fig|6666666.67505.peg.1 CDS gi|171850984|emb|AM942444.1| 52 1761 1 + 1710 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67505.peg.2 CDS gi|171850984|emb|AM942444.1| 2605 3789 1 + 1185 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67505.peg.3 CDS gi|171850984|emb|AM942444.1| 3823 5241 1 + 1419 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67505.peg.4 CDS gi|171850984|emb|AM942444.1| 5386 5895 1 + 510 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67505.peg.5 CDS gi|171850984|emb|AM942444.1| 6008 8080 2 + 2073 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67505.peg.6 CDS gi|171850984|emb|AM942444.1| 8391 9404 3 + 1014 FIG00544157: hypothetical protein - none -
fig|6666666.67505.peg.7 CDS gi|171850984|emb|AM942444.1| 10385 9519 -2 - 867 hypothetical protein - none -
fig|6666666.67505.peg.8 CDS gi|171850984|emb|AM942444.1| 11891 10584 -2 - 1308 glycoside hydrolase family 1 - none -
fig|6666666.67505.peg.9 CDS gi|171850984|emb|AM942444.1| 13308 11950 -3 - 1359 major facilitator superfamily MFS_1 - none -
fig|6666666.67505.peg.10 CDS gi|171850984|emb|AM942444.1| 13434 15950 3 + 2517 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67505.peg.11 CDS gi|171850984|emb|AM942444.1| 15947 16531 2 + 585 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67505.peg.12 CDS gi|171850984|emb|AM942444.1| 19635 18631 -3 - 1005 hypothetical protein - none -
fig|6666666.67505.peg.13 CDS gi|171850984|emb|AM942444.1| 20303 19632 -2 - 672 hypothetical protein - none -
fig|6666666.67505.peg.14 CDS gi|171850984|emb|AM942444.1| 20781 20650 -3 - 132 hypothetical protein - none -
fig|6666666.67505.peg.15 CDS gi|171850984|emb|AM942444.1| 22940 21117 -2 - 1824 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67505.peg.16 CDS gi|171850984|emb|AM942444.1| 23485 23003 -1 - 483 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67505.peg.17 CDS gi|171850984|emb|AM942444.1| 24780 23902 -3 - 879 hypothetical protein - none -
fig|6666666.67505.peg.18 CDS gi|171850984|emb|AM942444.1| 25629 25057 -3 - 573 Transcriptional regulator, TetR family - none -
fig|6666666.67505.peg.19 CDS gi|171850984|emb|AM942444.1| 27146 25647 -2 - 1500 major facilitator superfamily MFS_1 - none -
fig|6666666.67505.peg.20 CDS gi|171850984|emb|AM942444.1| 27418 27957 1 + 540 putative resolvase - none -
fig|6666666.67505.peg.21 CDS gi|171850984|emb|AM942444.1| 28914 29753 3 + 840 probable 5-valerolactone hydrolase - none -
fig|6666666.67505.peg.22 CDS gi|171850984|emb|AM942444.1| 29756 30559 2 + 804 oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.67505.peg.23 CDS gi|171850984|emb|AM942444.1| 30772 31110 1 + 339 FIG00545313: hypothetical protein - none -
fig|6666666.67505.peg.24 CDS gi|171850984|emb|AM942444.1| 32750 31566 -2 - 1185 Mobile element protein - none -
fig|6666666.67505.peg.25 CDS gi|171850984|emb|AM942444.1| 32994 33845 3 + 852 hypothetical protein - none -
fig|6666666.67505.peg.26 CDS gi|171850984|emb|AM942444.1| 33969 35336 3 + 1368 Cyanate MFS transporter - none -
fig|6666666.67505.peg.27 CDS gi|171850984|emb|AM942444.1| 35793 35362 -3 - 432 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.67505.peg.28 CDS gi|171850984|emb|AM942444.1| 36106 35978 -1 - 129 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.67505.peg.29 CDS gi|171850984|emb|AM942444.1| 36430 37524 1 + 1095 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67505.peg.30 CDS gi|171850984|emb|AM942444.1| 37521 37940 3 + 420 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67505.peg.31 CDS gi|171850984|emb|AM942444.1| 38148 40088 3 + 1941 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67505.peg.32 CDS gi|171850984|emb|AM942444.1| 40632 41981 3 + 1350 Mobile element protein - none -
fig|6666666.67505.peg.33 CDS gi|171850984|emb|AM942444.1| 42137 42448 2 + 312 hypothetical protein - none -
fig|6666666.67505.peg.34 CDS gi|171850984|emb|AM942444.1| 42650 43828 2 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.35 CDS gi|171850984|emb|AM942444.1| 45076 44918 -1 - 159 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.36 CDS gi|171850984|emb|AM942444.1| 46903 46244 -1 - 660 hypothetical protein - none -
fig|6666666.67505.peg.37 CDS gi|171850984|emb|AM942444.1| 48502 47798 -1 - 705 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.38 CDS gi|171850984|emb|AM942444.1| 49154 48672 -2 - 483 hypothetical protein - none -
fig|6666666.67505.peg.39 CDS gi|171850984|emb|AM942444.1| 49719 49207 -3 - 513 permease of the major facilitator superfamily - none -
fig|6666666.67505.peg.40 CDS gi|171850984|emb|AM942444.1| 50528 49674 -2 - 855 permease of the major facilitator superfamily - none -
fig|6666666.67505.peg.41 CDS gi|171850984|emb|AM942444.1| 50648 51778 2 + 1131 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Serine-glyoxylate cycle
fig|6666666.67505.peg.42 CDS gi|171850984|emb|AM942444.1| 51895 52242 1 + 348 putative mercury resistance operon regulator MerR - none -
fig|6666666.67505.peg.43 CDS gi|171850984|emb|AM942444.1| 54377 52305 -2 - 2073 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67505.peg.44 CDS gi|171850984|emb|AM942444.1| 56083 54386 -1 - 1698 FIG00546978: hypothetical protein - none -
fig|6666666.67505.peg.45 CDS gi|171850984|emb|AM942444.1| 56267 56791 2 + 525 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.46 CDS gi|171850984|emb|AM942444.1| 56799 57491 3 + 693 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.67505.peg.47 CDS gi|171850984|emb|AM942444.1| 57814 57536 -1 - 279 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67505.peg.48 CDS gi|171850984|emb|AM942444.1| 57959 58645 2 + 687 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67505.peg.49 CDS gi|171850984|emb|AM942444.1| 60853 58676 -1 - 2178 Serine/threonine-protein kinase PknB (EC 2.7.11.1) - none -
fig|6666666.67505.peg.50 CDS gi|171850984|emb|AM942444.1| 62674 61031 -1 - 1644 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67505.peg.51 CDS gi|171850984|emb|AM942444.1| 64125 62677 -3 - 1449 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.52 CDS gi|171850984|emb|AM942444.1| 65507 64122 -2 - 1386 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67505.peg.53 CDS gi|171850984|emb|AM942444.1| 67077 65509 -3 - 1569 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67505.peg.54 CDS gi|171850984|emb|AM942444.1| 67589 67074 -2 - 516 FIG00818182: hypothetical protein - none -
fig|6666666.67505.peg.55 CDS gi|171850984|emb|AM942444.1| 69006 67774 -3 - 1233 FIG00543872: hypothetical protein - none -
fig|6666666.67505.peg.56 CDS gi|171850984|emb|AM942444.1| 69518 70144 2 + 627 putative acetyltransferase - none -
fig|6666666.67505.peg.57 CDS gi|171850984|emb|AM942444.1| 71638 70187 -1 - 1452 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67505.peg.58 CDS gi|171850984|emb|AM942444.1| 73577 71664 -2 - 1914 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67505.peg.59 CDS gi|171850984|emb|AM942444.1| 74542 73577 -1 - 966 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67505.peg.60 CDS gi|171850984|emb|AM942444.1| 76254 74539 -3 - 1716 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67505.peg.61 CDS gi|171850984|emb|AM942444.1| 76490 77053 2 + 564 hypothetical protein - none -
fig|6666666.67505.peg.62 CDS gi|171850984|emb|AM942444.1| 77992 77192 -1 - 801 FIG00547049: hypothetical protein - none -
fig|6666666.67505.peg.63 CDS gi|171850984|emb|AM942444.1| 78117 79331 3 + 1215 hypothetical protein - none -
fig|6666666.67505.peg.64 CDS gi|171850984|emb|AM942444.1| 79546 80412 1 + 867 hypothetical protein - none -
fig|6666666.67505.peg.65 CDS gi|171850984|emb|AM942444.1| 81527 80535 -2 - 993 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67505.peg.66 CDS gi|171850984|emb|AM942444.1| 81700 82344 1 + 645 probable integral membrane protein - none -
fig|6666666.67505.peg.67 CDS gi|171850984|emb|AM942444.1| 82547 83257 2 + 711 hypothetical protein - none -
fig|6666666.67505.peg.68 CDS gi|171850984|emb|AM942444.1| 83346 83218 -3 - 129 hypothetical protein - none -
fig|6666666.67505.peg.69 CDS gi|171850984|emb|AM942444.1| 83353 84624 1 + 1272 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67505.peg.70 CDS gi|171850984|emb|AM942444.1| 84624 86249 3 + 1626 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67505.peg.71 CDS gi|171850984|emb|AM942444.1| 86308 87207 1 + 900 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67505.peg.72 CDS gi|171850984|emb|AM942444.1| 87207 88364 3 + 1158 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.73 CDS gi|171850984|emb|AM942444.1| 88440 89783 3 + 1344 putative transport protein - none -
fig|6666666.67505.peg.74 CDS gi|171850984|emb|AM942444.1| 89838 90587 3 + 750 Short chain dehydrogenase - none -
fig|6666666.67505.peg.75 CDS gi|171850984|emb|AM942444.1| 90760 92043 1 + 1284 hypothetical protein - none -
fig|6666666.67505.peg.76 CDS gi|171850984|emb|AM942444.1| 92174 92974 2 + 801 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67505.peg.77 CDS gi|171850984|emb|AM942444.1| 94129 93134 -1 - 996 hypothetical protein - none -
fig|6666666.67505.peg.78 CDS gi|171850984|emb|AM942444.1| 94917 94336 -3 - 582 hypothetical protein - none -
fig|6666666.67505.peg.79 CDS gi|171850984|emb|AM942444.1| 95063 95473 2 + 411 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67505.peg.80 CDS gi|171850984|emb|AM942444.1| 95470 98379 1 + 2910 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.67505.peg.81 CDS gi|171850984|emb|AM942444.1| 100962 98485 -3 - 2478 FIG00548606: hypothetical protein - none -
fig|6666666.67505.peg.82 CDS gi|171850984|emb|AM942444.1| 101706 101140 -3 - 567 carbonic anhydrase, family 3 - none -
fig|6666666.67505.peg.83 CDS gi|171850984|emb|AM942444.1| 101801 102238 2 + 438 multimeric flavodoxin WrbA - none -
fig|6666666.67505.peg.84 CDS gi|171850984|emb|AM942444.1| 102572 102252 -2 - 321 Conserved putative integral membrane protein - none -
fig|6666666.67505.peg.85 CDS gi|171850984|emb|AM942444.1| 102655 103101 1 + 447 FIG00544629: hypothetical protein - none -
fig|6666666.67505.peg.86 CDS gi|171850984|emb|AM942444.1| 103174 103452 1 + 279 transglycosylase associated protein - none -
fig|6666666.67505.peg.87 CDS gi|171850984|emb|AM942444.1| 104259 103513 -3 - 747 putative two-component system response regulator - none -
fig|6666666.67505.peg.88 CDS gi|171850984|emb|AM942444.1| 105587 104259 -2 - 1329 two-component system sensor kinase - none -
fig|6666666.67505.peg.89 CDS gi|171850984|emb|AM942444.1| 105814 105701 -1 - 114 hypothetical protein - none -
fig|6666666.67505.peg.90 CDS gi|171850984|emb|AM942444.1| 105752 106516 2 + 765 hypothetical protein - none -
fig|6666666.67505.peg.91 CDS gi|171850984|emb|AM942444.1| 109196 106581 -2 - 2616 ATP-dependent helicase HrpB - none -
fig|6666666.67505.peg.92 CDS gi|171850984|emb|AM942444.1| 109663 109307 -1 - 357 hypothetical protein - none -
fig|6666666.67505.peg.93 CDS gi|171850984|emb|AM942444.1| 110043 110729 3 + 687 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67505.peg.94 CDS gi|171850984|emb|AM942444.1| 112984 110732 -1 - 2253 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.67505.peg.95 CDS gi|171850984|emb|AM942444.1| 113105 113437 2 + 333 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67505.peg.96 CDS gi|171850984|emb|AM942444.1| 113437 114270 1 + 834 FIG00543993: hypothetical protein - none -
fig|6666666.67505.peg.97 CDS gi|171850984|emb|AM942444.1| 116316 114280 -3 - 2037 putative endopeptidase - none -
fig|6666666.67505.peg.98 CDS gi|171850984|emb|AM942444.1| 116487 117185 3 + 699 hypothetical protein - none -
fig|6666666.67505.peg.99 CDS gi|171850984|emb|AM942444.1| 117257 118180 2 + 924 FIG00547725: hypothetical protein - none -
fig|6666666.67505.peg.100 CDS gi|171850984|emb|AM942444.1| 118399 119652 1 + 1254 putative lysozyme precursor - none -
fig|6666666.67505.peg.101 CDS gi|171850984|emb|AM942444.1| 123321 119818 -3 - 3504 putative arabinosyltransferase - none -
fig|6666666.67505.peg.102 CDS gi|171850984|emb|AM942444.1| 125508 123508 -3 - 2001 putative membrane protein - none -
fig|6666666.67505.peg.103 CDS gi|171850984|emb|AM942444.1| 127086 125545 -3 - 1542 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67505.peg.104 CDS gi|171850984|emb|AM942444.1| 127334 127708 2 + 375 Transcriptional regulator, GntR family - none -
fig|6666666.67505.peg.105 CDS gi|171850984|emb|AM942444.1| 127876 128847 1 + 972 putative ABC transport system, ATP-binding protein - none -
fig|6666666.67505.peg.106 CDS gi|171850984|emb|AM942444.1| 128840 130225 2 + 1386 hypothetical protein - none -
fig|6666666.67505.peg.107 CDS gi|171850984|emb|AM942444.1| 136544 138079 2 + 1536 putative permease of the major facilitator superfamily - none -
fig|6666666.67505.peg.108 CDS gi|171850984|emb|AM942444.1| 139285 138164 -1 - 1122 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.109 CDS gi|171850984|emb|AM942444.1| 139325 139465 2 + 141 FIG00544217: hypothetical protein - none -
fig|6666666.67505.peg.110 CDS gi|171850984|emb|AM942444.1| 139606 140514 1 + 909 Universal stress protein family - none -
fig|6666666.67505.peg.111 CDS gi|171850984|emb|AM942444.1| 140606 141283 2 + 678 Transcriptional regulator, TetR family - none -
fig|6666666.67505.peg.112 CDS gi|171850984|emb|AM942444.1| 142313 141366 -2 - 948 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67505.peg.113 CDS gi|171850984|emb|AM942444.1| 142339 143133 1 + 795 FIG054872: Sortase-like protein - none -
fig|6666666.67505.peg.114 CDS gi|171850984|emb|AM942444.1| 143137 143292 1 + 156 FIG060545: short hypothetical protein - none -
fig|6666666.67505.peg.115 CDS gi|171850984|emb|AM942444.1| 144004 143372 -1 - 633 FIG00544353: hypothetical protein - none -
fig|6666666.67505.peg.116 CDS gi|171850984|emb|AM942444.1| 144387 144049 -3 - 339 FIG00545047: hypothetical protein - none -
fig|6666666.67505.peg.117 CDS gi|171850984|emb|AM942444.1| 145143 144520 -3 - 624 FIG071084: hypothetical protein - none -
fig|6666666.67505.peg.118 CDS gi|171850984|emb|AM942444.1| 145346 146977 2 + 1632 FIG00544355: hypothetical protein - none -
fig|6666666.67505.peg.119 CDS gi|171850984|emb|AM942444.1| 147018 147713 3 + 696 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67505.peg.120 CDS gi|171850984|emb|AM942444.1| 148456 147854 -1 - 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67505.peg.121 CDS gi|171850984|emb|AM942444.1| 149585 148632 -2 - 954 hypothetical protein - none -
fig|6666666.67505.peg.122 CDS gi|171850984|emb|AM942444.1| 149696 150469 2 + 774 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67505.peg.123 CDS gi|171850984|emb|AM942444.1| 150520 151437 1 + 918 FIG00996178: hypothetical protein - none -
fig|6666666.67505.peg.124 CDS gi|171850984|emb|AM942444.1| 152504 151542 -2 - 963 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67505.peg.125 CDS gi|171850984|emb|AM942444.1| 153833 153258 -2 - 576 FMN reductase, NADPH-dependent - none -
fig|6666666.67505.peg.126 CDS gi|171850984|emb|AM942444.1| 154970 153966 -2 - 1005 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67505.peg.127 CDS gi|171850984|emb|AM942444.1| 155347 155036 -1 - 312 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67505.peg.128 CDS gi|171850984|emb|AM942444.1| 155697 155969 3 + 273 hypothetical protein - none -
fig|6666666.67505.peg.129 CDS gi|171850984|emb|AM942444.1| 156768 155986 -3 - 783 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67505.peg.130 CDS gi|171850984|emb|AM942444.1| 157581 156799 -3 - 783 Putative conserved integral membrane protein - none -
fig|6666666.67505.peg.131 CDS gi|171850984|emb|AM942444.1| 158795 157578 -2 - 1218 putative amidase - none -
fig|6666666.67505.peg.132 CDS gi|171850984|emb|AM942444.1| 159023 160072 2 + 1050 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67505.peg.133 CDS gi|171850984|emb|AM942444.1| 160090 160908 1 + 819 putative phosphoglycerate mutase - none -
fig|6666666.67505.peg.134 CDS gi|171850984|emb|AM942444.1| 161287 160937 -1 - 351 FIG00544953: hypothetical protein - none -
fig|6666666.67505.peg.135 CDS gi|171850984|emb|AM942444.1| 162358 161318 -1 - 1041 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67505.peg.136 CDS gi|171850984|emb|AM942444.1| 162429 163697 3 + 1269 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67505.peg.137 CDS gi|171850984|emb|AM942444.1| 163834 164742 1 + 909 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.138 CDS gi|171850984|emb|AM942444.1| 164742 165653 3 + 912 Hydrolase (HAD superfamily) - none -
fig|6666666.67505.peg.139 CDS gi|171850984|emb|AM942444.1| 165819 167348 3 + 1530 FAD/FMN-containing dehydrogenases - none -
fig|6666666.67505.peg.140 CDS gi|171850984|emb|AM942444.1| 167491 168807 1 + 1317 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67505.peg.141 CDS gi|171850984|emb|AM942444.1| 168857 170062 2 + 1206 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67505.peg.142 CDS gi|171850984|emb|AM942444.1| 170332 170174 -1 - 159 hypothetical protein - none -
fig|6666666.67505.peg.143 CDS gi|171850984|emb|AM942444.1| 174360 171184 -3 - 3177 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.144 CDS gi|171850984|emb|AM942444.1| 174518 174363 -2 - 156 hypothetical protein - none -
fig|6666666.67505.peg.145 CDS gi|171850984|emb|AM942444.1| 175338 174649 -3 - 690 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.146 CDS gi|171850984|emb|AM942444.1| 177197 175611 -2 - 1587 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.147 CDS gi|171850984|emb|AM942444.1| 177956 177396 -2 - 561 Transcriptional regulator, TetR family - none -
fig|6666666.67505.peg.148 CDS gi|171850984|emb|AM942444.1| 178652 177978 -2 - 675 putative ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.149 CDS gi|171850984|emb|AM942444.1| 179797 178649 -1 - 1149 putative ABC transport system, permease protein - none -
fig|6666666.67505.peg.150 CDS gi|171850984|emb|AM942444.1| 180155 181021 2 + 867 Putative secreted hydrolase - none -
fig|6666666.67505.peg.151 CDS gi|171850984|emb|AM942444.1| 181241 183325 2 + 2085 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67505.peg.152 CDS gi|171850984|emb|AM942444.1| 183325 183918 1 + 594 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67505.peg.153 CDS gi|171850984|emb|AM942444.1| 183964 185016 1 + 1053 putative membrane protein - none -
fig|6666666.67505.peg.154 CDS gi|171850984|emb|AM942444.1| 185125 186141 1 + 1017 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67505.peg.155 CDS gi|171850984|emb|AM942444.1| 186470 188410 2 + 1941 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67505.peg.156 CDS gi|171850984|emb|AM942444.1| 188644 189201 1 + 558 FIG00544389: hypothetical protein - none -
fig|6666666.67505.peg.157 CDS gi|171850984|emb|AM942444.1| 189227 190177 2 + 951 hypothetical protein Rv3802c - none -
fig|6666666.67505.peg.158 CDS gi|171850984|emb|AM942444.1| 190280 192157 2 + 1878 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.159 CDS gi|171850984|emb|AM942444.1| 192236 197227 2 + 4992 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67505.peg.160 CDS gi|171850984|emb|AM942444.1| 197235 198836 3 + 1602 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67505.peg.161 CDS gi|171850984|emb|AM942444.1| 198962 200689 2 + 1728 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.162 CDS gi|171850984|emb|AM942444.1| 202039 200762 -1 - 1278 FIG00545475: hypothetical protein - none -
fig|6666666.67505.peg.163 CDS gi|171850984|emb|AM942444.1| 203480 202056 -2 - 1425 hypothetical protein - none -
fig|6666666.67505.peg.164 CDS gi|171850984|emb|AM942444.1| 203955 203464 -3 - 492 putative cholesterol esterase - none -
fig|6666666.67505.peg.165 CDS gi|171850984|emb|AM942444.1| 204537 204121 -3 - 417 FIG00544939: hypothetical protein - none -
fig|6666666.67505.peg.166 CDS gi|171850984|emb|AM942444.1| 205620 204547 -3 - 1074 Possible membrane protein - none -
fig|6666666.67505.peg.167 CDS gi|171850984|emb|AM942444.1| 208280 205620 -2 - 2661 putative integral membrane protein - none -
fig|6666666.67505.peg.168 CDS gi|171850984|emb|AM942444.1| 209019 208273 -3 - 747 FIG00546304: hypothetical protein - none -
fig|6666666.67505.peg.169 CDS gi|171850984|emb|AM942444.1| 210006 209158 -3 - 849 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67505.peg.170 CDS gi|171850984|emb|AM942444.1| 210122 210976 2 + 855 FIG00546850: hypothetical protein - none -
fig|6666666.67505.peg.171 CDS gi|171850984|emb|AM942444.1| 211046 211360 2 + 315 hypothetical protein - none -
fig|6666666.67505.peg.172 CDS gi|171850984|emb|AM942444.1| 211587 213410 3 + 1824 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67505.peg.173 CDS gi|171850984|emb|AM942444.1| 215233 213665 -1 - 1569 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.67505.peg.174 CDS gi|171850984|emb|AM942444.1| 215986 215423 -1 - 564 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.67505.peg.175 CDS gi|171850984|emb|AM942444.1| 217034 216885 -2 - 150 hypothetical protein - none -
fig|6666666.67505.peg.176 CDS gi|171850984|emb|AM942444.1| 217035 218516 3 + 1482 FIG00545619: hypothetical protein - none -
fig|6666666.67505.peg.177 CDS gi|171850984|emb|AM942444.1| 218688 218575 -3 - 114 hypothetical protein - none -
fig|6666666.67505.peg.178 CDS gi|171850984|emb|AM942444.1| 218656 220641 1 + 1986 FIG00548828: hypothetical protein - none -
fig|6666666.67505.peg.179 CDS gi|171850984|emb|AM942444.1| 223081 220811 -1 - 2271 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67505.peg.180 CDS gi|171850984|emb|AM942444.1| 224399 223170 -2 - 1230 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67505.peg.181 CDS gi|171850984|emb|AM942444.1| 225434 224529 -2 - 906 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67505.peg.182 CDS gi|171850984|emb|AM942444.1| 225458 226621 2 + 1164 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67505.peg.183 CDS gi|171850984|emb|AM942444.1| 228399 226618 -3 - 1782 FIG00547077: hypothetical protein - none -
fig|6666666.67505.peg.184 CDS gi|171850984|emb|AM942444.1| 229698 228493 -3 - 1206 FIG00547617: hypothetical protein - none -
fig|6666666.67505.peg.185 CDS gi|171850984|emb|AM942444.1| 230226 229870 -3 - 357 hypothetical protein - none -
fig|6666666.67505.peg.186 CDS gi|171850984|emb|AM942444.1| 235002 231154 -3 - 3849 Conserved putative integral membrane protein - none -
fig|6666666.67505.peg.187 CDS gi|171850984|emb|AM942444.1| 235261 235052 -1 - 210 FIG00543976: hypothetical protein - none -
fig|6666666.67505.peg.188 CDS gi|171850984|emb|AM942444.1| 235927 235361 -1 - 567 FIG00545938: hypothetical protein - none -
fig|6666666.67505.peg.189 CDS gi|171850984|emb|AM942444.1| 236158 237210 1 + 1053 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.67505.peg.190 CDS gi|171850984|emb|AM942444.1| 237386 239116 2 + 1731 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67505.peg.191 CDS gi|171850984|emb|AM942444.1| 239690 239202 -2 - 489 hypothetical protein - none -
fig|6666666.67505.peg.192 CDS gi|171850984|emb|AM942444.1| 241160 239868 -2 - 1293 Isocitrate lyase (EC 4.1.3.1) Glyoxylate bypass;
Glyoxylate bypass cluster;
Serine-glyoxylate cycle
fig|6666666.67505.peg.193 CDS gi|171850984|emb|AM942444.1| 241628 243832 2 + 2205 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67505.peg.194 CDS gi|171850984|emb|AM942444.1| 247833 247714 -3 - 120 hypothetical protein - none -
fig|6666666.67505.peg.195 CDS gi|171850984|emb|AM942444.1| 248611 250827 1 + 2217 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67505.peg.196 CDS gi|171850984|emb|AM942444.1| 251029 251862 1 + 834 Beta-phosphoglucomutase (EC 5.4.2.6) Trehalose Uptake and Utilization
fig|6666666.67505.peg.197 CDS gi|171850984|emb|AM942444.1| 251997 254597 3 + 2601 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Trehalose Biosynthesis;
Trehalose Uptake and Utilization
fig|6666666.67505.peg.198 CDS gi|171850984|emb|AM942444.1| 254834 255619 2 + 786 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67505.peg.199 CDS gi|171850984|emb|AM942444.1| 255650 257683 2 + 2034 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67505.peg.200 CDS gi|171850984|emb|AM942444.1| 257683 258432 1 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67505.peg.201 CDS gi|171850984|emb|AM942444.1| 258478 258792 1 + 315 FIG01282797: hypothetical protein - none -
fig|6666666.67505.peg.202 CDS gi|171850984|emb|AM942444.1| 259013 260338 2 + 1326 FIG00544632: hypothetical protein - none -
fig|6666666.67505.peg.203 CDS gi|171850984|emb|AM942444.1| 260400 260720 3 + 321 FIG00544701: hypothetical protein - none -
fig|6666666.67505.peg.204 CDS gi|171850984|emb|AM942444.1| 260753 261433 2 + 681 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67505.peg.205 CDS gi|171850984|emb|AM942444.1| 262439 261450 -2 - 990 FIG00544979: hypothetical protein - none -
fig|6666666.67505.peg.206 CDS gi|171850984|emb|AM942444.1| 263406 262567 -3 - 840 Uncharacterized protein SCO4203 - none -
fig|6666666.67505.peg.207 CDS gi|171850984|emb|AM942444.1| 263913 263413 -3 - 501 FIG00546961: hypothetical protein - none -
fig|6666666.67505.peg.208 CDS gi|171850984|emb|AM942444.1| 263937 265184 3 + 1248 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67505.peg.209 CDS gi|171850984|emb|AM942444.1| 267124 265343 -1 - 1782 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.210 CDS gi|171850984|emb|AM942444.1| 267298 268572 1 + 1275 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67505.peg.211 CDS gi|171850984|emb|AM942444.1| 268617 269216 3 + 600 Uncharacterized protein Rv0487/MT0505 clustered with mycothiol biosynthesis gene Glutathione analogs: mycothiol
fig|6666666.67505.peg.212 CDS gi|171850984|emb|AM942444.1| 269307 270059 3 + 753 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67505.peg.213 CDS gi|171850984|emb|AM942444.1| 271105 270194 -1 - 912 FIG00543972: hypothetical protein - none -
fig|6666666.67505.peg.214 CDS gi|171850984|emb|AM942444.1| 271318 272151 1 + 834 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67505.peg.215 CDS gi|171850984|emb|AM942444.1| 272261 273520 2 + 1260 FIG01276758: hypothetical protein - none -
fig|6666666.67505.peg.216 CDS gi|171850984|emb|AM942444.1| 273693 274529 3 + 837 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67505.peg.217 CDS gi|171850984|emb|AM942444.1| 274920 275126 3 + 207 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67505.peg.218 CDS gi|171850984|emb|AM942444.1| 276675 275707 -3 - 969 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67505.peg.219 CDS gi|171850984|emb|AM942444.1| 276700 276951 1 + 252 Glutaredoxin-like domain protein - none -
fig|6666666.67505.peg.220 CDS gi|171850984|emb|AM942444.1| 277255 278739 1 + 1485 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.221 CDS gi|171850984|emb|AM942444.1| 278729 279679 2 + 951 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.222 CDS gi|171850984|emb|AM942444.1| 279785 281554 2 + 1770 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.223 CDS gi|171850984|emb|AM942444.1| 281760 284405 3 + 2646 FIG00437212: hypothetical protein - none -
fig|6666666.67505.peg.224 CDS gi|171850984|emb|AM942444.1| 284411 284953 2 + 543 hypothetical protein - none -
fig|6666666.67505.peg.225 CDS gi|171850984|emb|AM942444.1| 285080 286105 2 + 1026 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.226 CDS gi|171850984|emb|AM942444.1| 286179 287102 3 + 924 FIG00543961: hypothetical protein - none -
fig|6666666.67505.peg.227 CDS gi|171850984|emb|AM942444.1| 287112 289919 3 + 2808 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67505.peg.228 CDS gi|171850984|emb|AM942444.1| 290112 289975 -3 - 138 hypothetical protein - none -
fig|6666666.67505.peg.229 CDS gi|171850984|emb|AM942444.1| 290099 291442 2 + 1344 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.230 CDS gi|171850984|emb|AM942444.1| 291477 292082 3 + 606 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67505.peg.231 CDS gi|171850984|emb|AM942444.1| 292129 292809 1 + 681 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67505.peg.232 CDS gi|171850984|emb|AM942444.1| 292810 293634 1 + 825 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67505.peg.233 CDS gi|171850984|emb|AM942444.1| 293680 295395 1 + 1716 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67505.peg.234 CDS gi|171850984|emb|AM942444.1| 295535 296650 2 + 1116 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67505.peg.235 CDS gi|171850984|emb|AM942444.1| 296746 297795 1 + 1050 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67505.peg.236 CDS gi|171850984|emb|AM942444.1| 299133 297844 -3 - 1290 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67505.peg.237 CDS gi|171850984|emb|AM942444.1| 299266 299970 1 + 705 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67505.peg.238 CDS gi|171850984|emb|AM942444.1| 299977 300855 1 + 879 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67505.peg.239 CDS gi|171850984|emb|AM942444.1| 300866 302044 2 + 1179 FIG00547831: hypothetical protein - none -
fig|6666666.67505.peg.240 CDS gi|171850984|emb|AM942444.1| 302368 302057 -1 - 312 FIG01267924: hypothetical protein - none -
fig|6666666.67505.peg.241 CDS gi|171850984|emb|AM942444.1| 302548 302916 1 + 369 FIG00545743: hypothetical protein - none -
fig|6666666.67505.peg.242 CDS gi|171850984|emb|AM942444.1| 303936 303055 -3 - 882 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67505.peg.243 CDS gi|171850984|emb|AM942444.1| 304181 304843 2 + 663 hypothetical protein - none -
fig|6666666.67505.peg.244 CDS gi|171850984|emb|AM942444.1| 304935 306932 3 + 1998 hypothetical protein - none -
fig|6666666.67505.peg.245 CDS gi|171850984|emb|AM942444.1| 308799 307063 -3 - 1737 putative ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.246 CDS gi|171850984|emb|AM942444.1| 309704 308796 -2 - 909 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67505.peg.247 CDS gi|171850984|emb|AM942444.1| 310685 309708 -2 - 978 putative transport protein - none -
fig|6666666.67505.peg.248 CDS gi|171850984|emb|AM942444.1| 312310 310682 -1 - 1629 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.67505.peg.249 CDS gi|171850984|emb|AM942444.1| 312472 314646 1 + 2175 FIG00544299: hypothetical protein - none -
fig|6666666.67505.peg.250 CDS gi|171850984|emb|AM942444.1| 315989 314643 -2 - 1347 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67505.peg.251 CDS gi|171850984|emb|AM942444.1| 316064 317005 2 + 942 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.252 CDS gi|171850984|emb|AM942444.1| 317981 317025 -2 - 957 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67505.peg.253 CDS gi|171850984|emb|AM942444.1| 318018 319199 3 + 1182 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67505.peg.254 CDS gi|171850984|emb|AM942444.1| 319406 321160 2 + 1755 hypothetical protein - none -
fig|6666666.67505.peg.255 CDS gi|171850984|emb|AM942444.1| 321541 321401 -1 - 141 hypothetical protein - none -
fig|6666666.67505.peg.256 CDS gi|171850984|emb|AM942444.1| 322272 321571 -3 - 702 FIG00547297: hypothetical protein - none -
fig|6666666.67505.peg.257 CDS gi|171850984|emb|AM942444.1| 322378 324381 1 + 2004 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67505.peg.258 CDS gi|171850984|emb|AM942444.1| 324374 324946 2 + 573 FIG00543979: hypothetical protein - none -
fig|6666666.67505.peg.259 CDS gi|171850984|emb|AM942444.1| 324919 326133 1 + 1215 Glycosyltransferase - none -
fig|6666666.67505.peg.260 CDS gi|171850984|emb|AM942444.1| 326215 326862 1 + 648 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67505.peg.261 CDS gi|171850984|emb|AM942444.1| 328440 327004 -3 - 1437 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67505.peg.262 CDS gi|171850984|emb|AM942444.1| 328652 329662 2 + 1011 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67505.peg.263 CDS gi|171850984|emb|AM942444.1| 330384 330734 3 + 351 hypothetical protein - none -
fig|6666666.67505.peg.264 CDS gi|171850984|emb|AM942444.1| 334563 330883 -3 - 3681 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.265 CDS gi|171850984|emb|AM942444.1| 335872 334718 -1 - 1155 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.266 CDS gi|171850984|emb|AM942444.1| 337419 335872 -3 - 1548 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.267 CDS gi|171850984|emb|AM942444.1| 337552 338085 1 + 534 intracellular protease, PfpI family - none -
fig|6666666.67505.peg.268 CDS gi|171850984|emb|AM942444.1| 338974 338198 -1 - 777 Putative stomatin/prohibitin-family membrane protease subunit PA4582 - none -
fig|6666666.67505.peg.269 CDS gi|171850984|emb|AM942444.1| 340155 340442 3 + 288 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67505.peg.270 CDS gi|171850984|emb|AM942444.1| 341760 340582 -3 - 1179 Mobile element protein - none -
fig|6666666.67505.peg.271 CDS gi|171850984|emb|AM942444.1| 342067 343506 1 + 1440 FIG00544414: hypothetical protein - none -
fig|6666666.67505.peg.272 CDS gi|171850984|emb|AM942444.1| 343507 345312 1 + 1806 ABC transporter TetB - none -
fig|6666666.67505.peg.273 CDS gi|171850984|emb|AM942444.1| 345334 345867 1 + 534 Phospholipid-binding protein - none -
fig|6666666.67505.peg.274 CDS gi|171850984|emb|AM942444.1| 345878 346234 2 + 357 FIG00543853: hypothetical protein - none -
fig|6666666.67505.peg.275 CDS gi|171850984|emb|AM942444.1| 347310 346231 -3 - 1080 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67505.peg.276 CDS gi|171850984|emb|AM942444.1| 348374 347322 -2 - 1053 FIG00545923: hypothetical protein - none -
fig|6666666.67505.peg.277 CDS gi|171850984|emb|AM942444.1| 348433 349290 1 + 858 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67505.peg.278 CDS gi|171850984|emb|AM942444.1| 349355 350521 2 + 1167 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67505.peg.279 CDS gi|171850984|emb|AM942444.1| 350545 350943 1 + 399 FIG00543988: hypothetical protein - none -
fig|6666666.67505.peg.280 CDS gi|171850984|emb|AM942444.1| 350966 351226 2 + 261 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67505.peg.281 CDS gi|171850984|emb|AM942444.1| 351223 352602 1 + 1380 Mobile element protein - none -
fig|6666666.67505.peg.282 CDS gi|171850984|emb|AM942444.1| 353845 352667 -1 - 1179 Mobile element protein - none -
fig|6666666.67505.peg.283 CDS gi|171850984|emb|AM942444.1| 354144 355028 3 + 885 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67505.peg.284 CDS gi|171850984|emb|AM942444.1| 355172 355615 2 + 444 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67505.peg.285 CDS gi|171850984|emb|AM942444.1| 355722 356438 3 + 717 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67505.peg.286 CDS gi|171850984|emb|AM942444.1| 356549 358147 2 + 1599 Mobile element protein - none -
fig|6666666.67505.peg.287 CDS gi|171850984|emb|AM942444.1| 359018 358269 -2 - 750 hypothetical membrane protein - none -
fig|6666666.67505.peg.288 CDS gi|171850984|emb|AM942444.1| 359069 359191 2 + 123 hypothetical protein - none -
fig|6666666.67505.peg.289 CDS gi|171850984|emb|AM942444.1| 359497 360504 1 + 1008 FIG00548024: hypothetical protein - none -
fig|6666666.67505.peg.290 CDS gi|171850984|emb|AM942444.1| 360555 363116 3 + 2562 periplasmic solute binding protein - none -
fig|6666666.67505.peg.291 CDS gi|171850984|emb|AM942444.1| 363113 363850 2 + 738 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67505.peg.292 CDS gi|171850984|emb|AM942444.1| 363850 366048 1 + 2199 ABC-3 protein - none -
fig|6666666.67505.peg.293 CDS gi|171850984|emb|AM942444.1| 366092 367378 2 + 1287 PE-PGRS FAMILY PROTEIN - none -
fig|6666666.67505.peg.294 CDS gi|171850984|emb|AM942444.1| 367776 368288 3 + 513 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67505.peg.295 CDS gi|171850984|emb|AM942444.1| 368425 368811 1 + 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67505.peg.296 CDS gi|171850984|emb|AM942444.1| 368939 369922 2 + 984 FIG00545886: hypothetical protein - none -
fig|6666666.67505.peg.297 CDS gi|171850984|emb|AM942444.1| 370266 373778 3 + 3513 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67505.peg.298 CDS gi|171850984|emb|AM942444.1| 373865 377836 2 + 3972 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67505.peg.299 CDS gi|171850984|emb|AM942444.1| 378698 377961 -2 - 738 hypothetical protein - none -
fig|6666666.67505.peg.300 CDS gi|171850984|emb|AM942444.1| 378840 379037 3 + 198 FIG00545348: hypothetical protein - none -
fig|6666666.67505.peg.301 CDS gi|171850984|emb|AM942444.1| 379768 379034 -1 - 735 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.67505.peg.302 CDS gi|171850984|emb|AM942444.1| 381653 379761 -2 - 1893 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.67505.peg.303 CDS gi|171850984|emb|AM942444.1| 382043 383908 2 + 1866 lipopolysaccharide modification acyltransferase - none -
fig|6666666.67505.peg.304 CDS gi|171850984|emb|AM942444.1| 384279 384650 3 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67505.peg.305 CDS gi|171850984|emb|AM942444.1| 384654 385124 3 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67505.peg.306 CDS gi|171850984|emb|AM942444.1| 385323 387431 3 + 2109 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67505.peg.307 CDS gi|171850984|emb|AM942444.1| 387862 389052 1 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67505.peg.308 CDS gi|171850984|emb|AM942444.1| 389780 389325 -2 - 456 hypothetical protein - none -
fig|6666666.67505.peg.309 CDS gi|171850984|emb|AM942444.1| 390927 390058 -3 - 870 FIG00545585: hypothetical protein - none -
fig|6666666.67505.peg.310 CDS gi|171850984|emb|AM942444.1| 391870 391082 -1 - 789 FIG00548303: hypothetical protein - none -
fig|6666666.67505.peg.311 CDS gi|171850984|emb|AM942444.1| 392289 391969 -3 - 321 hypothetical protein - none -
fig|6666666.67505.peg.312 CDS gi|171850984|emb|AM942444.1| 393295 393600 1 + 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.67505.peg.313 CDS gi|171850984|emb|AM942444.1| 393652 394308 1 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67505.peg.314 CDS gi|171850984|emb|AM942444.1| 394305 394982 3 + 678 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67505.peg.315 CDS gi|171850984|emb|AM942444.1| 394979 395287 2 + 309 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67505.peg.316 CDS gi|171850984|emb|AM942444.1| 395325 396161 3 + 837 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67505.peg.317 CDS gi|171850984|emb|AM942444.1| 396178 396456 1 + 279 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.67505.peg.318 CDS gi|171850984|emb|AM942444.1| 396459 396821 3 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67505.peg.319 CDS gi|171850984|emb|AM942444.1| 396821 397567 2 + 747 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.67505.peg.320 CDS gi|171850984|emb|AM942444.1| 397574 397990 2 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67505.peg.321 CDS gi|171850984|emb|AM942444.1| 397990 398223 1 + 234 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67505.peg.322 CDS gi|171850984|emb|AM942444.1| 398220 398498 3 + 279 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.67505.peg.323 CDS gi|171850984|emb|AM942444.1| 398747 398974 2 + 228 MbtH-like protein - none -
fig|6666666.67505.peg.324 CDS gi|171850984|emb|AM942444.1| 399068 400792 2 + 1725 FIG00545719: hypothetical protein - none -
fig|6666666.67505.peg.325 CDS gi|171850984|emb|AM942444.1| 400764 402512 3 + 1749 FIG00545016: hypothetical protein - none -
fig|6666666.67505.peg.326 CDS gi|171850984|emb|AM942444.1| 402592 404010 1 + 1419 L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis - none -
fig|6666666.67505.peg.327 CDS gi|171850984|emb|AM942444.1| 404111 414967 2 + 10857 peptide synthetase - none -
fig|6666666.67505.peg.328 CDS gi|171850984|emb|AM942444.1| 415974 414970 -3 - 1005 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67505.peg.329 CDS gi|171850984|emb|AM942444.1| 416034 416978 3 + 945 formyltransferase - none -
fig|6666666.67505.peg.330 CDS gi|171850984|emb|AM942444.1| 417044 418060 2 + 1017 iron-siderophore binding lipoprotein - none -
fig|6666666.67505.peg.331 CDS gi|171850984|emb|AM942444.1| 418535 418158 -2 - 378 Iron utilization protein - none -
fig|6666666.67505.peg.332 CDS gi|171850984|emb|AM942444.1| 418741 419379 1 + 639 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67505.peg.333 CDS gi|171850984|emb|AM942444.1| 420172 419390 -1 - 783 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67505.peg.334 CDS gi|171850984|emb|AM942444.1| 421206 420223 -3 - 984 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67505.peg.335 CDS gi|171850984|emb|AM942444.1| 422435 421317 -2 - 1119 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67505.peg.336 CDS gi|171850984|emb|AM942444.1| 422743 424092 1 + 1350 Mobile element protein - none -
fig|6666666.67505.peg.337 CDS gi|171850984|emb|AM942444.1| 424240 425475 1 + 1236 hypothetical protein - none -
fig|6666666.67505.peg.338 CDS gi|171850984|emb|AM942444.1| 425628 426881 3 + 1254 putative multidrug resistance protein - none -
fig|6666666.67505.peg.339 CDS gi|171850984|emb|AM942444.1| 428014 427085 -1 - 930 Siderophore-interacting protein - none -
fig|6666666.67505.peg.340 CDS gi|171850984|emb|AM942444.1| 428619 428203 -3 - 417 hypothetical protein - none -
fig|6666666.67505.peg.341 CDS gi|171850984|emb|AM942444.1| 429107 429478 2 + 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67505.peg.342 CDS gi|171850984|emb|AM942444.1| 429479 429790 2 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67505.peg.343 CDS gi|171850984|emb|AM942444.1| 429793 430374 1 + 582 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67505.peg.344 CDS gi|171850984|emb|AM942444.1| 430578 431066 3 + 489 FIG00546173: hypothetical protein - none -
fig|6666666.67505.peg.345 CDS gi|171850984|emb|AM942444.1| 431230 433293 1 + 2064 Putative phosphatase - none -
fig|6666666.67505.peg.346 CDS gi|171850984|emb|AM942444.1| 433706 433581 -2 - 126 hypothetical protein - none -
fig|6666666.67505.peg.347 CDS gi|171850984|emb|AM942444.1| 433761 434168 3 + 408 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.67505.peg.348 CDS gi|171850984|emb|AM942444.1| 434187 434723 3 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67505.peg.349 CDS gi|171850984|emb|AM942444.1| 434723 435133 2 + 411 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67505.peg.350 CDS gi|171850984|emb|AM942444.1| 435174 435815 3 + 642 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.67505.peg.351 CDS gi|171850984|emb|AM942444.1| 435819 436004 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67505.peg.352 CDS gi|171850984|emb|AM942444.1| 436007 436453 2 + 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67505.peg.353 CDS gi|171850984|emb|AM942444.1| 436793 436620 -2 - 174 hypothetical protein - none -
fig|6666666.67505.peg.354 CDS gi|171850984|emb|AM942444.1| 436824 438158 3 + 1335 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67505.peg.355 CDS gi|171850984|emb|AM942444.1| 438155 438700 2 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67505.peg.356 CDS gi|171850984|emb|AM942444.1| 438863 439657 2 + 795 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67505.peg.357 CDS gi|171850984|emb|AM942444.1| 439911 440129 3 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67505.peg.358 CDS gi|171850984|emb|AM942444.1| 440368 440736 1 + 369 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.67505.peg.359 CDS gi|171850984|emb|AM942444.1| 440736 441143 3 + 408 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.67505.peg.360 CDS gi|171850984|emb|AM942444.1| 441169 441774 1 + 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.67505.peg.361 CDS gi|171850984|emb|AM942444.1| 441888 442901 3 + 1014 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67505.peg.362 CDS gi|171850984|emb|AM942444.1| 442948 443418 1 + 471 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67505.peg.363 CDS gi|171850984|emb|AM942444.1| 443678 444652 2 + 975 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67505.peg.364 CDS gi|171850984|emb|AM942444.1| 445866 444814 -3 - 1053 hypothetical protein - none -
fig|6666666.67505.peg.365 CDS gi|171850984|emb|AM942444.1| 446057 447382 2 + 1326 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67505.peg.366 CDS gi|171850984|emb|AM942444.1| 449756 448578 -2 - 1179 FIG01264289: hypothetical protein - none -
fig|6666666.67505.peg.367 CDS gi|171850984|emb|AM942444.1| 450039 453524 3 + 3486 FtsK/SpoIIIE family protein - none -
fig|6666666.67505.peg.368 CDS gi|171850984|emb|AM942444.1| 453524 454960 2 + 1437 FIG00545362: hypothetical protein - none -
fig|6666666.67505.peg.369 CDS gi|171850984|emb|AM942444.1| 455267 455770 2 + 504 hypothetical protein - none -
fig|6666666.67505.peg.370 CDS gi|171850984|emb|AM942444.1| 455849 456451 2 + 603 putative secreted protein - none -
fig|6666666.67505.peg.371 CDS gi|171850984|emb|AM942444.1| 457220 456576 -2 - 645 hypothetical protein - none -
fig|6666666.67505.peg.372 CDS gi|171850984|emb|AM942444.1| 457905 458162 3 + 258 FIG00543840: hypothetical protein - none -
fig|6666666.67505.peg.373 CDS gi|171850984|emb|AM942444.1| 458238 458519 3 + 282 FIG00544893: hypothetical protein - none -
fig|6666666.67505.peg.374 CDS gi|171850984|emb|AM942444.1| 458987 459430 2 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67505.peg.375 CDS gi|171850984|emb|AM942444.1| 459430 459975 1 + 546 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.67505.peg.376 CDS gi|171850984|emb|AM942444.1| 460351 461988 1 + 1638 Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
5-FCL-like protein;
Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.67505.peg.377 CDS gi|171850984|emb|AM942444.1| 462155 463495 2 + 1341 Phosphoglucosamine mutase (EC 5.4.2.10) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67505.peg.378 CDS gi|171850984|emb|AM942444.1| 463684 464022 1 + 339 hypothetical protein - none -
fig|6666666.67505.peg.379 CDS gi|171850984|emb|AM942444.1| 464019 465125 3 + 1107 hypothetical protein - none -
fig|6666666.67505.peg.380 CDS gi|171850984|emb|AM942444.1| 465119 465463 2 + 345 hypothetical protein - none -
fig|6666666.67505.peg.381 CDS gi|171850984|emb|AM942444.1| 466174 465494 -1 - 681 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67505.peg.382 CDS gi|171850984|emb|AM942444.1| 467117 466314 -2 - 804 putative transcription regulator - none -
fig|6666666.67505.peg.383 CDS gi|171850984|emb|AM942444.1| 467421 467618 3 + 198 hypothetical protein - none -
fig|6666666.67505.peg.384 CDS gi|171850984|emb|AM942444.1| 467615 468439 2 + 825 hypothetical protein - none -
fig|6666666.67505.peg.385 CDS gi|171850984|emb|AM942444.1| 470031 469147 -3 - 885 FIG00548108: hypothetical protein - none -
fig|6666666.67505.peg.386 CDS gi|171850984|emb|AM942444.1| 470175 471968 3 + 1794 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67505.peg.387 CDS gi|171850984|emb|AM942444.1| 472081 473010 1 + 930 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67505.peg.388 CDS gi|171850984|emb|AM942444.1| 473021 474283 2 + 1263 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67505.peg.389 CDS gi|171850984|emb|AM942444.1| 474297 474899 3 + 603 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67505.peg.390 CDS gi|171850984|emb|AM942444.1| 475110 477746 3 + 2637 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.67505.peg.391 CDS gi|171850984|emb|AM942444.1| 478129 477965 -1 - 165 hypothetical protein - none -
fig|6666666.67505.peg.392 CDS gi|171850984|emb|AM942444.1| 478143 478442 3 + 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67505.peg.393 CDS gi|171850984|emb|AM942444.1| 478454 480064 2 + 1611 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67505.peg.394 CDS gi|171850984|emb|AM942444.1| 481634 481251 -2 - 384 FIG00544572: hypothetical protein - none -
fig|6666666.67505.peg.395 CDS gi|171850984|emb|AM942444.1| 481881 483440 3 + 1560 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67505.peg.396 CDS gi|171850984|emb|AM942444.1| 483585 484763 3 + 1179 Inosine-5@1-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67505.peg.397 CDS gi|171850984|emb|AM942444.1| 485005 484889 -1 - 117 hypothetical protein - none -
fig|6666666.67505.peg.398 CDS gi|171850984|emb|AM942444.1| 484991 486022 2 + 1032 periplasmic binding protein - none -
fig|6666666.67505.peg.399 CDS gi|171850984|emb|AM942444.1| 486025 487131 1 + 1107 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67505.peg.400 CDS gi|171850984|emb|AM942444.1| 487128 487952 3 + 825 putative ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.401 CDS gi|171850984|emb|AM942444.1| 488025 489596 3 + 1572 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) GMP synthase;
GMP synthase;
Purine conversions;
Purine conversions;
Purine salvage cluster;
Purine salvage cluster
fig|6666666.67505.peg.402 CDS gi|171850984|emb|AM942444.1| 490131 489784 -3 - 348 hypothetical membrane protein - none -
fig|6666666.67505.peg.403 CDS gi|171850984|emb|AM942444.1| 490630 491496 1 + 867 FIG00544716: hypothetical protein - none -
fig|6666666.67505.peg.404 CDS gi|171850984|emb|AM942444.1| 491517 493163 3 + 1647 DNA polymerase IV-like protein ImuB DNA repair, bacterial;
DNA replication strays
fig|6666666.67505.peg.405 CDS gi|171850984|emb|AM942444.1| 493428 494114 3 + 687 putative secreted protein - none -
fig|6666666.67505.peg.406 CDS gi|171850984|emb|AM942444.1| 494237 495400 2 + 1164 FIG00546271: hypothetical protein - none -
fig|6666666.67505.peg.407 CDS gi|171850984|emb|AM942444.1| 495393 496289 3 + 897 branched-chain amino acid transport protein - none -
fig|6666666.67505.peg.408 CDS gi|171850984|emb|AM942444.1| 496286 496705 2 + 420 hypothetical membrane protein - none -
fig|6666666.67505.peg.409 CDS gi|171850984|emb|AM942444.1| 497699 496941 -2 - 759 Methionine ABC transporter permease protein Methionine Biosynthesis
fig|6666666.67505.peg.410 CDS gi|171850984|emb|AM942444.1| 498787 497696 -1 - 1092 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.67505.peg.411 CDS gi|171850984|emb|AM942444.1| 499741 498872 -1 - 870 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.67505.peg.412 CDS gi|171850984|emb|AM942444.1| 500199 503471 3 + 3273 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) DNA replication strays
fig|6666666.67505.peg.413 CDS gi|171850984|emb|AM942444.1| 503709 504995 3 + 1287 FIG00545135: hypothetical protein - none -
fig|6666666.67505.peg.414 CDS gi|171850984|emb|AM942444.1| 505227 505793 3 + 567 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67505.peg.415 CDS gi|171850984|emb|AM942444.1| 505817 507481 2 + 1665 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67505.peg.416 CDS gi|171850984|emb|AM942444.1| 507478 508263 1 + 786 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67505.peg.417 CDS gi|171850984|emb|AM942444.1| 508460 509032 2 + 573 FIG00546937: hypothetical protein - none -
fig|6666666.67505.peg.418 CDS gi|171850984|emb|AM942444.1| 510467 509061 -2 - 1407 putative membrane protein - none -
fig|6666666.67505.peg.419 CDS gi|171850984|emb|AM942444.1| 510522 511109 3 + 588 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) ## TrmL RNA methylation
fig|6666666.67505.peg.420 CDS gi|171850984|emb|AM942444.1| 511195 512058 1 + 864 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67505.peg.421 CDS gi|171850984|emb|AM942444.1| 512089 512460 1 + 372 FIG00547414: hypothetical protein - none -
fig|6666666.67505.peg.422 CDS gi|171850984|emb|AM942444.1| 513707 512541 -2 - 1167 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67505.peg.423 CDS gi|171850984|emb|AM942444.1| 515045 513723 -2 - 1323 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67505.peg.424 CDS gi|171850984|emb|AM942444.1| 515556 516236 3 + 681 Uncharacterized protein conserved in bacteria - none -
fig|6666666.67505.peg.425 CDS gi|171850984|emb|AM942444.1| 518573 516336 -2 - 2238 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.67505.peg.426 CDS gi|171850984|emb|AM942444.1| 518797 520014 1 + 1218 putative transport protein - none -
fig|6666666.67505.peg.427 CDS gi|171850984|emb|AM942444.1| 520063 521103 1 + 1041 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67505.peg.428 CDS gi|171850984|emb|AM942444.1| 521121 522002 3 + 882 FIG00545435: hypothetical protein - none -
fig|6666666.67505.peg.429 CDS gi|171850984|emb|AM942444.1| 522014 523066 2 + 1053 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67505.peg.430 CDS gi|171850984|emb|AM942444.1| 523202 524299 2 + 1098 putative membrane protein - none -
fig|6666666.67505.peg.431 CDS gi|171850984|emb|AM942444.1| 524392 525762 1 + 1371 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.67505.peg.432 CDS gi|171850984|emb|AM942444.1| 525918 526949 3 + 1032 Inositol transport system sugar-binding protein - none -
fig|6666666.67505.peg.433 CDS gi|171850984|emb|AM942444.1| 526950 528098 3 + 1149 Inositol transport system permease protein - none -
fig|6666666.67505.peg.434 CDS gi|171850984|emb|AM942444.1| 528095 528997 2 + 903 Inositol transport system ATP-binding protein - none -
fig|6666666.67505.peg.435 CDS gi|171850984|emb|AM942444.1| 530406 529126 -3 - 1281 FIG00549131: hypothetical protein - none -
fig|6666666.67505.peg.436 CDS gi|171850984|emb|AM942444.1| 530594 530418 -2 - 177 hypothetical protein - none -
fig|6666666.67505.peg.437 CDS gi|171850984|emb|AM942444.1| 531753 530692 -3 - 1062 FIG00546306: hypothetical protein - none -
fig|6666666.67505.peg.438 CDS gi|171850984|emb|AM942444.1| 532037 531789 -2 - 249 hypothetical protein - none -
fig|6666666.67505.peg.439 CDS gi|171850984|emb|AM942444.1| 531998 532279 2 + 282 hypothetical protein - none -
fig|6666666.67505.peg.440 CDS gi|171850984|emb|AM942444.1| 532738 532232 -1 - 507 hypothetical protein - none -
fig|6666666.67505.peg.441 CDS gi|171850984|emb|AM942444.1| 534490 532883 -1 - 1608 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67505.peg.442 CDS gi|171850984|emb|AM942444.1| 535335 534487 -3 - 849 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.67505.peg.443 CDS gi|171850984|emb|AM942444.1| 535479 536690 3 + 1212 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67505.peg.444 CDS gi|171850984|emb|AM942444.1| 537214 536735 -1 - 480 FIG00546700: hypothetical protein - none -
fig|6666666.67505.peg.445 CDS gi|171850984|emb|AM942444.1| 538939 537326 -1 - 1614 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.446 CDS gi|171850984|emb|AM942444.1| 539536 538958 -1 - 579 FIG00547459: hypothetical protein - none -
fig|6666666.67505.peg.447 CDS gi|171850984|emb|AM942444.1| 539573 539692 2 + 120 hypothetical protein - none -
fig|6666666.67505.peg.448 CDS gi|171850984|emb|AM942444.1| 541688 539853 -2 - 1836 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67505.peg.449 CDS gi|171850984|emb|AM942444.1| 541929 543452 3 + 1524 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle
fig|6666666.67505.peg.450 CDS gi|171850984|emb|AM942444.1| 543593 544780 2 + 1188 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle
fig|6666666.67505.peg.451 CDS gi|171850984|emb|AM942444.1| 545550 544900 -3 - 651 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67505.peg.452 CDS gi|171850984|emb|AM942444.1| 545810 545613 -2 - 198 FIG00546164: hypothetical protein - none -
fig|6666666.67505.peg.453 CDS gi|171850984|emb|AM942444.1| 547490 545994 -2 - 1497 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.67505.peg.454 CDS gi|171850984|emb|AM942444.1| 547563 548474 3 + 912 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.67505.peg.455 CDS gi|171850984|emb|AM942444.1| 548474 549016 2 + 543 FIG00545249: hypothetical protein - none -
fig|6666666.67505.peg.456 CDS gi|171850984|emb|AM942444.1| 549013 550347 1 + 1335 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67505.peg.457 CDS gi|171850984|emb|AM942444.1| 550378 550905 1 + 528 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67505.peg.458 CDS gi|171850984|emb|AM942444.1| 551013 552029 3 + 1017 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.67505.peg.459 CDS gi|171850984|emb|AM942444.1| 552160 552026 -1 - 135 hypothetical protein - none -
fig|6666666.67505.peg.460 CDS gi|171850984|emb|AM942444.1| 552820 552530 -1 - 291 hypothetical protein - none -
fig|6666666.67505.peg.461 CDS gi|171850984|emb|AM942444.1| 553664 552834 -2 - 831 ABC sugar transporter, permease component - none -
fig|6666666.67505.peg.462 CDS gi|171850984|emb|AM942444.1| 554863 553661 -1 - 1203 Maltose/maltodextrin ABC transporter, permease protein MalF - none -
fig|6666666.67505.peg.463 CDS gi|171850984|emb|AM942444.1| 556284 555031 -3 - 1254 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis
fig|6666666.67505.peg.464 CDS gi|171850984|emb|AM942444.1| 557547 556471 -3 - 1077 Various polyols ABC transporter, ATP-binding component Uptake of selenate and selenite
fig|6666666.67505.peg.465 CDS gi|171850984|emb|AM942444.1| 557609 558862 2 + 1254 Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.466 CDS gi|171850984|emb|AM942444.1| 558920 559753 2 + 834 Hemoglobin, heme-dependent two component system response regulator ChrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.467 CDS gi|171850984|emb|AM942444.1| 559935 560921 3 + 987 putative ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.468 CDS gi|171850984|emb|AM942444.1| 560999 561757 2 + 759 Putative ABc transport system integral membrane protein - none -
fig|6666666.67505.peg.469 CDS gi|171850984|emb|AM942444.1| 562639 561848 -1 - 792 FIG00545912: hypothetical protein - none -
fig|6666666.67505.peg.470 CDS gi|171850984|emb|AM942444.1| 564418 562805 -1 - 1614 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67505.peg.471 CDS gi|171850984|emb|AM942444.1| 564417 564548 3 + 132 hypothetical protein - none -
fig|6666666.67505.peg.472 CDS gi|171850984|emb|AM942444.1| 564702 564586 -3 - 117 hypothetical protein - none -
fig|6666666.67505.peg.473 CDS gi|171850984|emb|AM942444.1| 564776 565882 2 + 1107 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67505.peg.474 CDS gi|171850984|emb|AM942444.1| 565893 566849 3 + 957 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67505.peg.475 CDS gi|171850984|emb|AM942444.1| 567129 568241 3 + 1113 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67505.peg.476 CDS gi|171850984|emb|AM942444.1| 568746 569036 3 + 291 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67505.peg.477 CDS gi|171850984|emb|AM942444.1| 569568 569161 -3 - 408 FIG00544777: hypothetical protein - none -
fig|6666666.67505.peg.478 CDS gi|171850984|emb|AM942444.1| 569678 570187 2 + 510 FIG00543823: hypothetical protein - none -
fig|6666666.67505.peg.479 CDS gi|171850984|emb|AM942444.1| 570264 571652 3 + 1389 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67505.peg.480 CDS gi|171850984|emb|AM942444.1| 571782 573053 3 + 1272 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67505.peg.481 CDS gi|171850984|emb|AM942444.1| 573970 573152 -1 - 819 FIG00544185: hypothetical protein - none -
fig|6666666.67505.peg.482 CDS gi|171850984|emb|AM942444.1| 574218 575705 3 + 1488 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis
fig|6666666.67505.peg.483 CDS gi|171850984|emb|AM942444.1| 575769 576464 3 + 696 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.67505.peg.484 CDS gi|171850984|emb|AM942444.1| 576546 577226 3 + 681 DNA-binding response regulator mtrA - none -
fig|6666666.67505.peg.485 CDS gi|171850984|emb|AM942444.1| 577347 579332 3 + 1986 Putative two component system sensor kinase - none -
fig|6666666.67505.peg.486 CDS gi|171850984|emb|AM942444.1| 579329 581059 2 + 1731 LpqB - none -
fig|6666666.67505.peg.487 CDS gi|171850984|emb|AM942444.1| 581173 581883 1 + 711 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental
fig|6666666.67505.peg.488 CDS gi|171850984|emb|AM942444.1| 582020 582697 2 + 678 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67505.peg.489 CDS gi|171850984|emb|AM942444.1| 582893 585466 2 + 2574 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67505.peg.490 CDS gi|171850984|emb|AM942444.1| 586111 585467 -1 - 645 hypothetical protein - none -
fig|6666666.67505.peg.491 CDS gi|171850984|emb|AM942444.1| 586227 586637 3 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.67505.peg.492 CDS gi|171850984|emb|AM942444.1| 586639 587157 1 + 519 FIG00544397: hypothetical protein - none -
fig|6666666.67505.peg.493 CDS gi|171850984|emb|AM942444.1| 588264 587254 -3 - 1011 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.67505.peg.494 CDS gi|171850984|emb|AM942444.1| 589671 588268 -3 - 1404 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67505.peg.495 CDS gi|171850984|emb|AM942444.1| 589710 590414 3 + 705 FIG00543821: hypothetical protein - none -
fig|6666666.67505.peg.496 CDS gi|171850984|emb|AM942444.1| 595576 590690 -1 - 4887 hypothetical protein - none -
fig|6666666.67505.peg.497 CDS gi|171850984|emb|AM942444.1| 595947 596579 3 + 633 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.67505.peg.498 CDS gi|171850984|emb|AM942444.1| 596592 596876 3 + 285 FIG00544827: hypothetical protein - none -
fig|6666666.67505.peg.499 CDS gi|171850984|emb|AM942444.1| 597522 597262 -3 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67505.peg.500 CDS gi|171850984|emb|AM942444.1| 598169 598582 2 + 414 FIG00543921: hypothetical protein - none -
fig|6666666.67505.peg.501 CDS gi|171850984|emb|AM942444.1| 599856 598579 -3 - 1278 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67505.peg.502 CDS gi|171850984|emb|AM942444.1| 601277 599856 -2 - 1422 putative ATP-dependent RNA helicase - none -
fig|6666666.67505.peg.503 CDS gi|171850984|emb|AM942444.1| 601452 601685 3 + 234 FIG00543928: hypothetical protein - none -
fig|6666666.67505.peg.504 CDS gi|171850984|emb|AM942444.1| 601913 602722 2 + 810 FIG00544386: hypothetical protein - none -
fig|6666666.67505.peg.505 CDS gi|171850984|emb|AM942444.1| 602736 603812 3 + 1077 FIG00544868: hypothetical protein - none -
fig|6666666.67505.peg.506 CDS gi|171850984|emb|AM942444.1| 603897 607463 3 + 3567 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67505.peg.507 CDS gi|171850984|emb|AM942444.1| 607460 611119 2 + 3660 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67505.peg.508 CDS gi|171850984|emb|AM942444.1| 611270 612331 2 + 1062 Potassium channel protein Potassium homeostasis
fig|6666666.67505.peg.509 CDS gi|171850984|emb|AM942444.1| 612332 614482 2 + 2151 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67505.peg.510 CDS gi|171850984|emb|AM942444.1| 615377 614511 -2 - 867 FIG00544187: hypothetical protein - none -
fig|6666666.67505.peg.511 CDS gi|171850984|emb|AM942444.1| 615708 616304 3 + 597 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67505.peg.512 CDS gi|171850984|emb|AM942444.1| 618147 616381 -3 - 1767 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67505.peg.513 CDS gi|171850984|emb|AM942444.1| 618234 619310 3 + 1077 Lon-like protease with PDZ domain CBSS-269801.1.peg.1715
fig|6666666.67505.peg.514 CDS gi|171850984|emb|AM942444.1| 619882 619346 -1 - 537 FIG129854: hypothetical protein - none -
fig|6666666.67505.peg.515 CDS gi|171850984|emb|AM942444.1| 620105 623026 2 + 2922 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67505.peg.516 CDS gi|171850984|emb|AM942444.1| 624607 623429 -1 - 1179 Mobile element protein - none -
fig|6666666.67505.peg.517 CDS gi|171850984|emb|AM942444.1| 624789 626168 3 + 1380 Mobile element protein - none -
fig|6666666.67505.peg.518 CDS gi|171850984|emb|AM942444.1| 626891 626487 -2 - 405 putative transcriptional regulator (MerR family) - none -
fig|6666666.67505.peg.519 CDS gi|171850984|emb|AM942444.1| 627079 628620 1 + 1542 Sulfate permease Cysteine Biosynthesis
fig|6666666.67505.peg.520 CDS gi|171850984|emb|AM942444.1| 629266 628790 -1 - 477 FIG00546546: hypothetical protein - none -
fig|6666666.67505.peg.521 CDS gi|171850984|emb|AM942444.1| 630914 629304 -2 - 1611 FIG00544300: hypothetical protein - none -
fig|6666666.67505.peg.522 CDS gi|171850984|emb|AM942444.1| 631257 630895 -3 - 363 hypothetical protein - none -
fig|6666666.67505.peg.523 CDS gi|171850984|emb|AM942444.1| 631806 632657 3 + 852 hypothetical protein - none -
fig|6666666.67505.peg.524 CDS gi|171850984|emb|AM942444.1| 633449 633838 2 + 390 hypothetical protein - none -
fig|6666666.67505.peg.525 CDS gi|171850984|emb|AM942444.1| 633884 634306 2 + 423 FIG00543983: hypothetical protein - none -
fig|6666666.67505.peg.526 CDS gi|171850984|emb|AM942444.1| 635676 634411 -3 - 1266 hypothetical protein - none -
fig|6666666.67505.peg.527 CDS gi|171850984|emb|AM942444.1| 635623 635790 1 + 168 hypothetical protein - none -
fig|6666666.67505.peg.528 CDS gi|171850984|emb|AM942444.1| 637487 635787 -2 - 1701 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.67505.peg.529 CDS gi|171850984|emb|AM942444.1| 638360 637551 -2 - 810 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67505.peg.530 CDS gi|171850984|emb|AM942444.1| 638540 639385 2 + 846 putative secreted protein - none -
fig|6666666.67505.peg.531 CDS gi|171850984|emb|AM942444.1| 639891 639562 -3 - 330 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67505.peg.532 CDS gi|171850984|emb|AM942444.1| 640008 643040 3 + 3033 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67505.peg.533 CDS gi|171850984|emb|AM942444.1| 643898 643155 -2 - 744 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67505.peg.534 CDS gi|171850984|emb|AM942444.1| 644583 646076 3 + 1494 FIG00544804: hypothetical protein - none -
fig|6666666.67505.peg.535 CDS gi|171850984|emb|AM942444.1| 646076 646726 2 + 651 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.67505.peg.536 CDS gi|171850984|emb|AM942444.1| 646719 648332 3 + 1614 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67505.peg.537 CDS gi|171850984|emb|AM942444.1| 648488 649681 2 + 1194 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67505.peg.538 CDS gi|171850984|emb|AM942444.1| 650712 649738 -3 - 975 putative transport protein - none -
fig|6666666.67505.peg.539 CDS gi|171850984|emb|AM942444.1| 651620 650850 -2 - 771 FIG00544119: hypothetical protein - none -
fig|6666666.67505.peg.540 CDS gi|171850984|emb|AM942444.1| 651874 653367 1 + 1494 ATP-dependent Zn protease - none -
fig|6666666.67505.peg.541 CDS gi|171850984|emb|AM942444.1| 653775 653527 -3 - 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67505.peg.542 CDS gi|171850984|emb|AM942444.1| 654098 653793 -2 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67505.peg.543 CDS gi|171850984|emb|AM942444.1| 654266 654102 -2 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67505.peg.544 CDS gi|171850984|emb|AM942444.1| 654504 654268 -3 - 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67505.peg.545 CDS gi|171850984|emb|AM942444.1| 654864 655133 3 + 270 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67505.peg.546 CDS gi|171850984|emb|AM942444.1| 655156 655323 1 + 168 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67505.peg.547 CDS gi|171850984|emb|AM942444.1| 655520 656215 2 + 696 two-component system, response regulator - none -
fig|6666666.67505.peg.548 CDS gi|171850984|emb|AM942444.1| 656212 657801 1 + 1590 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.67505.peg.549 CDS gi|171850984|emb|AM942444.1| 657848 659317 2 + 1470 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67505.peg.550 CDS gi|171850984|emb|AM942444.1| 659422 660069 1 + 648 molybdopterin biosynthesis enzyme - none -
fig|6666666.67505.peg.551 CDS gi|171850984|emb|AM942444.1| 660782 660318 -2 - 465 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67505.peg.552 CDS gi|171850984|emb|AM942444.1| 661679 660822 -2 - 858 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67505.peg.553 CDS gi|171850984|emb|AM942444.1| 661782 662570 3 + 789 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67505.peg.554 CDS gi|171850984|emb|AM942444.1| 662575 663813 1 + 1239 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67505.peg.555 CDS gi|171850984|emb|AM942444.1| 664039 664614 1 + 576 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.556 CDS gi|171850984|emb|AM942444.1| 664796 666127 2 + 1332 FIG00544639: hypothetical protein - none -
fig|6666666.67505.peg.557 CDS gi|171850984|emb|AM942444.1| 666161 666583 2 + 423 FIG00544115: hypothetical protein - none -
fig|6666666.67505.peg.558 CDS gi|171850984|emb|AM942444.1| 666650 667465 2 + 816 hypothetical membrane protein - none -
fig|6666666.67505.peg.559 CDS gi|171850984|emb|AM942444.1| 669048 667474 -3 - 1575 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67505.peg.560 CDS gi|171850984|emb|AM942444.1| 669102 670034 3 + 933 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67505.peg.561 CDS gi|171850984|emb|AM942444.1| 670145 672160 2 + 2016 Glycine betaine transporter OpuD Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67505.peg.562 CDS gi|171850984|emb|AM942444.1| 672271 674106 1 + 1836 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67505.peg.563 CDS gi|171850984|emb|AM942444.1| 674128 674985 1 + 858 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67505.peg.564 CDS gi|171850984|emb|AM942444.1| 675249 676409 3 + 1161 Cell wall-binding protein - none -
fig|6666666.67505.peg.565 CDS gi|171850984|emb|AM942444.1| 676514 677473 2 + 960 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.566 CDS gi|171850984|emb|AM942444.1| 677470 678522 1 + 1053 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67505.peg.567 CDS gi|171850984|emb|AM942444.1| 678605 680449 2 + 1845 ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.568 CDS gi|171850984|emb|AM942444.1| 681313 680600 -1 - 714 hypothetical protein - none -
fig|6666666.67505.peg.569 CDS gi|171850984|emb|AM942444.1| 681584 681333 -2 - 252 hypothetical protein - none -
fig|6666666.67505.peg.570 CDS gi|171850984|emb|AM942444.1| 682221 681757 -3 - 465 hypothetical protein - none -
fig|6666666.67505.peg.571 CDS gi|171850984|emb|AM942444.1| 682663 682232 -1 - 432 hypothetical protein - none -
fig|6666666.67505.peg.572 CDS gi|171850984|emb|AM942444.1| 683113 683436 1 + 324 FIG00544339: hypothetical protein - none -
fig|6666666.67505.peg.573 CDS gi|171850984|emb|AM942444.1| 683521 684606 1 + 1086 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67505.peg.574 CDS gi|171850984|emb|AM942444.1| 685299 684613 -3 - 687 Transcriptional regulator, TetR family - none -
fig|6666666.67505.peg.575 CDS gi|171850984|emb|AM942444.1| 685632 686507 3 + 876 FIG00545275: hypothetical protein - none -
fig|6666666.67505.peg.576 CDS gi|171850984|emb|AM942444.1| 686557 687222 1 + 666 FIG00544483: hypothetical protein - none -
fig|6666666.67505.peg.577 CDS gi|171850984|emb|AM942444.1| 688978 687332 -1 - 1647 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67505.peg.578 CDS gi|171850984|emb|AM942444.1| 689069 690043 2 + 975 hypothetical protein - none -
fig|6666666.67505.peg.579 CDS gi|171850984|emb|AM942444.1| 690192 691679 3 + 1488 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67505.peg.580 CDS gi|171850984|emb|AM942444.1| 692414 691767 -2 - 648 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67505.peg.581 CDS gi|171850984|emb|AM942444.1| 693190 692552 -1 - 639 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67505.peg.582 CDS gi|171850984|emb|AM942444.1| 694471 693518 -1 - 954 hypothetical protein - none -
fig|6666666.67505.peg.583 CDS gi|171850984|emb|AM942444.1| 695629 694658 -1 - 972 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67505.peg.584 CDS gi|171850984|emb|AM942444.1| 697350 695794 -3 - 1557 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67505.peg.585 CDS gi|171850984|emb|AM942444.1| 697324 697473 1 + 150 hypothetical protein - none -
fig|6666666.67505.peg.586 CDS gi|171850984|emb|AM942444.1| 698705 697470 -2 - 1236 Putative membrane protein - none -
fig|6666666.67505.peg.587 CDS gi|171850984|emb|AM942444.1| 699134 702799 2 + 3666 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67505.peg.588 CDS gi|171850984|emb|AM942444.1| 702883 704385 1 + 1503 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67505.peg.589 CDS gi|171850984|emb|AM942444.1| 704396 705079 2 + 684 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67505.peg.590 CDS gi|171850984|emb|AM942444.1| 705165 705998 3 + 834 FIG00545464: hypothetical protein - none -
fig|6666666.67505.peg.591 CDS gi|171850984|emb|AM942444.1| 706612 706031 -1 - 582 hypothetical protein - none -
fig|6666666.67505.peg.592 CDS gi|171850984|emb|AM942444.1| 706864 708141 1 + 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.67505.peg.593 CDS gi|171850984|emb|AM942444.1| 708167 708871 2 + 705 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67505.peg.594 CDS gi|171850984|emb|AM942444.1| 708946 709545 1 + 600 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67505.peg.595 CDS gi|171850984|emb|AM942444.1| 709550 710551 2 + 1002 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67505.peg.596 CDS gi|171850984|emb|AM942444.1| 711645 710734 -3 - 912 hypothetical protein - none -
fig|6666666.67505.peg.597 CDS gi|171850984|emb|AM942444.1| 711733 712482 1 + 750 Short chain dehydrogenase - none -
fig|6666666.67505.peg.598 CDS gi|171850984|emb|AM942444.1| 714203 712605 -2 - 1599 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.599 CDS gi|171850984|emb|AM942444.1| 714496 715386 1 + 891 FIG00543890: hypothetical protein - none -
fig|6666666.67505.peg.600 CDS gi|171850984|emb|AM942444.1| 715601 717562 2 + 1962 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67505.peg.601 CDS gi|171850984|emb|AM942444.1| 718199 717675 -2 - 525 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67505.peg.602 CDS gi|171850984|emb|AM942444.1| 718903 718427 -1 - 477 FIG00544319: hypothetical protein - none -
fig|6666666.67505.peg.603 CDS gi|171850984|emb|AM942444.1| 719026 720003 1 + 978 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67505.peg.604 CDS gi|171850984|emb|AM942444.1| 720065 720547 2 + 483 FIG00545712: hypothetical protein - none -
fig|6666666.67505.peg.605 CDS gi|171850984|emb|AM942444.1| 720566 721381 2 + 816 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67505.peg.606 CDS gi|171850984|emb|AM942444.1| 722401 721454 -1 - 948 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67505.peg.607 CDS gi|171850984|emb|AM942444.1| 722606 722406 -2 - 201 hypothetical protein - none -
fig|6666666.67505.peg.608 CDS gi|171850984|emb|AM942444.1| 722577 723878 3 + 1302 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.67505.peg.609 CDS gi|171850984|emb|AM942444.1| 723881 724555 2 + 675 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67505.peg.610 CDS gi|171850984|emb|AM942444.1| 725846 724677 -2 - 1170 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67505.peg.611 CDS gi|171850984|emb|AM942444.1| 726668 726309 -2 - 360 FIG00546727: hypothetical protein - none -
fig|6666666.67505.peg.612 CDS gi|171850984|emb|AM942444.1| 726862 727674 1 + 813 putative LysR-family transcriptional regulator - none -
fig|6666666.67505.peg.613 CDS gi|171850984|emb|AM942444.1| 727690 728304 1 + 615 sortase or related acyltransferase - none -
fig|6666666.67505.peg.614 CDS gi|171850984|emb|AM942444.1| 729980 728421 -2 - 1560 permease of the major facilitator superfamily - none -
fig|6666666.67505.peg.615 CDS gi|171850984|emb|AM942444.1| 730780 730058 -1 - 723 putative transcriptional regulator (TetR family) - none -
fig|6666666.67505.peg.616 CDS gi|171850984|emb|AM942444.1| 732361 730958 -1 - 1404 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67505.peg.617 CDS gi|171850984|emb|AM942444.1| 733556 732528 -2 - 1029 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67505.peg.618 CDS gi|171850984|emb|AM942444.1| 733782 734441 3 + 660 FIG00545451: hypothetical protein - none -
fig|6666666.67505.peg.619 CDS gi|171850984|emb|AM942444.1| 734760 734446 -3 - 315 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67505.peg.620 CDS gi|171850984|emb|AM942444.1| 736081 734789 -1 - 1293 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67505.peg.621 CDS gi|171850984|emb|AM942444.1| 736225 737253 1 + 1029 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67505.peg.622 CDS gi|171850984|emb|AM942444.1| 738200 737436 -2 - 765 FIG00544176: hypothetical protein - none -
fig|6666666.67505.peg.623 CDS gi|171850984|emb|AM942444.1| 739927 738272 -1 - 1656 FIG00546199: hypothetical protein - none -
fig|6666666.67505.peg.624 CDS gi|171850984|emb|AM942444.1| 740193 740026 -3 - 168 FIG00547082: hypothetical protein - none -
fig|6666666.67505.peg.625 CDS gi|171850984|emb|AM942444.1| 741919 740195 -1 - 1725 Sodium-dependent transporter - none -
fig|6666666.67505.peg.626 CDS gi|171850984|emb|AM942444.1| 742104 743189 3 + 1086 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.67505.peg.627 CDS gi|171850984|emb|AM942444.1| 743602 744408 1 + 807 Abortive infection bacteriophage resistance protein - none -
fig|6666666.67505.peg.628 CDS gi|171850984|emb|AM942444.1| 745490 744807 -2 - 684 hypothetical protein - none -
fig|6666666.67505.peg.629 CDS gi|171850984|emb|AM942444.1| 747035 745650 -2 - 1386 hypothetical protein - none -
fig|6666666.67505.peg.630 CDS gi|171850984|emb|AM942444.1| 747390 747259 -3 - 132 hypothetical protein - none -
fig|6666666.67505.peg.631 CDS gi|171850984|emb|AM942444.1| 749067 747637 -3 - 1431 transposase IS4 family protein - none -
fig|6666666.67505.peg.632 CDS gi|171850984|emb|AM942444.1| 749646 750824 3 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.633 CDS gi|171850984|emb|AM942444.1| 750870 751730 3 + 861 Abortive infection bacteriophage resistance protein - none -
fig|6666666.67505.peg.634 CDS gi|171850984|emb|AM942444.1| 752689 752387 -1 - 303 FIG00548336: hypothetical protein - none -
fig|6666666.67505.peg.635 CDS gi|171850984|emb|AM942444.1| 754155 752734 -3 - 1422 Mercuric ion reductase (EC 1.16.1.1) Mercuric reductase;
Mercury resistance operon
fig|6666666.67505.peg.636 CDS gi|171850984|emb|AM942444.1| 754254 754643 3 + 390 Mercuric resistance operon regulatory protein Mercury resistance operon
fig|6666666.67505.peg.637 CDS gi|171850984|emb|AM942444.1| 754815 754687 -3 - 129 FIG00547613: hypothetical protein - none -
fig|6666666.67505.peg.638 CDS gi|171850984|emb|AM942444.1| 757067 755256 -2 - 1812 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67505.peg.639 CDS gi|171850984|emb|AM942444.1| 757504 757145 -1 - 360 putative transcriptional regulator (ArsR family) - none -
fig|6666666.67505.peg.640 CDS gi|171850984|emb|AM942444.1| 757739 757587 -2 - 153 alkanal monooxygenase - none -
fig|6666666.67505.peg.641 CDS gi|171850984|emb|AM942444.1| 758464 757922 -1 - 543 hypothetical protein - none -
fig|6666666.67505.peg.642 CDS gi|171850984|emb|AM942444.1| 758766 759206 3 + 441 FIG00544626: hypothetical protein - none -
fig|6666666.67505.peg.643 CDS gi|171850984|emb|AM942444.1| 759275 761065 2 + 1791 hypothetical protein - none -
fig|6666666.67505.peg.644 CDS gi|171850984|emb|AM942444.1| 762403 761120 -1 - 1284 hypothetical protein - none -
fig|6666666.67505.peg.645 CDS gi|171850984|emb|AM942444.1| 763479 762445 -3 - 1035 hypothetical protein - none -
fig|6666666.67505.peg.646 CDS gi|171850984|emb|AM942444.1| 764150 763476 -2 - 675 Two-component response regulator - none -
fig|6666666.67505.peg.647 CDS gi|171850984|emb|AM942444.1| 764227 765114 1 + 888 Putative membrane protein - none -
fig|6666666.67505.peg.648 CDS gi|171850984|emb|AM942444.1| 765095 765976 2 + 882 hypothetical protein - none -
fig|6666666.67505.peg.649 CDS gi|171850984|emb|AM942444.1| 766118 766522 2 + 405 hypothetical protein - none -
fig|6666666.67505.peg.650 CDS gi|171850984|emb|AM942444.1| 766668 767657 3 + 990 hypothetical protein - none -
fig|6666666.67505.peg.651 CDS gi|171850984|emb|AM942444.1| 769021 767654 -1 - 1368 hypothetical protein - none -
fig|6666666.67505.peg.652 CDS gi|171850984|emb|AM942444.1| 770800 769052 -1 - 1749 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.653 CDS gi|171850984|emb|AM942444.1| 772842 770989 -3 - 1854 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67505.peg.654 CDS gi|171850984|emb|AM942444.1| 773851 772976 -1 - 876 UPF0028 protein YchK Broadly distributed proteins not in subsystems
fig|6666666.67505.peg.655 CDS gi|171850984|emb|AM942444.1| 774785 773859 -2 - 927 Membrane protein, putative - none -
fig|6666666.67505.peg.656 CDS gi|171850984|emb|AM942444.1| 776769 774859 -3 - 1911 FIG00546417: hypothetical protein - none -
fig|6666666.67505.peg.657 CDS gi|171850984|emb|AM942444.1| 777484 776807 -1 - 678 hypothetical protein - none -
fig|6666666.67505.peg.658 CDS gi|171850984|emb|AM942444.1| 777709 778878 1 + 1170 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67505.peg.659 CDS gi|171850984|emb|AM942444.1| 779169 780305 3 + 1137 Sulfate permease Cysteine Biosynthesis
fig|6666666.67505.peg.660 CDS gi|171850984|emb|AM942444.1| 781091 780384 -2 - 708 FIG00544264: hypothetical protein - none -
fig|6666666.67505.peg.661 CDS gi|171850984|emb|AM942444.1| 781446 783356 3 + 1911 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.67505.peg.662 CDS gi|171850984|emb|AM942444.1| 783492 785312 3 + 1821 LpqW - none -
fig|6666666.67505.peg.663 CDS gi|171850984|emb|AM942444.1| 785305 786312 1 + 1008 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67505.peg.664 CDS gi|171850984|emb|AM942444.1| 786299 786805 2 + 507 hypothetical membrane protein - none -
fig|6666666.67505.peg.665 CDS gi|171850984|emb|AM942444.1| 786883 787200 1 + 318 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.67505.peg.666 CDS gi|171850984|emb|AM942444.1| 787298 788440 2 + 1143 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67505.peg.667 CDS gi|171850984|emb|AM942444.1| 789985 788561 -1 - 1425 Phenylalanine-specific permease - none -
fig|6666666.67505.peg.668 CDS gi|171850984|emb|AM942444.1| 790152 791030 3 + 879 FIG00543965: hypothetical protein - none -
fig|6666666.67505.peg.669 CDS gi|171850984|emb|AM942444.1| 791045 791389 2 + 345 FIG00545506: hypothetical protein - none -
fig|6666666.67505.peg.670 CDS gi|171850984|emb|AM942444.1| 791394 792881 3 + 1488 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67505.peg.671 CDS gi|171850984|emb|AM942444.1| 792925 793794 1 + 870 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67505.peg.672 CDS gi|171850984|emb|AM942444.1| 795584 793974 -2 - 1611 levanase/invertase - none -
fig|6666666.67505.peg.673 CDS gi|171850984|emb|AM942444.1| 795561 795674 3 + 114 hypothetical protein - none -
fig|6666666.67505.peg.674 CDS gi|171850984|emb|AM942444.1| 796381 795701 -1 - 681 FIG00945644: hypothetical protein - none -
fig|6666666.67505.peg.675 CDS gi|171850984|emb|AM942444.1| 796610 797185 2 + 576 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.67505.peg.676 CDS gi|171850984|emb|AM942444.1| 797196 797669 3 + 474 hypothetical protein - none -
fig|6666666.67505.peg.677 CDS gi|171850984|emb|AM942444.1| 797702 798268 2 + 567 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67505.peg.678 CDS gi|171850984|emb|AM942444.1| 799512 798388 -3 - 1125 Mrp protein homolog - none -
fig|6666666.67505.peg.679 CDS gi|171850984|emb|AM942444.1| 800230 799664 -1 - 567 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.67505.peg.680 CDS gi|171850984|emb|AM942444.1| 801497 800223 -2 - 1275 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67505.peg.681 CDS gi|171850984|emb|AM942444.1| 801684 802331 3 + 648 FIG00544048: hypothetical protein - none -
fig|6666666.67505.peg.682 CDS gi|171850984|emb|AM942444.1| 806173 802475 -1 - 3699 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67505.peg.683 CDS gi|171850984|emb|AM942444.1| 809888 806292 -2 - 3597 FIG00543822: hypothetical protein - none -
fig|6666666.67505.peg.684 CDS gi|171850984|emb|AM942444.1| 810045 810869 3 + 825 FIG00547257: hypothetical protein - none -
fig|6666666.67505.peg.685 CDS gi|171850984|emb|AM942444.1| 811031 812338 2 + 1308 hypothetical protein - none -
fig|6666666.67505.peg.686 CDS gi|171850984|emb|AM942444.1| 813792 812449 -3 - 1344 Mobile element protein - none -
fig|6666666.67505.peg.687 CDS gi|171850984|emb|AM942444.1| 815322 813889 -3 - 1434 putative amino acid permease - none -
fig|6666666.67505.peg.688 CDS gi|171850984|emb|AM942444.1| 815515 817851 1 + 2337 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67505.peg.689 CDS gi|171850984|emb|AM942444.1| 818515 818030 -1 - 486 FIG00544250: hypothetical protein - none -
fig|6666666.67505.peg.690 CDS gi|171850984|emb|AM942444.1| 819121 818564 -1 - 558 FIG00544279: hypothetical protein - none -
fig|6666666.67505.peg.691 CDS gi|171850984|emb|AM942444.1| 820877 819303 -2 - 1575 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67505.peg.692 CDS gi|171850984|emb|AM942444.1| 821139 824318 3 + 3180 Helicase, SNF2/RAD54 family - none -
fig|6666666.67505.peg.693 CDS gi|171850984|emb|AM942444.1| 824315 825247 2 + 933 FIG00545674: hypothetical protein - none -
fig|6666666.67505.peg.694 CDS gi|171850984|emb|AM942444.1| 825252 826529 3 + 1278 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67505.peg.695 CDS gi|171850984|emb|AM942444.1| 826530 829436 3 + 2907 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67505.peg.696 CDS gi|171850984|emb|AM942444.1| 829698 831362 3 + 1665 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67505.peg.697 CDS gi|171850984|emb|AM942444.1| 831375 832763 3 + 1389 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67505.peg.698 CDS gi|171850984|emb|AM942444.1| 832945 834285 1 + 1341 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67505.peg.699 CDS gi|171850984|emb|AM942444.1| 834291 835211 3 + 921 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67505.peg.700 CDS gi|171850984|emb|AM942444.1| 836279 835227 -2 - 1053 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67505.peg.701 CDS gi|171850984|emb|AM942444.1| 836455 837024 1 + 570 molybdenum cofactor biosynthesis protein - none -
fig|6666666.67505.peg.702 CDS gi|171850984|emb|AM942444.1| 837044 837307 2 + 264 hypothetical protein - none -
fig|6666666.67505.peg.703 CDS gi|171850984|emb|AM942444.1| 838054 837383 -1 - 672 FIG00546849: hypothetical protein - none -
fig|6666666.67505.peg.704 CDS gi|171850984|emb|AM942444.1| 839317 838067 -1 - 1251 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67505.peg.705 CDS gi|171850984|emb|AM942444.1| 840401 839358 -2 - 1044 Molybdenum cofactor biosynthesis protein MoaA ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67505.peg.706 CDS gi|171850984|emb|AM942444.1| 842215 840446 -1 - 1770 acyl-CoA synthetase - none -
fig|6666666.67505.peg.707 CDS gi|171850984|emb|AM942444.1| 842174 842299 2 + 126 hypothetical protein - none -
fig|6666666.67505.peg.708 CDS gi|171850984|emb|AM942444.1| 842755 844476 1 + 1722 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67505.peg.709 CDS gi|171850984|emb|AM942444.1| 844539 845654 3 + 1116 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67505.peg.710 CDS gi|171850984|emb|AM942444.1| 845655 846653 3 + 999 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67505.peg.711 CDS gi|171850984|emb|AM942444.1| 846755 847414 2 + 660 Sua5 YciO YrdC YwlC family protein - none -
fig|6666666.67505.peg.712 CDS gi|171850984|emb|AM942444.1| 847430 848611 2 + 1182 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67505.peg.713 CDS gi|171850984|emb|AM942444.1| 848604 849116 3 + 513 ATP synthase protein I - none -
fig|6666666.67505.peg.714 CDS gi|171850984|emb|AM942444.1| 849492 850265 3 + 774 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.715 CDS gi|171850984|emb|AM942444.1| 850366 850608 1 + 243 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.716 CDS gi|171850984|emb|AM942444.1| 850756 851316 1 + 561 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.717 CDS gi|171850984|emb|AM942444.1| 851322 852140 3 + 819 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.718 CDS gi|171850984|emb|AM942444.1| 852198 853835 3 + 1638 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.719 CDS gi|171850984|emb|AM942444.1| 853900 854877 1 + 978 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.720 CDS gi|171850984|emb|AM942444.1| 854880 856328 3 + 1449 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.721 CDS gi|171850984|emb|AM942444.1| 856340 856714 2 + 375 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67505.peg.722 CDS gi|171850984|emb|AM942444.1| 856966 857397 1 + 432 FIG00544079: hypothetical protein - none -
fig|6666666.67505.peg.723 CDS gi|171850984|emb|AM942444.1| 857444 857632 2 + 189 hypothetical protein - none -
fig|6666666.67505.peg.724 CDS gi|171850984|emb|AM942444.1| 857688 858428 3 + 741 FIG00996186: hypothetical protein - none -
fig|6666666.67505.peg.725 CDS gi|171850984|emb|AM942444.1| 858509 859555 2 + 1047 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67505.peg.726 CDS gi|171850984|emb|AM942444.1| 859622 860482 2 + 861 ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.727 CDS gi|171850984|emb|AM942444.1| 860647 861447 1 + 801 FIG00996530: hypothetical protein - none -
fig|6666666.67505.peg.728 CDS gi|171850984|emb|AM942444.1| 861455 862726 2 + 1272 SAM-dependent methyltransferase - none -
fig|6666666.67505.peg.729 CDS gi|171850984|emb|AM942444.1| 862917 863705 3 + 789 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67505.peg.730 CDS gi|171850984|emb|AM942444.1| 863768 864718 2 + 951 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67505.peg.731 CDS gi|171850984|emb|AM942444.1| 864925 866304 1 + 1380 Magnesium citrate secondary transporter - none -
fig|6666666.67505.peg.732 CDS gi|171850984|emb|AM942444.1| 866335 867522 1 + 1188 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.733 CDS gi|171850984|emb|AM942444.1| 867552 868772 3 + 1221 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67505.peg.734 CDS gi|171850984|emb|AM942444.1| 868769 869827 2 + 1059 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67505.peg.735 CDS gi|171850984|emb|AM942444.1| 872037 869899 -3 - 2139 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67505.peg.736 CDS gi|171850984|emb|AM942444.1| 872100 872771 3 + 672 FIG00544413: hypothetical protein - none -
fig|6666666.67505.peg.737 CDS gi|171850984|emb|AM942444.1| 872796 874331 3 + 1536 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67505.peg.738 CDS gi|171850984|emb|AM942444.1| 875129 874458 -2 - 672 FIG00544014: hypothetical protein - none -
fig|6666666.67505.peg.739 CDS gi|171850984|emb|AM942444.1| 875233 875544 1 + 312 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67505.peg.740 CDS gi|171850984|emb|AM942444.1| 875645 877153 2 + 1509 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67505.peg.741 CDS gi|171850984|emb|AM942444.1| 877238 877915 2 + 678 putative protein with NUDIX domain - none -
fig|6666666.67505.peg.742 CDS gi|171850984|emb|AM942444.1| 878013 879458 3 + 1446 permease of the major facilitator superfamily - none -
fig|6666666.67505.peg.743 CDS gi|171850984|emb|AM942444.1| 879529 880566 1 + 1038 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67505.peg.744 CDS gi|171850984|emb|AM942444.1| 880612 882135 1 + 1524 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67505.peg.745 CDS gi|171850984|emb|AM942444.1| 882265 883905 1 + 1641 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.746 CDS gi|171850984|emb|AM942444.1| 884423 885046 2 + 624 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67505.peg.747 CDS gi|171850984|emb|AM942444.1| 885043 885747 1 + 705 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.67505.peg.748 CDS gi|171850984|emb|AM942444.1| 886899 885910 -3 - 990 Mobile element protein - none -
fig|6666666.67505.peg.749 CDS gi|171850984|emb|AM942444.1| 888074 886899 -2 - 1176 Chloramphenicol resistance protein - none -
fig|6666666.67505.peg.750 CDS gi|171850984|emb|AM942444.1| 888567 889268 3 + 702 periplasmic binding protein - none -
fig|6666666.67505.peg.751 CDS gi|171850984|emb|AM942444.1| 890327 889281 -2 - 1047 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67505.peg.752 CDS gi|171850984|emb|AM942444.1| 890563 892086 1 + 1524 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67505.peg.753 CDS gi|171850984|emb|AM942444.1| 894779 892188 -2 - 2592 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67505.peg.754 CDS gi|171850984|emb|AM942444.1| 896662 894785 -1 - 1878 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67505.peg.755 CDS gi|171850984|emb|AM942444.1| 897426 896761 -3 - 666 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67505.peg.756 CDS gi|171850984|emb|AM942444.1| 899191 897503 -1 - 1689 FIG00544780: hypothetical protein - none -
fig|6666666.67505.peg.757 CDS gi|171850984|emb|AM942444.1| 899545 901458 1 + 1914 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67505.peg.758 CDS gi|171850984|emb|AM942444.1| 901458 901961 3 + 504 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67505.peg.759 CDS gi|171850984|emb|AM942444.1| 902101 903114 1 + 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67505.peg.760 CDS gi|171850984|emb|AM942444.1| 903199 904215 1 + 1017 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67505.peg.761 CDS gi|171850984|emb|AM942444.1| 905610 904246 -3 - 1365 hypothetical protein - none -
fig|6666666.67505.peg.762 CDS gi|171850984|emb|AM942444.1| 906392 905730 -2 - 663 hypothetical protein - none -
fig|6666666.67505.peg.763 CDS gi|171850984|emb|AM942444.1| 907160 908752 2 + 1593 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67505.peg.764 CDS gi|171850984|emb|AM942444.1| 910035 908857 -3 - 1179 Mobile element protein - none -
fig|6666666.67505.peg.765 CDS gi|171850984|emb|AM942444.1| 910051 910179 1 + 129 hypothetical protein - none -
fig|6666666.67505.peg.766 CDS gi|171850984|emb|AM942444.1| 910600 910256 -1 - 345 Putative membrane protein - none -
fig|6666666.67505.peg.767 CDS gi|171850984|emb|AM942444.1| 912322 910754 -1 - 1569 putative integral membrane transport protein - none -
fig|6666666.67505.peg.768 CDS gi|171850984|emb|AM942444.1| 913257 912403 -3 - 855 putative ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.769 CDS gi|171850984|emb|AM942444.1| 913398 914417 3 + 1020 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67505.peg.770 CDS gi|171850984|emb|AM942444.1| 914557 916419 1 + 1863 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67505.peg.771 CDS gi|171850984|emb|AM942444.1| 916457 917176 2 + 720 DEDDh 3@1-5@1 exonuclease domain of the epsilon subunit of DNA polymerase III DNA replication strays
fig|6666666.67505.peg.772 CDS gi|171850984|emb|AM942444.1| 917233 917994 1 + 762 Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67505.peg.773 CDS gi|171850984|emb|AM942444.1| 919338 918151 -3 - 1188 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67505.peg.774 CDS gi|171850984|emb|AM942444.1| 919399 920475 1 + 1077 hypothetical protein - none -
fig|6666666.67505.peg.775 CDS gi|171850984|emb|AM942444.1| 920623 922122 1 + 1500 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67505.peg.776 CDS gi|171850984|emb|AM942444.1| 923736 922597 -3 - 1140 Inner membrane protein YihY, formerly thought to be RNase BN CBSS-342610.3.peg.283;
LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.67505.peg.777 CDS gi|171850984|emb|AM942444.1| 926139 924139 -3 - 2001 oligopeptide transporter - none -
fig|6666666.67505.peg.778 CDS gi|171850984|emb|AM942444.1| 926950 926201 -1 - 750 Transcriptional regulator, IclR family - none -
fig|6666666.67505.peg.779 CDS gi|171850984|emb|AM942444.1| 927093 928544 3 + 1452 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67505.peg.780 CDS gi|171850984|emb|AM942444.1| 928600 929205 1 + 606 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67505.peg.781 CDS gi|171850984|emb|AM942444.1| 930331 929321 -1 - 1011 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67505.peg.782 CDS gi|171850984|emb|AM942444.1| 930476 931456 2 + 981 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.783 CDS gi|171850984|emb|AM942444.1| 931523 932611 2 + 1089 D-alanine--D-alanine ligase A (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67505.peg.784 CDS gi|171850984|emb|AM942444.1| 933841 932714 -1 - 1128 Putative exported protein - none -
fig|6666666.67505.peg.785 CDS gi|171850984|emb|AM942444.1| 933871 934848 1 + 978 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67505.peg.786 CDS gi|171850984|emb|AM942444.1| 934880 935515 2 + 636 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67505.peg.787 CDS gi|171850984|emb|AM942444.1| 935526 937100 3 + 1575 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.788 CDS gi|171850984|emb|AM942444.1| 937101 939329 3 + 2229 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67505.peg.789 CDS gi|171850984|emb|AM942444.1| 939402 939965 3 + 564 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.67505.peg.790 CDS gi|171850984|emb|AM942444.1| 940067 940528 2 + 462 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.67505.peg.791 CDS gi|171850984|emb|AM942444.1| 940632 941366 3 + 735 Cell division initiation protein - none -
fig|6666666.67505.peg.792 CDS gi|171850984|emb|AM942444.1| 941451 942026 3 + 576 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67505.peg.793 CDS gi|171850984|emb|AM942444.1| 942010 942747 1 + 738 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67505.peg.794 CDS gi|171850984|emb|AM942444.1| 942740 943609 2 + 870 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67505.peg.795 CDS gi|171850984|emb|AM942444.1| 943658 945184 2 + 1527 amino acid carrier protein - none -
fig|6666666.67505.peg.796 CDS gi|171850984|emb|AM942444.1| 945236 945532 2 + 297 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.797 CDS gi|171850984|emb|AM942444.1| 945584 949072 2 + 3489 Chromosome partition protein smc - none -
fig|6666666.67505.peg.798 CDS gi|171850984|emb|AM942444.1| 949152 952706 3 + 3555 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.67505.peg.799 CDS gi|171850984|emb|AM942444.1| 952712 954376 2 + 1665 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67505.peg.800 CDS gi|171850984|emb|AM942444.1| 954587 955612 2 + 1026 Ammonium transporter Ammonia assimilation
fig|6666666.67505.peg.801 CDS gi|171850984|emb|AM942444.1| 955757 957352 2 + 1596 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67505.peg.802 CDS gi|171850984|emb|AM942444.1| 958842 957412 -3 - 1431 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67505.peg.803 CDS gi|171850984|emb|AM942444.1| 959036 960172 2 + 1137 FIG00545606: hypothetical protein - none -
fig|6666666.67505.peg.804 CDS gi|171850984|emb|AM942444.1| 960412 960921 1 + 510 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.67505.peg.805 CDS gi|171850984|emb|AM942444.1| 961271 962614 2 + 1344 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67505.peg.806 CDS gi|171850984|emb|AM942444.1| 962623 963207 1 + 585 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.67505.peg.807 CDS gi|171850984|emb|AM942444.1| 963204 963539 3 + 336 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.808 CDS gi|171850984|emb|AM942444.1| 963532 964098 1 + 567 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.809 CDS gi|171850984|emb|AM942444.1| 965964 964156 -3 - 1809 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67505.peg.810 CDS gi|171850984|emb|AM942444.1| 966495 968666 3 + 2172 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67505.peg.811 CDS gi|171850984|emb|AM942444.1| 968708 970279 2 + 1572 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67505.peg.812 CDS gi|171850984|emb|AM942444.1| 970394 972580 2 + 2187 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67505.peg.813 CDS gi|171850984|emb|AM942444.1| 972661 975024 1 + 2364 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67505.peg.814 CDS gi|171850984|emb|AM942444.1| 975154 975495 1 + 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67505.peg.815 CDS gi|171850984|emb|AM942444.1| 975635 976528 2 + 894 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67505.peg.816 CDS gi|171850984|emb|AM942444.1| 976531 977256 1 + 726 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H;
Ribonucleases in Bacillus
fig|6666666.67505.peg.817 CDS gi|171850984|emb|AM942444.1| 977253 977561 3 + 309 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67505.peg.818 CDS gi|171850984|emb|AM942444.1| 977993 978262 2 + 270 hypothetical protein - none -
fig|6666666.67505.peg.819 CDS gi|171850984|emb|AM942444.1| 978385 979878 1 + 1494 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67505.peg.820 CDS gi|171850984|emb|AM942444.1| 979875 981125 3 + 1251 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67505.peg.821 CDS gi|171850984|emb|AM942444.1| 981181 982176 1 + 996 Tyrosine recombinase XerC - none -
fig|6666666.67505.peg.822 CDS gi|171850984|emb|AM942444.1| 982822 982196 -1 - 627 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.67505.peg.823 CDS gi|171850984|emb|AM942444.1| 983353 984147 1 + 795 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.67505.peg.824 CDS gi|171850984|emb|AM942444.1| 984327 985145 3 + 819 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67505.peg.825 CDS gi|171850984|emb|AM942444.1| 985350 986045 3 + 696 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67505.peg.826 CDS gi|171850984|emb|AM942444.1| 986148 986702 3 + 555 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67505.peg.827 CDS gi|171850984|emb|AM942444.1| 986857 987759 1 + 903 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.828 CDS gi|171850984|emb|AM942444.1| 988209 987766 -3 - 444 FIG00544474: hypothetical protein - none -
fig|6666666.67505.peg.829 CDS gi|171850984|emb|AM942444.1| 988355 989455 2 + 1101 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67505.peg.830 CDS gi|171850984|emb|AM942444.1| 989620 992079 1 + 2460 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67505.peg.831 CDS gi|171850984|emb|AM942444.1| 992103 992744 3 + 642 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67505.peg.832 CDS gi|171850984|emb|AM942444.1| 992749 993720 1 + 972 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67505.peg.833 CDS gi|171850984|emb|AM942444.1| 993720 994325 3 + 606 Putative oxidoreductase component of anaerobic dehydrogenases; Chaperone protein TorD - none -
fig|6666666.67505.peg.834 CDS gi|171850984|emb|AM942444.1| 994306 995169 1 + 864 hypothetical protein - none -
fig|6666666.67505.peg.835 CDS gi|171850984|emb|AM942444.1| 995729 995343 -2 - 387 hypothetical membrane protein - none -
fig|6666666.67505.peg.836 CDS gi|171850984|emb|AM942444.1| 995865 997052 3 + 1188 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67505.peg.837 CDS gi|171850984|emb|AM942444.1| 997037 998440 2 + 1404 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.67505.peg.838 CDS gi|171850984|emb|AM942444.1| 998567 999727 2 + 1161 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67505.peg.839 CDS gi|171850984|emb|AM942444.1| 1000572 999799 -3 - 774 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.67505.peg.840 CDS gi|171850984|emb|AM942444.1| 1001696 1000689 -2 - 1008 ABC-type transporter, permease component - none -
fig|6666666.67505.peg.841 CDS gi|171850984|emb|AM942444.1| 1001812 1003155 1 + 1344 two-component system, sensor protein - none -
fig|6666666.67505.peg.842 CDS gi|171850984|emb|AM942444.1| 1003152 1003856 3 + 705 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.843 CDS gi|171850984|emb|AM942444.1| 1003938 1005887 3 + 1950 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.844 CDS gi|171850984|emb|AM942444.1| 1005927 1006793 3 + 867 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67505.peg.845 CDS gi|171850984|emb|AM942444.1| 1008354 1006927 -3 - 1428 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67505.peg.846 CDS gi|171850984|emb|AM942444.1| 1009553 1008411 -2 - 1143 hypothetical protein - none -
fig|6666666.67505.peg.847 CDS gi|171850984|emb|AM942444.1| 1009716 1009564 -3 - 153 hypothetical protein - none -
fig|6666666.67505.peg.848 CDS gi|171850984|emb|AM942444.1| 1009696 1011183 1 + 1488 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67505.peg.849 CDS gi|171850984|emb|AM942444.1| 1011290 1012333 2 + 1044 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.850 CDS gi|171850984|emb|AM942444.1| 1013286 1012372 -3 - 915 UPF0246 protein YaaA - none -
fig|6666666.67505.peg.851 CDS gi|171850984|emb|AM942444.1| 1013343 1015121 3 + 1779 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.67505.peg.852 CDS gi|171850984|emb|AM942444.1| 1016311 1015208 -1 - 1104 FIG00544866: hypothetical protein - none -
fig|6666666.67505.peg.853 CDS gi|171850984|emb|AM942444.1| 1016451 1017041 3 + 591 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67505.peg.854 CDS gi|171850984|emb|AM942444.1| 1017069 1018067 3 + 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67505.peg.855 CDS gi|171850984|emb|AM942444.1| 1018192 1018308 1 + 117 hypothetical protein - none -
fig|6666666.67505.peg.856 CDS gi|171850984|emb|AM942444.1| 1018493 1018672 2 + 180 COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67505.peg.857 CDS gi|171850984|emb|AM942444.1| 1018861 1021665 1 + 2805 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.67505.peg.858 CDS gi|171850984|emb|AM942444.1| 1021815 1022246 3 + 432 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67505.peg.859 CDS gi|171850984|emb|AM942444.1| 1022336 1023706 2 + 1371 putative DNA-damage-inducible protein F - none -
fig|6666666.67505.peg.860 CDS gi|171850984|emb|AM942444.1| 1023859 1024818 1 + 960 putative SimX4 homolog - none -
fig|6666666.67505.peg.861 CDS gi|171850984|emb|AM942444.1| 1024822 1025568 1 + 747 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.67505.peg.862 CDS gi|171850984|emb|AM942444.1| 1026575 1025565 -2 - 1011 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.67505.peg.863 CDS gi|171850984|emb|AM942444.1| 1026660 1027595 3 + 936 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67505.peg.864 CDS gi|171850984|emb|AM942444.1| 1027692 1027961 3 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.67505.peg.865 CDS gi|171850984|emb|AM942444.1| 1028171 1030444 2 + 2274 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.67505.peg.866 CDS gi|171850984|emb|AM942444.1| 1030584 1031330 3 + 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67505.peg.867 CDS gi|171850984|emb|AM942444.1| 1031353 1032117 1 + 765 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67505.peg.868 CDS gi|171850984|emb|AM942444.1| 1032225 1033127 3 + 903 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67505.peg.869 CDS gi|171850984|emb|AM942444.1| 1033137 1035359 3 + 2223 Ribonuclease J2 (endoribonuclease in RNA processing) Ribonucleases in Bacillus
fig|6666666.67505.peg.870 CDS gi|171850984|emb|AM942444.1| 1035955 1038870 1 + 2916 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67505.peg.871 CDS gi|171850984|emb|AM942444.1| 1039114 1040229 1 + 1116 Integral membrane protein TerC - none -
fig|6666666.67505.peg.872 CDS gi|171850984|emb|AM942444.1| 1040240 1040854 2 + 615 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.873 CDS gi|171850984|emb|AM942444.1| 1040876 1041412 2 + 537 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67505.peg.874 CDS gi|171850984|emb|AM942444.1| 1041435 1041875 3 + 441 putative transcription regulator - none -
fig|6666666.67505.peg.875 CDS gi|171850984|emb|AM942444.1| 1041983 1042849 2 + 867 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67505.peg.876 CDS gi|171850984|emb|AM942444.1| 1043415 1042870 -3 - 546 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67505.peg.877 CDS gi|171850984|emb|AM942444.1| 1044200 1043493 -2 - 708 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67505.peg.878 CDS gi|171850984|emb|AM942444.1| 1044818 1044216 -2 - 603 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67505.peg.879 CDS gi|171850984|emb|AM942444.1| 1044892 1045098 1 + 207 FIG00545605: hypothetical protein - none -
fig|6666666.67505.peg.880 CDS gi|171850984|emb|AM942444.1| 1045509 1046624 3 + 1116 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67505.peg.881 CDS gi|171850984|emb|AM942444.1| 1046660 1047274 2 + 615 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67505.peg.882 CDS gi|171850984|emb|AM942444.1| 1047355 1048908 1 + 1554 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67505.peg.883 CDS gi|171850984|emb|AM942444.1| 1048901 1049656 2 + 756 FIG00544570: hypothetical protein - none -
fig|6666666.67505.peg.884 CDS gi|171850984|emb|AM942444.1| 1051106 1049724 -2 - 1383 ATPase involved in DNA repair - none -
fig|6666666.67505.peg.885 CDS gi|171850984|emb|AM942444.1| 1051302 1052240 3 + 939 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA processing
fig|6666666.67505.peg.886 CDS gi|171850984|emb|AM942444.1| 1053061 1052237 -1 - 825 FIG00546075: hypothetical protein - none -
fig|6666666.67505.peg.887 CDS gi|171850984|emb|AM942444.1| 1053240 1054760 3 + 1521 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.67505.peg.888 CDS gi|171850984|emb|AM942444.1| 1054824 1056203 3 + 1380 xanthine/uracil permeases - none -
fig|6666666.67505.peg.889 CDS gi|171850984|emb|AM942444.1| 1057148 1056348 -2 - 801 Transcriptional repressor of the fructose operon, DeoR family - none -
fig|6666666.67505.peg.890 CDS gi|171850984|emb|AM942444.1| 1057931 1057182 -2 - 750 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67505.peg.891 CDS gi|171850984|emb|AM942444.1| 1058545 1058718 1 + 174 hypothetical protein - none -
fig|6666666.67505.peg.892 CDS gi|171850984|emb|AM942444.1| 1058886 1059320 3 + 435 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67505.peg.893 CDS gi|171850984|emb|AM942444.1| 1063487 1059375 -2 - 4113 ATP-dependent helicase HrpA - none -
fig|6666666.67505.peg.894 CDS gi|171850984|emb|AM942444.1| 1063618 1064586 1 + 969 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67505.peg.895 CDS gi|171850984|emb|AM942444.1| 1067128 1064570 -1 - 2559 putative helicase - none -
fig|6666666.67505.peg.896 CDS gi|171850984|emb|AM942444.1| 1068111 1067128 -3 - 984 FIG00544614: hypothetical protein - none -
fig|6666666.67505.peg.897 CDS gi|171850984|emb|AM942444.1| 1068291 1069691 3 + 1401 hypothetical protein - none -
fig|6666666.67505.peg.898 CDS gi|171850984|emb|AM942444.1| 1070704 1069688 -1 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.67505.peg.899 CDS gi|171850984|emb|AM942444.1| 1071487 1070768 -1 - 720 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.900 CDS gi|171850984|emb|AM942444.1| 1072601 1071579 -2 - 1023 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67505.peg.901 CDS gi|171850984|emb|AM942444.1| 1073243 1072776 -2 - 468 D-tyrosyl-tRNA(Tyr) deacylase CBSS-342610.3.peg.283;
D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67505.peg.902 CDS gi|171850984|emb|AM942444.1| 1074972 1073254 -3 - 1719 Putative transferase - none -
fig|6666666.67505.peg.903 CDS gi|171850984|emb|AM942444.1| 1075571 1075101 -2 - 471 FIG00545207: hypothetical protein - none -
fig|6666666.67505.peg.904 CDS gi|171850984|emb|AM942444.1| 1075632 1075874 3 + 243 FIG00544358: hypothetical protein - none -
fig|6666666.67505.peg.905 CDS gi|171850984|emb|AM942444.1| 1075887 1077623 3 + 1737 DNA or RNA helicases of superfamily II - none -
fig|6666666.67505.peg.906 CDS gi|171850984|emb|AM942444.1| 1077772 1078062 1 + 291 FIG00548452: hypothetical protein - none -
fig|6666666.67505.peg.907 CDS gi|171850984|emb|AM942444.1| 1079837 1078200 -2 - 1638 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.67505.peg.908 CDS gi|171850984|emb|AM942444.1| 1081095 1080190 -3 - 906 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67505.peg.909 CDS gi|171850984|emb|AM942444.1| 1081134 1082141 3 + 1008 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67505.peg.910 CDS gi|171850984|emb|AM942444.1| 1082327 1082626 2 + 300 FIG00545109: hypothetical protein - none -
fig|6666666.67505.peg.911 CDS gi|171850984|emb|AM942444.1| 1083151 1082693 -1 - 459 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67505.peg.912 CDS gi|171850984|emb|AM942444.1| 1083439 1083888 1 + 450 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67505.peg.913 CDS gi|171850984|emb|AM942444.1| 1084137 1084751 3 + 615 FIG00545882: hypothetical protein - none -
fig|6666666.67505.peg.914 CDS gi|171850984|emb|AM942444.1| 1084744 1085994 1 + 1251 FIG00431633: hypothetical protein - none -
fig|6666666.67505.peg.915 CDS gi|171850984|emb|AM942444.1| 1086038 1087954 2 + 1917 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67505.peg.916 CDS gi|171850984|emb|AM942444.1| 1088239 1089198 1 + 960 Iron compound ABC uptake transporter substrate-binding protein PiuA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.917 CDS gi|171850984|emb|AM942444.1| 1089286 1090431 1 + 1146 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67505.peg.918 CDS gi|171850984|emb|AM942444.1| 1090454 1091452 2 + 999 Iron compound ABC uptake transporter permease protein PiuC Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.919 CDS gi|171850984|emb|AM942444.1| 1091449 1092204 1 + 756 Iron compound ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.920 CDS gi|171850984|emb|AM942444.1| 1092996 1092319 -3 - 678 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67505.peg.921 CDS gi|171850984|emb|AM942444.1| 1093113 1094225 3 + 1113 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.922 CDS gi|171850984|emb|AM942444.1| 1094222 1095625 2 + 1404 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.923 CDS gi|171850984|emb|AM942444.1| 1096141 1095731 -1 - 411 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67505.peg.924 CDS gi|171850984|emb|AM942444.1| 1097418 1096153 -3 - 1266 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67505.peg.925 CDS gi|171850984|emb|AM942444.1| 1099836 1098688 -3 - 1149 Mobile element protein - none -
fig|6666666.67505.peg.926 CDS gi|171850984|emb|AM942444.1| 1100219 1100779 2 + 561 FIG00543909: hypothetical protein - none -
fig|6666666.67505.peg.927 CDS gi|171850984|emb|AM942444.1| 1100856 1101158 3 + 303 hypothetical protein - none -
fig|6666666.67505.peg.928 CDS gi|171850984|emb|AM942444.1| 1101313 1101846 1 + 534 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67505.peg.929 CDS gi|171850984|emb|AM942444.1| 1102091 1103299 2 + 1209 Dyp-type peroxidase family protein - none -
fig|6666666.67505.peg.930 CDS gi|171850984|emb|AM942444.1| 1103441 1105429 2 + 1989 Threonyl-tRNA synthetase (EC 6.1.1.3) CBSS-1806.1.peg.1285;
tRNA aminoacylation, Thr
fig|6666666.67505.peg.931 CDS gi|171850984|emb|AM942444.1| 1105602 1106171 3 + 570 FIG049476: HIT family protein CBSS-1806.1.peg.1285
fig|6666666.67505.peg.932 CDS gi|171850984|emb|AM942444.1| 1106236 1106880 1 + 645 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.933 CDS gi|171850984|emb|AM942444.1| 1106884 1107825 1 + 942 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) CBSS-1806.1.peg.1285
fig|6666666.67505.peg.934 CDS gi|171850984|emb|AM942444.1| 1107822 1109015 3 + 1194 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) CBSS-1806.1.peg.1285
fig|6666666.67505.peg.935 CDS gi|171850984|emb|AM942444.1| 1109012 1109491 2 + 480 FIG053954: Probable conserved membrane protein CBSS-1806.1.peg.1285
fig|6666666.67505.peg.936 CDS gi|171850984|emb|AM942444.1| 1109673 1110593 3 + 921 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) CBSS-1806.1.peg.1285;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67505.peg.937 CDS gi|171850984|emb|AM942444.1| 1110600 1111484 3 + 885 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II;
CBSS-1806.1.peg.1285
fig|6666666.67505.peg.938 CDS gi|171850984|emb|AM942444.1| 1111609 1111481 -1 - 129 hypothetical protein - none -
fig|6666666.67505.peg.939 CDS gi|171850984|emb|AM942444.1| 1111740 1112495 3 + 756 FIG000859: hypothetical protein YebC CBSS-1806.1.peg.1285;
Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.67505.peg.940 CDS gi|171850984|emb|AM942444.1| 1112643 1113251 3 + 609 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67505.peg.941 CDS gi|171850984|emb|AM942444.1| 1113294 1113914 3 + 621 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67505.peg.942 CDS gi|171850984|emb|AM942444.1| 1113980 1115083 2 + 1104 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67505.peg.943 CDS gi|171850984|emb|AM942444.1| 1115207 1115599 2 + 393 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.67505.peg.944 CDS gi|171850984|emb|AM942444.1| 1115765 1117606 2 + 1842 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67505.peg.945 CDS gi|171850984|emb|AM942444.1| 1117603 1118814 1 + 1212 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67505.peg.946 CDS gi|171850984|emb|AM942444.1| 1118954 1119334 2 + 381 dipeptide-binding protein DciAE - none -
fig|6666666.67505.peg.947 CDS gi|171850984|emb|AM942444.1| 1119369 1120499 3 + 1131 dipeptide-binding protein DciAE - none -
fig|6666666.67505.peg.948 CDS gi|171850984|emb|AM942444.1| 1120517 1121104 2 + 588 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67505.peg.949 CDS gi|171850984|emb|AM942444.1| 1121097 1123373 3 + 2277 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67505.peg.950 CDS gi|171850984|emb|AM942444.1| 1123439 1125037 2 + 1599 Mobile element protein - none -
fig|6666666.67505.peg.951 CDS gi|171850984|emb|AM942444.1| 1125997 1125137 -1 - 861 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.952 CDS gi|171850984|emb|AM942444.1| 1126142 1126846 2 + 705 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67505.peg.953 CDS gi|171850984|emb|AM942444.1| 1126887 1128170 3 + 1284 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67505.peg.954 CDS gi|171850984|emb|AM942444.1| 1129244 1128309 -2 - 936 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67505.peg.955 CDS gi|171850984|emb|AM942444.1| 1129340 1131160 2 + 1821 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67505.peg.956 CDS gi|171850984|emb|AM942444.1| 1131234 1132493 3 + 1260 FIG00544116: hypothetical protein - none -
fig|6666666.67505.peg.957 CDS gi|171850984|emb|AM942444.1| 1132606 1133886 1 + 1281 ATPase, AAA family - none -
fig|6666666.67505.peg.958 CDS gi|171850984|emb|AM942444.1| 1133994 1136660 3 + 2667 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67505.peg.959 CDS gi|171850984|emb|AM942444.1| 1136681 1137112 2 + 432 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.67505.peg.960 CDS gi|171850984|emb|AM942444.1| 1137323 1138477 2 + 1155 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67505.peg.961 CDS gi|171850984|emb|AM942444.1| 1138506 1139468 3 + 963 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67505.peg.962 CDS gi|171850984|emb|AM942444.1| 1139583 1140044 3 + 462 hypothetical protein - none -
fig|6666666.67505.peg.963 CDS gi|171850984|emb|AM942444.1| 1140146 1141243 2 + 1098 NADH:flavin oxidoreductase/NADH oxidase - none -
fig|6666666.67505.peg.964 CDS gi|171850984|emb|AM942444.1| 1141521 1142723 3 + 1203 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67505.peg.965 CDS gi|171850984|emb|AM942444.1| 1142755 1143324 1 + 570 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67505.peg.966 CDS gi|171850984|emb|AM942444.1| 1143413 1144522 2 + 1110 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67505.peg.967 CDS gi|171850984|emb|AM942444.1| 1144519 1144971 1 + 453 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67505.peg.968 CDS gi|171850984|emb|AM942444.1| 1145113 1146198 1 + 1086 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67505.peg.969 CDS gi|171850984|emb|AM942444.1| 1146291 1146854 3 + 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67505.peg.970 CDS gi|171850984|emb|AM942444.1| 1146880 1147626 1 + 747 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67505.peg.971 CDS gi|171850984|emb|AM942444.1| 1147802 1148437 2 + 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.67505.peg.972 CDS gi|171850984|emb|AM942444.1| 1148437 1149381 1 + 945 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67505.peg.973 CDS gi|171850984|emb|AM942444.1| 1149406 1150773 1 + 1368 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67505.peg.974 CDS gi|171850984|emb|AM942444.1| 1150834 1151988 1 + 1155 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67505.peg.975 CDS gi|171850984|emb|AM942444.1| 1152056 1155388 2 + 3333 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67505.peg.976 CDS gi|171850984|emb|AM942444.1| 1155388 1156236 1 + 849 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67505.peg.977 CDS gi|171850984|emb|AM942444.1| 1156439 1156765 2 + 327 integration host factor - none -
fig|6666666.67505.peg.978 CDS gi|171850984|emb|AM942444.1| 1156769 1157344 2 + 576 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67505.peg.979 CDS gi|171850984|emb|AM942444.1| 1157518 1157799 1 + 282 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67505.peg.980 CDS gi|171850984|emb|AM942444.1| 1157818 1159098 1 + 1281 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67505.peg.981 CDS gi|171850984|emb|AM942444.1| 1159219 1160424 1 + 1206 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis
fig|6666666.67505.peg.982 CDS gi|171850984|emb|AM942444.1| 1160587 1162632 1 + 2046 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67505.peg.983 CDS gi|171850984|emb|AM942444.1| 1162642 1163142 1 + 501 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67505.peg.984 CDS gi|171850984|emb|AM942444.1| 1163143 1164132 1 + 990 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67505.peg.985 CDS gi|171850984|emb|AM942444.1| 1164327 1165670 3 + 1344 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) RNA methylation
fig|6666666.67505.peg.986 CDS gi|171850984|emb|AM942444.1| 1165676 1166371 2 + 696 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67505.peg.987 CDS gi|171850984|emb|AM942444.1| 1166364 1167473 3 + 1110 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67505.peg.988 CDS gi|171850984|emb|AM942444.1| 1167542 1168132 2 + 591 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67505.peg.989 CDS gi|171850984|emb|AM942444.1| 1168222 1169490 1 + 1269 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67505.peg.990 CDS gi|171850984|emb|AM942444.1| 1169492 1169974 2 + 483 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67505.peg.991 CDS gi|171850984|emb|AM942444.1| 1170038 1170502 2 + 465 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67505.peg.992 CDS gi|171850984|emb|AM942444.1| 1170506 1172596 2 + 2091 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67505.peg.993 CDS gi|171850984|emb|AM942444.1| 1172602 1173147 1 + 546 hypothetical protein - none -
fig|6666666.67505.peg.994 CDS gi|171850984|emb|AM942444.1| 1173251 1173487 2 + 237 FIG000506: Predicted P-loop-containing kinase Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67505.peg.995 CDS gi|171850984|emb|AM942444.1| 1173575 1174612 2 + 1038 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67505.peg.996 CDS gi|171850984|emb|AM942444.1| 1174678 1175664 1 + 987 FIG001886: Cytoplasmic hypothetical protein Cluster containing CofD-like protein and co-occuring with DNA repair
fig|6666666.67505.peg.997 CDS gi|171850984|emb|AM942444.1| 1175797 1176822 1 + 1026 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67505.peg.998 CDS gi|171850984|emb|AM942444.1| 1176933 1178141 3 + 1209 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67505.peg.999 CDS gi|171850984|emb|AM942444.1| 1178239 1179030 1 + 792 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67505.peg.1000 CDS gi|171850984|emb|AM942444.1| 1179150 1179383 3 + 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67505.peg.1001 CDS gi|171850984|emb|AM942444.1| 1180382 1179513 -2 - 870 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67505.peg.1002 CDS gi|171850984|emb|AM942444.1| 1181440 1180427 -1 - 1014 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67505.peg.1003 CDS gi|171850984|emb|AM942444.1| 1183020 1181485 -3 - 1536 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67505.peg.1004 CDS gi|171850984|emb|AM942444.1| 1184179 1183067 -1 - 1113 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.67505.peg.1005 CDS gi|171850984|emb|AM942444.1| 1186371 1184281 -3 - 2091 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67505.peg.1006 CDS gi|171850984|emb|AM942444.1| 1186668 1187606 3 + 939 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67505.peg.1007 CDS gi|171850984|emb|AM942444.1| 1187699 1188037 2 + 339 hypothetical protein - none -
fig|6666666.67505.peg.1008 CDS gi|171850984|emb|AM942444.1| 1189280 1188207 -2 - 1074 Cytochrome oxidase assembly protein - none -
fig|6666666.67505.peg.1009 CDS gi|171850984|emb|AM942444.1| 1190329 1189421 -1 - 909 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67505.peg.1010 CDS gi|171850984|emb|AM942444.1| 1191357 1190326 -3 - 1032 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67505.peg.1011 CDS gi|171850984|emb|AM942444.1| 1192981 1191401 -1 - 1581 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67505.peg.1012 CDS gi|171850984|emb|AM942444.1| 1193259 1193930 3 + 672 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.1013 CDS gi|171850984|emb|AM942444.1| 1193938 1195368 1 + 1431 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.1014 CDS gi|171850984|emb|AM942444.1| 1195374 1196591 3 + 1218 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.1015 CDS gi|171850984|emb|AM942444.1| 1196636 1197397 2 + 762 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.1016 CDS gi|171850984|emb|AM942444.1| 1197505 1198752 1 + 1248 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.1017 CDS gi|171850984|emb|AM942444.1| 1198869 1199330 3 + 462 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67505.peg.1018 CDS gi|171850984|emb|AM942444.1| 1199404 1199808 1 + 405 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67505.peg.1019 CDS gi|171850984|emb|AM942444.1| 1200779 1199805 -2 - 975 hypothetical protein - none -
fig|6666666.67505.peg.1020 CDS gi|171850984|emb|AM942444.1| 1201143 1202774 3 + 1632 ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.1021 CDS gi|171850984|emb|AM942444.1| 1203567 1202830 -3 - 738 hypothetical protein - none -
fig|6666666.67505.peg.1022 CDS gi|171850984|emb|AM942444.1| 1205145 1203781 -3 - 1365 FIG00848225: hypothetical protein - none -
fig|6666666.67505.peg.1023 CDS gi|171850984|emb|AM942444.1| 1205426 1205157 -2 - 270 ACT domain protein - none -
fig|6666666.67505.peg.1024 CDS gi|171850984|emb|AM942444.1| 1205474 1206139 2 + 666 FIG00545571: hypothetical protein - none -
fig|6666666.67505.peg.1025 CDS gi|171850984|emb|AM942444.1| 1206703 1206149 -1 - 555 Transcriptional regulator, TetR family - none -
fig|6666666.67505.peg.1026 CDS gi|171850984|emb|AM942444.1| 1209641 1206831 -2 - 2811 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67505.peg.1027 CDS gi|171850984|emb|AM942444.1| 1210302 1210529 3 + 228 hypothetical protein - none -
fig|6666666.67505.peg.1028 CDS gi|171850984|emb|AM942444.1| 1211105 1213066 2 + 1962 cell wall-associated hydrolase - none -
fig|6666666.67505.peg.1029 CDS gi|171850984|emb|AM942444.1| 1213966 1213124 -1 - 843 hypothetical protein - none -
fig|6666666.67505.peg.1030 CDS gi|171850984|emb|AM942444.1| 1214013 1214852 3 + 840 FIG00544636: hypothetical protein - none -
fig|6666666.67505.peg.1031 CDS gi|171850984|emb|AM942444.1| 1215596 1214946 -2 - 651 FIG00545282: hypothetical protein - none -
fig|6666666.67505.peg.1032 CDS gi|171850984|emb|AM942444.1| 1216404 1215706 -3 - 699 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.67505.peg.1033 CDS gi|171850984|emb|AM942444.1| 1216727 1217290 2 + 564 Phospholipid-binding protein - none -
fig|6666666.67505.peg.1034 CDS gi|171850984|emb|AM942444.1| 1218452 1217325 -2 - 1128 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67505.peg.1035 CDS gi|171850984|emb|AM942444.1| 1219704 1218508 -3 - 1197 FIG00545923: hypothetical protein - none -
fig|6666666.67505.peg.1036 CDS gi|171850984|emb|AM942444.1| 1219769 1220596 2 + 828 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67505.peg.1037 CDS gi|171850984|emb|AM942444.1| 1220606 1221925 2 + 1320 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67505.peg.1038 CDS gi|171850984|emb|AM942444.1| 1221939 1222349 3 + 411 FIG00543988: hypothetical protein - none -
fig|6666666.67505.peg.1039 CDS gi|171850984|emb|AM942444.1| 1222458 1222730 3 + 273 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67505.peg.1040 CDS gi|171850984|emb|AM942444.1| 1222829 1223743 2 + 915 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67505.peg.1041 CDS gi|171850984|emb|AM942444.1| 1223988 1225520 3 + 1533 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67505.peg.1042 CDS gi|171850984|emb|AM942444.1| 1226351 1225524 -2 - 828 RecB family exonuclease - none -
fig|6666666.67505.peg.1043 CDS gi|171850984|emb|AM942444.1| 1227074 1226424 -2 - 651 hypothetical protein - none -
fig|6666666.67505.peg.1044 CDS gi|171850984|emb|AM942444.1| 1227137 1227970 2 + 834 RNA methyltransferase - none -
fig|6666666.67505.peg.1045 CDS gi|171850984|emb|AM942444.1| 1228071 1229687 3 + 1617 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67505.peg.1046 CDS gi|171850984|emb|AM942444.1| 1229740 1231329 1 + 1590 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67505.peg.1047 CDS gi|171850984|emb|AM942444.1| 1231395 1231592 3 + 198 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67505.peg.1048 CDS gi|171850984|emb|AM942444.1| 1231589 1233103 2 + 1515 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67505.peg.1049 CDS gi|171850984|emb|AM942444.1| 1233110 1235416 2 + 2307 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67505.peg.1050 CDS gi|171850984|emb|AM942444.1| 1235460 1235708 3 + 249 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67505.peg.1051 CDS gi|171850984|emb|AM942444.1| 1235844 1236785 3 + 942 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67505.peg.1052 CDS gi|171850984|emb|AM942444.1| 1236891 1239626 3 + 2736 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67505.peg.1053 CDS gi|171850984|emb|AM942444.1| 1239619 1240353 1 + 735 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67505.peg.1054 CDS gi|171850984|emb|AM942444.1| 1240473 1240958 3 + 486 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67505.peg.1055 CDS gi|171850984|emb|AM942444.1| 1241259 1242518 3 + 1260 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67505.peg.1056 CDS gi|171850984|emb|AM942444.1| 1242531 1243328 3 + 798 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67505.peg.1057 CDS gi|171850984|emb|AM942444.1| 1243696 1243412 -1 - 285 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67505.peg.1058 CDS gi|171850984|emb|AM942444.1| 1244070 1244309 3 + 240 FIG00546737: hypothetical protein - none -
fig|6666666.67505.peg.1059 CDS gi|171850984|emb|AM942444.1| 1244326 1245021 1 + 696 Putative secreted protein - none -
fig|6666666.67505.peg.1060 CDS gi|171850984|emb|AM942444.1| 1245075 1245254 3 + 180 FIG00549272: hypothetical protein - none -
fig|6666666.67505.peg.1061 CDS gi|171850984|emb|AM942444.1| 1245256 1246638 1 + 1383 Magnesium transporter - none -
fig|6666666.67505.peg.1062 CDS gi|171850984|emb|AM942444.1| 1247381 1246692 -2 - 690 Trk system potassium uptake protein TrkA Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.67505.peg.1063 CDS gi|171850984|emb|AM942444.1| 1248690 1247374 -3 - 1317 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.67505.peg.1064 CDS gi|171850984|emb|AM942444.1| 1250371 1248956 -1 - 1416 hypothetical protein - none -
fig|6666666.67505.peg.1065 CDS gi|171850984|emb|AM942444.1| 1251876 1250494 -3 - 1383 putative amidase - none -
fig|6666666.67505.peg.1066 CDS gi|171850984|emb|AM942444.1| 1253694 1251988 -3 - 1707 Fumarate/succinate/L-aspartate dehydrogenases - none -
fig|6666666.67505.peg.1067 CDS gi|171850984|emb|AM942444.1| 1255208 1253844 -2 - 1365 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67505.peg.1068 CDS gi|171850984|emb|AM942444.1| 1255471 1255358 -1 - 114 hypothetical protein - none -
fig|6666666.67505.peg.1069 CDS gi|171850984|emb|AM942444.1| 1255481 1256911 2 + 1431 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67505.peg.1070 CDS gi|171850984|emb|AM942444.1| 1257479 1257003 -2 - 477 FIG00544657: hypothetical protein - none -
fig|6666666.67505.peg.1071 CDS gi|171850984|emb|AM942444.1| 1257523 1259022 1 + 1500 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67505.peg.1072 CDS gi|171850984|emb|AM942444.1| 1259149 1260315 1 + 1167 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67505.peg.1073 CDS gi|171850984|emb|AM942444.1| 1260394 1261791 1 + 1398 FIG01282800: hypothetical protein - none -
fig|6666666.67505.peg.1074 CDS gi|171850984|emb|AM942444.1| 1261791 1262825 3 + 1035 FIG00546228: hypothetical protein - none -
fig|6666666.67505.peg.1075 CDS gi|171850984|emb|AM942444.1| 1262872 1263819 1 + 948 FIG00545058: hypothetical protein - none -
fig|6666666.67505.peg.1076 CDS gi|171850984|emb|AM942444.1| 1263884 1265125 2 + 1242 hypothetical protein - none -
fig|6666666.67505.peg.1077 CDS gi|171850984|emb|AM942444.1| 1265782 1265249 -1 - 534 FIG00544641: hypothetical protein - none -
fig|6666666.67505.peg.1078 CDS gi|171850984|emb|AM942444.1| 1266781 1266038 -1 - 744 FIG00545122: hypothetical protein - none -
fig|6666666.67505.peg.1079 CDS gi|171850984|emb|AM942444.1| 1267221 1266787 -3 - 435 FIG00672531: hypothetical protein - none -
fig|6666666.67505.peg.1080 CDS gi|171850984|emb|AM942444.1| 1269639 1267318 -3 - 2322 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67505.peg.1081 CDS gi|171850984|emb|AM942444.1| 1269640 1269777 1 + 138 hypothetical protein - none -
fig|6666666.67505.peg.1082 CDS gi|171850984|emb|AM942444.1| 1269774 1270271 3 + 498 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.67505.peg.1083 CDS gi|171850984|emb|AM942444.1| 1273614 1270477 -3 - 3138 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.1084 CDS gi|171850984|emb|AM942444.1| 1274800 1273607 -1 - 1194 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.1085 CDS gi|171850984|emb|AM942444.1| 1276731 1274797 -3 - 1935 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.1086 CDS gi|171850984|emb|AM942444.1| 1276765 1276962 1 + 198 hypothetical protein - none -
fig|6666666.67505.peg.1087 CDS gi|171850984|emb|AM942444.1| 1277992 1278918 1 + 927 ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.1088 CDS gi|171850984|emb|AM942444.1| 1278923 1279231 2 + 309 putative membrane protein [KO:K01992] - none -
fig|6666666.67505.peg.1089 CDS gi|171850984|emb|AM942444.1| 1279792 1279664 -1 - 129 hypothetical protein - none -
fig|6666666.67505.peg.1090 CDS gi|171850984|emb|AM942444.1| 1280563 1279955 -1 - 609 hypothetical protein - none -
fig|6666666.67505.peg.1091 CDS gi|171850984|emb|AM942444.1| 1280672 1282270 2 + 1599 Glutathione-regulated potassium-efflux system protein KefC Potassium homeostasis
fig|6666666.67505.peg.1092 CDS gi|171850984|emb|AM942444.1| 1283251 1282283 -1 - 969 membrane associated protein - none -
fig|6666666.67505.peg.1093 CDS gi|171850984|emb|AM942444.1| 1283300 1285072 2 + 1773 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67505.peg.1094 CDS gi|171850984|emb|AM942444.1| 1285212 1285826 3 + 615 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67505.peg.1095 CDS gi|171850984|emb|AM942444.1| 1288188 1285846 -3 - 2343 Cytidylate kinase (EC 2.7.4.14) / GTP-binding protein EngA Universal GTPases
fig|6666666.67505.peg.1096 CDS gi|171850984|emb|AM942444.1| 1289094 1288219 -3 - 876 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67505.peg.1097 CDS gi|171850984|emb|AM942444.1| 1289741 1289145 -2 - 597 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67505.peg.1098 CDS gi|171850984|emb|AM942444.1| 1290598 1289792 -1 - 807 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67505.peg.1099 CDS gi|171850984|emb|AM942444.1| 1291526 1290645 -2 - 882 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67505.peg.1100 CDS gi|171850984|emb|AM942444.1| 1292624 1291713 -2 - 912 Tyrosine recombinase XerD - none -
fig|6666666.67505.peg.1101 CDS gi|171850984|emb|AM942444.1| 1293641 1292640 -2 - 1002 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67505.peg.1102 CDS gi|171850984|emb|AM942444.1| 1294833 1293652 -3 - 1182 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67505.peg.1103 CDS gi|171850984|emb|AM942444.1| 1296563 1294887 -2 - 1677 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67505.peg.1104 CDS gi|171850984|emb|AM942444.1| 1297588 1296623 -1 - 966 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67505.peg.1105 CDS gi|171850984|emb|AM942444.1| 1298373 1297585 -3 - 789 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67505.peg.1106 CDS gi|171850984|emb|AM942444.1| 1298673 1298506 -3 - 168 FIG00547677: hypothetical protein - none -
fig|6666666.67505.peg.1107 CDS gi|171850984|emb|AM942444.1| 1299761 1298736 -2 - 1026 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67505.peg.1108 CDS gi|171850984|emb|AM942444.1| 1300912 1299764 -1 - 1149 TPR-repeat-containing protein - none -
fig|6666666.67505.peg.1109 CDS gi|171850984|emb|AM942444.1| 1308454 1307144 -1 - 1311 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67505.peg.1110 CDS gi|171850984|emb|AM942444.1| 1308670 1308488 -1 - 183 UPF0434 protein YcaR - none -
fig|6666666.67505.peg.1111 CDS gi|171850984|emb|AM942444.1| 1308987 1308709 -3 - 279 hypothetical protein - none -
fig|6666666.67505.peg.1112 CDS gi|171850984|emb|AM942444.1| 1308946 1310766 1 + 1821 Thiamin biosynthesis protein ThiC Thiamin biosynthesis
fig|6666666.67505.peg.1113 CDS gi|171850984|emb|AM942444.1| 1310750 1311508 2 + 759 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67505.peg.1114 CDS gi|171850984|emb|AM942444.1| 1311611 1312684 2 + 1074 FIG00548735: hypothetical protein - none -
fig|6666666.67505.peg.1115 CDS gi|171850984|emb|AM942444.1| 1312797 1314017 3 + 1221 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.67505.peg.1116 CDS gi|171850984|emb|AM942444.1| 1314091 1314297 1 + 207 thiamin biosynthesis ThiS - none -
fig|6666666.67505.peg.1117 CDS gi|171850984|emb|AM942444.1| 1314390 1315226 3 + 837 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67505.peg.1118 CDS gi|171850984|emb|AM942444.1| 1315229 1316506 2 + 1278 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67505.peg.1119 CDS gi|171850984|emb|AM942444.1| 1317992 1316526 -2 - 1467 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67505.peg.1120 CDS gi|171850984|emb|AM942444.1| 1319295 1318096 -3 - 1200 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67505.peg.1121 CDS gi|171850984|emb|AM942444.1| 1319912 1319430 -2 - 483 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67505.peg.1122 CDS gi|171850984|emb|AM942444.1| 1320835 1319897 -1 - 939 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67505.peg.1123 CDS gi|171850984|emb|AM942444.1| 1322068 1320863 -1 - 1206 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67505.peg.1124 CDS gi|171850984|emb|AM942444.1| 1323031 1322117 -1 - 915 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67505.peg.1125 CDS gi|171850984|emb|AM942444.1| 1324261 1323059 -1 - 1203 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67505.peg.1126 CDS gi|171850984|emb|AM942444.1| 1325376 1324339 -3 - 1038 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67505.peg.1127 CDS gi|171850984|emb|AM942444.1| 1328139 1325572 -3 - 2568 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67505.peg.1128 CDS gi|171850984|emb|AM942444.1| 1329273 1328212 -3 - 1062 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67505.peg.1129 CDS gi|171850984|emb|AM942444.1| 1330121 1329312 -2 - 810 FIG011178: rRNA methylase RNA methylation
fig|6666666.67505.peg.1130 CDS gi|171850984|emb|AM942444.1| 1330697 1330314 -2 - 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67505.peg.1131 CDS gi|171850984|emb|AM942444.1| 1330957 1330763 -1 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67505.peg.1132 CDS gi|171850984|emb|AM942444.1| 1331356 1330997 -1 - 360 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67505.peg.1133 CDS gi|171850984|emb|AM942444.1| 1334623 1331771 -1 - 2853 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67505.peg.1134 CDS gi|171850984|emb|AM942444.1| 1334711 1335412 2 + 702 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67505.peg.1135 CDS gi|171850984|emb|AM942444.1| 1335516 1336250 3 + 735 FIG00995839: hypothetical protein - none -
fig|6666666.67505.peg.1136 CDS gi|171850984|emb|AM942444.1| 1336272 1338656 3 + 2385 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67505.peg.1137 CDS gi|171850984|emb|AM942444.1| 1338796 1339731 1 + 936 hypothetical protein - none -
fig|6666666.67505.peg.1138 CDS gi|171850984|emb|AM942444.1| 1340306 1339872 -2 - 435 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67505.peg.1139 CDS gi|171850984|emb|AM942444.1| 1342449 1340317 -3 - 2133 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67505.peg.1140 CDS gi|171850984|emb|AM942444.1| 1343195 1342587 -2 - 609 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67505.peg.1141 CDS gi|171850984|emb|AM942444.1| 1343544 1343206 -3 - 339 hypothetical protein - none -
fig|6666666.67505.peg.1142 CDS gi|171850984|emb|AM942444.1| 1343879 1343541 -2 - 339 hypothetical protein - none -
fig|6666666.67505.peg.1143 CDS gi|171850984|emb|AM942444.1| 1343874 1344887 3 + 1014 FIG00546368: hypothetical protein - none -
fig|6666666.67505.peg.1144 CDS gi|171850984|emb|AM942444.1| 1346309 1344993 -2 - 1317 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67505.peg.1145 CDS gi|171850984|emb|AM942444.1| 1346349 1346477 3 + 129 hypothetical protein - none -
fig|6666666.67505.peg.1146 CDS gi|171850984|emb|AM942444.1| 1346622 1346491 -3 - 132 hypothetical protein - none -
fig|6666666.67505.peg.1147 CDS gi|171850984|emb|AM942444.1| 1346599 1347957 1 + 1359 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67505.peg.1148 CDS gi|171850984|emb|AM942444.1| 1348008 1348919 3 + 912 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.67505.peg.1149 CDS gi|171850984|emb|AM942444.1| 1349013 1349585 3 + 573 hypothetical protein - none -
fig|6666666.67505.peg.1150 CDS gi|171850984|emb|AM942444.1| 1350404 1349550 -2 - 855 hypothetical protein - none -
fig|6666666.67505.peg.1151 CDS gi|171850984|emb|AM942444.1| 1351985 1350525 -2 - 1461 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.67505.peg.1152 CDS gi|171850984|emb|AM942444.1| 1353203 1352067 -2 - 1137 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67505.peg.1153 CDS gi|171850984|emb|AM942444.1| 1353343 1354344 1 + 1002 Putative membrane protein - none -
fig|6666666.67505.peg.1154 CDS gi|171850984|emb|AM942444.1| 1357134 1354504 -3 - 2631 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67505.peg.1155 CDS gi|171850984|emb|AM942444.1| 1358173 1357376 -1 - 798 FIG00356309: hypothetical protein - none -
fig|6666666.67505.peg.1156 CDS gi|171850984|emb|AM942444.1| 1358960 1358166 -2 - 795 Putative ABC transport system membrane protein - none -
fig|6666666.67505.peg.1157 CDS gi|171850984|emb|AM942444.1| 1359672 1358992 -3 - 681 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67505.peg.1158 CDS gi|171850984|emb|AM942444.1| 1360802 1359672 -2 - 1131 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.67505.peg.1159 CDS gi|171850984|emb|AM942444.1| 1361971 1361027 -1 - 945 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.67505.peg.1160 CDS gi|171850984|emb|AM942444.1| 1362256 1362576 1 + 321 hypothetical protein - none -
fig|6666666.67505.peg.1161 CDS gi|171850984|emb|AM942444.1| 1362592 1364526 1 + 1935 Ferrous iron transport protein B - none -
fig|6666666.67505.peg.1162 CDS gi|171850984|emb|AM942444.1| 1365556 1364795 -1 - 762 FIG00543922: hypothetical protein - none -
fig|6666666.67505.peg.1163 CDS gi|171850984|emb|AM942444.1| 1366954 1365578 -1 - 1377 hypothetical protein - none -
fig|6666666.67505.peg.1164 CDS gi|171850984|emb|AM942444.1| 1368189 1366951 -3 - 1239 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67505.peg.1165 CDS gi|171850984|emb|AM942444.1| 1368719 1368186 -2 - 534 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67505.peg.1166 CDS gi|171850984|emb|AM942444.1| 1368767 1369774 2 + 1008 putative secreted protein - none -
fig|6666666.67505.peg.1167 CDS gi|171850984|emb|AM942444.1| 1369761 1370738 3 + 978 putative amino acid ABC transporter permease protein - none -
fig|6666666.67505.peg.1168 CDS gi|171850984|emb|AM942444.1| 1370735 1371499 2 + 765 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.1169 CDS gi|171850984|emb|AM942444.1| 1372006 1371626 -1 - 381 FIG00544156: hypothetical protein - none -
fig|6666666.67505.peg.1170 CDS gi|171850984|emb|AM942444.1| 1372056 1373414 3 + 1359 No significant database matches - none -
fig|6666666.67505.peg.1171 CDS gi|171850984|emb|AM942444.1| 1373500 1374753 1 + 1254 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67505.peg.1172 CDS gi|171850984|emb|AM942444.1| 1376235 1374901 -3 - 1335 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67505.peg.1173 CDS gi|171850984|emb|AM942444.1| 1376188 1376370 1 + 183 hypothetical protein - none -
fig|6666666.67505.peg.1174 CDS gi|171850984|emb|AM942444.1| 1377286 1376384 -1 - 903 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67505.peg.1175 CDS gi|171850984|emb|AM942444.1| 1378074 1377301 -3 - 774 Tryptophan synthase alpha chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67505.peg.1176 CDS gi|171850984|emb|AM942444.1| 1379331 1378075 -3 - 1257 Tryptophan synthase beta chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67505.peg.1177 CDS gi|171850984|emb|AM942444.1| 1380177 1379356 -3 - 822 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67505.peg.1178 CDS gi|171850984|emb|AM942444.1| 1380922 1380272 -1 - 651 FIG00545012: hypothetical protein - none -
fig|6666666.67505.peg.1179 CDS gi|171850984|emb|AM942444.1| 1382499 1380964 -3 - 1536 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67505.peg.1180 CDS gi|171850984|emb|AM942444.1| 1382847 1382503 -3 - 345 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis
fig|6666666.67505.peg.1181 CDS gi|171850984|emb|AM942444.1| 1383605 1382844 -2 - 762 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67505.peg.1182 CDS gi|171850984|emb|AM942444.1| 1384552 1383602 -1 - 951 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67505.peg.1183 CDS gi|171850984|emb|AM942444.1| 1385313 1384552 -3 - 762 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) / Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis;
Tryptophan synthesis
fig|6666666.67505.peg.1184 CDS gi|171850984|emb|AM942444.1| 1386035 1385400 -2 - 636 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67505.peg.1185 CDS gi|171850984|emb|AM942444.1| 1387479 1386157 -3 - 1323 putative transport protein - none -
fig|6666666.67505.peg.1186 CDS gi|171850984|emb|AM942444.1| 1388212 1387598 -1 - 615 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67505.peg.1187 CDS gi|171850984|emb|AM942444.1| 1389303 1388215 -3 - 1089 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67505.peg.1188 CDS gi|171850984|emb|AM942444.1| 1390615 1389296 -1 - 1320 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67505.peg.1189 CDS gi|171850984|emb|AM942444.1| 1390708 1392255 1 + 1548 FIG00546329: hypothetical protein - none -
fig|6666666.67505.peg.1190 CDS gi|171850984|emb|AM942444.1| 1392776 1392252 -2 - 525 FIG00545115: hypothetical protein - none -
fig|6666666.67505.peg.1191 CDS gi|171850984|emb|AM942444.1| 1393456 1392767 -1 - 690 FIG00545144: hypothetical protein - none -
fig|6666666.67505.peg.1192 CDS gi|171850984|emb|AM942444.1| 1393519 1394295 1 + 777 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67505.peg.1193 CDS gi|171850984|emb|AM942444.1| 1394494 1394946 1 + 453 hypothetical protein - none -
fig|6666666.67505.peg.1194 CDS gi|171850984|emb|AM942444.1| 1394992 1395984 1 + 993 FIG00544169: hypothetical protein - none -
fig|6666666.67505.peg.1195 CDS gi|171850984|emb|AM942444.1| 1396275 1395991 -3 - 285 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67505.peg.1196 CDS gi|171850984|emb|AM942444.1| 1396596 1396363 -3 - 234 FIG00544856: hypothetical protein - none -
fig|6666666.67505.peg.1197 CDS gi|171850984|emb|AM942444.1| 1397380 1396694 -1 - 687 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.67505.peg.1198 CDS gi|171850984|emb|AM942444.1| 1400999 1397433 -2 - 3567 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67505.peg.1199 CDS gi|171850984|emb|AM942444.1| 1401092 1402252 2 + 1161 L-gulono-1,4-lactone oxidase (EC 1.1.3.8) - none -
fig|6666666.67505.peg.1200 CDS gi|171850984|emb|AM942444.1| 1403151 1402249 -3 - 903 Protein rarD - none -
fig|6666666.67505.peg.1201 CDS gi|171850984|emb|AM942444.1| 1403778 1403155 -3 - 624 FIG00544566: hypothetical protein - none -
fig|6666666.67505.peg.1202 CDS gi|171850984|emb|AM942444.1| 1404712 1403768 -1 - 945 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.1203 CDS gi|171850984|emb|AM942444.1| 1405212 1404709 -3 - 504 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67505.peg.1204 CDS gi|171850984|emb|AM942444.1| 1405251 1406171 3 + 921 FIG00544955: hypothetical protein - none -
fig|6666666.67505.peg.1205 CDS gi|171850984|emb|AM942444.1| 1406734 1406219 -1 - 516 Putative secreted protein - none -
fig|6666666.67505.peg.1206 CDS gi|171850984|emb|AM942444.1| 1408265 1406832 -2 - 1434 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67505.peg.1207 CDS gi|171850984|emb|AM942444.1| 1411466 1408272 -2 - 3195 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67505.peg.1208 CDS gi|171850984|emb|AM942444.1| 1411857 1411744 -3 - 114 hypothetical protein - none -
fig|6666666.67505.peg.1209 CDS gi|171850984|emb|AM942444.1| 1412984 1411914 -2 - 1071 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67505.peg.1210 CDS gi|171850984|emb|AM942444.1| 1413452 1413165 -2 - 288 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67505.peg.1211 CDS gi|171850984|emb|AM942444.1| 1414022 1413459 -2 - 564 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67505.peg.1212 CDS gi|171850984|emb|AM942444.1| 1414789 1414079 -1 - 711 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67505.peg.1213 CDS gi|171850984|emb|AM942444.1| 1415520 1414786 -3 - 735 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67505.peg.1214 CDS gi|171850984|emb|AM942444.1| 1416791 1415526 -2 - 1266 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67505.peg.1215 CDS gi|171850984|emb|AM942444.1| 1416771 1416941 3 + 171 hypothetical protein - none -
fig|6666666.67505.peg.1216 CDS gi|171850984|emb|AM942444.1| 1417690 1417034 -1 - 657 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67505.peg.1217 CDS gi|171850984|emb|AM942444.1| 1419267 1417804 -3 - 1464 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67505.peg.1218 CDS gi|171850984|emb|AM942444.1| 1419226 1419372 1 + 147 hypothetical protein - none -
fig|6666666.67505.peg.1219 CDS gi|171850984|emb|AM942444.1| 1420521 1419388 -3 - 1134 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1220 CDS gi|171850984|emb|AM942444.1| 1422144 1420528 -3 - 1617 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67505.peg.1221 CDS gi|171850984|emb|AM942444.1| 1423625 1422144 -2 - 1482 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67505.peg.1222 CDS gi|171850984|emb|AM942444.1| 1424747 1423647 -2 - 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1223 CDS gi|171850984|emb|AM942444.1| 1426259 1424757 -2 - 1503 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67505.peg.1224 CDS gi|171850984|emb|AM942444.1| 1427878 1426277 -1 - 1602 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67505.peg.1225 CDS gi|171850984|emb|AM942444.1| 1429775 1427880 -2 - 1896 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1226 CDS gi|171850984|emb|AM942444.1| 1429782 1429895 3 + 114 hypothetical protein - none -
fig|6666666.67505.peg.1227 CDS gi|171850984|emb|AM942444.1| 1430740 1429919 -1 - 822 FIG00544004: hypothetical protein - none -
fig|6666666.67505.peg.1228 CDS gi|171850984|emb|AM942444.1| 1431893 1430832 -2 - 1062 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67505.peg.1229 CDS gi|171850984|emb|AM942444.1| 1432567 1432136 -1 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67505.peg.1230 CDS gi|171850984|emb|AM942444.1| 1433410 1433018 -1 - 393 Possible membrane protein - none -
fig|6666666.67505.peg.1231 CDS gi|171850984|emb|AM942444.1| 1434068 1433640 -2 - 429 FIG00544752: hypothetical protein - none -
fig|6666666.67505.peg.1232 CDS gi|171850984|emb|AM942444.1| 1434217 1434900 1 + 684 hypothetical protein - none -
fig|6666666.67505.peg.1233 CDS gi|171850984|emb|AM942444.1| 1435976 1434939 -2 - 1038 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67505.peg.1234 CDS gi|171850984|emb|AM942444.1| 1436208 1437392 3 + 1185 Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67505.peg.1235 CDS gi|171850984|emb|AM942444.1| 1437396 1439084 3 + 1689 Phytoene dehydrogenase (EC 1.14.99.-) Carotenoids;
Protein deglycation
fig|6666666.67505.peg.1236 CDS gi|171850984|emb|AM942444.1| 1439207 1440766 2 + 1560 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67505.peg.1237 CDS gi|171850984|emb|AM942444.1| 1441360 1443711 1 + 2352 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67505.peg.1238 CDS gi|171850984|emb|AM942444.1| 1445340 1443952 -3 - 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67505.peg.1239 CDS gi|171850984|emb|AM942444.1| 1445882 1445379 -2 - 504 FIG00544385: hypothetical protein - none -
fig|6666666.67505.peg.1240 CDS gi|171850984|emb|AM942444.1| 1447040 1445895 -2 - 1146 hypothetical membrane protein - none -
fig|6666666.67505.peg.1241 CDS gi|171850984|emb|AM942444.1| 1447929 1447186 -3 - 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.1242 CDS gi|171850984|emb|AM942444.1| 1449013 1448033 -1 - 981 glucokinase( EC:2.7.1.2 ) - none -
fig|6666666.67505.peg.1243 CDS gi|171850984|emb|AM942444.1| 1450387 1449146 -1 - 1242 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67505.peg.1244 CDS gi|171850984|emb|AM942444.1| 1451584 1450403 -1 - 1182 NLP/P60 family protein - none -
fig|6666666.67505.peg.1245 CDS gi|171850984|emb|AM942444.1| 1452543 1451917 -3 - 627 putative secreted protein - none -
fig|6666666.67505.peg.1246 CDS gi|171850984|emb|AM942444.1| 1453125 1453661 3 + 537 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67505.peg.1247 CDS gi|171850984|emb|AM942444.1| 1455559 1453922 -1 - 1638 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67505.peg.1248 CDS gi|171850984|emb|AM942444.1| 1456761 1455556 -3 - 1206 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67505.peg.1249 CDS gi|171850984|emb|AM942444.1| 1457654 1456758 -2 - 897 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67505.peg.1250 CDS gi|171850984|emb|AM942444.1| 1458307 1457723 -1 - 585 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67505.peg.1251 CDS gi|171850984|emb|AM942444.1| 1458757 1459866 1 + 1110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67505.peg.1252 CDS gi|171850984|emb|AM942444.1| 1460593 1460162 -1 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67505.peg.1253 CDS gi|171850984|emb|AM942444.1| 1461736 1460633 -1 - 1104 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67505.peg.1254 CDS gi|171850984|emb|AM942444.1| 1462080 1464038 3 + 1959 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67505.peg.1255 CDS gi|171850984|emb|AM942444.1| 1464641 1464297 -2 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67505.peg.1256 CDS gi|171850984|emb|AM942444.1| 1464802 1465512 1 + 711 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67505.peg.1257 CDS gi|171850984|emb|AM942444.1| 1465513 1466496 1 + 984 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.67505.peg.1258 CDS gi|171850984|emb|AM942444.1| 1468753 1467590 -1 - 1164 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67505.peg.1259 CDS gi|171850984|emb|AM942444.1| 1468831 1470468 1 + 1638 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67505.peg.1260 CDS gi|171850984|emb|AM942444.1| 1471093 1473282 1 + 2190 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67505.peg.1261 CDS gi|171850984|emb|AM942444.1| 1473441 1474139 3 + 699 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67505.peg.1262 CDS gi|171850984|emb|AM942444.1| 1474234 1475277 1 + 1044 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67505.peg.1263 CDS gi|171850984|emb|AM942444.1| 1475410 1476180 1 + 771 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67505.peg.1264 CDS gi|171850984|emb|AM942444.1| 1476254 1476907 2 + 654 Threonine efflux protein - none -
fig|6666666.67505.peg.1265 CDS gi|171850984|emb|AM942444.1| 1477541 1477065 -2 - 477 FIG00543905: hypothetical protein - none -
fig|6666666.67505.peg.1266 CDS gi|171850984|emb|AM942444.1| 1479535 1477652 -1 - 1884 hypothetical protein - none -
fig|6666666.67505.peg.1267 CDS gi|171850984|emb|AM942444.1| 1480274 1479537 -2 - 738 hypothetical protein - none -
fig|6666666.67505.peg.1268 CDS gi|171850984|emb|AM942444.1| 1480568 1482004 2 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1269 CDS gi|171850984|emb|AM942444.1| 1482455 1482342 -2 - 114 hypothetical protein - none -
fig|6666666.67505.peg.1270 CDS gi|171850984|emb|AM942444.1| 1482568 1483536 1 + 969 hypothetical protein - none -
fig|6666666.67505.peg.1271 CDS gi|171850984|emb|AM942444.1| 1483938 1483540 -3 - 399 DNA or RNA helicase of superfamily II - none -
fig|6666666.67505.peg.1272 CDS gi|171850984|emb|AM942444.1| 1484768 1486360 2 + 1593 hypothetical protein - none -
fig|6666666.67505.peg.1273 CDS gi|171850984|emb|AM942444.1| 1486939 1487265 1 + 327 hypothetical protein - none -
fig|6666666.67505.peg.1274 CDS gi|171850984|emb|AM942444.1| 1487758 1487507 -1 - 252 hypothetical protein - none -
fig|6666666.67505.peg.1275 CDS gi|171850984|emb|AM942444.1| 1490955 1487761 -3 - 3195 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.1276 CDS gi|171850984|emb|AM942444.1| 1492209 1490965 -3 - 1245 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.1277 CDS gi|171850984|emb|AM942444.1| 1494790 1492193 -1 - 2598 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.1278 CDS gi|171850984|emb|AM942444.1| 1495090 1494827 -1 - 264 putative helicase - none -
fig|6666666.67505.peg.1279 CDS gi|171850984|emb|AM942444.1| 1497172 1496417 -1 - 756 hypothetical protein - none -
fig|6666666.67505.peg.1280 CDS gi|171850984|emb|AM942444.1| 1498311 1497196 -3 - 1116 FIG005429: hypothetical protein - none -
fig|6666666.67505.peg.1281 CDS gi|171850984|emb|AM942444.1| 1501648 1498298 -1 - 3351 FIG007317: hypothetical protein - none -
fig|6666666.67505.peg.1282 CDS gi|171850984|emb|AM942444.1| 1502232 1501645 -3 - 588 FIG039767: hypothetical protein - none -
fig|6666666.67505.peg.1283 CDS gi|171850984|emb|AM942444.1| 1503705 1502233 -3 - 1473 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.67505.peg.1284 CDS gi|171850984|emb|AM942444.1| 1504007 1504378 2 + 372 Carboxymuconolactone decarboxylase - none -
fig|6666666.67505.peg.1285 CDS gi|171850984|emb|AM942444.1| 1504494 1506155 3 + 1662 putative transmembrane efflux protein - none -
fig|6666666.67505.peg.1286 CDS gi|171850984|emb|AM942444.1| 1507073 1506216 -2 - 858 hypothetical protein - none -
fig|6666666.67505.peg.1287 CDS gi|171850984|emb|AM942444.1| 1507642 1508835 1 + 1194 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67505.peg.1288 CDS gi|171850984|emb|AM942444.1| 1508984 1510441 2 + 1458 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1289 CDS gi|171850984|emb|AM942444.1| 1510938 1511885 3 + 948 FIG00544618: hypothetical protein - none -
fig|6666666.67505.peg.1290 CDS gi|171850984|emb|AM942444.1| 1513092 1512373 -3 - 720 hypothetical protein - none -
fig|6666666.67505.peg.1291 CDS gi|171850984|emb|AM942444.1| 1513883 1513089 -2 - 795 ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.1292 CDS gi|171850984|emb|AM942444.1| 1514242 1513880 -1 - 363 Transcriptional regulator, GntR family - none -
fig|6666666.67505.peg.1293 CDS gi|171850984|emb|AM942444.1| 1516042 1515056 -1 - 987 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67505.peg.1294 CDS gi|171850984|emb|AM942444.1| 1517845 1516394 -1 - 1452 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67505.peg.1295 CDS gi|171850984|emb|AM942444.1| 1518106 1519431 1 + 1326 hypothetical protein - none -
fig|6666666.67505.peg.1296 CDS gi|171850984|emb|AM942444.1| 1520333 1519629 -2 - 705 putative ABC transporter - none -
fig|6666666.67505.peg.1297 CDS gi|171850984|emb|AM942444.1| 1521292 1520468 -1 - 825 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.67505.peg.1298 CDS gi|171850984|emb|AM942444.1| 1521892 1521347 -1 - 546 hypothetical protein - none -
fig|6666666.67505.peg.1299 CDS gi|171850984|emb|AM942444.1| 1523190 1521916 -3 - 1275 FIG00547289: hypothetical protein - none -
fig|6666666.67505.peg.1300 CDS gi|171850984|emb|AM942444.1| 1524450 1523194 -3 - 1257 sodium:dicarboxylate symporter - none -
fig|6666666.67505.peg.1301 CDS gi|171850984|emb|AM942444.1| 1528280 1524624 -2 - 3657 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.67505.peg.1302 CDS gi|171850984|emb|AM942444.1| 1529745 1528405 -3 - 1341 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1303 CDS gi|171850984|emb|AM942444.1| 1529837 1530643 2 + 807 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.67505.peg.1304 CDS gi|171850984|emb|AM942444.1| 1533260 1530798 -2 - 2463 Cation-transporting ATPase, E1-E2 family - none -
fig|6666666.67505.peg.1305 CDS gi|171850984|emb|AM942444.1| 1533474 1533283 -3 - 192 FIG00544054: hypothetical protein - none -
fig|6666666.67505.peg.1306 CDS gi|171850984|emb|AM942444.1| 1535338 1534019 -1 - 1320 FIG006762: Phosphoglycerate mutase family - none -
fig|6666666.67505.peg.1307 CDS gi|171850984|emb|AM942444.1| 1536622 1535429 -1 - 1194 UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain - none -
fig|6666666.67505.peg.1308 CDS gi|171850984|emb|AM942444.1| 1536851 1537513 2 + 663 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.67505.peg.1309 CDS gi|171850984|emb|AM942444.1| 1537599 1538123 3 + 525 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.67505.peg.1310 CDS gi|171850984|emb|AM942444.1| 1539296 1538214 -2 - 1083 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67505.peg.1311 CDS gi|171850984|emb|AM942444.1| 1540141 1539698 -1 - 444 FIG00544601: hypothetical protein - none -
fig|6666666.67505.peg.1312 CDS gi|171850984|emb|AM942444.1| 1540445 1543273 2 + 2829 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.1313 CDS gi|171850984|emb|AM942444.1| 1543310 1543717 2 + 408 acyl carrier protein - none -
fig|6666666.67505.peg.1314 CDS gi|171850984|emb|AM942444.1| 1543761 1544642 3 + 882 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.67505.peg.1315 CDS gi|171850984|emb|AM942444.1| 1545590 1544721 -2 - 870 hypothetical protein - none -
fig|6666666.67505.peg.1316 CDS gi|171850984|emb|AM942444.1| 1546704 1545688 -3 - 1017 hypothetical protein - none -
fig|6666666.67505.peg.1317 CDS gi|171850984|emb|AM942444.1| 1546929 1547672 3 + 744 hypothetical protein - none -
fig|6666666.67505.peg.1318 CDS gi|171850984|emb|AM942444.1| 1547854 1549998 1 + 2145 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67505.peg.1319 CDS gi|171850984|emb|AM942444.1| 1550396 1551580 2 + 1185 Mobile element protein - none -
fig|6666666.67505.peg.1320 CDS gi|171850984|emb|AM942444.1| 1552433 1552062 -2 - 372 hypothetical protein - none -
fig|6666666.67505.peg.1321 CDS gi|171850984|emb|AM942444.1| 1554880 1552439 -1 - 2442 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67505.peg.1322 CDS gi|171850984|emb|AM942444.1| 1555729 1555046 -1 - 684 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.67505.peg.1323 CDS gi|171850984|emb|AM942444.1| 1556899 1555799 -1 - 1101 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.67505.peg.1324 CDS gi|171850984|emb|AM942444.1| 1557194 1557523 2 + 330 FIG00543844: hypothetical protein - none -
fig|6666666.67505.peg.1325 CDS gi|171850984|emb|AM942444.1| 1559639 1557636 -2 - 2004 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.67505.peg.1326 CDS gi|171850984|emb|AM942444.1| 1559803 1561530 1 + 1728 Cholesterol oxidase (EC 1.1.3.6) - none -
fig|6666666.67505.peg.1327 CDS gi|171850984|emb|AM942444.1| 1561560 1562063 3 + 504 putative ribonuclease - none -
fig|6666666.67505.peg.1328 CDS gi|171850984|emb|AM942444.1| 1563357 1562077 -3 - 1281 dNTP triphosphohydrolase, broad substrate specificity, subgroup 2 Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.67505.peg.1329 CDS gi|171850984|emb|AM942444.1| 1565055 1563454 -3 - 1602 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67505.peg.1330 CDS gi|171850984|emb|AM942444.1| 1565627 1565088 -2 - 540 FIG00544046: hypothetical protein - none -
fig|6666666.67505.peg.1331 CDS gi|171850984|emb|AM942444.1| 1567006 1565627 -1 - 1380 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67505.peg.1332 CDS gi|171850984|emb|AM942444.1| 1567228 1567665 1 + 438 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.67505.peg.1333 CDS gi|171850984|emb|AM942444.1| 1568858 1567662 -2 - 1197 FIG00544679: hypothetical protein - none -
fig|6666666.67505.peg.1334 CDS gi|171850984|emb|AM942444.1| 1569697 1568939 -1 - 759 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67505.peg.1335 CDS gi|171850984|emb|AM942444.1| 1570566 1569808 -3 - 759 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67505.peg.1336 CDS gi|171850984|emb|AM942444.1| 1571016 1570597 -3 - 420 FIG00547734: hypothetical protein - none -
fig|6666666.67505.peg.1337 CDS gi|171850984|emb|AM942444.1| 1571629 1571000 -1 - 630 FIG00546274: hypothetical protein - none -
fig|6666666.67505.peg.1338 CDS gi|171850984|emb|AM942444.1| 1572730 1571699 -1 - 1032 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.67505.peg.1339 CDS gi|171850984|emb|AM942444.1| 1574276 1572723 -2 - 1554 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67505.peg.1340 CDS gi|171850984|emb|AM942444.1| 1574864 1574277 -2 - 588 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67505.peg.1341 CDS gi|171850984|emb|AM942444.1| 1575916 1574864 -1 - 1053 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67505.peg.1342 CDS gi|171850984|emb|AM942444.1| 1576678 1575929 -1 - 750 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67505.peg.1343 CDS gi|171850984|emb|AM942444.1| 1577917 1576775 -1 - 1143 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67505.peg.1344 CDS gi|171850984|emb|AM942444.1| 1579034 1577964 -2 - 1071 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67505.peg.1345 CDS gi|171850984|emb|AM942444.1| 1580350 1579085 -1 - 1266 Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.1346 CDS gi|171850984|emb|AM942444.1| 1581103 1580357 -1 - 747 FIG00543880: hypothetical protein - none -
fig|6666666.67505.peg.1347 CDS gi|171850984|emb|AM942444.1| 1583110 1581275 -1 - 1836 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.1348 CDS gi|171850984|emb|AM942444.1| 1583634 1583347 -3 - 288 hypothetical protein - none -
fig|6666666.67505.peg.1349 CDS gi|171850984|emb|AM942444.1| 1585832 1583670 -2 - 2163 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67505.peg.1350 CDS gi|171850984|emb|AM942444.1| 1586825 1585899 -2 - 927 iron transport system substrate-binding protein - none -
fig|6666666.67505.peg.1351 CDS gi|171850984|emb|AM942444.1| 1587044 1588327 2 + 1284 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67505.peg.1352 CDS gi|171850984|emb|AM942444.1| 1588399 1590294 1 + 1896 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.67505.peg.1353 CDS gi|171850984|emb|AM942444.1| 1590604 1590431 -1 - 174 FIG00545890: hypothetical protein - none -
fig|6666666.67505.peg.1354 CDS gi|171850984|emb|AM942444.1| 1591533 1590682 -3 - 852 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67505.peg.1355 CDS gi|171850984|emb|AM942444.1| 1591683 1593179 3 + 1497 hypothetical protein - none -
fig|6666666.67505.peg.1356 CDS gi|171850984|emb|AM942444.1| 1593244 1594275 1 + 1032 hypothetical protein - none -
fig|6666666.67505.peg.1357 CDS gi|171850984|emb|AM942444.1| 1595256 1594363 -3 - 894 hypothetical protein - none -
fig|6666666.67505.peg.1358 CDS gi|171850984|emb|AM942444.1| 1596090 1595320 -3 - 771 FIG00545283: hypothetical protein - none -
fig|6666666.67505.peg.1359 CDS gi|171850984|emb|AM942444.1| 1596884 1596246 -2 - 639 hypothetical protein - none -
fig|6666666.67505.peg.1360 CDS gi|171850984|emb|AM942444.1| 1597022 1598071 2 + 1050 Sodium-dependent transporter - none -
fig|6666666.67505.peg.1361 CDS gi|171850984|emb|AM942444.1| 1600070 1598217 -2 - 1854 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67505.peg.1362 CDS gi|171850984|emb|AM942444.1| 1600223 1600792 2 + 570 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67505.peg.1363 CDS gi|171850984|emb|AM942444.1| 1601029 1601292 1 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.67505.peg.1364 CDS gi|171850984|emb|AM942444.1| 1601450 1602478 2 + 1029 FIG00548165: hypothetical protein - none -
fig|6666666.67505.peg.1365 CDS gi|171850984|emb|AM942444.1| 1603574 1602570 -2 - 1005 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67505.peg.1366 CDS gi|171850984|emb|AM942444.1| 1605518 1603581 -2 - 1938 ComEC/Rec2-related protein - none -
fig|6666666.67505.peg.1367 CDS gi|171850984|emb|AM942444.1| 1606741 1605785 -1 - 957 FIG00545717: hypothetical protein - none -
fig|6666666.67505.peg.1368 CDS gi|171850984|emb|AM942444.1| 1607770 1606808 -1 - 963 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67505.peg.1369 CDS gi|171850984|emb|AM942444.1| 1608552 1607779 -3 - 774 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67505.peg.1370 CDS gi|171850984|emb|AM942444.1| 1609066 1608593 -1 - 474 Iojap protein - none -
fig|6666666.67505.peg.1371 CDS gi|171850984|emb|AM942444.1| 1609833 1609183 -3 - 651 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67505.peg.1372 CDS gi|171850984|emb|AM942444.1| 1611177 1609885 -3 - 1293 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67505.peg.1373 CDS gi|171850984|emb|AM942444.1| 1612415 1611237 -2 - 1179 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.67505.peg.1374 CDS gi|171850984|emb|AM942444.1| 1614040 1612526 -1 - 1515 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.67505.peg.1375 CDS gi|171850984|emb|AM942444.1| 1614434 1614168 -2 - 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67505.peg.1376 CDS gi|171850984|emb|AM942444.1| 1614800 1614498 -2 - 303 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67505.peg.1377 CDS gi|171850984|emb|AM942444.1| 1618674 1615174 -3 - 3501 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.67505.peg.1378 CDS gi|171850984|emb|AM942444.1| 1619073 1619858 3 + 786 FIG00546902: hypothetical protein - none -
fig|6666666.67505.peg.1379 CDS gi|171850984|emb|AM942444.1| 1620349 1619939 -1 - 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.67505.peg.1380 CDS gi|171850984|emb|AM942444.1| 1620515 1622038 2 + 1524 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.1381 CDS gi|171850984|emb|AM942444.1| 1622568 1622140 -3 - 429 Possible membrane protein - none -
fig|6666666.67505.peg.1382 CDS gi|171850984|emb|AM942444.1| 1624238 1622601 -2 - 1638 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67505.peg.1383 CDS gi|171850984|emb|AM942444.1| 1627021 1624235 -1 - 2787 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67505.peg.1384 CDS gi|171850984|emb|AM942444.1| 1628149 1627145 -1 - 1005 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67505.peg.1385 CDS gi|171850984|emb|AM942444.1| 1628360 1629052 2 + 693 Transcriptional regulator, TetR family - none -
fig|6666666.67505.peg.1386 CDS gi|171850984|emb|AM942444.1| 1630417 1629143 -1 - 1275 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67505.peg.1387 CDS gi|171850984|emb|AM942444.1| 1631206 1630586 -1 - 621 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67505.peg.1388 CDS gi|171850984|emb|AM942444.1| 1631782 1631210 -1 - 573 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67505.peg.1389 CDS gi|171850984|emb|AM942444.1| 1633594 1632032 -1 - 1563 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67505.peg.1390 CDS gi|171850984|emb|AM942444.1| 1634789 1634316 -2 - 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.67505.peg.1391 CDS gi|171850984|emb|AM942444.1| 1635448 1634795 -1 - 654 FIG00544229: hypothetical protein - none -
fig|6666666.67505.peg.1392 CDS gi|171850984|emb|AM942444.1| 1635579 1638254 3 + 2676 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67505.peg.1393 CDS gi|171850984|emb|AM942444.1| 1638483 1638842 3 + 360 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67505.peg.1394 CDS gi|171850984|emb|AM942444.1| 1639636 1638839 -1 - 798 FIG00545013: hypothetical protein - none -
fig|6666666.67505.peg.1395 CDS gi|171850984|emb|AM942444.1| 1639856 1639665 -2 - 192 Protein RtcB - none -
fig|6666666.67505.peg.1396 CDS gi|171850984|emb|AM942444.1| 1640952 1639927 -3 - 1026 luciferase family protein - none -
fig|6666666.67505.peg.1397 CDS gi|171850984|emb|AM942444.1| 1642680 1641010 -3 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.1398 CDS gi|171850984|emb|AM942444.1| 1643408 1642899 -2 - 510 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67505.peg.1399 CDS gi|171850984|emb|AM942444.1| 1646046 1643746 -3 - 2301 Copper resistance protein D Copper homeostasis
fig|6666666.67505.peg.1400 CDS gi|171850984|emb|AM942444.1| 1646395 1647240 1 + 846 short-chain dehydrogenase - none -
fig|6666666.67505.peg.1401 CDS gi|171850984|emb|AM942444.1| 1647271 1647900 1 + 630 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67505.peg.1402 CDS gi|171850984|emb|AM942444.1| 1649009 1648215 -2 - 795 Mobile element protein - none -
fig|6666666.67505.peg.1403 CDS gi|171850984|emb|AM942444.1| 1649557 1649075 -1 - 483 Mobile element protein - none -
fig|6666666.67505.peg.1404 CDS gi|171850984|emb|AM942444.1| 1649773 1650003 1 + 231 hypothetical protein - none -
fig|6666666.67505.peg.1405 CDS gi|171850984|emb|AM942444.1| 1650209 1650000 -2 - 210 Copper chaperone Copper homeostasis
fig|6666666.67505.peg.1406 CDS gi|171850984|emb|AM942444.1| 1650322 1651344 1 + 1023 Phytoene synthase (EC 2.5.1.32) Carotenoids;
Protein deglycation
fig|6666666.67505.peg.1407 CDS gi|171850984|emb|AM942444.1| 1652577 1651354 -3 - 1224 putative lipoprotein - none -
fig|6666666.67505.peg.1408 CDS gi|171850984|emb|AM942444.1| 1653594 1654040 3 + 447 hypothetical protein - none -
fig|6666666.67505.peg.1409 CDS gi|171850984|emb|AM942444.1| 1654027 1654449 1 + 423 hypothetical protein - none -
fig|6666666.67505.peg.1410 CDS gi|171850984|emb|AM942444.1| 1654473 1654856 3 + 384 hypothetical protein - none -
fig|6666666.67505.peg.1411 CDS gi|171850984|emb|AM942444.1| 1654853 1655302 2 + 450 hypothetical protein - none -
fig|6666666.67505.peg.1412 CDS gi|171850984|emb|AM942444.1| 1655347 1655607 1 + 261 hypothetical protein - none -
fig|6666666.67505.peg.1413 CDS gi|171850984|emb|AM942444.1| 1655604 1655867 3 + 264 hypothetical protein - none -
fig|6666666.67505.peg.1414 CDS gi|171850984|emb|AM942444.1| 1656177 1656061 -3 - 117 hypothetical protein - none -
fig|6666666.67505.peg.1415 CDS gi|171850984|emb|AM942444.1| 1656479 1657426 2 + 948 No significant database matches - none -
fig|6666666.67505.peg.1416 CDS gi|171850984|emb|AM942444.1| 1657771 1658418 1 + 648 hypothetical protein - none -
fig|6666666.67505.peg.1417 CDS gi|171850984|emb|AM942444.1| 1659022 1659147 1 + 126 hypothetical protein - none -
fig|6666666.67505.peg.1418 CDS gi|171850984|emb|AM942444.1| 1659942 1660343 3 + 402 hypothetical protein - none -
fig|6666666.67505.peg.1419 CDS gi|171850984|emb|AM942444.1| 1660419 1660661 3 + 243 hypothetical protein - none -
fig|6666666.67505.peg.1420 CDS gi|171850984|emb|AM942444.1| 1660624 1662066 1 + 1443 hypothetical protein - none -
fig|6666666.67505.peg.1421 CDS gi|171850984|emb|AM942444.1| 1662063 1663466 3 + 1404 Phage capsid and scaffold Phage capsid proteins
fig|6666666.67505.peg.1422 CDS gi|171850984|emb|AM942444.1| 1663441 1664715 1 + 1275 hypothetical protein - none -
fig|6666666.67505.peg.1423 CDS gi|171850984|emb|AM942444.1| 1664871 1665002 3 + 132 hypothetical protein - none -
fig|6666666.67505.peg.1424 CDS gi|171850984|emb|AM942444.1| 1665189 1665725 3 + 537 hypothetical protein - none -
fig|6666666.67505.peg.1425 CDS gi|171850984|emb|AM942444.1| 1665777 1666685 3 + 909 Phage major capsid protein Phage capsid proteins
fig|6666666.67505.peg.1426 CDS gi|171850984|emb|AM942444.1| 1666699 1666884 1 + 186 hypothetical protein - none -
fig|6666666.67505.peg.1427 CDS gi|171850984|emb|AM942444.1| 1666906 1667376 1 + 471 Phage protein - none -
fig|6666666.67505.peg.1428 CDS gi|171850984|emb|AM942444.1| 1667733 1667915 3 + 183 hypothetical protein - none -
fig|6666666.67505.peg.1429 CDS gi|171850984|emb|AM942444.1| 1667915 1668154 2 + 240 hypothetical protein - none -
fig|6666666.67505.peg.1430 CDS gi|171850984|emb|AM942444.1| 1668223 1668522 1 + 300 hypothetical protein - none -
fig|6666666.67505.peg.1431 CDS gi|171850984|emb|AM942444.1| 1668596 1669261 2 + 666 Phage major tail protein - none -
fig|6666666.67505.peg.1432 CDS gi|171850984|emb|AM942444.1| 1669334 1669612 2 + 279 hypothetical protein - none -
fig|6666666.67505.peg.1433 CDS gi|171850984|emb|AM942444.1| 1669681 1670028 1 + 348 hypothetical protein - none -
fig|6666666.67505.peg.1434 CDS gi|171850984|emb|AM942444.1| 1670059 1676364 1 + 6306 hypothetical protein - none -
fig|6666666.67505.peg.1435 CDS gi|171850984|emb|AM942444.1| 1676389 1677165 1 + 777 immunity-specific protein Beta201 - none -
fig|6666666.67505.peg.1436 CDS gi|171850984|emb|AM942444.1| 1677189 1678070 3 + 882 immunity-specific protein Beta286 - none -
fig|6666666.67505.peg.1437 CDS gi|171850984|emb|AM942444.1| 1678077 1679417 3 + 1341 immunity-specific protein Beta371 - none -
fig|6666666.67505.peg.1438 CDS gi|171850984|emb|AM942444.1| 1679417 1680595 2 + 1179 probable tail fiber protein - none -
fig|6666666.67505.peg.1439 CDS gi|171850984|emb|AM942444.1| 1680600 1681961 3 + 1362 hypothetical protein - none -
fig|6666666.67505.peg.1440 CDS gi|171850984|emb|AM942444.1| 1682352 1682200 -3 - 153 hypothetical protein - none -
fig|6666666.67505.peg.1441 CDS gi|171850984|emb|AM942444.1| 1682726 1683595 2 + 870 hypothetical protein - none -
fig|6666666.67505.peg.1442 CDS gi|171850984|emb|AM942444.1| 1683599 1684081 2 + 483 hypothetical protein - none -
fig|6666666.67505.peg.1443 CDS gi|171850984|emb|AM942444.1| 1684074 1684535 3 + 462 hypothetical protein - none -
fig|6666666.67505.peg.1444 CDS gi|171850984|emb|AM942444.1| 1684525 1684872 1 + 348 hypothetical protein - none -
fig|6666666.67505.peg.1445 CDS gi|171850984|emb|AM942444.1| 1685470 1684931 -1 - 540 hypothetical protein - none -
fig|6666666.67505.peg.1446 CDS gi|171850984|emb|AM942444.1| 1686519 1685791 -3 - 729 hypothetical protein - none -
fig|6666666.67505.peg.1447 CDS gi|171850984|emb|AM942444.1| 1687487 1686690 -2 - 798 putative phage integrase - none -
fig|6666666.67505.peg.1448 CDS gi|171850984|emb|AM942444.1| 1688393 1687710 -2 - 684 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67505.peg.1449 CDS gi|171850984|emb|AM942444.1| 1689597 1688425 -3 - 1173 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67505.peg.1450 CDS gi|171850984|emb|AM942444.1| 1689769 1690491 1 + 723 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67505.peg.1451 CDS gi|171850984|emb|AM942444.1| 1690736 1691845 2 + 1110 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67505.peg.1452 CDS gi|171850984|emb|AM942444.1| 1691999 1692964 2 + 966 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67505.peg.1453 CDS gi|171850984|emb|AM942444.1| 1692969 1694168 3 + 1200 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67505.peg.1454 CDS gi|171850984|emb|AM942444.1| 1694319 1695098 3 + 780 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67505.peg.1455 CDS gi|171850984|emb|AM942444.1| 1695265 1696293 1 + 1029 putative monooxygenase - none -
fig|6666666.67505.peg.1456 CDS gi|171850984|emb|AM942444.1| 1697699 1697421 -2 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67505.peg.1457 CDS gi|171850984|emb|AM942444.1| 1697815 1698303 1 + 489 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67505.peg.1458 CDS gi|171850984|emb|AM942444.1| 1700511 1700350 -3 - 162 transposase for insertion sequence - none -
fig|6666666.67505.peg.1459 CDS gi|171850984|emb|AM942444.1| 1701838 1700918 -1 - 921 Mobile element protein - none -
fig|6666666.67505.peg.1460 CDS gi|171850984|emb|AM942444.1| 1702152 1701835 -3 - 318 Mobile element protein - none -
fig|6666666.67505.peg.1461 CDS gi|171850984|emb|AM942444.1| 1704553 1703036 -1 - 1518 hypothetical protein - none -
fig|6666666.67505.peg.1462 CDS gi|171850984|emb|AM942444.1| 1706119 1704770 -1 - 1350 Mobile element protein - none -
fig|6666666.67505.peg.1463 CDS gi|171850984|emb|AM942444.1| 1706234 1707163 2 + 930 Transposase - none -
fig|6666666.67505.peg.1464 CDS gi|171850984|emb|AM942444.1| 1708128 1707208 -3 - 921 Mobile element protein - none -
fig|6666666.67505.peg.1465 CDS gi|171850984|emb|AM942444.1| 1708442 1708125 -2 - 318 Mobile element protein - none -
fig|6666666.67505.peg.1466 CDS gi|171850984|emb|AM942444.1| 1708913 1709356 2 + 444 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67505.peg.1467 CDS gi|171850984|emb|AM942444.1| 1709411 1709791 2 + 381 FIG00543835: hypothetical protein - none -
fig|6666666.67505.peg.1468 CDS gi|171850984|emb|AM942444.1| 1711175 1709820 -2 - 1356 Metal-dependent amidase/aminoacylase/carboxypeptidase (EC 3.5.1.32) - none -
fig|6666666.67505.peg.1469 CDS gi|171850984|emb|AM942444.1| 1711896 1711258 -3 - 639 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67505.peg.1470 CDS gi|171850984|emb|AM942444.1| 1712704 1711931 -1 - 774 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67505.peg.1471 CDS gi|171850984|emb|AM942444.1| 1713532 1712726 -1 - 807 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67505.peg.1472 CDS gi|171850984|emb|AM942444.1| 1713542 1713667 2 + 126 hypothetical protein - none -
fig|6666666.67505.peg.1473 CDS gi|171850984|emb|AM942444.1| 1714554 1713688 -3 - 867 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1474 CDS gi|171850984|emb|AM942444.1| 1715248 1714664 -1 - 585 FIG00545125: hypothetical protein - none -
fig|6666666.67505.peg.1475 CDS gi|171850984|emb|AM942444.1| 1716486 1715317 -3 - 1170 possible hydrolase - none -
fig|6666666.67505.peg.1476 CDS gi|171850984|emb|AM942444.1| 1717162 1716488 -1 - 675 Transcriptional regulatory protein - none -
fig|6666666.67505.peg.1477 CDS gi|171850984|emb|AM942444.1| 1717512 1717207 -3 - 306 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67505.peg.1478 CDS gi|171850984|emb|AM942444.1| 1717667 1719052 2 + 1386 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67505.peg.1479 CDS gi|171850984|emb|AM942444.1| 1719134 1721137 2 + 2004 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67505.peg.1480 CDS gi|171850984|emb|AM942444.1| 1721287 1722858 1 + 1572 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.1481 CDS gi|171850984|emb|AM942444.1| 1723804 1722938 -1 - 867 FIG00546117: hypothetical protein - none -
fig|6666666.67505.peg.1482 CDS gi|171850984|emb|AM942444.1| 1725117 1723804 -3 - 1314 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67505.peg.1483 CDS gi|171850984|emb|AM942444.1| 1726988 1725291 -2 - 1698 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67505.peg.1484 CDS gi|171850984|emb|AM942444.1| 1728290 1727295 -2 - 996 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67505.peg.1485 CDS gi|171850984|emb|AM942444.1| 1728540 1729031 3 + 492 Putative bacterioferritin - none -
fig|6666666.67505.peg.1486 CDS gi|171850984|emb|AM942444.1| 1731320 1729161 -2 - 2160 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67505.peg.1487 CDS gi|171850984|emb|AM942444.1| 1731845 1731411 -2 - 435 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67505.peg.1488 CDS gi|171850984|emb|AM942444.1| 1733187 1731853 -3 - 1335 hypothetical protein - none -
fig|6666666.67505.peg.1489 CDS gi|171850984|emb|AM942444.1| 1733660 1733514 -2 - 147 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67505.peg.1490 CDS gi|171850984|emb|AM942444.1| 1734232 1734110 -1 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67505.peg.1491 CDS gi|171850984|emb|AM942444.1| 1734414 1735247 3 + 834 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67505.peg.1492 CDS gi|171850984|emb|AM942444.1| 1735546 1735244 -1 - 303 hypothetical protein - none -
fig|6666666.67505.peg.1493 CDS gi|171850984|emb|AM942444.1| 1736304 1735660 -3 - 645 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67505.peg.1494 CDS gi|171850984|emb|AM942444.1| 1736602 1738902 1 + 2301 FIG00545740: hypothetical protein - none -
fig|6666666.67505.peg.1495 CDS gi|171850984|emb|AM942444.1| 1738973 1739494 2 + 522 hypothetical protein - none -
fig|6666666.67505.peg.1496 CDS gi|171850984|emb|AM942444.1| 1739799 1740947 3 + 1149 Mobile element protein - none -
fig|6666666.67505.peg.1497 CDS gi|171850984|emb|AM942444.1| 1741062 1742441 3 + 1380 Mobile element protein - none -
fig|6666666.67505.peg.1498 CDS gi|171850984|emb|AM942444.1| 1742622 1743800 3 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.1499 CDS gi|171850984|emb|AM942444.1| 1744811 1744074 -2 - 738 hypothetical protein - none -
fig|6666666.67505.peg.1500 CDS gi|171850984|emb|AM942444.1| 1745105 1746592 2 + 1488 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.67505.peg.1501 CDS gi|171850984|emb|AM942444.1| 1747337 1746759 -2 - 579 hypothetical protein - none -
fig|6666666.67505.peg.1502 CDS gi|171850984|emb|AM942444.1| 1748738 1747434 -2 - 1305 C4-dicarboxylate transporter DcuA - none -
fig|6666666.67505.peg.1503 CDS gi|171850984|emb|AM942444.1| 1748724 1748882 3 + 159 hypothetical protein - none -
fig|6666666.67505.peg.1504 CDS gi|171850984|emb|AM942444.1| 1749474 1749851 3 + 378 hypothetical protein - none -
fig|6666666.67505.peg.1505 CDS gi|171850984|emb|AM942444.1| 1751545 1750478 -1 - 1068 FIG00546046: hypothetical protein - none -
fig|6666666.67505.peg.1506 CDS gi|171850984|emb|AM942444.1| 1752116 1751580 -2 - 537 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67505.peg.1507 CDS gi|171850984|emb|AM942444.1| 1753143 1752241 -3 - 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67505.peg.1508 CDS gi|171850984|emb|AM942444.1| 1753862 1753173 -2 - 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67505.peg.1509 CDS gi|171850984|emb|AM942444.1| 1754022 1755596 3 + 1575 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.67505.peg.1510 CDS gi|171850984|emb|AM942444.1| 1756025 1759534 2 + 3510 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.67505.peg.1511 CDS gi|171850984|emb|AM942444.1| 1760664 1759531 -3 - 1134 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67505.peg.1512 CDS gi|171850984|emb|AM942444.1| 1760704 1761579 1 + 876 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67505.peg.1513 CDS gi|171850984|emb|AM942444.1| 1761603 1762424 3 + 822 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67505.peg.1514 CDS gi|171850984|emb|AM942444.1| 1764116 1762515 -2 - 1602 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67505.peg.1515 CDS gi|171850984|emb|AM942444.1| 1764226 1764342 1 + 117 hypothetical protein - none -
fig|6666666.67505.peg.1516 CDS gi|171850984|emb|AM942444.1| 1764339 1766033 3 + 1695 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67505.peg.1517 CDS gi|171850984|emb|AM942444.1| 1766097 1766870 3 + 774 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) - none -
fig|6666666.67505.peg.1518 CDS gi|171850984|emb|AM942444.1| 1767127 1768680 1 + 1554 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.67505.peg.1519 CDS gi|171850984|emb|AM942444.1| 1768684 1770171 1 + 1488 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.67505.peg.1520 CDS gi|171850984|emb|AM942444.1| 1770955 1770332 -1 - 624 hypothetical protein - none -
fig|6666666.67505.peg.1521 CDS gi|171850984|emb|AM942444.1| 1771848 1770955 -3 - 894 putative secreted protein - none -
fig|6666666.67505.peg.1522 CDS gi|171850984|emb|AM942444.1| 1773145 1772273 -1 - 873 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67505.peg.1523 CDS gi|171850984|emb|AM942444.1| 1778297 1773204 -2 - 5094 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67505.peg.1524 CDS gi|171850984|emb|AM942444.1| 1778333 1779121 2 + 789 inositol monophosphatase family protein - none -
fig|6666666.67505.peg.1525 CDS gi|171850984|emb|AM942444.1| 1779181 1780002 1 + 822 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.67505.peg.1526 CDS gi|171850984|emb|AM942444.1| 1780002 1780691 3 + 690 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67505.peg.1527 CDS gi|171850984|emb|AM942444.1| 1780966 1781343 1 + 378 Putative membrane protein (Fragment) - none -
fig|6666666.67505.peg.1528 CDS gi|171850984|emb|AM942444.1| 1781393 1783000 2 + 1608 putative transport protein - none -
fig|6666666.67505.peg.1529 CDS gi|171850984|emb|AM942444.1| 1783361 1784227 2 + 867 siderophore-interacting protein - none -
fig|6666666.67505.peg.1530 CDS gi|171850984|emb|AM942444.1| 1784469 1784281 -3 - 189 hypothetical protein - none -
fig|6666666.67505.peg.1531 CDS gi|171850984|emb|AM942444.1| 1785099 1785698 3 + 600 hypothetical protein - none -
fig|6666666.67505.peg.1532 CDS gi|171850984|emb|AM942444.1| 1786187 1786411 2 + 225 hypothetical protein - none -
fig|6666666.67505.peg.1533 CDS gi|171850984|emb|AM942444.1| 1786560 1787072 3 + 513 hypothetical protein - none -
fig|6666666.67505.peg.1534 CDS gi|171850984|emb|AM942444.1| 1789220 1787877 -2 - 1344 Mobile element protein - none -
fig|6666666.67505.peg.1535 CDS gi|171850984|emb|AM942444.1| 1790763 1789345 -3 - 1419 transposase - none -
fig|6666666.67505.peg.1536 CDS gi|171850984|emb|AM942444.1| 1791946 1791242 -1 - 705 Mobile element protein - none -
fig|6666666.67505.peg.1537 CDS gi|171850984|emb|AM942444.1| 1792331 1792912 2 + 582 Aminoglycoside 3@1-phosphotransferase (EC 2.7.1.95) Aminoglycoside phosphotransferase (antibiotic) cluster
fig|6666666.67505.peg.1538 CDS gi|171850984|emb|AM942444.1| 1793069 1793773 2 + 705 Mobile element protein - none -
fig|6666666.67505.peg.1539 CDS gi|171850984|emb|AM942444.1| 1793779 1794147 1 + 369 Resolvase/integrase Bin - none -
fig|6666666.67505.peg.1540 CDS gi|171850984|emb|AM942444.1| 1794213 1795016 3 + 804 Aminoglycoside 3@1-phosphotransferase (EC 2.7.1.95) Aminoglycoside phosphotransferase (antibiotic) cluster
fig|6666666.67505.peg.1541 CDS gi|171850984|emb|AM942444.1| 1795223 1795852 2 + 630 Aminoglycoside 3@1-phosphotransferase 2 (EC 2.7.1.95) @ Streptomycin 3@1-kinase StrB (EC 2.7.1.87) Aminoglycoside phosphotransferase (antibiotic) cluster
fig|6666666.67505.peg.1542 CDS gi|171850984|emb|AM942444.1| 1797231 1796056 -3 - 1176 Chloramphenicol resistance protein - none -
fig|6666666.67505.peg.1543 CDS gi|171850984|emb|AM942444.1| 1797485 1798828 2 + 1344 putative transposase - none -
fig|6666666.67505.peg.1544 CDS gi|171850984|emb|AM942444.1| 1799008 1799166 1 + 159 hypothetical protein - none -
fig|6666666.67505.peg.1545 CDS gi|171850984|emb|AM942444.1| 1799840 1799163 -2 - 678 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.67505.peg.1546 CDS gi|171850984|emb|AM942444.1| 1801013 1799895 -2 - 1119 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67505.peg.1547 CDS gi|171850984|emb|AM942444.1| 1801168 1801974 1 + 807 putative methyltransferase - none -
fig|6666666.67505.peg.1548 CDS gi|171850984|emb|AM942444.1| 1802785 1801988 -1 - 798 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67505.peg.1549 CDS gi|171850984|emb|AM942444.1| 1803736 1802846 -1 - 891 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67505.peg.1550 CDS gi|171850984|emb|AM942444.1| 1803883 1804821 1 + 939 ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.1551 CDS gi|171850984|emb|AM942444.1| 1804818 1806002 3 + 1185 putative ABC transporter - none -
fig|6666666.67505.peg.1552 CDS gi|171850984|emb|AM942444.1| 1806933 1806124 -3 - 810 putative iron transporter ATP-binding protein - none -
fig|6666666.67505.peg.1553 CDS gi|171850984|emb|AM942444.1| 1807982 1806930 -2 - 1053 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.67505.peg.1554 CDS gi|171850984|emb|AM942444.1| 1808965 1807979 -1 - 987 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67505.peg.1555 CDS gi|171850984|emb|AM942444.1| 1810045 1809092 -1 - 954 iron-siderophore binding lipoprotein - none -
fig|6666666.67505.peg.1556 CDS gi|171850984|emb|AM942444.1| 1810825 1810466 -1 - 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67505.peg.1557 CDS gi|171850984|emb|AM942444.1| 1812274 1810991 -1 - 1284 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67505.peg.1558 CDS gi|171850984|emb|AM942444.1| 1812656 1813795 2 + 1140 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67505.peg.1559 CDS gi|171850984|emb|AM942444.1| 1813985 1815187 2 + 1203 FIG00545091: hypothetical protein - none -
fig|6666666.67505.peg.1560 CDS gi|171850984|emb|AM942444.1| 1815213 1816184 3 + 972 FIG00544583: hypothetical protein - none -
fig|6666666.67505.peg.1561 CDS gi|171850984|emb|AM942444.1| 1817084 1816224 -2 - 861 putative rRNA methylase - none -
fig|6666666.67505.peg.1562 CDS gi|171850984|emb|AM942444.1| 1818568 1817084 -1 - 1485 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67505.peg.1563 CDS gi|171850984|emb|AM942444.1| 1819528 1818776 -1 - 753 FIG00546806: hypothetical protein - none -
fig|6666666.67505.peg.1564 CDS gi|171850984|emb|AM942444.1| 1819578 1820450 3 + 873 glutamine cyclotransferase - none -
fig|6666666.67505.peg.1565 CDS gi|171850984|emb|AM942444.1| 1820567 1821217 2 + 651 FIG00545981: hypothetical protein - none -
fig|6666666.67505.peg.1566 CDS gi|171850984|emb|AM942444.1| 1821668 1821285 -2 - 384 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67505.peg.1567 CDS gi|171850984|emb|AM942444.1| 1822221 1822853 3 + 633 FIG00996461: hypothetical protein - none -
fig|6666666.67505.peg.1568 CDS gi|171850984|emb|AM942444.1| 1823218 1823027 -1 - 192 FIG00543815: hypothetical protein - none -
fig|6666666.67505.peg.1569 CDS gi|171850984|emb|AM942444.1| 1823356 1825782 1 + 2427 FIG00545438: hypothetical protein - none -
fig|6666666.67505.peg.1570 CDS gi|171850984|emb|AM942444.1| 1825907 1827487 2 + 1581 DNA repair helicase - none -
fig|6666666.67505.peg.1571 CDS gi|171850984|emb|AM942444.1| 1829285 1827504 -2 - 1782 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1572 CDS gi|171850984|emb|AM942444.1| 1829465 1829608 2 + 144 hypothetical protein - none -
fig|6666666.67505.peg.1573 CDS gi|171850984|emb|AM942444.1| 1831197 1830226 -3 - 972 putative transcriptional regulator (LysR family) - none -
fig|6666666.67505.peg.1574 CDS gi|171850984|emb|AM942444.1| 1831201 1832868 1 + 1668 DNA repair helicase - none -
fig|6666666.67505.peg.1575 CDS gi|171850984|emb|AM942444.1| 1832890 1833561 1 + 672 FIG00544717: hypothetical protein - none -
fig|6666666.67505.peg.1576 CDS gi|171850984|emb|AM942444.1| 1833686 1834138 2 + 453 Transcriptional regulator, MarR family - none -
fig|6666666.67505.peg.1577 CDS gi|171850984|emb|AM942444.1| 1834281 1835045 3 + 765 Lactam utilization protein LamB CBSS-279010.5.peg.587;
EC699-706
fig|6666666.67505.peg.1578 CDS gi|171850984|emb|AM942444.1| 1835042 1836733 2 + 1692 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) CBSS-279010.5.peg.587;
CBSS-279010.5.peg.587;
EC699-706;
EC699-706
fig|6666666.67505.peg.1579 CDS gi|171850984|emb|AM942444.1| 1836730 1838535 1 + 1806 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67505.peg.1580 CDS gi|171850984|emb|AM942444.1| 1838705 1839322 2 + 618 Transcriptional regulator, GntR family - none -
fig|6666666.67505.peg.1581 CDS gi|171850984|emb|AM942444.1| 1840185 1839397 -3 - 789 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase CBSS-279010.5.peg.587
fig|6666666.67505.peg.1582 CDS gi|171850984|emb|AM942444.1| 1841477 1840203 -2 - 1275 FIG00545033: hypothetical protein - none -
fig|6666666.67505.peg.1583 CDS gi|171850984|emb|AM942444.1| 1842713 1841679 -2 - 1035 FIG00546042: hypothetical protein - none -
fig|6666666.67505.peg.1584 CDS gi|171850984|emb|AM942444.1| 1842681 1842881 3 + 201 hypothetical protein - none -
fig|6666666.67505.peg.1585 CDS gi|171850984|emb|AM942444.1| 1842885 1844090 3 + 1206 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.67505.peg.1586 CDS gi|171850984|emb|AM942444.1| 1845683 1844166 -2 - 1518 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67505.peg.1587 CDS gi|171850984|emb|AM942444.1| 1848602 1845828 -2 - 2775 ABC-type transporter, permease component - none -
fig|6666666.67505.peg.1588 CDS gi|171850984|emb|AM942444.1| 1849372 1848602 -1 - 771 putative ABC transporter ATP-binding protein - none -
fig|6666666.67505.peg.1589 CDS gi|171850984|emb|AM942444.1| 1856964 1855756 -3 - 1209 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67505.peg.1590 CDS gi|171850984|emb|AM942444.1| 1857997 1857122 -1 - 876 Putative transcriptional regulator - none -
fig|6666666.67505.peg.1591 CDS gi|171850984|emb|AM942444.1| 1858879 1858334 -1 - 546 FIG00544325: hypothetical protein - none -
fig|6666666.67505.peg.1592 CDS gi|171850984|emb|AM942444.1| 1859728 1858955 -1 - 774 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67505.peg.1593 CDS gi|171850984|emb|AM942444.1| 1859943 1860878 3 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67505.peg.1594 CDS gi|171850984|emb|AM942444.1| 1861101 1861805 3 + 705 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67505.peg.1595 CDS gi|171850984|emb|AM942444.1| 1862102 1861809 -2 - 294 predicted acetyltransferase - none -
fig|6666666.67505.peg.1596 CDS gi|171850984|emb|AM942444.1| 1865206 1863857 -1 - 1350 Mobile element protein - none -
fig|6666666.67505.peg.1597 CDS gi|171850984|emb|AM942444.1| 1865573 1866208 2 + 636 Mobile element protein - none -
fig|6666666.67505.peg.1598 CDS gi|171850984|emb|AM942444.1| 1867653 1866274 -3 - 1380 Mobile element protein - none -
fig|6666666.67505.peg.1599 CDS gi|171850984|emb|AM942444.1| 1868303 1868148 -2 - 156 hypothetical protein - none -
fig|6666666.67505.peg.1600 CDS gi|171850984|emb|AM942444.1| 1869599 1868757 -2 - 843 hypothetical protein - none -
fig|6666666.67505.peg.1601 CDS gi|171850984|emb|AM942444.1| 1869993 1869787 -3 - 207 hypothetical protein - none -
fig|6666666.67505.peg.1602 CDS gi|171850984|emb|AM942444.1| 1870863 1870555 -3 - 309 Hydrolases of the alpha/beta superfamily - none -
fig|6666666.67505.peg.1603 CDS gi|171850984|emb|AM942444.1| 1871153 1870863 -2 - 291 hypothetical protein - none -
fig|6666666.67505.peg.1604 CDS gi|171850984|emb|AM942444.1| 1873650 1872145 -3 - 1506 putative coenzyme A transferase - none -
fig|6666666.67505.peg.1605 CDS gi|171850984|emb|AM942444.1| 1873886 1875064 2 + 1179 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67505.peg.1606 CDS gi|171850984|emb|AM942444.1| 1875696 1875139 -3 - 558 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67505.peg.1607 CDS gi|171850984|emb|AM942444.1| 1876906 1875755 -1 - 1152 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67505.peg.1608 CDS gi|171850984|emb|AM942444.1| 1877978 1876959 -2 - 1020 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67505.peg.1609 CDS gi|171850984|emb|AM942444.1| 1878118 1878987 1 + 870 FIG00544976: hypothetical protein - none -
fig|6666666.67505.peg.1610 CDS gi|171850984|emb|AM942444.1| 1878989 1879744 2 + 756 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67505.peg.1611 CDS gi|171850984|emb|AM942444.1| 1880647 1879757 -1 - 891 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67505.peg.1612 CDS gi|171850984|emb|AM942444.1| 1880834 1882009 2 + 1176 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67505.peg.1613 CDS gi|171850984|emb|AM942444.1| 1882227 1882400 3 + 174 FIG00544089: hypothetical protein - none -
fig|6666666.67505.peg.1614 CDS gi|171850984|emb|AM942444.1| 1882640 1883818 2 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.1615 CDS gi|171850984|emb|AM942444.1| 1885029 1883962 -3 - 1068 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1616 CDS gi|171850984|emb|AM942444.1| 1886684 1885080 -2 - 1605 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1617 CDS gi|171850984|emb|AM942444.1| 1886709 1886822 3 + 114 hypothetical protein - none -
fig|6666666.67505.peg.1618 CDS gi|171850984|emb|AM942444.1| 1887298 1888362 1 + 1065 acyl-CoA hydrolase - none -
fig|6666666.67505.peg.1619 CDS gi|171850984|emb|AM942444.1| 1888367 1889722 2 + 1356 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67505.peg.1620 CDS gi|171850984|emb|AM942444.1| 1889793 1890452 3 + 660 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.67505.peg.1621 CDS gi|171850984|emb|AM942444.1| 1892954 1890492 -2 - 2463 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1622 CDS gi|171850984|emb|AM942444.1| 1893681 1893013 -3 - 669 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1623 CDS gi|171850984|emb|AM942444.1| 1893923 1893678 -2 - 246 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1624 CDS gi|171850984|emb|AM942444.1| 1896298 1894082 -1 - 2217 Protease II (EC 3.4.21.83) - none -
fig|6666666.67505.peg.1625 CDS gi|171850984|emb|AM942444.1| 1896680 1897495 2 + 816 Putative secreted hydrolase - none -
fig|6666666.67505.peg.1626 CDS gi|171850984|emb|AM942444.1| 1898601 1897708 -3 - 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1627 CDS gi|171850984|emb|AM942444.1| 1899886 1898669 -1 - 1218 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67505.peg.1628 CDS gi|171850984|emb|AM942444.1| 1900351 1899932 -1 - 420 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.67505.peg.1629 CDS gi|171850984|emb|AM942444.1| 1901833 1900400 -1 - 1434 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67505.peg.1630 CDS gi|171850984|emb|AM942444.1| 1902800 1901898 -2 - 903 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67505.peg.1631 CDS gi|171850984|emb|AM942444.1| 1904096 1902819 -2 - 1278 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1632 CDS gi|171850984|emb|AM942444.1| 1904189 1904626 2 + 438 HIT family protein - none -
fig|6666666.67505.peg.1633 CDS gi|171850984|emb|AM942444.1| 1906941 1905451 -3 - 1491 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67505.peg.1634 CDS gi|171850984|emb|AM942444.1| 1907823 1907053 -3 - 771 two-component system, response regulator - none -
fig|6666666.67505.peg.1635 CDS gi|171850984|emb|AM942444.1| 1908044 1908850 2 + 807 Putative secreted protein - none -
fig|6666666.67505.peg.1636 CDS gi|171850984|emb|AM942444.1| 1908951 1909481 3 + 531 putative acetyltransferase - none -
fig|6666666.67505.peg.1637 CDS gi|171850984|emb|AM942444.1| 1911275 1909512 -2 - 1764 putative alkaline phosphatase - none -
fig|6666666.67505.peg.1638 CDS gi|171850984|emb|AM942444.1| 1911493 1911275 -1 - 219 putative phosphatase - none -
fig|6666666.67505.peg.1639 CDS gi|171850984|emb|AM942444.1| 1912527 1913234 3 + 708 SAM-dependent methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67505.peg.1640 CDS gi|171850984|emb|AM942444.1| 1913699 1913938 2 + 240 hypothetical protein - none -
fig|6666666.67505.peg.1641 CDS gi|171850984|emb|AM942444.1| 1914918 1916312 3 + 1395 TOMM biosynthesis docking scaffold (protein D) - none -
fig|6666666.67505.peg.1642 CDS gi|171850984|emb|AM942444.1| 1916765 1917157 2 + 393 TOMM biosynthesis dehydrogenase (protein B) - none -
fig|6666666.67505.peg.1643 CDS gi|171850984|emb|AM942444.1| 1917970 1918137 1 + 168 transposase for IS3525 - none -
fig|6666666.67505.peg.1644 CDS gi|171850984|emb|AM942444.1| 1918868 1918993 2 + 126 hypothetical protein - none -
fig|6666666.67505.peg.1645 CDS gi|171850984|emb|AM942444.1| 1919053 1919166 1 + 114 hypothetical protein - none -
fig|6666666.67505.peg.1646 CDS gi|171850984|emb|AM942444.1| 1919432 1920781 2 + 1350 Mobile element protein - none -
fig|6666666.67505.peg.1647 CDS gi|171850984|emb|AM942444.1| 1921890 1922453 3 + 564 Mobile element protein - none -
fig|6666666.67505.peg.1648 CDS gi|171850984|emb|AM942444.1| 1922469 1922786 3 + 318 Mobile element protein - none -
fig|6666666.67505.peg.1649 CDS gi|171850984|emb|AM942444.1| 1922783 1923697 2 + 915 Mobile element protein - none -
fig|6666666.67505.peg.1650 CDS gi|171850984|emb|AM942444.1| 1924038 1925186 3 + 1149 Mobile element protein - none -
fig|6666666.67505.peg.1651 CDS gi|171850984|emb|AM942444.1| 1925558 1927156 2 + 1599 Putative amino acid export carrier protein - none -
fig|6666666.67505.peg.1652 CDS gi|171850984|emb|AM942444.1| 1927251 1927646 3 + 396 Putative uncharacterized protein - none -
fig|6666666.67505.peg.1653 CDS gi|171850984|emb|AM942444.1| 1927701 1929260 3 + 1560 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.67505.peg.1654 CDS gi|171850984|emb|AM942444.1| 1929260 1929772 2 + 513 FIG00544334: hypothetical protein - none -
fig|6666666.67505.peg.1655 CDS gi|171850984|emb|AM942444.1| 1929836 1930789 2 + 954 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67505.peg.1656 CDS gi|171850984|emb|AM942444.1| 1932009 1930879 -3 - 1131 Transcriptional regulator, LacI family - none -
fig|6666666.67505.peg.1657 CDS gi|171850984|emb|AM942444.1| 1932001 1932120 1 + 120 hypothetical protein - none -
fig|6666666.67505.peg.1658 CDS gi|171850984|emb|AM942444.1| 1932117 1933157 3 + 1041 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67505.peg.1659 CDS gi|171850984|emb|AM942444.1| 1933154 1933855 2 + 702 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67505.peg.1660 CDS gi|171850984|emb|AM942444.1| 1933852 1934859 1 + 1008 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67505.peg.1661 CDS gi|171850984|emb|AM942444.1| 1935898 1934945 -1 - 954 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67505.peg.1662 CDS gi|171850984|emb|AM942444.1| 1936583 1935993 -2 - 591 Putative thiamine biosynthesis related protein - none -
fig|6666666.67505.peg.1663 CDS gi|171850984|emb|AM942444.1| 1936923 1937732 3 + 810 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.1664 CDS gi|171850984|emb|AM942444.1| 1937722 1938909 1 + 1188 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.1665 CDS gi|171850984|emb|AM942444.1| 1938909 1939685 3 + 777 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.1666 CDS gi|171850984|emb|AM942444.1| 1939708 1940379 1 + 672 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67505.peg.1667 CDS gi|171850984|emb|AM942444.1| 1941933 1940434 -3 - 1500 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67505.peg.1668 CDS gi|171850984|emb|AM942444.1| 1942096 1942926 1 + 831 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67505.peg.1669 CDS gi|171850984|emb|AM942444.1| 1943045 1943329 2 + 285 hypothetical protein - none -
fig|6666666.67505.peg.1670 CDS gi|171850984|emb|AM942444.1| 1943786 1943298 -2 - 489 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67505.peg.1671 CDS gi|171850984|emb|AM942444.1| 1944629 1943832 -2 - 798 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67505.peg.1672 CDS gi|171850984|emb|AM942444.1| 1945264 1944692 -1 - 573 CarD-like transcriptional regulator - none -
fig|6666666.67505.peg.1673 CDS gi|171850984|emb|AM942444.1| 1945587 1946159 3 + 573 FIG00544037: hypothetical protein - none -
fig|6666666.67505.peg.1674 CDS gi|171850984|emb|AM942444.1| 1946304 1947695 3 + 1392 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67505.peg.1675 CDS gi|171850984|emb|AM942444.1| 1948319 1947699 -2 - 621 FIG00544149: hypothetical protein - none -
fig|6666666.67505.peg.1676 CDS gi|171850984|emb|AM942444.1| 1949326 1948616 -1 - 711 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.67505.peg.1677 CDS gi|171850984|emb|AM942444.1| 1949518 1950501 1 + 984 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67505.peg.1678 CDS gi|171850984|emb|AM942444.1| 1950687 1950529 -3 - 159 hypothetical protein - none -
fig|6666666.67505.peg.1679 CDS gi|171850984|emb|AM942444.1| 1950691 1952082 1 + 1392 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67505.peg.1680 CDS gi|171850984|emb|AM942444.1| 1952167 1953540 1 + 1374 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67505.peg.1681 CDS gi|171850984|emb|AM942444.1| 1956453 1953769 -3 - 2685 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67505.peg.1682 CDS gi|171850984|emb|AM942444.1| 1956855 1958630 3 + 1776 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.1683 CDS gi|171850984|emb|AM942444.1| 1960381 1958774 -1 - 1608 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67505.peg.1684 CDS gi|171850984|emb|AM942444.1| 1961825 1960620 -2 - 1206 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.67505.peg.1685 CDS gi|171850984|emb|AM942444.1| 1963291 1961891 -1 - 1401 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67505.peg.1686 CDS gi|171850984|emb|AM942444.1| 1965079 1963484 -1 - 1596 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67505.peg.1687 CDS gi|171850984|emb|AM942444.1| 1966426 1965218 -1 - 1209 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.67505.peg.1688 CDS gi|171850984|emb|AM942444.1| 1966958 1966464 -2 - 495 Nitrite-sensitive transcriptional repressor NsrR Nitrosative stress;
Oxidative stress
fig|6666666.67505.peg.1689 CDS gi|171850984|emb|AM942444.1| 1967521 1967102 -1 - 420 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67505.peg.1690 CDS gi|171850984|emb|AM942444.1| 1968533 1967541 -2 - 993 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67505.peg.1691 CDS gi|171850984|emb|AM942444.1| 1969486 1968539 -1 - 948 FIG173306: hypothetical protein - none -
fig|6666666.67505.peg.1692 CDS gi|171850984|emb|AM942444.1| 1970751 1969534 -3 - 1218 FIG00544686: hypothetical protein - none -
fig|6666666.67505.peg.1693 CDS gi|171850984|emb|AM942444.1| 1971254 1970778 -2 - 477 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67505.peg.1694 CDS gi|171850984|emb|AM942444.1| 1971933 1971265 -3 - 669 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67505.peg.1695 CDS gi|171850984|emb|AM942444.1| 1972315 1971938 -1 - 378 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67505.peg.1696 CDS gi|171850984|emb|AM942444.1| 1973261 1972308 -2 - 954 Dihydropteroate synthase (EC 2.5.1.15) Aminoglycoside phosphotransferase (antibiotic) cluster;
Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67505.peg.1697 CDS gi|171850984|emb|AM942444.1| 1973948 1973334 -2 - 615 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.1698 CDS gi|171850984|emb|AM942444.1| 1976482 1973969 -1 - 2514 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67505.peg.1699 CDS gi|171850984|emb|AM942444.1| 1977163 1976561 -1 - 603 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67505.peg.1700 CDS gi|171850984|emb|AM942444.1| 1978409 1977156 -2 - 1254 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67505.peg.1701 CDS gi|171850984|emb|AM942444.1| 1979845 1978469 -1 - 1377 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1702 CDS gi|171850984|emb|AM942444.1| 1979989 1980471 1 + 483 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67505.peg.1703 CDS gi|171850984|emb|AM942444.1| 1981525 1982703 1 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.1704 CDS gi|171850984|emb|AM942444.1| 1982976 1983311 3 + 336 rhodanese-related sulfurtransferase - none -
fig|6666666.67505.peg.1705 CDS gi|171850984|emb|AM942444.1| 1983496 1983753 1 + 258 hypothetical protein - none -
fig|6666666.67505.peg.1706 CDS gi|171850984|emb|AM942444.1| 1984107 1985135 3 + 1029 oxidoreductase - none -
fig|6666666.67505.peg.1707 CDS gi|171850984|emb|AM942444.1| 1986154 1985255 -1 - 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67505.peg.1708 CDS gi|171850984|emb|AM942444.1| 1986741 1987076 3 + 336 hypothetical protein - none -
fig|6666666.67505.peg.1709 CDS gi|171850984|emb|AM942444.1| 1987458 1987345 -3 - 114 hypothetical protein - none -
fig|6666666.67505.peg.1710 CDS gi|171850984|emb|AM942444.1| 1987836 1987597 -3 - 240 hypothetical protein - none -
fig|6666666.67505.peg.1711 CDS gi|171850984|emb|AM942444.1| 1990069 1988426 -1 - 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67505.peg.1712 CDS gi|171850984|emb|AM942444.1| 1990289 1991701 2 + 1413 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67505.peg.1713 CDS gi|171850984|emb|AM942444.1| 1991706 1993634 3 + 1929 putative carboxylesterase - none -
fig|6666666.67505.peg.1714 CDS gi|171850984|emb|AM942444.1| 1994001 1994600 3 + 600 FIG00546460: hypothetical protein - none -
fig|6666666.67505.peg.1715 CDS gi|171850984|emb|AM942444.1| 1996025 1994841 -2 - 1185 Putative cytoplasmic protein - none -
fig|6666666.67505.peg.1716 CDS gi|171850984|emb|AM942444.1| 1997296 1996154 -1 - 1143 hypothetical protein - none -
fig|6666666.67505.peg.1717 CDS gi|171850984|emb|AM942444.1| 1997270 1997614 2 + 345 hypothetical protein - none -
fig|6666666.67505.peg.1718 CDS gi|171850984|emb|AM942444.1| 1997655 1998335 3 + 681 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67505.peg.1719 CDS gi|171850984|emb|AM942444.1| 1998354 1999520 3 + 1167 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67505.peg.1720 CDS gi|171850984|emb|AM942444.1| 1999619 2000395 2 + 777 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67505.peg.1721 CDS gi|171850984|emb|AM942444.1| 2000417 2001928 2 + 1512 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.1722 CDS gi|171850984|emb|AM942444.1| 2002080 2002625 3 + 546 putative transcriptional regulator (MarR family) - none -
fig|6666666.67505.peg.1723 CDS gi|171850984|emb|AM942444.1| 2003883 2002675 -3 - 1209 permeases of the major facilitator superfamily - none -
fig|6666666.67505.peg.1724 CDS gi|171850984|emb|AM942444.1| 2004789 2003968 -3 - 822 Putative ABC transport system membrane protein - none -
fig|6666666.67505.peg.1725 CDS gi|171850984|emb|AM942444.1| 2005837 2004797 -1 - 1041 ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.1726 CDS gi|171850984|emb|AM942444.1| 2005973 2007424 2 + 1452 FIG00543876: hypothetical protein - none -
fig|6666666.67505.peg.1727 CDS gi|171850984|emb|AM942444.1| 2007424 2008572 1 + 1149 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67505.peg.1728 CDS gi|171850984|emb|AM942444.1| 2008576 2011119 1 + 2544 serine/threonine protein kinase - none -
fig|6666666.67505.peg.1729 CDS gi|171850984|emb|AM942444.1| 2011201 2012085 1 + 885 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) - none -
fig|6666666.67505.peg.1730 CDS gi|171850984|emb|AM942444.1| 2012082 2012888 3 + 807 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) - none -
fig|6666666.67505.peg.1731 CDS gi|171850984|emb|AM942444.1| 2012957 2013469 2 + 513 Molybdenum cofactor biosynthesis protein MoaC ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67505.peg.1732 CDS gi|171850984|emb|AM942444.1| 2013456 2014628 3 + 1173 Molybdenum cofactor biosynthesis protein MoaB / Molybdenum cofactor biosynthesis protein MoaE ar-104-EC Molybdenum cofactor biosynthesis moaABCDE;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67505.peg.1733 CDS gi|171850984|emb|AM942444.1| 2015004 2016284 3 + 1281 FIG00547801: hypothetical protein - none -
fig|6666666.67505.peg.1734 CDS gi|171850984|emb|AM942444.1| 2017965 2016724 -3 - 1242 Acetate kinase (EC 2.7.2.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.1735 CDS gi|171850984|emb|AM942444.1| 2019369 2018026 -3 - 1344 Phosphate acetyltransferase (EC 2.3.1.8) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.1736 CDS gi|171850984|emb|AM942444.1| 2020857 2019787 -3 - 1071 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67505.peg.1737 CDS gi|171850984|emb|AM942444.1| 2021624 2020854 -2 - 771 FIG01282784: hypothetical protein - none -
fig|6666666.67505.peg.1738 CDS gi|171850984|emb|AM942444.1| 2022973 2021624 -1 - 1350 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67505.peg.1739 CDS gi|171850984|emb|AM942444.1| 2023920 2022973 -3 - 948 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67505.peg.1740 CDS gi|171850984|emb|AM942444.1| 2024768 2023917 -2 - 852 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation;
Inorganic Sulfur Assimilation
fig|6666666.67505.peg.1741 CDS gi|171850984|emb|AM942444.1| 2025109 2026491 1 + 1383 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.67505.peg.1742 CDS gi|171850984|emb|AM942444.1| 2026598 2027791 2 + 1194 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67505.peg.1743 CDS gi|171850984|emb|AM942444.1| 2028773 2029864 2 + 1092 alpha/beta hydrolase fold - none -
fig|6666666.67505.peg.1744 CDS gi|171850984|emb|AM942444.1| 2031638 2030001 -2 - 1638 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.1745 CDS gi|171850984|emb|AM942444.1| 2032696 2033367 1 + 672 hypothetical protein - none -
fig|6666666.67505.peg.1746 CDS gi|171850984|emb|AM942444.1| 2033515 2034321 1 + 807 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67505.peg.1747 CDS gi|171850984|emb|AM942444.1| 2034378 2035616 3 + 1239 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.67505.peg.1748 CDS gi|171850984|emb|AM942444.1| 2035654 2036736 1 + 1083 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.67505.peg.1749 CDS gi|171850984|emb|AM942444.1| 2036788 2038077 1 + 1290 D-serine dehydratase (EC 4.3.1.18) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67505.peg.1750 CDS gi|171850984|emb|AM942444.1| 2039563 2038157 -1 - 1407 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67505.peg.1751 CDS gi|171850984|emb|AM942444.1| 2039884 2039675 -1 - 210 Ferredoxin-like protein involved in electron transfer Inorganic Sulfur Assimilation
fig|6666666.67505.peg.1752 CDS gi|171850984|emb|AM942444.1| 2041560 2039881 -3 - 1680 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.67505.peg.1753 CDS gi|171850984|emb|AM942444.1| 2041850 2043313 2 + 1464 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.67505.peg.1754 CDS gi|171850984|emb|AM942444.1| 2043500 2044054 2 + 555 ElaA protein cAMP signaling in bacteria
fig|6666666.67505.peg.1755 CDS gi|171850984|emb|AM942444.1| 2044955 2044062 -2 - 894 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67505.peg.1756 CDS gi|171850984|emb|AM942444.1| 2046336 2045023 -3 - 1314 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67505.peg.1757 CDS gi|171850984|emb|AM942444.1| 2046487 2046942 1 + 456 Putative iron-sulphur protein - none -
fig|6666666.67505.peg.1758 CDS gi|171850984|emb|AM942444.1| 2048067 2046979 -3 - 1089 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.67505.peg.1759 CDS gi|171850984|emb|AM942444.1| 2048716 2048072 -1 - 645 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.67505.peg.1760 CDS gi|171850984|emb|AM942444.1| 2049507 2048761 -3 - 747 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.1761 CDS gi|171850984|emb|AM942444.1| 2049963 2052245 3 + 2283 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67505.peg.1762 CDS gi|171850984|emb|AM942444.1| 2053948 2052350 -1 - 1599 hypothetical protein - none -
fig|6666666.67505.peg.1763 CDS gi|171850984|emb|AM942444.1| 2055290 2054118 -2 - 1173 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.1764 CDS gi|171850984|emb|AM942444.1| 2055414 2056643 3 + 1230 hypothetical protein - none -
fig|6666666.67505.peg.1765 CDS gi|171850984|emb|AM942444.1| 2056654 2058450 1 + 1797 hypothetical protein - none -
fig|6666666.67505.peg.1766 CDS gi|171850984|emb|AM942444.1| 2058784 2059086 1 + 303 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67505.peg.1767 CDS gi|171850984|emb|AM942444.1| 2059147 2059458 1 + 312 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67505.peg.1768 CDS gi|171850984|emb|AM942444.1| 2059517 2061232 2 + 1716 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67505.peg.1769 CDS gi|171850984|emb|AM942444.1| 2061379 2061855 1 + 477 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67505.peg.1770 CDS gi|171850984|emb|AM942444.1| 2061836 2062630 2 + 795 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67505.peg.1771 CDS gi|171850984|emb|AM942444.1| 2062789 2063406 1 + 618 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67505.peg.1772 CDS gi|171850984|emb|AM942444.1| 2063410 2064294 1 + 885 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67505.peg.1773 CDS gi|171850984|emb|AM942444.1| 2064612 2065097 3 + 486 putative exported protein - none -
fig|6666666.67505.peg.1774 CDS gi|171850984|emb|AM942444.1| 2065460 2065098 -2 - 363 hypothetical protein - none -
fig|6666666.67505.peg.1775 CDS gi|171850984|emb|AM942444.1| 2066802 2065513 -3 - 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67505.peg.1776 CDS gi|171850984|emb|AM942444.1| 2068191 2066854 -3 - 1338 sodium/glutamate symporter - none -
fig|6666666.67505.peg.1777 CDS gi|171850984|emb|AM942444.1| 2068293 2069171 3 + 879 FIG00545467: hypothetical protein - none -
fig|6666666.67505.peg.1778 CDS gi|171850984|emb|AM942444.1| 2070485 2069184 -2 - 1302 FIG00545517: hypothetical protein - none -
fig|6666666.67505.peg.1779 CDS gi|171850984|emb|AM942444.1| 2071019 2070558 -2 - 462 FIG00544477: hypothetical protein - none -
fig|6666666.67505.peg.1780 CDS gi|171850984|emb|AM942444.1| 2072128 2071094 -1 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67505.peg.1781 CDS gi|171850984|emb|AM942444.1| 2073501 2072320 -3 - 1182 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67505.peg.1782 CDS gi|171850984|emb|AM942444.1| 2074281 2073550 -3 - 732 probable RNA methyltransferase - none -
fig|6666666.67505.peg.1783 CDS gi|171850984|emb|AM942444.1| 2075150 2074281 -2 - 870 FIG00549150: hypothetical protein - none -
fig|6666666.67505.peg.1784 CDS gi|171850984|emb|AM942444.1| 2075766 2075209 -3 - 558 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67505.peg.1785 CDS gi|171850984|emb|AM942444.1| 2077150 2075978 -1 - 1173 hypothetical protein - none -
fig|6666666.67505.peg.1786 CDS gi|171850984|emb|AM942444.1| 2079062 2077392 -2 - 1671 Putative secreted protein - none -
fig|6666666.67505.peg.1787 CDS gi|171850984|emb|AM942444.1| 2079545 2079162 -2 - 384 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67505.peg.1788 CDS gi|171850984|emb|AM942444.1| 2081021 2079831 -2 - 1191 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67505.peg.1789 CDS gi|171850984|emb|AM942444.1| 2083973 2081052 -2 - 2922 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67505.peg.1790 CDS gi|171850984|emb|AM942444.1| 2086847 2084217 -2 - 2631 FIG00946055: hypothetical protein - none -
fig|6666666.67505.peg.1791 CDS gi|171850984|emb|AM942444.1| 2088841 2086847 -1 - 1995 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.67505.peg.1792 CDS gi|171850984|emb|AM942444.1| 2089879 2088983 -1 - 897 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67505.peg.1793 CDS gi|171850984|emb|AM942444.1| 2090786 2089893 -2 - 894 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67505.peg.1794 CDS gi|171850984|emb|AM942444.1| 2091083 2091865 2 + 783 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67505.peg.1795 CDS gi|171850984|emb|AM942444.1| 2092392 2091895 -3 - 498 hypothetical protein - none -
fig|6666666.67505.peg.1796 CDS gi|171850984|emb|AM942444.1| 2092990 2092412 -1 - 579 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.67505.peg.1797 CDS gi|171850984|emb|AM942444.1| 2093883 2093002 -3 - 882 putative thiosulfate sulfurtransferase - none -
fig|6666666.67505.peg.1798 CDS gi|171850984|emb|AM942444.1| 2094049 2095164 1 + 1116 hypothetical protein - none -
fig|6666666.67505.peg.1799 CDS gi|171850984|emb|AM942444.1| 2097880 2095298 -1 - 2583 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67505.peg.1800 CDS gi|171850984|emb|AM942444.1| 2098143 2099381 3 + 1239 flavohemoprotein - none -
fig|6666666.67505.peg.1801 CDS gi|171850984|emb|AM942444.1| 2100325 2099420 -1 - 906 FIG00545709: hypothetical protein - none -
fig|6666666.67505.peg.1802 CDS gi|171850984|emb|AM942444.1| 2100392 2100511 2 + 120 hypothetical protein - none -
fig|6666666.67505.peg.1803 CDS gi|171850984|emb|AM942444.1| 2100547 2101104 1 + 558 hypothetical protein - none -
fig|6666666.67505.peg.1804 CDS gi|171850984|emb|AM942444.1| 2101104 2102393 3 + 1290 FIG00544569: hypothetical protein - none -
fig|6666666.67505.peg.1805 CDS gi|171850984|emb|AM942444.1| 2102466 2103995 3 + 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.67505.peg.1806 CDS gi|171850984|emb|AM942444.1| 2104540 2104082 -1 - 459 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67505.peg.1807 CDS gi|171850984|emb|AM942444.1| 2105772 2104567 -3 - 1206 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67505.peg.1808 CDS gi|171850984|emb|AM942444.1| 2105977 2106948 1 + 972 hypothetical protein - none -
fig|6666666.67505.peg.1809 CDS gi|171850984|emb|AM942444.1| 2108616 2107096 -3 - 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.1810 CDS gi|171850984|emb|AM942444.1| 2109578 2108916 -2 - 663 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67505.peg.1811 CDS gi|171850984|emb|AM942444.1| 2111431 2109578 -1 - 1854 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67505.peg.1812 CDS gi|171850984|emb|AM942444.1| 2111730 2112671 3 + 942 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67505.peg.1813 CDS gi|171850984|emb|AM942444.1| 2112889 2116503 1 + 3615 Fe-S oxidoreductase - none -
fig|6666666.67505.peg.1814 CDS gi|171850984|emb|AM942444.1| 2117319 2116699 -3 - 621 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.67505.peg.1815 CDS gi|171850984|emb|AM942444.1| 2118379 2117360 -1 - 1020 FIG00548436: hypothetical protein - none -
fig|6666666.67505.peg.1816 CDS gi|171850984|emb|AM942444.1| 2118385 2118867 1 + 483 Mobile element protein - none -
fig|6666666.67505.peg.1817 CDS gi|171850984|emb|AM942444.1| 2119759 2118875 -1 - 885 Mobile element protein - none -
fig|6666666.67505.peg.1818 CDS gi|171850984|emb|AM942444.1| 2120067 2119756 -3 - 312 Mobile element protein - none -
fig|6666666.67505.peg.1819 CDS gi|171850984|emb|AM942444.1| 2121051 2120167 -3 - 885 Mobile element protein - none -
fig|6666666.67505.peg.1820 CDS gi|171850984|emb|AM942444.1| 2121341 2121048 -2 - 294 Mobile element protein - none -
fig|6666666.67505.peg.1821 CDS gi|171850984|emb|AM942444.1| 2121818 2121378 -2 - 441 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67505.peg.1822 CDS gi|171850984|emb|AM942444.1| 2121892 2122020 1 + 129 Mobile element protein - none -
fig|6666666.67505.peg.1823 CDS gi|171850984|emb|AM942444.1| 2122126 2122605 1 + 480 Mobile element protein - none -
fig|6666666.67505.peg.1824 CDS gi|171850984|emb|AM942444.1| 2122912 2122628 -1 - 285 hypothetical protein - none -
fig|6666666.67505.peg.1825 CDS gi|171850984|emb|AM942444.1| 2123289 2124317 3 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67505.peg.1826 CDS gi|171850984|emb|AM942444.1| 2124472 2124792 1 + 321 putative sodium/glutamate symporter - none -
fig|6666666.67505.peg.1827 CDS gi|171850984|emb|AM942444.1| 2125419 2125291 -3 - 129 Mobile element protein - none -
fig|6666666.67505.peg.1828 CDS gi|171850984|emb|AM942444.1| 2125461 2125733 3 + 273 Mobile element protein - none -
fig|6666666.67505.peg.1829 CDS gi|171850984|emb|AM942444.1| 2126061 2126927 3 + 867 hypothetical protein - none -
fig|6666666.67505.peg.1830 CDS gi|171850984|emb|AM942444.1| 2126973 2128217 3 + 1245 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67505.peg.1831 CDS gi|171850984|emb|AM942444.1| 2129770 2128301 -1 - 1470 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67505.peg.1832 CDS gi|171850984|emb|AM942444.1| 2130396 2129830 -3 - 567 Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming) - none -
fig|6666666.67505.peg.1833 CDS gi|171850984|emb|AM942444.1| 2130902 2130783 -2 - 120 hypothetical protein - none -
fig|6666666.67505.peg.1834 CDS gi|171850984|emb|AM942444.1| 2130867 2132318 3 + 1452 putative integral membrane protein - none -
fig|6666666.67505.peg.1835 CDS gi|171850984|emb|AM942444.1| 2132424 2133968 3 + 1545 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.67505.peg.1836 CDS gi|171850984|emb|AM942444.1| 2135179 2134058 -1 - 1122 FIG00545174: hypothetical protein - none -
fig|6666666.67505.peg.1837 CDS gi|171850984|emb|AM942444.1| 2136840 2135416 -3 - 1425 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.67505.peg.1838 CDS gi|171850984|emb|AM942444.1| 2137232 2138356 2 + 1125 FIG00545899: hypothetical protein - none -
fig|6666666.67505.peg.1839 CDS gi|171850984|emb|AM942444.1| 2138436 2139764 3 + 1329 FIG00546951: hypothetical protein - none -
fig|6666666.67505.peg.1840 CDS gi|171850984|emb|AM942444.1| 2141029 2139761 -1 - 1269 putative permease of the major facilitator superfamily - none -
fig|6666666.67505.peg.1841 CDS gi|171850984|emb|AM942444.1| 2141126 2143210 2 + 2085 Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) - none -
fig|6666666.67505.peg.1842 CDS gi|171850984|emb|AM942444.1| 2143327 2145162 1 + 1836 hypothetical protein - none -
fig|6666666.67505.peg.1843 CDS gi|171850984|emb|AM942444.1| 2146786 2145491 -1 - 1296 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67505.peg.1844 CDS gi|171850984|emb|AM942444.1| 2146887 2148362 3 + 1476 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67505.peg.1845 CDS gi|171850984|emb|AM942444.1| 2151546 2148613 -3 - 2934 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67505.peg.1846 CDS gi|171850984|emb|AM942444.1| 2152054 2151851 -1 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67505.peg.1847 CDS gi|171850984|emb|AM942444.1| 2152283 2154721 2 + 2439 FIG00545284: hypothetical protein - none -
fig|6666666.67505.peg.1848 CDS gi|171850984|emb|AM942444.1| 2155143 2156606 3 + 1464 FIG00546254: hypothetical protein - none -
fig|6666666.67505.peg.1849 CDS gi|171850984|emb|AM942444.1| 2157105 2156800 -3 - 306 FIG00545374: hypothetical protein - none -
fig|6666666.67505.peg.1850 CDS gi|171850984|emb|AM942444.1| 2157403 2157083 -1 - 321 FIG00544831: hypothetical protein - none -
fig|6666666.67505.peg.1851 CDS gi|171850984|emb|AM942444.1| 2157679 2157404 -1 - 276 FIG01255695: hypothetical protein - none -
fig|6666666.67505.peg.1852 CDS gi|171850984|emb|AM942444.1| 2158991 2157831 -2 - 1161 FIG00544993: hypothetical protein - none -
fig|6666666.67505.peg.1853 CDS gi|171850984|emb|AM942444.1| 2160286 2158988 -1 - 1299 Flp pilus assembly protein, ATPase CpaF - none -
fig|6666666.67505.peg.1854 CDS gi|171850984|emb|AM942444.1| 2161325 2160273 -2 - 1053 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.67505.peg.1855 CDS gi|171850984|emb|AM942444.1| 2161711 2162526 1 + 816 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67505.peg.1856 CDS gi|171850984|emb|AM942444.1| 2163359 2162556 -2 - 804 FIG00544328: hypothetical protein - none -
fig|6666666.67505.peg.1857 CDS gi|171850984|emb|AM942444.1| 2163462 2163980 3 + 519 FIG00544230: hypothetical protein - none -
fig|6666666.67505.peg.1858 CDS gi|171850984|emb|AM942444.1| 2164123 2164938 1 + 816 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.67505.peg.1859 CDS gi|171850984|emb|AM942444.1| 2166174 2164981 -3 - 1194 putative serine protease - none -
fig|6666666.67505.peg.1860 CDS gi|171850984|emb|AM942444.1| 2166998 2166186 -2 - 813 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67505.peg.1861 CDS gi|171850984|emb|AM942444.1| 2167362 2167003 -3 - 360 FIG00544760: hypothetical protein - none -
fig|6666666.67505.peg.1862 CDS gi|171850984|emb|AM942444.1| 2167852 2167385 -1 - 468 hypothetical protein - none -
fig|6666666.67505.peg.1863 CDS gi|171850984|emb|AM942444.1| 2168426 2167857 -2 - 570 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67505.peg.1864 CDS gi|171850984|emb|AM942444.1| 2168713 2169396 1 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67505.peg.1865 CDS gi|171850984|emb|AM942444.1| 2170436 2169573 -2 - 864 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67505.peg.1866 CDS gi|171850984|emb|AM942444.1| 2170959 2170471 -3 - 489 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67505.peg.1867 CDS gi|171850984|emb|AM942444.1| 2171129 2170962 -2 - 168 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67505.peg.1868 CDS gi|171850984|emb|AM942444.1| 2171685 2171302 -3 - 384 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67505.peg.1869 CDS gi|171850984|emb|AM942444.1| 2172246 2174390 3 + 2145 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1870 CDS gi|171850984|emb|AM942444.1| 2174494 2175567 1 + 1074 putative secreted protein - none -
fig|6666666.67505.peg.1871 CDS gi|171850984|emb|AM942444.1| 2177462 2175864 -2 - 1599 Mobile element protein - none -
fig|6666666.67505.peg.1872 CDS gi|171850984|emb|AM942444.1| 2177567 2178946 2 + 1380 Mobile element protein - none -
fig|6666666.67505.peg.1873 CDS gi|171850984|emb|AM942444.1| 2180189 2179011 -2 - 1179 Mobile element protein - none -
fig|6666666.67505.peg.1874 CDS gi|171850984|emb|AM942444.1| 2180823 2184194 3 + 3372 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67505.peg.1875 CDS gi|171850984|emb|AM942444.1| 2184191 2184706 2 + 516 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67505.peg.1876 CDS gi|171850984|emb|AM942444.1| 2184706 2186472 1 + 1767 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67505.peg.1877 CDS gi|171850984|emb|AM942444.1| 2186472 2187185 3 + 714 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67505.peg.1878 CDS gi|171850984|emb|AM942444.1| 2187186 2187464 3 + 279 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67505.peg.1879 CDS gi|171850984|emb|AM942444.1| 2187468 2187890 3 + 423 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67505.peg.1880 CDS gi|171850984|emb|AM942444.1| 2188406 2187981 -2 - 426 Organic hydroperoxide resistance protein CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.67505.peg.1881 CDS gi|171850984|emb|AM942444.1| 2190074 2188458 -2 - 1617 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67505.peg.1882 CDS gi|171850984|emb|AM942444.1| 2190303 2190965 3 + 663 RNA polymerase sigma factor - none -
fig|6666666.67505.peg.1883 CDS gi|171850984|emb|AM942444.1| 2191012 2192496 1 + 1485 Cell division inhibitor Persister Cells
fig|6666666.67505.peg.1884 CDS gi|171850984|emb|AM942444.1| 2192500 2193765 1 + 1266 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67505.peg.1885 CDS gi|171850984|emb|AM942444.1| 2193910 2195445 1 + 1536 hypothetical protein - none -
fig|6666666.67505.peg.1886 CDS gi|171850984|emb|AM942444.1| 2196708 2195671 -3 - 1038 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67505.peg.1887 CDS gi|171850984|emb|AM942444.1| 2198027 2196762 -2 - 1266 Aspartokinase (EC 2.7.2.4) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67505.peg.1888 CDS gi|171850984|emb|AM942444.1| 2198193 2199041 3 + 849 FIG00544278: hypothetical protein - none -
fig|6666666.67505.peg.1889 CDS gi|171850984|emb|AM942444.1| 2199144 2200919 3 + 1776 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.1890 CDS gi|171850984|emb|AM942444.1| 2201128 2200916 -1 - 213 hypothetical protein - none -
fig|6666666.67505.peg.1891 CDS gi|171850984|emb|AM942444.1| 2201171 2202607 2 + 1437 putative secreted protein - none -
fig|6666666.67505.peg.1892 CDS gi|171850984|emb|AM942444.1| 2202638 2204080 2 + 1443 hypothetical protein - none -
fig|6666666.67505.peg.1893 CDS gi|171850984|emb|AM942444.1| 2207469 2204227 -3 - 3243 Putative surface-anchored fimbrial subunit - none -
fig|6666666.67505.peg.1894 CDS gi|171850984|emb|AM942444.1| 2208341 2207475 -2 - 867 Putative surface anchored protein - none -
fig|6666666.67505.peg.1895 CDS gi|171850984|emb|AM942444.1| 2209251 2208313 -3 - 939 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67505.peg.1896 CDS gi|171850984|emb|AM942444.1| 2210831 2209350 -2 - 1482 Cell wall surface anchor family protein Sortase
fig|6666666.67505.peg.1897 CDS gi|171850984|emb|AM942444.1| 2211369 2212379 3 + 1011 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67505.peg.1898 CDS gi|171850984|emb|AM942444.1| 2212421 2212606 2 + 186 hypothetical protein - none -
fig|6666666.67505.peg.1899 CDS gi|171850984|emb|AM942444.1| 2212786 2214627 1 + 1842 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67505.peg.1900 CDS gi|171850984|emb|AM942444.1| 2216814 2215402 -3 - 1413 cationic amino acid transporter - none -
fig|6666666.67505.peg.1901 CDS gi|171850984|emb|AM942444.1| 2218432 2216807 -1 - 1626 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67505.peg.1902 CDS gi|171850984|emb|AM942444.1| 2218842 2218429 -3 - 414 hypothetical protein - none -
fig|6666666.67505.peg.1903 CDS gi|171850984|emb|AM942444.1| 2219053 2220873 1 + 1821 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67505.peg.1904 CDS gi|171850984|emb|AM942444.1| 2220863 2222377 2 + 1515 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67505.peg.1905 CDS gi|171850984|emb|AM942444.1| 2222377 2223483 1 + 1107 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67505.peg.1906 CDS gi|171850984|emb|AM942444.1| 2225998 2224058 -1 - 1941 FIG00447935: hypothetical protein - none -
fig|6666666.67505.peg.1907 CDS gi|171850984|emb|AM942444.1| 2226406 2227431 1 + 1026 monooxygenase, putative - none -
fig|6666666.67505.peg.1908 CDS gi|171850984|emb|AM942444.1| 2228599 2227778 -1 - 822 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67505.peg.1909 CDS gi|171850984|emb|AM942444.1| 2229006 2228689 -3 - 318 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67505.peg.1910 CDS gi|171850984|emb|AM942444.1| 2232127 2229125 -1 - 3003 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67505.peg.1911 CDS gi|171850984|emb|AM942444.1| 2232143 2232427 2 + 285 FIG00546238: hypothetical protein - none -
fig|6666666.67505.peg.1912 CDS gi|171850984|emb|AM942444.1| 2232776 2232489 -2 - 288 hypothetical protein - none -
fig|6666666.67505.peg.1913 CDS gi|171850984|emb|AM942444.1| 2233894 2233214 -1 - 681 FIG00544659: hypothetical protein - none -
fig|6666666.67505.peg.1914 CDS gi|171850984|emb|AM942444.1| 2235225 2233927 -3 - 1299 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67505.peg.1915 CDS gi|171850984|emb|AM942444.1| 2236705 2235356 -1 - 1350 Mobile element protein - none -
fig|6666666.67505.peg.1916 CDS gi|171850984|emb|AM942444.1| 2236954 2238138 1 + 1185 Mobile element protein - none -
fig|6666666.67505.peg.1917 CDS gi|171850984|emb|AM942444.1| 2238360 2239538 3 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.1918 CDS gi|171850984|emb|AM942444.1| 2239729 2240907 1 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.1919 CDS gi|171850984|emb|AM942444.1| 2242351 2242193 -1 - 159 hypothetical protein - none -
fig|6666666.67505.peg.1920 CDS gi|171850984|emb|AM942444.1| 2242869 2244047 3 + 1179 Mobile element protein - none -
fig|6666666.67505.peg.1921 CDS gi|171850984|emb|AM942444.1| 2244901 2244599 -1 - 303 hypothetical protein - none -
fig|6666666.67505.peg.1922 CDS gi|171850984|emb|AM942444.1| 2246213 2245029 -2 - 1185 Mobile element protein - none -
fig|6666666.67505.peg.1923 CDS gi|171850984|emb|AM942444.1| 2247717 2246368 -3 - 1350 Mobile element protein - none -
fig|6666666.67505.peg.1924 CDS gi|171850984|emb|AM942444.1| 2247778 2247987 1 + 210 hypothetical protein - none -
fig|6666666.67505.peg.1925 CDS gi|171850984|emb|AM942444.1| 2248126 2249013 1 + 888 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67505.peg.1926 CDS gi|171850984|emb|AM942444.1| 2250068 2249010 -2 - 1059 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.1927 CDS gi|171850984|emb|AM942444.1| 2251416 2250061 -3 - 1356 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.1928 CDS gi|171850984|emb|AM942444.1| 2253859 2251454 -1 - 2406 putative membrane protein - none -
fig|6666666.67505.peg.1929 CDS gi|171850984|emb|AM942444.1| 2254629 2254201 -3 - 429 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67505.peg.1930 CDS gi|171850984|emb|AM942444.1| 2255296 2254712 -1 - 585 FIG00544249: hypothetical protein - none -
fig|6666666.67505.peg.1931 CDS gi|171850984|emb|AM942444.1| 2255374 2256423 1 + 1050 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67505.peg.1932 CDS gi|171850984|emb|AM942444.1| 2256700 2256560 -1 - 141 hypothetical protein - none -
fig|6666666.67505.peg.1933 CDS gi|171850984|emb|AM942444.1| 2256728 2257705 2 + 978 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67505.peg.1934 CDS gi|171850984|emb|AM942444.1| 2258776 2259885 1 + 1110 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67505.peg.1935 CDS gi|171850984|emb|AM942444.1| 2261666 2259996 -2 - 1671 di- and tricarboxylate transporter - none -
fig|6666666.67505.peg.1936 CDS gi|171850984|emb|AM942444.1| 2262494 2261862 -2 - 633 hypothetical protein - none -
fig|6666666.67505.peg.1937 CDS gi|171850984|emb|AM942444.1| 2262498 2262833 3 + 336 hypothetical protein - none -
fig|6666666.67505.peg.1938 CDS gi|171850984|emb|AM942444.1| 2262912 2263310 3 + 399 hypothetical protein - none -
fig|6666666.67505.peg.1939 CDS gi|171850984|emb|AM942444.1| 2263456 2266161 1 + 2706 Phage infection protein - none -
fig|6666666.67505.peg.1940 CDS gi|171850984|emb|AM942444.1| 2266161 2268392 3 + 2232 hypothetical protein - none -
fig|6666666.67505.peg.1941 CDS gi|171850984|emb|AM942444.1| 2268806 2269819 2 + 1014 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67505.peg.1942 CDS gi|171850984|emb|AM942444.1| 2271361 2269970 -1 - 1392 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67505.peg.1943 CDS gi|171850984|emb|AM942444.1| 2271672 2272538 3 + 867 O-antigen export system permease protein RfbD - none -
fig|6666666.67505.peg.1944 CDS gi|171850984|emb|AM942444.1| 2272582 2273376 1 + 795 O-antigen export system, ATP-binding protein - none -
fig|6666666.67505.peg.1945 CDS gi|171850984|emb|AM942444.1| 2274706 2274476 -1 - 231 hypothetical protein - none -
fig|6666666.67505.peg.1946 CDS gi|171850984|emb|AM942444.1| 2274821 2276125 2 + 1305 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67505.peg.1947 CDS gi|171850984|emb|AM942444.1| 2276735 2276151 -2 - 585 FIG00544442: hypothetical protein - none -
fig|6666666.67505.peg.1948 CDS gi|171850984|emb|AM942444.1| 2277388 2276732 -1 - 657 FIG00544022: hypothetical protein - none -
fig|6666666.67505.peg.1949 CDS gi|171850984|emb|AM942444.1| 2278289 2277630 -2 - 660 FIG00549122: hypothetical protein - none -
fig|6666666.67505.peg.1950 CDS gi|171850984|emb|AM942444.1| 2279133 2278435 -3 - 699 hypothetical protein - none -
fig|6666666.67505.peg.1951 CDS gi|171850984|emb|AM942444.1| 2279219 2279524 2 + 306 FIG00543901: hypothetical protein - none -
fig|6666666.67505.peg.1952 CDS gi|171850984|emb|AM942444.1| 2279672 2280046 2 + 375 putative membrane protein - none -
fig|6666666.67505.peg.1953 CDS gi|171850984|emb|AM942444.1| 2280201 2281616 3 + 1416 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67505.peg.1954 CDS gi|171850984|emb|AM942444.1| 2281648 2282406 1 + 759 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67505.peg.1955 CDS gi|171850984|emb|AM942444.1| 2283502 2282597 -1 - 906 hypothetical protein - none -
fig|6666666.67505.peg.1956 CDS gi|171850984|emb|AM942444.1| 2284630 2283755 -1 - 876 hypothetical protein - none -
fig|6666666.67505.peg.1957 CDS gi|171850984|emb|AM942444.1| 2285068 2284931 -1 - 138 hypothetical protein - none -
fig|6666666.67505.peg.1958 CDS gi|171850984|emb|AM942444.1| 2285907 2286074 3 + 168 hypothetical protein - none -
fig|6666666.67505.peg.1959 CDS gi|171850984|emb|AM942444.1| 2287851 2286253 -3 - 1599 Mobile element protein - none -
fig|6666666.67505.peg.1960 CDS gi|171850984|emb|AM942444.1| 2287913 2288326 2 + 414 hypothetical protein - none -
fig|6666666.67505.peg.1961 CDS gi|171850984|emb|AM942444.1| 2288409 2290184 3 + 1776 hypothetical protein - none -
fig|6666666.67505.peg.1962 CDS gi|171850984|emb|AM942444.1| 2290236 2290745 3 + 510 hypothetical protein - none -
fig|6666666.67505.peg.1963 CDS gi|171850984|emb|AM942444.1| 2290789 2290926 1 + 138 hypothetical protein - none -
fig|6666666.67505.peg.1964 CDS gi|171850984|emb|AM942444.1| 2290971 2291777 3 + 807 hypothetical protein - none -
fig|6666666.67505.peg.1965 CDS gi|171850984|emb|AM942444.1| 2291844 2292140 3 + 297 hypothetical protein - none -
fig|6666666.67505.peg.1966 CDS gi|171850984|emb|AM942444.1| 2293781 2292843 -2 - 939 CRISPR-associated protein Cas1 CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67505.peg.1967 CDS gi|171850984|emb|AM942444.1| 2294356 2293784 -1 - 573 CRISPR-associated protein, Cse3 family CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67505.peg.1968 CDS gi|171850984|emb|AM942444.1| 2295171 2294485 -3 - 687 CRISPR-associated protein, Cas5e family CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67505.peg.1969 CDS gi|171850984|emb|AM942444.1| 2296337 2295207 -2 - 1131 CRISPR-associated protein, Cse4 family CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67505.peg.1970 CDS gi|171850984|emb|AM942444.1| 2296601 2296386 -2 - 216 hypothetical protein - none -
fig|6666666.67505.peg.1971 CDS gi|171850984|emb|AM942444.1| 2296686 2296976 3 + 291 hypothetical protein - none -
fig|6666666.67505.peg.1972 CDS gi|171850984|emb|AM942444.1| 2298747 2297065 -3 - 1683 CRISPR-associated protein, Cse1 family CRISPRs
fig|6666666.67505.peg.1973 CDS gi|171850984|emb|AM942444.1| 2301646 2298911 -1 - 2736 CRISPR-associated helicase Cas3, protein CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67505.peg.1974 CDS gi|171850984|emb|AM942444.1| 2302255 2303763 1 + 1509 sodium/glutamate symporter - none -
fig|6666666.67505.peg.1975 CDS gi|171850984|emb|AM942444.1| 2305494 2304040 -3 - 1455 FIG00546870: hypothetical protein - none -
fig|6666666.67505.peg.1976 CDS gi|171850984|emb|AM942444.1| 2306325 2305579 -3 - 747 FIG00546585: hypothetical protein - none -
fig|6666666.67505.peg.1977 CDS gi|171850984|emb|AM942444.1| 2306832 2306446 -3 - 387 Thioredoxin (EC 1.8.1.8) - none -
fig|6666666.67505.peg.1978 CDS gi|171850984|emb|AM942444.1| 2306937 2307497 3 + 561 FIG00548581: hypothetical protein - none -
fig|6666666.67505.peg.1979 CDS gi|171850984|emb|AM942444.1| 2308319 2307504 -2 - 816 ABC-type transporter, ATPase component - none -
fig|6666666.67505.peg.1980 CDS gi|171850984|emb|AM942444.1| 2308919 2308410 -2 - 510 CrcB protein - none -
fig|6666666.67505.peg.1981 CDS gi|171850984|emb|AM942444.1| 2309380 2308916 -1 - 465 CrcB protein - none -
fig|6666666.67505.peg.1982 CDS gi|171850984|emb|AM942444.1| 2310082 2309534 -1 - 549 Protein yceI precursor - none -
fig|6666666.67505.peg.1983 CDS gi|171850984|emb|AM942444.1| 2310366 2310872 3 + 507 Transcriptional regulator, MarR family - none -
fig|6666666.67505.peg.1984 CDS gi|171850984|emb|AM942444.1| 2312399 2310879 -2 - 1521 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67505.peg.1985 CDS gi|171850984|emb|AM942444.1| 2313670 2313212 -1 - 459 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67505.peg.1986 CDS gi|171850984|emb|AM942444.1| 2314383 2313766 -3 - 618 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67505.peg.1987 CDS gi|171850984|emb|AM942444.1| 2314754 2314467 -2 - 288 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.67505.peg.1988 CDS gi|171850984|emb|AM942444.1| 2315118 2314930 -3 - 189 FIG00544411: hypothetical protein - none -
fig|6666666.67505.peg.1989 CDS gi|171850984|emb|AM942444.1| 2316633 2315137 -3 - 1497 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1990 CDS gi|171850984|emb|AM942444.1| 2318853 2316634 -3 - 2220 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67505.peg.1991 CDS gi|171850984|emb|AM942444.1| 2319138 2320265 3 + 1128 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67505.peg.1992 CDS gi|171850984|emb|AM942444.1| 2320425 2320889 3 + 465 Transcriptional regulator, MarR family - none -
fig|6666666.67505.peg.1993 CDS gi|171850984|emb|AM942444.1| 2320926 2322152 3 + 1227 Universal stress protein family - none -
fig|6666666.67505.peg.1994 CDS gi|171850984|emb|AM942444.1| 2322355 2322831 1 + 477 hypothetical membrane protein - none -
fig|6666666.67505.peg.1995 CDS gi|171850984|emb|AM942444.1| 2325986 2322951 -2 - 3036 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67505.peg.1996 CDS gi|171850984|emb|AM942444.1| 2326027 2326659 1 + 633 FIG00546066: hypothetical protein - none -
fig|6666666.67505.peg.1997 CDS gi|171850984|emb|AM942444.1| 2328432 2327251 -3 - 1182 putative ABC transport system, permease protein - none -
fig|6666666.67505.peg.1998 CDS gi|171850984|emb|AM942444.1| 2329160 2328432 -2 - 729 ABC transporter, ATP-binding protein - none -
fig|6666666.67505.peg.1999 CDS gi|171850984|emb|AM942444.1| 2329773 2330813 3 + 1041 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67505.peg.2000 CDS gi|171850984|emb|AM942444.1| 2330955 2330842 -3 - 114 hypothetical protein - none -
fig|6666666.67505.peg.2001 CDS gi|171850984|emb|AM942444.1| 2331687 2331571 -3 - 117 hypothetical protein - none -
fig|6666666.67505.peg.2002 CDS gi|171850984|emb|AM942444.1| 2331797 2332876 2 + 1080 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67505.peg.2003 CDS gi|171850984|emb|AM942444.1| 2333574 2335079 3 + 1506 FIG00545175: hypothetical protein - none -
fig|6666666.67505.peg.2004 CDS gi|171850984|emb|AM942444.1| 2337292 2335760 -1 - 1533 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67505.peg.2005 CDS gi|171850984|emb|AM942444.1| 2337879 2337325 -3 - 555 hypothetical protein - none -
fig|6666666.67505.peg.2006 CDS gi|171850984|emb|AM942444.1| 2339511 2337898 -3 - 1614 hypothetical protein - none -
fig|6666666.67505.peg.2007 CDS gi|171850984|emb|AM942444.1| 2339637 2340665 3 + 1029 Sodium - Bile acid symporter - none -
fig|6666666.67505.peg.2008 CDS gi|171850984|emb|AM942444.1| 2341333 2340761 -1 - 573 hypothetical protein - none -
fig|6666666.67505.peg.2009 CDS gi|171850984|emb|AM942444.1| 2347682 2341596 -2 - 6087 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67505.peg.2010 CDS gi|171850984|emb|AM942444.1| 2349554 2347989 -2 - 1566 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67505.peg.2011 CDS gi|171850984|emb|AM942444.1| 2349667 2349551 -1 - 117 hypothetical protein - none -
fig|6666666.67505.peg.2012 CDS gi|171850984|emb|AM942444.1| 2349686 2350507 2 + 822 MutT/nudix family protein - none -
fig|6666666.67505.peg.2013 CDS gi|171850984|emb|AM942444.1| 2350517 2353396 2 + 2880 probable secreted protein. - none -
fig|6666666.67505.peg.2014 CDS gi|171850984|emb|AM942444.1| 2353484 2357965 2 + 4482 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67505.peg.2015 CDS gi|171850984|emb|AM942444.1| 2358083 2358745 2 + 663 putative RNA polymerase sigma factor - none -
fig|6666666.67505.peg.2016 CDS gi|171850984|emb|AM942444.1| 2358831 2359895 3 + 1065 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.67505.peg.2017 CDS gi|171850984|emb|AM942444.1| 2360024 2360347 2 + 324 Thioredoxin - none -
fig|6666666.67505.peg.2018 CDS gi|171850984|emb|AM942444.1| 2360404 2361630 1 + 1227 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.67505.peg.2019 CDS gi|171850984|emb|AM942444.1| 2362648 2361824 -1 - 825 FIG007808: hypothetical protein - none -
fig|6666666.67505.peg.2020 CDS gi|171850984|emb|AM942444.1| 2364309 2362873 -3 - 1437 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67505.peg.2021 CDS gi|171850984|emb|AM942444.1| 2365332 2364400 -3 - 933 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67505.peg.2022 CDS gi|171850984|emb|AM942444.1| 2366204 2365410 -2 - 795 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67505.peg.2023 CDS gi|171850984|emb|AM942444.1| 2367485 2366511 -2 - 975 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.67505.peg.2024 CDS gi|171850984|emb|AM942444.1| 2368308 2367925 -3 - 384 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.67505.peg.2025 CDS gi|171850984|emb|AM942444.1| 2368603 2368466 -1 - 138 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67505.rna.1 RNA gi|171850984|emb|AM942444.1| 16635 16708 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.67505.rna.2 RNA gi|171850984|emb|AM942444.1| 16737 16809 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67505.rna.3 RNA gi|171850984|emb|AM942444.1| 69332 69416 2 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.67505.rna.4 RNA gi|171850984|emb|AM942444.1| 131132 132638 2 + 1507 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67505.rna.5 RNA gi|171850984|emb|AM942444.1| 133008 136107 3 + 3100 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67505.rna.6 RNA gi|171850984|emb|AM942444.1| 136235 136355 2 + 121 5S RNA - none -
fig|6666666.67505.rna.7 RNA gi|171850984|emb|AM942444.1| 329803 329885 1 + 83 tRNA-Tyr-GTA - none -
fig|6666666.67505.rna.8 RNA gi|171850984|emb|AM942444.1| 339484 339556 1 + 73 tRNA-Thr-GGT - none -
fig|6666666.67505.rna.9 RNA gi|171850984|emb|AM942444.1| 339624 339697 3 + 74 tRNA-Met-CAT - none -
fig|6666666.67505.rna.10 RNA gi|171850984|emb|AM942444.1| 339983 340055 2 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.67505.rna.11 RNA gi|171850984|emb|AM942444.1| 623238 623311 3 + 74 tRNA-Met-CAT - none -
fig|6666666.67505.rna.12 RNA gi|171850984|emb|AM942444.1| 698893 698822 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.67505.rna.13 RNA gi|171850984|emb|AM942444.1| 710583 710656 3 + 74 tRNA-Leu-TAA - none -
fig|6666666.67505.rna.14 RNA gi|171850984|emb|AM942444.1| 829574 829502 -2 - 73 tRNA-Arg-CCG tRNAs
fig|6666666.67505.rna.15 RNA gi|171850984|emb|AM942444.1| 922240 922311 1 + 72 tRNA-Gln-CTG - none -
fig|6666666.67505.rna.16 RNA gi|171850984|emb|AM942444.1| 922351 922423 1 + 73 tRNA-Glu-CTC - none -
fig|6666666.67505.rna.17 RNA gi|171850984|emb|AM942444.1| 923921 923993 2 + 73 tRNA-Glu-CTC - none -
fig|6666666.67505.rna.18 RNA gi|171850984|emb|AM942444.1| 1097643 1097571 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67505.rna.19 RNA gi|171850984|emb|AM942444.1| 1097746 1097675 -1 - 72 tRNA-Val-GAC tRNAs
fig|6666666.67505.rna.20 RNA gi|171850984|emb|AM942444.1| 1097852 1097781 -2 - 72 tRNA-Cys-GCA tRNAs
fig|6666666.67505.rna.21 RNA gi|171850984|emb|AM942444.1| 1097981 1097909 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67505.rna.22 RNA gi|171850984|emb|AM942444.1| 1098084 1098013 -3 - 72 tRNA-Val-GAC tRNAs
fig|6666666.67505.rna.23 RNA gi|171850984|emb|AM942444.1| 1098178 1098106 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67505.rna.24 RNA gi|171850984|emb|AM942444.1| 1098495 1098566 3 + 72 tRNA-Val-CAC tRNAs
fig|6666666.67505.rna.25 RNA gi|171850984|emb|AM942444.1| 1216566 1216481 -3 - 86 tRNA-Leu-GAG tRNAs
fig|6666666.67505.rna.26 RNA gi|171850984|emb|AM942444.1| 1270334 1270407 2 + 74 tRNA-Pro-GGG tRNAs
fig|6666666.67505.rna.27 RNA gi|171850984|emb|AM942444.1| 1301197 1301077 -1 - 121 5S RNA - none -
fig|6666666.67505.rna.28 RNA gi|171850984|emb|AM942444.1| 1304427 1301329 -3 - 3099 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67505.rna.29 RNA gi|171850984|emb|AM942444.1| 1306300 1304794 -1 - 1507 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67505.rna.30 RNA gi|171850984|emb|AM942444.1| 1357213 1357286 1 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.67505.rna.31 RNA gi|171850984|emb|AM942444.1| 1539643 1539571 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.67505.rna.32 RNA gi|171850984|emb|AM942444.1| 1550161 1550090 -1 - 72 tRNA-Asn-GTT - none -
fig|6666666.67505.rna.33 RNA gi|171850984|emb|AM942444.1| 1551760 1551689 -1 - 72 tRNA-Asn-GTT - none -
fig|6666666.67505.rna.34 RNA gi|171850984|emb|AM942444.1| 1551879 1551952 3 + 74 tRNA-Met-CAT - none -
fig|6666666.67505.rna.35 RNA gi|171850984|emb|AM942444.1| 1634004 1633931 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.67505.rna.36 RNA gi|171850984|emb|AM942444.1| 1634197 1634126 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.67505.rna.37 RNA gi|171850984|emb|AM942444.1| 1646150 1646223 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.67505.rna.38 RNA gi|171850984|emb|AM942444.1| 1648083 1648155 3 + 73 tRNA-His-GTG - none -
fig|6666666.67505.rna.39 RNA gi|171850984|emb|AM942444.1| 1652914 1652987 1 + 74 tRNA-Lys-CTT - none -
fig|6666666.67505.rna.40 RNA gi|171850984|emb|AM942444.1| 1698473 1698554 2 + 82 tRNA-Leu-TAG - none -
fig|6666666.67505.rna.41 RNA gi|171850984|emb|AM942444.1| 1743982 1743910 -1 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.67505.rna.42 RNA gi|171850984|emb|AM942444.1| 1783149 1783221 3 + 73 tRNA-Arg-CCT - none -
fig|6666666.67505.rna.43 RNA gi|171850984|emb|AM942444.1| 1849725 1849605 -3 - 121 5S RNA - none -
fig|6666666.67505.rna.44 RNA gi|171850984|emb|AM942444.1| 1852947 1849849 -3 - 3099 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67505.rna.45 RNA gi|171850984|emb|AM942444.1| 1854823 1853317 -1 - 1507 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67505.rna.46 RNA gi|171850984|emb|AM942444.1| 1867850 1867778 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.67505.rna.47 RNA gi|171850984|emb|AM942444.1| 1867945 1867872 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.67505.rna.48 RNA gi|171850984|emb|AM942444.1| 1870333 1870260 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.67505.rna.49 RNA gi|171850984|emb|AM942444.1| 1870407 1870335 -3 - 73 tRNA-Glu-TTC - none -
fig|6666666.67505.rna.50 RNA gi|171850984|emb|AM942444.1| 1872017 1871945 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.67505.rna.51 RNA gi|171850984|emb|AM942444.1| 1925323 1925251 -1 - 73 tRNA-Thr-TGT - none -
fig|6666666.67505.rna.52 RNA gi|171850984|emb|AM942444.1| 2130607 2130677 1 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.67505.rna.53 RNA gi|171850984|emb|AM942444.1| 2145403 2145331 -1 - 73 tRNA-Thr-CGT - none -
fig|6666666.67505.rna.54 RNA gi|171850984|emb|AM942444.1| 2175703 2175776 1 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.67505.rna.55 RNA gi|171850984|emb|AM942444.1| 2244267 2244182 -3 - 86 tRNA-Ser-GGA tRNAs
fig|6666666.67505.rna.56 RNA gi|171850984|emb|AM942444.1| 2254077 2253993 -3 - 85 tRNA-Ser-CGA tRNAs
fig|6666666.67505.rna.57 RNA gi|171850984|emb|AM942444.1| 2256569 2256497 -2 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67505.rna.58 RNA gi|171850984|emb|AM942444.1| 2258397 2258325 -3 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67505.rna.59 RNA gi|171850984|emb|AM942444.1| 2258658 2258571 -3 - 88 tRNA-Ser-GCT - none -
fig|6666666.67505.rna.60 RNA gi|171850984|emb|AM942444.1| 2268485 2268569 2 + 85 tRNA-Ser-TGA - none -