|gb|ATBY01000012.1| 148888 148583 -1 - 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67496.peg.1449 CDS gi|512070320|gb|ATBY01000012.1| 151884 149044 -3 - 2841 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.67496.peg.1450 CDS gi|512070320|gb|ATBY01000012.1| 152119 152787 1 + 669 hypothetical protein - none -
fig|6666666.67496.peg.1451 CDS gi|512070320|gb|ATBY01000012.1| 153172 152762 -1 - 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.67496.peg.1452 CDS gi|512070320|gb|ATBY01000012.1| 153541 153221 -1 - 321 hypothetical protein - none -
fig|6666666.67496.peg.1453 CDS gi|512070320|gb|ATBY01000012.1| 153952 153542 -1 - 411 Possible membrane protein - none -
fig|6666666.67496.peg.1454 CDS gi|512070320|gb|ATBY01000012.1| 155409 153949 -3 - 1461 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67496.peg.1455 CDS gi|512070320|gb|ATBY01000012.1| 158051 155406 -2 - 2646 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67496.peg.1456 CDS gi|512070470|gb|ATBY01000011.1| 609 202 -3 - 408 FIG017342: transmembrane protein - none -
fig|6666666.67496.peg.1457 CDS gi|512070470|gb|ATBY01000011.1| 1224 811 -3 - 414 No significant database matches - none -
fig|6666666.67496.peg.1458 CDS gi|512070470|gb|ATBY01000011.1| 1676 2389 2 + 714 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67496.peg.1459 CDS gi|512070470|gb|ATBY01000011.1| 2596 3672 1 + 1077 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.67496.peg.1460 CDS gi|512070470|gb|ATBY01000011.1| 3669 5228 3 + 1560 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67496.peg.1461 CDS gi|512070470|gb|ATBY01000011.1| 6292 5492 -1 - 801 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.67496.peg.1462 CDS gi|512070470|gb|ATBY01000011.1| 7284 6289 -3 - 996 ABC-type Fe3+-siderophore transport system, permease 2 component - none -
fig|6666666.67496.peg.1463 CDS gi|512070470|gb|ATBY01000011.1| 8183 7284 -2 - 900 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67496.peg.1464 CDS gi|512070470|gb|ATBY01000011.1| 9063 8707 -3 - 357 putative iron ABC transport system, solute-binding protein - none -
fig|6666666.67496.peg.1465 CDS gi|512070470|gb|ATBY01000011.1| 9510 9073 -3 - 438 putative iron-siderophore binding lipoprotein - none -
fig|6666666.67496.peg.1466 CDS gi|512070470|gb|ATBY01000011.1| 10723 10349 -1 - 375 Conserved hypothetical regulatory protein - none -
fig|6666666.67496.peg.1467 CDS gi|512070470|gb|ATBY01000011.1| 10786 13347 1 + 2562 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67496.peg.1468 CDS gi|512070470|gb|ATBY01000011.1| 14788 13391 -1 - 1398 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67496.peg.1469 CDS gi|512070470|gb|ATBY01000011.1| 15372 14866 -3 - 507 FIG00544385: hypothetical protein - none -
fig|6666666.67496.peg.1470 CDS gi|512070470|gb|ATBY01000011.1| 15474 15629 3 + 156 hypothetical protein - none -
fig|6666666.67496.peg.1471 CDS gi|512070470|gb|ATBY01000011.1| 16373 15639 -2 - 735 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) - none -
fig|6666666.67496.peg.1472 CDS gi|512070470|gb|ATBY01000011.1| 17383 16421 -1 - 963 ROK family protein (putative glucokinase) - none -
fig|6666666.67496.peg.1473 CDS gi|512070470|gb|ATBY01000011.1| 18596 17505 -2 - 1092 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67496.peg.1474 CDS gi|512070470|gb|ATBY01000011.1| 19747 18605 -1 - 1143 NLP/P60 family protein - none -
fig|6666666.67496.peg.1475 CDS gi|512070470|gb|ATBY01000011.1| 20798 20175 -2 - 624 putative secreted protein - none -
fig|6666666.67496.peg.1476 CDS gi|512070470|gb|ATBY01000011.1| 23435 21792 -2 - 1644 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67496.peg.1477 CDS gi|512070470|gb|ATBY01000011.1| 24643 23432 -1 - 1212 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67496.peg.1478 CDS gi|512070470|gb|ATBY01000011.1| 25530 24640 -3 - 891 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67496.peg.1479 CDS gi|512070470|gb|ATBY01000011.1| 26169 25621 -3 - 549 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67496.peg.1480 CDS gi|512070470|gb|ATBY01000011.1| 27157 26726 -1 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67496.peg.1481 CDS gi|512070470|gb|ATBY01000011.1| 28316 27177 -2 - 1140 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67496.peg.1482 CDS gi|512070470|gb|ATBY01000011.1| 29017 30942 1 + 1926 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67496.peg.1483 CDS gi|512070470|gb|ATBY01000011.1| 31370 31029 -2 - 342 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67496.peg.1484 CDS gi|512070470|gb|ATBY01000011.1| 31631 31512 -2 - 120 hypothetical protein - none -
fig|6666666.67496.peg.1485 CDS gi|512070470|gb|ATBY01000011.1| 31683 32435 3 + 753 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67496.peg.1486 CDS gi|512070470|gb|ATBY01000011.1| 32442 33008 3 + 567 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis
fig|6666666.67496.peg.1487 CDS gi|512070470|gb|ATBY01000011.1| 33010 34065 1 + 1056 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis
fig|6666666.67496.peg.1488 CDS gi|512070470|gb|ATBY01000011.1| 34138 34956 1 + 819 Cobalamin synthase - none -
fig|6666666.67496.peg.1489 CDS gi|512070470|gb|ATBY01000011.1| 35133 36176 3 + 1044 FIG00545643: hypothetical protein - none -
fig|6666666.67496.peg.1490 CDS gi|512070470|gb|ATBY01000011.1| 37530 36424 -3 - 1107 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67496.peg.1491 CDS gi|512070470|gb|ATBY01000011.1| 37717 39207 1 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67496.peg.1492 CDS gi|512070470|gb|ATBY01000011.1| 39660 39256 -3 - 405 Putative oxidoreductase - none -
fig|6666666.67496.peg.1493 CDS gi|512070514|gb|ATBY01000010.1| 1171 380 -1 - 792 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67496.peg.1494 CDS gi|512070514|gb|ATBY01000010.1| 1681 1319 -1 - 363 putative transcription regulator - none -
fig|6666666.67496.peg.1495 CDS gi|512070514|gb|ATBY01000010.1| 2300 1728 -2 - 573 Protein Implicated in DNA repair function with RecA and MutS DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.67496.peg.1496 CDS gi|512070514|gb|ATBY01000010.1| 2900 2310 -2 - 591 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) - none -
fig|6666666.67496.peg.1497 CDS gi|512070514|gb|ATBY01000010.1| 3011 3244 2 + 234 hypothetical protein - none -
fig|6666666.67496.peg.1498 CDS gi|512070514|gb|ATBY01000010.1| 4410 3319 -3 - 1092 Integral membrane protein TerC - none -
fig|6666666.67496.peg.1499 CDS gi|512070514|gb|ATBY01000010.1| 4550 4395 -2 - 156 hypothetical protein - none -
fig|6666666.67496.peg.1500 CDS gi|512070514|gb|ATBY01000010.1| 7627 4637 -1 - 2991 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67496.peg.1501 CDS gi|512070514|gb|ATBY01000010.1| 8278 7691 -1 - 588 FIG00544433: hypothetical protein - none -
fig|6666666.67496.peg.1502 CDS gi|512070514|gb|ATBY01000010.1| 10620 8614 -3 - 2007 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.67496.peg.1503 CDS gi|512070514|gb|ATBY01000010.1| 11501 10623 -2 - 879 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67496.peg.1504 CDS gi|512070514|gb|ATBY01000010.1| 12283 11528 -1 - 756 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67496.peg.1505 CDS gi|512070514|gb|ATBY01000010.1| 13027 12287 -1 - 741 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67496.peg.1506 CDS gi|512070514|gb|ATBY01000010.1| 15441 13144 -3 - 2298 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.67496.peg.1507 CDS gi|512070514|gb|ATBY01000010.1| 15607 17037 1 + 1431 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67496.peg.1508 CDS gi|512070514|gb|ATBY01000010.1| 17518 17063 -1 - 456 hypothetical protein - none -
fig|6666666.67496.peg.1509 CDS gi|512070514|gb|ATBY01000010.1| 17709 17518 -3 - 192 hypothetical protein - none -
fig|6666666.67496.peg.1510 CDS gi|512070514|gb|ATBY01000010.1| 19119 18103 -3 - 1017 ABC transporter, ATP-binding/permease protein - none -
fig|6666666.67496.peg.1511 CDS gi|512070514|gb|ATBY01000010.1| 19255 19512 1 + 258 Mobile element protein - none -
fig|6666666.67496.peg.1512 CDS gi|512070514|gb|ATBY01000010.1| 19509 19727 3 + 219 Mobile element protein - none -
fig|6666666.67496.peg.1513 CDS gi|512070514|gb|ATBY01000010.1| 19858 20019 1 + 162 Mobile element protein - none -
fig|6666666.67496.peg.1514 CDS gi|512070514|gb|ATBY01000010.1| 20093 20224 2 + 132 Mobile element protein - none -
fig|6666666.67496.peg.1515 CDS gi|512070514|gb|ATBY01000010.1| 20984 22702 2 + 1719 hypothetical protein - none -
fig|6666666.67496.peg.1516 CDS gi|512070514|gb|ATBY01000010.1| 22702 23928 1 + 1227 hypothetical protein - none -
fig|6666666.67496.peg.1517 CDS gi|512070514|gb|ATBY01000010.1| 24592 24323 -1 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.67496.peg.1518 CDS gi|512070514|gb|ATBY01000010.1| 25673 24735 -2 - 939 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67496.peg.1519 CDS gi|512070514|gb|ATBY01000010.1| 26683 25673 -1 - 1011 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67496.peg.1520 CDS gi|512070514|gb|ATBY01000010.1| 26783 27610 2 + 828 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67496.peg.1521 CDS gi|512070514|gb|ATBY01000010.1| 28342 27689 -1 - 654 4@1-phosphopantetheinyl transferase entD (EC 2.7.8.-) - none -
fig|6666666.67496.peg.1522 CDS gi|512070514|gb|ATBY01000010.1| 29165 28335 -2 - 831 putative SimX4 homolog - none -
fig|6666666.67496.peg.1523 CDS gi|512070514|gb|ATBY01000010.1| 30528 29218 -3 - 1311 putative DNA-damage-inducible protein F - none -
fig|6666666.67496.peg.1524 CDS gi|512070514|gb|ATBY01000010.1| 31886 30903 -2 - 984 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67496.peg.1525 CDS gi|512070514|gb|ATBY01000010.1| 32319 31897 -3 - 423 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67496.peg.1526 CDS gi|512070514|gb|ATBY01000010.1| 35269 32438 -1 - 2832 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67496.peg.1527 CDS gi|512070514|gb|ATBY01000010.1| 35722 35423 -1 - 300 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67496.peg.1528 CDS gi|512070514|gb|ATBY01000010.1| 36990 35998 -3 - 993 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67496.peg.1529 CDS gi|512070514|gb|ATBY01000010.1| 37669 37127 -1 - 543 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.67496.peg.1530 CDS gi|512070514|gb|ATBY01000010.1| 37823 38758 2 + 936 Putative secreted protein - none -
fig|6666666.67496.peg.1531 CDS gi|512070514|gb|ATBY01000010.1| 38911 39657 1 + 747 GntR-family transcriptional regulator - none -
fig|6666666.67496.peg.1532 CDS gi|512070514|gb|ATBY01000010.1| 39743 39856 2 + 114 hypothetical protein - none -
fig|6666666.67496.peg.1533 CDS gi|512070514|gb|ATBY01000010.1| 41615 39846 -2 - 1770 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.67496.peg.1534 CDS gi|512070514|gb|ATBY01000010.1| 43145 41655 -2 - 1491 Putative transmembrane efflux protein - none -
fig|6666666.67496.peg.1535 CDS gi|512070514|gb|ATBY01000010.1| 43933 43142 -1 - 792 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.1536 CDS gi|512070514|gb|ATBY01000010.1| 45438 43948 -3 - 1491 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis
fig|6666666.67496.peg.1537 CDS gi|512070514|gb|ATBY01000010.1| 45956 45432 -2 - 525 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Cobalamin synthesis
fig|6666666.67496.peg.1538 CDS gi|512070514|gb|ATBY01000010.1| 47181 46276 -3 - 906 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.67496.peg.1539 CDS gi|512070514|gb|ATBY01000010.1| 48252 47788 -3 - 465 ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67496.peg.1540 CDS gi|512070514|gb|ATBY01000010.1| 49804 48560 -1 - 1245 ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67496.peg.1541 CDS gi|512070514|gb|ATBY01000010.1| 51346 49811 -1 - 1536 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67496.peg.1542 CDS gi|512070514|gb|ATBY01000010.1| 51966 53045 3 + 1080 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67496.peg.1543 CDS gi|512070514|gb|ATBY01000010.1| 53296 54678 1 + 1383 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67496.peg.1544 CDS gi|512070514|gb|ATBY01000010.1| 54829 56475 1 + 1647 FIG00544164: hypothetical protein - none -
fig|6666666.67496.peg.1545 CDS gi|512070514|gb|ATBY01000010.1| 57970 56546 -1 - 1425 Cobyric acid synthase - none -
fig|6666666.67496.peg.1546 CDS gi|512070514|gb|ATBY01000010.1| 58961 58041 -2 - 921 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67496.peg.1547 CDS gi|512070514|gb|ATBY01000010.1| 58929 59090 3 + 162 hypothetical protein - none -
fig|6666666.67496.peg.1548 CDS gi|512070514|gb|ATBY01000010.1| 59113 61275 1 + 2163 putative secreted protein - none -
fig|6666666.67496.peg.1549 CDS gi|512070514|gb|ATBY01000010.1| 63165 61369 -3 - 1797 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1550 CDS gi|512070514|gb|ATBY01000010.1| 63469 64419 1 + 951 hypothetical protein - none -
fig|6666666.67496.peg.1551 CDS gi|512070514|gb|ATBY01000010.1| 65756 64650 -2 - 1107 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67496.peg.1552 CDS gi|512070514|gb|ATBY01000010.1| 67118 65889 -2 - 1230 Membrane-associated zinc metalloprotease - none -
fig|6666666.67496.peg.1553 CDS gi|512070514|gb|ATBY01000010.1| 68400 67243 -3 - 1158 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67496.peg.1554 CDS gi|512070514|gb|ATBY01000010.1| 69040 69600 1 + 561 hypothetical membrane protein - none -
fig|6666666.67496.peg.1555 CDS gi|512070514|gb|ATBY01000010.1| 70925 69738 -2 - 1188 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67496.peg.1556 CDS gi|512070514|gb|ATBY01000010.1| 71919 71020 -3 - 900 Phosphatidate cytidylyltransferase (EC 2.7.7.41) - none -
fig|6666666.67496.peg.1557 CDS gi|512070514|gb|ATBY01000010.1| 72638 72081 -2 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67496.peg.1558 CDS gi|512070514|gb|ATBY01000010.1| 73571 72834 -2 - 738 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67496.peg.1559 CDS gi|512070514|gb|ATBY01000010.1| 74597 73770 -2 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67496.peg.1560 CDS gi|512070514|gb|ATBY01000010.1| 75678 74794 -3 - 885 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.67496.peg.1561 CDS gi|512070514|gb|ATBY01000010.1| 78171 77257 -3 - 915 Tyrosine recombinase XerC - none -
fig|6666666.67496.peg.1562 CDS gi|512070514|gb|ATBY01000010.1| 79479 78220 -3 - 1260 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67496.peg.1563 CDS gi|512070514|gb|ATBY01000010.1| 81008 79476 -2 - 1533 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67496.peg.1564 CDS gi|512070514|gb|ATBY01000010.1| 81321 80995 -3 - 327 hypothetical protein - none -
fig|6666666.67496.peg.1565 CDS gi|512070514|gb|ATBY01000010.1| 82172 81867 -2 - 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67496.peg.1566 CDS gi|512070514|gb|ATBY01000010.1| 82813 82169 -1 - 645 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.67496.peg.1567 CDS gi|512070514|gb|ATBY01000010.1| 83632 82844 -1 - 789 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67496.peg.1568 CDS gi|512070514|gb|ATBY01000010.1| 84093 83749 -3 - 345 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67496.peg.1569 CDS gi|512070514|gb|ATBY01000010.1| 86586 84211 -3 - 2376 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67496.peg.1570 CDS gi|512070514|gb|ATBY01000010.1| 86539 86718 1 + 180 hypothetical protein - none -
fig|6666666.67496.peg.1571 CDS gi|512070514|gb|ATBY01000010.1| 88064 86823 -2 - 1242 hypothetical protein - none -
fig|6666666.67496.peg.1572 CDS gi|512070514|gb|ATBY01000010.1| 88254 88141 -3 - 114 hypothetical protein - none -
fig|6666666.67496.peg.1573 CDS gi|512070514|gb|ATBY01000010.1| 89872 88649 -1 - 1224 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.67496.peg.1574 CDS gi|512070514|gb|ATBY01000010.1| 90437 89928 -2 - 510 16S rRNA processing protein RimM - none -
fig|6666666.67496.peg.1575 CDS gi|512070514|gb|ATBY01000010.1| 91200 90670 -3 - 531 SSU ribosomal protein S16p - none -
fig|6666666.67496.peg.1576 CDS gi|512070514|gb|ATBY01000010.1| 93226 91586 -1 - 1641 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.67496.peg.1577 CDS gi|512070514|gb|ATBY01000010.1| 93723 93352 -3 - 372 hypothetical protein - none -
fig|6666666.67496.peg.1578 CDS gi|512070514|gb|ATBY01000010.1| 95828 93774 -2 - 2055 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.67496.peg.1579 CDS gi|512070514|gb|ATBY01000010.1| 99588 96094 -3 - 3495 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.67496.peg.1580 CDS gi|512070514|gb|ATBY01000010.1| 101701 99770 -1 - 1932 hypothetical protein - none -
fig|6666666.67496.peg.1581 CDS gi|512070514|gb|ATBY01000010.1| 105305 101859 -2 - 3447 Chromosome partition protein smc - none -
fig|6666666.67496.peg.1582 CDS gi|512070514|gb|ATBY01000010.1| 105613 107487 1 + 1875 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67496.peg.1583 CDS gi|512070514|gb|ATBY01000010.1| 107906 107688 -2 - 219 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67496.peg.1584 CDS gi|512070514|gb|ATBY01000010.1| 108012 109193 3 + 1182 putative transport protein - none -
fig|6666666.67496.peg.1585 CDS gi|512070514|gb|ATBY01000010.1| 110014 109187 -1 - 828 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67496.peg.1586 CDS gi|512070514|gb|ATBY01000010.1| 110750 109992 -2 - 759 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67496.peg.1587 CDS gi|512070514|gb|ATBY01000010.1| 111280 110747 -1 - 534 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67496.peg.1588 CDS gi|512070514|gb|ATBY01000010.1| 112006 111293 -1 - 714 Cell division initiation protein - none -
fig|6666666.67496.peg.1589 CDS gi|512070514|gb|ATBY01000010.1| 113654 112308 -2 - 1347 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67496.peg.1590 CDS gi|512070514|gb|ATBY01000010.1| 113939 114889 2 + 951 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67496.peg.1591 CDS gi|512070514|gb|ATBY01000010.1| 115259 114855 -2 - 405 FIG00544156: hypothetical protein - none -
fig|6666666.67496.peg.1592 CDS gi|512070514|gb|ATBY01000010.1| 115331 116614 2 + 1284 No significant database matches - none -
fig|6666666.67496.peg.1593 CDS gi|512070514|gb|ATBY01000010.1| 116621 117838 2 + 1218 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.1594 CDS gi|512070514|gb|ATBY01000010.1| 118204 118392 1 + 189 hypothetical protein - none -
fig|6666666.67496.peg.1595 CDS gi|512070514|gb|ATBY01000010.1| 119844 118447 -3 - 1398 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67496.peg.1596 CDS gi|512070514|gb|ATBY01000010.1| 120874 119999 -1 - 876 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67496.peg.1597 CDS gi|512070514|gb|ATBY01000010.1| 121730 120921 -2 - 810 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67496.peg.1598 CDS gi|512070514|gb|ATBY01000010.1| 122447 121851 -2 - 597 FIG00545012: hypothetical protein - none -
fig|6666666.67496.peg.1599 CDS gi|512070514|gb|ATBY01000010.1| 123596 122499 -2 - 1098 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67496.peg.1600 CDS gi|512070514|gb|ATBY01000010.1| 124428 123601 -3 - 828 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67496.peg.1601 CDS gi|512070514|gb|ATBY01000010.1| 125168 124434 -2 - 735 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.67496.peg.1602 CDS gi|512070514|gb|ATBY01000010.1| 125815 125183 -1 - 633 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67496.peg.1603 CDS gi|512070514|gb|ATBY01000010.1| 127045 125828 -1 - 1218 putative transport protein - none -
fig|6666666.67496.peg.1604 CDS gi|512070514|gb|ATBY01000010.1| 128461 127268 -1 - 1194 hypothetical protein - none -
fig|6666666.67496.peg.1605 CDS gi|512070514|gb|ATBY01000010.1| 128730 128569 -3 - 162 FIG00544135: hypothetical protein - none -
fig|6666666.67496.peg.1606 CDS gi|512070514|gb|ATBY01000010.1| 129384 128734 -3 - 651 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67496.peg.1607 CDS gi|512070514|gb|ATBY01000010.1| 130447 129377 -1 - 1071 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67496.peg.1608 CDS gi|512070514|gb|ATBY01000010.1| 131751 130447 -3 - 1305 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67496.peg.1609 CDS gi|512070514|gb|ATBY01000010.1| 132505 131990 -1 - 516 hypothetical protein - none -
fig|6666666.67496.peg.1610 CDS gi|512070514|gb|ATBY01000010.1| 133138 132524 -1 - 615 FIG00545144: hypothetical protein - none -
fig|6666666.67496.peg.1611 CDS gi|512070514|gb|ATBY01000010.1| 133572 134174 3 + 603 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.67496.peg.1612 CDS gi|512070514|gb|ATBY01000010.1| 134487 136742 3 + 2256 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67496.peg.1613 CDS gi|512070514|gb|ATBY01000010.1| 136910 138241 2 + 1332 DNA polymerase III epsilon subunit (EC 2.7.7.7) - none -
fig|6666666.67496.peg.1614 CDS gi|512070514|gb|ATBY01000010.1| 138370 138510 1 + 141 hypothetical protein - none -
fig|6666666.67496.peg.1615 CDS gi|512070514|gb|ATBY01000010.1| 138515 139087 2 + 573 hypothetical protein - none -
fig|6666666.67496.peg.1616 CDS gi|512070514|gb|ATBY01000010.1| 139157 141676 2 + 2520 Malto-oligosyltrehalose synthase (EC 5.4.99.15) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.67496.peg.1617 CDS gi|512070514|gb|ATBY01000010.1| 141669 142679 3 + 1011 FIG00544169: hypothetical protein - none -
fig|6666666.67496.peg.1618 CDS gi|512070514|gb|ATBY01000010.1| 142738 142872 1 + 135 FIG00544735: hypothetical protein - none -
fig|6666666.67496.peg.1619 CDS gi|512070514|gb|ATBY01000010.1| 143394 142996 -3 - 399 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67496.peg.1620 CDS gi|512070514|gb|ATBY01000010.1| 143636 143403 -2 - 234 FIG00544856: hypothetical protein - none -
fig|6666666.67496.peg.1621 CDS gi|512070514|gb|ATBY01000010.1| 144308 143658 -2 - 651 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.67496.peg.1622 CDS gi|512070514|gb|ATBY01000010.1| 144439 146115 1 + 1677 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) Trehalose Biosynthesis
fig|6666666.67496.peg.1623 CDS gi|512070514|gb|ATBY01000010.1| 146099 146431 2 + 333 hypothetical protein - none -
fig|6666666.67496.peg.1624 CDS gi|512070514|gb|ATBY01000010.1| 147761 146439 -2 - 1323 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67496.peg.1625 CDS gi|512070514|gb|ATBY01000010.1| 147932 149785 2 + 1854 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.67496.peg.1626 CDS gi|512070514|gb|ATBY01000010.1| 150819 150508 -3 - 312 hypothetical protein - none -
fig|6666666.67496.peg.1627 CDS gi|512070514|gb|ATBY01000010.1| 150983 151135 2 + 153 hypothetical protein - none -
fig|6666666.67496.peg.1628 CDS gi|512070514|gb|ATBY01000010.1| 152396 151197 -2 - 1200 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.67496.peg.1629 CDS gi|512070514|gb|ATBY01000010.1| 156267 152704 -3 - 3564 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67496.peg.1630 CDS gi|512070514|gb|ATBY01000010.1| 156494 157366 2 + 873 Protein rarD - none -
fig|6666666.67496.peg.1631 CDS gi|512070514|gb|ATBY01000010.1| 157953 157480 -3 - 474 hypothetical protein - none -
fig|6666666.67496.peg.1632 CDS gi|512070514|gb|ATBY01000010.1| 158923 158003 -1 - 921 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67496.peg.1633 CDS gi|512070514|gb|ATBY01000010.1| 159426 158920 -3 - 507 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67496.peg.1634 CDS gi|512070514|gb|ATBY01000010.1| 159616 159503 -1 - 114 hypothetical protein - none -
fig|6666666.67496.peg.1635 CDS gi|512070514|gb|ATBY01000010.1| 159662 160627 2 + 966 FIG00544955: hypothetical protein - none -
fig|6666666.67496.peg.1636 CDS gi|512070514|gb|ATBY01000010.1| 161048 162715 2 + 1668 putative ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.1637 CDS gi|512070514|gb|ATBY01000010.1| 163505 162825 -2 - 681 Putative secreted protein - none -
fig|6666666.67496.peg.1638 CDS gi|512070514|gb|ATBY01000010.1| 163934 164872 2 + 939 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67496.peg.1639 CDS gi|512070514|gb|ATBY01000010.1| 166447 165080 -1 - 1368 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67496.peg.1640 CDS gi|512070514|gb|ATBY01000010.1| 167981 166584 -2 - 1398 L-asparagine permease - none -
fig|6666666.67496.peg.1641 CDS gi|512070514|gb|ATBY01000010.1| 168844 168017 -1 - 828 permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.67496.peg.1642 CDS gi|512070514|gb|ATBY01000010.1| 172273 169097 -1 - 3177 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67496.peg.1643 CDS gi|512070514|gb|ATBY01000010.1| 172328 172612 2 + 285 hypothetical protein - none -
fig|6666666.67496.peg.1644 CDS gi|512070514|gb|ATBY01000010.1| 173625 172723 -3 - 903 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67496.peg.1645 CDS gi|512070514|gb|ATBY01000010.1| 174161 173871 -2 - 291 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67496.peg.1646 CDS gi|512070514|gb|ATBY01000010.1| 174684 174277 -3 - 408 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67496.peg.1647 CDS gi|512070514|gb|ATBY01000010.1| 175488 174787 -3 - 702 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67496.peg.1648 CDS gi|512070514|gb|ATBY01000010.1| 176368 175589 -1 - 780 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67496.peg.1649 CDS gi|512070514|gb|ATBY01000010.1| 177709 176396 -1 - 1314 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67496.peg.1650 CDS gi|512070514|gb|ATBY01000010.1| 178623 177976 -3 - 648 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67496.peg.1651 CDS gi|512070514|gb|ATBY01000010.1| 180304 178811 -1 - 1494 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67496.peg.1652 CDS gi|512070514|gb|ATBY01000010.1| 181411 180305 -1 - 1107 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1653 CDS gi|512070514|gb|ATBY01000010.1| 183024 181408 -3 - 1617 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67496.peg.1654 CDS gi|512070514|gb|ATBY01000010.1| 184646 183165 -2 - 1482 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67496.peg.1655 CDS gi|512070514|gb|ATBY01000010.1| 186306 185191 -3 - 1116 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1656 CDS gi|512070514|gb|ATBY01000010.1| 187847 186312 -2 - 1536 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67496.peg.1657 CDS gi|512070514|gb|ATBY01000010.1| 189481 187925 -1 - 1557 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67496.peg.1658 CDS gi|512070514|gb|ATBY01000010.1| 191475 189595 -3 - 1881 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67496.peg.1659 CDS gi|512070514|gb|ATBY01000010.1| 192359 191658 -2 - 702 FIG00544004: hypothetical protein - none -
fig|6666666.67496.peg.1660 CDS gi|512070514|gb|ATBY01000010.1| 193618 192467 -1 - 1152 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67496.peg.1661 CDS gi|512070514|gb|ATBY01000010.1| 194225 193794 -2 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67496.peg.1662 CDS gi|512070728|gb|ATBY01000009.1| 1084 2103 1 + 1020 TPR-repeat-containing protein - none -
fig|6666666.67496.peg.1663 CDS gi|512070728|gb|ATBY01000009.1| 2104 3087 1 + 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67496.peg.1664 CDS gi|512070728|gb|ATBY01000009.1| 3078 3287 3 + 210 hypothetical protein - none -
fig|6666666.67496.peg.1665 CDS gi|512070728|gb|ATBY01000009.1| 3518 4330 2 + 813 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67496.peg.1666 CDS gi|512070728|gb|ATBY01000009.1| 4327 5178 1 + 852 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67496.peg.1667 CDS gi|512070728|gb|ATBY01000009.1| 5261 6931 2 + 1671 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67496.peg.1668 CDS gi|512070728|gb|ATBY01000009.1| 7026 8201 3 + 1176 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67496.peg.1669 CDS gi|512070728|gb|ATBY01000009.1| 8217 9245 3 + 1029 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67496.peg.1670 CDS gi|512070728|gb|ATBY01000009.1| 9245 9865 2 + 621 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67496.peg.1671 CDS gi|512070728|gb|ATBY01000009.1| 9862 10764 1 + 903 Tyrosine recombinase XerD - none -
fig|6666666.67496.peg.1672 CDS gi|512070728|gb|ATBY01000009.1| 11091 12065 3 + 975 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67496.peg.1673 CDS gi|512070728|gb|ATBY01000009.1| 12062 12910 2 + 849 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67496.peg.1674 CDS gi|512070728|gb|ATBY01000009.1| 13318 13848 1 + 531 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67496.peg.1675 CDS gi|512070728|gb|ATBY01000009.1| 14278 15318 1 + 1041 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67496.peg.1676 CDS gi|512070728|gb|ATBY01000009.1| 15315 15977 3 + 663 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.67496.peg.1677 CDS gi|512070728|gb|ATBY01000009.1| 15974 17587 2 + 1614 GTP-binding protein EngA - none -
fig|6666666.67496.peg.1678 CDS gi|512070728|gb|ATBY01000009.1| 17809 18777 1 + 969 Deoxyribonucleoside regulator DeoR (transcriptional repressor) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67496.peg.1679 CDS gi|512070728|gb|ATBY01000009.1| 19726 18839 -1 - 888 Spermidine synthase-like protein - none -
fig|6666666.67496.peg.1680 CDS gi|512070728|gb|ATBY01000009.1| 20855 19728 -2 - 1128 Sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein - none -
fig|6666666.67496.peg.1681 CDS gi|512070728|gb|ATBY01000009.1| 22160 20964 -2 - 1197 Sulfolipid (UDP-sulfoquinovose) biosynthesis protein - none -
fig|6666666.67496.peg.1682 CDS gi|512070728|gb|ATBY01000009.1| 24092 22557 -2 - 1536 amino acid carrier protein - none -
fig|6666666.67496.peg.1683 CDS gi|512070728|gb|ATBY01000009.1| 24339 24815 3 + 477 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.67496.peg.1684 CDS gi|512070728|gb|ATBY01000009.1| 25807 25124 -1 - 684 putative secreted lipase - none -
fig|6666666.67496.peg.1685 CDS gi|512070728|gb|ATBY01000009.1| 25823 26311 2 + 489 hypothetical protein - none -
fig|6666666.67496.peg.1686 CDS gi|512070728|gb|ATBY01000009.1| 27406 26918 -1 - 489 Resolvase - none -
fig|6666666.67496.peg.1687 CDS gi|512070728|gb|ATBY01000009.1| 31664 30486 -2 - 1179 putative integrase - none -
fig|6666666.67496.peg.1688 CDS gi|512070728|gb|ATBY01000009.1| 33137 31911 -2 - 1227 hydrolase of the alpha/beta superfamily - none -
fig|6666666.67496.peg.1689 CDS gi|512070728|gb|ATBY01000009.1| 33560 33682 2 + 123 hypothetical protein - none -
fig|6666666.67496.peg.1690 CDS gi|512070728|gb|ATBY01000009.1| 33731 36010 2 + 2280 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67496.peg.1691 CDS gi|512070728|gb|ATBY01000009.1| 36377 36805 2 + 429 FIG00672531: hypothetical protein - none -
fig|6666666.67496.peg.1692 CDS gi|512070728|gb|ATBY01000009.1| 37257 38009 3 + 753 FIG00545122: hypothetical protein - none -
fig|6666666.67496.peg.1693 CDS gi|512070728|gb|ATBY01000009.1| 38018 38620 2 + 603 FIG00544095: hypothetical protein - none -
fig|6666666.67496.peg.1694 CDS gi|512070728|gb|ATBY01000009.1| 38825 39373 2 + 549 FIG00544641: hypothetical protein - none -
fig|6666666.67496.peg.1695 CDS gi|512070728|gb|ATBY01000009.1| 41178 39700 -3 - 1479 Putative secreted protein - none -
fig|6666666.67496.peg.1696 CDS gi|512070728|gb|ATBY01000009.1| 42229 41291 -1 - 939 FIG00545058: hypothetical protein - none -
fig|6666666.67496.peg.1697 CDS gi|512070728|gb|ATBY01000009.1| 43253 42210 -2 - 1044 FIG00546228: hypothetical protein - none -
fig|6666666.67496.peg.1698 CDS gi|512070728|gb|ATBY01000009.1| 44636 43254 -2 - 1383 FIG01282800: hypothetical protein - none -
fig|6666666.67496.peg.1699 CDS gi|512070728|gb|ATBY01000009.1| 46197 44728 -3 - 1470 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67496.peg.1700 CDS gi|512070728|gb|ATBY01000009.1| 46310 46771 2 + 462 ComA operon protein 2 - none -
fig|6666666.67496.peg.1701 CDS gi|512070728|gb|ATBY01000009.1| 48160 46850 -1 - 1311 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67496.peg.1702 CDS gi|512070728|gb|ATBY01000009.1| 48318 48965 3 + 648 SAM-dependent methyltransferases - none -
fig|6666666.67496.peg.1703 CDS gi|512070728|gb|ATBY01000009.1| 49831 48962 -1 - 870 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.67496.peg.1704 CDS gi|512070728|gb|ATBY01000009.1| 50253 50038 -3 - 216 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.67496.peg.1705 CDS gi|512070728|gb|ATBY01000009.1| 52453 50348 -1 - 2106 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.67496.peg.1706 CDS gi|512070728|gb|ATBY01000009.1| 53395 54651 1 + 1257 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67496.peg.1707 CDS gi|512070728|gb|ATBY01000009.1| 54721 55221 1 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.67496.peg.1708 CDS gi|512070728|gb|ATBY01000009.1| 55286 56053 2 + 768 hypothetical protein - none -
fig|6666666.67496.peg.1709 CDS gi|512070728|gb|ATBY01000009.1| 56563 56399 -1 - 165 FIG00546418: hypothetical protein - none -
fig|6666666.67496.peg.1710 CDS gi|512070728|gb|ATBY01000009.1| 57265 56570 -1 - 696 Putative secreted protein - none -
fig|6666666.67496.peg.1711 CDS gi|512070728|gb|ATBY01000009.1| 57449 57279 -2 - 171 hypothetical protein - none -
fig|6666666.67496.peg.1712 CDS gi|512070728|gb|ATBY01000009.1| 57743 58129 2 + 387 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67496.peg.1713 CDS gi|512070728|gb|ATBY01000009.1| 58976 58179 -2 - 798 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67496.peg.1714 CDS gi|512070728|gb|ATBY01000009.1| 60522 58987 -3 - 1536 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67496.peg.1715 CDS gi|512070728|gb|ATBY01000009.1| 61055 60519 -2 - 537 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67496.peg.1716 CDS gi|512070728|gb|ATBY01000009.1| 64799 61167 -2 - 3633 CobN component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67496.peg.1717 CDS gi|512070728|gb|ATBY01000009.1| 65859 64810 -3 - 1050 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67496.peg.1718 CDS gi|512070728|gb|ATBY01000009.1| 66169 67326 1 + 1158 Cobalamin biosynthesis protein CobG - none -
fig|6666666.67496.peg.1719 CDS gi|512070728|gb|ATBY01000009.1| 67333 67971 1 + 639 Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis
fig|6666666.67496.peg.1720 CDS gi|512070728|gb|ATBY01000009.1| 67968 69485 3 + 1518 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) / Cobalt-precorrin-3b C17-methyltransferase Cobalamin synthesis;
Cobalamin synthesis
fig|6666666.67496.peg.1721 CDS gi|512070728|gb|ATBY01000009.1| 69531 69890 3 + 360 hypothetical protein - none -
fig|6666666.67496.peg.1722 CDS gi|512070728|gb|ATBY01000009.1| 70629 69853 -3 - 777 Cobalt-precorrin-6x reductase (EC 1.3.1.54) Cobalamin synthesis
fig|6666666.67496.peg.1723 CDS gi|512070728|gb|ATBY01000009.1| 71390 70617 -2 - 774 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis
fig|6666666.67496.peg.1724 CDS gi|512070728|gb|ATBY01000009.1| 72580 71387 -1 - 1194 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.67496.peg.1725 CDS gi|512070728|gb|ATBY01000009.1| 73701 72577 -3 - 1125 probable metallopeptidase - none -
fig|6666666.67496.peg.1726 CDS gi|512070728|gb|ATBY01000009.1| 73714 74367 1 + 654 FIG00545318: hypothetical protein - none -
fig|6666666.67496.peg.1727 CDS gi|512070728|gb|ATBY01000009.1| 75503 74364 -2 - 1140 No significant database matches - none -
fig|6666666.67496.peg.1728 CDS gi|512070728|gb|ATBY01000009.1| 78278 75639 -2 - 2640 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67496.peg.1729 CDS gi|512070728|gb|ATBY01000009.1| 79346 78288 -2 - 1059 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67496.peg.1730 CDS gi|512070728|gb|ATBY01000009.1| 79619 79347 -2 - 273 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67496.peg.1731 CDS gi|512070728|gb|ATBY01000009.1| 80611 79640 -1 - 972 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67496.peg.1732 CDS gi|512070728|gb|ATBY01000009.1| 81564 80611 -3 - 954 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67496.peg.1733 CDS gi|512070728|gb|ATBY01000009.1| 82958 81543 -2 - 1416 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67496.peg.1734 CDS gi|512070728|gb|ATBY01000009.1| 83152 82964 -1 - 189 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67496.peg.1735 CDS gi|512070728|gb|ATBY01000009.1| 84768 83215 -3 - 1554 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67496.peg.1736 CDS gi|512070728|gb|ATBY01000009.1| 86317 84830 -1 - 1488 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67496.peg.1737 CDS gi|512070728|gb|ATBY01000009.1| 87317 86481 -2 - 837 RNA methyltransferase - none -
fig|6666666.67496.peg.1738 CDS gi|512070728|gb|ATBY01000009.1| 87911 87318 -2 - 594 hypothetical protein - none -
fig|6666666.67496.peg.1739 CDS gi|512070728|gb|ATBY01000009.1| 89198 87924 -2 - 1275 aspartyl aminopeptidase - none -
fig|6666666.67496.peg.1740 CDS gi|512070728|gb|ATBY01000009.1| 89280 90119 3 + 840 RecB family exonuclease - none -
fig|6666666.67496.peg.1741 CDS gi|512070728|gb|ATBY01000009.1| 91877 90201 -2 - 1677 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67496.peg.1742 CDS gi|512070728|gb|ATBY01000009.1| 93757 92315 -1 - 1443 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67496.peg.1743 CDS gi|512070728|gb|ATBY01000009.1| 95420 94110 -2 - 1311 C4-dicarboxylate transporter DcuA - none -
fig|6666666.67496.peg.1744 CDS gi|512070728|gb|ATBY01000009.1| 96436 97767 1 + 1332 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.67496.peg.1745 CDS gi|512070728|gb|ATBY01000009.1| 97790 99124 2 + 1335 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.67496.peg.1746 CDS gi|512070728|gb|ATBY01000009.1| 100034 99189 -2 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67496.peg.1747 CDS gi|512070728|gb|ATBY01000009.1| 100352 100089 -2 - 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67496.peg.1748 CDS gi|512070728|gb|ATBY01000009.1| 101188 100496 -1 - 693 Putative hydrolase - none -
fig|6666666.67496.peg.1749 CDS gi|512070728|gb|ATBY01000009.1| 102552 101308 -3 - 1245 hypothetical protein - none -
fig|6666666.67496.peg.1750 CDS gi|512070728|gb|ATBY01000009.1| 103038 102676 -3 - 363 FIG00543988: hypothetical protein - none -
fig|6666666.67496.peg.1751 CDS gi|512070728|gb|ATBY01000009.1| 104400 103132 -3 - 1269 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67496.peg.1752 CDS gi|512070728|gb|ATBY01000009.1| 105324 104449 -3 - 876 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67496.peg.1753 CDS gi|512070728|gb|ATBY01000009.1| 105452 106567 2 + 1116 FIG00545923: hypothetical protein - none -
fig|6666666.67496.peg.1754 CDS gi|512070728|gb|ATBY01000009.1| 106801 107910 1 + 1110 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.1755 CDS gi|512070728|gb|ATBY01000009.1| 108556 108014 -1 - 543 Phospholipid-binding protein - none -
fig|6666666.67496.peg.1756 CDS gi|512070728|gb|ATBY01000009.1| 108966 109601 3 + 636 FIG00544509: hypothetical protein - none -
fig|6666666.67496.peg.1757 CDS gi|512070728|gb|ATBY01000009.1| 110181 109756 -3 - 426 Mannose-6-phosphate isomerase - none -
fig|6666666.67496.peg.1758 CDS gi|512070728|gb|ATBY01000009.1| 111686 110580 -2 - 1107 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67496.peg.1759 CDS gi|512070728|gb|ATBY01000009.1| 114220 111992 -1 - 2229 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67496.peg.1760 CDS gi|512070728|gb|ATBY01000009.1| 116097 114238 -3 - 1860 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Serine-glyoxylate cycle
fig|6666666.67496.peg.1761 CDS gi|512070728|gb|ATBY01000009.1| 116550 117311 3 + 762 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.67496.peg.1762 CDS gi|512070728|gb|ATBY01000009.1| 117471 118031 3 + 561 FIG00545282: hypothetical protein - none -
fig|6666666.67496.peg.1763 CDS gi|512070728|gb|ATBY01000009.1| 119400 118078 -3 - 1323 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67496.peg.1764 CDS gi|512070728|gb|ATBY01000009.1| 119971 119528 -1 - 444 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.67496.peg.1765 CDS gi|512070728|gb|ATBY01000009.1| 120872 120039 -2 - 834 FIG00544636: hypothetical protein - none -
fig|6666666.67496.peg.1766 CDS gi|512070728|gb|ATBY01000009.1| 120994 121779 1 + 786 FIG00543977: hypothetical protein - none -
fig|6666666.67496.peg.1767 CDS gi|512070728|gb|ATBY01000009.1| 122956 121868 -1 - 1089 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.1768 CDS gi|512070728|gb|ATBY01000009.1| 125308 123542 -1 - 1767 cell wall-associated hydrolase - none -
fig|6666666.67496.peg.1769 CDS gi|512070728|gb|ATBY01000009.1| 127439 126954 -2 - 486 FIG00545300: hypothetical protein - none -
fig|6666666.67496.peg.1770 CDS gi|512070728|gb|ATBY01000009.1| 128252 131065 2 + 2814 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67496.peg.1771 CDS gi|512070728|gb|ATBY01000009.1| 131301 131882 3 + 582 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.1772 CDS gi|512070728|gb|ATBY01000009.1| 131961 132689 3 + 729 GMP synthase - none -
fig|6666666.67496.peg.1773 CDS gi|512070728|gb|ATBY01000009.1| 132834 134285 3 + 1452 Lysine-specific permease - none -
fig|6666666.67496.peg.1774 CDS gi|512070728|gb|ATBY01000009.1| 135014 134499 -2 - 516 hypothetical protein - none -
fig|6666666.67496.peg.1775 CDS gi|512070728|gb|ATBY01000009.1| 135097 135366 1 + 270 ACT domain protein - none -
fig|6666666.67496.peg.1776 CDS gi|512070728|gb|ATBY01000009.1| 135380 136765 2 + 1386 FIG00848225: hypothetical protein - none -
fig|6666666.67496.peg.1777 CDS gi|512070728|gb|ATBY01000009.1| 138319 136994 -1 - 1326 Endoglycoceramidase II (EC 3.2.1.123) - none -
fig|6666666.67496.peg.1778 CDS gi|512070728|gb|ATBY01000009.1| 140578 139022 -1 - 1557 ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.1779 CDS gi|512070728|gb|ATBY01000009.1| 140663 141757 2 + 1095 hypothetical protein - none -
fig|6666666.67496.peg.1780 CDS gi|512070728|gb|ATBY01000009.1| 141754 144372 1 + 2619 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67496.peg.1781 CDS gi|512070728|gb|ATBY01000009.1| 146549 144537 -2 - 2013 Na+/H+ antiporter - none -
fig|6666666.67496.peg.1782 CDS gi|512070728|gb|ATBY01000009.1| 148059 146884 -3 - 1176 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.67496.peg.1783 CDS gi|512070728|gb|ATBY01000009.1| 149962 148301 -1 - 1662 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.67496.peg.1784 CDS gi|512070728|gb|ATBY01000009.1| 150977 150258 -2 - 720 Transcriptional regulator, IclR family - none -
fig|6666666.67496.peg.1785 CDS gi|512070728|gb|ATBY01000009.1| 151009 151971 1 + 963 Formiminoglutamase (EC 3.5.3.8) Histidine Degradation
fig|6666666.67496.peg.1786 CDS gi|512070728|gb|ATBY01000009.1| 153639 152101 -3 - 1539 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.67496.peg.1787 CDS gi|512070728|gb|ATBY01000009.1| 154686 154207 -3 - 480 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67496.peg.1788 CDS gi|512070728|gb|ATBY01000009.1| 155157 154723 -3 - 435 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67496.peg.1789 CDS gi|512070728|gb|ATBY01000009.1| 156422 155160 -2 - 1263 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67496.peg.1790 CDS gi|512070728|gb|ATBY01000009.1| 157304 156546 -2 - 759 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67496.peg.1791 CDS gi|512070728|gb|ATBY01000009.1| 158551 157370 -1 - 1182 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67496.peg.1792 CDS gi|512070728|gb|ATBY01000009.1| 159988 158555 -1 - 1434 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67496.peg.1793 CDS gi|512070728|gb|ATBY01000009.1| 160647 159985 -3 - 663 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67496.peg.1794 CDS gi|512070728|gb|ATBY01000009.1| 161186 162967 2 + 1782 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67496.peg.1795 CDS gi|512070728|gb|ATBY01000009.1| 163275 164375 3 + 1101 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67496.peg.1796 CDS gi|512070728|gb|ATBY01000009.1| 164382 165203 3 + 822 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67496.peg.1797 CDS gi|512070728|gb|ATBY01000009.1| 166143 166832 3 + 690 Cytochrome oxidase assembly protein - none -
fig|6666666.67496.peg.1798 CDS gi|512070728|gb|ATBY01000009.1| 166858 167826 1 + 969 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67496.peg.1799 CDS gi|512070728|gb|ATBY01000009.1| 167827 168462 1 + 636 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.67496.peg.1800 CDS gi|512070728|gb|ATBY01000009.1| 169560 168712 -3 - 849 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67496.peg.1801 CDS gi|512070728|gb|ATBY01000009.1| 170109 172226 3 + 2118 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67496.peg.1802 CDS gi|512070728|gb|ATBY01000009.1| 172227 173309 3 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.67496.peg.1803 CDS gi|512070728|gb|ATBY01000009.1| 173703 175223 3 + 1521 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67496.peg.1804 CDS gi|512070728|gb|ATBY01000009.1| 175275 176252 3 + 978 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67496.peg.1805 CDS gi|512070728|gb|ATBY01000009.1| 176274 177008 3 + 735 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67496.peg.1806 CDS gi|512070728|gb|ATBY01000009.1| 178279 177068 -1 - 1212 hypothetical protein - none -
fig|6666666.67496.peg.1807 CDS gi|512070728|gb|ATBY01000009.1| 179151 178276 -3 - 876 hypothetical protein - none -
fig|6666666.67496.peg.1808 CDS gi|512070728|gb|ATBY01000009.1| 179699 179463 -2 - 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67496.peg.1809 CDS gi|512070728|gb|ATBY01000009.1| 180151 180333 1 + 183 Gentisate 1,2-dioxygenase (EC 1.13.11.4) Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67496.peg.1810 CDS gi|512070728|gb|ATBY01000009.1| 180299 180493 2 + 195 Gentisate 1,2-dioxygenase (EC 1.13.11.4) Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67496.peg.1811 CDS gi|512070728|gb|ATBY01000009.1| 180496 181323 1 + 828 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67496.peg.1812 CDS gi|512070728|gb|ATBY01000009.1| 181323 182063 3 + 741 Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4) Glutathione analogs: mycothiol
fig|6666666.67496.peg.1813 CDS gi|512070728|gb|ATBY01000009.1| 183001 182246 -1 - 756 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67496.peg.1814 CDS gi|512070728|gb|ATBY01000009.1| 184222 183005 -1 - 1218 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67496.peg.1815 CDS gi|512070728|gb|ATBY01000009.1| 185495 184488 -2 - 1008 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67496.peg.1816 CDS gi|512070728|gb|ATBY01000009.1| 185623 185739 1 + 117 hypothetical protein - none -
fig|6666666.67496.peg.1817 CDS gi|512070728|gb|ATBY01000009.1| 187161 186199 -3 - 963 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.67496.peg.1818 CDS gi|512070728|gb|ATBY01000009.1| 188193 187219 -3 - 975 Hypothetical protein UPF0052 - none -
fig|6666666.67496.peg.1819 CDS gi|512070728|gb|ATBY01000009.1| 189243 188329 -3 - 915 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.67496.peg.1820 CDS gi|512070728|gb|ATBY01000009.1| 191367 189424 -3 - 1944 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67496.peg.1821 CDS gi|512070728|gb|ATBY01000009.1| 191344 191565 1 + 222 hypothetical protein - none -
fig|6666666.67496.peg.1822 CDS gi|512070728|gb|ATBY01000009.1| 192243 191659 -3 - 585 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67496.peg.1823 CDS gi|512070728|gb|ATBY01000009.1| 192774 192283 -3 - 492 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.67496.peg.1824 CDS gi|512070728|gb|ATBY01000009.1| 194169 192874 -3 - 1296 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67496.peg.1825 CDS gi|512070728|gb|ATBY01000009.1| 194827 194180 -1 - 648 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67496.peg.1826 CDS gi|512070728|gb|ATBY01000009.1| 195900 194809 -3 - 1092 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67496.peg.1827 CDS gi|512070728|gb|ATBY01000009.1| 196562 195897 -2 - 666 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67496.peg.1828 CDS gi|512070728|gb|ATBY01000009.1| 198583 196607 -1 - 1977 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.67496.peg.1829 CDS gi|512070728|gb|ATBY01000009.1| 199562 198600 -2 - 963 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67496.peg.1830 CDS gi|512070728|gb|ATBY01000009.1| 200194 199682 -1 - 513 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67496.peg.1831 CDS gi|512070728|gb|ATBY01000009.1| 203252 200520 -2 - 2733 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67496.peg.1832 CDS gi|512070728|gb|ATBY01000009.1| 204464 203259 -2 - 1206 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67496.peg.1833 CDS gi|512070728|gb|ATBY01000009.1| 205861 204587 -1 - 1275 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67496.peg.1834 CDS gi|512070728|gb|ATBY01000009.1| 206603 206328 -2 - 276 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67496.peg.1835 CDS gi|512070728|gb|ATBY01000009.1| 207137 206784 -2 - 354 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67496.peg.1836 CDS gi|512070728|gb|ATBY01000009.1| 207686 207363 -2 - 324 integration host factor - none -
fig|6666666.67496.peg.1837 CDS gi|512070728|gb|ATBY01000009.1| 208703 207951 -2 - 753 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67496.peg.1838 CDS gi|512070728|gb|ATBY01000009.1| 212984 209622 -2 - 3363 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.1839 CDS gi|512070728|gb|ATBY01000009.1| 214249 212987 -1 - 1263 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.1840 CDS gi|512070728|gb|ATBY01000009.1| 215575 214250 -1 - 1326 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67496.peg.1841 CDS gi|512070728|gb|ATBY01000009.1| 216251 215595 -2 - 657 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67496.peg.1842 CDS gi|512070728|gb|ATBY01000009.1| 216465 216905 3 + 441 FIG00544983: hypothetical protein - none -
fig|6666666.67496.peg.1843 CDS gi|512070728|gb|ATBY01000009.1| 216987 217463 3 + 477 FIG00546283: hypothetical protein - none -
fig|6666666.67496.peg.1844 CDS gi|512070728|gb|ATBY01000009.1| 218346 217495 -3 - 852 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.67496.peg.1845 CDS gi|512070728|gb|ATBY01000009.1| 219529 218528 -1 - 1002 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67496.peg.1846 CDS gi|512070728|gb|ATBY01000009.1| 220096 219533 -1 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67496.peg.1847 CDS gi|512070728|gb|ATBY01000009.1| 221324 220230 -2 - 1095 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67496.peg.1848 CDS gi|512070728|gb|ATBY01000009.1| 221895 221416 -3 - 480 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67496.peg.1849 CDS gi|512070728|gb|ATBY01000009.1| 223395 222310 -3 - 1086 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67496.peg.1850 CDS gi|512070728|gb|ATBY01000009.1| 224521 224012 -1 - 510 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67496.peg.1851 CDS gi|512070728|gb|ATBY01000009.1| 225653 224514 -2 - 1140 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67496.peg.1852 CDS gi|512070728|gb|ATBY01000009.1| 226309 225917 -1 - 393 hypothetical protein - none -
fig|6666666.67496.peg.1853 CDS gi|512070728|gb|ATBY01000009.1| 227340 226528 -3 - 813 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67496.peg.1854 CDS gi|512070728|gb|ATBY01000009.1| 228891 227767 -3 - 1125 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67496.peg.1855 CDS gi|512070728|gb|ATBY01000009.1| 229941 229219 -3 - 723 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.67496.peg.1856 CDS gi|512070728|gb|ATBY01000009.1| 232618 229949 -1 - 2670 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67496.peg.1857 CDS gi|512070728|gb|ATBY01000009.1| 234366 232873 -3 - 1494 ATPase, AAA family - none -
fig|6666666.67496.peg.1858 CDS gi|512070728|gb|ATBY01000009.1| 235588 234371 -1 - 1218 FIG00544116: hypothetical protein - none -
fig|6666666.67496.peg.1859 CDS gi|512070728|gb|ATBY01000009.1| 237599 235809 -2 - 1791 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67496.peg.1860 CDS gi|512070728|gb|ATBY01000009.1| 238187 239083 2 + 897 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67496.peg.1861 CDS gi|512070728|gb|ATBY01000009.1| 239339 240130 2 + 792 Putative CBS domain containing protein - none -
fig|6666666.67496.peg.1862 CDS gi|512070728|gb|ATBY01000009.1| 240518 241630 2 + 1113 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67496.peg.1863 CDS gi|512070728|gb|ATBY01000009.1| 241635 242285 3 + 651 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.67496.peg.1864 CDS gi|512070728|gb|ATBY01000009.1| 242512 243912 1 + 1401 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67496.peg.1865 CDS gi|512070728|gb|ATBY01000009.1| 245302 244019 -1 - 1284 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67496.peg.1866 CDS gi|512070728|gb|ATBY01000009.1| 246150 245512 -3 - 639 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.67496.peg.1867 CDS gi|512070728|gb|ATBY01000009.1| 246411 247307 3 + 897 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.67496.peg.1868 CDS gi|512070728|gb|ATBY01000009.1| 247677 248063 3 + 387 hypothetical protein - none -
fig|6666666.67496.peg.1869 CDS gi|512070728|gb|ATBY01000009.1| 248264 248674 2 + 411 hypothetical protein - none -
fig|6666666.67496.peg.1870 CDS gi|512070728|gb|ATBY01000009.1| 251143 248888 -1 - 2256 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67496.peg.1871 CDS gi|512070728|gb|ATBY01000009.1| 251735 251193 -2 - 543 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67496.peg.1872 CDS gi|512070728|gb|ATBY01000009.1| 253427 251739 -2 - 1689 dipeptide-binding protein DciAE - none -
fig|6666666.67496.peg.1873 CDS gi|512070728|gb|ATBY01000009.1| 255010 253769 -1 - 1242 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67496.peg.1874 CDS gi|512070728|gb|ATBY01000009.1| 257082 255013 -3 - 2070 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67496.peg.1875 CDS gi|512070728|gb|ATBY01000009.1| 257841 257458 -3 - 384 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.67496.peg.1876 CDS gi|512070728|gb|ATBY01000009.1| 259125 258028 -3 - 1098 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67496.peg.1877 CDS gi|512070728|gb|ATBY01000009.1| 259921 259322 -1 - 600 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67496.peg.1878 CDS gi|512070728|gb|ATBY01000009.1| 260739 260071 -3 - 669 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67496.peg.1879 CDS gi|512070728|gb|ATBY01000009.1| 261888 261130 -3 - 759 FIG000859: hypothetical protein - none -
fig|6666666.67496.peg.1880 CDS gi|512070728|gb|ATBY01000009.1| 262117 261989 -1 - 129 hypothetical protein - none -
fig|6666666.67496.peg.1881 CDS gi|512070728|gb|ATBY01000009.1| 262881 262258 -3 - 624 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67496.peg.1882 CDS gi|512070728|gb|ATBY01000009.1| 263750 262887 -2 - 864 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.67496.peg.1883 CDS gi|512070728|gb|ATBY01000009.1| 264207 263734 -3 - 474 hypothetical protein - none -
fig|6666666.67496.peg.1884 CDS gi|512070728|gb|ATBY01000009.1| 265583 264681 -2 - 903 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67496.peg.1885 CDS gi|512070728|gb|ATBY01000009.1| 266501 265968 -2 - 534 FIG053954: Probable conserved membrane protein - none -
fig|6666666.67496.peg.1886 CDS gi|512070728|gb|ATBY01000009.1| 267442 266498 -1 - 945 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.67496.peg.1887 CDS gi|512070728|gb|ATBY01000009.1| 268691 267834 -2 - 858 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.67496.peg.1888 CDS gi|512070728|gb|ATBY01000009.1| 269458 268856 -1 - 603 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) - none -
fig|6666666.67496.peg.1889 CDS gi|512070728|gb|ATBY01000009.1| 270058 269495 -1 - 564 FIG049476: HIT family protein - none -
fig|6666666.67496.peg.1890 CDS gi|512070728|gb|ATBY01000009.1| 272075 270045 -2 - 2031 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.67496.peg.1891 CDS gi|512070728|gb|ATBY01000009.1| 273884 272619 -2 - 1266 Dyp-type peroxidase family protein - none -
fig|6666666.67496.peg.1892 CDS gi|512070728|gb|ATBY01000009.1| 274581 273949 -3 - 633 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67496.peg.1893 CDS gi|512070728|gb|ATBY01000009.1| 275250 274702 -3 - 549 FIG00543909: hypothetical protein - none -
fig|6666666.67496.peg.1894 CDS gi|512070728|gb|ATBY01000009.1| 277011 278153 3 + 1143 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67496.peg.1895 CDS gi|512070728|gb|ATBY01000009.1| 278164 278577 1 + 414 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67496.peg.1896 CDS gi|512070728|gb|ATBY01000009.1| 279353 278646 -2 - 708 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67496.peg.1897 CDS gi|512070728|gb|ATBY01000009.1| 279467 280114 2 + 648 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67496.peg.1898 CDS gi|512070728|gb|ATBY01000009.1| 280215 281372 3 + 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.67496.peg.1899 CDS gi|512070728|gb|ATBY01000009.1| 283485 281515 -3 - 1971 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67496.peg.1900 CDS gi|512070728|gb|ATBY01000009.1| 285073 283766 -1 - 1308 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67496.peg.1901 CDS gi|512070728|gb|ATBY01000009.1| 285803 285066 -2 - 738 PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH PROTEIN - none -
fig|6666666.67496.peg.1902 CDS gi|512070728|gb|ATBY01000009.1| 287125 286157 -1 - 969 FIG00545882: hypothetical protein - none -
fig|6666666.67496.peg.1903 CDS gi|512070728|gb|ATBY01000009.1| 287739 287290 -3 - 450 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67496.peg.1904 CDS gi|512070728|gb|ATBY01000009.1| 288023 288559 2 + 537 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67496.peg.1905 CDS gi|512070728|gb|ATBY01000009.1| 289392 289099 -3 - 294 FIG00545109: hypothetical protein - none -
fig|6666666.67496.peg.1906 CDS gi|512070728|gb|ATBY01000009.1| 290627 289707 -2 - 921 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67496.peg.1907 CDS gi|512070728|gb|ATBY01000009.1| 291061 291813 1 + 753 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67496.peg.1908 CDS gi|512070728|gb|ATBY01000009.1| 292096 293859 1 + 1764 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.67496.peg.1909 CDS gi|512070728|gb|ATBY01000009.1| 294074 293907 -2 - 168 hypothetical protein - none -
fig|6666666.67496.peg.1910 CDS gi|512070728|gb|ATBY01000009.1| 294880 294083 -1 - 798 hypothetical protein - none -
fig|6666666.67496.peg.1911 CDS gi|512070728|gb|ATBY01000009.1| 296964 295249 -3 - 1716 DNA or RNA helicases of superfamily II - none -
fig|6666666.67496.peg.1912 CDS gi|512070728|gb|ATBY01000009.1| 297218 296967 -2 - 252 FIG00544358: hypothetical protein - none -
fig|6666666.67496.peg.1913 CDS gi|512070728|gb|ATBY01000009.1| 297265 298119 1 + 855 FIG00545207: hypothetical protein - none -
fig|6666666.67496.peg.1914 CDS gi|512070728|gb|ATBY01000009.1| 298728 300155 3 + 1428 Putative transferase - none -
fig|6666666.67496.peg.1915 CDS gi|512070728|gb|ATBY01000009.1| 300487 300921 1 + 435 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67496.peg.1916 CDS gi|512070728|gb|ATBY01000009.1| 301198 302181 1 + 984 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67496.peg.1917 CDS gi|512070728|gb|ATBY01000009.1| 302331 303710 3 + 1380 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67496.peg.1918 CDS gi|512070728|gb|ATBY01000009.1| 303956 304663 2 + 708 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67496.peg.1919 CDS gi|512070728|gb|ATBY01000009.1| 304892 305869 2 + 978 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.67496.peg.1920 CDS gi|512070728|gb|ATBY01000009.1| 307562 306432 -2 - 1131 hypothetical protein - none -
fig|6666666.67496.peg.1921 CDS gi|512070728|gb|ATBY01000009.1| 308212 309357 1 + 1146 FIG00544614: hypothetical protein - none -
fig|6666666.67496.peg.1922 CDS gi|512070728|gb|ATBY01000009.1| 309519 312041 3 + 2523 putative helicase - none -
fig|6666666.67496.peg.1923 CDS gi|512070728|gb|ATBY01000009.1| 312087 312515 3 + 429 putative ankyrin-like protein. - none -
fig|6666666.67496.peg.1924 CDS gi|512070728|gb|ATBY01000009.1| 312636 313298 3 + 663 hypothetical protein - none -
fig|6666666.67496.peg.1925 CDS gi|512070728|gb|ATBY01000009.1| 313929 314873 3 + 945 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67496.peg.1926 CDS gi|512070728|gb|ATBY01000009.1| 315061 319086 1 + 4026 ATP-dependent helicase HrpA - none -
fig|6666666.67496.peg.1927 CDS gi|512070728|gb|ATBY01000009.1| 319481 319149 -2 - 333 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67496.peg.1928 CDS gi|512070728|gb|ATBY01000009.1| 320448 321158 3 + 711 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67496.peg.1929 CDS gi|512070728|gb|ATBY01000009.1| 321638 322420 2 + 783 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.67496.peg.1930 CDS gi|512070728|gb|ATBY01000009.1| 322870 323643 1 + 774 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.67496.peg.1931 CDS gi|512070728|gb|ATBY01000009.1| 323640 324602 3 + 963 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67496.peg.1932 CDS gi|512070728|gb|ATBY01000009.1| 324656 326782 2 + 2127 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67496.peg.1933 CDS gi|512070728|gb|ATBY01000009.1| 327064 327333 1 + 270 Phosphocarrier protein of PTS system - none -
fig|6666666.67496.peg.1934 CDS gi|512070728|gb|ATBY01000009.1| 328694 327402 -2 - 1293 xanthine/uracil permeases - none -
fig|6666666.67496.peg.1935 CDS gi|512070728|gb|ATBY01000009.1| 330310 328769 -1 - 1542 GTP-binding protein HflX Hfl operon
fig|6666666.67496.peg.1936 CDS gi|512070728|gb|ATBY01000009.1| 330582 331319 3 + 738 FIG00546075: hypothetical protein - none -
fig|6666666.67496.peg.1937 CDS gi|512070728|gb|ATBY01000009.1| 331886 332566 2 + 681 FIG00543926: hypothetical protein - none -
fig|6666666.67496.peg.1938 CDS gi|512070728|gb|ATBY01000009.1| 333482 332655 -2 - 828 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.1939 CDS gi|512070728|gb|ATBY01000009.1| 334459 333506 -1 - 954 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.67496.peg.1940 CDS gi|512070728|gb|ATBY01000009.1| 335283 336440 3 + 1158 ATPase involved in DNA repair - none -
fig|6666666.67496.peg.1941 CDS gi|512070728|gb|ATBY01000009.1| 337319 336567 -2 - 753 FIG00544570: hypothetical protein - none -
fig|6666666.67496.peg.1942 CDS gi|512070728|gb|ATBY01000009.1| 338949 337432 -3 - 1518 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67496.peg.1943 CDS gi|512070728|gb|ATBY01000009.1| 339809 340207 2 + 399 Probable response regulator - none -
fig|6666666.67496.peg.1944 CDS gi|512070728|gb|ATBY01000009.1| 340226 340585 2 + 360 NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1945 CDS gi|512070728|gb|ATBY01000009.1| 340723 341292 1 + 570 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1946 CDS gi|512070728|gb|ATBY01000009.1| 341301 342011 3 + 711 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1947 CDS gi|512070728|gb|ATBY01000009.1| 342011 343375 2 + 1365 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1948 CDS gi|512070728|gb|ATBY01000009.1| 343372 344124 1 + 753 NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1949 CDS gi|512070728|gb|ATBY01000009.1| 344117 345460 2 + 1344 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1950 CDS gi|512070728|gb|ATBY01000009.1| 345457 347940 1 + 2484 NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1951 CDS gi|512070728|gb|ATBY01000009.1| 347946 349286 3 + 1341 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1952 CDS gi|512070728|gb|ATBY01000009.1| 349283 349900 2 + 618 NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1953 CDS gi|512070728|gb|ATBY01000009.1| 349897 350757 1 + 861 NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1954 CDS gi|512070728|gb|ATBY01000009.1| 350758 351057 1 + 300 NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1955 CDS gi|512070728|gb|ATBY01000009.1| 351063 352991 3 + 1929 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1956 CDS gi|512070728|gb|ATBY01000009.1| 353003 354577 2 + 1575 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1957 CDS gi|512070728|gb|ATBY01000009.1| 354574 356166 1 + 1593 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.67496.peg.1958 CDS gi|512070728|gb|ATBY01000009.1| 356839 356228 -1 - 612 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67496.peg.1959 CDS gi|512070728|gb|ATBY01000009.1| 358114 356954 -1 - 1161 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67496.peg.1960 CDS gi|512070728|gb|ATBY01000009.1| 358822 358610 -1 - 213 FIG00545605: hypothetical protein - none -
fig|6666666.67496.peg.1961 CDS gi|512070728|gb|ATBY01000009.1| 359035 359607 1 + 573 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67496.peg.1962 CDS gi|512070728|gb|ATBY01000009.1| 359878 360567 1 + 690 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67496.peg.1963 CDS gi|512070728|gb|ATBY01000009.1| 360560 361183 2 + 624 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67496.peg.1964 CDS gi|512070728|gb|ATBY01000009.1| 361402 361752 1 + 351 hypothetical protein - none -
fig|6666666.67496.peg.1965 CDS gi|512071105|gb|ATBY01000008.1| 1116 193 -3 - 924 FIG00995839: hypothetical protein - none -
fig|6666666.67496.peg.1966 CDS gi|512071105|gb|ATBY01000008.1| 1766 1182 -2 - 585 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67496.peg.1967 CDS gi|512071105|gb|ATBY01000008.1| 1911 4769 3 + 2859 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67496.peg.1968 CDS gi|512071105|gb|ATBY01000008.1| 6400 4790 -1 - 1611 hypothetical protein - none -
fig|6666666.67496.peg.1969 CDS gi|512071105|gb|ATBY01000008.1| 7008 7364 3 + 357 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67496.peg.1970 CDS gi|512071105|gb|ATBY01000008.1| 7407 7601 3 + 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67496.peg.1971 CDS gi|512071105|gb|ATBY01000008.1| 7657 8043 1 + 387 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67496.peg.1972 CDS gi|512071105|gb|ATBY01000008.1| 9438 8506 -3 - 933 Diacylglycerol kinase-related protein - none -
fig|6666666.67496.peg.1973 CDS gi|512071105|gb|ATBY01000008.1| 9756 9643 -3 - 114 hypothetical protein - none -
fig|6666666.67496.peg.1974 CDS gi|512071105|gb|ATBY01000008.1| 10345 10578 1 + 234 hypothetical protein - none -
fig|6666666.67496.peg.1975 CDS gi|512071105|gb|ATBY01000008.1| 10900 10679 -1 - 222 hypothetical protein - none -
fig|6666666.67496.peg.1976 CDS gi|512071105|gb|ATBY01000008.1| 10878 11816 3 + 939 FIG011178: rRNA methylase RNA methylation
fig|6666666.67496.peg.1977 CDS gi|512071105|gb|ATBY01000008.1| 12504 13541 3 + 1038 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67496.peg.1978 CDS gi|512071105|gb|ATBY01000008.1| 13641 16169 3 + 2529 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67496.peg.1979 CDS gi|512071105|gb|ATBY01000008.1| 16560 16444 -3 - 117 hypothetical protein - none -
fig|6666666.67496.peg.1980 CDS gi|512071105|gb|ATBY01000008.1| 16559 17299 2 + 741 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.67496.peg.1981 CDS gi|512071105|gb|ATBY01000008.1| 17846 18244 2 + 399 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway
fig|6666666.67496.peg.1982 CDS gi|512071105|gb|ATBY01000008.1| 18516 18379 -3 - 138 hypothetical protein - none -
fig|6666666.67496.peg.1983 CDS gi|512071105|gb|ATBY01000008.1| 18592 19797 1 + 1206 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.67496.peg.1984 CDS gi|512071105|gb|ATBY01000008.1| 20086 21213 1 + 1128 FIG00547275: hypothetical protein - none -
fig|6666666.67496.peg.1985 CDS gi|512071105|gb|ATBY01000008.1| 21206 22810 2 + 1605 FIG00543839: hypothetical protein - none -
fig|6666666.67496.peg.1986 CDS gi|512071105|gb|ATBY01000008.1| 22797 23471 3 + 675 hypothetical protein - none -
fig|6666666.67496.peg.1987 CDS gi|512071105|gb|ATBY01000008.1| 23688 24260 3 + 573 hypothetical protein - none -
fig|6666666.67496.peg.1988 CDS gi|512071105|gb|ATBY01000008.1| 24235 26040 1 + 1806 hypothetical protein - none -
fig|6666666.67496.peg.1989 CDS gi|512071105|gb|ATBY01000008.1| 26197 27561 1 + 1365 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.67496.peg.1990 CDS gi|512071105|gb|ATBY01000008.1| 27697 27888 1 + 192 UPF0434 protein YcaR - none -
fig|6666666.67496.peg.1991 CDS gi|512071105|gb|ATBY01000008.1| 27925 29184 1 + 1260 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67496.peg.1992 CDS gi|512071105|gb|ATBY01000008.1| 30012 31034 3 + 1023 putative aldose-1-epimerase( EC:5.1.3.3 ) - none -
fig|6666666.67496.peg.1993 CDS gi|512071105|gb|ATBY01000008.1| 31248 32909 3 + 1662 Predicted sodium-dependent galactose transporter - none -
fig|6666666.67496.peg.1994 CDS gi|512071105|gb|ATBY01000008.1| 32926 33372 1 + 447 putative membrane protein - none -
fig|6666666.67496.peg.1995 CDS gi|512071105|gb|ATBY01000008.1| 33438 34556 3 + 1119 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.67496.peg.1996 CDS gi|512071105|gb|ATBY01000008.1| 34556 35791 2 + 1236 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67496.peg.1997 CDS gi|512071173|gb|ATBY01000007.1| 1148 495 -2 - 654 Transcriptional regulator, IclR family - none -
fig|6666666.67496.peg.1998 CDS gi|512071173|gb|ATBY01000007.1| 1253 2626 2 + 1374 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67496.peg.1999 CDS gi|512071173|gb|ATBY01000007.1| 2722 3309 1 + 588 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67496.peg.2000 CDS gi|512071173|gb|ATBY01000007.1| 4113 4706 3 + 594 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67496.peg.2001 CDS gi|512071173|gb|ATBY01000007.1| 5870 4884 -2 - 987 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67496.peg.2002 CDS gi|512071173|gb|ATBY01000007.1| 6026 7021 2 + 996 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.2003 CDS gi|512071173|gb|ATBY01000007.1| 7028 8047 2 + 1020 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67496.peg.2004 CDS gi|512071173|gb|ATBY01000007.1| 9160 8306 -1 - 855 Putative exported protein - none -
fig|6666666.67496.peg.2005 CDS gi|512071173|gb|ATBY01000007.1| 9213 10181 3 + 969 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67496.peg.2006 CDS gi|512071173|gb|ATBY01000007.1| 10181 10849 2 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67496.peg.2007 CDS gi|512071173|gb|ATBY01000007.1| 10860 12305 3 + 1446 Dihydroxyacetone kinase family protein - none -
fig|6666666.67496.peg.2008 CDS gi|512071173|gb|ATBY01000007.1| 12309 14417 3 + 2109 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67496.peg.2009 CDS gi|512071173|gb|ATBY01000007.1| 14912 15043 2 + 132 hypothetical protein - none -
fig|6666666.67496.peg.2010 CDS gi|512071173|gb|ATBY01000007.1| 15044 15616 2 + 573 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.67496.peg.2011 CDS gi|512071173|gb|ATBY01000007.1| 15621 16103 3 + 483 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.67496.peg.2012 CDS gi|512071173|gb|ATBY01000007.1| 17140 16376 -1 - 765 ATP-binding protein - none -
fig|6666666.67496.peg.2013 CDS gi|512071173|gb|ATBY01000007.1| 18055 17156 -1 - 900 putative amino acid ABC transporter permease protein - none -
fig|6666666.67496.peg.2014 CDS gi|512071173|gb|ATBY01000007.1| 18983 18075 -2 - 909 putative secreted protein - none -
fig|6666666.67496.peg.2015 CDS gi|512071173|gb|ATBY01000007.1| 19312 20274 1 + 963 ABC-type transporter, periplasmic component - none -
fig|6666666.67496.peg.2016 CDS gi|512071173|gb|ATBY01000007.1| 20424 21419 3 + 996 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.67496.peg.2017 CDS gi|512071173|gb|ATBY01000007.1| 21773 22216 2 + 444 putative iron ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.2018 CDS gi|512071173|gb|ATBY01000007.1| 22307 23671 2 + 1365 Sialic acid transporter (permease) NanT Sialic Acid Metabolism
fig|6666666.67496.peg.2019 CDS gi|512071173|gb|ATBY01000007.1| 24525 24812 3 + 288 hypothetical protein - none -
fig|6666666.67496.peg.2020 CDS gi|512071173|gb|ATBY01000007.1| 24837 27491 3 + 2655 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67496.peg.2021 CDS gi|512071173|gb|ATBY01000007.1| 27494 27826 2 + 333 hypothetical protein - none -
fig|6666666.67496.peg.2022 CDS gi|512071173|gb|ATBY01000007.1| 28810 28031 -1 - 780 SAM-dependent methyltransferases - none -
fig|6666666.67496.peg.2023 CDS gi|512071173|gb|ATBY01000007.1| 29017 30462 1 + 1446 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.67496.peg.2024 CDS gi|512071173|gb|ATBY01000007.1| 30664 30879 1 + 216 hypothetical protein - none -
fig|6666666.67496.peg.2025 CDS gi|512071173|gb|ATBY01000007.1| 31150 31749 1 + 600 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67496.peg.2026 CDS gi|512071173|gb|ATBY01000007.1| 33095 31740 -2 - 1356 FIG00546368: hypothetical protein - none -
fig|6666666.67496.peg.2027 CDS gi|512071173|gb|ATBY01000007.1| 35041 33446 -1 - 1596 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67496.peg.2028 CDS gi|512071173|gb|ATBY01000007.1| 35737 37818 1 + 2082 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67496.peg.2029 CDS gi|512071173|gb|ATBY01000007.1| 37874 38314 2 + 441 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67496.peg.2030 CDS gi|512071173|gb|ATBY01000007.1| 40718 38499 -2 - 2220 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67496.peg.2031 CDS gi|512071233|gb|ATBY01000006.1| 172 2286 1 + 2115 Calcium-binding acidic-repeat protein precursor - none -
fig|6666666.67496.peg.2032 CDS gi|512071233|gb|ATBY01000006.1| 3181 2510 -1 - 672 FIG00544413: hypothetical protein - none -
fig|6666666.67496.peg.2033 CDS gi|512071233|gb|ATBY01000006.1| 3342 3229 -3 - 114 hypothetical protein - none -
fig|6666666.67496.peg.2034 CDS gi|512071233|gb|ATBY01000006.1| 3403 5481 1 + 2079 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67496.peg.2035 CDS gi|512071233|gb|ATBY01000006.1| 6314 5634 -2 - 681 FIG00544014: hypothetical protein - none -
fig|6666666.67496.peg.2036 CDS gi|512071233|gb|ATBY01000006.1| 6648 6385 -3 - 264 hypothetical protein - none -
fig|6666666.67496.peg.2037 CDS gi|512071233|gb|ATBY01000006.1| 6616 6909 1 + 294 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67496.peg.2038 CDS gi|512071233|gb|ATBY01000006.1| 6913 8409 1 + 1497 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67496.peg.2039 CDS gi|512071233|gb|ATBY01000006.1| 8622 8837 3 + 216 hypothetical protein - none -
fig|6666666.67496.peg.2040 CDS gi|512071233|gb|ATBY01000006.1| 8841 9506 3 + 666 hypothetical protein - none -
fig|6666666.67496.peg.2041 CDS gi|512071233|gb|ATBY01000006.1| 9517 10548 1 + 1032 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67496.peg.2042 CDS gi|512071233|gb|ATBY01000006.1| 11355 10675 -3 - 681 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis
fig|6666666.67496.peg.2043 CDS gi|512071233|gb|ATBY01000006.1| 13129 11426 -1 - 1704 Uncharacterized transporter PPA2034 - none -
fig|6666666.67496.peg.2044 CDS gi|512071233|gb|ATBY01000006.1| 13241 14569 2 + 1329 hypothetical protein - none -
fig|6666666.67496.peg.2045 CDS gi|512071233|gb|ATBY01000006.1| 14779 14648 -1 - 132 hypothetical protein - none -
fig|6666666.67496.peg.2046 CDS gi|512071233|gb|ATBY01000006.1| 14802 15767 3 + 966 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.67496.peg.2047 CDS gi|512071233|gb|ATBY01000006.1| 16263 15748 -3 - 516 acetyltransferase, GNAT family - none -
fig|6666666.67496.peg.2048 CDS gi|512071233|gb|ATBY01000006.1| 16500 16387 -3 - 114 hypothetical protein - none -
fig|6666666.67496.peg.2049 CDS gi|512071233|gb|ATBY01000006.1| 16655 17410 2 + 756 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.2050 CDS gi|512071233|gb|ATBY01000006.1| 17423 18781 2 + 1359 FIG00945426: hypothetical protein - none -
fig|6666666.67496.peg.2051 CDS gi|512071233|gb|ATBY01000006.1| 19023 20528 3 + 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67496.peg.2052 CDS gi|512071233|gb|ATBY01000006.1| 20927 22246 2 + 1320 hypothetical protein, truncated - none -
fig|6666666.67496.peg.2053 CDS gi|512071233|gb|ATBY01000006.1| 22354 23394 1 + 1041 Putative aldo/keto-reductase family protein - none -
fig|6666666.67496.peg.2054 CDS gi|512071233|gb|ATBY01000006.1| 24350 23610 -2 - 741 lysine exporter protein - none -
fig|6666666.67496.peg.2055 CDS gi|512071233|gb|ATBY01000006.1| 24435 25349 3 + 915 lysine export regulator protein - none -
fig|6666666.67496.peg.2056 CDS gi|512071233|gb|ATBY01000006.1| 26800 25643 -1 - 1158 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67496.peg.2057 CDS gi|512071233|gb|ATBY01000006.1| 26930 27955 2 + 1026 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67496.peg.2058 CDS gi|512071233|gb|ATBY01000006.1| 29512 28100 -1 - 1413 FIG00546232: hypothetical protein - none -
fig|6666666.67496.peg.2059 CDS gi|512071233|gb|ATBY01000006.1| 31493 29658 -2 - 1836 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67496.peg.2060 CDS gi|512071233|gb|ATBY01000006.1| 32577 32026 -3 - 552 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67496.peg.2061 CDS gi|512071233|gb|ATBY01000006.1| 33072 35036 3 + 1965 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67496.peg.2062 CDS gi|512071233|gb|ATBY01000006.1| 35029 35556 1 + 528 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67496.peg.2063 CDS gi|512071233|gb|ATBY01000006.1| 35625 36641 3 + 1017 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67496.peg.2064 CDS gi|512071233|gb|ATBY01000006.1| 37167 37367 3 + 201 hypothetical protein - none -
fig|6666666.67496.peg.2065 CDS gi|512071233|gb|ATBY01000006.1| 37662 37823 3 + 162 hypothetical protein - none -
fig|6666666.67496.peg.2066 CDS gi|512071233|gb|ATBY01000006.1| 37829 38680 2 + 852 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67496.peg.2067 CDS gi|512071233|gb|ATBY01000006.1| 38705 40510 2 + 1806 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.67496.peg.2068 CDS gi|512071233|gb|ATBY01000006.1| 40830 42551 3 + 1722 FIG00545237: hypothetical protein - none -
fig|6666666.67496.peg.2069 CDS gi|512071233|gb|ATBY01000006.1| 42674 44269 2 + 1596 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67496.peg.2070 CDS gi|512071233|gb|ATBY01000006.1| 44555 45580 2 + 1026 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67496.peg.2071 CDS gi|512071233|gb|ATBY01000006.1| 45789 46586 3 + 798 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67496.peg.2072 CDS gi|512071233|gb|ATBY01000006.1| 47575 46601 -1 - 975 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67496.peg.2073 CDS gi|512071233|gb|ATBY01000006.1| 47792 49216 2 + 1425 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67496.peg.2074 CDS gi|512071233|gb|ATBY01000006.1| 50192 49992 -2 - 201 hypothetical protein - none -
fig|6666666.67496.peg.2075 CDS gi|512071233|gb|ATBY01000006.1| 50614 51561 1 + 948 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.2076 CDS gi|512071233|gb|ATBY01000006.1| 51562 52593 1 + 1032 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.2077 CDS gi|512071233|gb|ATBY01000006.1| 52652 53968 2 + 1317 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.2078 CDS gi|512071233|gb|ATBY01000006.1| 54002 55162 2 + 1161 SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3) - none -
fig|6666666.67496.peg.2079 CDS gi|512071233|gb|ATBY01000006.1| 55407 58130 3 + 2724 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.67496.peg.2080 CDS gi|512071233|gb|ATBY01000006.1| 58176 58580 3 + 405 hypothetical protein - none -
fig|6666666.67496.peg.2081 CDS gi|512071233|gb|ATBY01000006.1| 58571 59470 2 + 900 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.67496.peg.2082 CDS gi|512071233|gb|ATBY01000006.1| 61006 59588 -1 - 1419 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67496.peg.2083 CDS gi|512071233|gb|ATBY01000006.1| 60929 61048 2 + 120 hypothetical protein - none -
fig|6666666.67496.peg.2084 CDS gi|512071233|gb|ATBY01000006.1| 61475 61609 2 + 135 hypothetical protein - none -
fig|6666666.67496.peg.2085 CDS gi|512071233|gb|ATBY01000006.1| 61761 62681 3 + 921 hypothetical protein - none -
fig|6666666.67496.peg.2086 CDS gi|512071233|gb|ATBY01000006.1| 63675 64682 3 + 1008 hypothetical protein - none -
fig|6666666.67496.peg.2087 CDS gi|512071233|gb|ATBY01000006.1| 65077 65730 1 + 654 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67496.peg.2088 CDS gi|512071233|gb|ATBY01000006.1| 65783 67162 2 + 1380 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67496.peg.2089 CDS gi|512071233|gb|ATBY01000006.1| 67159 67962 1 + 804 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67496.peg.2090 CDS gi|512071233|gb|ATBY01000006.1| 68809 69318 1 + 510 DNA topology modulation protein - none -
fig|6666666.67496.peg.2091 CDS gi|512071233|gb|ATBY01000006.1| 71062 69689 -1 - 1374 hypothetical protein - none -
fig|6666666.67496.peg.2092 CDS gi|512071353|gb|ATBY01000003.1| 4369 2186 -1 - 2184 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67496.peg.2093 CDS gi|512071353|gb|ATBY01000003.1| 6328 4391 -1 - 1938 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.67496.peg.2094 CDS gi|512071353|gb|ATBY01000003.1| 6621 7463 3 + 843 ABC transporter, ATP-binding protein - none -
fig|6666666.67496.peg.2095 CDS gi|512071353|gb|ATBY01000003.1| 7479 8729 3 + 1251 SAM-dependent methyltransferase - none -
fig|6666666.67496.peg.2096 CDS gi|512071353|gb|ATBY01000003.1| 9437 10222 2 + 786 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.67496.peg.2097 CDS gi|512071353|gb|ATBY01000003.1| 10242 11186 3 + 945 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.67496.peg.2098 CDS gi|512071353|gb|ATBY01000003.1| 11563 12147 1 + 585 putative transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.2099 CDS gi|512071353|gb|ATBY01000003.1| 12832 13101 1 + 270 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.67496.peg.2100 CDS gi|512071353|gb|ATBY01000003.1| 13949 17767 2 + 3819 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67496.peg.2101 CDS gi|512071353|gb|ATBY01000003.1| 17954 19102 2 + 1149 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67496.peg.2102 CDS gi|512071353|gb|ATBY01000003.1| 19256 20332 2 + 1077 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67496.peg.2103 CDS gi|512071353|gb|ATBY01000003.1| 20332 21234 1 + 903 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67496.peg.2104 CDS gi|512071492|gb|ATBY01000002.1| 714 133 -3 - 582 hypothetical protein - none -
fig|6666666.67496.peg.2105 CDS gi|512071492|gb|ATBY01000002.1| 1054 941 -1 - 114 hypothetical protein - none -
fig|6666666.67496.peg.2106 CDS gi|512071492|gb|ATBY01000002.1| 1774 1929 1 + 156 hypothetical protein - none -
fig|6666666.67496.peg.2107 CDS gi|512071492|gb|ATBY01000002.1| 2838 2191 -3 - 648 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67496.peg.2108 CDS gi|512071492|gb|ATBY01000002.1| 4659 3010 -3 - 1650 Beta-carotene ketolase (EC 1.14.-.-) - none -
fig|6666666.67496.peg.2109 CDS gi|512071492|gb|ATBY01000002.1| 4830 5948 3 + 1119 No significant database matches - none -
fig|6666666.67496.peg.2110 CDS gi|512071492|gb|ATBY01000002.1| 6976 6035 -1 - 942 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67496.peg.2111 CDS gi|512071492|gb|ATBY01000002.1| 8455 7043 -1 - 1413 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67496.peg.2112 CDS gi|512071492|gb|ATBY01000002.1| 8634 10199 3 + 1566 Multicopper oxidase Copper homeostasis
fig|6666666.67496.peg.2113 CDS gi|512071492|gb|ATBY01000002.1| 10444 11109 1 + 666 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.2114 CDS gi|512071492|gb|ATBY01000002.1| 11148 14804 3 + 3657 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67496.peg.2115 CDS gi|512071492|gb|ATBY01000002.1| 14825 15568 2 + 744 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67496.peg.2116 CDS gi|512071492|gb|ATBY01000002.1| 16228 15842 -1 - 387 FIG00546185: hypothetical protein - none -
fig|6666666.67496.peg.2117 CDS gi|512071492|gb|ATBY01000002.1| 16387 17202 1 + 816 FIG00545464: hypothetical protein - none -
fig|6666666.67496.peg.2118 CDS gi|512071492|gb|ATBY01000002.1| 17552 18826 2 + 1275 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.67496.peg.2119 CDS gi|512071492|gb|ATBY01000002.1| 19261 19617 1 + 357 Putative membrane protein - none -
fig|6666666.67496.peg.2120 CDS gi|512071492|gb|ATBY01000002.1| 19620 20201 3 + 582 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67496.peg.2121 CDS gi|512071492|gb|ATBY01000002.1| 20208 21164 3 + 957 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67496.peg.2122 CDS gi|512071492|gb|ATBY01000002.1| 22434 21334 -3 - 1101 Integrase - none -
fig|6666666.67496.peg.2123 CDS gi|512071492|gb|ATBY01000002.1| 22922 22530 -2 - 393 hypothetical protein - none -
fig|6666666.67496.peg.2124 CDS gi|512071492|gb|ATBY01000002.1| 23289 22912 -3 - 378 No significant database matches - none -
fig|6666666.67496.peg.2125 CDS gi|512071492|gb|ATBY01000002.1| 23755 23282 -1 - 474 hypothetical protein - none -
fig|6666666.67496.peg.2126 CDS gi|512071492|gb|ATBY01000002.1| 23916 24149 3 + 234 hypothetical protein - none -
fig|6666666.67496.peg.2127 CDS gi|512071492|gb|ATBY01000002.1| 24330 25049 3 + 720 Phage antirepressor protein - none -
fig|6666666.67496.peg.2128 CDS gi|512071492|gb|ATBY01000002.1| 25064 25243 2 + 180 hypothetical protein - none -
fig|6666666.67496.peg.2129 CDS gi|512071492|gb|ATBY01000002.1| 25328 25522 2 + 195 hypothetical protein - none -
fig|6666666.67496.peg.2130 CDS gi|512071492|gb|ATBY01000002.1| 25564 25755 1 + 192 hypothetical protein - none -
fig|6666666.67496.peg.2131 CDS gi|512071492|gb|ATBY01000002.1| 25752 26213 3 + 462 putative helicase - none -
fig|6666666.67496.peg.2132 CDS gi|512071492|gb|ATBY01000002.1| 26210 26392 2 + 183 hypothetical protein - none -
fig|6666666.67496.peg.2133 CDS gi|512071492|gb|ATBY01000002.1| 26389 26529 1 + 141 hypothetical protein - none -
fig|6666666.67496.peg.2134 CDS gi|512071492|gb|ATBY01000002.1| 26526 26915 3 + 390 hypothetical protein - none -
fig|6666666.67496.peg.2135 CDS gi|512071492|gb|ATBY01000002.1| 26912 27070 2 + 159 hypothetical protein - none -
fig|6666666.67496.peg.2136 CDS gi|512071492|gb|ATBY01000002.1| 27067 27324 1 + 258 hypothetical protein - none -
fig|6666666.67496.peg.2137 CDS gi|512071492|gb|ATBY01000002.1| 27335 27721 2 + 387 hypothetical protein - none -
fig|6666666.67496.peg.2138 CDS gi|512071492|gb|ATBY01000002.1| 27911 27699 -2 - 213 hypothetical protein - none -
fig|6666666.67496.peg.2139 CDS gi|512071492|gb|ATBY01000002.1| 28124 28438 2 + 315 hypothetical protein - none -
fig|6666666.67496.peg.2140 CDS gi|512071492|gb|ATBY01000002.1| 28548 29537 3 + 990 Phage-related protein - none -
fig|6666666.67496.peg.2141 CDS gi|512071492|gb|ATBY01000002.1| 29548 29895 1 + 348 hypothetical protein - none -
fig|6666666.67496.peg.2142 CDS gi|512071492|gb|ATBY01000002.1| 29892 30071 3 + 180 hypothetical protein - none -
fig|6666666.67496.peg.2143 CDS gi|512071492|gb|ATBY01000002.1| 30149 30472 2 + 324 hypothetical protein - none -
fig|6666666.67496.peg.2144 CDS gi|512071492|gb|ATBY01000002.1| 30472 31323 1 + 852 Phage virulence-associated protein - none -
fig|6666666.67496.peg.2145 CDS gi|512071492|gb|ATBY01000002.1| 31324 31512 1 + 189 hypothetical protein - none -
fig|6666666.67496.peg.2146 CDS gi|512071492|gb|ATBY01000002.1| 31513 31920 1 + 408 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67496.peg.2147 CDS gi|512071492|gb|ATBY01000002.1| 32629 32826 1 + 198 hypothetical protein - none -
fig|6666666.67496.peg.2148 CDS gi|512071492|gb|ATBY01000002.1| 32823 33137 3 + 315 hypothetical protein - none -
fig|6666666.67496.peg.2149 CDS gi|512071492|gb|ATBY01000002.1| 33395 33520 2 + 126 hypothetical protein - none -
fig|6666666.67496.peg.2150 CDS gi|512071492|gb|ATBY01000002.1| 33797 33937 2 + 141 hypothetical protein - none -
fig|6666666.67496.peg.2151 CDS gi|512071492|gb|ATBY01000002.1| 33988 34329 1 + 342 hypothetical protein - none -
fig|6666666.67496.peg.2152 CDS gi|512071492|gb|ATBY01000002.1| 34368 34490 3 + 123 hypothetical protein - none -
fig|6666666.67496.peg.2153 CDS gi|512071492|gb|ATBY01000002.1| 34742 35125 2 + 384 hypothetical protein - none -
fig|6666666.67496.peg.2154 CDS gi|512071492|gb|ATBY01000002.1| 35891 36679 2 + 789 hypothetical protein - none -
fig|6666666.67496.peg.2155 CDS gi|512071492|gb|ATBY01000002.1| 36688 37017 1 + 330 hypothetical protein - none -
fig|6666666.67496.peg.2156 CDS gi|512071492|gb|ATBY01000002.1| 37035 38630 3 + 1596 Phage terminase - none -
fig|6666666.67496.peg.2157 CDS gi|512071492|gb|ATBY01000002.1| 38647 40059 1 + 1413 Phage protein - none -
fig|6666666.67496.peg.2158 CDS gi|512071492|gb|ATBY01000002.1| 40071 41456 3 + 1386 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.67496.peg.2159 CDS gi|512071492|gb|ATBY01000002.1| 41472 41852 3 + 381 hypothetical protein - none -
fig|6666666.67496.peg.2160 CDS gi|512071492|gb|ATBY01000002.1| 41875 42801 1 + 927 Phage protein - none -
fig|6666666.67496.peg.2161 CDS gi|512071492|gb|ATBY01000002.1| 42801 43124 3 + 324 hypothetical protein - none -
fig|6666666.67496.peg.2162 CDS gi|512071492|gb|ATBY01000002.1| 43137 43568 3 + 432 hypothetical protein - none -
fig|6666666.67496.peg.2163 CDS gi|512071492|gb|ATBY01000002.1| 43583 43900 2 + 318 hypothetical protein - none -
fig|6666666.67496.peg.2164 CDS gi|512071492|gb|ATBY01000002.1| 43901 44200 2 + 300 hypothetical protein - none -
fig|6666666.67496.peg.2165 CDS gi|512071492|gb|ATBY01000002.1| 44428 44607 1 + 180 hypothetical protein - none -
fig|6666666.67496.peg.2166 CDS gi|512071492|gb|ATBY01000002.1| 44623 45360 1 + 738 hypothetical protein - none -
fig|6666666.67496.peg.2167 CDS gi|512071492|gb|ATBY01000002.1| 45470 45357 -2 - 114 hypothetical protein - none -
fig|6666666.67496.peg.2168 CDS gi|512071492|gb|ATBY01000002.1| 45513 45803 3 + 291 hypothetical protein - none -
fig|6666666.67496.peg.2169 CDS gi|512071492|gb|ATBY01000002.1| 45821 46174 2 + 354 hypothetical protein - none -
fig|6666666.67496.peg.2170 CDS gi|512071492|gb|ATBY01000002.1| 46192 52617 1 + 6426 hypothetical protein - none -
fig|6666666.67496.peg.2171 CDS gi|512071492|gb|ATBY01000002.1| 52618 53400 1 + 783 hypothetical protein - none -
fig|6666666.67496.peg.2172 CDS gi|512071492|gb|ATBY01000002.1| 53499 54287 3 + 789 immunity-specific protein Beta286 - none -
fig|6666666.67496.peg.2173 CDS gi|512071492|gb|ATBY01000002.1| 54368 56851 2 + 2484 hypothetical protein - none -
fig|6666666.67496.peg.2174 CDS gi|512071492|gb|ATBY01000002.1| 57284 57619 2 + 336 hypothetical protein - none -
fig|6666666.67496.peg.2175 CDS gi|512071492|gb|ATBY01000002.1| 57651 57971 3 + 321 hypothetical protein - none -
fig|6666666.67496.peg.2176 CDS gi|512071492|gb|ATBY01000002.1| 58130 58531 2 + 402 hypothetical protein - none -
fig|6666666.67496.peg.2177 CDS gi|512071492|gb|ATBY01000002.1| 59013 59963 3 + 951 hypothetical protein - none -
fig|6666666.67496.peg.2178 CDS gi|512071492|gb|ATBY01000002.1| 60010 60351 1 + 342 hypothetical protein - none -
fig|6666666.67496.peg.2179 CDS gi|512071492|gb|ATBY01000002.1| 60368 60775 2 + 408 hypothetical protein - none -
fig|6666666.67496.peg.2180 CDS gi|512071492|gb|ATBY01000002.1| 60759 61115 3 + 357 hypothetical protein - none -
fig|6666666.67496.peg.2181 CDS gi|512071492|gb|ATBY01000002.1| 62055 61189 -3 - 867 Site-specific recombinase XerD - none -
fig|6666666.67496.peg.2182 CDS gi|512071492|gb|ATBY01000002.1| 63625 62990 -1 - 636 hypothetical protein - none -
fig|6666666.67496.peg.2183 CDS gi|512071492|gb|ATBY01000002.1| 64137 63730 -3 - 408 hypothetical protein - none -
fig|6666666.67496.peg.2184 CDS gi|512071492|gb|ATBY01000002.1| 64419 64138 -3 - 282 hypothetical protein - none -
fig|6666666.67496.peg.2185 CDS gi|512071492|gb|ATBY01000002.1| 64723 64505 -1 - 219 hypothetical protein - none -
fig|6666666.67496.peg.2186 CDS gi|512071492|gb|ATBY01000002.1| 65180 64836 -2 - 345 hypothetical protein - none -
fig|6666666.67496.peg.2187 CDS gi|512071492|gb|ATBY01000002.1| 65484 65293 -3 - 192 hypothetical protein - none -
fig|6666666.67496.peg.2188 CDS gi|512071492|gb|ATBY01000002.1| 66316 67038 1 + 723 FIG00543890: hypothetical protein - none -
fig|6666666.67496.peg.2189 CDS gi|512071492|gb|ATBY01000002.1| 67782 67243 -3 - 540 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67496.peg.2190 CDS gi|512071492|gb|ATBY01000002.1| 68328 67930 -3 - 399 FIG00544319: hypothetical protein - none -
fig|6666666.67496.peg.2191 CDS gi|512071492|gb|ATBY01000002.1| 68512 68631 1 + 120 hypothetical protein - none -
fig|6666666.67496.peg.2192 CDS gi|512071492|gb|ATBY01000002.1| 68852 69715 2 + 864 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67496.peg.2193 CDS gi|512071492|gb|ATBY01000002.1| 69976 70302 1 + 327 FIG00543949: hypothetical protein - none -
fig|6666666.67496.peg.2194 CDS gi|512071492|gb|ATBY01000002.1| 70469 71239 2 + 771 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67496.peg.2195 CDS gi|512071492|gb|ATBY01000002.1| 71417 71974 2 + 558 FIG00544436: hypothetical protein - none -
fig|6666666.67496.peg.2196 CDS gi|512071492|gb|ATBY01000002.1| 72917 71988 -2 - 930 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67496.peg.2197 CDS gi|512071492|gb|ATBY01000002.1| 73284 74585 3 + 1302 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.67496.peg.2198 CDS gi|512071492|gb|ATBY01000002.1| 75013 74744 -1 - 270 hypothetical protein - none -
fig|6666666.67496.peg.2199 CDS gi|512071492|gb|ATBY01000002.1| 75408 75010 -3 - 399 FIG00546727: hypothetical protein - none -
fig|6666666.67496.peg.2200 CDS gi|512071492|gb|ATBY01000002.1| 75427 76200 1 + 774 putative LysR-family transcriptional regulator - none -
fig|6666666.67496.peg.2201 CDS gi|512071492|gb|ATBY01000002.1| 76353 76997 3 + 645 FIG00544545: hypothetical protein - none -
fig|6666666.67496.peg.2202 CDS gi|512071492|gb|ATBY01000002.1| 77331 78719 3 + 1389 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.67496.peg.2203 CDS gi|512071492|gb|ATBY01000002.1| 80241 78733 -3 - 1509 permease of the major facilitator superfamily - none -
fig|6666666.67496.peg.2204 CDS gi|512071492|gb|ATBY01000002.1| 81452 80544 -2 - 909 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) EC699-706
fig|6666666.67496.peg.2205 CDS gi|512071492|gb|ATBY01000002.1| 82167 81502 -3 - 666 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) EC699-706;
EC699-706
fig|6666666.67496.peg.2206 CDS gi|512071492|gb|ATBY01000002.1| 82921 82169 -1 - 753 Lactam utilization protein LamB EC699-706
fig|6666666.67496.peg.2207 CDS gi|512071492|gb|ATBY01000002.1| 84370 83072 -1 - 1299 FIG00545033: hypothetical protein - none -
fig|6666666.67496.peg.2208 CDS gi|512071492|gb|ATBY01000002.1| 84796 85491 1 + 696 Transcriptional regulator, GntR family - none -
fig|6666666.67496.peg.2209 CDS gi|512071492|gb|ATBY01000002.1| 87031 85625 -1 - 1407 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67496.peg.2210 CDS gi|512071492|gb|ATBY01000002.1| 88181 87165 -2 - 1017 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67496.peg.2211 CDS gi|512071492|gb|ATBY01000002.1| 88627 89136 1 + 510 FIG00545451: hypothetical protein - none -
fig|6666666.67496.peg.2212 CDS gi|512071492|gb|ATBY01000002.1| 89444 89145 -2 - 300 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67496.peg.2213 CDS gi|512071492|gb|ATBY01000002.1| 90802 89567 -1 - 1236 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67496.peg.2214 CDS gi|512071492|gb|ATBY01000002.1| 90936 91913 3 + 978 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67496.peg.2215 CDS gi|512071492|gb|ATBY01000002.1| 93296 92064 -2 - 1233 hypothetical membrane protein - none -
fig|6666666.67496.peg.2216 CDS gi|512071492|gb|ATBY01000002.1| 94483 93356 -1 - 1128 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.67496.peg.2217 CDS gi|512071492|gb|ATBY01000002.1| 95979 94534 -3 - 1446 FIG00546199: hypothetical protein - none -
fig|6666666.67496.peg.2218 CDS gi|512071492|gb|ATBY01000002.1| 96059 97102 2 + 1044 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.67496.peg.2219 CDS gi|512071492|gb|ATBY01000002.1| 98465 97266 -2 - 1200 Mobile element protein - none -
fig|6666666.67496.peg.2220 CDS gi|512071492|gb|ATBY01000002.1| 100922 99030 -2 - 1893 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67496.peg.2221 CDS gi|512071492|gb|ATBY01000002.1| 101278 100919 -1 - 360 Transcriptional regulator ArsR family - none -
fig|6666666.67496.peg.2222 CDS gi|512071492|gb|ATBY01000002.1| 103129 102539 -1 - 591 hypothetical protein - none -
fig|6666666.67496.peg.2223 CDS gi|512071492|gb|ATBY01000002.1| 103882 103304 -1 - 579 hypothetical protein - none -
fig|6666666.67496.peg.2224 CDS gi|512071492|gb|ATBY01000002.1| 104358 103936 -3 - 423 putative membrane protein - none -
fig|6666666.67496.peg.2225 CDS gi|512071492|gb|ATBY01000002.1| 104870 104592 -2 - 279 hypothetical protein - none -
fig|6666666.67496.peg.2226 CDS gi|512071492|gb|ATBY01000002.1| 105555 105830 3 + 276 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.67496.peg.2227 CDS gi|512071492|gb|ATBY01000002.1| 106598 106104 -2 - 495 hypothetical membrane protein - none -
fig|6666666.67496.peg.2228 CDS gi|512071492|gb|ATBY01000002.1| 106650 107423 3 + 774 hypothetical protein - none -
fig|6666666.67496.peg.2229 CDS gi|512071492|gb|ATBY01000002.1| 108065 108250 2 + 186 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER - none -
fig|6666666.67496.peg.2230 CDS gi|512071492|gb|ATBY01000002.1| 108222 108641 3 + 420 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER - none -
fig|6666666.67496.peg.2231 CDS gi|512071492|gb|ATBY01000002.1| 108626 109375 2 + 750 ABC transporter permease protein - none -
fig|6666666.67496.peg.2232 CDS gi|512071492|gb|ATBY01000002.1| 110478 109420 -3 - 1059 Membrane protein, putative - none -
fig|6666666.67496.peg.2233 CDS gi|512071492|gb|ATBY01000002.1| 111159 110617 -3 - 543 FIG00544603: hypothetical protein - none -
fig|6666666.67496.peg.2234 CDS gi|512071492|gb|ATBY01000002.1| 111810 111166 -3 - 645 FIG00544264: hypothetical protein - none -
fig|6666666.67496.peg.2235 CDS gi|512071492|gb|ATBY01000002.1| 112090 114021 1 + 1932 GTP-binding protein TypA/BipA - none -
fig|6666666.67496.peg.2236 CDS gi|512071492|gb|ATBY01000002.1| 114306 115760 3 + 1455 LpqW - none -
fig|6666666.67496.peg.2237 CDS gi|512071492|gb|ATBY01000002.1| 115760 116587 2 + 828 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67496.peg.2238 CDS gi|512071492|gb|ATBY01000002.1| 116607 117050 3 + 444 hypothetical membrane protein - none -
fig|6666666.67496.peg.2239 CDS gi|512071492|gb|ATBY01000002.1| 117141 117013 -3 - 129 hypothetical protein - none -
fig|6666666.67496.peg.2240 CDS gi|512071492|gb|ATBY01000002.1| 117231 117377 3 + 147 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.67496.peg.2241 CDS gi|512071492|gb|ATBY01000002.1| 117511 118566 1 + 1056 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.2242 CDS gi|512071492|gb|ATBY01000002.1| 118579 119121 1 + 543 FIG00544080: hypothetical protein - none -
fig|6666666.67496.peg.2243 CDS gi|512071492|gb|ATBY01000002.1| 119493 122231 3 + 2739 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67496.peg.2244 CDS gi|512071492|gb|ATBY01000002.1| 122464 122652 1 + 189 putative uncharacterized membrane protein, ortholog YYAS B.subtilis - none -
fig|6666666.67496.peg.2245 CDS gi|512071492|gb|ATBY01000002.1| 122671 123069 1 + 399 hypothetical protein - none -
fig|6666666.67496.peg.2246 CDS gi|512071492|gb|ATBY01000002.1| 124911 123508 -3 - 1404 Phenylalanine-specific permease - none -
fig|6666666.67496.peg.2247 CDS gi|512071492|gb|ATBY01000002.1| 125851 124925 -1 - 927 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.2248 CDS gi|512071492|gb|ATBY01000002.1| 127391 125937 -2 - 1455 Phenylalanine-specific permease - none -
fig|6666666.67496.peg.2249 CDS gi|512071492|gb|ATBY01000002.1| 128448 127540 -3 - 909 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.2250 CDS gi|512071492|gb|ATBY01000002.1| 128498 129616 2 + 1119 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.2251 CDS gi|512071492|gb|ATBY01000002.1| 129845 130648 2 + 804 FIG00543965: hypothetical protein - none -
fig|6666666.67496.peg.2252 CDS gi|512071492|gb|ATBY01000002.1| 130670 131038 2 + 369 FIG00545506: hypothetical protein - none -
fig|6666666.67496.peg.2253 CDS gi|512071492|gb|ATBY01000002.1| 131676 132410 3 + 735 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67496.peg.2254 CDS gi|512071492|gb|ATBY01000002.1| 133804 132494 -1 - 1311 levanase/invertase - none -
fig|6666666.67496.peg.2255 CDS gi|512071492|gb|ATBY01000002.1| 135269 134106 -2 - 1164 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.67496.peg.2256 CDS gi|512071492|gb|ATBY01000002.1| 135222 135338 3 + 117 hypothetical protein - none -
fig|6666666.67496.peg.2257 CDS gi|512071492|gb|ATBY01000002.1| 135858 137075 3 + 1218 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.67496.peg.2258 CDS gi|512071492|gb|ATBY01000002.1| 137863 137252 -1 - 612 FIG00945644: hypothetical protein - none -
fig|6666666.67496.peg.2259 CDS gi|512071492|gb|ATBY01000002.1| 138157 138753 1 + 597 putative RNA polymerase sigma factor - none -
fig|6666666.67496.peg.2260 CDS gi|512071492|gb|ATBY01000002.1| 138914 139588 2 + 675 FIG00544000: hypothetical protein - none -
fig|6666666.67496.peg.2261 CDS gi|512071492|gb|ATBY01000002.1| 139756 140256 1 + 501 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67496.peg.2262 CDS gi|512071492|gb|ATBY01000002.1| 141450 140326 -3 - 1125 Mrp protein homolog - none -
fig|6666666.67496.peg.2263 CDS gi|512071492|gb|ATBY01000002.1| 142359 141766 -3 - 594 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.67496.peg.2264 CDS gi|512071492|gb|ATBY01000002.1| 143696 142362 -2 - 1335 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67496.peg.2265 CDS gi|512071492|gb|ATBY01000002.1| 144042 144671 3 + 630 hypothetical protein - none -
fig|6666666.67496.peg.2266 CDS gi|512071492|gb|ATBY01000002.1| 145785 144832 -3 - 954 Putative magnesium and cobalt transport protein - none -
fig|6666666.67496.peg.2267 CDS gi|512071492|gb|ATBY01000002.1| 146073 146777 3 + 705 FIG00544048: hypothetical protein - none -
fig|6666666.67496.peg.2268 CDS gi|512071492|gb|ATBY01000002.1| 147528 146968 -3 - 561 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67496.peg.2269 CDS gi|512071492|gb|ATBY01000002.1| 148631 147627 -2 - 1005 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.67496.peg.2270 CDS gi|512071492|gb|ATBY01000002.1| 152735 148956 -2 - 3780 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67496.peg.2271 CDS gi|512071492|gb|ATBY01000002.1| 157236 153370 -3 - 3867 FIG00543822: hypothetical protein - none -
fig|6666666.67496.peg.2272 CDS gi|512071492|gb|ATBY01000002.1| 158458 157592 -1 - 867 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.67496.peg.2273 CDS gi|512071492|gb|ATBY01000002.1| 158634 158509 -3 - 126 hypothetical protein - none -
fig|6666666.67496.peg.2274 CDS gi|512071492|gb|ATBY01000002.1| 159675 158857 -3 - 819 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67496.peg.2275 CDS gi|512071492|gb|ATBY01000002.1| 160120 160881 1 + 762 FIG00547507: hypothetical protein - none -
fig|6666666.67496.peg.2276 CDS gi|512071492|gb|ATBY01000002.1| 161115 161828 3 + 714 FIG00544678: hypothetical protein - none -
fig|6666666.67496.peg.2277 CDS gi|512071492|gb|ATBY01000002.1| 162221 161994 -2 - 228 FIG00547670: hypothetical protein - none -
fig|6666666.67496.peg.2278 CDS gi|512071492|gb|ATBY01000002.1| 163010 164233 2 + 1224 permease of the major facilitator superfamily - none -
fig|6666666.67496.peg.2279 CDS gi|512071492|gb|ATBY01000002.1| 164808 164374 -3 - 435 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67496.peg.2280 CDS gi|512071492|gb|ATBY01000002.1| 166587 165175 -3 - 1413 putative gamma-aminobutyrate permease - none -
fig|6666666.67496.peg.2281 CDS gi|512071492|gb|ATBY01000002.1| 167016 169091 3 + 2076 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67496.peg.2282 CDS gi|512071492|gb|ATBY01000002.1| 169179 169385 3 + 207 hypothetical protein - none -
fig|6666666.67496.peg.2283 CDS gi|512071492|gb|ATBY01000002.1| 169396 170592 1 + 1197 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.67496.peg.2284 CDS gi|512071492|gb|ATBY01000002.1| 171555 170728 -3 - 828 hypothetical protein - none -
fig|6666666.67496.peg.2285 CDS gi|512071492|gb|ATBY01000002.1| 172352 171552 -2 - 801 Hydrolase (HAD superfamily) - none -
fig|6666666.67496.peg.2286 CDS gi|512071492|gb|ATBY01000002.1| 173255 172785 -2 - 471 FIG00544250: hypothetical protein - none -
fig|6666666.67496.peg.2287 CDS gi|512071492|gb|ATBY01000002.1| 174062 173373 -2 - 690 hypothetical protein - none -
fig|6666666.67496.peg.2288 CDS gi|512071492|gb|ATBY01000002.1| 174753 174202 -3 - 552 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.67496.peg.2289 CDS gi|512071492|gb|ATBY01000002.1| 175745 174735 -2 - 1011 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.67496.peg.2290 CDS gi|512071492|gb|ATBY01000002.1| 176023 179130 1 + 3108 Helicase, SNF2/RAD54 family - none -
fig|6666666.67496.peg.2291 CDS gi|512071492|gb|ATBY01000002.1| 179114 179992 2 + 879 FIG00545674: hypothetical protein - none -
fig|6666666.67496.peg.2292 CDS gi|512071492|gb|ATBY01000002.1| 180375 181559 3 + 1185 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67496.peg.2293 CDS gi|512071492|gb|ATBY01000002.1| 181569 184205 3 + 2637 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67496.peg.2294 CDS gi|512071492|gb|ATBY01000002.1| 184808 184278 -2 - 531 Protein yceI precursor - none -
fig|6666666.67496.peg.2295 CDS gi|512071492|gb|ATBY01000002.1| 184950 185501 3 + 552 Transcriptional regulator, MarR family - none -
fig|6666666.67496.peg.2296 CDS gi|512071492|gb|ATBY01000002.1| 187137 185761 -3 - 1377 predicted hydrolase or acyltransferase - none -
fig|6666666.67496.peg.2297 CDS gi|512071492|gb|ATBY01000002.1| 188165 187506 -2 - 660 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.67496.peg.2298 CDS gi|512071492|gb|ATBY01000002.1| 189688 188165 -1 - 1524 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.67496.peg.2299 CDS gi|512071492|gb|ATBY01000002.1| 190470 189685 -3 - 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.67496.peg.2300 CDS gi|512071492|gb|ATBY01000002.1| 190932 192611 3 + 1680 L-lactate permease Lactate utilization
fig|6666666.67496.peg.2301 CDS gi|512071492|gb|ATBY01000002.1| 193206 194855 3 + 1650 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67496.peg.2302 CDS gi|512071492|gb|ATBY01000002.1| 194859 196250 3 + 1392 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67496.peg.2303 CDS gi|512071492|gb|ATBY01000002.1| 196868 196557 -2 - 312 hypothetical protein - none -
fig|6666666.67496.peg.2304 CDS gi|512071492|gb|ATBY01000002.1| 197187 196897 -3 - 291 hypothetical protein - none -
fig|6666666.67496.peg.2305 CDS gi|512071492|gb|ATBY01000002.1| 198337 197837 -1 - 501 hypothetical protein - none -
fig|6666666.67496.peg.2306 CDS gi|512071492|gb|ATBY01000002.1| 198698 200041 2 + 1344 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67496.peg.2307 CDS gi|512071492|gb|ATBY01000002.1| 200046 200972 3 + 927 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67496.peg.2308 CDS gi|512071492|gb|ATBY01000002.1| 202845 201082 -3 - 1764 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) / Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.67496.peg.2309 CDS gi|512071492|gb|ATBY01000002.1| 203578 202823 -1 - 756 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.67496.peg.2310 CDS gi|512071492|gb|ATBY01000002.1| 204374 203592 -2 - 783 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67496.peg.2311 CDS gi|512071492|gb|ATBY01000002.1| 205060 204371 -1 - 690 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67496.peg.2312 CDS gi|512071492|gb|ATBY01000002.1| 206691 205057 -3 - 1635 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67496.peg.2313 CDS gi|512071492|gb|ATBY01000002.1| 210377 206691 -2 - 3687 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67496.peg.2314 CDS gi|512071492|gb|ATBY01000002.1| 211656 210451 -3 - 1206 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67496.peg.2315 CDS gi|512071492|gb|ATBY01000002.1| 212067 212561 3 + 495 Molybdenum cofactor biosynthesis protein MoaB Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67496.peg.2316 CDS gi|512071492|gb|ATBY01000002.1| 213361 212750 -1 - 612 FIG00546849: hypothetical protein - none -
fig|6666666.67496.peg.2317 CDS gi|512071492|gb|ATBY01000002.1| 213834 213358 -3 - 477 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67496.peg.2318 CDS gi|512071492|gb|ATBY01000002.1| 215062 213887 -1 - 1176 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67496.peg.2319 CDS gi|512071492|gb|ATBY01000002.1| 215076 215489 3 + 414 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.67496.peg.2320 CDS gi|512071492|gb|ATBY01000002.1| 215660 216085 2 + 426 hypothetical protein - none -
fig|6666666.67496.peg.2321 CDS gi|512071492|gb|ATBY01000002.1| 216129 216461 3 + 333 hypothetical protein - none -
fig|6666666.67496.peg.2322 CDS gi|512071492|gb|ATBY01000002.1| 216831 216586 -3 - 246 hypothetical protein - none -
fig|6666666.67496.peg.2323 CDS gi|512071492|gb|ATBY01000002.1| 217744 216836 -1 - 909 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67496.peg.2324 CDS gi|512071492|gb|ATBY01000002.1| 218893 217961 -1 - 933 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67496.peg.2325 CDS gi|512071492|gb|ATBY01000002.1| 221040 219340 -3 - 1701 acyl-CoA synthetase - none -
fig|6666666.67496.peg.2326 CDS gi|512071492|gb|ATBY01000002.1| 221338 223248 1 + 1911 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67496.peg.2327 CDS gi|512071492|gb|ATBY01000002.1| 223249 224325 1 + 1077 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.67496.peg.2328 CDS gi|512071492|gb|ATBY01000002.1| 224360 225139 2 + 780 Methylase of polypeptide chain release factors - none -
fig|6666666.67496.peg.2329 CDS gi|512071492|gb|ATBY01000002.1| 225517 225645 1 + 129 Mobile element protein - none -
fig|6666666.67496.peg.2330 CDS gi|512071492|gb|ATBY01000002.1| 226347 226679 3 + 333 transposase - none -
fig|6666666.67496.peg.2331 CDS gi|512071492|gb|ATBY01000002.1| 227215 226919 -1 - 297 putative mercury resistance operon regulator MerR - none -
fig|6666666.67496.peg.2332 CDS gi|512071492|gb|ATBY01000002.1| 228072 227248 -3 - 825 Cobalt ABC transporter, ATP-binding component CbtL - none -
fig|6666666.67496.peg.2333 CDS gi|512071492|gb|ATBY01000002.1| 229055 228072 -2 - 984 Cobalt ABC transporter, permease component CbtK - none -
fig|6666666.67496.peg.2334 CDS gi|512071492|gb|ATBY01000002.1| 230085 229066 -3 - 1020 ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67496.peg.2335 CDS gi|512071492|gb|ATBY01000002.1| 230438 231028 2 + 591 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67496.peg.2336 CDS gi|512071492|gb|ATBY01000002.1| 231107 232237 2 + 1131 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67496.peg.2337 CDS gi|512071492|gb|ATBY01000002.1| 232240 232716 1 + 477 ATP synthase protein I - none -
fig|6666666.67496.peg.2338 CDS gi|512071492|gb|ATBY01000002.1| 232932 233744 3 + 813 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2339 CDS gi|512071492|gb|ATBY01000002.1| 233848 234090 1 + 243 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2340 CDS gi|512071492|gb|ATBY01000002.1| 234115 234702 1 + 588 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2341 CDS gi|512071492|gb|ATBY01000002.1| 234708 235526 3 + 819 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2342 CDS gi|512071492|gb|ATBY01000002.1| 235583 237232 2 + 1650 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2343 CDS gi|512071492|gb|ATBY01000002.1| 237288 238259 3 + 972 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2344 CDS gi|512071492|gb|ATBY01000002.1| 238263 239705 3 + 1443 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2345 CDS gi|512071492|gb|ATBY01000002.1| 239698 240075 1 + 378 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67496.peg.2346 CDS gi|512071492|gb|ATBY01000002.1| 240436 240843 1 + 408 hypothetical protein - none -
fig|6666666.67496.peg.2347 CDS gi|512071492|gb|ATBY01000002.1| 240858 241550 3 + 693 FIG00996186: hypothetical protein - none -
fig|6666666.67496.peg.2348 CDS gi|512071492|gb|ATBY01000002.1| 241612 241842 1 + 231 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.67496.peg.2349 CDS gi|512071492|gb|ATBY01000002.1| 242550 242092 -3 - 459 Methylmalonyl-CoA epimerase (EC 5.1.99.1); Ethylmalonyl-CoA epimerase - none -
fig|6666666.67496.peg.2350 CDS gi|512071492|gb|ATBY01000002.1| 242575 242868 1 + 294 FIG00544011: hypothetical protein - none -
fig|6666666.67496.peg.2351 CDS gi|512071492|gb|ATBY01000002.1| 242869 243648 1 + 780 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67496.peg.2352 CDS gi|512071492|gb|ATBY01000002.1| 244023 243742 -3 - 282 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67496.peg.2353 CDS gi|512071760|gb|ATBY01000001.1| 6101 5808 -2 - 294 hypothetical protein - none -
fig|6666666.67496.peg.2354 CDS gi|512071760|gb|ATBY01000001.1| 7224 6208 -3 - 1017 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67496.peg.2355 CDS gi|512071760|gb|ATBY01000001.1| 7542 7237 -3 - 306 hypothetical protein - none -
fig|6666666.67496.peg.2356 CDS gi|512071760|gb|ATBY01000001.1| 9799 7529 -1 - 2271 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67496.peg.2357 CDS gi|512071760|gb|ATBY01000001.1| 10069 9866 -1 - 204 Copper chaperone Copper homeostasis
fig|6666666.67496.peg.2358 CDS gi|512071760|gb|ATBY01000001.1| 10846 10214 -1 - 633 FIG00546748: hypothetical protein - none -
fig|6666666.67496.peg.2359 CDS gi|512071760|gb|ATBY01000001.1| 12517 10850 -1 - 1668 DNA repair helicase - none -
fig|6666666.67496.peg.2360 CDS gi|512071760|gb|ATBY01000001.1| 14937 12667 -3 - 2271 FIG00545438: hypothetical protein - none -
fig|6666666.67496.peg.2361 CDS gi|512071760|gb|ATBY01000001.1| 15137 15400 2 + 264 FIG00543815: hypothetical protein - none -
fig|6666666.67496.peg.2362 CDS gi|512071760|gb|ATBY01000001.1| 16356 15712 -3 - 645 FIG00996461: hypothetical protein - none -
fig|6666666.67496.peg.2363 CDS gi|512071760|gb|ATBY01000001.1| 17031 17420 3 + 390 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67496.peg.2364 CDS gi|512071760|gb|ATBY01000001.1| 18112 17600 -1 - 513 FIG00545981: hypothetical protein - none -
fig|6666666.67496.peg.2365 CDS gi|512071760|gb|ATBY01000001.1| 18895 18131 -1 - 765 glutamine cyclotransferase - none -
fig|6666666.67496.peg.2366 CDS gi|512071760|gb|ATBY01000001.1| 19220 18933 -2 - 288 hypothetical protein - none -
fig|6666666.67496.peg.2367 CDS gi|512071760|gb|ATBY01000001.1| 19221 19856 3 + 636 FIG00546806: hypothetical protein - none -
fig|6666666.67496.peg.2368 CDS gi|512071760|gb|ATBY01000001.1| 20158 21708 1 + 1551 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67496.peg.2369 CDS gi|512071760|gb|ATBY01000001.1| 21719 22537 2 + 819 putative rRNA methylase - none -
fig|6666666.67496.peg.2370 CDS gi|512071760|gb|ATBY01000001.1| 22587 24104 3 + 1518 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67496.peg.2371 CDS gi|512071760|gb|ATBY01000001.1| 25114 24215 -1 - 900 FIG00544583: hypothetical protein - none -
fig|6666666.67496.peg.2372 CDS gi|512071760|gb|ATBY01000001.1| 26026 25115 -1 - 912 FIG00545091: hypothetical protein - none -
fig|6666666.67496.peg.2373 CDS gi|512071760|gb|ATBY01000001.1| 27298 26174 -1 - 1125 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67496.peg.2374 CDS gi|512071760|gb|ATBY01000001.1| 27838 29136 1 + 1299 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67496.peg.2375 CDS gi|512071760|gb|ATBY01000001.1| 29363 29731 2 + 369 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67496.peg.2376 CDS gi|512071760|gb|ATBY01000001.1| 31327 29786 -1 - 1542 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67496.peg.2377 CDS gi|512071760|gb|ATBY01000001.1| 31370 32266 2 + 897 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67496.peg.2378 CDS gi|512071760|gb|ATBY01000001.1| 32270 32971 2 + 702 Enoyl-CoA hydratase (EC 4.2.1.17) - none -
fig|6666666.67496.peg.2379 CDS gi|512071760|gb|ATBY01000001.1| 33093 34457 3 + 1365 Na+/H+ antiporter - none -
fig|6666666.67496.peg.2380 CDS gi|512071760|gb|ATBY01000001.1| 34973 35128 2 + 156 hypothetical protein - none -
fig|6666666.67496.peg.2381 CDS gi|512071760|gb|ATBY01000001.1| 35965 35171 -1 - 795 Putative secreted protein - none -
fig|6666666.67496.peg.2382 CDS gi|512071760|gb|ATBY01000001.1| 36566 36844 2 + 279 FIG00544401: hypothetical protein - none -
fig|6666666.67496.peg.2383 CDS gi|512071760|gb|ATBY01000001.1| 36837 37589 3 + 753 Precorrin-6A synthase (EC 2.1.1.152) - none -
fig|6666666.67496.peg.2384 CDS gi|512071760|gb|ATBY01000001.1| 37853 37695 -2 - 159 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.67496.peg.2385 CDS gi|512071760|gb|ATBY01000001.1| 38482 37970 -1 - 513 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67496.peg.2386 CDS gi|512071760|gb|ATBY01000001.1| 39291 38491 -3 - 801 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.67496.peg.2387 CDS gi|512071760|gb|ATBY01000001.1| 40143 39385 -3 - 759 inositol monophosphatase family protein - none -
fig|6666666.67496.peg.2388 CDS gi|512071760|gb|ATBY01000001.1| 40307 45199 2 + 4893 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67496.peg.2389 CDS gi|512071760|gb|ATBY01000001.1| 45186 46007 3 + 822 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67496.peg.2390 CDS gi|512071760|gb|ATBY01000001.1| 46689 46069 -3 - 621 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67496.peg.2391 CDS gi|512071760|gb|ATBY01000001.1| 46980 47393 3 + 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67496.peg.2392 CDS gi|512071760|gb|ATBY01000001.1| 49136 47496 -2 - 1641 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67496.peg.2393 CDS gi|512071760|gb|ATBY01000001.1| 50460 49327 -3 - 1134 hypothetical protein - none -
fig|6666666.67496.peg.2394 CDS gi|512071760|gb|ATBY01000001.1| 50678 52168 2 + 1491 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67496.peg.2395 CDS gi|512071760|gb|ATBY01000001.1| 52653 54248 3 + 1596 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.67496.peg.2396 CDS gi|512071760|gb|ATBY01000001.1| 54467 55393 2 + 927 ABC-type transporter, permease component - none -
fig|6666666.67496.peg.2397 CDS gi|512071760|gb|ATBY01000001.1| 55386 56510 3 + 1125 ABC-type transporter, permease component - none -
fig|6666666.67496.peg.2398 CDS gi|512071760|gb|ATBY01000001.1| 56510 58264 2 + 1755 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.67496.peg.2399 CDS gi|512071760|gb|ATBY01000001.1| 58604 58329 -2 - 276 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67496.peg.2400 CDS gi|512071760|gb|ATBY01000001.1| 58627 60831 1 + 2205 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67496.peg.2401 CDS gi|512071760|gb|ATBY01000001.1| 61899 61177 -3 - 723 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67496.peg.2402 CDS gi|512071760|gb|ATBY01000001.1| 62169 64022 3 + 1854 FIG00544804: hypothetical protein - none -
fig|6666666.67496.peg.2403 CDS gi|512071760|gb|ATBY01000001.1| 64183 64509 1 + 327 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.67496.peg.2404 CDS gi|512071760|gb|ATBY01000001.1| 64496 66043 2 + 1548 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67496.peg.2405 CDS gi|512071760|gb|ATBY01000001.1| 66390 67241 3 + 852 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.67496.peg.2406 CDS gi|512071760|gb|ATBY01000001.1| 67551 67303 -3 - 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.67496.peg.2407 CDS gi|512071760|gb|ATBY01000001.1| 67875 67570 -3 - 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.67496.peg.2408 CDS gi|512071760|gb|ATBY01000001.1| 68043 67879 -3 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67496.peg.2409 CDS gi|512071760|gb|ATBY01000001.1| 68285 68049 -2 - 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67496.peg.2410 CDS gi|512071760|gb|ATBY01000001.1| 69012 68458 -3 - 555 acetyltransferase (GNAT) family protein - none -
fig|6666666.67496.peg.2411 CDS gi|512071760|gb|ATBY01000001.1| 69429 69704 3 + 276 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.67496.peg.2412 CDS gi|512071760|gb|ATBY01000001.1| 69704 69877 2 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67496.peg.2413 CDS gi|512071760|gb|ATBY01000001.1| 70377 71069 3 + 693 two-component system, response regulator - none -
fig|6666666.67496.peg.2414 CDS gi|512071760|gb|ATBY01000001.1| 71180 72568 2 + 1389 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.67496.peg.2415 CDS gi|512071760|gb|ATBY01000001.1| 72580 73731 1 + 1152 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67496.peg.2416 CDS gi|512071760|gb|ATBY01000001.1| 73742 74272 2 + 531 molybdopterin biosynthesis enzyme - none -
fig|6666666.67496.peg.2417 CDS gi|512071760|gb|ATBY01000001.1| 75002 74460 -2 - 543 FIG00546567: hypothetical protein - none -
fig|6666666.67496.peg.2418 CDS gi|512071760|gb|ATBY01000001.1| 75894 75088 -3 - 807 hypothetical protein - none -
fig|6666666.67496.peg.2419 CDS gi|512071760|gb|ATBY01000001.1| 76475 75909 -2 - 567 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67496.peg.2420 CDS gi|512071760|gb|ATBY01000001.1| 76529 77428 2 + 900 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67496.peg.2421 CDS gi|512071760|gb|ATBY01000001.1| 77594 78865 2 + 1272 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.67496.peg.2422 CDS gi|512071760|gb|ATBY01000001.1| 78869 79534 2 + 666 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.67496.peg.2423 CDS gi|512071760|gb|ATBY01000001.1| 79638 80759 3 + 1122 FIG00544639: hypothetical protein - none -
fig|6666666.67496.peg.2424 CDS gi|512071760|gb|ATBY01000001.1| 81452 81865 2 + 414 FIG00544115: hypothetical protein - none -
fig|6666666.67496.peg.2425 CDS gi|512071760|gb|ATBY01000001.1| 81858 82529 3 + 672 hypothetical membrane protein - none -
fig|6666666.67496.peg.2426 CDS gi|512071760|gb|ATBY01000001.1| 84008 82596 -2 - 1413 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67496.peg.2427 CDS gi|512071760|gb|ATBY01000001.1| 84141 85028 3 + 888 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67496.peg.2428 CDS gi|512071760|gb|ATBY01000001.1| 85318 87045 1 + 1728 High-affinity choline uptake protein BetT Niacin-Choline transport and metabolism
fig|6666666.67496.peg.2429 CDS gi|512071760|gb|ATBY01000001.1| 87375 87085 -3 - 291 hypothetical protein - none -
fig|6666666.67496.peg.2430 CDS gi|512071760|gb|ATBY01000001.1| 87328 89139 1 + 1812 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67496.peg.2431 CDS gi|512071760|gb|ATBY01000001.1| 89941 89420 -1 - 522 GCN5-related N-acetyltransferase - none -
fig|6666666.67496.peg.2432 CDS gi|512071760|gb|ATBY01000001.1| 90045 90914 3 + 870 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67496.peg.2433 CDS gi|512071760|gb|ATBY01000001.1| 91159 92463 1 + 1305 Cell wall-binding protein - none -
fig|6666666.67496.peg.2434 CDS gi|512071760|gb|ATBY01000001.1| 92529 93386 3 + 858 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.67496.peg.2435 CDS gi|512071760|gb|ATBY01000001.1| 93380 94270 2 + 891 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67496.peg.2436 CDS gi|512071760|gb|ATBY01000001.1| 94309 96108 1 + 1800 ABC transporter, ATP-binding protein - none -
fig|6666666.67496.peg.2437 CDS gi|512071760|gb|ATBY01000001.1| 96208 96531 1 + 324 FIG00544339: hypothetical protein - none -
fig|6666666.67496.peg.2438 CDS gi|512071760|gb|ATBY01000001.1| 96595 97653 1 + 1059 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67496.peg.2439 CDS gi|512071760|gb|ATBY01000001.1| 97973 98944 2 + 972 hypothetical protein - none -
fig|6666666.67496.peg.2440 CDS gi|512071760|gb|ATBY01000001.1| 100354 99263 -1 - 1092 hypothetical protein - none -
fig|6666666.67496.peg.2441 CDS gi|512071760|gb|ATBY01000001.1| 100971 100375 -3 - 597 Transcriptional regulator, TetR family - none -
fig|6666666.67496.peg.2442 CDS gi|512071760|gb|ATBY01000001.1| 102739 101102 -1 - 1638 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67496.peg.2443 CDS gi|512071760|gb|ATBY01000001.1| 102908 104383 2 + 1476 PROBABLE C4-DICARBOXYLATE-TRANSPORT TRANSMEMBRANE PROTEIN DCTA - none -
fig|6666666.67496.peg.2444 CDS gi|512071760|gb|ATBY01000001.1| 105189 104710 -3 - 480 Mobile element protein - none -
fig|6666666.67496.rna.1 RNA gi|512068193|gb|ATBY01000017.1| 57104 57031 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.67496.rna.2 RNA gi|512068193|gb|ATBY01000017.1| 315680 315608 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.67496.rna.3 RNA gi|512068193|gb|ATBY01000017.1| 315833 315760 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.67496.rna.4 RNA gi|512068193|gb|ATBY01000017.1| 315928 315856 -1 - 73 tRNA-Thr-GGT - none -
fig|6666666.67496.rna.5 RNA gi|512068193|gb|ATBY01000017.1| 316456 316374 -1 - 83 tRNA-Tyr-GTA - none -
fig|6666666.67496.rna.6 RNA gi|512068193|gb|ATBY01000017.1| 393131 393059 -2 - 73 tRNA-Thr-CGT - none -
fig|6666666.67496.rna.7 RNA gi|512068193|gb|ATBY01000017.1| 435619 435692 1 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.67496.rna.8 RNA gi|512068193|gb|ATBY01000017.1| 472466 472382 -2 - 85 tRNA-Pseudo-GGA - none -
fig|6666666.67496.rna.9 RNA gi|512068193|gb|ATBY01000017.1| 491198 491111 -2 - 88 tRNA-Ser-CGA tRNAs
fig|6666666.67496.rna.10 RNA gi|512068193|gb|ATBY01000017.1| 495373 495301 -1 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67496.rna.11 RNA gi|512068193|gb|ATBY01000017.1| 495494 495406 -2 - 89 tRNA-Ser-GCT - none -
fig|6666666.67496.rna.12 RNA gi|512068193|gb|ATBY01000017.1| 497839 497755 -1 - 85 tRNA-Ser-TGA - none -
fig|6666666.67496.rna.13 RNA gi|512068714|gb|ATBY01000016.1| 74307 74391 3 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.67496.rna.14 RNA gi|512068965|gb|ATBY01000015.1| 67227 67297 3 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.67496.rna.15 RNA gi|512068965|gb|ATBY01000015.1| 229387 229266 -1 - 122 5S RNA - none -
fig|6666666.67496.rna.16 RNA gi|512068965|gb|ATBY01000015.1| 232602 229491 -3 - 3112 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67496.rna.17 RNA gi|512068965|gb|ATBY01000015.1| 234462 232974 -3 - 1489 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67496.rna.18 RNA gi|512068965|gb|ATBY01000015.1| 361824 361897 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.67496.rna.19 RNA gi|512068965|gb|ATBY01000015.1| 361909 361981 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.67496.rna.20 RNA gi|512069751|gb|ATBY01000014.1| 553 1 -1 - 553 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67496.rna.21 RNA gi|512069751|gb|ATBY01000014.1| 20388 20316 -3 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.67496.rna.22 RNA gi|512069751|gb|ATBY01000014.1| 20463 20390 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.67496.rna.23 RNA gi|512069751|gb|ATBY01000014.1| 20703 20630 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.67496.rna.24 RNA gi|512069751|gb|ATBY01000014.1| 20801 20729 -2 - 73 tRNA-Glu-TTC - none -
fig|6666666.67496.rna.25 RNA gi|512069751|gb|ATBY01000014.1| 21480 21552 3 + 73 tRNA-Lys-TTT - none -
fig|6666666.67496.rna.26 RNA gi|512069751|gb|ATBY01000014.1| 67057 66985 -1 - 73 tRNA-Thr-TGT - none -
fig|6666666.67496.rna.27 RNA gi|512069927|gb|ATBY01000013.1| 8341 8268 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.67496.rna.28 RNA gi|512069927|gb|ATBY01000013.1| 14767 14696 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.67496.rna.29 RNA gi|512069927|gb|ATBY01000013.1| 64953 65026 3 + 74 tRNA-Arg-TCT - none -
fig|6666666.67496.rna.30 RNA gi|512069927|gb|ATBY01000013.1| 83188 83260 1 + 73 tRNA-His-GTG - none -
fig|6666666.67496.rna.31 RNA gi|512069927|gb|ATBY01000013.1| 86832 86904 3 + 73 tRNA-Lys-CTT - none -
fig|6666666.67496.rna.32 RNA gi|512069927|gb|ATBY01000013.1| 101051 100970 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.67496.rna.33 RNA gi|512069927|gb|ATBY01000013.1| 148876 148804 -1 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.67496.rna.34 RNA gi|512069927|gb|ATBY01000013.1| 166999 166878 -1 - 122 5S RNA - none -
fig|6666666.67496.rna.35 RNA gi|512069927|gb|ATBY01000013.1| 170214 167103 -3 - 3112 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67496.rna.36 RNA gi|512069927|gb|ATBY01000013.1| 172076 170588 -2 - 1489 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67496.rna.37 RNA gi|512070320|gb|ATBY01000012.1| 53637 53565 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.67496.rna.38 RNA gi|512070320|gb|ATBY01000012.1| 64703 64631 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.67496.rna.39 RNA gi|512070320|gb|ATBY01000012.1| 64818 64891 3 + 74 tRNA-Met-CAT - none -
fig|6666666.67496.rna.40 RNA gi|512070728|gb|ATBY01000009.1| 1 377 1 + 377 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67496.rna.41 RNA gi|512070728|gb|ATBY01000009.1| 483 604 3 + 122 5S RNA - none -
fig|6666666.67496.rna.42 RNA gi|512070728|gb|ATBY01000009.1| 31826 31753 -2 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.67496.rna.43 RNA gi|512070728|gb|ATBY01000009.1| 108717 108803 3 + 87 tRNA-Leu-GAG tRNAs
fig|6666666.67496.rna.44 RNA gi|512070728|gb|ATBY01000009.1| 275772 275702 -3 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.67496.rna.45 RNA gi|512070728|gb|ATBY01000009.1| 275902 275830 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67496.rna.46 RNA gi|512070728|gb|ATBY01000009.1| 275993 275922 -2 - 72 tRNA-Val-GAC tRNAs
fig|6666666.67496.rna.47 RNA gi|512070728|gb|ATBY01000009.1| 276090 276018 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67496.rna.48 RNA gi|512070728|gb|ATBY01000009.1| 276503 276574 2 + 72 tRNA-Val-CAC tRNAs
fig|6666666.67496.rna.49 RNA gi|512071173|gb|ATBY01000007.1| 24201 24119 -3 - 83 tRNA-Leu-CAA tRNAs
fig|6666666.67496.rna.50 RNA gi|512071233|gb|ATBY01000006.1| 49369 49440 1 + 72 tRNA-Gln-CTG - none -
fig|6666666.67496.rna.51 RNA gi|512071233|gb|ATBY01000006.1| 49498 49570 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.67496.rna.52 RNA gi|512071233|gb|ATBY01000006.1| 61239 61311 3 + 73 tRNA-Glu-CTC - none -
fig|6666666.67496.rna.53 RNA gi|512071492|gb|ATBY01000002.1| 10353 10283 -3 - 71 tRNA-Gln-TTG - none -
fig|6666666.67496.rna.54 RNA gi|512071492|gb|ATBY01000002.1| 21232 21305 1 + 74 tRNA-Leu-TAA - none -
fig|6666666.67496.rna.55 RNA gi|512071492|gb|ATBY01000002.1| 185623 185551 -1 - 73 tRNA-Arg-CCG tRNAs
fig|6666666.67496.rna.56 RNA gi|512071760|gb|ATBY01000001.1| 76 1564 1 + 1489 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67496.rna.57 RNA gi|512071760|gb|ATBY01000001.1| 1932 5043 3 + 3112 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67496.rna.58 RNA gi|512071760|gb|ATBY01000001.1| 5151 5272 3 + 122 5S RNA - none -
fig|6666666.67496.rna.59 RNA gi|512071760|gb|ATBY01000001.1| 36434 36362 -2 - 73 tRNA-Arg-CCT - none -
fig|6666666.67496.rna.60 RNA gi|512071760|gb|ATBY01000001.1| 80807 80879 2 + 73 tRNA-Ala-CGC tRNAs