fig|6666666.67501.peg.1 CDS gi|393401708|dbj|AP012284.1| 158 310 2 + 153 hypothetical protein - none -
fig|6666666.67501.peg.2 CDS gi|393401708|dbj|AP012284.1| 394 2220 1 + 1827 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67501.peg.3 CDS gi|393401708|dbj|AP012284.1| 2809 3996 1 + 1188 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67501.peg.4 CDS gi|393401708|dbj|AP012284.1| 4059 5294 3 + 1236 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67501.peg.5 CDS gi|393401708|dbj|AP012284.1| 5275 5847 1 + 573 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67501.peg.6 CDS gi|393401708|dbj|AP012284.1| 5987 8032 2 + 2046 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67501.peg.7 CDS gi|393401708|dbj|AP012284.1| 8550 8116 -3 - 435 FIG00544172: hypothetical protein - none -
fig|6666666.67501.peg.8 CDS gi|393401708|dbj|AP012284.1| 9007 9189 1 + 183 hypothetical protein - none -
fig|6666666.67501.peg.9 CDS gi|393401708|dbj|AP012284.1| 9367 9158 -1 - 210 hypothetical protein - none -
fig|6666666.67501.peg.10 CDS gi|393401708|dbj|AP012284.1| 9535 12099 1 + 2565 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67501.peg.11 CDS gi|393401708|dbj|AP012284.1| 12099 12443 3 + 345 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67501.peg.12 CDS gi|393401708|dbj|AP012284.1| 12876 13655 3 + 780 hypothetical protein - none -
fig|6666666.67501.peg.13 CDS gi|393401708|dbj|AP012284.1| 13981 14508 1 + 528 hypothetical protein - none -
fig|6666666.67501.peg.14 CDS gi|393401708|dbj|AP012284.1| 15198 16142 3 + 945 Inositol transport system sugar-binding protein - none -
fig|6666666.67501.peg.15 CDS gi|393401708|dbj|AP012284.1| 16139 17221 2 + 1083 Probable ABC transport protein, membrane component - none -
fig|6666666.67501.peg.16 CDS gi|393401708|dbj|AP012284.1| 17222 17995 2 + 774 Inositol transport system ATP-binding protein - none -
fig|6666666.67501.peg.17 CDS gi|393401708|dbj|AP012284.1| 18782 18078 -2 - 705 FIG00545776: hypothetical protein - none -
fig|6666666.67501.peg.18 CDS gi|393401708|dbj|AP012284.1| 18859 19395 1 + 537 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.67501.peg.19 CDS gi|393401708|dbj|AP012284.1| 19555 19385 -1 - 171 hypothetical protein - none -
fig|6666666.67501.peg.20 CDS gi|393401708|dbj|AP012284.1| 19530 20219 3 + 690 hypothetical protein - none -
fig|6666666.67501.peg.21 CDS gi|393401708|dbj|AP012284.1| 20621 20478 -2 - 144 hypothetical protein - none -
fig|6666666.67501.peg.22 CDS gi|393401708|dbj|AP012284.1| 21280 23205 1 + 1926 hypothetical protein - none -
fig|6666666.67501.peg.23 CDS gi|393401708|dbj|AP012284.1| 23666 23280 -2 - 387 hypothetical protein - none -
fig|6666666.67501.peg.24 CDS gi|393401708|dbj|AP012284.1| 23716 23886 1 + 171 hypothetical protein - none -
fig|6666666.67501.peg.25 CDS gi|393401708|dbj|AP012284.1| 24786 24214 -3 - 573 hypothetical protein - none -
fig|6666666.67501.peg.26 CDS gi|393401708|dbj|AP012284.1| 25810 24773 -1 - 1038 hypothetical protein - none -
fig|6666666.67501.peg.27 CDS gi|393401708|dbj|AP012284.1| 26013 25792 -3 - 222 hypothetical protein - none -
fig|6666666.67501.peg.28 CDS gi|393401708|dbj|AP012284.1| 26295 26077 -3 - 219 hypothetical protein - none -
fig|6666666.67501.peg.29 CDS gi|393401708|dbj|AP012284.1| 26446 26282 -1 - 165 hypothetical protein - none -
fig|6666666.67501.peg.30 CDS gi|393401708|dbj|AP012284.1| 26550 26756 3 + 207 hypothetical protein - none -
fig|6666666.67501.peg.31 CDS gi|393401708|dbj|AP012284.1| 27043 26873 -1 - 171 hypothetical protein - none -
fig|6666666.67501.peg.32 CDS gi|393401708|dbj|AP012284.1| 27249 27130 -3 - 120 hypothetical protein - none -
fig|6666666.67501.peg.33 CDS gi|393401708|dbj|AP012284.1| 27376 27492 1 + 117 hypothetical protein - none -
fig|6666666.67501.peg.34 CDS gi|393401708|dbj|AP012284.1| 28714 28343 -1 - 372 CRISPR-associated protein, Cas2 - none -
fig|6666666.67501.peg.35 CDS gi|393401708|dbj|AP012284.1| 29668 28715 -1 - 954 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.67501.peg.36 CDS gi|393401708|dbj|AP012284.1| 32358 29665 -3 - 2694 CRISPR-associated helicase Cas3, protein CRISPRs
fig|6666666.67501.peg.37 CDS gi|393401708|dbj|AP012284.1| 33089 32379 -2 - 711 CRISPR-associated protein, Cse3 family CRISPRs
fig|6666666.67501.peg.38 CDS gi|393401708|dbj|AP012284.1| 33305 34918 2 + 1614 No significant database matches - none -
fig|6666666.67501.peg.39 CDS gi|393401708|dbj|AP012284.1| 35107 35508 1 + 402 No significant database matches - none -
fig|6666666.67501.peg.40 CDS gi|393401708|dbj|AP012284.1| 35508 36575 3 + 1068 CRISPR-associated protein, CT1975 family - none -
fig|6666666.67501.peg.41 CDS gi|393401708|dbj|AP012284.1| 36587 37279 2 + 693 hypothetical protein - none -
fig|6666666.67501.peg.42 CDS gi|393401708|dbj|AP012284.1| 38390 37356 -2 - 1035 transposase for IS3509b - none -
fig|6666666.67501.peg.43 CDS gi|393401708|dbj|AP012284.1| 38802 39728 3 + 927 Phospholipase D precursor (EC 3.1.4.4) (PLD) (Choline phosphatase) - none -
fig|6666666.67501.peg.44 CDS gi|393401708|dbj|AP012284.1| 40654 39788 -1 - 867 Putative iron-siderophore uptake system ATP-binding component - none -
fig|6666666.67501.peg.45 CDS gi|393401708|dbj|AP012284.1| 41649 40663 -3 - 987 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67501.peg.46 CDS gi|393401708|dbj|AP012284.1| 42569 41649 -2 - 921 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67501.peg.47 CDS gi|393401708|dbj|AP012284.1| 42763 43815 1 + 1053 hypothetical protein - none -
fig|6666666.67501.peg.48 CDS gi|393401708|dbj|AP012284.1| 44261 43992 -2 - 270 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67501.peg.49 CDS gi|393401708|dbj|AP012284.1| 46368 44374 -3 - 1995 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.67501.peg.50 CDS gi|393401708|dbj|AP012284.1| 47885 46365 -2 - 1521 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67501.peg.51 CDS gi|393401708|dbj|AP012284.1| 49353 47893 -3 - 1461 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.52 CDS gi|393401708|dbj|AP012284.1| 50723 49350 -2 - 1374 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67501.peg.53 CDS gi|393401708|dbj|AP012284.1| 52235 50724 -2 - 1512 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67501.peg.54 CDS gi|393401708|dbj|AP012284.1| 52714 52235 -1 - 480 FIG00818182: hypothetical protein - none -
fig|6666666.67501.peg.55 CDS gi|393401708|dbj|AP012284.1| 53738 52791 -2 - 948 FIG00543872: hypothetical protein - none -
fig|6666666.67501.peg.56 CDS gi|393401708|dbj|AP012284.1| 56232 54682 -3 - 1551 hypothetical protein - none -
fig|6666666.67501.peg.57 CDS gi|393401708|dbj|AP012284.1| 56673 56317 -3 - 357 hypothetical protein - none -
fig|6666666.67501.peg.58 CDS gi|393401708|dbj|AP012284.1| 56732 57520 2 + 789 hypothetical protein - none -
fig|6666666.67501.peg.59 CDS gi|393401708|dbj|AP012284.1| 57749 57913 2 + 165 hypothetical protein - none -
fig|6666666.67501.peg.60 CDS gi|393401708|dbj|AP012284.1| 58233 58427 3 + 195 hypothetical protein - none -
fig|6666666.67501.peg.61 CDS gi|393401708|dbj|AP012284.1| 59615 58902 -2 - 714 putative CAAX amino terminal protease family protein - none -
fig|6666666.67501.peg.62 CDS gi|393401708|dbj|AP012284.1| 60461 59643 -2 - 819 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67501.peg.63 CDS gi|393401708|dbj|AP012284.1| 61084 60554 -1 - 531 Conserved protein - none -
fig|6666666.67501.peg.64 CDS gi|393401708|dbj|AP012284.1| 61404 61081 -3 - 324 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67501.peg.65 CDS gi|393401708|dbj|AP012284.1| 62627 61629 -2 - 999 periplasmic binding protein - none -
fig|6666666.67501.peg.66 CDS gi|393401708|dbj|AP012284.1| 63407 62637 -2 - 771 ABC transporter iron(III)/siderophore transport system ATP-binding protein - none -
fig|6666666.67501.peg.67 CDS gi|393401708|dbj|AP012284.1| 64510 63404 -1 - 1107 ABC transporter iron(III)/siderophore permease protein - none -
fig|6666666.67501.peg.68 CDS gi|393401708|dbj|AP012284.1| 65994 64612 -3 - 1383 magnesium transport protein - none -
fig|6666666.67501.peg.69 CDS gi|393401708|dbj|AP012284.1| 67999 66401 -1 - 1599 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.67501.peg.70 CDS gi|393401708|dbj|AP012284.1| 69519 68047 -3 - 1473 Lantibiotic ABC transporter - none -
fig|6666666.67501.peg.71 CDS gi|393401708|dbj|AP012284.1| 70214 69519 -2 - 696 ABC transport system ATP-binding protein - none -
fig|6666666.67501.peg.72 CDS gi|393401708|dbj|AP012284.1| 70729 70355 -1 - 375 hypothetical protein - none -
fig|6666666.67501.peg.73 CDS gi|393401708|dbj|AP012284.1| 71450 70794 -2 - 657 DNA-binding response regulator, LuxR family - none -
fig|6666666.67501.peg.74 CDS gi|393401708|dbj|AP012284.1| 72559 71447 -1 - 1113 hypothetical protein - none -
fig|6666666.67501.peg.75 CDS gi|393401708|dbj|AP012284.1| 73059 72643 -3 - 417 hypothetical protein - none -
fig|6666666.67501.peg.76 CDS gi|393401708|dbj|AP012284.1| 74185 73214 -1 - 972 hypothetical protein - none -
fig|6666666.67501.peg.77 CDS gi|393401708|dbj|AP012284.1| 74468 74250 -2 - 219 hypothetical protein - none -
fig|6666666.67501.peg.78 CDS gi|393401708|dbj|AP012284.1| 74595 74470 -3 - 126 hypothetical protein - none -
fig|6666666.67501.peg.79 CDS gi|393401708|dbj|AP012284.1| 75368 74724 -2 - 645 FIG111991: hypothetical protein CBSS-313593.3.peg.2729
fig|6666666.67501.peg.80 CDS gi|393401708|dbj|AP012284.1| 75916 75365 -1 - 552 RNA polymerase sigma-70 factor CBSS-313593.3.peg.2729;
Transcription initiation, bacterial sigma factors
fig|6666666.67501.peg.81 CDS gi|393401708|dbj|AP012284.1| 76335 76012 -3 - 324 hypothetical protein - none -
fig|6666666.67501.peg.82 CDS gi|393401708|dbj|AP012284.1| 76684 76526 -1 - 159 hypothetical protein - none -
fig|6666666.67501.peg.83 CDS gi|393401708|dbj|AP012284.1| 76683 78320 3 + 1638 DipZ protein - none -
fig|6666666.67501.peg.84 CDS gi|393401708|dbj|AP012284.1| 78531 79157 3 + 627 similar to superfamily I DNA and RNA helicases and helicase subunits - none -
fig|6666666.67501.peg.85 CDS gi|393401708|dbj|AP012284.1| 79821 79159 -3 - 663 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67501.peg.86 CDS gi|393401708|dbj|AP012284.1| 80456 79818 -2 - 639 choline transport system permease protein - none -
fig|6666666.67501.peg.87 CDS gi|393401708|dbj|AP012284.1| 81340 80453 -1 - 888 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67501.peg.88 CDS gi|393401708|dbj|AP012284.1| 82239 81670 -3 - 570 putative acetyltransferase - none -
fig|6666666.67501.peg.89 CDS gi|393401708|dbj|AP012284.1| 82557 82390 -3 - 168 hypothetical protein - none -
fig|6666666.67501.peg.90 CDS gi|393401708|dbj|AP012284.1| 83976 82639 -3 - 1338 FIG016551: Putative peptidase - none -
fig|6666666.67501.peg.91 CDS gi|393401708|dbj|AP012284.1| 84180 85175 3 + 996 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67501.peg.92 CDS gi|393401708|dbj|AP012284.1| 85181 85435 2 + 255 FIG00545382: hypothetical protein - none -
fig|6666666.67501.peg.93 CDS gi|393401708|dbj|AP012284.1| 85894 85463 -1 - 432 hypothetical protein - none -
fig|6666666.67501.peg.94 CDS gi|393401708|dbj|AP012284.1| 86028 87437 3 + 1410 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.67501.peg.95 CDS gi|393401708|dbj|AP012284.1| 87514 88938 1 + 1425 Putative lipoprotein - none -
fig|6666666.67501.peg.96 CDS gi|393401708|dbj|AP012284.1| 89201 89383 2 + 183 hypothetical protein - none -
fig|6666666.67501.peg.97 CDS gi|393401708|dbj|AP012284.1| 90090 89743 -3 - 348 hypothetical protein - none -
fig|6666666.67501.peg.98 CDS gi|393401708|dbj|AP012284.1| 90115 92958 1 + 2844 Neopullulanase (EC 3.2.1.135) / Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.99 CDS gi|393401708|dbj|AP012284.1| 93595 93347 -1 - 249 hypothetical protein - none -
fig|6666666.67501.peg.100 CDS gi|393401708|dbj|AP012284.1| 93611 94372 2 + 762 Putative hydrolase - none -
fig|6666666.67501.peg.101 CDS gi|393401708|dbj|AP012284.1| 95512 94427 -1 - 1086 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67501.peg.102 CDS gi|393401708|dbj|AP012284.1| 96501 95746 -3 - 756 hypothetical protein - none -
fig|6666666.67501.peg.103 CDS gi|393401708|dbj|AP012284.1| 97236 96673 -3 - 564 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.104 CDS gi|393401708|dbj|AP012284.1| 97288 98373 1 + 1086 hypothetical protein - none -
fig|6666666.67501.peg.105 CDS gi|393401708|dbj|AP012284.1| 99484 99251 -1 - 234 hypothetical protein - none -
fig|6666666.67501.peg.106 CDS gi|393401708|dbj|AP012284.1| 99923 100093 2 + 171 hypothetical protein - none -
fig|6666666.67501.peg.107 CDS gi|393401708|dbj|AP012284.1| 101574 100678 -3 - 897 hypothetical protein - none -
fig|6666666.67501.peg.108 CDS gi|393401708|dbj|AP012284.1| 101695 103560 1 + 1866 Sporulation protein and related proteins - none -
fig|6666666.67501.peg.109 CDS gi|393401708|dbj|AP012284.1| 103574 104719 2 + 1146 hypothetical protein - none -
fig|6666666.67501.peg.110 CDS gi|393401708|dbj|AP012284.1| 104973 105212 3 + 240 hypothetical protein - none -
fig|6666666.67501.peg.111 CDS gi|393401708|dbj|AP012284.1| 105673 105786 1 + 114 hypothetical protein - none -
fig|6666666.67501.peg.112 CDS gi|393401708|dbj|AP012284.1| 107811 107512 -3 - 300 hypothetical protein - none -
fig|6666666.67501.peg.113 CDS gi|393401708|dbj|AP012284.1| 109409 107808 -2 - 1602 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.67501.peg.114 CDS gi|393401708|dbj|AP012284.1| 110445 109414 -3 - 1032 FIG01029391: hypothetical protein - none -
fig|6666666.67501.peg.115 CDS gi|393401708|dbj|AP012284.1| 113131 110450 -1 - 2682 FIG01028573: hypothetical protein - none -
fig|6666666.67501.peg.116 CDS gi|393401708|dbj|AP012284.1| 114701 113124 -2 - 1578 hypothetical protein - none -
fig|6666666.67501.peg.117 CDS gi|393401708|dbj|AP012284.1| 115910 114705 -2 - 1206 FIG01029243: hypothetical protein - none -
fig|6666666.67501.peg.118 CDS gi|393401708|dbj|AP012284.1| 116596 116411 -1 - 186 hypothetical protein - none -
fig|6666666.67501.peg.119 CDS gi|393401708|dbj|AP012284.1| 117436 116630 -1 - 807 Putative lipase - none -
fig|6666666.67501.peg.120 CDS gi|393401708|dbj|AP012284.1| 117530 118117 2 + 588 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67501.peg.121 CDS gi|393401708|dbj|AP012284.1| 118199 118756 2 + 558 carbonic anhydrase, family 3 - none -
fig|6666666.67501.peg.122 CDS gi|393401708|dbj|AP012284.1| 119766 118759 -3 - 1008 FIG00545208: hypothetical protein - none -
fig|6666666.67501.peg.123 CDS gi|393401708|dbj|AP012284.1| 120429 121904 3 + 1476 hypothetical protein - none -
fig|6666666.67501.peg.124 CDS gi|393401708|dbj|AP012284.1| 122008 123078 1 + 1071 FIG00549925: hypothetical protein - none -
fig|6666666.67501.peg.125 CDS gi|393401708|dbj|AP012284.1| 123210 124856 3 + 1647 FIG00544558: hypothetical protein - none -
fig|6666666.67501.peg.126 CDS gi|393401708|dbj|AP012284.1| 124944 125360 3 + 417 Organic hydroperoxide resistance transcriptional regulator CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.67501.peg.127 CDS gi|393401708|dbj|AP012284.1| 125370 125723 3 + 354 hypothetical protein - none -
fig|6666666.67501.peg.128 CDS gi|393401708|dbj|AP012284.1| 125723 126580 2 + 858 hypothetical protein - none -
fig|6666666.67501.peg.129 CDS gi|393401708|dbj|AP012284.1| 127638 126577 -3 - 1062 FIG00545643: hypothetical protein - none -
fig|6666666.67501.peg.130 CDS gi|393401708|dbj|AP012284.1| 128332 127712 -1 - 621 hypothetical protein - none -
fig|6666666.67501.peg.131 CDS gi|393401708|dbj|AP012284.1| 128440 129216 1 + 777 FIG00545045: hypothetical protein - none -
fig|6666666.67501.peg.132 CDS gi|393401708|dbj|AP012284.1| 129392 130222 2 + 831 Putative phosphotransferase system protein - none -
fig|6666666.67501.peg.133 CDS gi|393401708|dbj|AP012284.1| 130234 131775 1 + 1542 Putative integral membrane protein - none -
fig|6666666.67501.peg.134 CDS gi|393401708|dbj|AP012284.1| 134237 131793 -2 - 2445 ATP-dependent helicase HrpB - none -
fig|6666666.67501.peg.135 CDS gi|393401708|dbj|AP012284.1| 134700 134251 -3 - 450 Galactoside O-acetyltransferase (EC 2.3.1.18) - none -
fig|6666666.67501.peg.136 CDS gi|393401708|dbj|AP012284.1| 135029 135652 2 + 624 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67501.peg.137 CDS gi|393401708|dbj|AP012284.1| 135727 136395 1 + 669 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67501.peg.138 CDS gi|393401708|dbj|AP012284.1| 136374 137075 3 + 702 putative short-chain dehydrogenase - none -
fig|6666666.67501.peg.139 CDS gi|393401708|dbj|AP012284.1| 137280 137161 -3 - 120 hypothetical protein - none -
fig|6666666.67501.peg.140 CDS gi|393401708|dbj|AP012284.1| 137474 137752 2 + 279 Threonine efflux protein - none -
fig|6666666.67501.peg.141 CDS gi|393401708|dbj|AP012284.1| 137804 138124 2 + 321 FIG00547592: hypothetical protein - none -
fig|6666666.67501.peg.142 CDS gi|393401708|dbj|AP012284.1| 138163 138453 1 + 291 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67501.peg.143 CDS gi|393401708|dbj|AP012284.1| 138453 139277 3 + 825 lactoylglutathione lyase-like protein - none -
fig|6666666.67501.peg.144 CDS gi|393401708|dbj|AP012284.1| 139624 140949 1 + 1326 hypothetical protein - none -
fig|6666666.67501.peg.145 CDS gi|393401708|dbj|AP012284.1| 142472 140946 -2 - 1527 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.146 CDS gi|393401708|dbj|AP012284.1| 143201 142482 -2 - 720 Glycerol uptake facilitator protein Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerol fermentation to 1,3-propanediol;
Osmoregulation
fig|6666666.67501.peg.147 CDS gi|393401708|dbj|AP012284.1| 144111 143272 -3 - 840 FIG00544069: hypothetical protein - none -
fig|6666666.67501.peg.148 CDS gi|393401708|dbj|AP012284.1| 145959 144124 -3 - 1836 putative endopeptidase - none -
fig|6666666.67501.peg.149 CDS gi|393401708|dbj|AP012284.1| 146000 146572 2 + 573 hypothetical protein - none -
fig|6666666.67501.peg.150 CDS gi|393401708|dbj|AP012284.1| 146569 147468 1 + 900 FIG00547725: hypothetical protein - none -
fig|6666666.67501.peg.151 CDS gi|393401708|dbj|AP012284.1| 147461 148333 2 + 873 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67501.peg.152 CDS gi|393401708|dbj|AP012284.1| 151620 148330 -3 - 3291 putative arabinosyltransferase - none -
fig|6666666.67501.peg.153 CDS gi|393401708|dbj|AP012284.1| 153688 151613 -1 - 2076 putative membrane protein - none -
fig|6666666.67501.peg.154 CDS gi|393401708|dbj|AP012284.1| 154603 153842 -1 - 762 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67501.peg.155 CDS gi|393401708|dbj|AP012284.1| 156091 154625 -1 - 1467 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67501.peg.156 CDS gi|393401708|dbj|AP012284.1| 155985 156098 3 + 114 hypothetical protein - none -
fig|6666666.67501.peg.157 CDS gi|393401708|dbj|AP012284.1| 156412 156185 -1 - 228 hypothetical protein - none -
fig|6666666.67501.peg.158 CDS gi|393401708|dbj|AP012284.1| 156456 156926 3 + 471 FIG00544111: hypothetical protein - none -
fig|6666666.67501.peg.159 CDS gi|393401708|dbj|AP012284.1| 156923 157444 2 + 522 FIG00547084: hypothetical protein - none -
fig|6666666.67501.peg.160 CDS gi|393401708|dbj|AP012284.1| 157486 158325 1 + 840 FIG00545361: hypothetical protein - none -
fig|6666666.67501.peg.161 CDS gi|393401708|dbj|AP012284.1| 158337 158789 3 + 453 FIG00544442: hypothetical protein - none -
fig|6666666.67501.peg.162 CDS gi|393401708|dbj|AP012284.1| 159692 158790 -2 - 903 Putative glycosyl transferase - none -
fig|6666666.67501.peg.163 CDS gi|393401708|dbj|AP012284.1| 159934 160905 1 + 972 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.67501.peg.164 CDS gi|393401708|dbj|AP012284.1| 160976 161701 2 + 726 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67501.peg.165 CDS gi|393401708|dbj|AP012284.1| 161698 162597 1 + 900 FIG00549834: hypothetical protein - none -
fig|6666666.67501.peg.166 CDS gi|393401708|dbj|AP012284.1| 162594 163469 3 + 876 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.67501.peg.167 CDS gi|393401708|dbj|AP012284.1| 163589 164590 2 + 1002 Putative membrane protein - none -
fig|6666666.67501.peg.168 CDS gi|393401708|dbj|AP012284.1| 164707 165429 1 + 723 hypothetical protein - none -
fig|6666666.67501.peg.169 CDS gi|393401708|dbj|AP012284.1| 166250 165453 -2 - 798 O-antigen export system, ATP-binding protein - none -
fig|6666666.67501.peg.170 CDS gi|393401708|dbj|AP012284.1| 167171 166266 -2 - 906 O-antigen export system permease protein RfbD - none -
fig|6666666.67501.peg.171 CDS gi|393401708|dbj|AP012284.1| 167324 168517 2 + 1194 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67501.peg.172 CDS gi|393401708|dbj|AP012284.1| 169473 168514 -3 - 960 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67501.peg.173 CDS gi|393401708|dbj|AP012284.1| 170724 169693 -3 - 1032 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67501.peg.174 CDS gi|393401708|dbj|AP012284.1| 171600 173174 3 + 1575 di- and tricarboxylate transporter - none -
fig|6666666.67501.peg.175 CDS gi|393401708|dbj|AP012284.1| 173420 173298 -2 - 123 hypothetical protein - none -
fig|6666666.67501.peg.176 CDS gi|393401708|dbj|AP012284.1| 173499 174332 3 + 834 Beta-glucoside bgl operon antiterminator, BglG family - none -
fig|6666666.67501.peg.177 CDS gi|393401708|dbj|AP012284.1| 174364 175947 1 + 1584 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.67501.peg.178 CDS gi|393401708|dbj|AP012284.1| 175947 176420 3 + 474 COG1263: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.67501.peg.179 CDS gi|393401708|dbj|AP012284.1| 176580 177383 3 + 804 Putative hydroxylase - none -
fig|6666666.67501.peg.180 CDS gi|393401708|dbj|AP012284.1| 178940 177714 -2 - 1227 Putative phage integrase - none -
fig|6666666.67501.peg.181 CDS gi|393401708|dbj|AP012284.1| 180053 179058 -2 - 996 Transcriptional regulator - none -
fig|6666666.67501.peg.182 CDS gi|393401708|dbj|AP012284.1| 180711 180091 -3 - 621 hypothetical protein - none -
fig|6666666.67501.peg.183 CDS gi|393401708|dbj|AP012284.1| 181507 180896 -1 - 612 hypothetical protein - none -
fig|6666666.67501.peg.184 CDS gi|393401708|dbj|AP012284.1| 181917 181516 -3 - 402 hypothetical protein - none -
fig|6666666.67501.peg.185 CDS gi|393401708|dbj|AP012284.1| 182364 181930 -3 - 435 hypothetical protein - none -
fig|6666666.67501.peg.186 CDS gi|393401708|dbj|AP012284.1| 182499 182681 3 + 183 hypothetical protein - none -
fig|6666666.67501.peg.187 CDS gi|393401708|dbj|AP012284.1| 182713 182928 1 + 216 hypothetical protein - none -
fig|6666666.67501.peg.188 CDS gi|393401708|dbj|AP012284.1| 183001 183186 1 + 186 hypothetical protein - none -
fig|6666666.67501.peg.189 CDS gi|393401708|dbj|AP012284.1| 183199 183426 1 + 228 hypothetical protein - none -
fig|6666666.67501.peg.190 CDS gi|393401708|dbj|AP012284.1| 183444 184226 3 + 783 Phage antirepressor protein - none -
fig|6666666.67501.peg.191 CDS gi|393401708|dbj|AP012284.1| 184223 184441 2 + 219 hypothetical protein - none -
fig|6666666.67501.peg.192 CDS gi|393401708|dbj|AP012284.1| 184454 184606 2 + 153 hypothetical protein - none -
fig|6666666.67501.peg.193 CDS gi|393401708|dbj|AP012284.1| 184603 185343 1 + 741 No significant database matches - none -
fig|6666666.67501.peg.194 CDS gi|393401708|dbj|AP012284.1| 185684 185406 -2 - 279 hypothetical protein - none -
fig|6666666.67501.peg.195 CDS gi|393401708|dbj|AP012284.1| 185778 186944 3 + 1167 hypothetical protein - none -
fig|6666666.67501.peg.196 CDS gi|393401708|dbj|AP012284.1| 186937 187485 1 + 549 hypothetical protein - none -
fig|6666666.67501.peg.197 CDS gi|393401708|dbj|AP012284.1| 187666 187827 1 + 162 hypothetical protein - none -
fig|6666666.67501.peg.198 CDS gi|393401708|dbj|AP012284.1| 188110 188583 1 + 474 hypothetical protein - none -
fig|6666666.67501.peg.199 CDS gi|393401708|dbj|AP012284.1| 188567 189643 2 + 1077 Phage terminase, large subunit Phage packaging machinery
fig|6666666.67501.peg.200 CDS gi|393401708|dbj|AP012284.1| 189612 190223 3 + 612 Phage terminase, large subunit # Pham2 Phage packaging machinery
fig|6666666.67501.peg.201 CDS gi|393401708|dbj|AP012284.1| 190223 191548 2 + 1326 Phage portal protein # Pham3 Phage packaging machinery
fig|6666666.67501.peg.202 CDS gi|393401708|dbj|AP012284.1| 191685 193277 3 + 1593 hypothetical protein - none -
fig|6666666.67501.peg.203 CDS gi|393401708|dbj|AP012284.1| 193274 193576 2 + 303 hypothetical protein - none -
fig|6666666.67501.peg.204 CDS gi|393401708|dbj|AP012284.1| 193653 194270 3 + 618 hypothetical protein - none -
fig|6666666.67501.peg.205 CDS gi|393401708|dbj|AP012284.1| 194282 195271 2 + 990 hypothetical protein - none -
fig|6666666.67501.peg.206 CDS gi|393401708|dbj|AP012284.1| 195283 195582 1 + 300 hypothetical protein - none -
fig|6666666.67501.peg.207 CDS gi|393401708|dbj|AP012284.1| 195595 196005 1 + 411 hypothetical protein - none -
fig|6666666.67501.peg.208 CDS gi|393401708|dbj|AP012284.1| 195999 196370 3 + 372 hypothetical protein - none -
fig|6666666.67501.peg.209 CDS gi|393401708|dbj|AP012284.1| 196367 196681 2 + 315 hypothetical protein - none -
fig|6666666.67501.peg.210 CDS gi|393401708|dbj|AP012284.1| 196678 197133 1 + 456 hypothetical protein - none -
fig|6666666.67501.peg.211 CDS gi|393401708|dbj|AP012284.1| 197143 197985 1 + 843 Putative phage protein - none -
fig|6666666.67501.peg.212 CDS gi|393401708|dbj|AP012284.1| 198081 198434 3 + 354 hypothetical protein - none -
fig|6666666.67501.peg.213 CDS gi|393401708|dbj|AP012284.1| 198542 198877 2 + 336 hypothetical protein - none -
fig|6666666.67501.peg.214 CDS gi|393401708|dbj|AP012284.1| 198894 205148 3 + 6255 putative tape-measure protein - none -
fig|6666666.67501.peg.215 CDS gi|393401708|dbj|AP012284.1| 205166 205948 2 + 783 immunity-specific protein Beta201 - none -
fig|6666666.67501.peg.216 CDS gi|393401708|dbj|AP012284.1| 205948 206844 1 + 897 immunity-specific protein Beta286 - none -
fig|6666666.67501.peg.217 CDS gi|393401708|dbj|AP012284.1| 206837 207943 2 + 1107 immunity-specific protein Beta371 - none -
fig|6666666.67501.peg.218 CDS gi|393401708|dbj|AP012284.1| 208056 209480 3 + 1425 hypothetical protein - none -
fig|6666666.67501.peg.219 CDS gi|393401708|dbj|AP012284.1| 209590 210411 1 + 822 Teichoic acid phosphorylcholine esterase/choline binding protein E (cbpE) - none -
fig|6666666.67501.peg.220 CDS gi|393401708|dbj|AP012284.1| 210404 210643 2 + 240 hypothetical protein - none -
fig|6666666.67501.peg.221 CDS gi|393401708|dbj|AP012284.1| 210649 211113 1 + 465 Putative membrane protein - none -
fig|6666666.67501.peg.222 CDS gi|393401708|dbj|AP012284.1| 211116 211448 3 + 333 Putative secreted protein - none -
fig|6666666.67501.peg.223 CDS gi|393401708|dbj|AP012284.1| 211802 213484 2 + 1683 Diphtheria toxin (NAD(+)--diphthamide ADP- ribosyltransferase) (EC 2.4.2.36) - none -
fig|6666666.67501.peg.224 CDS gi|393401708|dbj|AP012284.1| 213727 213936 1 + 210 hypothetical protein - none -
fig|6666666.67501.peg.225 CDS gi|393401708|dbj|AP012284.1| 214653 213967 -3 - 687 hypothetical protein - none -
fig|6666666.67501.peg.226 CDS gi|393401708|dbj|AP012284.1| 216231 214846 -3 - 1386 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67501.peg.227 CDS gi|393401708|dbj|AP012284.1| 216321 217217 3 + 897 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67501.peg.228 CDS gi|393401708|dbj|AP012284.1| 217211 217777 2 + 567 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67501.peg.229 CDS gi|393401708|dbj|AP012284.1| 217924 218784 1 + 861 hypothetical protein - none -
fig|6666666.67501.peg.230 CDS gi|393401708|dbj|AP012284.1| 219916 218903 -1 - 1014 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67501.peg.231 CDS gi|393401708|dbj|AP012284.1| 219954 220406 3 + 453 FIG00544249: hypothetical protein - none -
fig|6666666.67501.peg.232 CDS gi|393401708|dbj|AP012284.1| 220424 220879 2 + 456 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67501.peg.233 CDS gi|393401708|dbj|AP012284.1| 221294 223681 2 + 2388 putative membrane protein - none -
fig|6666666.67501.peg.234 CDS gi|393401708|dbj|AP012284.1| 223730 224971 2 + 1242 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67501.peg.235 CDS gi|393401708|dbj|AP012284.1| 224958 225824 3 + 867 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67501.peg.236 CDS gi|393401708|dbj|AP012284.1| 226058 227446 2 + 1389 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.67501.peg.237 CDS gi|393401708|dbj|AP012284.1| 227906 227430 -2 - 477 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67501.peg.238 CDS gi|393401708|dbj|AP012284.1| 228907 227918 -1 - 990 L-idonate 5-dehydrogenase (EC 1.1.1.264) D-gluconate and ketogluconates metabolism
fig|6666666.67501.peg.239 CDS gi|393401708|dbj|AP012284.1| 229734 228910 -3 - 825 5-keto-D-gluconate 5-reductase (EC 1.1.1.69) D-gluconate and ketogluconates metabolism
fig|6666666.67501.peg.240 CDS gi|393401708|dbj|AP012284.1| 230489 231766 2 + 1278 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67501.peg.241 CDS gi|393401708|dbj|AP012284.1| 231911 231777 -2 - 135 hypothetical protein - none -
fig|6666666.67501.peg.242 CDS gi|393401708|dbj|AP012284.1| 231870 232418 3 + 549 FIG00544659: hypothetical protein - none -
fig|6666666.67501.peg.243 CDS gi|393401708|dbj|AP012284.1| 232432 235122 1 + 2691 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67501.peg.244 CDS gi|393401708|dbj|AP012284.1| 235226 235546 2 + 321 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67501.peg.245 CDS gi|393401708|dbj|AP012284.1| 235660 236316 1 + 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67501.peg.246 CDS gi|393401708|dbj|AP012284.1| 237661 236324 -1 - 1338 Gluconate permease D-gluconate and ketogluconates metabolism
fig|6666666.67501.peg.247 CDS gi|393401708|dbj|AP012284.1| 238569 237661 -3 - 909 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) - none -
fig|6666666.67501.peg.248 CDS gi|393401708|dbj|AP012284.1| 240026 238599 -2 - 1428 FIG00549167: hypothetical protein - none -
fig|6666666.67501.peg.249 CDS gi|393401708|dbj|AP012284.1| 240888 240169 -3 - 720 transcriptional regulator, GntR family - none -
fig|6666666.67501.peg.250 CDS gi|393401708|dbj|AP012284.1| 240985 241830 1 + 846 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67501.peg.251 CDS gi|393401708|dbj|AP012284.1| 241911 242945 3 + 1035 Putative secreted protein - none -
fig|6666666.67501.peg.252 CDS gi|393401708|dbj|AP012284.1| 243140 243012 -2 - 129 hypothetical protein - none -
fig|6666666.67501.peg.253 CDS gi|393401708|dbj|AP012284.1| 244374 243622 -3 - 753 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67501.peg.254 CDS gi|393401708|dbj|AP012284.1| 245648 244374 -2 - 1275 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67501.peg.255 CDS gi|393401708|dbj|AP012284.1| 246706 245660 -1 - 1047 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.67501.peg.256 CDS gi|393401708|dbj|AP012284.1| 247180 248172 1 + 993 Exonuclease sbcC (EC 3.1.11.-) - none -
fig|6666666.67501.peg.257 CDS gi|393401708|dbj|AP012284.1| 248988 248245 -3 - 744 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.67501.peg.258 CDS gi|393401708|dbj|AP012284.1| 250894 249077 -1 - 1818 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67501.peg.259 CDS gi|393401708|dbj|AP012284.1| 251123 252061 2 + 939 Deoxyribonucleoside regulator DeoR (transcriptional repressor) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67501.peg.260 CDS gi|393401708|dbj|AP012284.1| 252309 253025 3 + 717 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.67501.peg.261 CDS gi|393401708|dbj|AP012284.1| 253038 254414 3 + 1377 Similar to tetracycline resistance protein - none -
fig|6666666.67501.peg.262 CDS gi|393401708|dbj|AP012284.1| 254473 255138 1 + 666 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67501.peg.263 CDS gi|393401708|dbj|AP012284.1| 255171 256823 3 + 1653 Putative mutase - none -
fig|6666666.67501.peg.264 CDS gi|393401708|dbj|AP012284.1| 257403 259046 3 + 1644 hypothetical protein - none -
fig|6666666.67501.peg.265 CDS gi|393401708|dbj|AP012284.1| 259674 263015 3 + 3342 Protein of unknown function DUF11 - none -
fig|6666666.67501.peg.266 CDS gi|393401708|dbj|AP012284.1| 263125 263012 -1 - 114 hypothetical protein - none -
fig|6666666.67501.peg.267 CDS gi|393401708|dbj|AP012284.1| 263165 264361 2 + 1197 FIG00546120: hypothetical protein - none -
fig|6666666.67501.peg.268 CDS gi|393401708|dbj|AP012284.1| 265227 264382 -3 - 846 FIG00544278: hypothetical protein - none -
fig|6666666.67501.peg.269 CDS gi|393401708|dbj|AP012284.1| 265329 266336 3 + 1008 putative ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.270 CDS gi|393401708|dbj|AP012284.1| 266333 267937 2 + 1605 ABC transporter membrane-spanning protein - none -
fig|6666666.67501.peg.271 CDS gi|393401708|dbj|AP012284.1| 268180 269445 1 + 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67501.peg.272 CDS gi|393401708|dbj|AP012284.1| 269801 273004 2 + 3204 FIG00549254: hypothetical protein - none -
fig|6666666.67501.peg.273 CDS gi|393401708|dbj|AP012284.1| 273308 274339 2 + 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67501.peg.274 CDS gi|393401708|dbj|AP012284.1| 274969 274406 -1 - 564 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.67501.peg.275 CDS gi|393401708|dbj|AP012284.1| 275117 276655 2 + 1539 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67501.peg.276 CDS gi|393401708|dbj|AP012284.1| 276776 276627 -2 - 150 hypothetical protein - none -
fig|6666666.67501.peg.277 CDS gi|393401708|dbj|AP012284.1| 277159 278358 1 + 1200 POSSIBLE CONSERVED TRANSMEMBRANE ALANINE AND GLYCINE RICH PROTEIN - none -
fig|6666666.67501.peg.278 CDS gi|393401708|dbj|AP012284.1| 278334 279245 3 + 912 Putative exported protein - none -
fig|6666666.67501.peg.279 CDS gi|393401708|dbj|AP012284.1| 279248 281431 2 + 2184 hypothetical protein - none -
fig|6666666.67501.peg.280 CDS gi|393401708|dbj|AP012284.1| 281507 283165 2 + 1659 hypothetical protein - none -
fig|6666666.67501.peg.281 CDS gi|393401708|dbj|AP012284.1| 283183 283551 1 + 369 hypothetical protein - none -
fig|6666666.67501.peg.282 CDS gi|393401708|dbj|AP012284.1| 283586 283867 2 + 282 hypothetical protein - none -
fig|6666666.67501.peg.283 CDS gi|393401708|dbj|AP012284.1| 283867 284808 1 + 942 hypothetical protein - none -
fig|6666666.67501.peg.284 CDS gi|393401708|dbj|AP012284.1| 284823 285446 3 + 624 hypothetical protein - none -
fig|6666666.67501.peg.285 CDS gi|393401708|dbj|AP012284.1| 285446 286390 2 + 945 hypothetical protein - none -
fig|6666666.67501.peg.286 CDS gi|393401708|dbj|AP012284.1| 287496 286444 -3 - 1053 FIG00547503: hypothetical protein - none -
fig|6666666.67501.peg.287 CDS gi|393401708|dbj|AP012284.1| 289040 287487 -2 - 1554 Putative transport system permease (iron) - none -
fig|6666666.67501.peg.288 CDS gi|393401708|dbj|AP012284.1| 290038 289037 -1 - 1002 iron ABC transporter substrate-binding protein - none -
fig|6666666.67501.peg.289 CDS gi|393401708|dbj|AP012284.1| 291487 290117 -1 - 1371 Glycerol-3-phosphate transporter Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67501.peg.290 CDS gi|393401708|dbj|AP012284.1| 292318 291617 -1 - 702 two-component regulatory protein - none -
fig|6666666.67501.peg.291 CDS gi|393401708|dbj|AP012284.1| 293096 292311 -2 - 786 two-component sensor protein - none -
fig|6666666.67501.peg.292 CDS gi|393401708|dbj|AP012284.1| 293526 293218 -3 - 309 hypothetical protein - none -
fig|6666666.67501.peg.293 CDS gi|393401708|dbj|AP012284.1| 293792 293526 -2 - 267 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67501.peg.294 CDS gi|393401708|dbj|AP012284.1| 294211 293792 -1 - 420 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67501.peg.295 CDS gi|393401708|dbj|AP012284.1| 295749 294211 -3 - 1539 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67501.peg.296 CDS gi|393401708|dbj|AP012284.1| 296207 295749 -2 - 459 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67501.peg.297 CDS gi|393401708|dbj|AP012284.1| 299198 296208 -2 - 2991 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67501.peg.298 CDS gi|393401708|dbj|AP012284.1| 299383 300816 1 + 1434 FIG00544507: hypothetical protein - none -
fig|6666666.67501.peg.299 CDS gi|393401708|dbj|AP012284.1| 302003 300813 -2 - 1191 Putative secreted protein - none -
fig|6666666.67501.peg.300 CDS gi|393401708|dbj|AP012284.1| 303540 302713 -3 - 828 possible ABC transporter, permease component - none -
fig|6666666.67501.peg.301 CDS gi|393401708|dbj|AP012284.1| 304458 303544 -3 - 915 putative ABC transport system, ATP-binding protein - none -
fig|6666666.67501.peg.302 CDS gi|393401708|dbj|AP012284.1| 305913 305008 -3 - 906 putative secreted protein - none -
fig|6666666.67501.peg.303 CDS gi|393401708|dbj|AP012284.1| 305948 306409 2 + 462 Transamidase GatB domain protein - none -
fig|6666666.67501.peg.304 CDS gi|393401708|dbj|AP012284.1| 308801 306429 -2 - 2373 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67501.peg.305 CDS gi|393401708|dbj|AP012284.1| 308996 309343 2 + 348 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67501.peg.306 CDS gi|393401708|dbj|AP012284.1| 309507 309662 3 + 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67501.peg.307 CDS gi|393401708|dbj|AP012284.1| 309662 310120 2 + 459 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67501.peg.308 CDS gi|393401708|dbj|AP012284.1| 310329 311036 3 + 708 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67501.peg.309 CDS gi|393401708|dbj|AP012284.1| 311829 311146 -3 - 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67501.peg.310 CDS gi|393401708|dbj|AP012284.1| 312346 312131 -1 - 216 hypothetical protein - none -
fig|6666666.67501.peg.311 CDS gi|393401708|dbj|AP012284.1| 312427 313233 1 + 807 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67501.peg.312 CDS gi|393401708|dbj|AP012284.1| 313236 313838 3 + 603 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.67501.peg.313 CDS gi|393401708|dbj|AP012284.1| 313838 314617 2 + 780 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67501.peg.314 CDS gi|393401708|dbj|AP012284.1| 314699 315895 2 + 1197 putative serine protease - none -
fig|6666666.67501.peg.315 CDS gi|393401708|dbj|AP012284.1| 316806 315892 -3 - 915 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.67501.peg.316 CDS gi|393401708|dbj|AP012284.1| 317397 316897 -3 - 501 FIG00820727: hypothetical protein - none -
fig|6666666.67501.peg.317 CDS gi|393401708|dbj|AP012284.1| 317514 318179 3 + 666 probable oxidoreductase - none -
fig|6666666.67501.peg.318 CDS gi|393401708|dbj|AP012284.1| 319095 318223 -3 - 873 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67501.peg.319 CDS gi|393401708|dbj|AP012284.1| 319748 320161 2 + 414 hypothetical protein - none -
fig|6666666.67501.peg.320 CDS gi|393401708|dbj|AP012284.1| 320607 321638 3 + 1032 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-336982.3.peg.3874;
Septum site-determining cluster Min
fig|6666666.67501.peg.321 CDS gi|393401708|dbj|AP012284.1| 321635 322759 2 + 1125 Flp pilus assembly protein, ATPase CpaF CBSS-336982.3.peg.3874
fig|6666666.67501.peg.322 CDS gi|393401708|dbj|AP012284.1| 323113 323514 1 + 402 FIG016317: Probable conserved transmembrane protein CBSS-336982.3.peg.3874
fig|6666666.67501.peg.323 CDS gi|393401708|dbj|AP012284.1| 323511 324134 3 + 624 FIG054221: Possible conserved alanine rich membrane protein CBSS-336982.3.peg.3874
fig|6666666.67501.peg.324 CDS gi|393401708|dbj|AP012284.1| 324210 324404 3 + 195 hypothetical protein - none -
fig|6666666.67501.peg.325 CDS gi|393401708|dbj|AP012284.1| 324414 324686 3 + 273 Putative secreted protein - none -
fig|6666666.67501.peg.326 CDS gi|393401708|dbj|AP012284.1| 324683 325015 2 + 333 Putative secreted protein - none -
fig|6666666.67501.peg.327 CDS gi|393401708|dbj|AP012284.1| 327422 325065 -2 - 2358 ATP-dependent helicase - none -
fig|6666666.67501.peg.328 CDS gi|393401708|dbj|AP012284.1| 327672 327875 3 + 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67501.peg.329 CDS gi|393401708|dbj|AP012284.1| 328118 331063 2 + 2946 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67501.peg.330 CDS gi|393401708|dbj|AP012284.1| 333256 331283 -1 - 1974 oligopeptide transporter - none -
fig|6666666.67501.peg.331 CDS gi|393401708|dbj|AP012284.1| 334994 333468 -2 - 1527 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67501.peg.332 CDS gi|393401708|dbj|AP012284.1| 335039 336244 2 + 1206 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67501.peg.333 CDS gi|393401708|dbj|AP012284.1| 336872 336702 -2 - 171 hypothetical protein - none -
fig|6666666.67501.peg.334 CDS gi|393401708|dbj|AP012284.1| 336937 337068 1 + 132 hypothetical protein - none -
fig|6666666.67501.peg.335 CDS gi|393401708|dbj|AP012284.1| 338721 337075 -3 - 1647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67501.peg.336 CDS gi|393401708|dbj|AP012284.1| 338932 339741 1 + 810 Putative secreted hydrolase - none -
fig|6666666.67501.peg.337 CDS gi|393401708|dbj|AP012284.1| 340737 339868 -3 - 870 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67501.peg.338 CDS gi|393401708|dbj|AP012284.1| 342114 340741 -3 - 1374 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.67501.peg.339 CDS gi|393401708|dbj|AP012284.1| 343155 342151 -3 - 1005 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67501.peg.340 CDS gi|393401708|dbj|AP012284.1| 344552 343179 -2 - 1374 aminopeptidase N - none -
fig|6666666.67501.peg.341 CDS gi|393401708|dbj|AP012284.1| 346626 344545 -3 - 2082 Putative prolyl oligopeptidase family protein - none -
fig|6666666.67501.peg.342 CDS gi|393401708|dbj|AP012284.1| 347791 346712 -1 - 1080 FIG00544202: hypothetical protein - none -
fig|6666666.67501.peg.343 CDS gi|393401708|dbj|AP012284.1| 348193 348327 1 + 135 hypothetical protein - none -
fig|6666666.67501.peg.344 CDS gi|393401708|dbj|AP012284.1| 348610 350019 1 + 1410 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Glycine cleavage system;
TCA Cycle
fig|6666666.67501.peg.345 CDS gi|393401708|dbj|AP012284.1| 351519 350092 -3 - 1428 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.67501.peg.346 CDS gi|393401708|dbj|AP012284.1| 351994 352752 1 + 759 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67501.peg.347 CDS gi|393401708|dbj|AP012284.1| 352772 354787 2 + 2016 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.67501.peg.348 CDS gi|393401708|dbj|AP012284.1| 354787 355536 1 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.67501.peg.349 CDS gi|393401708|dbj|AP012284.1| 355597 355947 1 + 351 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.67501.peg.350 CDS gi|393401708|dbj|AP012284.1| 356008 356133 1 + 126 hypothetical protein - none -
fig|6666666.67501.peg.351 CDS gi|393401708|dbj|AP012284.1| 356288 357595 2 + 1308 FIG00544632: hypothetical protein - none -
fig|6666666.67501.peg.352 CDS gi|393401708|dbj|AP012284.1| 357658 357948 1 + 291 FIG00544701: hypothetical protein - none -
fig|6666666.67501.peg.353 CDS gi|393401708|dbj|AP012284.1| 357955 358530 1 + 576 hypothetical protein - none -
fig|6666666.67501.peg.354 CDS gi|393401708|dbj|AP012284.1| 359375 358527 -2 - 849 FIG00546356: hypothetical protein - none -
fig|6666666.67501.peg.355 CDS gi|393401708|dbj|AP012284.1| 359384 359509 2 + 126 hypothetical protein - none -
fig|6666666.67501.peg.356 CDS gi|393401708|dbj|AP012284.1| 360335 359466 -2 - 870 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.67501.peg.357 CDS gi|393401708|dbj|AP012284.1| 360767 360516 -2 - 252 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.67501.peg.358 CDS gi|393401708|dbj|AP012284.1| 362888 360819 -2 - 2070 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.67501.peg.359 CDS gi|393401708|dbj|AP012284.1| 364169 363465 -2 - 705 Methylase of polypeptide chain release factors - none -
fig|6666666.67501.peg.360 CDS gi|393401708|dbj|AP012284.1| 364819 364316 -1 - 504 FIG00546961: hypothetical protein - none -
fig|6666666.67501.peg.361 CDS gi|393401708|dbj|AP012284.1| 364843 365982 1 + 1140 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67501.peg.362 CDS gi|393401708|dbj|AP012284.1| 367810 366104 -1 - 1707 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67501.peg.363 CDS gi|393401708|dbj|AP012284.1| 368117 369379 2 + 1263 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67501.peg.364 CDS gi|393401708|dbj|AP012284.1| 369503 370249 2 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67501.peg.365 CDS gi|393401708|dbj|AP012284.1| 370405 371508 1 + 1104 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67501.peg.366 CDS gi|393401708|dbj|AP012284.1| 371509 372204 1 + 696 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67501.peg.367 CDS gi|393401708|dbj|AP012284.1| 373136 372201 -2 - 936 FIG01122970: hypothetical protein - none -
fig|6666666.67501.peg.368 CDS gi|393401708|dbj|AP012284.1| 373190 374134 2 + 945 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67501.peg.369 CDS gi|393401708|dbj|AP012284.1| 374131 375213 1 + 1083 conserved hypothetical 3 TMS, ~360aa Corynebacterium protein - none -
fig|6666666.67501.peg.370 CDS gi|393401708|dbj|AP012284.1| 375241 376113 1 + 873 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67501.peg.371 CDS gi|393401708|dbj|AP012284.1| 376138 376287 1 + 150 hypothetical protein - none -
fig|6666666.67501.peg.372 CDS gi|393401708|dbj|AP012284.1| 376402 376593 1 + 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67501.peg.373 CDS gi|393401708|dbj|AP012284.1| 376831 377007 1 + 177 conserved hypothetical 1 TMS, 30-80aa Actinobacteria protein - none -
fig|6666666.67501.peg.374 CDS gi|393401708|dbj|AP012284.1| 377090 377974 2 + 885 Putative secreted protein - none -
fig|6666666.67501.peg.375 CDS gi|393401708|dbj|AP012284.1| 377946 378791 3 + 846 cytochrome c biogenesis protein, transmembrane region - none -
fig|6666666.67501.peg.376 CDS gi|393401708|dbj|AP012284.1| 379831 378788 -1 - 1044 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67501.peg.377 CDS gi|393401708|dbj|AP012284.1| 380017 380181 1 + 165 Glutaredoxin-like domain protein - none -
fig|6666666.67501.peg.378 CDS gi|393401708|dbj|AP012284.1| 380224 380349 1 + 126 hypothetical protein - none -
fig|6666666.67501.peg.379 CDS gi|393401708|dbj|AP012284.1| 380412 381710 3 + 1299 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.380 CDS gi|393401708|dbj|AP012284.1| 381713 382603 2 + 891 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.381 CDS gi|393401708|dbj|AP012284.1| 382860 384548 3 + 1689 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.382 CDS gi|393401708|dbj|AP012284.1| 384596 385603 2 + 1008 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis;
Zinc regulated enzymes
fig|6666666.67501.peg.383 CDS gi|393401708|dbj|AP012284.1| 385611 386192 3 + 582 3/4-TMS conserved FUPA26-associated hypothetical protein - none -
fig|6666666.67501.peg.384 CDS gi|393401708|dbj|AP012284.1| 386179 388818 1 + 2640 FUPA26 P-type ATPase - none -
fig|6666666.67501.peg.385 CDS gi|393401708|dbj|AP012284.1| 388934 389998 2 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.386 CDS gi|393401708|dbj|AP012284.1| 390063 391448 3 + 1386 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.387 CDS gi|393401708|dbj|AP012284.1| 392261 391455 -2 - 807 putative dehydrogenase - none -
fig|6666666.67501.peg.388 CDS gi|393401708|dbj|AP012284.1| 392388 393704 3 + 1317 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.389 CDS gi|393401708|dbj|AP012284.1| 393713 394321 2 + 609 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.67501.peg.390 CDS gi|393401708|dbj|AP012284.1| 394324 394908 1 + 585 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67501.peg.391 CDS gi|393401708|dbj|AP012284.1| 394905 395711 3 + 807 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67501.peg.392 CDS gi|393401708|dbj|AP012284.1| 395788 397332 1 + 1545 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67501.peg.393 CDS gi|393401708|dbj|AP012284.1| 398097 397339 -3 - 759 Methyltransferase - none -
fig|6666666.67501.peg.394 CDS gi|393401708|dbj|AP012284.1| 398261 399265 2 + 1005 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67501.peg.395 CDS gi|393401708|dbj|AP012284.1| 399643 399326 -1 - 318 Putative ArsR family regulatory protein - none -
fig|6666666.67501.peg.396 CDS gi|393401708|dbj|AP012284.1| 400007 399717 -2 - 291 hypothetical protein - none -
fig|6666666.67501.peg.397 CDS gi|393401708|dbj|AP012284.1| 400100 400426 2 + 327 FIG00544880: hypothetical protein - none -
fig|6666666.67501.peg.398 CDS gi|393401708|dbj|AP012284.1| 401287 400412 -1 - 876 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67501.peg.399 CDS gi|393401708|dbj|AP012284.1| 402278 401301 -2 - 978 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67501.peg.400 CDS gi|393401708|dbj|AP012284.1| 403556 402489 -2 - 1068 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67501.peg.401 CDS gi|393401708|dbj|AP012284.1| 404177 403716 -2 - 462 FIG00546851: hypothetical protein - none -
fig|6666666.67501.peg.402 CDS gi|393401708|dbj|AP012284.1| 405665 404244 -2 - 1422 Putative transport protein - none -
fig|6666666.67501.peg.403 CDS gi|393401708|dbj|AP012284.1| 405899 406936 2 + 1038 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67501.peg.404 CDS gi|393401708|dbj|AP012284.1| 407003 408613 2 + 1611 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67501.peg.405 CDS gi|393401708|dbj|AP012284.1| 408709 409065 1 + 357 FIG00543979: hypothetical protein - none -
fig|6666666.67501.peg.406 CDS gi|393401708|dbj|AP012284.1| 409043 410161 2 + 1119 Glycosyltransferase - none -
fig|6666666.67501.peg.407 CDS gi|393401708|dbj|AP012284.1| 410154 410852 3 + 699 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67501.peg.408 CDS gi|393401708|dbj|AP012284.1| 411891 410929 -3 - 963 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.67501.peg.409 CDS gi|393401708|dbj|AP012284.1| 413267 411987 -2 - 1281 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67501.peg.410 CDS gi|393401708|dbj|AP012284.1| 413419 414438 1 + 1020 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.67501.peg.411 CDS gi|393401708|dbj|AP012284.1| 415689 415561 -3 - 129 hypothetical protein - none -
fig|6666666.67501.peg.412 CDS gi|393401708|dbj|AP012284.1| 415653 415979 3 + 327 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67501.peg.413 CDS gi|393401708|dbj|AP012284.1| 416097 416927 3 + 831 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67501.peg.414 CDS gi|393401708|dbj|AP012284.1| 417223 417654 1 + 432 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67501.peg.415 CDS gi|393401708|dbj|AP012284.1| 417733 418440 1 + 708 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67501.peg.416 CDS gi|393401708|dbj|AP012284.1| 418550 419887 2 + 1338 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.67501.peg.417 CDS gi|393401708|dbj|AP012284.1| 419927 421228 2 + 1302 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.67501.peg.418 CDS gi|393401708|dbj|AP012284.1| 421336 422409 1 + 1074 NADPH dehydrogenase - none -
fig|6666666.67501.peg.419 CDS gi|393401708|dbj|AP012284.1| 422733 423248 3 + 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67501.peg.420 CDS gi|393401708|dbj|AP012284.1| 423327 423710 3 + 384 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67501.peg.421 CDS gi|393401708|dbj|AP012284.1| 424036 424989 1 + 954 FIG00548024: hypothetical protein - none -
fig|6666666.67501.peg.422 CDS gi|393401708|dbj|AP012284.1| 425053 426624 1 + 1572 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67501.peg.423 CDS gi|393401708|dbj|AP012284.1| 426755 427774 2 + 1020 FIG00814575: hypothetical protein - none -
fig|6666666.67501.peg.424 CDS gi|393401708|dbj|AP012284.1| 427771 428571 1 + 801 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67501.peg.425 CDS gi|393401708|dbj|AP012284.1| 428568 429449 3 + 882 ABC transporter component, possibly Mn transport - none -
fig|6666666.67501.peg.426 CDS gi|393401708|dbj|AP012284.1| 429446 431464 2 + 2019 hypothetical protein - none -
fig|6666666.67501.peg.427 CDS gi|393401708|dbj|AP012284.1| 431569 432510 1 + 942 FIG00545886: hypothetical protein - none -
fig|6666666.67501.peg.428 CDS gi|393401708|dbj|AP012284.1| 432701 436237 2 + 3537 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67501.peg.429 CDS gi|393401708|dbj|AP012284.1| 436343 440353 2 + 4011 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67501.peg.430 CDS gi|393401708|dbj|AP012284.1| 440510 440857 2 + 348 No significant database matches - none -
fig|6666666.67501.peg.431 CDS gi|393401708|dbj|AP012284.1| 441296 442729 2 + 1434 hypothetical protein - none -
fig|6666666.67501.peg.432 CDS gi|393401708|dbj|AP012284.1| 442905 444173 3 + 1269 Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.433 CDS gi|393401708|dbj|AP012284.1| 444188 444892 2 + 705 Hemoglobin, heme-dependent two component system response regulator ChrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.434 CDS gi|393401708|dbj|AP012284.1| 446256 444913 -3 - 1344 FIG00818256: hypothetical protein - none -
fig|6666666.67501.peg.435 CDS gi|393401708|dbj|AP012284.1| 446463 447506 3 + 1044 FIG00818733: hypothetical protein - none -
fig|6666666.67501.peg.436 CDS gi|393401708|dbj|AP012284.1| 448651 447581 -1 - 1071 FIG00818786: hypothetical protein - none -
fig|6666666.67501.peg.437 CDS gi|393401708|dbj|AP012284.1| 448935 449915 3 + 981 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67501.peg.438 CDS gi|393401708|dbj|AP012284.1| 449954 450715 2 + 762 Putative ABc transport system integral membrane protein - none -
fig|6666666.67501.peg.439 CDS gi|393401708|dbj|AP012284.1| 450818 451543 2 + 726 hypothetical protein - none -
fig|6666666.67501.peg.440 CDS gi|393401708|dbj|AP012284.1| 451540 452496 1 + 957 hypothetical protein - none -
fig|6666666.67501.peg.441 CDS gi|393401708|dbj|AP012284.1| 453050 452508 -2 - 543 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.67501.peg.442 CDS gi|393401708|dbj|AP012284.1| 454956 453160 -3 - 1797 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.67501.peg.443 CDS gi|393401708|dbj|AP012284.1| 455128 455610 1 + 483 hypothetical protein - none -
fig|6666666.67501.peg.444 CDS gi|393401708|dbj|AP012284.1| 455630 455782 2 + 153 hypothetical protein - none -
fig|6666666.67501.peg.445 CDS gi|393401708|dbj|AP012284.1| 456048 456419 3 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67501.peg.446 CDS gi|393401708|dbj|AP012284.1| 456423 456890 3 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67501.peg.447 CDS gi|393401708|dbj|AP012284.1| 457179 459305 3 + 2127 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.67501.peg.448 CDS gi|393401708|dbj|AP012284.1| 459646 459533 -1 - 114 hypothetical protein - none -
fig|6666666.67501.peg.449 CDS gi|393401708|dbj|AP012284.1| 459611 460801 2 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.67501.peg.450 CDS gi|393401708|dbj|AP012284.1| 460923 461525 3 + 603 hypothetical protein - none -
fig|6666666.67501.peg.451 CDS gi|393401708|dbj|AP012284.1| 461518 462117 1 + 600 hypothetical protein - none -
fig|6666666.67501.peg.452 CDS gi|393401708|dbj|AP012284.1| 462659 462114 -2 - 546 hypothetical protein - none -
fig|6666666.67501.peg.453 CDS gi|393401708|dbj|AP012284.1| 463204 462659 -1 - 546 hypothetical protein - none -
fig|6666666.67501.peg.454 CDS gi|393401708|dbj|AP012284.1| 463658 463197 -2 - 462 hypothetical protein - none -
fig|6666666.67501.peg.455 CDS gi|393401708|dbj|AP012284.1| 463864 463658 -1 - 207 hypothetical protein - none -
fig|6666666.67501.peg.456 CDS gi|393401708|dbj|AP012284.1| 464211 463864 -3 - 348 hypothetical protein - none -
fig|6666666.67501.peg.457 CDS gi|393401708|dbj|AP012284.1| 464691 464224 -3 - 468 Alkaline shock protein 23 - none -
fig|6666666.67501.peg.458 CDS gi|393401708|dbj|AP012284.1| 465427 465732 1 + 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.67501.peg.459 CDS gi|393401708|dbj|AP012284.1| 465765 466421 3 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67501.peg.460 CDS gi|393401708|dbj|AP012284.1| 466418 467071 2 + 654 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67501.peg.461 CDS gi|393401708|dbj|AP012284.1| 467071 467376 1 + 306 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67501.peg.462 CDS gi|393401708|dbj|AP012284.1| 467398 468240 1 + 843 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67501.peg.463 CDS gi|393401708|dbj|AP012284.1| 468257 468535 2 + 279 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.67501.peg.464 CDS gi|393401708|dbj|AP012284.1| 468539 468901 2 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67501.peg.465 CDS gi|393401708|dbj|AP012284.1| 468901 469647 1 + 747 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.67501.peg.466 CDS gi|393401708|dbj|AP012284.1| 469650 470066 3 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67501.peg.467 CDS gi|393401708|dbj|AP012284.1| 470066 470296 2 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67501.peg.468 CDS gi|393401708|dbj|AP012284.1| 470299 470577 1 + 279 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.67501.peg.469 CDS gi|393401708|dbj|AP012284.1| 472412 470736 -2 - 1677 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67501.peg.470 CDS gi|393401708|dbj|AP012284.1| 474507 472441 -3 - 2067 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67501.peg.471 CDS gi|393401708|dbj|AP012284.1| 475551 474511 -3 - 1041 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67501.peg.472 CDS gi|393401708|dbj|AP012284.1| 476536 475553 -1 - 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67501.peg.473 CDS gi|393401708|dbj|AP012284.1| 477266 477634 2 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67501.peg.474 CDS gi|393401708|dbj|AP012284.1| 477637 477951 1 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67501.peg.475 CDS gi|393401708|dbj|AP012284.1| 477954 478517 3 + 564 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67501.peg.476 CDS gi|393401708|dbj|AP012284.1| 479341 480564 1 + 1224 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67501.peg.477 CDS gi|393401708|dbj|AP012284.1| 480616 481992 1 + 1377 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67501.peg.478 CDS gi|393401708|dbj|AP012284.1| 482204 483286 2 + 1083 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67501.peg.479 CDS gi|393401708|dbj|AP012284.1| 484735 484577 -1 - 159 hypothetical protein - none -
fig|6666666.67501.peg.480 CDS gi|393401708|dbj|AP012284.1| 485280 486512 3 + 1233 putative phosphatase - none -
fig|6666666.67501.peg.481 CDS gi|393401708|dbj|AP012284.1| 486804 487202 3 + 399 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.67501.peg.482 CDS gi|393401708|dbj|AP012284.1| 487218 487754 3 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67501.peg.483 CDS gi|393401708|dbj|AP012284.1| 487758 488165 3 + 408 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67501.peg.484 CDS gi|393401708|dbj|AP012284.1| 488206 488832 1 + 627 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.67501.peg.485 CDS gi|393401708|dbj|AP012284.1| 488835 489020 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67501.peg.486 CDS gi|393401708|dbj|AP012284.1| 489025 489471 1 + 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67501.peg.487 CDS gi|393401708|dbj|AP012284.1| 489698 490156 2 + 459 hypothetical protein - none -
fig|6666666.67501.peg.488 CDS gi|393401708|dbj|AP012284.1| 490312 490494 1 + 183 hypothetical protein - none -
fig|6666666.67501.peg.489 CDS gi|393401708|dbj|AP012284.1| 490706 491953 2 + 1248 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.490 CDS gi|393401708|dbj|AP012284.1| 492064 493470 1 + 1407 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.491 CDS gi|393401708|dbj|AP012284.1| 493467 494348 3 + 882 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.492 CDS gi|393401708|dbj|AP012284.1| 494516 495259 2 + 744 Putative ABC transport system membrane protein - none -
fig|6666666.67501.peg.493 CDS gi|393401708|dbj|AP012284.1| 495453 496250 3 + 798 Formate-nitrate transporter - none -
fig|6666666.67501.peg.494 CDS gi|393401708|dbj|AP012284.1| 497525 496278 -2 - 1248 Chromosome segregation ATPases - none -
fig|6666666.67501.peg.495 CDS gi|393401708|dbj|AP012284.1| 498778 497642 -1 - 1137 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.496 CDS gi|393401708|dbj|AP012284.1| 498942 498799 -3 - 144 hypothetical protein - none -
fig|6666666.67501.peg.497 CDS gi|393401708|dbj|AP012284.1| 498944 499072 2 + 129 hypothetical protein - none -
fig|6666666.67501.peg.498 CDS gi|393401708|dbj|AP012284.1| 499404 499261 -3 - 144 hypothetical protein - none -
fig|6666666.67501.peg.499 CDS gi|393401708|dbj|AP012284.1| 499383 500705 3 + 1323 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67501.peg.500 CDS gi|393401708|dbj|AP012284.1| 500705 501250 2 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67501.peg.501 CDS gi|393401708|dbj|AP012284.1| 501406 502206 1 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67501.peg.502 CDS gi|393401708|dbj|AP012284.1| 502591 504678 1 + 2088 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.67501.peg.503 CDS gi|393401708|dbj|AP012284.1| 504879 505586 3 + 708 Putative secreted protein - none -
fig|6666666.67501.peg.504 CDS gi|393401708|dbj|AP012284.1| 505925 506143 2 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67501.peg.505 CDS gi|393401708|dbj|AP012284.1| 506337 506705 3 + 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.67501.peg.506 CDS gi|393401708|dbj|AP012284.1| 506709 507113 3 + 405 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.67501.peg.507 CDS gi|393401708|dbj|AP012284.1| 507137 507742 2 + 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.67501.peg.508 CDS gi|393401708|dbj|AP012284.1| 507881 508897 2 + 1017 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67501.peg.509 CDS gi|393401708|dbj|AP012284.1| 508973 509458 2 + 486 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67501.peg.510 CDS gi|393401708|dbj|AP012284.1| 509628 509470 -3 - 159 hypothetical protein - none -
fig|6666666.67501.peg.511 CDS gi|393401708|dbj|AP012284.1| 509658 510533 3 + 876 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67501.peg.512 CDS gi|393401708|dbj|AP012284.1| 510614 511951 2 + 1338 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67501.peg.513 CDS gi|393401708|dbj|AP012284.1| 512039 512461 2 + 423 FIG00544350: hypothetical protein - none -
fig|6666666.67501.peg.514 CDS gi|393401708|dbj|AP012284.1| 513702 512458 -3 - 1245 Putative subtilisin-like cell wall associated serine protease (mycosin) - none -
fig|6666666.67501.peg.515 CDS gi|393401708|dbj|AP012284.1| 514598 513657 -2 - 942 FIG00544388: hypothetical protein - none -
fig|6666666.67501.peg.516 CDS gi|393401708|dbj|AP012284.1| 515071 514571 -1 - 501 FIG00544388: hypothetical protein - none -
fig|6666666.67501.peg.517 CDS gi|393401708|dbj|AP012284.1| 515223 519059 3 + 3837 FtsK/SpoIIIE family protein - none -
fig|6666666.67501.peg.518 CDS gi|393401708|dbj|AP012284.1| 519069 520106 3 + 1038 FIG00543916: hypothetical protein - none -
fig|6666666.67501.peg.519 CDS gi|393401708|dbj|AP012284.1| 520686 521903 3 + 1218 Integrase - none -
fig|6666666.67501.peg.520 CDS gi|393401708|dbj|AP012284.1| 522251 521865 -2 - 387 hypothetical protein - none -
fig|6666666.67501.peg.521 CDS gi|393401708|dbj|AP012284.1| 522440 522640 2 + 201 hypothetical protein - none -
fig|6666666.67501.peg.522 CDS gi|393401708|dbj|AP012284.1| 522713 523279 2 + 567 hypothetical protein - none -
fig|6666666.67501.peg.523 CDS gi|393401708|dbj|AP012284.1| 523272 524315 3 + 1044 Phage protein - none -
fig|6666666.67501.peg.524 CDS gi|393401708|dbj|AP012284.1| 524787 524969 3 + 183 hypothetical protein - none -
fig|6666666.67501.peg.525 CDS gi|393401708|dbj|AP012284.1| 524966 525925 2 + 960 Phage protein - none -
fig|6666666.67501.peg.526 CDS gi|393401708|dbj|AP012284.1| 525922 526386 1 + 465 hypothetical protein - none -
fig|6666666.67501.peg.527 CDS gi|393401708|dbj|AP012284.1| 526551 526718 3 + 168 hypothetical protein - none -
fig|6666666.67501.peg.528 CDS gi|393401708|dbj|AP012284.1| 526721 526936 2 + 216 hypothetical protein - none -
fig|6666666.67501.peg.529 CDS gi|393401708|dbj|AP012284.1| 526936 527436 1 + 501 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67501.peg.530 CDS gi|393401708|dbj|AP012284.1| 527524 527673 1 + 150 hypothetical protein - none -
fig|6666666.67501.peg.531 CDS gi|393401708|dbj|AP012284.1| 528213 528572 3 + 360 hypothetical protein - none -
fig|6666666.67501.peg.532 CDS gi|393401708|dbj|AP012284.1| 528523 529032 1 + 510 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67501.peg.533 CDS gi|393401708|dbj|AP012284.1| 529032 529382 3 + 351 hypothetical protein - none -
fig|6666666.67501.peg.534 CDS gi|393401708|dbj|AP012284.1| 529481 529609 2 + 129 hypothetical protein - none -
fig|6666666.67501.peg.535 CDS gi|393401708|dbj|AP012284.1| 529614 529973 3 + 360 hypothetical protein - none -
fig|6666666.67501.peg.536 CDS gi|393401708|dbj|AP012284.1| 529966 530385 1 + 420 hypothetical protein - none -
fig|6666666.67501.peg.537 CDS gi|393401708|dbj|AP012284.1| 530581 530694 1 + 114 hypothetical protein - none -
fig|6666666.67501.peg.538 CDS gi|393401708|dbj|AP012284.1| 530694 531332 3 + 639 hypothetical protein - none -
fig|6666666.67501.peg.539 CDS gi|393401708|dbj|AP012284.1| 531337 531687 1 + 351 hypothetical protein - none -
fig|6666666.67501.peg.540 CDS gi|393401708|dbj|AP012284.1| 531684 532322 3 + 639 hypothetical protein - none -
fig|6666666.67501.peg.541 CDS gi|393401708|dbj|AP012284.1| 532511 532633 2 + 123 hypothetical protein - none -
fig|6666666.67501.peg.542 CDS gi|393401708|dbj|AP012284.1| 533076 533195 3 + 120 hypothetical protein - none -
fig|6666666.67501.peg.543 CDS gi|393401708|dbj|AP012284.1| 533174 533512 2 + 339 hypothetical protein - none -
fig|6666666.67501.peg.544 CDS gi|393401708|dbj|AP012284.1| 533509 533766 1 + 258 hypothetical protein - none -
fig|6666666.67501.peg.545 CDS gi|393401708|dbj|AP012284.1| 533882 534142 2 + 261 hypothetical protein - none -
fig|6666666.67501.peg.546 CDS gi|393401708|dbj|AP012284.1| 534181 534561 1 + 381 hypothetical protein - none -
fig|6666666.67501.peg.547 CDS gi|393401708|dbj|AP012284.1| 534606 535121 3 + 516 hypothetical protein - none -
fig|6666666.67501.peg.548 CDS gi|393401708|dbj|AP012284.1| 535223 535822 2 + 600 DNA modification methylase - none -
fig|6666666.67501.peg.549 CDS gi|393401708|dbj|AP012284.1| 535803 536792 3 + 990 hypothetical protein - none -
fig|6666666.67501.peg.550 CDS gi|393401708|dbj|AP012284.1| 536828 538339 2 + 1512 Phage protein - none -
fig|6666666.67501.peg.551 CDS gi|393401708|dbj|AP012284.1| 538381 538956 1 + 576 Phage protein - none -
fig|6666666.67501.peg.552 CDS gi|393401708|dbj|AP012284.1| 539030 539455 2 + 426 hypothetical protein - none -
fig|6666666.67501.peg.553 CDS gi|393401708|dbj|AP012284.1| 539553 540677 3 + 1125 Phage terminase large subunit Phage packaging machinery
fig|6666666.67501.peg.554 CDS gi|393401708|dbj|AP012284.1| 540804 542378 3 + 1575 hypothetical protein - none -
fig|6666666.67501.peg.555 CDS gi|393401708|dbj|AP012284.1| 542375 543448 2 + 1074 Phage minor capsid protein #Fam0016 Phage capsid proteins
fig|6666666.67501.peg.556 CDS gi|393401708|dbj|AP012284.1| 543535 544248 1 + 714 hypothetical protein - none -
fig|6666666.67501.peg.557 CDS gi|393401708|dbj|AP012284.1| 544261 545169 1 + 909 Phage protein - none -
fig|6666666.67501.peg.558 CDS gi|393401708|dbj|AP012284.1| 545249 545692 2 + 444 hypothetical protein - none -
fig|6666666.67501.peg.559 CDS gi|393401708|dbj|AP012284.1| 545689 546036 1 + 348 hypothetical protein - none -
fig|6666666.67501.peg.560 CDS gi|393401708|dbj|AP012284.1| 546033 546362 3 + 330 hypothetical protein - none -
fig|6666666.67501.peg.561 CDS gi|393401708|dbj|AP012284.1| 546359 546793 2 + 435 hypothetical protein - none -
fig|6666666.67501.peg.562 CDS gi|393401708|dbj|AP012284.1| 546806 547642 2 + 837 hypothetical protein - none -
fig|6666666.67501.peg.563 CDS gi|393401708|dbj|AP012284.1| 547803 548219 3 + 417 hypothetical protein - none -
fig|6666666.67501.peg.564 CDS gi|393401708|dbj|AP012284.1| 548585 554491 2 + 5907 hypothetical protein - none -
fig|6666666.67501.peg.565 CDS gi|393401708|dbj|AP012284.1| 554495 555346 2 + 852 hypothetical protein - none -
fig|6666666.67501.peg.566 CDS gi|393401708|dbj|AP012284.1| 555340 558192 1 + 2853 hypothetical protein - none -
fig|6666666.67501.peg.567 CDS gi|393401708|dbj|AP012284.1| 558268 558152 -1 - 117 hypothetical protein - none -
fig|6666666.67501.peg.568 CDS gi|393401708|dbj|AP012284.1| 558255 559673 3 + 1419 hypothetical protein - none -
fig|6666666.67501.peg.569 CDS gi|393401708|dbj|AP012284.1| 559676 559996 2 + 321 Putative membrane protein - none -
fig|6666666.67501.peg.570 CDS gi|393401708|dbj|AP012284.1| 560002 560460 1 + 459 Putative membrane protein - none -
fig|6666666.67501.peg.571 CDS gi|393401708|dbj|AP012284.1| 560581 560817 1 + 237 Putative secreted protein - none -
fig|6666666.67501.peg.572 CDS gi|393401708|dbj|AP012284.1| 561182 560865 -2 - 318 hypothetical protein - none -
fig|6666666.67501.peg.573 CDS gi|393401708|dbj|AP012284.1| 561504 561271 -3 - 234 hypothetical protein - none -
fig|6666666.67501.peg.574 CDS gi|393401708|dbj|AP012284.1| 561481 561615 1 + 135 hypothetical protein - none -
fig|6666666.67501.peg.575 CDS gi|393401708|dbj|AP012284.1| 562018 561902 -1 - 117 hypothetical protein - none -
fig|6666666.67501.peg.576 CDS gi|393401708|dbj|AP012284.1| 562058 562438 2 + 381 hypothetical protein - none -
fig|6666666.67501.peg.577 CDS gi|393401708|dbj|AP012284.1| 562658 562431 -2 - 228 hypothetical protein - none -
fig|6666666.67501.peg.578 CDS gi|393401708|dbj|AP012284.1| 562866 562651 -3 - 216 hypothetical protein - none -
fig|6666666.67501.peg.579 CDS gi|393401708|dbj|AP012284.1| 563435 562941 -2 - 495 hypothetical protein - none -
fig|6666666.67501.peg.580 CDS gi|393401708|dbj|AP012284.1| 563388 563582 3 + 195 hypothetical protein - none -
fig|6666666.67501.peg.581 CDS gi|393401708|dbj|AP012284.1| 563758 564948 1 + 1191 Hyaluronate lyase (phage associated) - none -
fig|6666666.67501.peg.582 CDS gi|393401708|dbj|AP012284.1| 564948 566051 3 + 1104 hypothetical protein - none -
fig|6666666.67501.peg.583 CDS gi|393401708|dbj|AP012284.1| 566071 566865 1 + 795 hypothetical protein - none -
fig|6666666.67501.peg.584 CDS gi|393401708|dbj|AP012284.1| 567197 567478 2 + 282 FIG00544893: hypothetical protein - none -
fig|6666666.67501.peg.585 CDS gi|393401708|dbj|AP012284.1| 567815 568258 2 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67501.peg.586 CDS gi|393401708|dbj|AP012284.1| 568255 568788 1 + 534 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.67501.peg.587 CDS gi|393401708|dbj|AP012284.1| 569047 570390 1 + 1344 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67501.peg.588 CDS gi|393401708|dbj|AP012284.1| 570462 570761 3 + 300 hypothetical protein - none -
fig|6666666.67501.peg.589 CDS gi|393401708|dbj|AP012284.1| 570895 571947 1 + 1053 hypothetical protein - none -
fig|6666666.67501.peg.590 CDS gi|393401708|dbj|AP012284.1| 571941 572246 3 + 306 hypothetical protein - none -
fig|6666666.67501.peg.591 CDS gi|393401708|dbj|AP012284.1| 573282 572296 -3 - 987 FIG00996653: hypothetical protein - none -
fig|6666666.67501.peg.592 CDS gi|393401708|dbj|AP012284.1| 573295 573170 -1 - 126 hypothetical protein - none -
fig|6666666.67501.peg.593 CDS gi|393401708|dbj|AP012284.1| 573294 574406 3 + 1113 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67501.peg.594 CDS gi|393401708|dbj|AP012284.1| 574556 575050 2 + 495 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67501.peg.595 CDS gi|393401708|dbj|AP012284.1| 575591 577198 2 + 1608 putative transport protein - none -
fig|6666666.67501.peg.596 CDS gi|393401708|dbj|AP012284.1| 577387 577863 1 + 477 hypothetical protein - none -
fig|6666666.67501.peg.597 CDS gi|393401708|dbj|AP012284.1| 577982 578656 2 + 675 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.67501.peg.598 CDS gi|393401708|dbj|AP012284.1| 578657 579148 2 + 492 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67501.peg.599 CDS gi|393401708|dbj|AP012284.1| 579129 580223 3 + 1095 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67501.peg.600 CDS gi|393401708|dbj|AP012284.1| 580367 580663 2 + 297 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67501.peg.601 CDS gi|393401708|dbj|AP012284.1| 580676 582295 2 + 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67501.peg.602 CDS gi|393401708|dbj|AP012284.1| 582756 582872 3 + 117 hypothetical protein - none -
fig|6666666.67501.peg.603 CDS gi|393401708|dbj|AP012284.1| 582991 583572 1 + 582 putative RNA polymerase sigma factor - none -
fig|6666666.67501.peg.604 CDS gi|393401708|dbj|AP012284.1| 583575 584456 3 + 882 FIG00544252: hypothetical protein - none -
fig|6666666.67501.peg.605 CDS gi|393401708|dbj|AP012284.1| 584631 584488 -3 - 144 hypothetical protein - none -
fig|6666666.67501.peg.606 CDS gi|393401708|dbj|AP012284.1| 585037 586557 1 + 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67501.peg.607 CDS gi|393401708|dbj|AP012284.1| 586584 587726 3 + 1143 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67501.peg.608 CDS gi|393401708|dbj|AP012284.1| 587889 589748 3 + 1860 hypothetical protein - none -
fig|6666666.67501.peg.609 CDS gi|393401708|dbj|AP012284.1| 589816 591390 1 + 1575 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.67501.peg.610 CDS gi|393401708|dbj|AP012284.1| 591518 591967 2 + 450 hypothetical protein - none -
fig|6666666.67501.peg.611 CDS gi|393401708|dbj|AP012284.1| 593013 591964 -3 - 1050 FIG01122572: hypothetical protein - none -
fig|6666666.67501.peg.612 CDS gi|393401708|dbj|AP012284.1| 593127 594287 3 + 1161 two-component system sensor kinase - none -
fig|6666666.67501.peg.613 CDS gi|393401708|dbj|AP012284.1| 594293 594970 2 + 678 putative two-component system response regulator - none -
fig|6666666.67501.peg.614 CDS gi|393401708|dbj|AP012284.1| 595607 594975 -2 - 633 No significant database matches - none -
fig|6666666.67501.peg.615 CDS gi|393401708|dbj|AP012284.1| 595792 596658 1 + 867 FIG00546271: hypothetical protein - none -
fig|6666666.67501.peg.616 CDS gi|393401708|dbj|AP012284.1| 597437 596760 -2 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis
fig|6666666.67501.peg.617 CDS gi|393401708|dbj|AP012284.1| 598456 597434 -1 - 1023 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.67501.peg.618 CDS gi|393401708|dbj|AP012284.1| 599360 598503 -2 - 858 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.67501.peg.619 CDS gi|393401708|dbj|AP012284.1| 600450 599584 -3 - 867 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.67501.peg.620 CDS gi|393401708|dbj|AP012284.1| 600642 600776 3 + 135 hypothetical protein - none -
fig|6666666.67501.peg.621 CDS gi|393401708|dbj|AP012284.1| 600923 601420 2 + 498 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.67501.peg.622 CDS gi|393401708|dbj|AP012284.1| 601474 602721 1 + 1248 transmembrane protein, distant homology with ydbT - none -
fig|6666666.67501.peg.623 CDS gi|393401708|dbj|AP012284.1| 602781 603737 3 + 957 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.67501.peg.624 CDS gi|393401708|dbj|AP012284.1| 603823 604581 1 + 759 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67501.peg.625 CDS gi|393401708|dbj|AP012284.1| 604574 605416 2 + 843 Putative ABC transport system membrane protein - none -
fig|6666666.67501.peg.626 CDS gi|393401708|dbj|AP012284.1| 605410 606219 1 + 810 FIG00356309: hypothetical protein - none -
fig|6666666.67501.peg.627 CDS gi|393401708|dbj|AP012284.1| 606177 606857 3 + 681 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67501.peg.628 CDS gi|393401708|dbj|AP012284.1| 607274 606870 -2 - 405 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67501.peg.629 CDS gi|393401708|dbj|AP012284.1| 607412 608257 2 + 846 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.67501.peg.630 CDS gi|393401708|dbj|AP012284.1| 608250 608576 3 + 327 FIG00546438: hypothetical protein - none -
fig|6666666.67501.peg.631 CDS gi|393401708|dbj|AP012284.1| 609095 608583 -2 - 513 hypothetical protein - none -
fig|6666666.67501.peg.632 CDS gi|393401708|dbj|AP012284.1| 609682 609086 -1 - 597 hypothetical protein - none -
fig|6666666.67501.peg.633 CDS gi|393401708|dbj|AP012284.1| 611070 609979 -3 - 1092 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67501.peg.634 CDS gi|393401708|dbj|AP012284.1| 611652 611149 -3 - 504 hypothetical membrane protein - none -
fig|6666666.67501.peg.635 CDS gi|393401708|dbj|AP012284.1| 611843 613681 2 + 1839 FIG01124361: hypothetical protein - none -
fig|6666666.67501.peg.636 CDS gi|393401708|dbj|AP012284.1| 613799 614854 2 + 1056 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.637 CDS gi|393401708|dbj|AP012284.1| 614838 615890 3 + 1053 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.638 CDS gi|393401708|dbj|AP012284.1| 615887 616729 2 + 843 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.639 CDS gi|393401708|dbj|AP012284.1| 616875 617783 3 + 909 FIG00545097: hypothetical protein - none -
fig|6666666.67501.peg.640 CDS gi|393401708|dbj|AP012284.1| 619185 617869 -3 - 1317 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67501.peg.641 CDS gi|393401708|dbj|AP012284.1| 621580 619370 -1 - 2211 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) TCA Cycle
fig|6666666.67501.peg.642 CDS gi|393401708|dbj|AP012284.1| 621833 623059 2 + 1227 putative transport protein - none -
fig|6666666.67501.peg.643 CDS gi|393401708|dbj|AP012284.1| 623826 623056 -3 - 771 putative transcriptional regulator (MerR family) - none -
fig|6666666.67501.peg.644 CDS gi|393401708|dbj|AP012284.1| 623894 624793 2 + 900 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67501.peg.645 CDS gi|393401708|dbj|AP012284.1| 624881 625060 2 + 180 hypothetical protein - none -
fig|6666666.67501.peg.646 CDS gi|393401708|dbj|AP012284.1| 625435 626559 1 + 1125 secretory serine protease - none -
fig|6666666.67501.peg.647 CDS gi|393401708|dbj|AP012284.1| 626599 627636 1 + 1038 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67501.peg.648 CDS gi|393401708|dbj|AP012284.1| 627772 628857 1 + 1086 putative membrane protein - none -
fig|6666666.67501.peg.649 CDS gi|393401708|dbj|AP012284.1| 630105 628891 -3 - 1215 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.650 CDS gi|393401708|dbj|AP012284.1| 630141 631055 3 + 915 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.67501.peg.651 CDS gi|393401708|dbj|AP012284.1| 632358 631123 -3 - 1236 FIG026501: hypothetical protein - none -
fig|6666666.67501.peg.652 CDS gi|393401708|dbj|AP012284.1| 633245 632379 -2 - 867 hypothetical protein - none -
fig|6666666.67501.peg.653 CDS gi|393401708|dbj|AP012284.1| 633511 633242 -1 - 270 hypothetical protein - none -
fig|6666666.67501.peg.654 CDS gi|393401708|dbj|AP012284.1| 633567 634211 3 + 645 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.67501.peg.655 CDS gi|393401708|dbj|AP012284.1| 634415 634852 2 + 438 Putative DNA-binding protein - none -
fig|6666666.67501.peg.656 CDS gi|393401708|dbj|AP012284.1| 636487 634886 -1 - 1602 putative phospho-sugar mutase - none -
fig|6666666.67501.peg.657 CDS gi|393401708|dbj|AP012284.1| 636831 638027 3 + 1197 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67501.peg.658 CDS gi|393401708|dbj|AP012284.1| 638155 639576 1 + 1422 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Glycine cleavage system;
TCA Cycle
fig|6666666.67501.peg.659 CDS gi|393401708|dbj|AP012284.1| 639692 639835 2 + 144 hypothetical protein - none -
fig|6666666.67501.peg.660 CDS gi|393401708|dbj|AP012284.1| 640106 643531 2 + 3426 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67501.peg.661 CDS gi|393401708|dbj|AP012284.1| 645065 643602 -2 - 1464 putative transport protein - none -
fig|6666666.67501.peg.662 CDS gi|393401708|dbj|AP012284.1| 645582 645196 -3 - 387 FIG00547727: hypothetical protein - none -
fig|6666666.67501.peg.663 CDS gi|393401708|dbj|AP012284.1| 647473 645698 -1 - 1776 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67501.peg.664 CDS gi|393401708|dbj|AP012284.1| 648486 647719 -3 - 768 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67501.peg.665 CDS gi|393401708|dbj|AP012284.1| 649321 650391 1 + 1071 FIG00548218: hypothetical protein - none -
fig|6666666.67501.peg.666 CDS gi|393401708|dbj|AP012284.1| 650671 652785 1 + 2115 O-antigen acetylase - none -
fig|6666666.67501.peg.667 CDS gi|393401708|dbj|AP012284.1| 653238 652822 -3 - 417 FIG00547406: hypothetical protein - none -
fig|6666666.67501.peg.668 CDS gi|393401708|dbj|AP012284.1| 653869 653243 -1 - 627 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67501.peg.669 CDS gi|393401708|dbj|AP012284.1| 654791 653889 -2 - 903 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67501.peg.670 CDS gi|393401708|dbj|AP012284.1| 656050 655016 -1 - 1035 transcriptional regulator - none -
fig|6666666.67501.peg.671 CDS gi|393401708|dbj|AP012284.1| 656479 656231 -1 - 249 hypothetical protein - none -
fig|6666666.67501.peg.672 CDS gi|393401708|dbj|AP012284.1| 658209 656578 -3 - 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.67501.peg.673 CDS gi|393401708|dbj|AP012284.1| 660072 658441 -3 - 1632 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) - none -
fig|6666666.67501.peg.674 CDS gi|393401708|dbj|AP012284.1| 660301 661179 1 + 879 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67501.peg.675 CDS gi|393401708|dbj|AP012284.1| 661180 661650 1 + 471 FIG00545249: hypothetical protein - none -
fig|6666666.67501.peg.676 CDS gi|393401708|dbj|AP012284.1| 662402 661659 -2 - 744 hypothetical protein - none -
fig|6666666.67501.peg.677 CDS gi|393401708|dbj|AP012284.1| 663181 662435 -1 - 747 hypothetical protein - none -
fig|6666666.67501.peg.678 CDS gi|393401708|dbj|AP012284.1| 664182 663214 -3 - 969 ABC transporter, ATP-binding protein - none -
fig|6666666.67501.peg.679 CDS gi|393401708|dbj|AP012284.1| 664725 665930 3 + 1206 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67501.peg.680 CDS gi|393401708|dbj|AP012284.1| 665973 666473 3 + 501 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67501.peg.681 CDS gi|393401708|dbj|AP012284.1| 666479 666946 2 + 468 FIG00546022: hypothetical protein - none -
fig|6666666.67501.peg.682 CDS gi|393401708|dbj|AP012284.1| 667331 668416 2 + 1086 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.67501.peg.683 CDS gi|393401708|dbj|AP012284.1| 668431 669423 1 + 993 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.67501.peg.684 CDS gi|393401708|dbj|AP012284.1| 669414 670190 3 + 777 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67501.peg.685 CDS gi|393401708|dbj|AP012284.1| 670411 670208 -1 - 204 hypothetical protein - none -
fig|6666666.67501.peg.686 CDS gi|393401708|dbj|AP012284.1| 671287 670451 -1 - 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.687 CDS gi|393401708|dbj|AP012284.1| 672363 671284 -3 - 1080 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.688 CDS gi|393401708|dbj|AP012284.1| 673809 672550 -3 - 1260 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.689 CDS gi|393401708|dbj|AP012284.1| 674646 673969 -3 - 678 FIG00996117: hypothetical protein - none -
fig|6666666.67501.peg.690 CDS gi|393401708|dbj|AP012284.1| 676328 674760 -2 - 1569 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67501.peg.691 CDS gi|393401708|dbj|AP012284.1| 676344 677396 3 + 1053 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67501.peg.692 CDS gi|393401708|dbj|AP012284.1| 677571 678659 3 + 1089 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67501.peg.693 CDS gi|393401708|dbj|AP012284.1| 679191 679490 3 + 300 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67501.peg.694 CDS gi|393401708|dbj|AP012284.1| 680100 679645 -3 - 456 FIG01121108: hypothetical protein - none -
fig|6666666.67501.peg.695 CDS gi|393401708|dbj|AP012284.1| 680194 680595 1 + 402 hypothetical protein - none -
fig|6666666.67501.peg.696 CDS gi|393401708|dbj|AP012284.1| 680725 682101 1 + 1377 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67501.peg.697 CDS gi|393401708|dbj|AP012284.1| 682275 683261 3 + 987 Putative regulator of the mannose operon, ManO Mannose Metabolism
fig|6666666.67501.peg.698 CDS gi|393401708|dbj|AP012284.1| 683317 684474 1 + 1158 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67501.peg.699 CDS gi|393401708|dbj|AP012284.1| 685324 684548 -1 - 777 Putative secreted protein - none -
fig|6666666.67501.peg.700 CDS gi|393401708|dbj|AP012284.1| 685586 685732 2 + 147 hypothetical protein - none -
fig|6666666.67501.peg.701 CDS gi|393401708|dbj|AP012284.1| 685749 685865 3 + 117 hypothetical protein - none -
fig|6666666.67501.peg.702 CDS gi|393401708|dbj|AP012284.1| 685980 686333 3 + 354 FIG00544092: hypothetical protein - none -
fig|6666666.67501.peg.703 CDS gi|393401708|dbj|AP012284.1| 686521 687960 1 + 1440 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis
fig|6666666.67501.peg.704 CDS gi|393401708|dbj|AP012284.1| 687960 688583 3 + 624 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.67501.peg.705 CDS gi|393401708|dbj|AP012284.1| 688720 689397 1 + 678 DNA-binding response regulator mtrA - none -
fig|6666666.67501.peg.706 CDS gi|393401708|dbj|AP012284.1| 689427 691076 3 + 1650 Sensor histidine kinase MtrB (EC 2.7.3.-) - none -
fig|6666666.67501.peg.707 CDS gi|393401708|dbj|AP012284.1| 691078 692814 1 + 1737 LpqB - none -
fig|6666666.67501.peg.708 CDS gi|393401708|dbj|AP012284.1| 692836 693444 1 + 609 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.67501.peg.709 CDS gi|393401708|dbj|AP012284.1| 693582 694244 3 + 663 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67501.peg.710 CDS gi|393401708|dbj|AP012284.1| 694400 696943 2 + 2544 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67501.peg.711 CDS gi|393401708|dbj|AP012284.1| 697388 696957 -2 - 432 hypothetical protein - none -
fig|6666666.67501.peg.712 CDS gi|393401708|dbj|AP012284.1| 697545 697955 3 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.67501.peg.713 CDS gi|393401708|dbj|AP012284.1| 697955 698461 2 + 507 FIG00996471: hypothetical protein - none -
fig|6666666.67501.peg.714 CDS gi|393401708|dbj|AP012284.1| 698648 699706 2 + 1059 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.67501.peg.715 CDS gi|393401708|dbj|AP012284.1| 699722 700996 2 + 1275 POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) - none -
fig|6666666.67501.peg.716 CDS gi|393401708|dbj|AP012284.1| 701872 701006 -1 - 867 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.67501.peg.717 CDS gi|393401708|dbj|AP012284.1| 703296 702022 -3 - 1275 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67501.peg.718 CDS gi|393401708|dbj|AP012284.1| 703326 703925 3 + 600 FIG00543821: hypothetical protein - none -
fig|6666666.67501.peg.719 CDS gi|393401708|dbj|AP012284.1| 704446 703943 -1 - 504 Cys-tRNA(Pro) deacylase YbaK - none -
fig|6666666.67501.peg.720 CDS gi|393401708|dbj|AP012284.1| 704494 705162 1 + 669 RNA polymerase sigma-70 factor CBSS-313593.3.peg.2729;
Transcription initiation, bacterial sigma factors
fig|6666666.67501.peg.721 CDS gi|393401708|dbj|AP012284.1| 705930 705670 -3 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67501.peg.722 CDS gi|393401708|dbj|AP012284.1| 706550 706972 2 + 423 FIG00543921: hypothetical protein - none -
fig|6666666.67501.peg.723 CDS gi|393401708|dbj|AP012284.1| 707897 707037 -2 - 861 Putative secreted hydrolase - none -
fig|6666666.67501.peg.724 CDS gi|393401708|dbj|AP012284.1| 709195 707990 -1 - 1206 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67501.peg.725 CDS gi|393401708|dbj|AP012284.1| 710517 709192 -3 - 1326 putative ATP-dependent RNA helicase - none -
fig|6666666.67501.peg.726 CDS gi|393401708|dbj|AP012284.1| 710812 711039 1 + 228 FIG00543928: hypothetical protein - none -
fig|6666666.67501.peg.727 CDS gi|393401708|dbj|AP012284.1| 711042 711932 3 + 891 FIG01121705: hypothetical protein - none -
fig|6666666.67501.peg.728 CDS gi|393401708|dbj|AP012284.1| 711987 712826 3 + 840 FIG00994019: hypothetical protein - none -
fig|6666666.67501.peg.729 CDS gi|393401708|dbj|AP012284.1| 712860 715994 3 + 3135 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67501.peg.730 CDS gi|393401708|dbj|AP012284.1| 715991 719215 2 + 3225 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67501.peg.731 CDS gi|393401708|dbj|AP012284.1| 719252 720331 2 + 1080 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67501.peg.732 CDS gi|393401708|dbj|AP012284.1| 720387 721046 3 + 660 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67501.peg.733 CDS gi|393401708|dbj|AP012284.1| 721039 723090 1 + 2052 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67501.peg.734 CDS gi|393401708|dbj|AP012284.1| 723993 723094 -3 - 900 FIG00544187: hypothetical protein - none -
fig|6666666.67501.peg.735 CDS gi|393401708|dbj|AP012284.1| 723977 724492 2 + 516 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67501.peg.736 CDS gi|393401708|dbj|AP012284.1| 725944 724556 -1 - 1389 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67501.peg.737 CDS gi|393401708|dbj|AP012284.1| 726026 727081 2 + 1056 Lon-like protease with PDZ domain - none -
fig|6666666.67501.peg.738 CDS gi|393401708|dbj|AP012284.1| 727760 727086 -2 - 675 FIG00544133: hypothetical protein - none -
fig|6666666.67501.peg.739 CDS gi|393401708|dbj|AP012284.1| 728308 727805 -1 - 504 FIG129854: hypothetical protein - none -
fig|6666666.67501.peg.740 CDS gi|393401708|dbj|AP012284.1| 728450 731416 2 + 2967 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67501.peg.741 CDS gi|393401708|dbj|AP012284.1| 731909 732073 2 + 165 Phage protein - none -
fig|6666666.67501.peg.742 CDS gi|393401708|dbj|AP012284.1| 732125 732280 2 + 156 GTPases - Sulfate adenylate transferase subunit 1 - none -
fig|6666666.67501.peg.743 CDS gi|393401708|dbj|AP012284.1| 734473 733631 -1 - 843 hypothetical protein - none -
fig|6666666.67501.peg.744 CDS gi|393401708|dbj|AP012284.1| 735858 734491 -3 - 1368 hypothetical protein - none -
fig|6666666.67501.peg.745 CDS gi|393401708|dbj|AP012284.1| 739734 735892 -3 - 3843 non-ribosomal peptide synthetase - none -
fig|6666666.67501.peg.746 CDS gi|393401708|dbj|AP012284.1| 740880 741359 3 + 480 hypothetical protein - none -
fig|6666666.67501.peg.747 CDS gi|393401708|dbj|AP012284.1| 741899 742189 2 + 291 hypothetical protein - none -
fig|6666666.67501.peg.748 CDS gi|393401708|dbj|AP012284.1| 742610 744049 2 + 1440 L-asparagine permease - none -
fig|6666666.67501.peg.749 CDS gi|393401708|dbj|AP012284.1| 744164 744301 2 + 138 hypothetical protein - none -
fig|6666666.67501.peg.750 CDS gi|393401708|dbj|AP012284.1| 744366 745826 3 + 1461 Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67501.peg.751 CDS gi|393401708|dbj|AP012284.1| 745842 747398 3 + 1557 Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1) Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67501.peg.752 CDS gi|393401708|dbj|AP012284.1| 747408 747671 3 + 264 Clusters with Methylmalonyl-CoA carboxyltransferase (EC 2.1.3.1) - none -
fig|6666666.67501.peg.753 CDS gi|393401708|dbj|AP012284.1| 747696 748058 3 + 363 Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.67501.peg.754 CDS gi|393401708|dbj|AP012284.1| 748154 749338 2 + 1185 No significant database matches - none -
fig|6666666.67501.peg.755 CDS gi|393401708|dbj|AP012284.1| 750217 749411 -1 - 807 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67501.peg.756 CDS gi|393401708|dbj|AP012284.1| 751146 750262 -3 - 885 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67501.peg.757 CDS gi|393401708|dbj|AP012284.1| 751336 752439 1 + 1104 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67501.peg.758 CDS gi|393401708|dbj|AP012284.1| 752949 752476 -3 - 474 DNA topology modulation protein - none -
fig|6666666.67501.peg.759 CDS gi|393401708|dbj|AP012284.1| 754625 752997 -2 - 1629 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.67501.peg.760 CDS gi|393401708|dbj|AP012284.1| 754922 755611 2 + 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67501.peg.761 CDS gi|393401708|dbj|AP012284.1| 755633 756535 2 + 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67501.peg.762 CDS gi|393401708|dbj|AP012284.1| 756658 757149 1 + 492 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67501.peg.763 CDS gi|393401708|dbj|AP012284.1| 758089 758811 1 + 723 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.67501.peg.764 CDS gi|393401708|dbj|AP012284.1| 759636 758875 -3 - 762 hypothetical protein - none -
fig|6666666.67501.peg.765 CDS gi|393401708|dbj|AP012284.1| 760073 759918 -2 - 156 hypothetical protein - none -
fig|6666666.67501.peg.766 CDS gi|393401708|dbj|AP012284.1| 760095 761087 3 + 993 Iron compound ABC uptake transporter substrate-binding protein PiuA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.767 CDS gi|393401708|dbj|AP012284.1| 761203 762168 1 + 966 Petrobactin ABC transporter, permease protein I - none -
fig|6666666.67501.peg.768 CDS gi|393401708|dbj|AP012284.1| 762161 763219 2 + 1059 Petrobactin ABC transporter, permease protein II - none -
fig|6666666.67501.peg.769 CDS gi|393401708|dbj|AP012284.1| 763216 763971 1 + 756 Petrobactin ABC transporter, ATP-binding protein - none -
fig|6666666.67501.peg.770 CDS gi|393401708|dbj|AP012284.1| 764525 764665 2 + 141 hypothetical protein - none -
fig|6666666.67501.peg.772 CDS gi|393401708|dbj|AP012284.1| 771348 770179 -3 - 1170 PLP-dependent aminotransferase - none -
fig|6666666.67501.peg.773 CDS gi|393401708|dbj|AP012284.1| 771989 771348 -2 - 642 FIG00546748: hypothetical protein - none -
fig|6666666.67501.peg.774 CDS gi|393401708|dbj|AP012284.1| 773705 772056 -2 - 1650 DNA repair helicase - none -
fig|6666666.67501.peg.775 CDS gi|393401708|dbj|AP012284.1| 776127 773821 -3 - 2307 hypothetical protein - none -
fig|6666666.67501.peg.776 CDS gi|393401708|dbj|AP012284.1| 776204 776383 2 + 180 FIG00543815: hypothetical protein - none -
fig|6666666.67501.peg.777 CDS gi|393401708|dbj|AP012284.1| 777139 776516 -1 - 624 FIG00996461: hypothetical protein - none -
fig|6666666.67501.peg.778 CDS gi|393401708|dbj|AP012284.1| 777961 778353 1 + 393 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67501.peg.779 CDS gi|393401708|dbj|AP012284.1| 778954 778427 -1 - 528 FIG00545981: hypothetical protein - none -
fig|6666666.67501.peg.780 CDS gi|393401708|dbj|AP012284.1| 779927 778983 -2 - 945 glutamine cyclotransferase - none -
fig|6666666.67501.peg.781 CDS gi|393401708|dbj|AP012284.1| 780029 780718 2 + 690 FIG01121526: hypothetical protein - none -
fig|6666666.67501.peg.782 CDS gi|393401708|dbj|AP012284.1| 780816 782411 3 + 1596 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67501.peg.783 CDS gi|393401708|dbj|AP012284.1| 782572 783174 1 + 603 putative rRNA methylase - none -
fig|6666666.67501.peg.784 CDS gi|393401708|dbj|AP012284.1| 783330 783443 3 + 114 putative rRNA methylase - none -
fig|6666666.67501.peg.785 CDS gi|393401708|dbj|AP012284.1| 784346 783444 -2 - 903 FIG00544583: hypothetical protein - none -
fig|6666666.67501.peg.786 CDS gi|393401708|dbj|AP012284.1| 785481 784414 -3 - 1068 FIG00545091: hypothetical protein - none -
fig|6666666.67501.peg.787 CDS gi|393401708|dbj|AP012284.1| 786814 785684 -1 - 1131 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67501.peg.788 CDS gi|393401708|dbj|AP012284.1| 787098 787220 3 + 123 hypothetical protein - none -
fig|6666666.67501.peg.789 CDS gi|393401708|dbj|AP012284.1| 787481 788776 2 + 1296 Citrate synthase (si) (EC 2.3.3.1) TCA Cycle
fig|6666666.67501.peg.790 CDS gi|393401708|dbj|AP012284.1| 788960 789319 2 + 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67501.peg.791 CDS gi|393401708|dbj|AP012284.1| 790898 789393 -2 - 1506 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67501.peg.792 CDS gi|393401708|dbj|AP012284.1| 791700 791080 -3 - 621 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67501.peg.793 CDS gi|393401708|dbj|AP012284.1| 792099 792212 3 + 114 hypothetical protein - none -
fig|6666666.67501.peg.794 CDS gi|393401708|dbj|AP012284.1| 792240 793103 3 + 864 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67501.peg.795 CDS gi|393401708|dbj|AP012284.1| 793195 794028 1 + 834 Enoyl-CoA hydratase (EC 4.2.1.17) - none -
fig|6666666.67501.peg.796 CDS gi|393401708|dbj|AP012284.1| 794433 794774 3 + 342 FIG00544151: hypothetical protein - none -
fig|6666666.67501.peg.797 CDS gi|393401708|dbj|AP012284.1| 794777 796420 2 + 1644 putative transport protein - none -
fig|6666666.67501.peg.798 CDS gi|393401708|dbj|AP012284.1| 796628 797386 2 + 759 FIG00544899: hypothetical protein - none -
fig|6666666.67501.peg.799 CDS gi|393401708|dbj|AP012284.1| 798340 797432 -1 - 909 Putative secreted protein - none -
fig|6666666.67501.peg.800 CDS gi|393401708|dbj|AP012284.1| 798448 798585 1 + 138 hypothetical protein - none -
fig|6666666.67501.peg.801 CDS gi|393401708|dbj|AP012284.1| 799856 798582 -2 - 1275 Na+/H+ antiporter - none -
fig|6666666.67501.peg.802 CDS gi|393401708|dbj|AP012284.1| 800525 799944 -2 - 582 hypothetical protein - none -
fig|6666666.67501.peg.803 CDS gi|393401708|dbj|AP012284.1| 802309 800903 -1 - 1407 putative transporter - none -
fig|6666666.67501.peg.804 CDS gi|393401708|dbj|AP012284.1| 803370 802300 -3 - 1071 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67501.peg.805 CDS gi|393401708|dbj|AP012284.1| 804725 803367 -2 - 1359 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.806 CDS gi|393401708|dbj|AP012284.1| 805705 804719 -1 - 987 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67501.peg.807 CDS gi|393401708|dbj|AP012284.1| 806670 805702 -3 - 969 oxygenase - none -
fig|6666666.67501.peg.808 CDS gi|393401708|dbj|AP012284.1| 806860 808392 1 + 1533 ABC transporter solute-bing protein - none -
fig|6666666.67501.peg.809 CDS gi|393401708|dbj|AP012284.1| 808396 809352 1 + 957 ABC transporter permease protein - none -
fig|6666666.67501.peg.810 CDS gi|393401708|dbj|AP012284.1| 809349 810125 3 + 777 hypothetical protein - none -
fig|6666666.67501.peg.811 CDS gi|393401708|dbj|AP012284.1| 810122 811573 2 + 1452 ABC peptide transporter, ATP-binding component - none -
fig|6666666.67501.peg.812 CDS gi|393401708|dbj|AP012284.1| 812106 811990 -3 - 117 hypothetical protein - none -
fig|6666666.67501.peg.813 CDS gi|393401708|dbj|AP012284.1| 813091 812891 -1 - 201 hypothetical protein - none -
fig|6666666.67501.peg.814 CDS gi|393401708|dbj|AP012284.1| 813809 814087 2 + 279 FIG00544401: hypothetical protein - none -
fig|6666666.67501.peg.815 CDS gi|393401708|dbj|AP012284.1| 814094 814849 2 + 756 Precorrin-6A synthase (EC 2.1.1.152) - none -
fig|6666666.67501.peg.816 CDS gi|393401708|dbj|AP012284.1| 815097 814846 -3 - 252 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.67501.peg.817 CDS gi|393401708|dbj|AP012284.1| 815643 815116 -3 - 528 Dihydrofolate reductase (EC 1.5.1.3) Folate Biosynthesis
fig|6666666.67501.peg.818 CDS gi|393401708|dbj|AP012284.1| 816440 815643 -2 - 798 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.67501.peg.819 CDS gi|393401708|dbj|AP012284.1| 817223 816555 -2 - 669 inositol monophosphatase family protein - none -
fig|6666666.67501.peg.820 CDS gi|393401708|dbj|AP012284.1| 817504 822543 1 + 5040 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67501.peg.821 CDS gi|393401708|dbj|AP012284.1| 823204 822548 -1 - 657 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.67501.peg.822 CDS gi|393401708|dbj|AP012284.1| 823248 824069 3 + 822 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67501.peg.823 CDS gi|393401708|dbj|AP012284.1| 824112 824525 3 + 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67501.peg.824 CDS gi|393401708|dbj|AP012284.1| 826232 824589 -2 - 1644 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.825 CDS gi|393401708|dbj|AP012284.1| 826412 827899 2 + 1488 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67501.peg.826 CDS gi|393401708|dbj|AP012284.1| 828238 827936 -1 - 303 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67501.peg.827 CDS gi|393401708|dbj|AP012284.1| 828380 830947 2 + 2568 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67501.peg.828 CDS gi|393401708|dbj|AP012284.1| 831783 831070 -3 - 714 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67501.peg.829 CDS gi|393401708|dbj|AP012284.1| 832254 833771 3 + 1518 FIG00945484: hypothetical protein - none -
fig|6666666.67501.peg.830 CDS gi|393401708|dbj|AP012284.1| 833833 834447 1 + 615 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) De Novo Purine Biosynthesis
fig|6666666.67501.peg.831 CDS gi|393401708|dbj|AP012284.1| 834440 836017 2 + 1578 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67501.peg.832 CDS gi|393401708|dbj|AP012284.1| 836070 836189 3 + 120 hypothetical protein - none -
fig|6666666.67501.peg.833 CDS gi|393401708|dbj|AP012284.1| 836321 837040 2 + 720 putative glutamate uptake system ATP-binding protein - none -
fig|6666666.67501.peg.834 CDS gi|393401708|dbj|AP012284.1| 837087 837971 3 + 885 glutamate-binding protein GluB - none -
fig|6666666.67501.peg.835 CDS gi|393401708|dbj|AP012284.1| 838007 838693 2 + 687 ABC-type amino acid transport system, permease component - none -
fig|6666666.67501.peg.836 CDS gi|393401708|dbj|AP012284.1| 838690 839628 1 + 939 glutamate permease - none -
fig|6666666.67501.peg.837 CDS gi|393401708|dbj|AP012284.1| 839653 840555 1 + 903 Citrate lyase beta chain (EC 4.1.3.6) - none -
fig|6666666.67501.peg.838 CDS gi|393401708|dbj|AP012284.1| 841308 840613 -3 - 696 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.839 CDS gi|393401708|dbj|AP012284.1| 842385 841471 -3 - 915 No significant database matches - none -
fig|6666666.67501.peg.840 CDS gi|393401708|dbj|AP012284.1| 842842 842594 -1 - 249 SSU ribosomal protein S18p - none -
fig|6666666.67501.peg.841 CDS gi|393401708|dbj|AP012284.1| 843162 842857 -3 - 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.67501.peg.842 CDS gi|393401708|dbj|AP012284.1| 843330 843166 -3 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67501.peg.843 CDS gi|393401708|dbj|AP012284.1| 843474 843334 -3 - 141 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67501.peg.844 CDS gi|393401708|dbj|AP012284.1| 844150 844416 1 + 267 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.67501.peg.845 CDS gi|393401708|dbj|AP012284.1| 844435 844608 1 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67501.peg.846 CDS gi|393401708|dbj|AP012284.1| 844752 845444 3 + 693 Mycobacterial persistence regulator MprA (Two component response transcriptional regulatory protein) - none -
fig|6666666.67501.peg.847 CDS gi|393401708|dbj|AP012284.1| 845441 846985 2 + 1545 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.67501.peg.848 CDS gi|393401708|dbj|AP012284.1| 847184 848653 2 + 1470 HtrA protease/chaperone protein Periplasmic Stress Response
fig|6666666.67501.peg.849 CDS gi|393401708|dbj|AP012284.1| 848748 849350 3 + 603 molybdopterin biosynthesis enzyme - none -
fig|6666666.67501.peg.850 CDS gi|393401708|dbj|AP012284.1| 850057 849644 -1 - 414 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67501.peg.851 CDS gi|393401708|dbj|AP012284.1| 850840 850142 -1 - 699 hypothetical protein - none -
fig|6666666.67501.peg.852 CDS gi|393401708|dbj|AP012284.1| 851518 850910 -1 - 609 hypothetical protein - none -
fig|6666666.67501.peg.853 CDS gi|393401708|dbj|AP012284.1| 851526 852578 3 + 1053 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67501.peg.854 CDS gi|393401708|dbj|AP012284.1| 852833 854098 2 + 1266 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67501.peg.855 CDS gi|393401708|dbj|AP012284.1| 854118 854834 3 + 717 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.67501.peg.856 CDS gi|393401708|dbj|AP012284.1| 854996 856174 2 + 1179 FIG00544639: hypothetical protein - none -
fig|6666666.67501.peg.857 CDS gi|393401708|dbj|AP012284.1| 856199 856612 2 + 414 FIG00998994: hypothetical protein - none -
fig|6666666.67501.peg.858 CDS gi|393401708|dbj|AP012284.1| 856599 857282 3 + 684 hypothetical membrane protein - none -
fig|6666666.67501.peg.859 CDS gi|393401708|dbj|AP012284.1| 859070 857343 -2 - 1728 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67501.peg.860 CDS gi|393401708|dbj|AP012284.1| 859466 861457 2 + 1992 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67501.peg.861 CDS gi|393401708|dbj|AP012284.1| 861611 863140 2 + 1530 FIG00546395: hypothetical protein - none -
fig|6666666.67501.peg.862 CDS gi|393401708|dbj|AP012284.1| 863277 864182 3 + 906 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67501.peg.863 CDS gi|393401708|dbj|AP012284.1| 864203 866035 2 + 1833 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67501.peg.864 CDS gi|393401708|dbj|AP012284.1| 866103 866945 3 + 843 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67501.peg.865 CDS gi|393401708|dbj|AP012284.1| 867335 867222 -2 - 114 hypothetical protein - none -
fig|6666666.67501.peg.866 CDS gi|393401708|dbj|AP012284.1| 867403 868434 1 + 1032 Cell wall-binding protein - none -
fig|6666666.67501.peg.867 CDS gi|393401708|dbj|AP012284.1| 868627 869499 1 + 873 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.67501.peg.868 CDS gi|393401708|dbj|AP012284.1| 869508 870467 3 + 960 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67501.peg.869 CDS gi|393401708|dbj|AP012284.1| 870481 872295 1 + 1815 ABC transporter, ATP-binding protein - none -
fig|6666666.67501.peg.870 CDS gi|393401708|dbj|AP012284.1| 872344 872667 1 + 324 FIG00544339: hypothetical protein - none -
fig|6666666.67501.peg.871 CDS gi|393401708|dbj|AP012284.1| 872827 873264 1 + 438 hypothetical protein - none -
fig|6666666.67501.peg.872 CDS gi|393401708|dbj|AP012284.1| 873921 875147 3 + 1227 putative secreted protein - none -
fig|6666666.67501.peg.873 CDS gi|393401708|dbj|AP012284.1| 875193 876056 3 + 864 FIG00545275: hypothetical protein - none -
fig|6666666.67501.peg.874 CDS gi|393401708|dbj|AP012284.1| 876851 876141 -2 - 711 Riboflavin transporter PnuX Riboflavin, FMN and FAD metabolism
fig|6666666.67501.peg.875 CDS gi|393401708|dbj|AP012284.1| 877697 876879 -2 - 819 hypothetical protein - none -
fig|6666666.67501.peg.876 CDS gi|393401708|dbj|AP012284.1| 877882 878952 1 + 1071 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67501.peg.877 CDS gi|393401708|dbj|AP012284.1| 880199 878949 -2 - 1251 FIG00544244: hypothetical protein - none -
fig|6666666.67501.peg.878 CDS gi|393401708|dbj|AP012284.1| 880935 880714 -3 - 222 hypothetical protein - none -
fig|6666666.67501.peg.879 CDS gi|393401708|dbj|AP012284.1| 882701 881271 -2 - 1431 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.880 CDS gi|393401708|dbj|AP012284.1| 883097 883210 2 + 114 hypothetical protein - none -
fig|6666666.67501.peg.881 CDS gi|393401708|dbj|AP012284.1| 883266 883919 3 + 654 hypothetical protein - none -
fig|6666666.67501.peg.882 CDS gi|393401708|dbj|AP012284.1| 884000 885019 2 + 1020 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.67501.peg.883 CDS gi|393401708|dbj|AP012284.1| 886719 885085 -3 - 1635 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67501.peg.884 CDS gi|393401708|dbj|AP012284.1| 887674 886820 -1 - 855 putative oxidoreductase - none -
fig|6666666.67501.peg.885 CDS gi|393401708|dbj|AP012284.1| 888335 887688 -2 - 648 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67501.peg.886 CDS gi|393401708|dbj|AP012284.1| 888365 889387 2 + 1023 dioxygenase( EC:1.13.11.32 ) - none -
fig|6666666.67501.peg.887 CDS gi|393401708|dbj|AP012284.1| 889446 889625 3 + 180 hypothetical protein - none -
fig|6666666.67501.peg.888 CDS gi|393401708|dbj|AP012284.1| 890085 889603 -3 - 483 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67501.peg.889 CDS gi|393401708|dbj|AP012284.1| 890106 890228 3 + 123 hypothetical protein - none -
fig|6666666.67501.peg.890 CDS gi|393401708|dbj|AP012284.1| 890863 890240 -1 - 624 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67501.peg.891 CDS gi|393401708|dbj|AP012284.1| 893008 891134 -1 - 1875 Glycogen debranching enzyme (EC 3.2.1.-) / Pullulanase (EC 3.2.1.41) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.67501.peg.892 CDS gi|393401708|dbj|AP012284.1| 894086 893106 -2 - 981 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67501.peg.893 CDS gi|393401708|dbj|AP012284.1| 895561 894098 -1 - 1464 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67501.peg.894 CDS gi|393401708|dbj|AP012284.1| 895838 897406 2 + 1569 Multicopper oxidase Copper homeostasis
fig|6666666.67501.peg.895 CDS gi|393401708|dbj|AP012284.1| 897501 898655 3 + 1155 FIG00548642: hypothetical protein - none -
fig|6666666.67501.peg.896 CDS gi|393401708|dbj|AP012284.1| 898943 899590 2 + 648 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.897 CDS gi|393401708|dbj|AP012284.1| 899674 903465 1 + 3792 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67501.peg.898 CDS gi|393401708|dbj|AP012284.1| 905167 903677 -1 - 1491 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.67501.peg.899 CDS gi|393401708|dbj|AP012284.1| 905430 906035 3 + 606 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67501.peg.900 CDS gi|393401708|dbj|AP012284.1| 906167 906916 2 + 750 FIG00997322: hypothetical protein - none -
fig|6666666.67501.peg.901 CDS gi|393401708|dbj|AP012284.1| 906993 907145 3 + 153 hypothetical protein - none -
fig|6666666.67501.peg.902 CDS gi|393401708|dbj|AP012284.1| 907149 908426 3 + 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.903 CDS gi|393401708|dbj|AP012284.1| 908599 909141 1 + 543 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67501.peg.904 CDS gi|393401708|dbj|AP012284.1| 909204 909770 3 + 567 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67501.peg.905 CDS gi|393401708|dbj|AP012284.1| 909767 910738 2 + 972 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67501.peg.906 CDS gi|393401708|dbj|AP012284.1| 911581 912609 1 + 1029 Transcriptional regulator, AraC family - none -
fig|6666666.67501.peg.907 CDS gi|393401708|dbj|AP012284.1| 912727 913548 1 + 822 FIG00543890: hypothetical protein - none -
fig|6666666.67501.peg.908 CDS gi|393401708|dbj|AP012284.1| 913718 913605 -2 - 114 hypothetical protein - none -
fig|6666666.67501.peg.909 CDS gi|393401708|dbj|AP012284.1| 913852 914097 1 + 246 hypothetical protein - none -
fig|6666666.67501.peg.910 CDS gi|393401708|dbj|AP012284.1| 914641 914120 -1 - 522 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67501.peg.911 CDS gi|393401708|dbj|AP012284.1| 915371 914910 -2 - 462 FIG00544319: hypothetical protein - none -
fig|6666666.67501.peg.912 CDS gi|393401708|dbj|AP012284.1| 915584 916474 2 + 891 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67501.peg.913 CDS gi|393401708|dbj|AP012284.1| 916808 917095 2 + 288 FIG00543949: hypothetical protein - none -
fig|6666666.67501.peg.914 CDS gi|393401708|dbj|AP012284.1| 917165 917962 2 + 798 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67501.peg.915 CDS gi|393401708|dbj|AP012284.1| 917959 918459 1 + 501 FIG00544436: hypothetical protein - none -
fig|6666666.67501.peg.916 CDS gi|393401708|dbj|AP012284.1| 919316 918456 -2 - 861 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67501.peg.917 CDS gi|393401708|dbj|AP012284.1| 919633 920922 1 + 1290 Serine hydroxymethyltransferase (EC 2.1.2.1) Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.67501.peg.918 CDS gi|393401708|dbj|AP012284.1| 922710 921004 -3 - 1707 Permeases of the major facilitator superfamily - none -
fig|6666666.67501.peg.919 CDS gi|393401708|dbj|AP012284.1| 923403 922774 -3 - 630 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.920 CDS gi|393401708|dbj|AP012284.1| 924037 923672 -1 - 366 FIG00546727: hypothetical protein - none -
fig|6666666.67501.peg.921 CDS gi|393401708|dbj|AP012284.1| 924003 924797 3 + 795 putative LysR-family transcriptional regulator - none -
fig|6666666.67501.peg.922 CDS gi|393401708|dbj|AP012284.1| 924988 925572 1 + 585 FIG00544545: hypothetical protein - none -
fig|6666666.67501.peg.923 CDS gi|393401708|dbj|AP012284.1| 925651 926211 1 + 561 sortase or related acyltransferase - none -
fig|6666666.67501.peg.924 CDS gi|393401708|dbj|AP012284.1| 927852 926278 -3 - 1575 permease of the major facilitator superfamily - none -
fig|6666666.67501.peg.925 CDS gi|393401708|dbj|AP012284.1| 928223 927849 -2 - 375 hypothetical protein - none -
fig|6666666.67501.peg.926 CDS gi|393401708|dbj|AP012284.1| 930046 928643 -1 - 1404 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67501.peg.927 CDS gi|393401708|dbj|AP012284.1| 930213 930329 3 + 117 hypothetical protein - none -
fig|6666666.67501.peg.928 CDS gi|393401708|dbj|AP012284.1| 931318 930308 -1 - 1011 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.929 CDS gi|393401708|dbj|AP012284.1| 931619 932188 2 + 570 FIG00820022: hypothetical protein - none -
fig|6666666.67501.peg.930 CDS gi|393401708|dbj|AP012284.1| 932504 932214 -2 - 291 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67501.peg.931 CDS gi|393401708|dbj|AP012284.1| 933797 932556 -2 - 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67501.peg.932 CDS gi|393401708|dbj|AP012284.1| 933896 934921 2 + 1026 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67501.peg.933 CDS gi|393401708|dbj|AP012284.1| 935796 934993 -3 - 804 FIG00544176: hypothetical protein - none -
fig|6666666.67501.peg.934 CDS gi|393401708|dbj|AP012284.1| 937497 935956 -3 - 1542 FIG00546199: hypothetical protein - none -
fig|6666666.67501.peg.935 CDS gi|393401708|dbj|AP012284.1| 937667 938752 2 + 1086 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.67501.peg.936 CDS gi|393401708|dbj|AP012284.1| 939410 938871 -2 - 540 hypothetical protein - none -
fig|6666666.67501.peg.937 CDS gi|393401708|dbj|AP012284.1| 939633 939929 3 + 297 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.67501.peg.938 CDS gi|393401708|dbj|AP012284.1| 941611 939995 -1 - 1617 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67501.peg.939 CDS gi|393401708|dbj|AP012284.1| 943326 941650 -3 - 1677 hypothetical protein - none -
fig|6666666.67501.peg.940 CDS gi|393401708|dbj|AP012284.1| 945713 943389 -2 - 2325 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67501.peg.941 CDS gi|393401708|dbj|AP012284.1| 946837 945911 -1 - 927 Membrane protein, putative - none -
fig|6666666.67501.peg.942 CDS gi|393401708|dbj|AP012284.1| 946937 947821 2 + 885 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67501.peg.943 CDS gi|393401708|dbj|AP012284.1| 947973 948587 3 + 615 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67501.peg.944 CDS gi|393401708|dbj|AP012284.1| 948885 950285 3 + 1401 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67501.peg.945 CDS gi|393401708|dbj|AP012284.1| 950282 951037 2 + 756 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67501.peg.946 CDS gi|393401708|dbj|AP012284.1| 951034 951501 1 + 468 FIG00546937: hypothetical protein - none -
fig|6666666.67501.peg.947 CDS gi|393401708|dbj|AP012284.1| 951498 951884 3 + 387 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67501.peg.948 CDS gi|393401708|dbj|AP012284.1| 952137 953717 3 + 1581 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.67501.peg.949 CDS gi|393401708|dbj|AP012284.1| 953810 954736 2 + 927 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67501.peg.950 CDS gi|393401708|dbj|AP012284.1| 954729 955688 3 + 960 ABC-type transporter, permease component - none -
fig|6666666.67501.peg.951 CDS gi|393401708|dbj|AP012284.1| 955694 957370 2 + 1677 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.952 CDS gi|393401708|dbj|AP012284.1| 957540 958076 3 + 537 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67501.peg.953 CDS gi|393401708|dbj|AP012284.1| 958073 958759 2 + 687 ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.954 CDS gi|393401708|dbj|AP012284.1| 958759 961350 1 + 2592 hypothetical protein - none -
fig|6666666.67501.peg.955 CDS gi|393401708|dbj|AP012284.1| 962164 961424 -1 - 741 FIG00548480: hypothetical protein - none -
fig|6666666.67501.peg.956 CDS gi|393401708|dbj|AP012284.1| 962542 962165 -1 - 378 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Transcription repair cluster
fig|6666666.67501.peg.957 CDS gi|393401708|dbj|AP012284.1| 963039 962506 -3 - 534 FIG00544603: hypothetical protein - none -
fig|6666666.67501.peg.958 CDS gi|393401708|dbj|AP012284.1| 963749 963039 -2 - 711 FIG00544264: hypothetical protein - none -
fig|6666666.67501.peg.959 CDS gi|393401708|dbj|AP012284.1| 964121 966031 2 + 1911 GTP-binding protein TypA/BipA - none -
fig|6666666.67501.peg.960 CDS gi|393401708|dbj|AP012284.1| 966042 967598 3 + 1557 LpqW - none -
fig|6666666.67501.peg.961 CDS gi|393401708|dbj|AP012284.1| 967598 968482 2 + 885 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67501.peg.962 CDS gi|393401708|dbj|AP012284.1| 968487 968888 3 + 402 hypothetical membrane protein - none -
fig|6666666.67501.peg.963 CDS gi|393401708|dbj|AP012284.1| 968937 969254 3 + 318 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.67501.peg.964 CDS gi|393401708|dbj|AP012284.1| 969277 970371 1 + 1095 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.965 CDS gi|393401708|dbj|AP012284.1| 970584 971141 3 + 558 FIG00544080: hypothetical protein - none -
fig|6666666.67501.peg.966 CDS gi|393401708|dbj|AP012284.1| 972315 971143 -3 - 1173 hypothetical protein - none -
fig|6666666.67501.peg.967 CDS gi|393401708|dbj|AP012284.1| 973802 972393 -2 - 1410 Phenylalanine-specific permease - none -
fig|6666666.67501.peg.968 CDS gi|393401708|dbj|AP012284.1| 974870 973896 -2 - 975 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.969 CDS gi|393401708|dbj|AP012284.1| 976245 974881 -3 - 1365 Phenylalanine-specific permease - none -
fig|6666666.67501.peg.970 CDS gi|393401708|dbj|AP012284.1| 977265 976330 -3 - 936 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.971 CDS gi|393401708|dbj|AP012284.1| 977327 978400 2 + 1074 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.972 CDS gi|393401708|dbj|AP012284.1| 978409 979200 1 + 792 FIG01121566: hypothetical protein - none -
fig|6666666.67501.peg.973 CDS gi|393401708|dbj|AP012284.1| 979193 980050 2 + 858 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.67501.peg.974 CDS gi|393401708|dbj|AP012284.1| 980047 980781 1 + 735 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.67501.peg.975 CDS gi|393401708|dbj|AP012284.1| 980810 981097 2 + 288 hypothetical protein - none -
fig|6666666.67501.peg.976 CDS gi|393401708|dbj|AP012284.1| 981176 981343 2 + 168 FIG00545868: hypothetical protein - none -
fig|6666666.67501.peg.977 CDS gi|393401708|dbj|AP012284.1| 981373 982239 1 + 867 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67501.peg.978 CDS gi|393401708|dbj|AP012284.1| 983765 982314 -2 - 1452 levanase/invertase - none -
fig|6666666.67501.peg.979 CDS gi|393401708|dbj|AP012284.1| 984460 983777 -1 - 684 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.67501.peg.980 CDS gi|393401708|dbj|AP012284.1| 985726 984566 -1 - 1161 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.67501.peg.981 CDS gi|393401708|dbj|AP012284.1| 985871 987058 2 + 1188 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.67501.peg.982 CDS gi|393401708|dbj|AP012284.1| 987740 987108 -2 - 633 FIG00945644: hypothetical protein - none -
fig|6666666.67501.peg.983 CDS gi|393401708|dbj|AP012284.1| 987926 988567 2 + 642 putative RNA polymerase sigma factor - none -
fig|6666666.67501.peg.984 CDS gi|393401708|dbj|AP012284.1| 988603 989034 1 + 432 hypothetical protein - none -
fig|6666666.67501.peg.985 CDS gi|393401708|dbj|AP012284.1| 989044 989478 1 + 435 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67501.peg.986 CDS gi|393401708|dbj|AP012284.1| 990617 989475 -2 - 1143 Mrp protein homolog - none -
fig|6666666.67501.peg.987 CDS gi|393401708|dbj|AP012284.1| 991222 990623 -1 - 600 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.67501.peg.988 CDS gi|393401708|dbj|AP012284.1| 992500 991226 -1 - 1275 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67501.peg.989 CDS gi|393401708|dbj|AP012284.1| 992681 993343 2 + 663 FIG00544048: hypothetical protein - none -
fig|6666666.67501.peg.990 CDS gi|393401708|dbj|AP012284.1| 997093 993407 -1 - 3687 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67501.peg.991 CDS gi|393401708|dbj|AP012284.1| 1000947 997255 -3 - 3693 FIG00543822: hypothetical protein - none -
fig|6666666.67501.peg.992 CDS gi|393401708|dbj|AP012284.1| 1001795 1000968 -2 - 828 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.67501.peg.993 CDS gi|393401708|dbj|AP012284.1| 1002792 1001977 -3 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67501.peg.994 CDS gi|393401708|dbj|AP012284.1| 1002791 1004410 2 + 1620 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67501.peg.995 CDS gi|393401708|dbj|AP012284.1| 1004407 1005201 1 + 795 FIG00548916: hypothetical protein - none -
fig|6666666.67501.peg.996 CDS gi|393401708|dbj|AP012284.1| 1005235 1006023 1 + 789 FIG00544678: hypothetical protein - none -
fig|6666666.67501.peg.997 CDS gi|393401708|dbj|AP012284.1| 1006324 1006073 -1 - 252 hypothetical protein - none -
fig|6666666.67501.peg.998 CDS gi|393401708|dbj|AP012284.1| 1006794 1006928 3 + 135 hypothetical protein - none -
fig|6666666.67501.peg.999 CDS gi|393401708|dbj|AP012284.1| 1006985 1007872 2 + 888 Putative aldose 1-epimerase - none -
fig|6666666.67501.peg.1000 CDS gi|393401708|dbj|AP012284.1| 1007912 1009570 2 + 1659 Predicted sodium-dependent galactose transporter - none -
fig|6666666.67501.peg.1001 CDS gi|393401708|dbj|AP012284.1| 1009603 1009911 1 + 309 FIG00547530: hypothetical protein - none -
fig|6666666.67501.peg.1002 CDS gi|393401708|dbj|AP012284.1| 1009911 1011026 3 + 1116 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.67501.peg.1003 CDS gi|393401708|dbj|AP012284.1| 1011027 1012250 3 + 1224 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67501.peg.1004 CDS gi|393401708|dbj|AP012284.1| 1012453 1014477 1 + 2025 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67501.peg.1005 CDS gi|393401708|dbj|AP012284.1| 1014565 1014984 1 + 420 hypothetical protein - none -
fig|6666666.67501.peg.1006 CDS gi|393401708|dbj|AP012284.1| 1015015 1015452 1 + 438 hypothetical protein - none -
fig|6666666.67501.peg.1007 CDS gi|393401708|dbj|AP012284.1| 1015983 1015513 -3 - 471 FIG00544250: hypothetical protein - none -
fig|6666666.67501.peg.1008 CDS gi|393401708|dbj|AP012284.1| 1016611 1016024 -1 - 588 FIG00544279: hypothetical protein - none -
fig|6666666.67501.peg.1009 CDS gi|393401708|dbj|AP012284.1| 1018217 1016646 -2 - 1572 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.67501.peg.1010 CDS gi|393401708|dbj|AP012284.1| 1018350 1021379 3 + 3030 Helicase, SNF2/RAD54 family - none -
fig|6666666.67501.peg.1011 CDS gi|393401708|dbj|AP012284.1| 1021381 1022166 1 + 786 FIG00545674: hypothetical protein - none -
fig|6666666.67501.peg.1012 CDS gi|393401708|dbj|AP012284.1| 1022215 1023333 1 + 1119 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67501.peg.1013 CDS gi|393401708|dbj|AP012284.1| 1023340 1025913 1 + 2574 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67501.peg.1014 CDS gi|393401708|dbj|AP012284.1| 1026547 1025963 -1 - 585 Protein yceI precursor - none -
fig|6666666.67501.peg.1015 CDS gi|393401708|dbj|AP012284.1| 1026989 1027165 2 + 177 Transcriptional regulator, MarR family - none -
fig|6666666.67501.peg.1016 CDS gi|393401708|dbj|AP012284.1| 1027269 1027466 3 + 198 hypothetical protein - none -
fig|6666666.67501.peg.1017 CDS gi|393401708|dbj|AP012284.1| 1027878 1027519 -3 - 360 hypothetical protein - none -
fig|6666666.67501.peg.1018 CDS gi|393401708|dbj|AP012284.1| 1028041 1028772 1 + 732 transcriptional regulator, DeoR family - none -
fig|6666666.67501.peg.1019 CDS gi|393401708|dbj|AP012284.1| 1029092 1028787 -2 - 306 hypothetical protein - none -
fig|6666666.67501.peg.1020 CDS gi|393401708|dbj|AP012284.1| 1029220 1029342 1 + 123 hypothetical protein - none -
fig|6666666.67501.peg.1021 CDS gi|393401708|dbj|AP012284.1| 1029475 1029618 1 + 144 hypothetical protein - none -
fig|6666666.67501.peg.1022 CDS gi|393401708|dbj|AP012284.1| 1030657 1030028 -1 - 630 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.67501.peg.1023 CDS gi|393401708|dbj|AP012284.1| 1032204 1030660 -3 - 1545 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.67501.peg.1024 CDS gi|393401708|dbj|AP012284.1| 1032986 1032201 -2 - 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.67501.peg.1025 CDS gi|393401708|dbj|AP012284.1| 1033398 1035050 3 + 1653 L-lactate permease Lactate utilization
fig|6666666.67501.peg.1026 CDS gi|393401708|dbj|AP012284.1| 1035062 1036714 2 + 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67501.peg.1027 CDS gi|393401708|dbj|AP012284.1| 1036717 1038048 1 + 1332 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.1028 CDS gi|393401708|dbj|AP012284.1| 1038350 1039699 2 + 1350 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67501.peg.1029 CDS gi|393401708|dbj|AP012284.1| 1039709 1040632 2 + 924 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67501.peg.1030 CDS gi|393401708|dbj|AP012284.1| 1041288 1040629 -3 - 660 FIG00544995: hypothetical protein - none -
fig|6666666.67501.peg.1031 CDS gi|393401708|dbj|AP012284.1| 1043244 1041508 -3 - 1737 acyl-CoA synthetase - none -
fig|6666666.67501.peg.1032 CDS gi|393401708|dbj|AP012284.1| 1043610 1045763 3 + 2154 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67501.peg.1033 CDS gi|393401708|dbj|AP012284.1| 1045763 1046833 2 + 1071 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.67501.peg.1034 CDS gi|393401708|dbj|AP012284.1| 1046843 1047661 2 + 819 Methylase of polypeptide chain release factors - none -
fig|6666666.67501.peg.1035 CDS gi|393401708|dbj|AP012284.1| 1047734 1048384 2 + 651 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67501.peg.1036 CDS gi|393401708|dbj|AP012284.1| 1048385 1049539 2 + 1155 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67501.peg.1037 CDS gi|393401708|dbj|AP012284.1| 1049673 1050107 3 + 435 ATP synthase protein I - none -
fig|6666666.67501.peg.1038 CDS gi|393401708|dbj|AP012284.1| 1050589 1050729 1 + 141 hypothetical protein - none -
fig|6666666.67501.peg.1039 CDS gi|393401708|dbj|AP012284.1| 1050719 1051504 2 + 786 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1040 CDS gi|393401708|dbj|AP012284.1| 1051594 1051833 1 + 240 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1041 CDS gi|393401708|dbj|AP012284.1| 1051867 1052433 1 + 567 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1042 CDS gi|393401708|dbj|AP012284.1| 1052439 1053260 3 + 822 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1043 CDS gi|393401708|dbj|AP012284.1| 1053322 1054950 1 + 1629 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1044 CDS gi|393401708|dbj|AP012284.1| 1055006 1055986 2 + 981 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1045 CDS gi|393401708|dbj|AP012284.1| 1055990 1057435 2 + 1446 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1046 CDS gi|393401708|dbj|AP012284.1| 1057449 1057820 3 + 372 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67501.peg.1047 CDS gi|393401708|dbj|AP012284.1| 1058199 1058516 3 + 318 FIG00544079: hypothetical protein - none -
fig|6666666.67501.peg.1048 CDS gi|393401708|dbj|AP012284.1| 1058637 1059218 3 + 582 FIG00996186: hypothetical protein - none -
fig|6666666.67501.peg.1049 CDS gi|393401708|dbj|AP012284.1| 1060013 1059555 -2 - 459 Methylmalonyl-CoA epimerase (EC 5.1.99.1); Ethylmalonyl-CoA epimerase - none -
fig|6666666.67501.peg.1050 CDS gi|393401708|dbj|AP012284.1| 1060147 1060464 1 + 318 FIG00544011: hypothetical protein - none -
fig|6666666.67501.peg.1051 CDS gi|393401708|dbj|AP012284.1| 1060568 1061461 2 + 894 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67501.peg.1052 CDS gi|393401708|dbj|AP012284.1| 1063720 1061522 -1 - 2199 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67501.peg.1053 CDS gi|393401708|dbj|AP012284.1| 1065765 1063750 -3 - 2016 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.67501.peg.1054 CDS gi|393401708|dbj|AP012284.1| 1065860 1066708 2 + 849 ABC transporter, ATP-binding protein - none -
fig|6666666.67501.peg.1055 CDS gi|393401708|dbj|AP012284.1| 1066810 1067616 1 + 807 FIG00996530: hypothetical protein - none -
fig|6666666.67501.peg.1056 CDS gi|393401708|dbj|AP012284.1| 1067634 1068845 3 + 1212 SAM-dependent methyltransferase - none -
fig|6666666.67501.peg.1057 CDS gi|393401708|dbj|AP012284.1| 1068963 1069757 3 + 795 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.67501.peg.1058 CDS gi|393401708|dbj|AP012284.1| 1069778 1070734 2 + 957 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.67501.peg.1059 CDS gi|393401708|dbj|AP012284.1| 1070855 1071982 2 + 1128 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67501.peg.1060 CDS gi|393401708|dbj|AP012284.1| 1072848 1071979 -3 - 870 Spermidine synthase-like protein - none -
fig|6666666.67501.peg.1061 CDS gi|393401708|dbj|AP012284.1| 1072967 1074091 2 + 1125 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67501.peg.1062 CDS gi|393401708|dbj|AP012284.1| 1074109 1075080 1 + 972 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67501.peg.1063 CDS gi|393401708|dbj|AP012284.1| 1075802 1075104 -2 - 699 FIG00544413: hypothetical protein - none -
fig|6666666.67501.peg.1064 CDS gi|393401708|dbj|AP012284.1| 1075860 1077959 3 + 2100 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67501.peg.1065 CDS gi|393401708|dbj|AP012284.1| 1078668 1078006 -3 - 663 FIG01000629: hypothetical protein - none -
fig|6666666.67501.peg.1066 CDS gi|393401708|dbj|AP012284.1| 1079068 1079361 1 + 294 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67501.peg.1067 CDS gi|393401708|dbj|AP012284.1| 1079367 1080851 3 + 1485 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67501.peg.1068 CDS gi|393401708|dbj|AP012284.1| 1081463 1080969 -2 - 495 Putative acetyltransferase - none -
fig|6666666.67501.peg.1069 CDS gi|393401708|dbj|AP012284.1| 1081689 1083137 3 + 1449 permease of the major facilitator superfamily - none -
fig|6666666.67501.peg.1070 CDS gi|393401708|dbj|AP012284.1| 1083488 1083168 -2 - 321 Conserved putative integral membrane protein - none -
fig|6666666.67501.peg.1071 CDS gi|393401708|dbj|AP012284.1| 1083862 1084908 1 + 1047 ABC transporter (iron.B12.siderophore.hemin) , permease component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67501.peg.1072 CDS gi|393401708|dbj|AP012284.1| 1085153 1085677 2 + 525 Putative iron ABC transport system, ATP-binding protein - none -
fig|6666666.67501.peg.1073 CDS gi|393401708|dbj|AP012284.1| 1085707 1086774 1 + 1068 Putative iron transport system exported solute-binding component - none -
fig|6666666.67501.peg.1074 CDS gi|393401708|dbj|AP012284.1| 1086967 1087470 1 + 504 hypothetical protein - none -
fig|6666666.67501.peg.1075 CDS gi|393401708|dbj|AP012284.1| 1087691 1087834 2 + 144 hypothetical protein - none -
fig|6666666.67501.peg.1076 CDS gi|393401708|dbj|AP012284.1| 1087978 1089006 1 + 1029 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.1077 CDS gi|393401708|dbj|AP012284.1| 1088969 1089157 2 + 189 hypothetical protein - none -
fig|6666666.67501.peg.1078 CDS gi|393401708|dbj|AP012284.1| 1089169 1090674 1 + 1506 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67501.peg.1079 CDS gi|393401708|dbj|AP012284.1| 1090855 1091970 1 + 1116 Putative aldo/keto-reductase family protein - none -
fig|6666666.67501.peg.1080 CDS gi|393401708|dbj|AP012284.1| 1092752 1092018 -2 - 735 lysine exporter protein - none -
fig|6666666.67501.peg.1081 CDS gi|393401708|dbj|AP012284.1| 1092823 1093713 1 + 891 lysine export regulator protein - none -
fig|6666666.67501.peg.1082 CDS gi|393401708|dbj|AP012284.1| 1094863 1093721 -1 - 1143 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67501.peg.1083 CDS gi|393401708|dbj|AP012284.1| 1094971 1095792 1 + 822 hypothetical protein - none -
fig|6666666.67501.peg.1084 CDS gi|393401708|dbj|AP012284.1| 1095882 1097390 3 + 1509 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67501.peg.1085 CDS gi|393401708|dbj|AP012284.1| 1099300 1097459 -1 - 1842 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67501.peg.1086 CDS gi|393401708|dbj|AP012284.1| 1100066 1099515 -2 - 552 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67501.peg.1087 CDS gi|393401708|dbj|AP012284.1| 1101812 1100118 -2 - 1695 FIG00544780: hypothetical protein - none -
fig|6666666.67501.peg.1088 CDS gi|393401708|dbj|AP012284.1| 1102240 1104171 1 + 1932 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67501.peg.1089 CDS gi|393401708|dbj|AP012284.1| 1104181 1104699 1 + 519 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67501.peg.1090 CDS gi|393401708|dbj|AP012284.1| 1104839 1105852 2 + 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67501.peg.1091 CDS gi|393401708|dbj|AP012284.1| 1106653 1105931 -1 - 723 Putative membrane-anchored protein - none -
fig|6666666.67501.peg.1092 CDS gi|393401708|dbj|AP012284.1| 1106823 1107818 3 + 996 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67501.peg.1093 CDS gi|393401708|dbj|AP012284.1| 1107940 1109754 1 + 1815 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.67501.peg.1094 CDS gi|393401708|dbj|AP012284.1| 1109814 1111370 3 + 1557 hypothetical protein - none -
fig|6666666.67501.peg.1095 CDS gi|393401708|dbj|AP012284.1| 1111525 1113120 1 + 1596 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67501.peg.1096 CDS gi|393401708|dbj|AP012284.1| 1113344 1114363 2 + 1020 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67501.peg.1097 CDS gi|393401708|dbj|AP012284.1| 1114473 1116353 3 + 1881 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67501.peg.1098 CDS gi|393401708|dbj|AP012284.1| 1116353 1116964 2 + 612 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67501.peg.1099 CDS gi|393401708|dbj|AP012284.1| 1117027 1117365 1 + 339 Putative integral membrane protein - none -
fig|6666666.67501.peg.1100 CDS gi|393401708|dbj|AP012284.1| 1117466 1118281 2 + 816 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67501.peg.1101 CDS gi|393401708|dbj|AP012284.1| 1118342 1119010 2 + 669 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.67501.peg.1102 CDS gi|393401708|dbj|AP012284.1| 1120135 1119017 -1 - 1119 Isochorismate synthase (EC 5.4.4.2) of siderophore biosynthesis Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67501.peg.1103 CDS gi|393401708|dbj|AP012284.1| 1120165 1121652 1 + 1488 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67501.peg.1104 CDS gi|393401708|dbj|AP012284.1| 1122034 1123056 1 + 1023 FIG00549071: hypothetical protein - none -
fig|6666666.67501.peg.1105 CDS gi|393401708|dbj|AP012284.1| 1123488 1123604 3 + 117 hypothetical protein - none -
fig|6666666.67501.peg.1106 CDS gi|393401708|dbj|AP012284.1| 1123589 1124998 2 + 1410 Conserved hypothetical exported protein - none -
fig|6666666.67501.peg.1107 CDS gi|393401708|dbj|AP012284.1| 1126308 1126165 -3 - 144 hypothetical protein - none -
fig|6666666.67501.peg.1108 CDS gi|393401708|dbj|AP012284.1| 1126260 1127828 3 + 1569 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67501.peg.1109 CDS gi|393401708|dbj|AP012284.1| 1127975 1129072 2 + 1098 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67501.peg.1110 CDS gi|393401708|dbj|AP012284.1| 1129069 1132173 1 + 3105 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67501.peg.1111 CDS gi|393401708|dbj|AP012284.1| 1132176 1134857 3 + 2682 hypothetical protein - none -
fig|6666666.67501.peg.1112 CDS gi|393401708|dbj|AP012284.1| 1135089 1136012 3 + 924 Transporter - none -
fig|6666666.67501.peg.1113 CDS gi|393401708|dbj|AP012284.1| 1136262 1137002 3 + 741 hypothetical protein - none -
fig|6666666.67501.peg.1114 CDS gi|393401708|dbj|AP012284.1| 1137067 1138029 1 + 963 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67501.peg.1115 CDS gi|393401708|dbj|AP012284.1| 1138032 1138853 3 + 822 peptide ABC transporter, permease protein - none -
fig|6666666.67501.peg.1116 CDS gi|393401708|dbj|AP012284.1| 1138897 1139490 1 + 594 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67501.peg.1117 CDS gi|393401708|dbj|AP012284.1| 1139487 1140215 3 + 729 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67501.peg.1118 CDS gi|393401708|dbj|AP012284.1| 1140360 1141844 3 + 1485 peptide ABC transporter, periplasmic peptide-binding protein - none -
fig|6666666.67501.peg.1119 CDS gi|393401708|dbj|AP012284.1| 1143045 1142041 -3 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67501.peg.1120 CDS gi|393401708|dbj|AP012284.1| 1143141 1143716 3 + 576 FIG00547295: hypothetical protein - none -
fig|6666666.67501.peg.1121 CDS gi|393401708|dbj|AP012284.1| 1144436 1143711 -2 - 726 Transcriptional regulator, IclR family - none -
fig|6666666.67501.peg.1122 CDS gi|393401708|dbj|AP012284.1| 1144514 1145962 2 + 1449 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67501.peg.1123 CDS gi|393401708|dbj|AP012284.1| 1145969 1146559 2 + 591 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67501.peg.1124 CDS gi|393401708|dbj|AP012284.1| 1147569 1146568 -3 - 1002 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67501.peg.1125 CDS gi|393401708|dbj|AP012284.1| 1147937 1148932 2 + 996 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.1126 CDS gi|393401708|dbj|AP012284.1| 1148950 1150038 1 + 1089 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67501.peg.1127 CDS gi|393401708|dbj|AP012284.1| 1151085 1150117 -3 - 969 Putative exported protein - none -
fig|6666666.67501.peg.1128 CDS gi|393401708|dbj|AP012284.1| 1151202 1152182 3 + 981 Thiamine-monophosphate kinase (EC 2.7.4.16) Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67501.peg.1129 CDS gi|393401708|dbj|AP012284.1| 1152235 1152954 1 + 720 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67501.peg.1130 CDS gi|393401708|dbj|AP012284.1| 1152966 1154678 3 + 1713 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.1131 CDS gi|393401708|dbj|AP012284.1| 1154682 1156796 3 + 2115 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67501.peg.1132 CDS gi|393401708|dbj|AP012284.1| 1156875 1157087 3 + 213 Pyruvate carboxylase, C-terminal domain/subunit (EC 2.1.3.1) - none -
fig|6666666.67501.peg.1133 CDS gi|393401708|dbj|AP012284.1| 1157088 1157666 3 + 579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.67501.peg.1134 CDS gi|393401708|dbj|AP012284.1| 1157724 1158212 3 + 489 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.67501.peg.1135 CDS gi|393401708|dbj|AP012284.1| 1158311 1159054 2 + 744 FIG00543922: hypothetical protein - none -
fig|6666666.67501.peg.1136 CDS gi|393401708|dbj|AP012284.1| 1159078 1159896 1 + 819 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.67501.peg.1137 CDS gi|393401708|dbj|AP012284.1| 1160725 1159958 -1 - 768 ATP-binding protein - none -
fig|6666666.67501.peg.1138 CDS gi|393401708|dbj|AP012284.1| 1161684 1160728 -3 - 957 putative amino acid ABC transporter permease protein - none -
fig|6666666.67501.peg.1139 CDS gi|393401708|dbj|AP012284.1| 1162629 1161730 -3 - 900 Putative secreted protein - none -
fig|6666666.67501.peg.1140 CDS gi|393401708|dbj|AP012284.1| 1163726 1162785 -2 - 942 Putative membrane protein - none -
fig|6666666.67501.peg.1141 CDS gi|393401708|dbj|AP012284.1| 1163988 1163812 -3 - 177 hypothetical protein - none -
fig|6666666.67501.peg.1142 CDS gi|393401708|dbj|AP012284.1| 1166731 1164095 -1 - 2637 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67501.peg.1143 CDS gi|393401708|dbj|AP012284.1| 1168010 1167222 -2 - 789 SAM-dependent methyltransferases - none -
fig|6666666.67501.peg.1144 CDS gi|393401708|dbj|AP012284.1| 1168251 1169714 3 + 1464 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.67501.peg.1145 CDS gi|393401708|dbj|AP012284.1| 1170047 1170175 2 + 129 hypothetical protein - none -
fig|6666666.67501.peg.1146 CDS gi|393401708|dbj|AP012284.1| 1170943 1172955 1 + 2013 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.67501.peg.1147 CDS gi|393401708|dbj|AP012284.1| 1173057 1173671 3 + 615 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67501.peg.1148 CDS gi|393401708|dbj|AP012284.1| 1173817 1175055 1 + 1239 Radical SAM domain heme biosynthesis protein - none -
fig|6666666.67501.peg.1149 CDS gi|393401708|dbj|AP012284.1| 1175100 1177199 3 + 2100 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67501.peg.1150 CDS gi|393401708|dbj|AP012284.1| 1177570 1178010 1 + 441 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67501.peg.1151 CDS gi|393401708|dbj|AP012284.1| 1180410 1178077 -3 - 2334 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67501.peg.1152 CDS gi|393401708|dbj|AP012284.1| 1181465 1180620 -2 - 846 FIG00995839: hypothetical protein - none -
fig|6666666.67501.peg.1153 CDS gi|393401708|dbj|AP012284.1| 1182323 1181718 -2 - 606 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67501.peg.1154 CDS gi|393401708|dbj|AP012284.1| 1182608 1185472 2 + 2865 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67501.peg.1155 CDS gi|393401708|dbj|AP012284.1| 1185876 1186322 3 + 447 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67501.peg.1156 CDS gi|393401708|dbj|AP012284.1| 1186355 1186549 2 + 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67501.peg.1157 CDS gi|393401708|dbj|AP012284.1| 1186612 1186995 1 + 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67501.peg.1158 CDS gi|393401708|dbj|AP012284.1| 1187717 1187175 -2 - 543 hypothetical protein - none -
fig|6666666.67501.peg.1159 CDS gi|393401708|dbj|AP012284.1| 1187910 1188734 3 + 825 FIG011178: rRNA methylase RNA methylation
fig|6666666.67501.peg.1160 CDS gi|393401708|dbj|AP012284.1| 1188903 1189958 3 + 1056 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67501.peg.1161 CDS gi|393401708|dbj|AP012284.1| 1190009 1192519 2 + 2511 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67501.peg.1162 CDS gi|393401708|dbj|AP012284.1| 1192660 1193703 1 + 1044 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67501.peg.1163 CDS gi|393401708|dbj|AP012284.1| 1193755 1194915 1 + 1161 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67501.peg.1164 CDS gi|393401708|dbj|AP012284.1| 1194982 1195917 1 + 936 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67501.peg.1165 CDS gi|393401708|dbj|AP012284.1| 1195914 1197167 3 + 1254 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67501.peg.1166 CDS gi|393401708|dbj|AP012284.1| 1197185 1198195 2 + 1011 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67501.peg.1167 CDS gi|393401708|dbj|AP012284.1| 1198280 1198771 2 + 492 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67501.peg.1168 CDS gi|393401708|dbj|AP012284.1| 1199049 1200248 3 + 1200 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67501.peg.1169 CDS gi|393401708|dbj|AP012284.1| 1200250 1201683 1 + 1434 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67501.peg.1170 CDS gi|393401708|dbj|AP012284.1| 1201802 1201987 2 + 186 UPF0434 protein YcaR - none -
fig|6666666.67501.peg.1171 CDS gi|393401708|dbj|AP012284.1| 1202035 1203315 1 + 1281 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67501.peg.1172 CDS gi|393401708|dbj|AP012284.1| 1203923 1204063 2 + 141 hypothetical protein - none -
fig|6666666.67501.peg.1174 CDS gi|393401708|dbj|AP012284.1| 1209470 1210687 2 + 1218 TPR-repeat-containing protein - none -
fig|6666666.67501.peg.1175 CDS gi|393401708|dbj|AP012284.1| 1210732 1211715 1 + 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67501.peg.1176 CDS gi|393401708|dbj|AP012284.1| 1211722 1211883 1 + 162 hypothetical protein - none -
fig|6666666.67501.peg.1177 CDS gi|393401708|dbj|AP012284.1| 1211912 1212733 2 + 822 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67501.peg.1178 CDS gi|393401708|dbj|AP012284.1| 1212730 1213689 1 + 960 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67501.peg.1179 CDS gi|393401708|dbj|AP012284.1| 1213756 1215495 1 + 1740 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67501.peg.1180 CDS gi|393401708|dbj|AP012284.1| 1215582 1215469 -3 - 114 hypothetical protein - none -
fig|6666666.67501.peg.1181 CDS gi|393401708|dbj|AP012284.1| 1215589 1216782 1 + 1194 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67501.peg.1182 CDS gi|393401708|dbj|AP012284.1| 1216804 1217757 1 + 954 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67501.peg.1183 CDS gi|393401708|dbj|AP012284.1| 1217819 1218466 2 + 648 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67501.peg.1184 CDS gi|393401708|dbj|AP012284.1| 1218463 1219395 1 + 933 Tyrosine recombinase XerD - none -
fig|6666666.67501.peg.1185 CDS gi|393401708|dbj|AP012284.1| 1219624 1220493 1 + 870 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67501.peg.1186 CDS gi|393401708|dbj|AP012284.1| 1220504 1221322 2 + 819 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67501.peg.1187 CDS gi|393401708|dbj|AP012284.1| 1221470 1222075 2 + 606 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67501.peg.1188 CDS gi|393401708|dbj|AP012284.1| 1223624 1222128 -2 - 1497 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67501.peg.1189 CDS gi|393401708|dbj|AP012284.1| 1223778 1223662 -3 - 117 hypothetical protein - none -
fig|6666666.67501.peg.1190 CDS gi|393401708|dbj|AP012284.1| 1223724 1225022 3 + 1299 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67501.peg.1191 CDS gi|393401708|dbj|AP012284.1| 1225058 1225747 2 + 690 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67501.peg.1192 CDS gi|393401708|dbj|AP012284.1| 1225802 1226509 2 + 708 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67501.peg.1193 CDS gi|393401708|dbj|AP012284.1| 1226607 1227686 3 + 1080 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67501.peg.1194 CDS gi|393401708|dbj|AP012284.1| 1227693 1228412 3 + 720 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.67501.peg.1195 CDS gi|393401708|dbj|AP012284.1| 1228402 1230024 1 + 1623 GTP-binding protein EngA - none -
fig|6666666.67501.peg.1196 CDS gi|393401708|dbj|AP012284.1| 1230459 1230343 -3 - 117 hypothetical protein - none -
fig|6666666.67501.peg.1197 CDS gi|393401708|dbj|AP012284.1| 1230419 1231804 2 + 1386 Putative anaerobic c4-dicarboxylate transport protein - none -
fig|6666666.67501.peg.1198 CDS gi|393401708|dbj|AP012284.1| 1232742 1231897 -3 - 846 FIG00545160: hypothetical protein - none -
fig|6666666.67501.peg.1199 CDS gi|393401708|dbj|AP012284.1| 1233106 1234224 1 + 1119 hypothetical protein - none -
fig|6666666.67501.peg.1200 CDS gi|393401708|dbj|AP012284.1| 1234224 1236905 3 + 2682 hypothetical protein - none -
fig|6666666.67501.peg.1201 CDS gi|393401708|dbj|AP012284.1| 1237085 1237939 2 + 855 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.67501.peg.1202 CDS gi|393401708|dbj|AP012284.1| 1237996 1238964 1 + 969 Putative iron transport system membrane protein - none -
fig|6666666.67501.peg.1203 CDS gi|393401708|dbj|AP012284.1| 1238969 1240000 2 + 1032 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67501.peg.1204 CDS gi|393401708|dbj|AP012284.1| 1240000 1240821 1 + 822 Heme transporter analogous to IsdDEF, ATP-binding protein Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.1205 CDS gi|393401708|dbj|AP012284.1| 1240843 1244229 1 + 3387 FIG00545214: hypothetical protein - none -
fig|6666666.67501.peg.1206 CDS gi|393401708|dbj|AP012284.1| 1244237 1245526 2 + 1290 hypothetical protein - none -
fig|6666666.67501.peg.1207 CDS gi|393401708|dbj|AP012284.1| 1246070 1246303 2 + 234 hypothetical protein - none -
fig|6666666.67501.peg.1208 CDS gi|393401708|dbj|AP012284.1| 1247196 1246915 -3 - 282 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.67501.peg.1209 CDS gi|393401708|dbj|AP012284.1| 1247210 1247329 2 + 120 hypothetical protein - none -
fig|6666666.67501.peg.1210 CDS gi|393401708|dbj|AP012284.1| 1248461 1247319 -2 - 1143 hydrolase of the alpha/beta superfamily - none -
fig|6666666.67501.peg.1211 CDS gi|393401708|dbj|AP012284.1| 1248448 1248591 1 + 144 hypothetical protein - none -
fig|6666666.67501.peg.1212 CDS gi|393401708|dbj|AP012284.1| 1249011 1251308 3 + 2298 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67501.peg.1213 CDS gi|393401708|dbj|AP012284.1| 1251484 1251915 1 + 432 FIG00672531: hypothetical protein - none -
fig|6666666.67501.peg.1214 CDS gi|393401708|dbj|AP012284.1| 1252031 1252786 2 + 756 FIG01124490: hypothetical protein - none -
fig|6666666.67501.peg.1215 CDS gi|393401708|dbj|AP012284.1| 1252804 1253418 1 + 615 FIG00544095: hypothetical protein - none -
fig|6666666.67501.peg.1216 CDS gi|393401708|dbj|AP012284.1| 1253542 1254105 1 + 564 FIG01121957: hypothetical protein - none -
fig|6666666.67501.peg.1217 CDS gi|393401708|dbj|AP012284.1| 1255668 1254226 -3 - 1443 Putative secreted protein - none -
fig|6666666.67501.peg.1218 CDS gi|393401708|dbj|AP012284.1| 1256338 1255694 -1 - 645 FIG00545058: hypothetical protein - none -
fig|6666666.67501.peg.1219 CDS gi|393401708|dbj|AP012284.1| 1257635 1256583 -2 - 1053 FIG00546228: hypothetical protein - none -
fig|6666666.67501.peg.1220 CDS gi|393401708|dbj|AP012284.1| 1259035 1257635 -1 - 1401 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.67501.peg.1221 CDS gi|393401708|dbj|AP012284.1| 1260403 1259051 -1 - 1353 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67501.peg.1222 CDS gi|393401708|dbj|AP012284.1| 1262029 1260524 -1 - 1506 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67501.peg.1223 CDS gi|393401708|dbj|AP012284.1| 1262228 1262725 2 + 498 FIG00544657: hypothetical protein - none -
fig|6666666.67501.peg.1224 CDS gi|393401708|dbj|AP012284.1| 1263813 1262794 -3 - 1020 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.67501.peg.1225 CDS gi|393401708|dbj|AP012284.1| 1263928 1264497 1 + 570 FIG00544791: hypothetical protein - none -
fig|6666666.67501.peg.1226 CDS gi|393401708|dbj|AP012284.1| 1265359 1265643 1 + 285 ABC transporter, ATP-binding protein - none -
fig|6666666.67501.peg.1227 CDS gi|393401708|dbj|AP012284.1| 1265633 1266775 2 + 1143 Putative membrane protein - none -
fig|6666666.67501.peg.1228 CDS gi|393401708|dbj|AP012284.1| 1267068 1267373 3 + 306 Putative membrane protein - none -
fig|6666666.67501.peg.1229 CDS gi|393401708|dbj|AP012284.1| 1268812 1267454 -1 - 1359 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67501.peg.1230 CDS gi|393401708|dbj|AP012284.1| 1268985 1270292 3 + 1308 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67501.peg.1231 CDS gi|393401708|dbj|AP012284.1| 1271763 1270378 -3 - 1386 putative transport protein - none -
fig|6666666.67501.peg.1232 CDS gi|393401708|dbj|AP012284.1| 1274910 1271989 -3 - 2922 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67501.peg.1233 CDS gi|393401708|dbj|AP012284.1| 1275067 1276047 1 + 981 Sodium-dependent transporter - none -
fig|6666666.67501.peg.1234 CDS gi|393401708|dbj|AP012284.1| 1276716 1276531 -3 - 186 hypothetical protein - none -
fig|6666666.67501.peg.1235 CDS gi|393401708|dbj|AP012284.1| 1277435 1276743 -2 - 693 Putative secreted protein - none -
fig|6666666.67501.peg.1236 CDS gi|393401708|dbj|AP012284.1| 1277640 1277455 -3 - 186 hypothetical protein - none -
fig|6666666.67501.peg.1237 CDS gi|393401708|dbj|AP012284.1| 1277965 1278357 1 + 393 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67501.peg.1238 CDS gi|393401708|dbj|AP012284.1| 1279240 1278437 -1 - 804 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67501.peg.1239 CDS gi|393401708|dbj|AP012284.1| 1280830 1279274 -1 - 1557 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67501.peg.1240 CDS gi|393401708|dbj|AP012284.1| 1281521 1280991 -2 - 531 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67501.peg.1241 CDS gi|393401708|dbj|AP012284.1| 1285206 1281592 -3 - 3615 CobN component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67501.peg.1242 CDS gi|393401708|dbj|AP012284.1| 1285270 1285389 1 + 120 hypothetical protein - none -
fig|6666666.67501.peg.1243 CDS gi|393401708|dbj|AP012284.1| 1285763 1286863 2 + 1101 Cobalamin biosynthesis protein CobG - none -
fig|6666666.67501.peg.1244 CDS gi|393401708|dbj|AP012284.1| 1286860 1287510 1 + 651 Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis
fig|6666666.67501.peg.1245 CDS gi|393401708|dbj|AP012284.1| 1287507 1289015 3 + 1509 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) / Cobalt-precorrin-3b C17-methyltransferase Cobalamin synthesis;
Cobalamin synthesis
fig|6666666.67501.peg.1246 CDS gi|393401708|dbj|AP012284.1| 1289278 1290738 1 + 1461 putative gamma-aminobutyrate permease - none -
fig|6666666.67501.peg.1247 CDS gi|393401708|dbj|AP012284.1| 1291472 1290741 -2 - 732 Cobalt-precorrin-6x reductase (EC 1.3.1.54) Cobalamin synthesis
fig|6666666.67501.peg.1248 CDS gi|393401708|dbj|AP012284.1| 1292233 1291460 -1 - 774 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis
fig|6666666.67501.peg.1249 CDS gi|393401708|dbj|AP012284.1| 1293456 1292242 -3 - 1215 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.67501.peg.1250 CDS gi|393401708|dbj|AP012284.1| 1294340 1293567 -2 - 774 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67501.peg.1251 CDS gi|393401708|dbj|AP012284.1| 1295488 1294307 -1 - 1182 probable metallopeptidase - none -
fig|6666666.67501.peg.1252 CDS gi|393401708|dbj|AP012284.1| 1298245 1295489 -1 - 2757 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67501.peg.1253 CDS gi|393401708|dbj|AP012284.1| 1299352 1298264 -1 - 1089 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67501.peg.1254 CDS gi|393401708|dbj|AP012284.1| 1299744 1299460 -3 - 285 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67501.peg.1255 CDS gi|393401708|dbj|AP012284.1| 1300772 1299783 -2 - 990 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67501.peg.1256 CDS gi|393401708|dbj|AP012284.1| 1301761 1300772 -1 - 990 FIG005453: Putative DeoR-family transcriptional regulator Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67501.peg.1257 CDS gi|393401708|dbj|AP012284.1| 1303074 1301758 -3 - 1317 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67501.peg.1258 CDS gi|393401708|dbj|AP012284.1| 1303414 1303220 -1 - 195 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67501.peg.1259 CDS gi|393401708|dbj|AP012284.1| 1305048 1303516 -3 - 1533 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67501.peg.1260 CDS gi|393401708|dbj|AP012284.1| 1306625 1305045 -2 - 1581 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67501.peg.1261 CDS gi|393401708|dbj|AP012284.1| 1307651 1306815 -2 - 837 RNA methyltransferase - none -
fig|6666666.67501.peg.1262 CDS gi|393401708|dbj|AP012284.1| 1308998 1307658 -2 - 1341 aspartyl aminopeptidase - none -
fig|6666666.67501.peg.1263 CDS gi|393401708|dbj|AP012284.1| 1309066 1310022 1 + 957 RecB family exonuclease - none -
fig|6666666.67501.peg.1264 CDS gi|393401708|dbj|AP012284.1| 1310254 1310523 1 + 270 Putative virulence-associated protein - none -
fig|6666666.67501.peg.1265 CDS gi|393401708|dbj|AP012284.1| 1312229 1310580 -2 - 1650 Formate--tetrahydrofolate ligase (EC 6.3.4.3) One-carbon metabolism by tetrahydropterines
fig|6666666.67501.peg.1266 CDS gi|393401708|dbj|AP012284.1| 1313784 1312354 -3 - 1431 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67501.peg.1267 CDS gi|393401708|dbj|AP012284.1| 1315495 1314188 -1 - 1308 C4-dicarboxylate transporter DcuA - none -
fig|6666666.67501.peg.1268 CDS gi|393401708|dbj|AP012284.1| 1316775 1315930 -3 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67501.peg.1269 CDS gi|393401708|dbj|AP012284.1| 1317054 1316791 -3 - 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67501.peg.1270 CDS gi|393401708|dbj|AP012284.1| 1317766 1317083 -1 - 684 possible hydrolase - none -
fig|6666666.67501.peg.1271 CDS gi|393401708|dbj|AP012284.1| 1321454 1317855 -2 - 3600 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.67501.peg.1272 CDS gi|393401708|dbj|AP012284.1| 1321997 1321557 -2 - 441 hypothetical protein - none -
fig|6666666.67501.peg.1273 CDS gi|393401708|dbj|AP012284.1| 1323345 1322062 -3 - 1284 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67501.peg.1274 CDS gi|393401708|dbj|AP012284.1| 1324323 1323436 -3 - 888 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67501.peg.1275 CDS gi|393401708|dbj|AP012284.1| 1324390 1325253 1 + 864 putative oxidoreductase - none -
fig|6666666.67501.peg.1276 CDS gi|393401708|dbj|AP012284.1| 1325360 1326400 2 + 1041 FIG00545923: hypothetical protein - none -
fig|6666666.67501.peg.1277 CDS gi|393401708|dbj|AP012284.1| 1326508 1327554 1 + 1047 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67501.peg.1278 CDS gi|393401708|dbj|AP012284.1| 1327810 1327577 -1 - 234 hypothetical protein - none -
fig|6666666.67501.peg.1279 CDS gi|393401708|dbj|AP012284.1| 1328277 1328014 -3 - 264 FIG00543853: hypothetical protein - none -
fig|6666666.67501.peg.1280 CDS gi|393401708|dbj|AP012284.1| 1328938 1328402 -1 - 537 Phospholipid-binding protein - none -
fig|6666666.67501.peg.1281 CDS gi|393401708|dbj|AP012284.1| 1329732 1329055 -3 - 678 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component / DHA-specific phosphocarrier protein HPr Dihydroxyacetone kinases;
Dihydroxyacetone kinases;
Dihydroxyacetone kinases
fig|6666666.67501.peg.1282 CDS gi|393401708|dbj|AP012284.1| 1330376 1329729 -2 - 648 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL Dihydroxyacetone kinases
fig|6666666.67501.peg.1283 CDS gi|393401708|dbj|AP012284.1| 1331380 1330379 -1 - 1002 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK Dihydroxyacetone kinases
fig|6666666.67501.peg.1284 CDS gi|393401708|dbj|AP012284.1| 1332107 1333756 2 + 1650 ABC transporter, ATP-binding protein - none -
fig|6666666.67501.peg.1285 CDS gi|393401708|dbj|AP012284.1| 1333803 1334756 3 + 954 hypothetical protein - none -
fig|6666666.67501.peg.1286 CDS gi|393401708|dbj|AP012284.1| 1334776 1336248 1 + 1473 putative oxidoreductase - none -
fig|6666666.67501.peg.1287 CDS gi|393401708|dbj|AP012284.1| 1337361 1336258 -3 - 1104 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67501.peg.1288 CDS gi|393401708|dbj|AP012284.1| 1339645 1337438 -1 - 2208 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67501.peg.1289 CDS gi|393401708|dbj|AP012284.1| 1341462 1339651 -3 - 1812 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.67501.peg.1290 CDS gi|393401708|dbj|AP012284.1| 1341757 1342389 1 + 633 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.67501.peg.1291 CDS gi|393401708|dbj|AP012284.1| 1342478 1343050 2 + 573 FIG00545282: hypothetical protein - none -
fig|6666666.67501.peg.1292 CDS gi|393401708|dbj|AP012284.1| 1344331 1343120 -1 - 1212 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67501.peg.1293 CDS gi|393401708|dbj|AP012284.1| 1344760 1344332 -1 - 429 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.67501.peg.1294 CDS gi|393401708|dbj|AP012284.1| 1345425 1344811 -3 - 615 FIG01000060: hypothetical protein - none -
fig|6666666.67501.peg.1295 CDS gi|393401708|dbj|AP012284.1| 1345465 1346460 1 + 996 FIG00546138: hypothetical protein - none -
fig|6666666.67501.peg.1296 CDS gi|393401708|dbj|AP012284.1| 1347572 1346442 -2 - 1131 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.1297 CDS gi|393401708|dbj|AP012284.1| 1349458 1347716 -1 - 1743 cell wall-associated hydrolase - none -
fig|6666666.67501.peg.1298 CDS gi|393401708|dbj|AP012284.1| 1350496 1350032 -1 - 465 FIG00545300: hypothetical protein - none -
fig|6666666.67501.peg.1299 CDS gi|393401708|dbj|AP012284.1| 1350914 1353721 2 + 2808 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) TCA Cycle
fig|6666666.67501.peg.1300 CDS gi|393401708|dbj|AP012284.1| 1353818 1354396 2 + 579 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.1301 CDS gi|393401708|dbj|AP012284.1| 1354474 1355193 1 + 720 GMP synthase - none -
fig|6666666.67501.peg.1302 CDS gi|393401708|dbj|AP012284.1| 1355246 1355515 2 + 270 ACT domain protein - none -
fig|6666666.67501.peg.1303 CDS gi|393401708|dbj|AP012284.1| 1355537 1356901 2 + 1365 FIG00848225: hypothetical protein - none -
fig|6666666.67501.peg.1304 CDS gi|393401708|dbj|AP012284.1| 1357170 1356961 -3 - 210 hypothetical protein - none -
fig|6666666.67501.peg.1305 CDS gi|393401708|dbj|AP012284.1| 1357325 1358434 2 + 1110 hypothetical protein - none -
fig|6666666.67501.peg.1306 CDS gi|393401708|dbj|AP012284.1| 1358765 1360972 2 + 2208 hypothetical protein - none -
fig|6666666.67501.peg.1307 CDS gi|393401708|dbj|AP012284.1| 1361739 1361401 -3 - 339 Putative secreted protein - none -
fig|6666666.67501.peg.1308 CDS gi|393401708|dbj|AP012284.1| 1362137 1361736 -2 - 402 Putative membrane protein - none -
fig|6666666.67501.peg.1309 CDS gi|393401708|dbj|AP012284.1| 1362535 1362206 -1 - 330 Putative membrane protein - none -
fig|6666666.67501.peg.1310 CDS gi|393401708|dbj|AP012284.1| 1363305 1362535 -3 - 771 hypothetical protein - none -
fig|6666666.67501.peg.1311 CDS gi|393401708|dbj|AP012284.1| 1363652 1363353 -2 - 300 hypothetical protein - none -
fig|6666666.67501.peg.1312 CDS gi|393401708|dbj|AP012284.1| 1364543 1363656 -2 - 888 Putative phage tail fiber protein - none -
fig|6666666.67501.peg.1313 CDS gi|393401708|dbj|AP012284.1| 1365693 1364572 -3 - 1122 hypothetical protein - none -
fig|6666666.67501.peg.1314 CDS gi|393401708|dbj|AP012284.1| 1366538 1365690 -2 - 849 immunity-specific protein Beta286 - none -
fig|6666666.67501.peg.1315 CDS gi|393401708|dbj|AP012284.1| 1367243 1366545 -2 - 699 immunity-specific protein Beta201 - none -
fig|6666666.67501.peg.1316 CDS gi|393401708|dbj|AP012284.1| 1372971 1367359 -3 - 5613 hypothetical protein - none -
fig|6666666.67501.peg.1317 CDS gi|393401708|dbj|AP012284.1| 1373306 1372983 -2 - 324 hypothetical protein - none -
fig|6666666.67501.peg.1318 CDS gi|393401708|dbj|AP012284.1| 1373641 1373348 -1 - 294 hypothetical protein - none -
fig|6666666.67501.peg.1319 CDS gi|393401708|dbj|AP012284.1| 1374640 1373744 -1 - 897 Putative phage protein - none -
fig|6666666.67501.peg.1320 CDS gi|393401708|dbj|AP012284.1| 1375319 1375029 -2 - 291 hypothetical protein - none -
fig|6666666.67501.peg.1321 CDS gi|393401708|dbj|AP012284.1| 1375651 1375319 -1 - 333 hypothetical protein - none -
fig|6666666.67501.peg.1322 CDS gi|393401708|dbj|AP012284.1| 1376076 1375651 -3 - 426 hypothetical protein - none -
fig|6666666.67501.peg.1323 CDS gi|393401708|dbj|AP012284.1| 1376445 1376092 -3 - 354 hypothetical protein - none -
fig|6666666.67501.peg.1324 CDS gi|393401708|dbj|AP012284.1| 1377378 1376455 -3 - 924 Phage protein - none -
fig|6666666.67501.peg.1325 CDS gi|393401708|dbj|AP012284.1| 1377782 1377393 -2 - 390 hypothetical protein - none -
fig|6666666.67501.peg.1326 CDS gi|393401708|dbj|AP012284.1| 1379188 1377794 -1 - 1395 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.67501.peg.1327 CDS gi|393401708|dbj|AP012284.1| 1380555 1379185 -3 - 1371 Phage protein - none -
fig|6666666.67501.peg.1328 CDS gi|393401708|dbj|AP012284.1| 1382126 1380567 -2 - 1560 Phage terminase Phage packaging machinery
fig|6666666.67501.peg.1329 CDS gi|393401708|dbj|AP012284.1| 1382473 1382150 -1 - 324 hypothetical protein - none -
fig|6666666.67501.peg.1330 CDS gi|393401708|dbj|AP012284.1| 1383377 1382625 -2 - 753 hypothetical protein - none -
fig|6666666.67501.peg.1331 CDS gi|393401708|dbj|AP012284.1| 1383591 1383454 -3 - 138 hypothetical protein - none -
fig|6666666.67501.peg.1332 CDS gi|393401708|dbj|AP012284.1| 1384958 1383948 -2 - 1011 hypothetical protein - none -
fig|6666666.67501.peg.1333 CDS gi|393401708|dbj|AP012284.1| 1385733 1385146 -3 - 588 hypothetical protein - none -
fig|6666666.67501.peg.1334 CDS gi|393401708|dbj|AP012284.1| 1386389 1385883 -2 - 507 hypothetical protein - none -
fig|6666666.67501.peg.1335 CDS gi|393401708|dbj|AP012284.1| 1387741 1386386 -1 - 1356 DNA helicase, phage-associated Phage replication
fig|6666666.67501.peg.1336 CDS gi|393401708|dbj|AP012284.1| 1388003 1387722 -2 - 282 Phage protein - none -
fig|6666666.67501.peg.1337 CDS gi|393401708|dbj|AP012284.1| 1390775 1388316 -2 - 2460 DNA primase, phage associated - none -
fig|6666666.67501.peg.1338 CDS gi|393401708|dbj|AP012284.1| 1392780 1390795 -3 - 1986 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67501.peg.1339 CDS gi|393401708|dbj|AP012284.1| 1393487 1392870 -2 - 618 Phage protein - none -
fig|6666666.67501.peg.1340 CDS gi|393401708|dbj|AP012284.1| 1395100 1393619 -1 - 1482 Phage protein - none -
fig|6666666.67501.peg.1341 CDS gi|393401708|dbj|AP012284.1| 1395540 1395100 -3 - 441 hypothetical protein - none -
fig|6666666.67501.peg.1342 CDS gi|393401708|dbj|AP012284.1| 1395962 1395729 -2 - 234 hypothetical protein - none -
fig|6666666.67501.peg.1343 CDS gi|393401708|dbj|AP012284.1| 1396059 1396724 3 + 666 hypothetical protein - none -
fig|6666666.67501.peg.1344 CDS gi|393401708|dbj|AP012284.1| 1396884 1396714 -3 - 171 hypothetical protein - none -
fig|6666666.67501.peg.1345 CDS gi|393401708|dbj|AP012284.1| 1397591 1397343 -2 - 249 hypothetical protein - none -
fig|6666666.67501.peg.1346 CDS gi|393401708|dbj|AP012284.1| 1397756 1398001 2 + 246 hypothetical protein - none -
fig|6666666.67501.peg.1347 CDS gi|393401708|dbj|AP012284.1| 1398981 1398223 -3 - 759 Phage antirepressor protein #of cryptic prophage CP-933M - none -
fig|6666666.67501.peg.1348 CDS gi|393401708|dbj|AP012284.1| 1399442 1399939 2 + 498 hypothetical protein - none -
fig|6666666.67501.peg.1349 CDS gi|393401708|dbj|AP012284.1| 1400078 1400269 2 + 192 hypothetical protein - none -
fig|6666666.67501.peg.1350 CDS gi|393401708|dbj|AP012284.1| 1400347 1400649 1 + 303 hypothetical protein - none -
fig|6666666.67501.peg.1351 CDS gi|393401708|dbj|AP012284.1| 1400642 1401013 2 + 372 hypothetical protein - none -
fig|6666666.67501.peg.1352 CDS gi|393401708|dbj|AP012284.1| 1401185 1401045 -2 - 141 hypothetical protein - none -
fig|6666666.67501.peg.1353 CDS gi|393401708|dbj|AP012284.1| 1401209 1402390 2 + 1182 hypothetical protein - none -
fig|6666666.67501.peg.1354 CDS gi|393401708|dbj|AP012284.1| 1404054 1402423 -3 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.1355 CDS gi|393401708|dbj|AP012284.1| 1404644 1404165 -2 - 480 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67501.peg.1356 CDS gi|393401708|dbj|AP012284.1| 1405090 1404641 -1 - 450 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67501.peg.1357 CDS gi|393401708|dbj|AP012284.1| 1406376 1405087 -3 - 1290 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67501.peg.1358 CDS gi|393401708|dbj|AP012284.1| 1407131 1406373 -2 - 759 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67501.peg.1359 CDS gi|393401708|dbj|AP012284.1| 1407124 1407267 1 + 144 hypothetical protein - none -
fig|6666666.67501.peg.1360 CDS gi|393401708|dbj|AP012284.1| 1408426 1407245 -1 - 1182 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67501.peg.1361 CDS gi|393401708|dbj|AP012284.1| 1409886 1408432 -3 - 1455 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67501.peg.1362 CDS gi|393401708|dbj|AP012284.1| 1410680 1409883 -2 - 798 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67501.peg.1363 CDS gi|393401708|dbj|AP012284.1| 1411001 1412839 2 + 1839 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67501.peg.1364 CDS gi|393401708|dbj|AP012284.1| 1412927 1413814 2 + 888 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67501.peg.1365 CDS gi|393401708|dbj|AP012284.1| 1413816 1414616 3 + 801 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67501.peg.1366 CDS gi|393401708|dbj|AP012284.1| 1414689 1415711 3 + 1023 Cytochrome oxidase assembly protein - none -
fig|6666666.67501.peg.1367 CDS gi|393401708|dbj|AP012284.1| 1416784 1415852 -1 - 933 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67501.peg.1368 CDS gi|393401708|dbj|AP012284.1| 1417147 1419240 1 + 2094 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67501.peg.1369 CDS gi|393401708|dbj|AP012284.1| 1419355 1420437 1 + 1083 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.67501.peg.1370 CDS gi|393401708|dbj|AP012284.1| 1420599 1422206 3 + 1608 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67501.peg.1371 CDS gi|393401708|dbj|AP012284.1| 1422269 1423228 2 + 960 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67501.peg.1372 CDS gi|393401708|dbj|AP012284.1| 1423247 1423957 2 + 711 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67501.peg.1373 CDS gi|393401708|dbj|AP012284.1| 1424258 1424022 -2 - 237 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67501.peg.1374 CDS gi|393401708|dbj|AP012284.1| 1427186 1424367 -2 - 2820 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Fermentations: Mixed acid;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67501.peg.1375 CDS gi|393401708|dbj|AP012284.1| 1428081 1427302 -3 - 780 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.1376 CDS gi|393401708|dbj|AP012284.1| 1429466 1428195 -2 - 1272 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.1377 CDS gi|393401708|dbj|AP012284.1| 1430580 1429576 -3 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67501.peg.1378 CDS gi|393401708|dbj|AP012284.1| 1431955 1430966 -1 - 990 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.67501.peg.1379 CDS gi|393401708|dbj|AP012284.1| 1433095 1432067 -1 - 1029 Hypothetical protein UPF0052 - none -
fig|6666666.67501.peg.1380 CDS gi|393401708|dbj|AP012284.1| 1433972 1433109 -2 - 864 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.67501.peg.1381 CDS gi|393401708|dbj|AP012284.1| 1435517 1434096 -2 - 1422 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67501.peg.1382 CDS gi|393401708|dbj|AP012284.1| 1436698 1436132 -1 - 567 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67501.peg.1383 CDS gi|393401708|dbj|AP012284.1| 1437364 1436891 -1 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.67501.peg.1384 CDS gi|393401708|dbj|AP012284.1| 1438729 1437377 -1 - 1353 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67501.peg.1385 CDS gi|393401708|dbj|AP012284.1| 1439381 1438740 -2 - 642 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67501.peg.1386 CDS gi|393401708|dbj|AP012284.1| 1440605 1439520 -2 - 1086 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67501.peg.1387 CDS gi|393401708|dbj|AP012284.1| 1441269 1440595 -3 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67501.peg.1388 CDS gi|393401708|dbj|AP012284.1| 1442867 1441353 -2 - 1515 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.67501.peg.1389 CDS gi|393401708|dbj|AP012284.1| 1443805 1442864 -1 - 942 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67501.peg.1390 CDS gi|393401708|dbj|AP012284.1| 1444357 1443848 -1 - 510 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67501.peg.1391 CDS gi|393401708|dbj|AP012284.1| 1446530 1444485 -2 - 2046 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67501.peg.1392 CDS gi|393401708|dbj|AP012284.1| 1447826 1446597 -2 - 1230 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis
fig|6666666.67501.peg.1393 CDS gi|393401708|dbj|AP012284.1| 1449257 1448010 -2 - 1248 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67501.peg.1394 CDS gi|393401708|dbj|AP012284.1| 1449641 1449354 -2 - 288 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67501.peg.1395 CDS gi|393401708|dbj|AP012284.1| 1450329 1449754 -3 - 576 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67501.peg.1396 CDS gi|393401708|dbj|AP012284.1| 1450656 1450333 -3 - 324 integration host factor - none -
fig|6666666.67501.peg.1397 CDS gi|393401708|dbj|AP012284.1| 1451848 1451009 -1 - 840 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67501.peg.1398 CDS gi|393401708|dbj|AP012284.1| 1455217 1451855 -1 - 3363 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67501.peg.1399 CDS gi|393401708|dbj|AP012284.1| 1456471 1455239 -1 - 1233 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67501.peg.1400 CDS gi|393401708|dbj|AP012284.1| 1457932 1456574 -1 - 1359 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis;
Zinc regulated enzymes
fig|6666666.67501.peg.1401 CDS gi|393401708|dbj|AP012284.1| 1458891 1457950 -3 - 942 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67501.peg.1402 CDS gi|393401708|dbj|AP012284.1| 1459466 1458894 -2 - 573 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.67501.peg.1403 CDS gi|393401708|dbj|AP012284.1| 1460045 1461424 2 + 1380 Cell division inhibitor Persister Cells
fig|6666666.67501.peg.1404 CDS gi|393401708|dbj|AP012284.1| 1461429 1461902 3 + 474 FIG00544983: hypothetical protein - none -
fig|6666666.67501.peg.1405 CDS gi|393401708|dbj|AP012284.1| 1461895 1462320 1 + 426 hypothetical protein - none -
fig|6666666.67501.peg.1406 CDS gi|393401708|dbj|AP012284.1| 1463047 1462406 -1 - 642 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67501.peg.1407 CDS gi|393401708|dbj|AP012284.1| 1463619 1463056 -3 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67501.peg.1408 CDS gi|393401708|dbj|AP012284.1| 1464874 1463780 -1 - 1095 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67501.peg.1409 CDS gi|393401708|dbj|AP012284.1| 1465392 1464952 -3 - 441 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67501.peg.1410 CDS gi|393401708|dbj|AP012284.1| 1466474 1465395 -2 - 1080 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67501.peg.1411 CDS gi|393401708|dbj|AP012284.1| 1467121 1466525 -1 - 597 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67501.peg.1412 CDS gi|393401708|dbj|AP012284.1| 1468374 1467130 -3 - 1245 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67501.peg.1413 CDS gi|393401708|dbj|AP012284.1| 1468933 1468427 -1 - 507 signal peptidase - none -
fig|6666666.67501.peg.1414 CDS gi|393401708|dbj|AP012284.1| 1469888 1469013 -2 - 876 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67501.peg.1415 CDS gi|393401708|dbj|AP012284.1| 1471158 1470010 -3 - 1149 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67501.peg.1416 CDS gi|393401708|dbj|AP012284.1| 1471755 1471162 -3 - 594 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.67501.peg.1417 CDS gi|393401708|dbj|AP012284.1| 1474794 1472122 -3 - 2673 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67501.peg.1418 CDS gi|393401708|dbj|AP012284.1| 1476364 1475027 -1 - 1338 ATPase, AAA family - none -
fig|6666666.67501.peg.1419 CDS gi|393401708|dbj|AP012284.1| 1477883 1476552 -2 - 1332 FIG00995901: hypothetical protein - none -
fig|6666666.67501.peg.1420 CDS gi|393401708|dbj|AP012284.1| 1479813 1478020 -3 - 1794 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67501.peg.1421 CDS gi|393401708|dbj|AP012284.1| 1480132 1481007 1 + 876 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67501.peg.1422 CDS gi|393401708|dbj|AP012284.1| 1483810 1481051 -1 - 2760 COG0553: Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.67501.peg.1423 CDS gi|393401708|dbj|AP012284.1| 1485867 1483846 -3 - 2022 Putative membrane protein - none -
fig|6666666.67501.peg.1424 CDS gi|393401708|dbj|AP012284.1| 1486470 1485910 -3 - 561 No significant database matches - none -
fig|6666666.67501.peg.1425 CDS gi|393401708|dbj|AP012284.1| 1486517 1486861 2 + 345 hypothetical protein - none -
fig|6666666.67501.peg.1426 CDS gi|393401708|dbj|AP012284.1| 1486839 1487441 3 + 603 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.1427 CDS gi|393401708|dbj|AP012284.1| 1487429 1487965 2 + 537 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.67501.peg.1428 CDS gi|393401708|dbj|AP012284.1| 1488197 1489603 2 + 1407 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67501.peg.1429 CDS gi|393401708|dbj|AP012284.1| 1489597 1489710 1 + 114 hypothetical protein - none -
fig|6666666.67501.peg.1430 CDS gi|393401708|dbj|AP012284.1| 1490941 1489670 -1 - 1272 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67501.peg.1431 CDS gi|393401708|dbj|AP012284.1| 1491662 1491024 -2 - 639 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67501.peg.1432 CDS gi|393401708|dbj|AP012284.1| 1492246 1491722 -1 - 525 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.67501.peg.1433 CDS gi|393401708|dbj|AP012284.1| 1492431 1493285 3 + 855 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.67501.peg.1434 CDS gi|393401708|dbj|AP012284.1| 1493682 1493939 3 + 258 hypothetical protein - none -
fig|6666666.67501.peg.1435 CDS gi|393401708|dbj|AP012284.1| 1496392 1494101 -1 - 2292 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67501.peg.1436 CDS gi|393401708|dbj|AP012284.1| 1497013 1496456 -1 - 558 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67501.peg.1437 CDS gi|393401708|dbj|AP012284.1| 1497139 1497017 -1 - 123 hypothetical protein - none -
fig|6666666.67501.peg.1438 CDS gi|393401708|dbj|AP012284.1| 1498764 1497172 -3 - 1593 dipeptide-binding protein DciAE - none -
fig|6666666.67501.peg.1439 CDS gi|393401708|dbj|AP012284.1| 1500158 1499037 -2 - 1122 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67501.peg.1440 CDS gi|393401708|dbj|AP012284.1| 1502023 1500155 -1 - 1869 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67501.peg.1441 CDS gi|393401708|dbj|AP012284.1| 1502696 1502361 -2 - 336 hypothetical protein - none -
fig|6666666.67501.peg.1442 CDS gi|393401708|dbj|AP012284.1| 1503839 1502742 -2 - 1098 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67501.peg.1443 CDS gi|393401708|dbj|AP012284.1| 1504475 1503861 -2 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67501.peg.1444 CDS gi|393401708|dbj|AP012284.1| 1505212 1504625 -1 - 588 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67501.peg.1445 CDS gi|393401708|dbj|AP012284.1| 1506313 1505561 -1 - 753 FIG000859: hypothetical protein - none -
fig|6666666.67501.peg.1446 CDS gi|393401708|dbj|AP012284.1| 1507453 1506593 -1 - 861 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.67501.peg.1447 CDS gi|393401708|dbj|AP012284.1| 1507666 1509153 1 + 1488 putative integral membrane protein - none -
fig|6666666.67501.peg.1448 CDS gi|393401708|dbj|AP012284.1| 1509215 1509928 2 + 714 Pimeloyl-CoA synthase (EC 6.2.1.14) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67501.peg.1449 CDS gi|393401708|dbj|AP012284.1| 1509925 1511136 1 + 1212 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.67501.peg.1450 CDS gi|393401708|dbj|AP012284.1| 1511606 1511148 -2 - 459 FIG053954: Probable conserved membrane protein - none -
fig|6666666.67501.peg.1451 CDS gi|393401708|dbj|AP012284.1| 1512712 1511612 -1 - 1101 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.67501.peg.1452 CDS gi|393401708|dbj|AP012284.1| 1513725 1512808 -3 - 918 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.67501.peg.1453 CDS gi|393401708|dbj|AP012284.1| 1514411 1513722 -2 - 690 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.1454 CDS gi|393401708|dbj|AP012284.1| 1514997 1514404 -3 - 594 FIG049476: HIT family protein - none -
fig|6666666.67501.peg.1455 CDS gi|393401708|dbj|AP012284.1| 1517237 1515168 -2 - 2070 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.67501.peg.1456 CDS gi|393401708|dbj|AP012284.1| 1518778 1517471 -1 - 1308 Dyp-type peroxidase family protein - none -
fig|6666666.67501.peg.1457 CDS gi|393401708|dbj|AP012284.1| 1519495 1518890 -1 - 606 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67501.peg.1458 CDS gi|393401708|dbj|AP012284.1| 1520072 1519500 -2 - 573 FIG00543909: hypothetical protein - none -
fig|6666666.67501.peg.1459 CDS gi|393401708|dbj|AP012284.1| 1521136 1520807 -1 - 330 hypothetical protein - none -
fig|6666666.67501.peg.1460 CDS gi|393401708|dbj|AP012284.1| 1521674 1521799 2 + 126 hypothetical protein - none -
fig|6666666.67501.peg.1461 CDS gi|393401708|dbj|AP012284.1| 1522520 1523284 2 + 765 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) homolog - none -
fig|6666666.67501.peg.1462 CDS gi|393401708|dbj|AP012284.1| 1523356 1524636 1 + 1281 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67501.peg.1463 CDS gi|393401708|dbj|AP012284.1| 1524860 1525270 2 + 411 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67501.peg.1464 CDS gi|393401708|dbj|AP012284.1| 1526052 1525348 -3 - 705 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.1465 CDS gi|393401708|dbj|AP012284.1| 1526345 1526953 2 + 609 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67501.peg.1466 CDS gi|393401708|dbj|AP012284.1| 1526964 1528169 3 + 1206 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.67501.peg.1467 CDS gi|393401708|dbj|AP012284.1| 1530113 1528194 -2 - 1920 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67501.peg.1468 CDS gi|393401708|dbj|AP012284.1| 1530457 1530335 -1 - 123 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67501.peg.1469 CDS gi|393401708|dbj|AP012284.1| 1531655 1530528 -2 - 1128 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67501.peg.1470 CDS gi|393401708|dbj|AP012284.1| 1532360 1531656 -2 - 705 PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH PROTEIN - none -
fig|6666666.67501.peg.1471 CDS gi|393401708|dbj|AP012284.1| 1533199 1532387 -1 - 813 FIG01122115: hypothetical protein - none -
fig|6666666.67501.peg.1472 CDS gi|393401708|dbj|AP012284.1| 1533767 1533306 -2 - 462 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67501.peg.1473 CDS gi|393401708|dbj|AP012284.1| 1534033 1534497 1 + 465 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67501.peg.1474 CDS gi|393401708|dbj|AP012284.1| 1534945 1534652 -1 - 294 FIG01121218: hypothetical protein - none -
fig|6666666.67501.peg.1475 CDS gi|393401708|dbj|AP012284.1| 1536071 1535139 -2 - 933 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67501.peg.1476 CDS gi|393401708|dbj|AP012284.1| 1536268 1536122 -1 - 147 hypothetical protein - none -
fig|6666666.67501.peg.1477 CDS gi|393401708|dbj|AP012284.1| 1536286 1537038 1 + 753 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67501.peg.1478 CDS gi|393401708|dbj|AP012284.1| 1537405 1539006 1 + 1602 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.67501.peg.1479 CDS gi|393401708|dbj|AP012284.1| 1539599 1539075 -2 - 525 hypothetical membrane protein - none -
fig|6666666.67501.peg.1480 CDS gi|393401708|dbj|AP012284.1| 1541447 1539741 -2 - 1707 DNA or RNA helicases of superfamily II - none -
fig|6666666.67501.peg.1481 CDS gi|393401708|dbj|AP012284.1| 1541683 1541444 -1 - 240 FIG00998432: hypothetical protein - none -
fig|6666666.67501.peg.1482 CDS gi|393401708|dbj|AP012284.1| 1541743 1542249 1 + 507 FIG00545207: hypothetical protein - none -
fig|6666666.67501.peg.1483 CDS gi|393401708|dbj|AP012284.1| 1542418 1543944 1 + 1527 probable transferase - none -
fig|6666666.67501.peg.1484 CDS gi|393401708|dbj|AP012284.1| 1544041 1543928 -1 - 114 hypothetical protein - none -
fig|6666666.67501.peg.1485 CDS gi|393401708|dbj|AP012284.1| 1544049 1544384 3 + 336 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67501.peg.1486 CDS gi|393401708|dbj|AP012284.1| 1544523 1545512 3 + 990 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67501.peg.1487 CDS gi|393401708|dbj|AP012284.1| 1545782 1546462 2 + 681 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.1488 CDS gi|393401708|dbj|AP012284.1| 1546474 1547457 1 + 984 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.67501.peg.1489 CDS gi|393401708|dbj|AP012284.1| 1548566 1547499 -2 - 1068 FIG00544535: hypothetical protein - none -
fig|6666666.67501.peg.1490 CDS gi|393401708|dbj|AP012284.1| 1548957 1549970 3 + 1014 FIG00994994: hypothetical protein - none -
fig|6666666.67501.peg.1491 CDS gi|393401708|dbj|AP012284.1| 1550126 1552666 2 + 2541 putative helicase - none -
fig|6666666.67501.peg.1492 CDS gi|393401708|dbj|AP012284.1| 1553326 1552802 -1 - 525 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.67501.peg.1493 CDS gi|393401708|dbj|AP012284.1| 1554067 1553471 -1 - 597 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.67501.peg.1494 CDS gi|393401708|dbj|AP012284.1| 1554066 1554200 3 + 135 hypothetical protein - none -
fig|6666666.67501.peg.1495 CDS gi|393401708|dbj|AP012284.1| 1554378 1555319 3 + 942 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67501.peg.1496 CDS gi|393401708|dbj|AP012284.1| 1556424 1555396 -3 - 1029 FIG00544563: hypothetical protein - none -
fig|6666666.67501.peg.1497 CDS gi|393401708|dbj|AP012284.1| 1556676 1560674 3 + 3999 ATP-dependent helicase HrpA - none -
fig|6666666.67501.peg.1498 CDS gi|393401708|dbj|AP012284.1| 1560901 1560671 -1 - 231 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67501.peg.1499 CDS gi|393401708|dbj|AP012284.1| 1561619 1561236 -2 - 384 hypothetical protein - none -
fig|6666666.67501.peg.1500 CDS gi|393401708|dbj|AP012284.1| 1561921 1562628 1 + 708 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67501.peg.1501 CDS gi|393401708|dbj|AP012284.1| 1562917 1563693 1 + 777 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.67501.peg.1502 CDS gi|393401708|dbj|AP012284.1| 1565476 1563773 -1 - 1704 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.67501.peg.1503 CDS gi|393401708|dbj|AP012284.1| 1565686 1566489 1 + 804 Putative sugar related operon transcriptional regulator (PTS system) - none -
fig|6666666.67501.peg.1504 CDS gi|393401708|dbj|AP012284.1| 1566486 1567466 3 + 981 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67501.peg.1505 CDS gi|393401708|dbj|AP012284.1| 1567615 1569654 1 + 2040 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67501.peg.1506 CDS gi|393401708|dbj|AP012284.1| 1569933 1570199 3 + 267 Phosphocarrier protein of PTS system - none -
fig|6666666.67501.peg.1507 CDS gi|393401708|dbj|AP012284.1| 1570409 1571524 2 + 1116 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67501.peg.1508 CDS gi|393401708|dbj|AP012284.1| 1571528 1572190 2 + 663 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.67501.peg.1509 CDS gi|393401708|dbj|AP012284.1| 1572487 1572218 -1 - 270 hypothetical protein - none -
fig|6666666.67501.peg.1510 CDS gi|393401708|dbj|AP012284.1| 1574003 1572831 -2 - 1173 xanthine/uracil permeases - none -
fig|6666666.67501.peg.1511 CDS gi|393401708|dbj|AP012284.1| 1575820 1574198 -1 - 1623 GTP-binding protein HflX Hfl operon
fig|6666666.67501.peg.1512 CDS gi|393401708|dbj|AP012284.1| 1576101 1576829 3 + 729 FIG00546075: hypothetical protein - none -
fig|6666666.67501.peg.1513 CDS gi|393401708|dbj|AP012284.1| 1576925 1577449 2 + 525 FIG00543926: hypothetical protein - none -
fig|6666666.67501.peg.1514 CDS gi|393401708|dbj|AP012284.1| 1578406 1577513 -1 - 894 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.1515 CDS gi|393401708|dbj|AP012284.1| 1579374 1578403 -3 - 972 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.67501.peg.1516 CDS gi|393401708|dbj|AP012284.1| 1579931 1579365 -2 - 567 No significant database matches - none -
fig|6666666.67501.peg.1517 CDS gi|393401708|dbj|AP012284.1| 1580354 1581706 2 + 1353 ATPase involved in DNA repair - none -
fig|6666666.67501.peg.1518 CDS gi|393401708|dbj|AP012284.1| 1581717 1582853 3 + 1137 hypothetical protein - none -
fig|6666666.67501.peg.1519 CDS gi|393401708|dbj|AP012284.1| 1583538 1582867 -3 - 672 FIG00544570: hypothetical protein - none -
fig|6666666.67501.peg.1520 CDS gi|393401708|dbj|AP012284.1| 1585253 1583607 -2 - 1647 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67501.peg.1521 CDS gi|393401708|dbj|AP012284.1| 1585855 1585250 -1 - 606 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67501.peg.1522 CDS gi|393401708|dbj|AP012284.1| 1586957 1585848 -2 - 1110 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67501.peg.1523 CDS gi|393401708|dbj|AP012284.1| 1587433 1587212 -1 - 222 FIG00545605: hypothetical protein - none -
fig|6666666.67501.peg.1524 CDS gi|393401708|dbj|AP012284.1| 1587502 1588101 1 + 600 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67501.peg.1525 CDS gi|393401708|dbj|AP012284.1| 1588106 1588798 2 + 693 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67501.peg.1526 CDS gi|393401708|dbj|AP012284.1| 1588795 1589409 1 + 615 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.67501.peg.1527 CDS gi|393401708|dbj|AP012284.1| 1590326 1589490 -2 - 837 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67501.peg.1528 CDS gi|393401708|dbj|AP012284.1| 1590780 1590448 -3 - 333 putative transcription regulator - none -
fig|6666666.67501.peg.1529 CDS gi|393401708|dbj|AP012284.1| 1591411 1590896 -1 - 516 Similar to C-terminal domain of competence/damage-inducible protein CinA - none -
fig|6666666.67501.peg.1530 CDS gi|393401708|dbj|AP012284.1| 1591994 1591401 -2 - 594 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.1531 CDS gi|393401708|dbj|AP012284.1| 1592106 1592399 3 + 294 FIG00544062: hypothetical protein - none -
fig|6666666.67501.peg.1532 CDS gi|393401708|dbj|AP012284.1| 1593542 1592523 -2 - 1020 Integral membrane protein TerC - none -
fig|6666666.67501.peg.1533 CDS gi|393401708|dbj|AP012284.1| 1593784 1593626 -1 - 159 hypothetical protein - none -
fig|6666666.67501.peg.1534 CDS gi|393401708|dbj|AP012284.1| 1596841 1593842 -1 - 3000 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67501.peg.1535 CDS gi|393401708|dbj|AP012284.1| 1597708 1597058 -1 - 651 FIG00996591: hypothetical protein - none -
fig|6666666.67501.peg.1536 CDS gi|393401708|dbj|AP012284.1| 1599844 1597793 -1 - 2052 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.67501.peg.1537 CDS gi|393401708|dbj|AP012284.1| 1600752 1599847 -3 - 906 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67501.peg.1538 CDS gi|393401708|dbj|AP012284.1| 1601644 1600886 -1 - 759 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67501.peg.1539 CDS gi|393401708|dbj|AP012284.1| 1602393 1601644 -3 - 750 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67501.peg.1540 CDS gi|393401708|dbj|AP012284.1| 1604947 1602644 -1 - 2304 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.67501.peg.1541 CDS gi|393401708|dbj|AP012284.1| 1605356 1605087 -2 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.67501.peg.1542 CDS gi|393401708|dbj|AP012284.1| 1606520 1605555 -2 - 966 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67501.peg.1543 CDS gi|393401708|dbj|AP012284.1| 1607518 1606538 -1 - 981 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67501.peg.1544 CDS gi|393401708|dbj|AP012284.1| 1607549 1608463 2 + 915 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67501.peg.1545 CDS gi|393401708|dbj|AP012284.1| 1609159 1608488 -1 - 672 4@1-phosphopantetheinyl transferase entD (EC 2.7.8.-) - none -
fig|6666666.67501.peg.1546 CDS gi|393401708|dbj|AP012284.1| 1610031 1609156 -3 - 876 putative SimX4 homolog - none -
fig|6666666.67501.peg.1547 CDS gi|393401708|dbj|AP012284.1| 1611454 1610102 -1 - 1353 putative DNA-damage-inducible protein F - none -
fig|6666666.67501.peg.1548 CDS gi|393401708|dbj|AP012284.1| 1612541 1611549 -2 - 993 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67501.peg.1549 CDS gi|393401708|dbj|AP012284.1| 1612971 1612534 -3 - 438 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67501.peg.1550 CDS gi|393401708|dbj|AP012284.1| 1613018 1613149 2 + 132 hypothetical protein - none -
fig|6666666.67501.peg.1551 CDS gi|393401708|dbj|AP012284.1| 1616080 1613201 -1 - 2880 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67501.peg.1552 CDS gi|393401708|dbj|AP012284.1| 1616560 1616186 -1 - 375 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67501.peg.1553 CDS gi|393401708|dbj|AP012284.1| 1616595 1616795 3 + 201 hypothetical protein - none -
fig|6666666.67501.peg.1554 CDS gi|393401708|dbj|AP012284.1| 1617835 1616837 -1 - 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67501.peg.1555 CDS gi|393401708|dbj|AP012284.1| 1618323 1617832 -3 - 492 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.67501.peg.1556 CDS gi|393401708|dbj|AP012284.1| 1618385 1619359 2 + 975 FIG00544866: hypothetical protein - none -
fig|6666666.67501.peg.1557 CDS gi|393401708|dbj|AP012284.1| 1621211 1619454 -2 - 1758 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.67501.peg.1558 CDS gi|393401708|dbj|AP012284.1| 1621244 1621981 2 + 738 UPF0246 protein YaaA - none -
fig|6666666.67501.peg.1559 CDS gi|393401708|dbj|AP012284.1| 1622815 1622048 -1 - 768 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.67501.peg.1560 CDS gi|393401708|dbj|AP012284.1| 1622883 1624286 3 + 1404 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67501.peg.1561 CDS gi|393401708|dbj|AP012284.1| 1625429 1624314 -2 - 1116 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis);
Zinc regulated enzymes
fig|6666666.67501.peg.1562 CDS gi|393401708|dbj|AP012284.1| 1626033 1625470 -3 - 564 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67501.peg.1563 CDS gi|393401708|dbj|AP012284.1| 1627393 1626020 -1 - 1374 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis
fig|6666666.67501.peg.1564 CDS gi|393401708|dbj|AP012284.1| 1628049 1627387 -3 - 663 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Cobalamin synthesis
fig|6666666.67501.peg.1565 CDS gi|393401708|dbj|AP012284.1| 1628703 1628104 -3 - 600 ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67501.peg.1566 CDS gi|393401708|dbj|AP012284.1| 1629955 1628861 -1 - 1095 ChlI component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.67501.peg.1567 CDS gi|393401708|dbj|AP012284.1| 1631568 1630069 -3 - 1500 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67501.peg.1568 CDS gi|393401708|dbj|AP012284.1| 1631711 1631571 -2 - 141 hypothetical protein - none -
fig|6666666.67501.peg.1569 CDS gi|393401708|dbj|AP012284.1| 1632255 1633247 3 + 993 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67501.peg.1570 CDS gi|393401708|dbj|AP012284.1| 1633573 1634964 1 + 1392 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67501.peg.1571 CDS gi|393401708|dbj|AP012284.1| 1635245 1636180 2 + 936 hypothetical protein - none -
fig|6666666.67501.peg.1572 CDS gi|393401708|dbj|AP012284.1| 1637643 1636189 -3 - 1455 Cobyric acid synthase - none -
fig|6666666.67501.peg.1573 CDS gi|393401708|dbj|AP012284.1| 1638599 1637706 -2 - 894 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67501.peg.1574 CDS gi|393401708|dbj|AP012284.1| 1640511 1638670 -3 - 1842 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.1575 CDS gi|393401708|dbj|AP012284.1| 1641842 1640667 -2 - 1176 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67501.peg.1576 CDS gi|393401708|dbj|AP012284.1| 1642012 1641896 -1 - 117 hypothetical protein - none -
fig|6666666.67501.peg.1577 CDS gi|393401708|dbj|AP012284.1| 1643223 1642009 -3 - 1215 Membrane-associated zinc metalloprotease - none -
fig|6666666.67501.peg.1578 CDS gi|393401708|dbj|AP012284.1| 1644444 1643278 -3 - 1167 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67501.peg.1579 CDS gi|393401708|dbj|AP012284.1| 1644709 1644584 -1 - 126 hypothetical protein - none -
fig|6666666.67501.peg.1580 CDS gi|393401708|dbj|AP012284.1| 1644945 1644832 -3 - 114 hypothetical protein - none -
fig|6666666.67501.peg.1581 CDS gi|393401708|dbj|AP012284.1| 1645002 1645427 3 + 426 hypothetical membrane protein - none -
fig|6666666.67501.peg.1582 CDS gi|393401708|dbj|AP012284.1| 1646728 1645538 -1 - 1191 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67501.peg.1583 CDS gi|393401708|dbj|AP012284.1| 1646871 1647299 3 + 429 FIG00994532: hypothetical protein - none -
fig|6666666.67501.peg.1584 CDS gi|393401708|dbj|AP012284.1| 1648244 1647366 -2 - 879 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.1585 CDS gi|393401708|dbj|AP012284.1| 1648985 1648428 -2 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67501.peg.1586 CDS gi|393401708|dbj|AP012284.1| 1649847 1649116 -3 - 732 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67501.peg.1587 CDS gi|393401708|dbj|AP012284.1| 1651079 1650252 -2 - 828 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67501.peg.1588 CDS gi|393401708|dbj|AP012284.1| 1652204 1651374 -2 - 831 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.67501.peg.1589 CDS gi|393401708|dbj|AP012284.1| 1652575 1653105 1 + 531 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.67501.peg.1590 CDS gi|393401708|dbj|AP012284.1| 1653994 1653113 -1 - 882 Tyrosine recombinase XerC - none -
fig|6666666.67501.peg.1591 CDS gi|393401708|dbj|AP012284.1| 1655481 1654321 -3 - 1161 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67501.peg.1592 CDS gi|393401708|dbj|AP012284.1| 1657028 1655478 -2 - 1551 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67501.peg.1593 CDS gi|393401708|dbj|AP012284.1| 1657416 1657015 -3 - 402 hypothetical protein - none -
fig|6666666.67501.peg.1594 CDS gi|393401708|dbj|AP012284.1| 1657889 1659598 2 + 1710 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.67501.peg.1595 CDS gi|393401708|dbj|AP012284.1| 1659598 1660296 1 + 699 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Thiamin biosynthesis
fig|6666666.67501.peg.1596 CDS gi|393401708|dbj|AP012284.1| 1660287 1661447 3 + 1161 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.67501.peg.1597 CDS gi|393401708|dbj|AP012284.1| 1661461 1661664 1 + 204 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.67501.peg.1598 CDS gi|393401708|dbj|AP012284.1| 1661665 1662453 1 + 789 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67501.peg.1599 CDS gi|393401708|dbj|AP012284.1| 1662454 1663596 1 + 1143 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67501.peg.1600 CDS gi|393401708|dbj|AP012284.1| 1663599 1664432 3 + 834 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.67501.peg.1601 CDS gi|393401708|dbj|AP012284.1| 1664752 1664447 -1 - 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67501.peg.1602 CDS gi|393401708|dbj|AP012284.1| 1665479 1664757 -2 - 723 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.67501.peg.1603 CDS gi|393401708|dbj|AP012284.1| 1666268 1665489 -2 - 780 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67501.peg.1604 CDS gi|393401708|dbj|AP012284.1| 1666853 1666512 -2 - 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67501.peg.1605 CDS gi|393401708|dbj|AP012284.1| 1669344 1667041 -3 - 2304 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67501.peg.1606 CDS gi|393401708|dbj|AP012284.1| 1671410 1669407 -2 - 2004 PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.67501.peg.1607 CDS gi|393401708|dbj|AP012284.1| 1671871 1671494 -1 - 378 FIG00545499: hypothetical protein - none -
fig|6666666.67501.peg.1608 CDS gi|393401708|dbj|AP012284.1| 1672793 1671924 -2 - 870 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.67501.peg.1609 CDS gi|393401708|dbj|AP012284.1| 1673362 1672793 -1 - 570 16S rRNA processing protein RimM - none -
fig|6666666.67501.peg.1610 CDS gi|393401708|dbj|AP012284.1| 1673484 1673882 3 + 399 FIG00544922: hypothetical protein - none -
fig|6666666.67501.peg.1611 CDS gi|393401708|dbj|AP012284.1| 1674436 1673963 -1 - 474 SSU ribosomal protein S16p - none -
fig|6666666.67501.peg.1612 CDS gi|393401708|dbj|AP012284.1| 1676290 1674674 -1 - 1617 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.67501.peg.1613 CDS gi|393401708|dbj|AP012284.1| 1678621 1676384 -1 - 2238 [Protein-PII] uridylyltransferase (EC 2.7.7.59) CBSS-312309.3.peg.1965
fig|6666666.67501.peg.1614 CDS gi|393401708|dbj|AP012284.1| 1679032 1678694 -1 - 339 Nitrogen regulatory protein P-II - none -
fig|6666666.67501.peg.1615 CDS gi|393401708|dbj|AP012284.1| 1681050 1679392 -3 - 1659 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.67501.peg.1616 CDS gi|393401708|dbj|AP012284.1| 1684816 1681217 -1 - 3600 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.67501.peg.1617 CDS gi|393401708|dbj|AP012284.1| 1688153 1685034 -2 - 3120 Chromosome partition protein smc - none -
fig|6666666.67501.peg.1618 CDS gi|393401708|dbj|AP012284.1| 1688401 1688583 1 + 183 hypothetical protein - none -
fig|6666666.67501.peg.1619 CDS gi|393401708|dbj|AP012284.1| 1688912 1688580 -2 - 333 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67501.peg.1620 CDS gi|393401708|dbj|AP012284.1| 1690525 1689068 -1 - 1458 amino acid carrier protein - none -
fig|6666666.67501.peg.1621 CDS gi|393401708|dbj|AP012284.1| 1691662 1690805 -1 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67501.peg.1622 CDS gi|393401708|dbj|AP012284.1| 1692435 1691686 -3 - 750 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67501.peg.1623 CDS gi|393401708|dbj|AP012284.1| 1692959 1692432 -2 - 528 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67501.peg.1624 CDS gi|393401708|dbj|AP012284.1| 1693756 1693022 -1 - 735 Cell division initiation protein - none -
fig|6666666.67501.peg.1625 CDS gi|393401708|dbj|AP012284.1| 1694152 1694727 1 + 576 Bifunctional deaminase-reductase domain protein - none -
fig|6666666.67501.peg.1626 CDS gi|393401708|dbj|AP012284.1| 1695867 1694755 -3 - 1113 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.67501.peg.1627 CDS gi|393401708|dbj|AP012284.1| 1697436 1696090 -3 - 1347 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67501.peg.1628 CDS gi|393401708|dbj|AP012284.1| 1697951 1699141 2 + 1191 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.67501.peg.1629 CDS gi|393401708|dbj|AP012284.1| 1699542 1699111 -3 - 432 hypothetical protein - none -
fig|6666666.67501.peg.1630 CDS gi|393401708|dbj|AP012284.1| 1699586 1700911 2 + 1326 No significant database matches - none -
fig|6666666.67501.peg.1631 CDS gi|393401708|dbj|AP012284.1| 1701038 1702288 2 + 1251 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67501.peg.1632 CDS gi|393401708|dbj|AP012284.1| 1702358 1702471 2 + 114 hypothetical protein - none -
fig|6666666.67501.peg.1633 CDS gi|393401708|dbj|AP012284.1| 1703118 1705526 3 + 2409 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.1634 CDS gi|393401708|dbj|AP012284.1| 1705761 1706336 3 + 576 Putative secreted protein - none -
fig|6666666.67501.peg.1635 CDS gi|393401708|dbj|AP012284.1| 1707741 1706407 -3 - 1335 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67501.peg.1636 CDS gi|393401708|dbj|AP012284.1| 1708920 1708069 -3 - 852 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67501.peg.1637 CDS gi|393401708|dbj|AP012284.1| 1709886 1709077 -3 - 810 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67501.peg.1638 CDS gi|393401708|dbj|AP012284.1| 1710663 1710022 -3 - 642 FIG00997095: hypothetical protein - none -
fig|6666666.67501.peg.1639 CDS gi|393401708|dbj|AP012284.1| 1711080 1710724 -3 - 357 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis;
Zinc regulated enzymes
fig|6666666.67501.peg.1640 CDS gi|393401708|dbj|AP012284.1| 1711954 1711160 -1 - 795 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67501.peg.1641 CDS gi|393401708|dbj|AP012284.1| 1712872 1712090 -1 - 783 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67501.peg.1642 CDS gi|393401708|dbj|AP012284.1| 1713597 1712869 -3 - 729 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.67501.peg.1643 CDS gi|393401708|dbj|AP012284.1| 1714346 1713714 -2 - 633 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67501.peg.1644 CDS gi|393401708|dbj|AP012284.1| 1715753 1714368 -2 - 1386 putative transport protein - none -
fig|6666666.67501.peg.1645 CDS gi|393401708|dbj|AP012284.1| 1716173 1715985 -2 - 189 hypothetical protein - none -
fig|6666666.67501.peg.1646 CDS gi|393401708|dbj|AP012284.1| 1716799 1716191 -1 - 609 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67501.peg.1647 CDS gi|393401708|dbj|AP012284.1| 1718040 1716925 -3 - 1116 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67501.peg.1648 CDS gi|393401708|dbj|AP012284.1| 1719437 1718118 -2 - 1320 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67501.peg.1649 CDS gi|393401708|dbj|AP012284.1| 1719534 1719391 -3 - 144 hypothetical protein - none -
fig|6666666.67501.peg.1650 CDS gi|393401708|dbj|AP012284.1| 1719827 1720831 2 + 1005 hypothetical protein - none -
fig|6666666.67501.peg.1651 CDS gi|393401708|dbj|AP012284.1| 1721527 1720847 -1 - 681 hypothetical protein - none -
fig|6666666.67501.peg.1652 CDS gi|393401708|dbj|AP012284.1| 1722298 1721639 -1 - 660 FIG00545144: hypothetical protein - none -
fig|6666666.67501.peg.1653 CDS gi|393401708|dbj|AP012284.1| 1722693 1723304 3 + 612 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.67501.peg.1654 CDS gi|393401708|dbj|AP012284.1| 1723315 1725528 1 + 2214 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67501.peg.1655 CDS gi|393401708|dbj|AP012284.1| 1725832 1727190 1 + 1359 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67501.peg.1656 CDS gi|393401708|dbj|AP012284.1| 1727578 1727973 1 + 396 hypothetical protein - none -
fig|6666666.67501.peg.1657 CDS gi|393401708|dbj|AP012284.1| 1728117 1729160 3 + 1044 FIG00544169: hypothetical protein - none -
fig|6666666.67501.peg.1658 CDS gi|393401708|dbj|AP012284.1| 1729246 1729371 1 + 126 hypothetical protein - none -
fig|6666666.67501.peg.1659 CDS gi|393401708|dbj|AP012284.1| 1729812 1729438 -3 - 375 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67501.peg.1660 CDS gi|393401708|dbj|AP012284.1| 1730089 1729856 -1 - 234 FIG00544856: hypothetical protein - none -
fig|6666666.67501.peg.1661 CDS gi|393401708|dbj|AP012284.1| 1730762 1730127 -2 - 636 FIG000605: protein co-occurring with transport systems (COG1739) - none -
fig|6666666.67501.peg.1662 CDS gi|393401708|dbj|AP012284.1| 1732127 1730823 -2 - 1305 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67501.peg.1663 CDS gi|393401708|dbj|AP012284.1| 1735792 1732232 -1 - 3561 DNA polymerase III alpha subunit (EC 2.7.7.7) Phage replication
fig|6666666.67501.peg.1664 CDS gi|393401708|dbj|AP012284.1| 1735988 1736872 2 + 885 Protein rarD - none -
fig|6666666.67501.peg.1665 CDS gi|393401708|dbj|AP012284.1| 1737384 1736869 -3 - 516 FIG00544566: hypothetical protein - none -
fig|6666666.67501.peg.1666 CDS gi|393401708|dbj|AP012284.1| 1738404 1737481 -3 - 924 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67501.peg.1667 CDS gi|393401708|dbj|AP012284.1| 1738888 1738397 -1 - 492 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67501.peg.1668 CDS gi|393401708|dbj|AP012284.1| 1739026 1740024 1 + 999 FIG00994935: hypothetical protein - none -
fig|6666666.67501.peg.1669 CDS gi|393401708|dbj|AP012284.1| 1740717 1740115 -3 - 603 Putative secreted protein - none -
fig|6666666.67501.peg.1670 CDS gi|393401708|dbj|AP012284.1| 1741106 1742047 2 + 942 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67501.peg.1671 CDS gi|393401708|dbj|AP012284.1| 1743411 1742044 -3 - 1368 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67501.peg.1672 CDS gi|393401708|dbj|AP012284.1| 1746735 1743574 -3 - 3162 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67501.peg.1673 CDS gi|393401708|dbj|AP012284.1| 1747014 1746889 -3 - 126 hypothetical protein - none -
fig|6666666.67501.peg.1674 CDS gi|393401708|dbj|AP012284.1| 1747299 1747111 -3 - 189 hypothetical protein - none -
fig|6666666.67501.peg.1675 CDS gi|393401708|dbj|AP012284.1| 1748415 1747399 -3 - 1017 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria - none -
fig|6666666.67501.peg.1676 CDS gi|393401708|dbj|AP012284.1| 1749019 1748723 -1 - 297 hypothetical protein - none -
fig|6666666.67501.peg.1677 CDS gi|393401708|dbj|AP012284.1| 1749731 1749282 -2 - 450 FIG021292: hypothetical protein - none -
fig|6666666.67501.peg.1678 CDS gi|393401708|dbj|AP012284.1| 1750626 1749907 -3 - 720 COG1496: Uncharacterized conserved protein - none -
fig|6666666.67501.peg.1679 CDS gi|393401708|dbj|AP012284.1| 1751900 1750629 -2 - 1272 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67501.peg.1680 CDS gi|393401708|dbj|AP012284.1| 1752830 1752174 -2 - 657 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67501.peg.1681 CDS gi|393401708|dbj|AP012284.1| 1754303 1752846 -2 - 1458 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67501.peg.1682 CDS gi|393401708|dbj|AP012284.1| 1755517 1754432 -1 - 1086 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67501.peg.1683 CDS gi|393401708|dbj|AP012284.1| 1757151 1755517 -3 - 1635 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67501.peg.1684 CDS gi|393401708|dbj|AP012284.1| 1758589 1757204 -1 - 1386 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67501.peg.1685 CDS gi|393401708|dbj|AP012284.1| 1759693 1758593 -1 - 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67501.peg.1686 CDS gi|393401708|dbj|AP012284.1| 1761247 1759697 -1 - 1551 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67501.peg.1687 CDS gi|393401708|dbj|AP012284.1| 1762842 1761331 -3 - 1512 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67501.peg.1688 CDS gi|393401708|dbj|AP012284.1| 1764960 1762933 -3 - 2028 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.1689 CDS gi|393401708|dbj|AP012284.1| 1765701 1764994 -3 - 708 hypothetical protein - none -
fig|6666666.67501.peg.1690 CDS gi|393401708|dbj|AP012284.1| 1766757 1765717 -3 - 1041 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67501.peg.1691 CDS gi|393401708|dbj|AP012284.1| 1767373 1766942 -1 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67501.peg.1692 CDS gi|393401708|dbj|AP012284.1| 1767863 1767720 -2 - 144 hypothetical protein - none -
fig|6666666.67501.peg.1693 CDS gi|393401708|dbj|AP012284.1| 1768286 1767891 -2 - 396 FIG017342: transmembrane protein - none -
fig|6666666.67501.peg.1694 CDS gi|393401708|dbj|AP012284.1| 1768845 1768423 -3 - 423 hypothetical protein - none -
fig|6666666.67501.peg.1695 CDS gi|393401708|dbj|AP012284.1| 1769173 1769643 1 + 471 hypothetical protein - none -
fig|6666666.67501.peg.1696 CDS gi|393401708|dbj|AP012284.1| 1770623 1769640 -2 - 984 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.67501.peg.1697 CDS gi|393401708|dbj|AP012284.1| 1770855 1771973 3 + 1119 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.67501.peg.1698 CDS gi|393401708|dbj|AP012284.1| 1771980 1773464 3 + 1485 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67501.peg.1699 CDS gi|393401708|dbj|AP012284.1| 1773814 1773461 -1 - 354 Conserved hypothetical regulatory protein - none -
fig|6666666.67501.peg.1700 CDS gi|393401708|dbj|AP012284.1| 1773920 1776199 2 + 2280 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67501.peg.1701 CDS gi|393401708|dbj|AP012284.1| 1777697 1776309 -2 - 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67501.peg.1702 CDS gi|393401708|dbj|AP012284.1| 1778327 1777824 -2 - 504 FIG00994909: hypothetical protein - none -
fig|6666666.67501.peg.1703 CDS gi|393401708|dbj|AP012284.1| 1779792 1778470 -3 - 1323 hypothetical membrane protein - none -
fig|6666666.67501.peg.1704 CDS gi|393401708|dbj|AP012284.1| 1780749 1780021 -3 - 729 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.1705 CDS gi|393401708|dbj|AP012284.1| 1781737 1780784 -1 - 954 ROK family protein (putative glucokinase) - none -
fig|6666666.67501.peg.1706 CDS gi|393401708|dbj|AP012284.1| 1782991 1781861 -1 - 1131 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67501.peg.1707 CDS gi|393401708|dbj|AP012284.1| 1784078 1783074 -2 - 1005 NLP/P60 family protein - none -
fig|6666666.67501.peg.1708 CDS gi|393401708|dbj|AP012284.1| 1784944 1784249 -1 - 696 putative secreted protein - none -
fig|6666666.67501.peg.1709 CDS gi|393401708|dbj|AP012284.1| 1787264 1785642 -2 - 1623 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67501.peg.1710 CDS gi|393401708|dbj|AP012284.1| 1788481 1787261 -1 - 1221 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67501.peg.1711 CDS gi|393401708|dbj|AP012284.1| 1789374 1788478 -3 - 897 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67501.peg.1712 CDS gi|393401708|dbj|AP012284.1| 1790053 1789463 -1 - 591 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67501.peg.1713 CDS gi|393401708|dbj|AP012284.1| 1791081 1790650 -3 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67501.peg.1714 CDS gi|393401708|dbj|AP012284.1| 1792188 1791103 -3 - 1086 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67501.peg.1715 CDS gi|393401708|dbj|AP012284.1| 1792702 1794624 1 + 1923 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67501.peg.1716 CDS gi|393401708|dbj|AP012284.1| 1795205 1794858 -2 - 348 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67501.peg.1717 CDS gi|393401708|dbj|AP012284.1| 1795483 1796406 1 + 924 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67501.peg.1718 CDS gi|393401708|dbj|AP012284.1| 1796411 1796965 2 + 555 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis
fig|6666666.67501.peg.1719 CDS gi|393401708|dbj|AP012284.1| 1797013 1798077 1 + 1065 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis
fig|6666666.67501.peg.1720 CDS gi|393401708|dbj|AP012284.1| 1798174 1798995 1 + 822 Cobalamin synthase - none -
fig|6666666.67501.peg.1721 CDS gi|393401708|dbj|AP012284.1| 1800203 1799103 -2 - 1101 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67501.peg.1722 CDS gi|393401708|dbj|AP012284.1| 1800312 1801829 3 + 1518 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67501.peg.1723 CDS gi|393401708|dbj|AP012284.1| 1802216 1801941 -2 - 276 Putative oxidoreductase - none -
fig|6666666.67501.peg.1724 CDS gi|393401708|dbj|AP012284.1| 1802464 1804446 1 + 1983 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67501.peg.1725 CDS gi|393401708|dbj|AP012284.1| 1804895 1807678 2 + 2784 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67501.peg.1726 CDS gi|393401708|dbj|AP012284.1| 1807775 1808908 2 + 1134 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67501.peg.1727 CDS gi|393401708|dbj|AP012284.1| 1808973 1809359 3 + 387 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67501.peg.1728 CDS gi|393401708|dbj|AP012284.1| 1809919 1809446 -1 - 474 hypothetical protein - none -
fig|6666666.67501.peg.1729 CDS gi|393401708|dbj|AP012284.1| 1810004 1810774 2 + 771 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67501.peg.1730 CDS gi|393401708|dbj|AP012284.1| 1810899 1811918 3 + 1020 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67501.peg.1731 CDS gi|393401708|dbj|AP012284.1| 1812953 1812069 -2 - 885 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67501.peg.1732 CDS gi|393401708|dbj|AP012284.1| 1814053 1812962 -1 - 1092 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.67501.peg.1733 CDS gi|393401708|dbj|AP012284.1| 1815036 1814050 -3 - 987 hypothetical protein - none -
fig|6666666.67501.peg.1734 CDS gi|393401708|dbj|AP012284.1| 1816076 1815093 -2 - 984 putative iron ABC transport system, solute-binding protein - none -
fig|6666666.67501.peg.1735 CDS gi|393401708|dbj|AP012284.1| 1816251 1817165 3 + 915 Siderophore-interacting protein - none -
fig|6666666.67501.peg.1736 CDS gi|393401708|dbj|AP012284.1| 1817337 1818107 3 + 771 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67501.peg.1737 CDS gi|393401708|dbj|AP012284.1| 1818657 1818184 -3 - 474 FIG00543905: hypothetical protein - none -
fig|6666666.67501.peg.1738 CDS gi|393401708|dbj|AP012284.1| 1818861 1820297 3 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.1739 CDS gi|393401708|dbj|AP012284.1| 1820525 1821520 2 + 996 hypothetical protein - none -
fig|6666666.67501.peg.1740 CDS gi|393401708|dbj|AP012284.1| 1821960 1822571 3 + 612 Mobile element protein - none -
fig|6666666.67501.peg.1741 CDS gi|393401708|dbj|AP012284.1| 1822802 1823284 2 + 483 Membrane protein - none -
fig|6666666.67501.peg.1742 CDS gi|393401708|dbj|AP012284.1| 1823250 1823954 3 + 705 Membrane protein - none -
fig|6666666.67501.peg.1743 CDS gi|393401708|dbj|AP012284.1| 1825372 1824029 -1 - 1344 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67501.peg.1744 CDS gi|393401708|dbj|AP012284.1| 1825946 1825737 -2 - 210 hypothetical protein - none -
fig|6666666.67501.peg.1745 CDS gi|393401708|dbj|AP012284.1| 1827692 1826322 -2 - 1371 Histidine permease YuiF - none -
fig|6666666.67501.peg.1746 CDS gi|393401708|dbj|AP012284.1| 1828564 1828028 -1 - 537 FIG00547029: hypothetical protein - none -
fig|6666666.67501.peg.1747 CDS gi|393401708|dbj|AP012284.1| 1828751 1828611 -2 - 141 hypothetical protein - none -
fig|6666666.67501.peg.1748 CDS gi|393401708|dbj|AP012284.1| 1830414 1828966 -3 - 1449 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67501.peg.1749 CDS gi|393401708|dbj|AP012284.1| 1830647 1831420 2 + 774 putative secreted protein - none -
fig|6666666.67501.peg.1750 CDS gi|393401708|dbj|AP012284.1| 1831556 1832725 2 + 1170 FIG00545265: hypothetical protein - none -
fig|6666666.67501.peg.1751 CDS gi|393401708|dbj|AP012284.1| 1833014 1832754 -2 - 261 hypothetical protein - none -
fig|6666666.67501.peg.1752 CDS gi|393401708|dbj|AP012284.1| 1833746 1833108 -2 - 639 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.1753 CDS gi|393401708|dbj|AP012284.1| 1837042 1833896 -1 - 3147 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) CBSS-316057.3.peg.3521
fig|6666666.67501.peg.1754 CDS gi|393401708|dbj|AP012284.1| 1838477 1837128 -2 - 1350 Glutamine synthetase type I (EC 6.3.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.1755 CDS gi|393401708|dbj|AP012284.1| 1838640 1839584 3 + 945 hypothetical protein - none -
fig|6666666.67501.peg.1756 CDS gi|393401708|dbj|AP012284.1| 1839670 1841325 1 + 1656 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.67501.peg.1757 CDS gi|393401708|dbj|AP012284.1| 1841581 1841396 -1 - 186 hypothetical protein - none -
fig|6666666.67501.peg.1758 CDS gi|393401708|dbj|AP012284.1| 1841843 1841637 -2 - 207 hypothetical protein - none -
fig|6666666.67501.peg.1759 CDS gi|393401708|dbj|AP012284.1| 1841802 1843097 3 + 1296 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.67501.peg.1760 CDS gi|393401708|dbj|AP012284.1| 1844479 1843094 -1 - 1386 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.67501.peg.1761 CDS gi|393401708|dbj|AP012284.1| 1846186 1845044 -1 - 1143 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.67501.peg.1762 CDS gi|393401708|dbj|AP012284.1| 1846902 1846186 -3 - 717 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.67501.peg.1763 CDS gi|393401708|dbj|AP012284.1| 1847572 1847057 -1 - 516 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.67501.peg.1764 CDS gi|393401708|dbj|AP012284.1| 1848222 1847614 -3 - 609 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.67501.peg.1765 CDS gi|393401708|dbj|AP012284.1| 1849244 1848219 -2 - 1026 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis
fig|6666666.67501.peg.1766 CDS gi|393401708|dbj|AP012284.1| 1849545 1850042 3 + 498 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.67501.peg.1767 CDS gi|393401708|dbj|AP012284.1| 1850023 1850532 1 + 510 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.67501.peg.1768 CDS gi|393401708|dbj|AP012284.1| 1850566 1851486 1 + 921 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67501.peg.1769 CDS gi|393401708|dbj|AP012284.1| 1852461 1851496 -3 - 966 Adenosylcobinamide-phosphate synthase - none -
fig|6666666.67501.peg.1770 CDS gi|393401708|dbj|AP012284.1| 1853164 1852727 -1 - 438 FIG01123188: hypothetical protein - none -
fig|6666666.67501.peg.1771 CDS gi|393401708|dbj|AP012284.1| 1853338 1856073 1 + 2736 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67501.peg.1772 CDS gi|393401708|dbj|AP012284.1| 1857128 1856163 -2 - 966 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.67501.peg.1773 CDS gi|393401708|dbj|AP012284.1| 1857200 1857508 2 + 309 hypothetical protein - none -
fig|6666666.67501.peg.1774 CDS gi|393401708|dbj|AP012284.1| 1857505 1858326 1 + 822 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.67501.peg.1775 CDS gi|393401708|dbj|AP012284.1| 1858689 1858327 -3 - 363 hypothetical protein - none -
fig|6666666.67501.peg.1776 CDS gi|393401708|dbj|AP012284.1| 1859678 1858869 -2 - 810 beta-lactamase class C - none -
fig|6666666.67501.peg.1777 CDS gi|393401708|dbj|AP012284.1| 1860403 1859684 -1 - 720 FIG00544992: hypothetical protein - none -
fig|6666666.67501.peg.1778 CDS gi|393401708|dbj|AP012284.1| 1861249 1861491 1 + 243 FIG00549194: hypothetical protein - none -
fig|6666666.67501.peg.1779 CDS gi|393401708|dbj|AP012284.1| 1861584 1862165 3 + 582 Putative thiamine biosynthesis related protein - none -
fig|6666666.67501.peg.1780 CDS gi|393401708|dbj|AP012284.1| 1864141 1862225 -1 - 1917 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.67501.peg.1781 CDS gi|393401708|dbj|AP012284.1| 1866170 1864296 -2 - 1875 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67501.peg.1782 CDS gi|393401708|dbj|AP012284.1| 1866336 1866217 -3 - 120 hypothetical protein - none -
fig|6666666.67501.peg.1783 CDS gi|393401708|dbj|AP012284.1| 1866321 1866857 3 + 537 putative ribonuclease - none -
fig|6666666.67501.peg.1784 CDS gi|393401708|dbj|AP012284.1| 1866847 1867104 1 + 258 hypothetical protein - none -
fig|6666666.67501.peg.1785 CDS gi|393401708|dbj|AP012284.1| 1868375 1867101 -2 - 1275 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.67501.peg.1786 CDS gi|393401708|dbj|AP012284.1| 1869220 1868378 -1 - 843 EpiH/GdmH-related protein - none -
fig|6666666.67501.peg.1787 CDS gi|393401708|dbj|AP012284.1| 1869442 1871406 1 + 1965 FIG00543878: hypothetical protein - none -
fig|6666666.67501.peg.1788 CDS gi|393401708|dbj|AP012284.1| 1871882 1871454 -2 - 429 hypothetical protein - none -
fig|6666666.67501.peg.1789 CDS gi|393401708|dbj|AP012284.1| 1872429 1871902 -3 - 528 FIG00544046: hypothetical protein - none -
fig|6666666.67501.peg.1790 CDS gi|393401708|dbj|AP012284.1| 1873865 1872480 -2 - 1386 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67501.peg.1791 CDS gi|393401708|dbj|AP012284.1| 1874096 1873938 -2 - 159 hypothetical protein - none -
fig|6666666.67501.peg.1792 CDS gi|393401708|dbj|AP012284.1| 1874336 1874737 2 + 402 hypothetical protein - none -
fig|6666666.67501.peg.1793 CDS gi|393401708|dbj|AP012284.1| 1875017 1875442 2 + 426 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress;
Zinc regulated enzymes
fig|6666666.67501.peg.1794 CDS gi|393401708|dbj|AP012284.1| 1876615 1875515 -1 - 1101 FIG00544679: hypothetical protein - none -
fig|6666666.67501.peg.1795 CDS gi|393401708|dbj|AP012284.1| 1877349 1876612 -3 - 738 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67501.peg.1796 CDS gi|393401708|dbj|AP012284.1| 1878064 1877369 -1 - 696 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67501.peg.1797 CDS gi|393401708|dbj|AP012284.1| 1879014 1878097 -3 - 918 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67501.peg.1798 CDS gi|393401708|dbj|AP012284.1| 1879963 1879112 -1 - 852 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67501.peg.1799 CDS gi|393401708|dbj|AP012284.1| 1881355 1880024 -1 - 1332 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67501.peg.1800 CDS gi|393401708|dbj|AP012284.1| 1881942 1881352 -3 - 591 FIG000233: metal-dependent hydrolase - none -
fig|6666666.67501.peg.1801 CDS gi|393401708|dbj|AP012284.1| 1882980 1881943 -3 - 1038 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67501.peg.1802 CDS gi|393401708|dbj|AP012284.1| 1883798 1883028 -2 - 771 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67501.peg.1803 CDS gi|393401708|dbj|AP012284.1| 1884952 1883816 -1 - 1137 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67501.peg.1804 CDS gi|393401708|dbj|AP012284.1| 1886231 1885185 -2 - 1047 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67501.peg.1805 CDS gi|393401708|dbj|AP012284.1| 1887459 1886305 -3 - 1155 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.67501.peg.1806 CDS gi|393401708|dbj|AP012284.1| 1888143 1887463 -3 - 681 FIG00543880: hypothetical protein - none -
fig|6666666.67501.peg.1807 CDS gi|393401708|dbj|AP012284.1| 1888261 1888461 1 + 201 hypothetical protein - none -
fig|6666666.67501.peg.1808 CDS gi|393401708|dbj|AP012284.1| 1890329 1888494 -2 - 1836 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67501.peg.1809 CDS gi|393401708|dbj|AP012284.1| 1890558 1892744 3 + 2187 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67501.peg.1810 CDS gi|393401708|dbj|AP012284.1| 1892940 1892800 -3 - 141 hypothetical protein - none -
fig|6666666.67501.peg.1811 CDS gi|393401708|dbj|AP012284.1| 1893201 1892983 -3 - 219 hypothetical protein - none -
fig|6666666.67501.peg.1812 CDS gi|393401708|dbj|AP012284.1| 1895208 1893208 -3 - 2001 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67501.peg.1813 CDS gi|393401708|dbj|AP012284.1| 1895319 1896590 3 + 1272 FIG00547479: hypothetical protein - none -
fig|6666666.67501.peg.1814 CDS gi|393401708|dbj|AP012284.1| 1897332 1896778 -3 - 555 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.67501.peg.1815 CDS gi|393401708|dbj|AP012284.1| 1898913 1897366 -3 - 1548 hypothetical protein - none -
fig|6666666.67501.peg.1816 CDS gi|393401708|dbj|AP012284.1| 1899594 1898917 -3 - 678 hypothetical protein - none -
fig|6666666.67501.peg.1817 CDS gi|393401708|dbj|AP012284.1| 1900404 1899898 -3 - 507 FIG00545146: hypothetical protein - none -
fig|6666666.67501.peg.1818 CDS gi|393401708|dbj|AP012284.1| 1900528 1902375 1 + 1848 putative ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.1819 CDS gi|393401708|dbj|AP012284.1| 1902520 1903839 1 + 1320 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67501.peg.1820 CDS gi|393401708|dbj|AP012284.1| 1903847 1904833 2 + 987 FIG00546307: hypothetical protein - none -
fig|6666666.67501.peg.1821 CDS gi|393401708|dbj|AP012284.1| 1904959 1906146 1 + 1188 hypothetical protein - none -
fig|6666666.67501.peg.1822 CDS gi|393401708|dbj|AP012284.1| 1907959 1906127 -1 - 1833 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.67501.peg.1823 CDS gi|393401708|dbj|AP012284.1| 1908272 1908499 2 + 228 hypothetical protein - none -
fig|6666666.67501.peg.1824 CDS gi|393401708|dbj|AP012284.1| 1909489 1908569 -1 - 921 Auxin Efflux Carrier - none -
fig|6666666.67501.peg.1825 CDS gi|393401708|dbj|AP012284.1| 1909552 1911120 1 + 1569 Putative ABC transport system solute-binding secreted protein - none -
fig|6666666.67501.peg.1826 CDS gi|393401708|dbj|AP012284.1| 1911120 1912070 3 + 951 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67501.peg.1827 CDS gi|393401708|dbj|AP012284.1| 1912075 1912926 1 + 852 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67501.peg.1828 CDS gi|393401708|dbj|AP012284.1| 1912923 1914356 3 + 1434 ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.1829 CDS gi|393401708|dbj|AP012284.1| 1914482 1914348 -2 - 135 hypothetical protein - none -
fig|6666666.67501.peg.1830 CDS gi|393401708|dbj|AP012284.1| 1915798 1914512 -1 - 1287 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.67501.peg.1831 CDS gi|393401708|dbj|AP012284.1| 1915899 1916597 3 + 699 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism
fig|6666666.67501.peg.1832 CDS gi|393401708|dbj|AP012284.1| 1917916 1916594 -1 - 1323 hypothetical protein - none -
fig|6666666.67501.peg.1833 CDS gi|393401708|dbj|AP012284.1| 1918239 1918006 -3 - 234 hypothetical protein - none -
fig|6666666.67501.peg.1834 CDS gi|393401708|dbj|AP012284.1| 1918244 1918435 2 + 192 hypothetical protein - none -
fig|6666666.67501.peg.1835 CDS gi|393401708|dbj|AP012284.1| 1920181 1918436 -1 - 1746 Putative transport system membrane protein - none -
fig|6666666.67501.peg.1836 CDS gi|393401708|dbj|AP012284.1| 1921695 1920187 -3 - 1509 Putative secreted protein - none -
fig|6666666.67501.peg.1837 CDS gi|393401708|dbj|AP012284.1| 1922939 1921692 -2 - 1248 hypothetical protein - none -
fig|6666666.67501.peg.1838 CDS gi|393401708|dbj|AP012284.1| 1923643 1922936 -1 - 708 FIG00547760: hypothetical protein - none -
fig|6666666.67501.peg.1839 CDS gi|393401708|dbj|AP012284.1| 1924269 1923640 -3 - 630 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67501.peg.1840 CDS gi|393401708|dbj|AP012284.1| 1924994 1924401 -2 - 594 hypothetical protein - none -
fig|6666666.67501.peg.1841 CDS gi|393401708|dbj|AP012284.1| 1926938 1925091 -2 - 1848 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.67501.peg.1842 CDS gi|393401708|dbj|AP012284.1| 1927121 1927675 2 + 555 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67501.peg.1843 CDS gi|393401708|dbj|AP012284.1| 1927972 1928235 1 + 264 SSU ribosomal protein S20p - none -
fig|6666666.67501.peg.1844 CDS gi|393401708|dbj|AP012284.1| 1928982 1928335 -3 - 648 L-lysine permease - none -
fig|6666666.67501.peg.1845 CDS gi|393401708|dbj|AP012284.1| 1929373 1928972 -1 - 402 ankyrin repeat containing protein - none -
fig|6666666.67501.peg.1846 CDS gi|393401708|dbj|AP012284.1| 1930358 1929384 -2 - 975 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67501.peg.1847 CDS gi|393401708|dbj|AP012284.1| 1932067 1930394 -1 - 1674 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.67501.peg.1848 CDS gi|393401708|dbj|AP012284.1| 1932768 1932064 -3 - 705 Putative competence protein ComEA - none -
fig|6666666.67501.peg.1849 CDS gi|393401708|dbj|AP012284.1| 1933726 1932896 -1 - 831 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67501.peg.1850 CDS gi|393401708|dbj|AP012284.1| 1934484 1933738 -3 - 747 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67501.peg.1851 CDS gi|393401708|dbj|AP012284.1| 1934956 1934489 -1 - 468 Iojap protein - none -
fig|6666666.67501.peg.1852 CDS gi|393401708|dbj|AP012284.1| 1935667 1935011 -1 - 657 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67501.peg.1853 CDS gi|393401708|dbj|AP012284.1| 1936991 1935705 -2 - 1287 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67501.peg.1854 CDS gi|393401708|dbj|AP012284.1| 1937964 1937050 -3 - 915 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67501.peg.1855 CDS gi|393401708|dbj|AP012284.1| 1938195 1938506 3 + 312 Hypothetical protein DUF454 - none -
fig|6666666.67501.peg.1856 CDS gi|393401708|dbj|AP012284.1| 1938614 1940206 2 + 1593 YidE/YbjL duplication - none -
fig|6666666.67501.peg.1857 CDS gi|393401708|dbj|AP012284.1| 1941500 1940247 -2 - 1254 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.67501.peg.1858 CDS gi|393401708|dbj|AP012284.1| 1943093 1941567 -2 - 1527 COG0536: GTP-binding protein Obg - none -
fig|6666666.67501.peg.1859 CDS gi|393401708|dbj|AP012284.1| 1943251 1943391 1 + 141 hypothetical protein - none -
fig|6666666.67501.peg.1860 CDS gi|393401708|dbj|AP012284.1| 1943654 1943388 -2 - 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67501.peg.1861 CDS gi|393401708|dbj|AP012284.1| 1943999 1943694 -2 - 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67501.peg.1862 CDS gi|393401708|dbj|AP012284.1| 1947615 1944232 -3 - 3384 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.67501.peg.1863 CDS gi|393401708|dbj|AP012284.1| 1948040 1948741 2 + 702 hypothetical protein - none -
fig|6666666.67501.peg.1864 CDS gi|393401708|dbj|AP012284.1| 1949358 1948939 -3 - 420 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.67501.peg.1865 CDS gi|393401708|dbj|AP012284.1| 1949447 1950397 2 + 951 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67501.peg.1866 CDS gi|393401708|dbj|AP012284.1| 1950851 1950423 -2 - 429 Possible membrane protein - none -
fig|6666666.67501.peg.1867 CDS gi|393401708|dbj|AP012284.1| 1952410 1950848 -1 - 1563 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67501.peg.1868 CDS gi|393401708|dbj|AP012284.1| 1955146 1952411 -1 - 2736 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67501.peg.1869 CDS gi|393401708|dbj|AP012284.1| 1956292 1955312 -1 - 981 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.67501.peg.1870 CDS gi|393401708|dbj|AP012284.1| 1956908 1957666 2 + 759 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.1871 CDS gi|393401708|dbj|AP012284.1| 1959013 1957727 -1 - 1287 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67501.peg.1872 CDS gi|393401708|dbj|AP012284.1| 1961938 1959176 -1 - 2763 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67501.peg.1873 CDS gi|393401708|dbj|AP012284.1| 1962644 1962015 -2 - 630 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67501.peg.1874 CDS gi|393401708|dbj|AP012284.1| 1963259 1962660 -2 - 600 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67501.peg.1875 CDS gi|393401708|dbj|AP012284.1| 1964952 1963600 -3 - 1353 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67501.peg.1876 CDS gi|393401708|dbj|AP012284.1| 1965830 1966072 2 + 243 FIG00544802: hypothetical protein - none -
fig|6666666.67501.peg.1877 CDS gi|393401708|dbj|AP012284.1| 1966207 1967010 1 + 804 FIG00997919: hypothetical protein - none -
fig|6666666.67501.peg.1878 CDS gi|393401708|dbj|AP012284.1| 1968077 1967097 -2 - 981 hypothetical protein - none -
fig|6666666.67501.peg.1879 CDS gi|393401708|dbj|AP012284.1| 1968659 1968225 -2 - 435 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.67501.peg.1880 CDS gi|393401708|dbj|AP012284.1| 1969541 1968921 -2 - 621 FIG00544229: hypothetical protein - none -
fig|6666666.67501.peg.1881 CDS gi|393401708|dbj|AP012284.1| 1969844 1972459 2 + 2616 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67501.peg.1882 CDS gi|393401708|dbj|AP012284.1| 1972604 1973563 2 + 960 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67501.peg.1883 CDS gi|393401708|dbj|AP012284.1| 1973589 1973981 3 + 393 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67501.peg.1884 CDS gi|393401708|dbj|AP012284.1| 1973993 1974889 2 + 897 FIG00547901: hypothetical protein - none -
fig|6666666.67501.peg.1885 CDS gi|393401708|dbj|AP012284.1| 1975501 1974893 -1 - 609 FIG01001213: hypothetical protein - none -
fig|6666666.67501.peg.1886 CDS gi|393401708|dbj|AP012284.1| 1975857 1975507 -3 - 351 FIG00544139: hypothetical protein - none -
fig|6666666.67501.peg.1887 CDS gi|393401708|dbj|AP012284.1| 1976005 1975877 -1 - 129 hypothetical protein - none -
fig|6666666.67501.peg.1888 CDS gi|393401708|dbj|AP012284.1| 1977807 1976137 -3 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.1889 CDS gi|393401708|dbj|AP012284.1| 1978540 1977977 -1 - 564 Putative single-strand binding protein - none -
fig|6666666.67501.peg.1890 CDS gi|393401708|dbj|AP012284.1| 1978424 1978579 2 + 156 hypothetical protein - none -
fig|6666666.67501.peg.1891 CDS gi|393401708|dbj|AP012284.1| 1978952 1978827 -2 - 126 hypothetical protein - none -
fig|6666666.67501.peg.1892 CDS gi|393401708|dbj|AP012284.1| 1979075 1980793 2 + 1719 hypothetical protein - none -
fig|6666666.67501.peg.1893 CDS gi|393401708|dbj|AP012284.1| 1980790 1982340 1 + 1551 protein of unknown function DUF181 - none -
fig|6666666.67501.peg.1894 CDS gi|393401708|dbj|AP012284.1| 1982376 1983860 3 + 1485 hypothetical protein - none -
fig|6666666.67501.peg.1895 CDS gi|393401708|dbj|AP012284.1| 1983857 1986457 2 + 2601 hypothetical protein - none -
fig|6666666.67501.peg.1896 CDS gi|393401708|dbj|AP012284.1| 1986457 1987470 1 + 1014 hypothetical protein - none -
fig|6666666.67501.peg.1897 CDS gi|393401708|dbj|AP012284.1| 1987467 1988444 3 + 978 hypothetical protein - none -
fig|6666666.67501.peg.1898 CDS gi|393401708|dbj|AP012284.1| 1988483 1988656 2 + 174 hypothetical protein - none -
fig|6666666.67501.peg.1899 CDS gi|393401708|dbj|AP012284.1| 1988789 1988673 -2 - 117 hypothetical protein - none -
fig|6666666.67501.peg.1900 CDS gi|393401708|dbj|AP012284.1| 1988851 1990182 1 + 1332 hypothetical protein - none -
fig|6666666.67501.peg.1901 CDS gi|393401708|dbj|AP012284.1| 1990973 1990215 -2 - 759 Putative membrane protein - none -
fig|6666666.67501.peg.1902 CDS gi|393401708|dbj|AP012284.1| 1991893 1990970 -1 - 924 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.67501.peg.1903 CDS gi|393401708|dbj|AP012284.1| 1994099 1992054 -2 - 2046 Copper resistance protein D Copper homeostasis
fig|6666666.67501.peg.1904 CDS gi|393401708|dbj|AP012284.1| 1994699 1996984 2 + 2286 Carbon starvation protein A Carbon Starvation
fig|6666666.67501.peg.1905 CDS gi|393401708|dbj|AP012284.1| 1997004 1997204 3 + 201 hypothetical protein - none -
fig|6666666.67501.peg.1906 CDS gi|393401708|dbj|AP012284.1| 1997994 1998443 3 + 450 hypothetical protein - none -
fig|6666666.67501.peg.1907 CDS gi|393401708|dbj|AP012284.1| 2000378 1998537 -2 - 1842 serine protease, subtilase family - none -
fig|6666666.67501.peg.1908 CDS gi|393401708|dbj|AP012284.1| 2000653 2001648 1 + 996 Alcohol dehydrogenase (EC 1.1.1.1) Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.1909 CDS gi|393401708|dbj|AP012284.1| 2001788 2002591 2 + 804 short-chain dehydrogenase - none -
fig|6666666.67501.peg.1910 CDS gi|393401708|dbj|AP012284.1| 2002687 2003316 1 + 630 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67501.peg.1911 CDS gi|393401708|dbj|AP012284.1| 2003540 2003427 -2 - 114 hypothetical protein - none -
fig|6666666.67501.peg.1912 CDS gi|393401708|dbj|AP012284.1| 2003523 2004323 3 + 801 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67501.peg.1913 CDS gi|393401708|dbj|AP012284.1| 2005574 2004387 -2 - 1188 putative lipoprotein - none -
fig|6666666.67501.peg.1914 CDS gi|393401708|dbj|AP012284.1| 2005606 2005872 1 + 267 hypothetical protein - none -
fig|6666666.67501.peg.1915 CDS gi|393401708|dbj|AP012284.1| 2006281 2007276 1 + 996 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.67501.peg.1916 CDS gi|393401708|dbj|AP012284.1| 2007486 2008040 3 + 555 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67501.peg.1917 CDS gi|393401708|dbj|AP012284.1| 2008400 2008056 -2 - 345 involved in biosynthesis of extracellular polysaccharides - none -
fig|6666666.67501.peg.1918 CDS gi|393401708|dbj|AP012284.1| 2008789 2008514 -1 - 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67501.peg.1919 CDS gi|393401708|dbj|AP012284.1| 2008878 2009357 3 + 480 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67501.peg.1920 CDS gi|393401708|dbj|AP012284.1| 2009398 2010051 1 + 654 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.1921 CDS gi|393401708|dbj|AP012284.1| 2010450 2010055 -3 - 396 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.67501.peg.1922 CDS gi|393401708|dbj|AP012284.1| 2019683 2010585 -2 - 9099 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67501.peg.1923 CDS gi|393401708|dbj|AP012284.1| 2020153 2019905 -1 - 249 hypothetical protein - none -
fig|6666666.67501.peg.1924 CDS gi|393401708|dbj|AP012284.1| 2020449 2021492 3 + 1044 hypothetical protein - none -
fig|6666666.67501.peg.1925 CDS gi|393401708|dbj|AP012284.1| 2021447 2022115 2 + 669 DNA-binding response regulator, LuxR family - none -
fig|6666666.67501.peg.1926 CDS gi|393401708|dbj|AP012284.1| 2022161 2023144 2 + 984 uncharacterized membrane protein - none -
fig|6666666.67501.peg.1927 CDS gi|393401708|dbj|AP012284.1| 2025049 2023643 -1 - 1407 Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) Polysaccharide deacetylases
fig|6666666.67501.peg.1928 CDS gi|393401708|dbj|AP012284.1| 2025952 2025602 -1 - 351 hypothetical protein - none -
fig|6666666.67501.peg.1929 CDS gi|393401708|dbj|AP012284.1| 2026242 2026430 3 + 189 hypothetical protein - none -
fig|6666666.67501.peg.1930 CDS gi|393401708|dbj|AP012284.1| 2026743 2027099 3 + 357 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67501.peg.1931 CDS gi|393401708|dbj|AP012284.1| 2027176 2027535 1 + 360 FIG00543835: hypothetical protein - none -
fig|6666666.67501.peg.1932 CDS gi|393401708|dbj|AP012284.1| 2028229 2027606 -1 - 624 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67501.peg.1933 CDS gi|393401708|dbj|AP012284.1| 2028969 2028226 -3 - 744 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67501.peg.1934 CDS gi|393401708|dbj|AP012284.1| 2029766 2028999 -2 - 768 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.67501.peg.1935 CDS gi|393401708|dbj|AP012284.1| 2030732 2029839 -2 - 894 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.1936 CDS gi|393401708|dbj|AP012284.1| 2031617 2030799 -2 - 819 Rhomboid membrane family protein - none -
fig|6666666.67501.peg.1937 CDS gi|393401708|dbj|AP012284.1| 2032239 2031703 -3 - 537 Transcriptional regulatory protein - none -
fig|6666666.67501.peg.1938 CDS gi|393401708|dbj|AP012284.1| 2032719 2032339 -3 - 381 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67501.peg.1939 CDS gi|393401708|dbj|AP012284.1| 2032844 2034199 2 + 1356 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global
fig|6666666.67501.peg.1940 CDS gi|393401708|dbj|AP012284.1| 2034266 2036230 2 + 1965 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67501.peg.1941 CDS gi|393401708|dbj|AP012284.1| 2036252 2036752 2 + 501 GCN5-related N-acetyltransferase - none -
fig|6666666.67501.peg.1942 CDS gi|393401708|dbj|AP012284.1| 2037933 2036749 -3 - 1185 Phosphoserine phosphatase (EC 3.1.3.3) CBSS-336982.3.peg.3874;
Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67501.peg.1943 CDS gi|393401708|dbj|AP012284.1| 2038630 2038505 -1 - 126 hypothetical protein - none -
fig|6666666.67501.peg.1944 CDS gi|393401708|dbj|AP012284.1| 2039185 2038931 -1 - 255 hypothetical protein - none -
fig|6666666.67501.peg.1945 CDS gi|393401708|dbj|AP012284.1| 2039360 2039476 2 + 117 hypothetical protein - none -
fig|6666666.67501.peg.1946 CDS gi|393401708|dbj|AP012284.1| 2040037 2040159 1 + 123 hypothetical protein - none -
fig|6666666.67501.peg.1947 CDS gi|393401708|dbj|AP012284.1| 2040627 2040875 3 + 249 hypothetical protein - none -
fig|6666666.67501.peg.1948 CDS gi|393401708|dbj|AP012284.1| 2040960 2041262 3 + 303 hypothetical protein - none -
fig|6666666.67501.peg.1949 CDS gi|393401708|dbj|AP012284.1| 2041561 2041385 -1 - 177 hypothetical protein - none -
fig|6666666.67501.peg.1950 CDS gi|393401708|dbj|AP012284.1| 2041829 2042173 2 + 345 hypothetical protein - none -
fig|6666666.67501.peg.1951 CDS gi|393401708|dbj|AP012284.1| 2043908 2042316 -2 - 1593 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67501.peg.1952 CDS gi|393401708|dbj|AP012284.1| 2044352 2044495 2 + 144 hypothetical protein - none -
fig|6666666.67501.peg.1953 CDS gi|393401708|dbj|AP012284.1| 2045491 2044505 -1 - 987 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67501.peg.1954 CDS gi|393401708|dbj|AP012284.1| 2045931 2046416 3 + 486 Putative bacterioferritin - none -
fig|6666666.67501.peg.1955 CDS gi|393401708|dbj|AP012284.1| 2048642 2046483 -2 - 2160 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67501.peg.1956 CDS gi|393401708|dbj|AP012284.1| 2049229 2048792 -1 - 438 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67501.peg.1957 CDS gi|393401708|dbj|AP012284.1| 2049589 2049356 -1 - 234 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67501.peg.1958 CDS gi|393401708|dbj|AP012284.1| 2050185 2050063 -3 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67501.peg.1959 CDS gi|393401708|dbj|AP012284.1| 2050420 2051250 1 + 831 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67501.peg.1960 CDS gi|393401708|dbj|AP012284.1| 2051705 2051262 -2 - 444 probable DNA-binding protein - none -
fig|6666666.67501.peg.1961 CDS gi|393401708|dbj|AP012284.1| 2052167 2051784 -2 - 384 hypothetical protein - none -
fig|6666666.67501.peg.1962 CDS gi|393401708|dbj|AP012284.1| 2052597 2052322 -3 - 276 hypothetical protein - none -
fig|6666666.67501.peg.1963 CDS gi|393401708|dbj|AP012284.1| 2054085 2052664 -3 - 1422 hypothetical protein - none -
fig|6666666.67501.peg.1964 CDS gi|393401708|dbj|AP012284.1| 2054956 2055771 1 + 816 hypothetical protein - none -
fig|6666666.67501.peg.1965 CDS gi|393401708|dbj|AP012284.1| 2056010 2055831 -2 - 180 hypothetical protein - none -
fig|6666666.67501.peg.1966 CDS gi|393401708|dbj|AP012284.1| 2056063 2056506 1 + 444 hypothetical protein - none -
fig|6666666.67501.peg.1967 CDS gi|393401708|dbj|AP012284.1| 2056631 2057029 2 + 399 transcriptional regulator, ArsR family - none -
fig|6666666.67501.peg.1968 CDS gi|393401708|dbj|AP012284.1| 2057047 2058867 1 + 1821 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67501.peg.1969 CDS gi|393401708|dbj|AP012284.1| 2059954 2059238 -1 - 717 FIG00544592: hypothetical protein - none -
fig|6666666.67501.peg.1970 CDS gi|393401708|dbj|AP012284.1| 2059920 2060078 3 + 159 hypothetical protein - none -
fig|6666666.67501.peg.1971 CDS gi|393401708|dbj|AP012284.1| 2060568 2060128 -3 - 441 FIG00544597: hypothetical protein - none -
fig|6666666.67501.peg.1972 CDS gi|393401708|dbj|AP012284.1| 2062331 2060694 -2 - 1638 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.67501.peg.1973 CDS gi|393401708|dbj|AP012284.1| 2062479 2062802 3 + 324 camphor resistance protein CrcB - none -
fig|6666666.67501.peg.1974 CDS gi|393401708|dbj|AP012284.1| 2062898 2063131 2 + 234 CrcB protein - none -
fig|6666666.67501.peg.1975 CDS gi|393401708|dbj|AP012284.1| 2065657 2063183 -1 - 2475 ABC-type transporter, permease component - none -
fig|6666666.67501.peg.1976 CDS gi|393401708|dbj|AP012284.1| 2066533 2065784 -1 - 750 putative ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.1978 CDS gi|393401708|dbj|AP012284.1| 2072312 2072172 -2 - 141 hypothetical protein - none -
fig|6666666.67501.peg.1979 CDS gi|393401708|dbj|AP012284.1| 2074023 2072785 -3 - 1239 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67501.peg.1980 CDS gi|393401708|dbj|AP012284.1| 2074080 2074652 3 + 573 Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) G3E family of P-loop GTPases (metallocenter biosynthesis);
Glycerol fermentation to 1,3-propanediol
fig|6666666.67501.peg.1981 CDS gi|393401708|dbj|AP012284.1| 2075558 2074719 -2 - 840 Putative transcriptional regulator - none -
fig|6666666.67501.peg.1982 CDS gi|393401708|dbj|AP012284.1| 2076321 2077256 3 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67501.peg.1983 CDS gi|393401708|dbj|AP012284.1| 2077442 2078008 2 + 567 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67501.peg.1984 CDS gi|393401708|dbj|AP012284.1| 2078365 2078069 -1 - 297 predicted acetyltransferase - none -
fig|6666666.67501.peg.1985 CDS gi|393401708|dbj|AP012284.1| 2079887 2078811 -2 - 1077 Glycerol dehydrogenase (EC 1.1.1.6) Respiratory dehydrogenases 1
fig|6666666.67501.peg.1986 CDS gi|393401708|dbj|AP012284.1| 2080798 2082321 1 + 1524 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67501.peg.1987 CDS gi|393401708|dbj|AP012284.1| 2082325 2083308 1 + 984 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67501.peg.1988 CDS gi|393401708|dbj|AP012284.1| 2083318 2084886 1 + 1569 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67501.peg.1989 CDS gi|393401708|dbj|AP012284.1| 2084919 2086466 3 + 1548 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67501.peg.1990 CDS gi|393401708|dbj|AP012284.1| 2088028 2086523 -1 - 1506 putative coenzyme A transferase - none -
fig|6666666.67501.peg.1991 CDS gi|393401708|dbj|AP012284.1| 2088704 2089849 2 + 1146 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67501.peg.1992 CDS gi|393401708|dbj|AP012284.1| 2089897 2090649 1 + 753 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67501.peg.1993 CDS gi|393401708|dbj|AP012284.1| 2090932 2090729 -1 - 204 hypothetical protein - none -
fig|6666666.67501.peg.1994 CDS gi|393401708|dbj|AP012284.1| 2091904 2091131 -1 - 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67501.peg.1995 CDS gi|393401708|dbj|AP012284.1| 2092818 2091940 -3 - 879 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67501.peg.1996 CDS gi|393401708|dbj|AP012284.1| 2093883 2092846 -3 - 1038 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67501.peg.1997 CDS gi|393401708|dbj|AP012284.1| 2095039 2093933 -1 - 1107 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67501.peg.1998 CDS gi|393401708|dbj|AP012284.1| 2096245 2095334 -1 - 912 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67501.peg.1999 CDS gi|393401708|dbj|AP012284.1| 2096296 2097084 1 + 789 FIG00544976: hypothetical protein - none -
fig|6666666.67501.peg.2000 CDS gi|393401708|dbj|AP012284.1| 2098124 2097090 -2 - 1035 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.67501.peg.2001 CDS gi|393401708|dbj|AP012284.1| 2098193 2098837 2 + 645 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67501.peg.2002 CDS gi|393401708|dbj|AP012284.1| 2099652 2098834 -3 - 819 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67501.peg.2003 CDS gi|393401708|dbj|AP012284.1| 2099634 2099753 3 + 120 hypothetical protein - none -
fig|6666666.67501.peg.2004 CDS gi|393401708|dbj|AP012284.1| 2099805 2100935 3 + 1131 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67501.peg.2005 CDS gi|393401708|dbj|AP012284.1| 2101154 2101357 2 + 204 hypothetical protein - none -
fig|6666666.67501.peg.2006 CDS gi|393401708|dbj|AP012284.1| 2102518 2101454 -1 - 1065 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67501.peg.2007 CDS gi|393401708|dbj|AP012284.1| 2104159 2102597 -1 - 1563 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67501.peg.2008 CDS gi|393401708|dbj|AP012284.1| 2104621 2104217 -1 - 405 FIG00994452: hypothetical protein - none -
fig|6666666.67501.peg.2009 CDS gi|393401708|dbj|AP012284.1| 2104760 2105182 2 + 423 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67501.peg.2010 CDS gi|393401708|dbj|AP012284.1| 2105222 2106244 2 + 1023 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67501.peg.2011 CDS gi|393401708|dbj|AP012284.1| 2106947 2106270 -2 - 678 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67501.peg.2012 CDS gi|393401708|dbj|AP012284.1| 2109386 2107086 -2 - 2301 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67501.peg.2013 CDS gi|393401708|dbj|AP012284.1| 2110072 2109401 -1 - 672 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67501.peg.2014 CDS gi|393401708|dbj|AP012284.1| 2110288 2110073 -1 - 216 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67501.peg.2015 CDS gi|393401708|dbj|AP012284.1| 2111839 2111366 -1 - 474 Putative glutathione peroxidase - none -
fig|6666666.67501.peg.2016 CDS gi|393401708|dbj|AP012284.1| 2113962 2111836 -3 - 2127 Protease II (EC 3.4.21.83) - none -
fig|6666666.67501.peg.2017 CDS gi|393401708|dbj|AP012284.1| 2114194 2114319 1 + 126 hypothetical protein - none -
fig|6666666.67501.peg.2018 CDS gi|393401708|dbj|AP012284.1| 2115266 2114373 -2 - 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67501.peg.2019 CDS gi|393401708|dbj|AP012284.1| 2116915 2115476 -1 - 1440 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67501.peg.2020 CDS gi|393401708|dbj|AP012284.1| 2117564 2116944 -2 - 621 Potassium uptake protein, integral membrane component, KtrA - none -
fig|6666666.67501.peg.2021 CDS gi|393401708|dbj|AP012284.1| 2118927 2117593 -3 - 1335 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.67501.peg.2022 CDS gi|393401708|dbj|AP012284.1| 2120265 2118985 -3 - 1281 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67501.peg.2023 CDS gi|393401708|dbj|AP012284.1| 2120305 2120730 1 + 426 HIT family protein - none -
fig|6666666.67501.peg.2024 CDS gi|393401708|dbj|AP012284.1| 2120735 2121352 2 + 618 hypothetical protein - none -
fig|6666666.67501.peg.2025 CDS gi|393401708|dbj|AP012284.1| 2122857 2121349 -3 - 1509 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67501.peg.2026 CDS gi|393401708|dbj|AP012284.1| 2123614 2122901 -1 - 714 DNA-binding response regulator - none -
fig|6666666.67501.peg.2027 CDS gi|393401708|dbj|AP012284.1| 2123786 2125240 2 + 1455 FIG00544776: hypothetical protein - none -
fig|6666666.67501.peg.2028 CDS gi|393401708|dbj|AP012284.1| 2125227 2125796 3 + 570 FIG00548485: hypothetical protein - none -
fig|6666666.67501.peg.2029 CDS gi|393401708|dbj|AP012284.1| 2125874 2127058 2 + 1185 hypothetical protein - none -
fig|6666666.67501.peg.2030 CDS gi|393401708|dbj|AP012284.1| 2127131 2129041 2 + 1911 xanthine/uracil permease - none -
fig|6666666.67501.peg.2031 CDS gi|393401708|dbj|AP012284.1| 2129926 2129045 -1 - 882 hypothetical protein - none -
fig|6666666.67501.peg.2032 CDS gi|393401708|dbj|AP012284.1| 2131805 2130069 -2 - 1737 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67501.peg.2033 CDS gi|393401708|dbj|AP012284.1| 2131960 2133429 1 + 1470 Putative amino acid export carrier protein - none -
fig|6666666.67501.peg.2034 CDS gi|393401708|dbj|AP012284.1| 2134756 2133479 -1 - 1278 hypothetical protein - none -
fig|6666666.67501.peg.2035 CDS gi|393401708|dbj|AP012284.1| 2135090 2135215 2 + 126 hypothetical protein - none -
fig|6666666.67501.peg.2036 CDS gi|393401708|dbj|AP012284.1| 2135250 2135366 3 + 117 hypothetical protein - none -
fig|6666666.67501.peg.2037 CDS gi|393401708|dbj|AP012284.1| 2135997 2137541 3 + 1545 Putative amino acid export carrier protein - none -
fig|6666666.67501.peg.2038 CDS gi|393401708|dbj|AP012284.1| 2137614 2137958 3 + 345 Putative uncharacterized protein - none -
fig|6666666.67501.peg.2039 CDS gi|393401708|dbj|AP012284.1| 2137967 2139442 2 + 1476 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.67501.peg.2040 CDS gi|393401708|dbj|AP012284.1| 2139439 2139918 1 + 480 FIG00544334: hypothetical protein - none -
fig|6666666.67501.peg.2041 CDS gi|393401708|dbj|AP012284.1| 2139928 2140653 1 + 726 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67501.peg.2042 CDS gi|393401708|dbj|AP012284.1| 2141741 2140650 -2 - 1092 Transcriptional regulator, LacI family - none -
fig|6666666.67501.peg.2043 CDS gi|393401708|dbj|AP012284.1| 2143493 2142552 -2 - 942 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67501.peg.2044 CDS gi|393401708|dbj|AP012284.1| 2144912 2143515 -2 - 1398 Cysteinyl-tRNA synthetase (EC 6.1.1.16) Zinc regulated enzymes;
tRNA aminoacylation, Cys
fig|6666666.67501.peg.2045 CDS gi|393401708|dbj|AP012284.1| 2145452 2144973 -2 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67501.peg.2046 CDS gi|393401708|dbj|AP012284.1| 2146182 2145445 -3 - 738 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67501.peg.2047 CDS gi|393401708|dbj|AP012284.1| 2146771 2146190 -1 - 582 CarD-like transcriptional regulator - none -
fig|6666666.67501.peg.2048 CDS gi|393401708|dbj|AP012284.1| 2147106 2147663 3 + 558 FIG00544037: hypothetical protein - none -
fig|6666666.67501.peg.2049 CDS gi|393401708|dbj|AP012284.1| 2149186 2147726 -1 - 1461 hypothetical protein - none -
fig|6666666.67501.peg.2050 CDS gi|393401708|dbj|AP012284.1| 2149743 2149609 -3 - 135 hypothetical protein - none -
fig|6666666.67501.peg.2051 CDS gi|393401708|dbj|AP012284.1| 2149802 2150965 2 + 1164 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67501.peg.2052 CDS gi|393401708|dbj|AP012284.1| 2151610 2150975 -1 - 636 FIG00820636: hypothetical protein - none -
fig|6666666.67501.peg.2053 CDS gi|393401708|dbj|AP012284.1| 2152184 2151753 -2 - 432 Carbonic anhydrase (EC 4.2.1.1) Zinc regulated enzymes
fig|6666666.67501.peg.2054 CDS gi|393401708|dbj|AP012284.1| 2152461 2153348 3 + 888 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67501.peg.2055 CDS gi|393401708|dbj|AP012284.1| 2154659 2153352 -2 - 1308 FIG00545264: hypothetical protein - none -
fig|6666666.67501.peg.2056 CDS gi|393401708|dbj|AP012284.1| 2154847 2154677 -1 - 171 FIG00543978: hypothetical protein - none -
fig|6666666.67501.peg.2057 CDS gi|393401708|dbj|AP012284.1| 2157507 2154850 -3 - 2658 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67501.peg.2058 CDS gi|393401708|dbj|AP012284.1| 2157740 2158381 2 + 642 hypothetical protein - none -
fig|6666666.67501.peg.2059 CDS gi|393401708|dbj|AP012284.1| 2159873 2158470 -2 - 1404 FIG00545175: hypothetical protein - none -
fig|6666666.67501.peg.2060 CDS gi|393401708|dbj|AP012284.1| 2160902 2159910 -2 - 993 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67501.peg.2061 CDS gi|393401708|dbj|AP012284.1| 2161139 2161897 2 + 759 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative Triacylglycerol metabolism;
Triacylglycerol metabolism
fig|6666666.67501.peg.2062 CDS gi|393401708|dbj|AP012284.1| 2162511 2162684 3 + 174 hypothetical protein - none -
fig|6666666.67501.peg.2063 CDS gi|393401708|dbj|AP012284.1| 2163203 2163057 -2 - 147 hypothetical protein - none -
fig|6666666.67501.peg.2064 CDS gi|393401708|dbj|AP012284.1| 2164357 2163341 -1 - 1017 TolA protein Ton and Tol transport systems
fig|6666666.67501.peg.2065 CDS gi|393401708|dbj|AP012284.1| 2164838 2164722 -2 - 117 hypothetical protein - none -
fig|6666666.67501.peg.2066 CDS gi|393401708|dbj|AP012284.1| 2165092 2164928 -1 - 165 hypothetical protein - none -
fig|6666666.67501.peg.2067 CDS gi|393401708|dbj|AP012284.1| 2166550 2165711 -1 - 840 secretory serine protease - none -
fig|6666666.67501.peg.2068 CDS gi|393401708|dbj|AP012284.1| 2168143 2166587 -1 - 1557 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67501.peg.2069 CDS gi|393401708|dbj|AP012284.1| 2168257 2169201 1 + 945 Membrane protease family protein BA0301 - none -
fig|6666666.67501.peg.2070 CDS gi|393401708|dbj|AP012284.1| 2169241 2169414 1 + 174 hypothetical protein - none -
fig|6666666.67501.peg.2071 CDS gi|393401708|dbj|AP012284.1| 2169559 2170848 1 + 1290 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.67501.peg.2072 CDS gi|393401708|dbj|AP012284.1| 2172350 2170845 -2 - 1506 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67501.peg.2073 CDS gi|393401708|dbj|AP012284.1| 2174348 2172360 -2 - 1989 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67501.peg.2074 CDS gi|393401708|dbj|AP012284.1| 2174766 2176463 3 + 1698 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67501.peg.2075 CDS gi|393401708|dbj|AP012284.1| 2177109 2176441 -3 - 669 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67501.peg.2076 CDS gi|393401708|dbj|AP012284.1| 2177503 2177117 -1 - 387 hypothetical protein - none -
fig|6666666.67501.peg.2077 CDS gi|393401708|dbj|AP012284.1| 2178015 2177500 -3 - 516 Putative membrane protein - none -
fig|6666666.67501.peg.2078 CDS gi|393401708|dbj|AP012284.1| 2178472 2178026 -1 - 447 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67501.peg.2079 CDS gi|393401708|dbj|AP012284.1| 2178924 2178469 -3 - 456 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67501.peg.2080 CDS gi|393401708|dbj|AP012284.1| 2179267 2178926 -1 - 342 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67501.peg.2081 CDS gi|393401708|dbj|AP012284.1| 2180036 2179254 -2 - 783 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67501.peg.2082 CDS gi|393401708|dbj|AP012284.1| 2180631 2180038 -3 - 594 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
Zinc regulated enzymes
fig|6666666.67501.peg.2083 CDS gi|393401708|dbj|AP012284.1| 2182600 2180594 -1 - 2007 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67501.peg.2084 CDS gi|393401708|dbj|AP012284.1| 2183178 2182597 -3 - 582 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67501.peg.2085 CDS gi|393401708|dbj|AP012284.1| 2184054 2183182 -3 - 873 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67501.peg.2086 CDS gi|393401708|dbj|AP012284.1| 2185239 2184055 -3 - 1185 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67501.peg.2087 CDS gi|393401708|dbj|AP012284.1| 2185289 2185765 2 + 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67501.peg.2088 CDS gi|393401708|dbj|AP012284.1| 2185767 2186051 3 + 285 rhodanese-related sulfurtransferase - none -
fig|6666666.67501.peg.2089 CDS gi|393401708|dbj|AP012284.1| 2187530 2186088 -2 - 1443 putative sodium:dicarboxylate symporter - none -
fig|6666666.67501.peg.2090 CDS gi|393401708|dbj|AP012284.1| 2187871 2189118 1 + 1248 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67501.peg.2091 CDS gi|393401708|dbj|AP012284.1| 2189140 2189580 1 + 441 Transcriptional regulator, MarR family - none -
fig|6666666.67501.peg.2092 CDS gi|393401708|dbj|AP012284.1| 2189581 2193411 1 + 3831 putative non-ribosomal peptide synthetase - none -
fig|6666666.67501.peg.2093 CDS gi|393401708|dbj|AP012284.1| 2193845 2194012 2 + 168 hypothetical protein - none -
fig|6666666.67501.peg.2094 CDS gi|393401708|dbj|AP012284.1| 2195391 2194486 -3 - 906 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67501.peg.2095 CDS gi|393401708|dbj|AP012284.1| 2195763 2195581 -3 - 183 hypothetical protein - none -
fig|6666666.67501.peg.2096 CDS gi|393401708|dbj|AP012284.1| 2195964 2195815 -3 - 150 hypothetical protein - none -
fig|6666666.67501.peg.2097 CDS gi|393401708|dbj|AP012284.1| 2196831 2196706 -3 - 126 hypothetical protein - none -
fig|6666666.67501.peg.2098 CDS gi|393401708|dbj|AP012284.1| 2197076 2196885 -2 - 192 hypothetical protein - none -
fig|6666666.67501.peg.2099 CDS gi|393401708|dbj|AP012284.1| 2199122 2197482 -2 - 1641 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67501.peg.2100 CDS gi|393401708|dbj|AP012284.1| 2199301 2200695 1 + 1395 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67501.peg.2101 CDS gi|393401708|dbj|AP012284.1| 2200731 2200904 3 + 174 hypothetical protein - none -
fig|6666666.67501.peg.2102 CDS gi|393401708|dbj|AP012284.1| 2200879 2201022 1 + 144 hypothetical protein - none -
fig|6666666.67501.peg.2103 CDS gi|393401708|dbj|AP012284.1| 2201120 2201668 2 + 549 Acetyl-CoA acetyltransferase - none -
fig|6666666.67501.peg.2104 CDS gi|393401708|dbj|AP012284.1| 2205379 2201741 -1 - 3639 hypothetical protein - none -
fig|6666666.67501.peg.2105 CDS gi|393401708|dbj|AP012284.1| 2205739 2208597 1 + 2859 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67501.peg.2106 CDS gi|393401708|dbj|AP012284.1| 2208598 2209092 1 + 495 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67501.peg.2107 CDS gi|393401708|dbj|AP012284.1| 2209089 2210759 3 + 1671 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67501.peg.2108 CDS gi|393401708|dbj|AP012284.1| 2210756 2211271 2 + 516 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67501.peg.2109 CDS gi|393401708|dbj|AP012284.1| 2211268 2211540 1 + 273 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67501.peg.2110 CDS gi|393401708|dbj|AP012284.1| 2211540 2211893 3 + 354 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67501.peg.2111 CDS gi|393401708|dbj|AP012284.1| 2214258 2213140 -3 - 1119 Putative cytoplasmic protein - none -
fig|6666666.67501.peg.2112 CDS gi|393401708|dbj|AP012284.1| 2214820 2214278 -1 - 543 FIG00544658: hypothetical protein - none -
fig|6666666.67501.peg.2113 CDS gi|393401708|dbj|AP012284.1| 2215109 2214831 -2 - 279 hypothetical protein - none -
fig|6666666.67501.peg.2114 CDS gi|393401708|dbj|AP012284.1| 2215108 2215701 1 + 594 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67501.peg.2115 CDS gi|393401708|dbj|AP012284.1| 2215708 2216670 1 + 963 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67501.peg.2116 CDS gi|393401708|dbj|AP012284.1| 2216725 2217441 1 + 717 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67501.peg.2117 CDS gi|393401708|dbj|AP012284.1| 2217438 2218931 3 + 1494 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.2118 CDS gi|393401708|dbj|AP012284.1| 2219700 2218939 -3 - 762 Putative ABC transport system membrane protein - none -
fig|6666666.67501.peg.2119 CDS gi|393401708|dbj|AP012284.1| 2220591 2219701 -3 - 891 putative ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.2120 CDS gi|393401708|dbj|AP012284.1| 2221123 2220644 -1 - 480 mutT3 - none -
fig|6666666.67501.peg.2121 CDS gi|393401708|dbj|AP012284.1| 2221392 2222627 3 + 1236 FIG00543876: hypothetical protein - none -
fig|6666666.67501.peg.2122 CDS gi|393401708|dbj|AP012284.1| 2222627 2223583 2 + 957 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67501.peg.2123 CDS gi|393401708|dbj|AP012284.1| 2223580 2225826 1 + 2247 serine/threonine protein kinase - none -
fig|6666666.67501.peg.2124 CDS gi|393401708|dbj|AP012284.1| 2227025 2225823 -2 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67501.peg.2125 CDS gi|393401708|dbj|AP012284.1| 2228417 2227029 -2 - 1389 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67501.peg.2126 CDS gi|393401708|dbj|AP012284.1| 2228667 2230019 3 + 1353 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) - none -
fig|6666666.67501.peg.2127 CDS gi|393401708|dbj|AP012284.1| 2230003 2230491 1 + 489 FIG00544625: hypothetical protein - none -
fig|6666666.67501.peg.2128 CDS gi|393401708|dbj|AP012284.1| 2230790 2231773 2 + 984 No significant database matches - none -
fig|6666666.67501.peg.2129 CDS gi|393401708|dbj|AP012284.1| 2232832 2233335 1 + 504 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.67501.peg.2130 CDS gi|393401708|dbj|AP012284.1| 2234863 2233373 -1 - 1491 hypothetical protein - none -
fig|6666666.67501.peg.2131 CDS gi|393401708|dbj|AP012284.1| 2235031 2234864 -1 - 168 hypothetical protein - none -
fig|6666666.67501.peg.2132 CDS gi|393401708|dbj|AP012284.1| 2236028 2235135 -2 - 894 hypothetical protein - none -
fig|6666666.67501.peg.2133 CDS gi|393401708|dbj|AP012284.1| 2236645 2236031 -1 - 615 hypothetical protein - none -
fig|6666666.67501.peg.2134 CDS gi|393401708|dbj|AP012284.1| 2236803 2236678 -3 - 126 hypothetical protein - none -
fig|6666666.67501.peg.2135 CDS gi|393401708|dbj|AP012284.1| 2236907 2237212 2 + 306 hypothetical protein - none -
fig|6666666.67501.peg.2136 CDS gi|393401708|dbj|AP012284.1| 2237212 2237466 1 + 255 hypothetical protein - none -
fig|6666666.67501.peg.2137 CDS gi|393401708|dbj|AP012284.1| 2237492 2237743 2 + 252 hypothetical protein - none -
fig|6666666.67501.peg.2138 CDS gi|393401708|dbj|AP012284.1| 2238308 2237787 -2 - 522 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.67501.peg.2139 CDS gi|393401708|dbj|AP012284.1| 2239130 2238321 -2 - 810 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67501.peg.2140 CDS gi|393401708|dbj|AP012284.1| 2240523 2239123 -3 - 1401 ResB-like protein - none -
fig|6666666.67501.peg.2141 CDS gi|393401708|dbj|AP012284.1| 2241261 2240533 -3 - 729 hypothetical protein - none -
fig|6666666.67501.peg.2142 CDS gi|393401708|dbj|AP012284.1| 2242702 2241251 -1 - 1452 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.67501.peg.2143 CDS gi|393401708|dbj|AP012284.1| 2243199 2242714 -3 - 486 Cytochrome c nitrite reductase, small subunit NrfH Nitrate and nitrite ammonification
fig|6666666.67501.peg.2144 CDS gi|393401708|dbj|AP012284.1| 2243437 2243586 1 + 150 hypothetical protein - none -
fig|6666666.67501.peg.2145 CDS gi|393401708|dbj|AP012284.1| 2243916 2243734 -3 - 183 hypothetical protein - none -
fig|6666666.67501.peg.2146 CDS gi|393401708|dbj|AP012284.1| 2245207 2243921 -1 - 1287 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67501.peg.2147 CDS gi|393401708|dbj|AP012284.1| 2245288 2246142 1 + 855 FIG00545467: hypothetical protein - none -
fig|6666666.67501.peg.2148 CDS gi|393401708|dbj|AP012284.1| 2247132 2246143 -3 - 990 FIG00549618: hypothetical protein - none -
fig|6666666.67501.peg.2149 CDS gi|393401708|dbj|AP012284.1| 2247377 2248468 2 + 1092 Putative secreted protein - none -
fig|6666666.67501.peg.2150 CDS gi|393401708|dbj|AP012284.1| 2249636 2248482 -2 - 1155 FIG00549127: hypothetical protein - none -
fig|6666666.67501.peg.2151 CDS gi|393401708|dbj|AP012284.1| 2250270 2249704 -3 - 567 Putative integral membrane protein - none -
fig|6666666.67501.peg.2152 CDS gi|393401708|dbj|AP012284.1| 2250581 2250267 -2 - 315 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67501.peg.2153 CDS gi|393401708|dbj|AP012284.1| 2255277 2250697 -3 - 4581 FIG00549311: hypothetical protein - none -
fig|6666666.67501.peg.2154 CDS gi|393401708|dbj|AP012284.1| 2256489 2255455 -3 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67501.peg.2155 CDS gi|393401708|dbj|AP012284.1| 2257785 2256643 -3 - 1143 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67501.peg.2156 CDS gi|393401708|dbj|AP012284.1| 2258549 2257878 -2 - 672 probable RNA methyltransferase - none -
fig|6666666.67501.peg.2157 CDS gi|393401708|dbj|AP012284.1| 2259087 2258542 -3 - 546 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67501.peg.2158 CDS gi|393401708|dbj|AP012284.1| 2260134 2259136 -3 - 999 FIG00544840: hypothetical protein - none -
fig|6666666.67501.peg.2159 CDS gi|393401708|dbj|AP012284.1| 2260981 2260145 -1 - 837 Rhodanese-related sulfurtransferase - none -
fig|6666666.67501.peg.2160 CDS gi|393401708|dbj|AP012284.1| 2263011 2261290 -3 - 1722 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.67501.peg.2161 CDS gi|393401708|dbj|AP012284.1| 2264740 2263715 -1 - 1026 hypothetical protein - none -
fig|6666666.67501.peg.2162 CDS gi|393401708|dbj|AP012284.1| 2268848 2265195 -2 - 3654 hypothetical protein - none -
fig|6666666.67501.peg.2163 CDS gi|393401708|dbj|AP012284.1| 2269663 2268845 -1 - 819 Putative surface anchored protein - none -
fig|6666666.67501.peg.2164 CDS gi|393401708|dbj|AP012284.1| 2270622 2269663 -3 - 960 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67501.peg.2165 CDS gi|393401708|dbj|AP012284.1| 2270526 2270663 3 + 138 hypothetical protein - none -
fig|6666666.67501.peg.2166 CDS gi|393401708|dbj|AP012284.1| 2272400 2270856 -2 - 1545 Fimbrial subunit type 2 precursor - none -
fig|6666666.67501.peg.2167 CDS gi|393401708|dbj|AP012284.1| 2272676 2272551 -2 - 126 hypothetical protein - none -
fig|6666666.67501.peg.2168 CDS gi|393401708|dbj|AP012284.1| 2273090 2273977 2 + 888 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67501.peg.2169 CDS gi|393401708|dbj|AP012284.1| 2276631 2274082 -3 - 2550 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67501.peg.2170 CDS gi|393401708|dbj|AP012284.1| 2276981 2277787 2 + 807 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67501.peg.2171 CDS gi|393401708|dbj|AP012284.1| 2277793 2279379 1 + 1587 hypothetical protein - none -
fig|6666666.67501.peg.2172 CDS gi|393401708|dbj|AP012284.1| 2279582 2280409 2 + 828 chromosome partition protein - none -
fig|6666666.67501.peg.2173 CDS gi|393401708|dbj|AP012284.1| 2280721 2281665 1 + 945 chromosome partition protein - none -
fig|6666666.67501.peg.2174 CDS gi|393401708|dbj|AP012284.1| 2281807 2281953 1 + 147 hypothetical protein - none -
fig|6666666.67501.peg.2175 CDS gi|393401708|dbj|AP012284.1| 2283435 2282086 -3 - 1350 FIG00549883: hypothetical protein - none -
fig|6666666.67501.peg.2176 CDS gi|393401708|dbj|AP012284.1| 2284266 2284973 3 + 708 hypothetical protein - none -
fig|6666666.67501.peg.2177 CDS gi|393401708|dbj|AP012284.1| 2285086 2286216 1 + 1131 hypothetical protein - none -
fig|6666666.67501.peg.2178 CDS gi|393401708|dbj|AP012284.1| 2287584 2286310 -3 - 1275 ABC-type transporter, permease component - none -
fig|6666666.67501.peg.2179 CDS gi|393401708|dbj|AP012284.1| 2288321 2287584 -2 - 738 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67501.peg.2180 CDS gi|393401708|dbj|AP012284.1| 2290112 2288322 -2 - 1791 hypothetical protein - none -
fig|6666666.67501.peg.2181 CDS gi|393401708|dbj|AP012284.1| 2291277 2290450 -3 - 828 Putative hydrolase - none -
fig|6666666.67501.peg.2182 CDS gi|393401708|dbj|AP012284.1| 2291632 2292723 1 + 1092 hypothetical protein - none -
fig|6666666.67501.peg.2183 CDS gi|393401708|dbj|AP012284.1| 2293877 2292720 -2 - 1158 Alcohol dehydrogenase (EC 1.1.1.1) Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.2184 CDS gi|393401708|dbj|AP012284.1| 2295414 2293894 -3 - 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67501.peg.2185 CDS gi|393401708|dbj|AP012284.1| 2295788 2296432 2 + 645 Putative membrane anchored protein - none -
fig|6666666.67501.peg.2186 CDS gi|393401708|dbj|AP012284.1| 2296611 2297849 3 + 1239 Secreted Endo-beta-N-acetylglucosaminidase (EndoS) - none -
fig|6666666.67501.peg.2187 CDS gi|393401708|dbj|AP012284.1| 2298350 2297949 -2 - 402 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67501.peg.2188 CDS gi|393401708|dbj|AP012284.1| 2299560 2298370 -3 - 1191 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67501.peg.2189 CDS gi|393401708|dbj|AP012284.1| 2300364 2299720 -3 - 645 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67501.peg.2190 CDS gi|393401708|dbj|AP012284.1| 2302193 2300361 -2 - 1833 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67501.peg.2191 CDS gi|393401708|dbj|AP012284.1| 2308062 2302504 -3 - 5559 Putative surface-anchored membrane protein - none -
fig|6666666.67501.peg.2192 CDS gi|393401708|dbj|AP012284.1| 2308790 2308065 -2 - 726 potential surface-anchored protein - none -
fig|6666666.67501.peg.2193 CDS gi|393401708|dbj|AP012284.1| 2309712 2308825 -3 - 888 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67501.peg.2194 CDS gi|393401708|dbj|AP012284.1| 2310055 2311416 1 + 1362 putative integral membrane protein - none -
fig|6666666.67501.peg.2195 CDS gi|393401708|dbj|AP012284.1| 2312123 2311458 -2 - 666 Putative ABC transport system, ATP-binding subunit - none -
fig|6666666.67501.peg.2196 CDS gi|393401708|dbj|AP012284.1| 2313792 2312116 -3 - 1677 ABC peptide transporter, ATP-binding component - none -
fig|6666666.67501.peg.2197 CDS gi|393401708|dbj|AP012284.1| 2314780 2313785 -1 - 996 dipeptide/oligopeptide ABC transporter, permease protein - none -
fig|6666666.67501.peg.2198 CDS gi|393401708|dbj|AP012284.1| 2316499 2314859 -1 - 1641 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.67501.peg.2199 CDS gi|393401708|dbj|AP012284.1| 2318464 2316860 -1 - 1605 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67501.peg.2200 CDS gi|393401708|dbj|AP012284.1| 2318722 2318606 -1 - 117 hypothetical protein - none -
fig|6666666.67501.peg.2201 CDS gi|393401708|dbj|AP012284.1| 2318703 2319203 3 + 501 Putative oxidoreductase - none -
fig|6666666.67501.peg.2202 CDS gi|393401708|dbj|AP012284.1| 2319321 2321936 3 + 2616 Fe-S oxidoreductase - none -
fig|6666666.67501.peg.2203 CDS gi|393401708|dbj|AP012284.1| 2322060 2322722 3 + 663 hypothetical protein - none -
fig|6666666.67501.peg.2204 CDS gi|393401708|dbj|AP012284.1| 2323030 2322719 -1 - 312 putative mercury resistance operon regulator MerR - none -
fig|6666666.67501.peg.2205 CDS gi|393401708|dbj|AP012284.1| 2323814 2323044 -2 - 771 ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component ABC transporter [iron.B12.siderophore.hemin]
fig|6666666.67501.peg.2206 CDS gi|393401708|dbj|AP012284.1| 2324884 2323817 -1 - 1068 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.67501.peg.2207 CDS gi|393401708|dbj|AP012284.1| 2325912 2324902 -3 - 1011 periplasmic binding protein - none -
fig|6666666.67501.peg.2208 CDS gi|393401708|dbj|AP012284.1| 2326289 2326167 -2 - 123 hypothetical protein - none -
fig|6666666.67501.peg.2209 CDS gi|393401708|dbj|AP012284.1| 2327465 2326587 -2 - 879 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67501.peg.2210 CDS gi|393401708|dbj|AP012284.1| 2328080 2327466 -2 - 615 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67501.peg.2211 CDS gi|393401708|dbj|AP012284.1| 2328826 2328107 -1 - 720 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67501.peg.2212 CDS gi|393401708|dbj|AP012284.1| 2329283 2328807 -2 - 477 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67501.peg.2213 CDS gi|393401708|dbj|AP012284.1| 2331124 2329415 -1 - 1710 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67501.peg.2214 CDS gi|393401708|dbj|AP012284.1| 2331502 2331191 -1 - 312 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67501.peg.2215 CDS gi|393401708|dbj|AP012284.1| 2331834 2331532 -3 - 303 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67501.peg.2216 CDS gi|393401708|dbj|AP012284.1| 2333150 2331996 -2 - 1155 hypothetical protein - none -
fig|6666666.67501.peg.2217 CDS gi|393401708|dbj|AP012284.1| 2333955 2335241 3 + 1287 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67501.peg.2218 CDS gi|393401708|dbj|AP012284.1| 2335270 2336748 1 + 1479 FIG00997783: hypothetical protein - none -
fig|6666666.67501.peg.2219 CDS gi|393401708|dbj|AP012284.1| 2336807 2340025 2 + 3219 Putative membrane protein found fused to lysyl-tRNA synthetase like protein / Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein tRNA aminoacylation, Lys;
tRNA aminoacylation, Lys
fig|6666666.67501.peg.2220 CDS gi|393401708|dbj|AP012284.1| 2340662 2339988 -2 - 675 hypothetical protein - none -
fig|6666666.67501.peg.2221 CDS gi|393401708|dbj|AP012284.1| 2341287 2340622 -3 - 666 Putative integral membrane protein - none -
fig|6666666.67501.peg.2222 CDS gi|393401708|dbj|AP012284.1| 2341482 2341297 -3 - 186 hypothetical protein - none -
fig|6666666.67501.peg.2223 CDS gi|393401708|dbj|AP012284.1| 2342821 2341514 -1 - 1308 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67501.peg.2224 CDS gi|393401708|dbj|AP012284.1| 2343392 2342826 -2 - 567 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) - none -
fig|6666666.67501.peg.2225 CDS gi|393401708|dbj|AP012284.1| 2343728 2343877 2 + 150 hypothetical protein - none -
fig|6666666.67501.peg.2226 CDS gi|393401708|dbj|AP012284.1| 2345313 2343922 -3 - 1392 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67501.peg.2227 CDS gi|393401708|dbj|AP012284.1| 2346050 2345433 -2 - 618 hypothetical protein - none -
fig|6666666.67501.peg.2228 CDS gi|393401708|dbj|AP012284.1| 2347782 2346055 -3 - 1728 FIG00548655: hypothetical protein - none -
fig|6666666.67501.peg.2229 CDS gi|393401708|dbj|AP012284.1| 2349475 2347775 -1 - 1701 ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.2230 CDS gi|393401708|dbj|AP012284.1| 2350937 2349465 -2 - 1473 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.67501.peg.2231 CDS gi|393401708|dbj|AP012284.1| 2351256 2351447 3 + 192 hypothetical protein - none -
fig|6666666.67501.peg.2232 CDS gi|393401708|dbj|AP012284.1| 2352213 2351623 -3 - 591 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.67501.peg.2233 CDS gi|393401708|dbj|AP012284.1| 2354221 2352560 -1 - 1662 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67501.peg.2234 CDS gi|393401708|dbj|AP012284.1| 2355541 2354414 -1 - 1128 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.67501.peg.2235 CDS gi|393401708|dbj|AP012284.1| 2355576 2355764 3 + 189 Putative secreted protein - none -
fig|6666666.67501.peg.2236 CDS gi|393401708|dbj|AP012284.1| 2355830 2359051 2 + 3222 Conserved putative integral membrane protein - none -
fig|6666666.67501.peg.2237 CDS gi|393401708|dbj|AP012284.1| 2360179 2359109 -1 - 1071 Lysophospholipid acyltransferase - none -
fig|6666666.67501.peg.2238 CDS gi|393401708|dbj|AP012284.1| 2360217 2361407 3 + 1191 FIG00547617: hypothetical protein - none -
fig|6666666.67501.peg.2239 CDS gi|393401708|dbj|AP012284.1| 2361409 2362878 1 + 1470 FIG00547077: hypothetical protein - none -
fig|6666666.67501.peg.2240 CDS gi|393401708|dbj|AP012284.1| 2363941 2364708 1 + 768 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67501.peg.2241 CDS gi|393401708|dbj|AP012284.1| 2366578 2364743 -1 - 1836 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67501.peg.2242 CDS gi|393401708|dbj|AP012284.1| 2367130 2367903 1 + 774 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67501.peg.2243 CDS gi|393401708|dbj|AP012284.1| 2367904 2368563 1 + 660 FIG01001556: hypothetical protein - none -
fig|6666666.67501.peg.2244 CDS gi|393401708|dbj|AP012284.1| 2368575 2371193 3 + 2619 Transmembrane transport protein MmpL5 - none -
fig|6666666.67501.peg.2245 CDS gi|393401708|dbj|AP012284.1| 2371240 2372268 1 + 1029 hypothetical protein - none -
fig|6666666.67501.peg.2246 CDS gi|393401708|dbj|AP012284.1| 2372265 2372612 3 + 348 FIG00544939: hypothetical protein - none -
fig|6666666.67501.peg.2247 CDS gi|393401708|dbj|AP012284.1| 2372778 2373368 3 + 591 hypothetical protein - none -
fig|6666666.67501.peg.2248 CDS gi|393401708|dbj|AP012284.1| 2373490 2374131 1 + 642 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67501.peg.2249 CDS gi|393401708|dbj|AP012284.1| 2375749 2374196 -1 - 1554 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67501.peg.2250 CDS gi|393401708|dbj|AP012284.1| 2380611 2375773 -3 - 4839 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67501.peg.2251 CDS gi|393401708|dbj|AP012284.1| 2382669 2380822 -3 - 1848 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.67501.peg.2252 CDS gi|393401708|dbj|AP012284.1| 2383878 2382952 -3 - 927 hypothetical protein Rv3802c - none -
fig|6666666.67501.peg.2253 CDS gi|393401708|dbj|AP012284.1| 2384411 2383884 -2 - 528 FIG00544389: hypothetical protein - none -
fig|6666666.67501.peg.2254 CDS gi|393401708|dbj|AP012284.1| 2386345 2384411 -1 - 1935 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67501.peg.2255 CDS gi|393401708|dbj|AP012284.1| 2388033 2386711 -3 - 1323 putative membrane protein - none -
fig|6666666.67501.peg.2256 CDS gi|393401708|dbj|AP012284.1| 2389197 2388172 -3 - 1026 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67501.peg.2257 CDS gi|393401708|dbj|AP012284.1| 2391374 2389443 -2 - 1932 hypothetical protein Rv3805c - none -
fig|6666666.67501.peg.2258 CDS gi|393401708|dbj|AP012284.1| 2392517 2391537 -2 - 981 putative membrane protein - none -
fig|6666666.67501.peg.2259 CDS gi|393401708|dbj|AP012284.1| 2393024 2392518 -2 - 507 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67501.peg.2260 CDS gi|393401708|dbj|AP012284.1| 2395008 2393017 -3 - 1992 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67501.peg.2261 CDS gi|393401708|dbj|AP012284.1| 2395275 2396630 3 + 1356 FIG00545828: hypothetical protein - none -
fig|6666666.67501.peg.2262 CDS gi|393401708|dbj|AP012284.1| 2397133 2396627 -1 - 507 Putative conserved integral membrane protein - none -
fig|6666666.67501.peg.2263 CDS gi|393401708|dbj|AP012284.1| 2397276 2397115 -3 - 162 hypothetical protein - none -
fig|6666666.67501.peg.2264 CDS gi|393401708|dbj|AP012284.1| 2398442 2397345 -2 - 1098 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67501.peg.2265 CDS gi|393401708|dbj|AP012284.1| 2399887 2398517 -1 - 1371 Glycerol-3-phosphate transporter Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67501.peg.2266 CDS gi|393401708|dbj|AP012284.1| 2401520 2400324 -2 - 1197 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67501.peg.2267 CDS gi|393401708|dbj|AP012284.1| 2402400 2401624 -3 - 777 putative iron ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.2268 CDS gi|393401708|dbj|AP012284.1| 2403388 2402402 -1 - 987 ABC-type transporter, permease component - none -
fig|6666666.67501.peg.2269 CDS gi|393401708|dbj|AP012284.1| 2404461 2403448 -3 - 1014 hypothetical protein - none -
fig|6666666.67501.peg.2270 CDS gi|393401708|dbj|AP012284.1| 2404937 2406958 2 + 2022 FIG00544841: hypothetical protein - none -
fig|6666666.67501.peg.2271 CDS gi|393401708|dbj|AP012284.1| 2407849 2407034 -1 - 816 Cof family hydrolase - none -
fig|6666666.67501.peg.2272 CDS gi|393401708|dbj|AP012284.1| 2408865 2408017 -3 - 849 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67501.peg.2273 CDS gi|393401708|dbj|AP012284.1| 2410167 2408884 -3 - 1284 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67501.peg.2274 CDS gi|393401708|dbj|AP012284.1| 2410208 2410981 2 + 774 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.67501.peg.2275 CDS gi|393401708|dbj|AP012284.1| 2411002 2412015 1 + 1014 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67501.peg.2276 CDS gi|393401708|dbj|AP012284.1| 2412015 2412362 3 + 348 FIG00999549: hypothetical protein - none -
fig|6666666.67501.peg.2277 CDS gi|393401708|dbj|AP012284.1| 2413047 2412391 -3 - 657 putative phosphoglycerate mutase - none -
fig|6666666.67501.peg.2278 CDS gi|393401708|dbj|AP012284.1| 2413983 2413060 -3 - 924 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67501.peg.2279 CDS gi|393401708|dbj|AP012284.1| 2414019 2415167 3 + 1149 putative amidase - none -
fig|6666666.67501.peg.2280 CDS gi|393401708|dbj|AP012284.1| 2415164 2415925 2 + 762 Putative conserved integral membrane protein - none -
fig|6666666.67501.peg.2281 CDS gi|393401708|dbj|AP012284.1| 2415976 2417256 1 + 1281 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67501.peg.2282 CDS gi|393401708|dbj|AP012284.1| 2418447 2417359 -3 - 1089 hypothetical protein - none -
fig|6666666.67501.peg.2283 CDS gi|393401708|dbj|AP012284.1| 2420408 2418459 -2 - 1950 hypothetical protein - none -
fig|6666666.67501.peg.2284 CDS gi|393401708|dbj|AP012284.1| 2421797 2420673 -2 - 1125 sodium/alanine symporter family protein - none -
fig|6666666.67501.peg.2285 CDS gi|393401708|dbj|AP012284.1| 2422231 2421761 -1 - 471 sodium/alanine symporter family protein - none -
fig|6666666.67501.peg.2286 CDS gi|393401708|dbj|AP012284.1| 2423306 2422395 -2 - 912 FIG00996178: hypothetical protein - none -
fig|6666666.67501.peg.2287 CDS gi|393401708|dbj|AP012284.1| 2424089 2423370 -2 - 720 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67501.peg.2288 CDS gi|393401708|dbj|AP012284.1| 2425432 2424218 -1 - 1215 Nucleoside permease NupC - none -
fig|6666666.67501.peg.2289 CDS gi|393401708|dbj|AP012284.1| 2425914 2425444 -3 - 471 Cytidine deaminase (EC 3.5.4.5) - none -
fig|6666666.67501.peg.2290 CDS gi|393401708|dbj|AP012284.1| 2426111 2427397 2 + 1287 Thymidine phosphorylase (EC 2.4.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67501.peg.2291 CDS gi|393401708|dbj|AP012284.1| 2428499 2427549 -2 - 951 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.67501.peg.2292 CDS gi|393401708|dbj|AP012284.1| 2428822 2428673 -1 - 150 hypothetical protein - none -
fig|6666666.67501.peg.2293 CDS gi|393401708|dbj|AP012284.1| 2429448 2428774 -3 - 675 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67501.peg.2294 CDS gi|393401708|dbj|AP012284.1| 2429823 2430425 3 + 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67501.peg.2295 CDS gi|393401708|dbj|AP012284.1| 2430761 2431345 2 + 585 FMN reductase, NADPH-dependent - none -
fig|6666666.67501.peg.2296 CDS gi|393401708|dbj|AP012284.1| 2432261 2431320 -2 - 942 transcriptional regulator, LysR family - none -
fig|6666666.67501.peg.2297 CDS gi|393401708|dbj|AP012284.1| 2432337 2433548 3 + 1212 putative transport protein - none -
fig|6666666.67501.peg.2298 CDS gi|393401708|dbj|AP012284.1| 2433657 2435480 3 + 1824 FIG00748724: hypothetical protein - none -
fig|6666666.67501.peg.2299 CDS gi|393401708|dbj|AP012284.1| 2435521 2435841 1 + 321 hypothetical protein - none -
fig|6666666.67501.peg.2300 CDS gi|393401708|dbj|AP012284.1| 2435956 2435822 -1 - 135 hypothetical protein - none -
fig|6666666.67501.peg.2301 CDS gi|393401708|dbj|AP012284.1| 2436436 2436774 1 + 339 hypothetical protein - none -
fig|6666666.67501.peg.2302 CDS gi|393401708|dbj|AP012284.1| 2438167 2436851 -1 - 1317 putative membrane protein - none -
fig|6666666.67501.peg.2303 CDS gi|393401708|dbj|AP012284.1| 2439811 2438264 -1 - 1548 FIG00544355: hypothetical protein - none -
fig|6666666.67501.peg.2304 CDS gi|393401708|dbj|AP012284.1| 2439975 2440607 3 + 633 FIG071084: hypothetical protein - none -
fig|6666666.67501.peg.2305 CDS gi|393401708|dbj|AP012284.1| 2441147 2441467 2 + 321 FIG00545047: hypothetical protein - none -
fig|6666666.67501.peg.2306 CDS gi|393401708|dbj|AP012284.1| 2442162 2441524 -3 - 639 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.2307 CDS gi|393401708|dbj|AP012284.1| 2443623 2442298 -3 - 1326 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.2308 CDS gi|393401708|dbj|AP012284.1| 2443622 2444194 2 + 573 FIG00544353: hypothetical protein - none -
fig|6666666.67501.peg.2309 CDS gi|393401708|dbj|AP012284.1| 2444424 2444272 -3 - 153 FIG060545: short hypothetical protein - none -
fig|6666666.67501.peg.2310 CDS gi|393401708|dbj|AP012284.1| 2445195 2444425 -3 - 771 FIG054872: Sortase-like protein - none -
fig|6666666.67501.peg.2311 CDS gi|393401708|dbj|AP012284.1| 2445489 2446700 3 + 1212 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67501.peg.2312 CDS gi|393401708|dbj|AP012284.1| 2447323 2446697 -1 - 627 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.2313 CDS gi|393401708|dbj|AP012284.1| 2447503 2448231 1 + 729 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.67501.peg.2314 CDS gi|393401708|dbj|AP012284.1| 2448545 2448288 -2 - 258 FIG00545001: hypothetical protein - none -
fig|6666666.67501.peg.2315 CDS gi|393401708|dbj|AP012284.1| 2449796 2448897 -2 - 900 Universal stress protein family - none -
fig|6666666.67501.peg.2316 CDS gi|393401708|dbj|AP012284.1| 2450154 2450011 -3 - 144 hypothetical protein - none -
fig|6666666.67501.peg.2317 CDS gi|393401708|dbj|AP012284.1| 2450147 2451130 2 + 984 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67501.peg.2319 CDS gi|393401708|dbj|AP012284.1| 2456718 2456578 -3 - 141 hypothetical protein - none -
fig|6666666.67501.peg.2320 CDS gi|393401708|dbj|AP012284.1| 2458241 2457195 -2 - 1047 hypothetical protein - none -
fig|6666666.67501.peg.2321 CDS gi|393401708|dbj|AP012284.1| 2459112 2458234 -3 - 879 putative ABC transporter ATP-binding protein - none -
fig|6666666.67501.peg.2322 CDS gi|393401708|dbj|AP012284.1| 2459483 2459109 -2 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.67501.peg.2323 CDS gi|393401708|dbj|AP012284.1| 2459733 2461115 3 + 1383 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67501.peg.2324 CDS gi|393401708|dbj|AP012284.1| 2462091 2461219 -3 - 873 FIG00544174: hypothetical protein - none -
fig|6666666.67501.peg.2325 CDS gi|393401708|dbj|AP012284.1| 2463078 2462710 -3 - 369 Thioredoxin - none -
fig|6666666.67501.peg.2326 CDS gi|393401708|dbj|AP012284.1| 2463304 2463507 1 + 204 Copper chaperone Copper homeostasis
fig|6666666.67501.peg.2327 CDS gi|393401708|dbj|AP012284.1| 2463642 2465933 3 + 2292 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67501.peg.2328 CDS gi|393401708|dbj|AP012284.1| 2466528 2466247 -3 - 282 Mobile element protein - none -
fig|6666666.67501.peg.2329 CDS gi|393401708|dbj|AP012284.1| 2466604 2466491 -1 - 114 transposase for insertion sequence - none -
fig|6666666.67501.peg.2330 CDS gi|393401708|dbj|AP012284.1| 2466848 2467639 2 + 792 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) - none -
fig|6666666.67501.peg.2331 CDS gi|393401708|dbj|AP012284.1| 2468628 2468807 3 + 180 hypothetical protein - none -
fig|6666666.67501.peg.2332 CDS gi|393401708|dbj|AP012284.1| 2469245 2469919 2 + 675 hypothetical protein - none -
fig|6666666.67501.peg.2333 CDS gi|393401708|dbj|AP012284.1| 2470311 2471576 3 + 1266 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67501.peg.2334 CDS gi|393401708|dbj|AP012284.1| 2473062 2471584 -3 - 1479 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67501.peg.2335 CDS gi|393401708|dbj|AP012284.1| 2475109 2473145 -1 - 1965 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.67501.peg.2336 CDS gi|393401708|dbj|AP012284.1| 2476206 2475754 -3 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67501.peg.2337 CDS gi|393401708|dbj|AP012284.1| 2476873 2476307 -1 - 567 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67501.peg.2338 CDS gi|393401708|dbj|AP012284.1| 2477308 2477021 -1 - 288 SSU ribosomal protein S6p - none -
fig|6666666.67501.peg.2339 CDS gi|393401708|dbj|AP012284.1| 2477797 2477615 -1 - 183 hypothetical protein - none -
fig|6666666.67501.peg.2340 CDS gi|393401708|dbj|AP012284.1| 2478918 2477797 -3 - 1122 putative membrane protein - none -
fig|6666666.67501.peg.2341 CDS gi|393401708|dbj|AP012284.1| 2481832 2479562 -1 - 2271 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67501.peg.2342 CDS gi|393401708|dbj|AP012284.1| 2482412 2482026 -2 - 387 hypothetical protein - none -
fig|6666666.67501.peg.2343 CDS gi|393401708|dbj|AP012284.1| 2482643 2483104 2 + 462 Transcriptional regulator, MarR family - none -
fig|6666666.67501.peg.2344 CDS gi|393401708|dbj|AP012284.1| 2483850 2483143 -3 - 708 hypothetical protein - none -
fig|6666666.67501.peg.2345 CDS gi|393401708|dbj|AP012284.1| 2483804 2484166 2 + 363 Universal stress protein family - none -
fig|6666666.67501.peg.2346 CDS gi|393401708|dbj|AP012284.1| 2484211 2484879 1 + 669 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67501.peg.2347 CDS gi|393401708|dbj|AP012284.1| 2484911 2485384 2 + 474 hypothetical membrane protein - none -
fig|6666666.67501.peg.2348 CDS gi|393401708|dbj|AP012284.1| 2486332 2485394 -1 - 939 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67501.peg.2349 CDS gi|393401708|dbj|AP012284.1| 2486569 2487228 1 + 660 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67501.peg.2350 CDS gi|393401708|dbj|AP012284.1| 2487463 2489643 1 + 2181 hypothetical protein - none -
fig|6666666.67501.peg.2351 CDS gi|393401708|dbj|AP012284.1| 2490242 2489751 -2 - 492 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.67501.peg.2352 CDS gi|393401708|dbj|AP012284.1| 2490317 2491126 2 + 810 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67501.peg.2353 CDS gi|393401708|dbj|AP012284.1| 2491190 2492692 2 + 1503 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67501.peg.2354 CDS gi|393401708|dbj|AP012284.1| 2493210 2492689 -3 - 522 hypothetical protein - none -
fig|6666666.67501.peg.2355 CDS gi|393401708|dbj|AP012284.1| 2495331 2493388 -3 - 1944 hypothetical protein - none -
fig|6666666.67501.peg.2356 CDS gi|393401708|dbj|AP012284.1| 2495841 2496350 3 + 510 hypothetical protein - none -
fig|6666666.67501.peg.2357 CDS gi|393401708|dbj|AP012284.1| 2499317 2496417 -2 - 2901 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67501.peg.2358 CDS gi|393401708|dbj|AP012284.1| 2499584 2499709 2 + 126 hypothetical protein - none -
fig|6666666.67501.peg.2359 CDS gi|393401708|dbj|AP012284.1| 2501251 2500568 -1 - 684 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.67501.peg.2360 CDS gi|393401708|dbj|AP012284.1| 2502300 2501248 -3 - 1053 hypothetical protein - none -
fig|6666666.67501.peg.2361 CDS gi|393401708|dbj|AP012284.1| 2505034 2502491 -1 - 2544 hypothetical protein - none -
fig|6666666.67501.peg.2362 CDS gi|393401708|dbj|AP012284.1| 2505265 2506500 1 + 1236 two-component system histidine kinase ChrS - none -
fig|6666666.67501.peg.2363 CDS gi|393401708|dbj|AP012284.1| 2506497 2507096 3 + 600 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67501.peg.2364 CDS gi|393401708|dbj|AP012284.1| 2508127 2507093 -1 - 1035 hypothetical protein - none -
fig|6666666.67501.peg.2365 CDS gi|393401708|dbj|AP012284.1| 2508794 2508204 -2 - 591 Conserved integral membrane protein - none -
fig|6666666.67501.peg.2366 CDS gi|393401708|dbj|AP012284.1| 2512173 2508868 -3 - 3306 hypothetical protein - none -
fig|6666666.67501.peg.2367 CDS gi|393401708|dbj|AP012284.1| 2513324 2512545 -2 - 780 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67501.peg.2368 CDS gi|393401708|dbj|AP012284.1| 2514488 2513337 -2 - 1152 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67501.peg.2369 CDS gi|393401708|dbj|AP012284.1| 2515193 2514501 -2 - 693 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.67501.peg.2370 CDS gi|393401708|dbj|AP012284.1| 2516143 2515229 -1 - 915 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.67501.peg.2371 CDS gi|393401708|dbj|AP012284.1| 2516913 2516140 -3 - 774 Transcriptional regulator, GntR family - none -
fig|6666666.67501.peg.2372 CDS gi|393401708|dbj|AP012284.1| 2517288 2518910 3 + 1623 Putative transport system secreted protein - none -
fig|6666666.67501.peg.2373 CDS gi|393401708|dbj|AP012284.1| 2519324 2520289 2 + 966 ABC-type transporter, permease component - none -
fig|6666666.67501.peg.2374 CDS gi|393401708|dbj|AP012284.1| 2520289 2522322 1 + 2034 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67501.peg.2375 CDS gi|393401708|dbj|AP012284.1| 2522319 2523152 3 + 834 FIG00547092: hypothetical protein - none -
fig|6666666.67501.peg.2376 CDS gi|393401708|dbj|AP012284.1| 2523179 2524102 2 + 924 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67501.peg.2377 CDS gi|393401708|dbj|AP012284.1| 2524632 2524216 -3 - 417 hypothetical protein - none -
fig|6666666.67501.peg.2378 CDS gi|393401708|dbj|AP012284.1| 2526325 2525075 -1 - 1251 FIG00546601: hypothetical protein - none -
fig|6666666.67501.peg.2379 CDS gi|393401708|dbj|AP012284.1| 2527799 2526345 -2 - 1455 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67501.peg.2380 CDS gi|393401708|dbj|AP012284.1| 2529144 2527810 -3 - 1335 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.67501.peg.2381 CDS gi|393401708|dbj|AP012284.1| 2529292 2530839 1 + 1548 regulatory protein - none -
fig|6666666.67501.peg.2382 CDS gi|393401708|dbj|AP012284.1| 2532218 2530854 -2 - 1365 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67501.peg.2383 CDS gi|393401708|dbj|AP012284.1| 2533757 2532231 -2 - 1527 amino acid transporter, putative - none -
fig|6666666.67501.peg.2384 CDS gi|393401708|dbj|AP012284.1| 2534658 2533750 -3 - 909 FIG00549302: hypothetical protein - none -
fig|6666666.67501.peg.2385 CDS gi|393401708|dbj|AP012284.1| 2536145 2534661 -2 - 1485 Monoamine/putrescine oxidase (EC 1.4.3.10) Putrescine utilization pathways
fig|6666666.67501.peg.2386 CDS gi|393401708|dbj|AP012284.1| 2536295 2536969 2 + 675 Transcriptional regulator, TetR family - none -
fig|6666666.67501.peg.2387 CDS gi|393401708|dbj|AP012284.1| 2537712 2536993 -3 - 720 hypothetical protein - none -
fig|6666666.67501.peg.2388 CDS gi|393401708|dbj|AP012284.1| 2537826 2538464 3 + 639 hypothetical protein - none -
fig|6666666.67501.peg.2389 CDS gi|393401708|dbj|AP012284.1| 2540065 2538572 -1 - 1494 ATP-dependent Zn protease - none -
fig|6666666.67501.peg.2390 CDS gi|393401708|dbj|AP012284.1| 2540438 2540259 -2 - 180 hypothetical protein - none -
fig|6666666.67501.peg.2391 CDS gi|393401708|dbj|AP012284.1| 2541706 2540600 -1 - 1107 hypothetical protein - none -
fig|6666666.67501.peg.2392 CDS gi|393401708|dbj|AP012284.1| 2542713 2541802 -3 - 912 hypothetical protein - none -
fig|6666666.67501.peg.2393 CDS gi|393401708|dbj|AP012284.1| 2544184 2542874 -1 - 1311 putative transmembrane symporter - none -
fig|6666666.67501.peg.2394 CDS gi|393401708|dbj|AP012284.1| 2544708 2545841 3 + 1134 Phytoene synthase (EC 2.5.1.32) - none -
fig|6666666.67501.peg.2395 CDS gi|393401708|dbj|AP012284.1| 2545896 2547530 3 + 1635 Phytoene dehydrogenase (EC 1.14.99.-) - none -
fig|6666666.67501.peg.2396 CDS gi|393401708|dbj|AP012284.1| 2547573 2548055 3 + 483 Putative integral membrane protein - none -
fig|6666666.67501.peg.2397 CDS gi|393401708|dbj|AP012284.1| 2548260 2549879 3 + 1620 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67501.peg.2398 CDS gi|393401708|dbj|AP012284.1| 2549876 2550523 2 + 648 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67501.peg.2399 CDS gi|393401708|dbj|AP012284.1| 2550568 2551593 1 + 1026 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67501.peg.2400 CDS gi|393401708|dbj|AP012284.1| 2551583 2553073 2 + 1491 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67501.peg.2401 CDS gi|393401708|dbj|AP012284.1| 2553323 2553445 2 + 123 hypothetical protein - none -
fig|6666666.67501.peg.2402 CDS gi|393401708|dbj|AP012284.1| 2553497 2554747 2 + 1251 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67501.peg.2403 CDS gi|393401708|dbj|AP012284.1| 2554750 2555589 1 + 840 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67501.peg.2404 CDS gi|393401708|dbj|AP012284.1| 2555834 2556184 2 + 351 Putative iron-sulphur protein - none -
fig|6666666.67501.peg.2405 CDS gi|393401708|dbj|AP012284.1| 2556237 2557205 3 + 969 Sodium - Bile acid symporter - none -
fig|6666666.67501.peg.2406 CDS gi|393401708|dbj|AP012284.1| 2557260 2557544 3 + 285 hypothetical protein - none -
fig|6666666.67501.peg.2407 CDS gi|393401708|dbj|AP012284.1| 2557980 2557627 -3 - 354 hypothetical membrane protein - none -
fig|6666666.67501.peg.2408 CDS gi|393401708|dbj|AP012284.1| 2558735 2557977 -2 - 759 Branched-chain amino acid transport protein azlC - none -
fig|6666666.67501.peg.2409 CDS gi|393401708|dbj|AP012284.1| 2559434 2558838 -2 - 597 FIG00996838: hypothetical protein - none -
fig|6666666.67501.peg.2410 CDS gi|393401708|dbj|AP012284.1| 2560992 2559460 -3 - 1533 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67501.peg.2411 CDS gi|393401708|dbj|AP012284.1| 2561252 2561127 -2 - 126 hypothetical protein - none -
fig|6666666.67501.peg.2412 CDS gi|393401708|dbj|AP012284.1| 2561470 2562549 1 + 1080 MutT/nudix family protein - none -
fig|6666666.67501.peg.2413 CDS gi|393401708|dbj|AP012284.1| 2562546 2565449 3 + 2904 probable secreted protein. - none -
fig|6666666.67501.peg.2414 CDS gi|393401708|dbj|AP012284.1| 2565659 2569087 2 + 3429 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67501.peg.2415 CDS gi|393401708|dbj|AP012284.1| 2569088 2569231 2 + 144 hypothetical protein - none -
fig|6666666.67501.peg.2416 CDS gi|393401708|dbj|AP012284.1| 2569400 2570143 2 + 744 hypothetical protein - none -
fig|6666666.67501.peg.2417 CDS gi|393401708|dbj|AP012284.1| 2570407 2570288 -1 - 120 hypothetical protein - none -
fig|6666666.67501.peg.2418 CDS gi|393401708|dbj|AP012284.1| 2570366 2571322 2 + 957 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.67501.peg.2419 CDS gi|393401708|dbj|AP012284.1| 2571353 2571676 2 + 324 Thioredoxin - none -
fig|6666666.67501.peg.2420 CDS gi|393401708|dbj|AP012284.1| 2571765 2572946 3 + 1182 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids;
Zinc regulated enzymes
fig|6666666.67501.peg.2421 CDS gi|393401708|dbj|AP012284.1| 2573665 2572997 -1 - 669 FIG007808: hypothetical protein - none -
fig|6666666.67501.peg.2422 CDS gi|393401708|dbj|AP012284.1| 2574759 2573707 -3 - 1053 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67501.peg.2423 CDS gi|393401708|dbj|AP012284.1| 2575757 2574765 -2 - 993 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67501.peg.2424 CDS gi|393401708|dbj|AP012284.1| 2576534 2575863 -2 - 672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67501.peg.2425 CDS gi|393401708|dbj|AP012284.1| 2577675 2576719 -3 - 957 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.67501.peg.2426 CDS gi|393401708|dbj|AP012284.1| 2578436 2578080 -2 - 357 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.67501.peg.2427 CDS gi|393401708|dbj|AP012284.1| 2578606 2578463 -1 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67501.rna.1 RNA gi|393401708|dbj|AP012284.1| 12617 12690 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.67501.rna.2 RNA gi|393401708|dbj|AP012284.1| 12702 12774 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67501.rna.3 RNA gi|393401708|dbj|AP012284.1| 14727 14799 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67501.rna.4 RNA gi|393401708|dbj|AP012284.1| 54094 54177 1 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.67501.rna.5 RNA gi|393401708|dbj|AP012284.1| 169554 169638 3 + 85 tRNA-Ser-TGA - none -
fig|6666666.67501.rna.6 RNA gi|393401708|dbj|AP012284.1| 170831 170919 2 + 89 tRNA-Pseudo-GCT - none -
fig|6666666.67501.rna.7 RNA gi|393401708|dbj|AP012284.1| 170967 171039 3 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.67501.rna.8 RNA gi|393401708|dbj|AP012284.1| 177493 177565 1 + 73 tRNA-Arg-ACG tRNAs
fig|6666666.67501.rna.9 RNA gi|393401708|dbj|AP012284.1| 220908 220995 3 + 88 tRNA-Ser-CGA tRNAs
fig|6666666.67501.rna.10 RNA gi|393401708|dbj|AP012284.1| 229945 229860 -1 - 86 tRNA-Pseudo-GGA - none -
fig|6666666.67501.rna.11 RNA gi|393401708|dbj|AP012284.1| 304900 304827 -1 - 74 tRNA-Pro-CGG tRNAs
fig|6666666.67501.rna.12 RNA gi|393401708|dbj|AP012284.1| 336380 336452 2 + 73 tRNA-Thr-CGT - none -
fig|6666666.67501.rna.13 RNA gi|393401708|dbj|AP012284.1| 414517 414598 1 + 82 tRNA-Tyr-GTA - none -
fig|6666666.67501.rna.14 RNA gi|393401708|dbj|AP012284.1| 414948 415020 3 + 73 tRNA-Thr-GGT - none -
fig|6666666.67501.rna.15 RNA gi|393401708|dbj|AP012284.1| 415059 415130 3 + 72 tRNA-Met-CAT - none -
fig|6666666.67501.rna.16 RNA gi|393401708|dbj|AP012284.1| 415258 415330 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.67501.rna.17 RNA gi|393401708|dbj|AP012284.1| 731543 731616 2 + 74 tRNA-Met-CAT - none -
fig|6666666.67501.rna.18 RNA gi|393401708|dbj|AP012284.1| 764766 766278 3 + 1513 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67501.rna.19 RNA gi|393401708|dbj|AP012284.1| 766648 769757 1 + 3110 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67501.rna.20 RNA gi|393401708|dbj|AP012284.1| 769852 769972 1 + 121 5S RNA - none -
fig|6666666.67501.rna.21 RNA gi|393401708|dbj|AP012284.1| 813625 813553 -1 - 73 tRNA-Arg-CCT - none -
fig|6666666.67501.rna.22 RNA gi|393401708|dbj|AP012284.1| 898744 898815 1 + 72 tRNA-Gln-TTG - none -
fig|6666666.67501.rna.23 RNA gi|393401708|dbj|AP012284.1| 910792 910865 1 + 74 tRNA-Leu-TAA - none -
fig|6666666.67501.rna.24 RNA gi|393401708|dbj|AP012284.1| 1029922 1029850 -1 - 73 tRNA-Arg-CCG tRNAs
fig|6666666.67501.rna.25 RNA gi|393401708|dbj|AP012284.1| 1123159 1123230 1 + 72 tRNA-Gln-CTG - none -
fig|6666666.67501.rna.26 RNA gi|393401708|dbj|AP012284.1| 1123264 1123336 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.67501.rna.27 RNA gi|393401708|dbj|AP012284.1| 1125718 1125790 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.67501.rna.28 RNA gi|393401708|dbj|AP012284.1| 1166896 1166969 1 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.67501.rna.29 RNA gi|393401708|dbj|AP012284.1| 1204164 1205676 3 + 1513 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67501.rna.30 RNA gi|393401708|dbj|AP012284.1| 1206046 1209155 1 + 3110 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67501.rna.31 RNA gi|393401708|dbj|AP012284.1| 1209243 1209363 3 + 121 5S RNA - none -
fig|6666666.67501.rna.32 RNA gi|393401708|dbj|AP012284.1| 1246840 1246767 -1 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.67501.rna.33 RNA gi|393401708|dbj|AP012284.1| 1331759 1331844 2 + 86 tRNA-Leu-GAG tRNAs
fig|6666666.67501.rna.34 RNA gi|393401708|dbj|AP012284.1| 1521510 1521439 -3 - 72 tRNA-Val-CAC tRNAs
fig|6666666.67501.rna.35 RNA gi|393401708|dbj|AP012284.1| 1521887 1521959 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.67501.rna.36 RNA gi|393401708|dbj|AP012284.1| 1521986 1522057 2 + 72 tRNA-Val-GAC tRNAs
fig|6666666.67501.rna.37 RNA gi|393401708|dbj|AP012284.1| 1522097 1522169 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.67501.rna.38 RNA gi|393401708|dbj|AP012284.1| 1522203 1522273 3 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.67501.rna.39 RNA gi|393401708|dbj|AP012284.1| 1522282 1522353 1 + 72 tRNA-Val-GAC tRNAs
fig|6666666.67501.rna.40 RNA gi|393401708|dbj|AP012284.1| 1522393 1522465 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.67501.rna.41 RNA gi|393401708|dbj|AP012284.1| 1852653 1852581 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.67501.rna.42 RNA gi|393401708|dbj|AP012284.1| 1860662 1860589 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.67501.rna.43 RNA gi|393401708|dbj|AP012284.1| 1860889 1860961 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.67501.rna.44 RNA gi|393401708|dbj|AP012284.1| 1965102 1965029 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.67501.rna.45 RNA gi|393401708|dbj|AP012284.1| 1965562 1965491 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.67501.rna.46 RNA gi|393401708|dbj|AP012284.1| 1997308 1997381 1 + 74 tRNA-Arg-TCT - none -
fig|6666666.67501.rna.47 RNA gi|393401708|dbj|AP012284.1| 2003363 2003435 2 + 73 tRNA-His-GTG - none -
fig|6666666.67501.rna.48 RNA gi|393401708|dbj|AP012284.1| 2005956 2006028 3 + 73 tRNA-Lys-CTT - none -
fig|6666666.67501.rna.49 RNA gi|393401708|dbj|AP012284.1| 2026527 2026446 -3 - 82 tRNA-Leu-TAG - none -
fig|6666666.67501.rna.50 RNA gi|393401708|dbj|AP012284.1| 2059062 2058990 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.67501.rna.51 RNA gi|393401708|dbj|AP012284.1| 2066985 2066865 -3 - 121 5S RNA - none -
fig|6666666.67501.rna.52 RNA gi|393401708|dbj|AP012284.1| 2070189 2067080 -3 - 3110 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67501.rna.53 RNA gi|393401708|dbj|AP012284.1| 2072071 2070559 -1 - 1513 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67501.rna.54 RNA gi|393401708|dbj|AP012284.1| 2078591 2078519 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.67501.rna.55 RNA gi|393401708|dbj|AP012284.1| 2078686 2078613 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.67501.rna.56 RNA gi|393401708|dbj|AP012284.1| 2080117 2080044 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.67501.rna.57 RNA gi|393401708|dbj|AP012284.1| 2080216 2080144 -1 - 73 tRNA-Glu-TTC - none -
fig|6666666.67501.rna.58 RNA gi|393401708|dbj|AP012284.1| 2080528 2080456 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.67501.rna.59 RNA gi|393401708|dbj|AP012284.1| 2135803 2135731 -1 - 73 tRNA-Thr-TGT - none -
fig|6666666.67501.rna.60 RNA gi|393401708|dbj|AP012284.1| 2343480 2343550 3 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.67501.rna.61 RNA gi|393401708|dbj|AP012284.1| 2451391 2451271 -1 - 121 5S RNA - none -
fig|6666666.67501.rna.62 RNA gi|393401708|dbj|AP012284.1| 2454595 2451486 -1 - 3110 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67501.rna.63 RNA gi|393401708|dbj|AP012284.1| 2456477 2454965 -2 - 1513 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -