fig|6666666.67506.peg.1 CDS gi|448276180|gb|CP004085.1| 52 1761 1 + 1710 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67506.peg.2 CDS gi|448276180|gb|CP004085.1| 2605 3789 1 + 1185 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67506.peg.3 CDS gi|448276180|gb|CP004085.1| 3823 5241 1 + 1419 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67506.peg.4 CDS gi|448276180|gb|CP004085.1| 5386 5895 1 + 510 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67506.peg.5 CDS gi|448276180|gb|CP004085.1| 6008 8080 2 + 2073 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67506.peg.6 CDS gi|448276180|gb|CP004085.1| 8391 9404 3 + 1014 FIG00544157: hypothetical protein - none -
fig|6666666.67506.peg.7 CDS gi|448276180|gb|CP004085.1| 10385 9519 -2 - 867 hypothetical protein - none -
fig|6666666.67506.peg.8 CDS gi|448276180|gb|CP004085.1| 11892 10522 -3 - 1371 glycoside hydrolase family 1 - none -
fig|6666666.67506.peg.9 CDS gi|448276180|gb|CP004085.1| 13312 11954 -1 - 1359 major facilitator superfamily MFS_1 - none -
fig|6666666.67506.peg.10 CDS gi|448276180|gb|CP004085.1| 13437 15953 3 + 2517 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67506.peg.11 CDS gi|448276180|gb|CP004085.1| 15950 16534 2 + 585 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67506.peg.12 CDS gi|448276180|gb|CP004085.1| 19638 18634 -3 - 1005 hypothetical protein - none -
fig|6666666.67506.peg.13 CDS gi|448276180|gb|CP004085.1| 20093 19635 -2 - 459 hypothetical protein - none -
fig|6666666.67506.peg.14 CDS gi|448276180|gb|CP004085.1| 20785 20654 -1 - 132 hypothetical protein - none -
fig|6666666.67506.peg.15 CDS gi|448276180|gb|CP004085.1| 22944 21121 -3 - 1824 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67506.peg.16 CDS gi|448276180|gb|CP004085.1| 23489 23007 -2 - 483 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67506.peg.17 CDS gi|448276180|gb|CP004085.1| 24784 23906 -1 - 879 hypothetical protein - none -
fig|6666666.67506.peg.18 CDS gi|448276180|gb|CP004085.1| 25633 25061 -1 - 573 Transcriptional regulator, TetR family - none -
fig|6666666.67506.peg.19 CDS gi|448276180|gb|CP004085.1| 27150 25651 -3 - 1500 major facilitator superfamily MFS_1 - none -
fig|6666666.67506.peg.20 CDS gi|448276180|gb|CP004085.1| 27429 27968 3 + 540 putative resolvase - none -
fig|6666666.67506.peg.21 CDS gi|448276180|gb|CP004085.1| 30182 28929 -2 - 1254 hypothetical protein - none -
fig|6666666.67506.peg.22 CDS gi|448276180|gb|CP004085.1| 32373 30472 -3 - 1902 hypothetical protein - none -
fig|6666666.67506.peg.23 CDS gi|448276180|gb|CP004085.1| 32598 33494 3 + 897 probable 5-valerolactone hydrolase - none -
fig|6666666.67506.peg.24 CDS gi|448276180|gb|CP004085.1| 33497 34300 2 + 804 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67506.peg.25 CDS gi|448276180|gb|CP004085.1| 34586 34924 2 + 339 FIG00545313: hypothetical protein - none -
fig|6666666.67506.peg.26 CDS gi|448276180|gb|CP004085.1| 35434 36285 1 + 852 hypothetical protein - none -
fig|6666666.67506.peg.27 CDS gi|448276180|gb|CP004085.1| 36410 37759 2 + 1350 Cyanate MFS transporter - none -
fig|6666666.67506.peg.28 CDS gi|448276180|gb|CP004085.1| 38216 37785 -2 - 432 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.67506.peg.29 CDS gi|448276180|gb|CP004085.1| 38529 38401 -3 - 129 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.67506.peg.30 CDS gi|448276180|gb|CP004085.1| 38853 39947 3 + 1095 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67506.peg.31 CDS gi|448276180|gb|CP004085.1| 40001 40363 2 + 363 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67506.peg.32 CDS gi|448276180|gb|CP004085.1| 40818 40934 3 + 117 hypothetical protein - none -
fig|6666666.67506.peg.33 CDS gi|448276180|gb|CP004085.1| 41158 42621 1 + 1464 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67506.peg.34 CDS gi|448276180|gb|CP004085.1| 42908 43441 2 + 534 hypothetical protein - none -
fig|6666666.67506.peg.35 CDS gi|448276180|gb|CP004085.1| 44665 44507 -1 - 159 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.36 CDS gi|448276180|gb|CP004085.1| 46326 45832 -3 - 495 hypothetical protein - none -
fig|6666666.67506.peg.37 CDS gi|448276180|gb|CP004085.1| 48093 47389 -3 - 705 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.38 CDS gi|448276180|gb|CP004085.1| 48745 48263 -1 - 483 hypothetical protein - none -
fig|6666666.67506.peg.39 CDS gi|448276180|gb|CP004085.1| 49310 48798 -2 - 513 permease of the major facilitator superfamily - none -
fig|6666666.67506.peg.40 CDS gi|448276180|gb|CP004085.1| 50119 49265 -1 - 855 permease of the major facilitator superfamily - none -
fig|6666666.67506.peg.41 CDS gi|448276180|gb|CP004085.1| 50239 51369 1 + 1131 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Serine-glyoxylate cycle
fig|6666666.67506.peg.42 CDS gi|448276180|gb|CP004085.1| 51486 51833 3 + 348 putative mercury resistance operon regulator MerR - none -
fig|6666666.67506.peg.43 CDS gi|448276180|gb|CP004085.1| 53983 51896 -1 - 2088 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67506.peg.44 CDS gi|448276180|gb|CP004085.1| 55689 53992 -3 - 1698 FIG00546978: hypothetical protein - none -
fig|6666666.67506.peg.45 CDS gi|448276180|gb|CP004085.1| 55873 56397 1 + 525 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.46 CDS gi|448276180|gb|CP004085.1| 56405 57097 2 + 693 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.67506.peg.47 CDS gi|448276180|gb|CP004085.1| 57420 57142 -3 - 279 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67506.peg.48 CDS gi|448276180|gb|CP004085.1| 57565 58251 1 + 687 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67506.peg.49 CDS gi|448276180|gb|CP004085.1| 60459 58282 -3 - 2178 Serine/threonine-protein kinase PknB (EC 2.7.11.1) - none -
fig|6666666.67506.peg.50 CDS gi|448276180|gb|CP004085.1| 62280 60637 -3 - 1644 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67506.peg.51 CDS gi|448276180|gb|CP004085.1| 63731 62283 -2 - 1449 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.52 CDS gi|448276180|gb|CP004085.1| 65113 63728 -1 - 1386 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67506.peg.53 CDS gi|448276180|gb|CP004085.1| 66683 65115 -2 - 1569 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67506.peg.54 CDS gi|448276180|gb|CP004085.1| 67195 66680 -1 - 516 FIG00818182: hypothetical protein - none -
fig|6666666.67506.peg.55 CDS gi|448276180|gb|CP004085.1| 68612 67380 -2 - 1233 FIG00543872: hypothetical protein - none -
fig|6666666.67506.peg.56 CDS gi|448276180|gb|CP004085.1| 69133 69750 1 + 618 putative acetyltransferase - none -
fig|6666666.67506.peg.57 CDS gi|448276180|gb|CP004085.1| 71463 69793 -3 - 1671 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67506.peg.58 CDS gi|448276180|gb|CP004085.1| 73145 71460 -2 - 1686 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67506.peg.59 CDS gi|448276180|gb|CP004085.1| 74149 73184 -1 - 966 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67506.peg.60 CDS gi|448276180|gb|CP004085.1| 75861 74146 -3 - 1716 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67506.peg.61 CDS gi|448276180|gb|CP004085.1| 76097 76660 2 + 564 hypothetical protein - none -
fig|6666666.67506.peg.62 CDS gi|448276180|gb|CP004085.1| 77599 76799 -1 - 801 FIG00547049: hypothetical protein - none -
fig|6666666.67506.peg.63 CDS gi|448276180|gb|CP004085.1| 77724 78938 3 + 1215 hypothetical protein - none -
fig|6666666.67506.peg.64 CDS gi|448276180|gb|CP004085.1| 79153 80019 1 + 867 hypothetical protein - none -
fig|6666666.67506.peg.65 CDS gi|448276180|gb|CP004085.1| 81134 80142 -2 - 993 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67506.peg.66 CDS gi|448276180|gb|CP004085.1| 81307 81951 1 + 645 probable integral membrane protein - none -
fig|6666666.67506.peg.67 CDS gi|448276180|gb|CP004085.1| 82154 82864 2 + 711 hypothetical protein - none -
fig|6666666.67506.peg.68 CDS gi|448276180|gb|CP004085.1| 82953 82825 -3 - 129 hypothetical protein - none -
fig|6666666.67506.peg.69 CDS gi|448276180|gb|CP004085.1| 82960 84231 1 + 1272 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67506.peg.70 CDS gi|448276180|gb|CP004085.1| 84231 85856 3 + 1626 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67506.peg.71 CDS gi|448276180|gb|CP004085.1| 85915 86814 1 + 900 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67506.peg.72 CDS gi|448276180|gb|CP004085.1| 86814 87971 3 + 1158 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.73 CDS gi|448276180|gb|CP004085.1| 88047 89390 3 + 1344 putative transport protein - none -
fig|6666666.67506.peg.74 CDS gi|448276180|gb|CP004085.1| 89445 90194 3 + 750 Short chain dehydrogenase - none -
fig|6666666.67506.peg.75 CDS gi|448276180|gb|CP004085.1| 90367 91650 1 + 1284 hypothetical protein - none -
fig|6666666.67506.peg.76 CDS gi|448276180|gb|CP004085.1| 91781 92581 2 + 801 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67506.peg.77 CDS gi|448276180|gb|CP004085.1| 93736 92741 -1 - 996 hypothetical protein - none -
fig|6666666.67506.peg.78 CDS gi|448276180|gb|CP004085.1| 94524 93943 -3 - 582 hypothetical protein - none -
fig|6666666.67506.peg.79 CDS gi|448276180|gb|CP004085.1| 94682 95080 2 + 399 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67506.peg.80 CDS gi|448276180|gb|CP004085.1| 95077 97986 1 + 2910 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.67506.peg.81 CDS gi|448276180|gb|CP004085.1| 100569 98092 -3 - 2478 FIG00548606: hypothetical protein - none -
fig|6666666.67506.peg.82 CDS gi|448276180|gb|CP004085.1| 101313 100747 -3 - 567 carbonic anhydrase, family 3 - none -
fig|6666666.67506.peg.83 CDS gi|448276180|gb|CP004085.1| 101354 101845 2 + 492 multimeric flavodoxin WrbA - none -
fig|6666666.67506.peg.84 CDS gi|448276180|gb|CP004085.1| 102173 101859 -2 - 315 Conserved putative integral membrane protein - none -
fig|6666666.67506.peg.85 CDS gi|448276180|gb|CP004085.1| 102247 102708 1 + 462 FIG00544629: hypothetical protein - none -
fig|6666666.67506.peg.86 CDS gi|448276180|gb|CP004085.1| 102772 103059 1 + 288 transglycosylase associated protein - none -
fig|6666666.67506.peg.87 CDS gi|448276180|gb|CP004085.1| 103867 103121 -1 - 747 putative two-component system response regulator - none -
fig|6666666.67506.peg.88 CDS gi|448276180|gb|CP004085.1| 105195 103867 -3 - 1329 two-component system sensor kinase - none -
fig|6666666.67506.peg.89 CDS gi|448276180|gb|CP004085.1| 105460 106125 1 + 666 hypothetical protein - none -
fig|6666666.67506.peg.90 CDS gi|448276180|gb|CP004085.1| 108721 106190 -1 - 2532 ATP-dependent helicase HrpB - none -
fig|6666666.67506.peg.91 CDS gi|448276180|gb|CP004085.1| 108713 108919 2 + 207 hypothetical protein - none -
fig|6666666.67506.peg.92 CDS gi|448276180|gb|CP004085.1| 109272 108916 -3 - 357 hypothetical protein - none -
fig|6666666.67506.peg.93 CDS gi|448276180|gb|CP004085.1| 109652 110338 2 + 687 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67506.peg.94 CDS gi|448276180|gb|CP004085.1| 112593 110341 -3 - 2253 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.67506.peg.95 CDS gi|448276180|gb|CP004085.1| 112694 113047 2 + 354 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67506.peg.96 CDS gi|448276180|gb|CP004085.1| 113047 113880 1 + 834 FIG00543993: hypothetical protein - none -
fig|6666666.67506.peg.97 CDS gi|448276180|gb|CP004085.1| 115926 113890 -3 - 2037 putative endopeptidase - none -
fig|6666666.67506.peg.98 CDS gi|448276180|gb|CP004085.1| 116097 116795 3 + 699 hypothetical protein - none -
fig|6666666.67506.peg.99 CDS gi|448276180|gb|CP004085.1| 116861 117766 2 + 906 FIG00547725: hypothetical protein - none -
fig|6666666.67506.peg.100 CDS gi|448276180|gb|CP004085.1| 117985 119238 1 + 1254 putative lysozyme precursor - none -
fig|6666666.67506.peg.101 CDS gi|448276180|gb|CP004085.1| 119532 119404 -3 - 129 putative arabinosyltransferase - none -
fig|6666666.67506.peg.102 CDS gi|448276180|gb|CP004085.1| 120142 120020 -1 - 123 hypothetical protein - none -
fig|6666666.67506.peg.103 CDS gi|448276180|gb|CP004085.1| 121640 120159 -2 - 1482 Multicopper oxidase Copper homeostasis
fig|6666666.67506.peg.104 CDS gi|448276180|gb|CP004085.1| 122286 121711 -3 - 576 putative exported protein - none -
fig|6666666.67506.peg.105 CDS gi|448276180|gb|CP004085.1| 122691 123413 3 + 723 two-component system, response regulator - none -
fig|6666666.67506.peg.106 CDS gi|448276180|gb|CP004085.1| 123750 124538 3 + 789 two-component system, sensory transduction histidine kinase - none -
fig|6666666.67506.peg.107 CDS gi|448276180|gb|CP004085.1| 124738 124616 -1 - 123 hypothetical protein - none -
fig|6666666.67506.peg.108 CDS gi|448276180|gb|CP004085.1| 124824 124976 3 + 153 Cation transport ATPase - none -
fig|6666666.67506.peg.109 CDS gi|448276180|gb|CP004085.1| 125228 124983 -2 - 246 FIG01257340: hypothetical protein - none -
fig|6666666.67506.peg.110 CDS gi|448276180|gb|CP004085.1| 125238 127262 3 + 2025 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67506.peg.111 CDS gi|448276180|gb|CP004085.1| 131304 127723 -3 - 3582 putative arabinosyltransferase - none -
fig|6666666.67506.peg.112 CDS gi|448276180|gb|CP004085.1| 133416 131416 -3 - 2001 putative membrane protein - none -
fig|6666666.67506.peg.113 CDS gi|448276180|gb|CP004085.1| 134916 133453 -3 - 1464 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67506.peg.114 CDS gi|448276180|gb|CP004085.1| 135164 135538 2 + 375 Transcriptional regulator, GntR family - none -
fig|6666666.67506.peg.115 CDS gi|448276180|gb|CP004085.1| 135706 135912 1 + 207 putative ABC transport system, ATP-binding protein - none -
fig|6666666.67506.peg.116 CDS gi|448276180|gb|CP004085.1| 135934 136677 1 + 744 putative ABC transport system, ATP-binding protein - none -
fig|6666666.67506.peg.117 CDS gi|448276180|gb|CP004085.1| 136670 138055 2 + 1386 hypothetical protein - none -
fig|6666666.67506.peg.118 CDS gi|448276180|gb|CP004085.1| 144373 145908 1 + 1536 putative permease of the major facilitator superfamily - none -
fig|6666666.67506.peg.119 CDS gi|448276180|gb|CP004085.1| 147111 145990 -3 - 1122 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.120 CDS gi|448276180|gb|CP004085.1| 147151 147291 1 + 141 FIG00544217: hypothetical protein - none -
fig|6666666.67506.peg.121 CDS gi|448276180|gb|CP004085.1| 147432 148340 3 + 909 Universal stress protein family - none -
fig|6666666.67506.peg.122 CDS gi|448276180|gb|CP004085.1| 148432 149109 1 + 678 Transcriptional regulator, TetR family - none -
fig|6666666.67506.peg.123 CDS gi|448276180|gb|CP004085.1| 150139 149192 -1 - 948 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67506.peg.124 CDS gi|448276180|gb|CP004085.1| 150165 150959 3 + 795 FIG054872: Sortase-like protein - none -
fig|6666666.67506.peg.125 CDS gi|448276180|gb|CP004085.1| 150963 151118 3 + 156 FIG060545: short hypothetical protein - none -
fig|6666666.67506.peg.126 CDS gi|448276180|gb|CP004085.1| 151746 151198 -3 - 549 FIG00544353: hypothetical protein - none -
fig|6666666.67506.peg.127 CDS gi|448276180|gb|CP004085.1| 152213 151875 -2 - 339 FIG00545047: hypothetical protein - none -
fig|6666666.67506.peg.128 CDS gi|448276180|gb|CP004085.1| 152969 152346 -2 - 624 FIG071084: hypothetical protein - none -
fig|6666666.67506.peg.129 CDS gi|448276180|gb|CP004085.1| 153195 154826 3 + 1632 FIG00544355: hypothetical protein - none -
fig|6666666.67506.peg.130 CDS gi|448276180|gb|CP004085.1| 154867 155562 1 + 696 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67506.peg.131 CDS gi|448276180|gb|CP004085.1| 156305 155703 -2 - 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67506.peg.132 CDS gi|448276180|gb|CP004085.1| 157434 156481 -3 - 954 hypothetical protein - none -
fig|6666666.67506.peg.133 CDS gi|448276180|gb|CP004085.1| 157545 158318 3 + 774 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67506.peg.134 CDS gi|448276180|gb|CP004085.1| 158369 159286 2 + 918 FIG00996178: hypothetical protein - none -
fig|6666666.67506.peg.135 CDS gi|448276180|gb|CP004085.1| 160273 159392 -1 - 882 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67506.peg.136 CDS gi|448276180|gb|CP004085.1| 161646 161071 -3 - 576 FMN reductase, NADPH-dependent - none -
fig|6666666.67506.peg.137 CDS gi|448276180|gb|CP004085.1| 162744 161740 -3 - 1005 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67506.peg.138 CDS gi|448276180|gb|CP004085.1| 163265 162810 -2 - 456 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67506.peg.139 CDS gi|448276180|gb|CP004085.1| 163471 163743 1 + 273 hypothetical protein - none -
fig|6666666.67506.peg.140 CDS gi|448276180|gb|CP004085.1| 164542 163760 -1 - 783 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67506.peg.141 CDS gi|448276180|gb|CP004085.1| 165355 164573 -1 - 783 Putative conserved integral membrane protein - none -
fig|6666666.67506.peg.142 CDS gi|448276180|gb|CP004085.1| 166734 165352 -3 - 1383 putative amidase - none -
fig|6666666.67506.peg.143 CDS gi|448276180|gb|CP004085.1| 166797 167846 3 + 1050 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67506.peg.144 CDS gi|448276180|gb|CP004085.1| 167864 168682 2 + 819 putative phosphoglycerate mutase - none -
fig|6666666.67506.peg.145 CDS gi|448276180|gb|CP004085.1| 169048 168698 -1 - 351 FIG00544953: hypothetical protein - none -
fig|6666666.67506.peg.146 CDS gi|448276180|gb|CP004085.1| 170119 169079 -1 - 1041 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67506.peg.147 CDS gi|448276180|gb|CP004085.1| 170190 171458 3 + 1269 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67506.peg.148 CDS gi|448276180|gb|CP004085.1| 171595 172503 1 + 909 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.149 CDS gi|448276180|gb|CP004085.1| 172503 173414 3 + 912 Hydrolase (HAD superfamily) - none -
fig|6666666.67506.peg.150 CDS gi|448276180|gb|CP004085.1| 173580 175109 3 + 1530 FAD/FMN-containing dehydrogenases - none -
fig|6666666.67506.peg.151 CDS gi|448276180|gb|CP004085.1| 175252 176568 1 + 1317 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67506.peg.152 CDS gi|448276180|gb|CP004085.1| 176618 177823 2 + 1206 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67506.peg.153 CDS gi|448276180|gb|CP004085.1| 181068 177892 -3 - 3177 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.154 CDS gi|448276180|gb|CP004085.1| 182240 181071 -2 - 1170 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.155 CDS gi|448276180|gb|CP004085.1| 183835 182243 -1 - 1593 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.156 CDS gi|448276180|gb|CP004085.1| 184594 184034 -1 - 561 Transcriptional regulator, TetR family - none -
fig|6666666.67506.peg.157 CDS gi|448276180|gb|CP004085.1| 185290 184616 -1 - 675 putative ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.158 CDS gi|448276180|gb|CP004085.1| 186435 185287 -3 - 1149 putative ABC transport system, permease protein - none -
fig|6666666.67506.peg.159 CDS gi|448276180|gb|CP004085.1| 186793 187656 1 + 864 Putative secreted hydrolase - none -
fig|6666666.67506.peg.160 CDS gi|448276180|gb|CP004085.1| 187876 189960 1 + 2085 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67506.peg.161 CDS gi|448276180|gb|CP004085.1| 189960 190553 3 + 594 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67506.peg.162 CDS gi|448276180|gb|CP004085.1| 190599 191651 3 + 1053 putative membrane protein - none -
fig|6666666.67506.peg.163 CDS gi|448276180|gb|CP004085.1| 191760 192266 3 + 507 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67506.peg.164 CDS gi|448276180|gb|CP004085.1| 192286 192777 1 + 492 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67506.peg.165 CDS gi|448276180|gb|CP004085.1| 193106 195046 2 + 1941 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67506.peg.166 CDS gi|448276180|gb|CP004085.1| 195255 195836 3 + 582 FIG00544389: hypothetical protein - none -
fig|6666666.67506.peg.167 CDS gi|448276180|gb|CP004085.1| 195862 196812 1 + 951 hypothetical protein Rv3802c - none -
fig|6666666.67506.peg.168 CDS gi|448276180|gb|CP004085.1| 196915 198792 1 + 1878 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.169 CDS gi|448276180|gb|CP004085.1| 198871 203877 1 + 5007 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67506.peg.170 CDS gi|448276180|gb|CP004085.1| 203885 205486 2 + 1602 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67506.peg.171 CDS gi|448276180|gb|CP004085.1| 205611 207338 3 + 1728 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.172 CDS gi|448276180|gb|CP004085.1| 208688 207411 -2 - 1278 FIG00545475: hypothetical protein - none -
fig|6666666.67506.peg.173 CDS gi|448276180|gb|CP004085.1| 210129 208705 -3 - 1425 hypothetical protein - none -
fig|6666666.67506.peg.174 CDS gi|448276180|gb|CP004085.1| 210616 210113 -1 - 504 putative cholesterol esterase - none -
fig|6666666.67506.peg.175 CDS gi|448276180|gb|CP004085.1| 211186 210770 -1 - 417 FIG00544939: hypothetical protein - none -
fig|6666666.67506.peg.176 CDS gi|448276180|gb|CP004085.1| 212269 211196 -1 - 1074 Possible membrane protein - none -
fig|6666666.67506.peg.177 CDS gi|448276180|gb|CP004085.1| 214929 212269 -3 - 2661 putative integral membrane protein - none -
fig|6666666.67506.peg.178 CDS gi|448276180|gb|CP004085.1| 215668 214922 -1 - 747 FIG00546304: hypothetical protein - none -
fig|6666666.67506.peg.179 CDS gi|448276180|gb|CP004085.1| 216664 215807 -1 - 858 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67506.peg.180 CDS gi|448276180|gb|CP004085.1| 216771 217625 3 + 855 FIG00546850: hypothetical protein - none -
fig|6666666.67506.peg.181 CDS gi|448276180|gb|CP004085.1| 217629 218009 3 + 381 hypothetical protein - none -
fig|6666666.67506.peg.182 CDS gi|448276180|gb|CP004085.1| 218236 220059 1 + 1824 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67506.peg.183 CDS gi|448276180|gb|CP004085.1| 221882 220314 -2 - 1569 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.67506.peg.184 CDS gi|448276180|gb|CP004085.1| 222635 222072 -2 - 564 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.67506.peg.185 CDS gi|448276180|gb|CP004085.1| 223654 225135 1 + 1482 FIG00545619: hypothetical protein - none -
fig|6666666.67506.peg.186 CDS gi|448276180|gb|CP004085.1| 225275 227260 2 + 1986 FIG00548828: hypothetical protein - none -
fig|6666666.67506.peg.187 CDS gi|448276180|gb|CP004085.1| 229843 227573 -1 - 2271 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.188 CDS gi|448276180|gb|CP004085.1| 231161 229932 -2 - 1230 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67506.peg.189 CDS gi|448276180|gb|CP004085.1| 232196 231291 -2 - 906 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67506.peg.190 CDS gi|448276180|gb|CP004085.1| 232220 233383 2 + 1164 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67506.peg.191 CDS gi|448276180|gb|CP004085.1| 235173 233380 -3 - 1794 FIG00547077: hypothetical protein - none -
fig|6666666.67506.peg.192 CDS gi|448276180|gb|CP004085.1| 236460 235255 -3 - 1206 FIG00547617: hypothetical protein - none -
fig|6666666.67506.peg.193 CDS gi|448276180|gb|CP004085.1| 236988 236632 -3 - 357 hypothetical protein - none -
fig|6666666.67506.peg.194 CDS gi|448276180|gb|CP004085.1| 241749 237916 -3 - 3834 Conserved putative integral membrane protein - none -
fig|6666666.67506.peg.195 CDS gi|448276180|gb|CP004085.1| 242008 241799 -1 - 210 FIG00543976: hypothetical protein - none -
fig|6666666.67506.peg.196 CDS gi|448276180|gb|CP004085.1| 242667 242107 -3 - 561 FIG00545938: hypothetical protein - none -
fig|6666666.67506.peg.197 CDS gi|448276180|gb|CP004085.1| 242898 243950 3 + 1053 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.67506.peg.198 CDS gi|448276180|gb|CP004085.1| 244127 245857 2 + 1731 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67506.peg.199 CDS gi|448276180|gb|CP004085.1| 246431 245943 -2 - 489 hypothetical protein - none -
fig|6666666.67506.peg.200 CDS gi|448276180|gb|CP004085.1| 247901 246609 -2 - 1293 Isocitrate lyase (EC 4.1.3.1) Glyoxylate bypass;
Glyoxylate bypass cluster;
Serine-glyoxylate cycle
fig|6666666.67506.peg.201 CDS gi|448276180|gb|CP004085.1| 248369 249946 2 + 1578 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67506.peg.202 CDS gi|448276180|gb|CP004085.1| 250002 250187 3 + 186 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67506.peg.203 CDS gi|448276180|gb|CP004085.1| 250210 250572 1 + 363 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67506.peg.204 CDS gi|448276180|gb|CP004085.1| 253163 255361 2 + 2199 Malate synthase G (EC 2.3.3.9) Glyoxylate bypass;
Glyoxylate bypass cluster
fig|6666666.67506.peg.205 CDS gi|448276180|gb|CP004085.1| 255596 256414 2 + 819 Beta-phosphoglucomutase (EC 5.4.2.6) Trehalose Uptake and Utilization
fig|6666666.67506.peg.206 CDS gi|448276180|gb|CP004085.1| 256577 259150 2 + 2574 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Trehalose Biosynthesis;
Trehalose Uptake and Utilization
fig|6666666.67506.peg.207 CDS gi|448276180|gb|CP004085.1| 259387 260172 1 + 786 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67506.peg.208 CDS gi|448276180|gb|CP004085.1| 260203 262236 1 + 2034 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67506.peg.209 CDS gi|448276180|gb|CP004085.1| 262236 262985 3 + 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67506.peg.210 CDS gi|448276180|gb|CP004085.1| 263031 263345 3 + 315 FIG01282797: hypothetical protein - none -
fig|6666666.67506.peg.211 CDS gi|448276180|gb|CP004085.1| 263566 264891 1 + 1326 FIG00544632: hypothetical protein - none -
fig|6666666.67506.peg.212 CDS gi|448276180|gb|CP004085.1| 264953 265273 2 + 321 FIG00544701: hypothetical protein - none -
fig|6666666.67506.peg.213 CDS gi|448276180|gb|CP004085.1| 265339 265986 1 + 648 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67506.peg.214 CDS gi|448276180|gb|CP004085.1| 266992 266003 -1 - 990 FIG00544979: hypothetical protein - none -
fig|6666666.67506.peg.215 CDS gi|448276180|gb|CP004085.1| 267959 267120 -2 - 840 Uncharacterized protein SCO4203 - none -
fig|6666666.67506.peg.216 CDS gi|448276180|gb|CP004085.1| 268466 267966 -2 - 501 FIG00546961: hypothetical protein - none -
fig|6666666.67506.peg.217 CDS gi|448276180|gb|CP004085.1| 268490 269737 2 + 1248 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67506.peg.218 CDS gi|448276180|gb|CP004085.1| 271677 269896 -3 - 1782 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.219 CDS gi|448276180|gb|CP004085.1| 271851 273125 3 + 1275 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67506.peg.220 CDS gi|448276180|gb|CP004085.1| 273170 273769 2 + 600 Uncharacterized protein Rv0487/MT0505 clustered with mycothiol biosynthesis gene Glutathione analogs: mycothiol
fig|6666666.67506.peg.221 CDS gi|448276180|gb|CP004085.1| 273860 274612 2 + 753 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67506.peg.222 CDS gi|448276180|gb|CP004085.1| 275657 274746 -2 - 912 FIG00543972: hypothetical protein - none -
fig|6666666.67506.peg.223 CDS gi|448276180|gb|CP004085.1| 275870 276703 2 + 834 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67506.peg.224 CDS gi|448276180|gb|CP004085.1| 276813 278072 3 + 1260 FIG01276758: hypothetical protein - none -
fig|6666666.67506.peg.225 CDS gi|448276180|gb|CP004085.1| 278247 279083 3 + 837 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67506.peg.226 CDS gi|448276180|gb|CP004085.1| 279475 279681 1 + 207 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67506.peg.227 CDS gi|448276180|gb|CP004085.1| 279937 279818 -1 - 120 hypothetical protein - none -
fig|6666666.67506.peg.228 CDS gi|448276180|gb|CP004085.1| 281230 280262 -1 - 969 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67506.peg.229 CDS gi|448276180|gb|CP004085.1| 281255 281506 2 + 252 Glutaredoxin-like domain protein - none -
fig|6666666.67506.peg.230 CDS gi|448276180|gb|CP004085.1| 281810 283294 2 + 1485 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.231 CDS gi|448276180|gb|CP004085.1| 283284 284234 3 + 951 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.232 CDS gi|448276180|gb|CP004085.1| 284340 286109 3 + 1770 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.233 CDS gi|448276180|gb|CP004085.1| 286315 288960 1 + 2646 FIG00437212: hypothetical protein - none -
fig|6666666.67506.peg.234 CDS gi|448276180|gb|CP004085.1| 288966 289508 3 + 543 hypothetical protein - none -
fig|6666666.67506.peg.235 CDS gi|448276180|gb|CP004085.1| 289636 290661 1 + 1026 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.236 CDS gi|448276180|gb|CP004085.1| 290834 290622 -2 - 213 hypothetical protein - none -
fig|6666666.67506.peg.237 CDS gi|448276180|gb|CP004085.1| 290961 291656 3 + 696 FIG00543961: hypothetical protein - none -
fig|6666666.67506.peg.238 CDS gi|448276180|gb|CP004085.1| 291666 294473 3 + 2808 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67506.peg.239 CDS gi|448276180|gb|CP004085.1| 294666 294529 -3 - 138 hypothetical protein - none -
fig|6666666.67506.peg.240 CDS gi|448276180|gb|CP004085.1| 294653 295996 2 + 1344 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.241 CDS gi|448276180|gb|CP004085.1| 296031 296636 3 + 606 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67506.peg.242 CDS gi|448276180|gb|CP004085.1| 296683 297363 1 + 681 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67506.peg.243 CDS gi|448276180|gb|CP004085.1| 297364 298188 1 + 825 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67506.peg.244 CDS gi|448276180|gb|CP004085.1| 298234 299949 1 + 1716 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67506.peg.245 CDS gi|448276180|gb|CP004085.1| 300089 301204 2 + 1116 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67506.peg.246 CDS gi|448276180|gb|CP004085.1| 301246 302349 1 + 1104 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67506.peg.247 CDS gi|448276180|gb|CP004085.1| 303687 302398 -3 - 1290 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67506.peg.248 CDS gi|448276180|gb|CP004085.1| 303820 304524 1 + 705 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67506.peg.249 CDS gi|448276180|gb|CP004085.1| 304531 305409 1 + 879 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67506.peg.250 CDS gi|448276180|gb|CP004085.1| 305420 306598 2 + 1179 FIG00547831: hypothetical protein - none -
fig|6666666.67506.peg.251 CDS gi|448276180|gb|CP004085.1| 306922 306611 -1 - 312 FIG01267924: hypothetical protein - none -
fig|6666666.67506.peg.252 CDS gi|448276180|gb|CP004085.1| 307102 307470 1 + 369 FIG00545743: hypothetical protein - none -
fig|6666666.67506.peg.253 CDS gi|448276180|gb|CP004085.1| 308465 307584 -2 - 882 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67506.peg.254 CDS gi|448276180|gb|CP004085.1| 308710 309372 1 + 663 hypothetical protein - none -
fig|6666666.67506.peg.255 CDS gi|448276180|gb|CP004085.1| 309464 311461 2 + 1998 hypothetical protein - none -
fig|6666666.67506.peg.256 CDS gi|448276180|gb|CP004085.1| 313382 311646 -2 - 1737 putative ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.257 CDS gi|448276180|gb|CP004085.1| 314287 313379 -1 - 909 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67506.peg.258 CDS gi|448276180|gb|CP004085.1| 315268 314291 -1 - 978 putative transport protein - none -
fig|6666666.67506.peg.259 CDS gi|448276180|gb|CP004085.1| 316893 315265 -3 - 1629 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.67506.peg.260 CDS gi|448276180|gb|CP004085.1| 317046 319229 3 + 2184 FIG00544299: hypothetical protein - none -
fig|6666666.67506.peg.261 CDS gi|448276180|gb|CP004085.1| 320572 319226 -1 - 1347 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67506.peg.262 CDS gi|448276180|gb|CP004085.1| 320647 321588 1 + 942 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.263 CDS gi|448276180|gb|CP004085.1| 322564 321608 -1 - 957 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67506.peg.264 CDS gi|448276180|gb|CP004085.1| 322601 323782 2 + 1182 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67506.peg.265 CDS gi|448276180|gb|CP004085.1| 323989 325743 1 + 1755 hypothetical protein - none -
fig|6666666.67506.peg.266 CDS gi|448276180|gb|CP004085.1| 326123 325983 -2 - 141 hypothetical protein - none -
fig|6666666.67506.peg.267 CDS gi|448276180|gb|CP004085.1| 326854 326153 -1 - 702 FIG00547297: hypothetical protein - none -
fig|6666666.67506.peg.268 CDS gi|448276180|gb|CP004085.1| 326960 328963 2 + 2004 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67506.peg.269 CDS gi|448276180|gb|CP004085.1| 328956 329528 3 + 573 FIG00543979: hypothetical protein - none -
fig|6666666.67506.peg.270 CDS gi|448276180|gb|CP004085.1| 329525 330715 2 + 1191 Glycosyltransferase - none -
fig|6666666.67506.peg.271 CDS gi|448276180|gb|CP004085.1| 330797 331444 2 + 648 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67506.peg.272 CDS gi|448276180|gb|CP004085.1| 333022 331586 -1 - 1437 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67506.peg.273 CDS gi|448276180|gb|CP004085.1| 333273 334244 3 + 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Carotenoids;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67506.peg.274 CDS gi|448276180|gb|CP004085.1| 334793 334572 -2 - 222 Mobile element protein - none -
fig|6666666.67506.peg.275 CDS gi|448276180|gb|CP004085.1| 335892 334756 -3 - 1137 Mobile element protein - none -
fig|6666666.67506.peg.276 CDS gi|448276180|gb|CP004085.1| 336946 337083 1 + 138 hypothetical protein - none -
fig|6666666.67506.peg.277 CDS gi|448276180|gb|CP004085.1| 338098 337085 -1 - 1014 hypothetical protein - none -
fig|6666666.67506.peg.278 CDS gi|448276180|gb|CP004085.1| 338316 338849 3 + 534 intracellular protease, PfpI family - none -
fig|6666666.67506.peg.279 CDS gi|448276180|gb|CP004085.1| 339738 338962 -3 - 777 Putative stomatin/prohibitin-family membrane protease subunit PA4582 - none -
fig|6666666.67506.peg.280 CDS gi|448276180|gb|CP004085.1| 340919 341206 2 + 288 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67506.peg.281 CDS gi|448276180|gb|CP004085.1| 342517 341303 -1 - 1215 Mobile element protein - none -
fig|6666666.67506.peg.282 CDS gi|448276180|gb|CP004085.1| 343402 343689 1 + 288 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67506.peg.283 CDS gi|448276180|gb|CP004085.1| 344039 343821 -2 - 219 Mobile element protein - none -
fig|6666666.67506.peg.284 CDS gi|448276180|gb|CP004085.1| 344484 344089 -3 - 396 Mobile element protein - none -
fig|6666666.67506.peg.285 CDS gi|448276180|gb|CP004085.1| 344996 344550 -2 - 447 Mobile element protein - none -
fig|6666666.67506.peg.286 CDS gi|448276180|gb|CP004085.1| 345294 346178 3 + 885 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67506.peg.287 CDS gi|448276180|gb|CP004085.1| 346322 346765 2 + 444 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67506.peg.288 CDS gi|448276180|gb|CP004085.1| 346872 347588 3 + 717 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67506.peg.289 CDS gi|448276180|gb|CP004085.1| 348494 347745 -2 - 750 hypothetical membrane protein - none -
fig|6666666.67506.peg.290 CDS gi|448276180|gb|CP004085.1| 348973 349980 1 + 1008 FIG00548024: hypothetical protein - none -
fig|6666666.67506.peg.291 CDS gi|448276180|gb|CP004085.1| 350031 352592 3 + 2562 periplasmic solute binding protein - none -
fig|6666666.67506.peg.292 CDS gi|448276180|gb|CP004085.1| 352589 353326 2 + 738 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67506.peg.293 CDS gi|448276180|gb|CP004085.1| 353326 355524 1 + 2199 ABC-3 protein - none -
fig|6666666.67506.peg.294 CDS gi|448276180|gb|CP004085.1| 355568 356854 2 + 1287 PE-PGRS FAMILY PROTEIN - none -
fig|6666666.67506.peg.295 CDS gi|448276180|gb|CP004085.1| 356975 358129 2 + 1155 hypothetical protein - none -
fig|6666666.67506.peg.296 CDS gi|448276180|gb|CP004085.1| 358491 359003 3 + 513 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67506.peg.297 CDS gi|448276180|gb|CP004085.1| 359140 359526 1 + 387 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67506.peg.298 CDS gi|448276180|gb|CP004085.1| 359654 360637 2 + 984 FIG00545886: hypothetical protein - none -
fig|6666666.67506.peg.299 CDS gi|448276180|gb|CP004085.1| 360981 364493 3 + 3513 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67506.peg.300 CDS gi|448276180|gb|CP004085.1| 364580 368551 2 + 3972 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67506.peg.301 CDS gi|448276180|gb|CP004085.1| 369413 368676 -2 - 738 hypothetical protein - none -
fig|6666666.67506.peg.302 CDS gi|448276180|gb|CP004085.1| 369587 369784 2 + 198 FIG00545348: hypothetical protein - none -
fig|6666666.67506.peg.303 CDS gi|448276180|gb|CP004085.1| 370224 369781 -3 - 444 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.67506.peg.304 CDS gi|448276180|gb|CP004085.1| 372457 370505 -1 - 1953 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.67506.peg.305 CDS gi|448276180|gb|CP004085.1| 372847 374712 1 + 1866 lipopolysaccharide modification acyltransferase - none -
fig|6666666.67506.peg.306 CDS gi|448276180|gb|CP004085.1| 375081 375452 3 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67506.peg.307 CDS gi|448276180|gb|CP004085.1| 375456 375926 3 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.67506.peg.308 CDS gi|448276180|gb|CP004085.1| 376125 378233 3 + 2109 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67506.peg.309 CDS gi|448276180|gb|CP004085.1| 378664 379854 1 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67506.peg.310 CDS gi|448276180|gb|CP004085.1| 380582 379941 -2 - 642 hypothetical protein - none -
fig|6666666.67506.peg.311 CDS gi|448276180|gb|CP004085.1| 381798 380857 -3 - 942 FIG00545585: hypothetical protein - none -
fig|6666666.67506.peg.312 CDS gi|448276180|gb|CP004085.1| 382750 381953 -1 - 798 FIG00548303: hypothetical protein - none -
fig|6666666.67506.peg.313 CDS gi|448276180|gb|CP004085.1| 384169 384474 1 + 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.67506.peg.314 CDS gi|448276180|gb|CP004085.1| 384526 385182 1 + 657 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67506.peg.315 CDS gi|448276180|gb|CP004085.1| 385179 385856 3 + 678 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67506.peg.316 CDS gi|448276180|gb|CP004085.1| 385853 386161 2 + 309 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67506.peg.317 CDS gi|448276180|gb|CP004085.1| 386199 387035 3 + 837 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67506.peg.318 CDS gi|448276180|gb|CP004085.1| 387052 387330 1 + 279 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.67506.peg.319 CDS gi|448276180|gb|CP004085.1| 387333 387695 3 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67506.peg.320 CDS gi|448276180|gb|CP004085.1| 387695 388441 2 + 747 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.67506.peg.321 CDS gi|448276180|gb|CP004085.1| 388448 388864 2 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67506.peg.322 CDS gi|448276180|gb|CP004085.1| 388864 389097 1 + 234 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67506.peg.323 CDS gi|448276180|gb|CP004085.1| 389094 389372 3 + 279 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.67506.peg.324 CDS gi|448276180|gb|CP004085.1| 389526 390791 3 + 1266 hypothetical protein - none -
fig|6666666.67506.peg.325 CDS gi|448276180|gb|CP004085.1| 390850 392082 1 + 1233 putative multidrug resistance protein - none -
fig|6666666.67506.peg.326 CDS gi|448276180|gb|CP004085.1| 392654 393295 2 + 642 Mobile element protein - none -
fig|6666666.67506.peg.327 CDS gi|448276180|gb|CP004085.1| 393825 393649 -3 - 177 hypothetical protein - none -
fig|6666666.67506.peg.328 CDS gi|448276180|gb|CP004085.1| 397391 393861 -2 - 3531 Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
NAD and NADP cofactor biosynthesis global
fig|6666666.67506.peg.329 CDS gi|448276180|gb|CP004085.1| 398271 397429 -3 - 843 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) of siderophore biosynthesis - none -
fig|6666666.67506.peg.330 CDS gi|448276180|gb|CP004085.1| 399147 398314 -3 - 834 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67506.peg.331 CDS gi|448276180|gb|CP004085.1| 400247 399144 -2 - 1104 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67506.peg.332 CDS gi|448276180|gb|CP004085.1| 401272 400247 -1 - 1026 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67506.peg.333 CDS gi|448276180|gb|CP004085.1| 401619 401269 -3 - 351 siderophore biosynthesis protein, putative - none -
fig|6666666.67506.peg.334 CDS gi|448276180|gb|CP004085.1| 402133 403536 1 + 1404 hypothetical protein - none -
fig|6666666.67506.peg.335 CDS gi|448276180|gb|CP004085.1| 403533 405200 3 + 1668 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.336 CDS gi|448276180|gb|CP004085.1| 405295 406302 1 + 1008 Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) - none -
fig|6666666.67506.peg.337 CDS gi|448276180|gb|CP004085.1| 406257 413813 3 + 7557 hypothetical protein - none -
fig|6666666.67506.peg.338 CDS gi|448276180|gb|CP004085.1| 413816 415912 2 + 2097 Iron-chelator utilization protein - none -
fig|6666666.67506.peg.339 CDS gi|448276180|gb|CP004085.1| 416225 416052 -2 - 174 hypothetical protein - none -
fig|6666666.67506.peg.340 CDS gi|448276180|gb|CP004085.1| 416268 416615 3 + 348 putative iron ABC transport system, solute-binding protein - none -
fig|6666666.67506.peg.341 CDS gi|448276180|gb|CP004085.1| 416769 417245 3 + 477 FIG00544345: hypothetical protein - none -
fig|6666666.67506.peg.342 CDS gi|448276180|gb|CP004085.1| 417314 417682 2 + 369 FIG00544345: hypothetical protein - none -
fig|6666666.67506.peg.343 CDS gi|448276180|gb|CP004085.1| 417802 418632 1 + 831 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.67506.peg.344 CDS gi|448276180|gb|CP004085.1| 418805 419248 2 + 444 Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) - none -
fig|6666666.67506.peg.345 CDS gi|448276180|gb|CP004085.1| 420187 419258 -1 - 930 Siderophore-interacting protein - none -
fig|6666666.67506.peg.346 CDS gi|448276180|gb|CP004085.1| 420783 420379 -3 - 405 hypothetical protein - none -
fig|6666666.67506.peg.347 CDS gi|448276180|gb|CP004085.1| 421269 421640 3 + 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67506.peg.348 CDS gi|448276180|gb|CP004085.1| 421641 421952 3 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67506.peg.349 CDS gi|448276180|gb|CP004085.1| 421955 422536 2 + 582 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67506.peg.350 CDS gi|448276180|gb|CP004085.1| 422740 423228 1 + 489 FIG00546173: hypothetical protein - none -
fig|6666666.67506.peg.351 CDS gi|448276180|gb|CP004085.1| 423392 425455 2 + 2064 Putative phosphatase - none -
fig|6666666.67506.peg.352 CDS gi|448276180|gb|CP004085.1| 425868 425743 -3 - 126 hypothetical protein - none -
fig|6666666.67506.peg.353 CDS gi|448276180|gb|CP004085.1| 425923 426330 1 + 408 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.67506.peg.354 CDS gi|448276180|gb|CP004085.1| 426349 426885 1 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67506.peg.355 CDS gi|448276180|gb|CP004085.1| 426885 427295 3 + 411 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67506.peg.356 CDS gi|448276180|gb|CP004085.1| 427336 427977 1 + 642 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.67506.peg.357 CDS gi|448276180|gb|CP004085.1| 427981 428166 1 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67506.peg.358 CDS gi|448276180|gb|CP004085.1| 428169 428615 3 + 447 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67506.peg.359 CDS gi|448276180|gb|CP004085.1| 428955 428782 -3 - 174 hypothetical protein - none -
fig|6666666.67506.peg.360 CDS gi|448276180|gb|CP004085.1| 428986 430320 1 + 1335 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67506.peg.361 CDS gi|448276180|gb|CP004085.1| 430317 430862 3 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67506.peg.362 CDS gi|448276180|gb|CP004085.1| 431025 431819 3 + 795 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67506.peg.363 CDS gi|448276180|gb|CP004085.1| 432064 432291 1 + 228 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67506.peg.364 CDS gi|448276180|gb|CP004085.1| 432530 432898 2 + 369 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.67506.peg.365 CDS gi|448276180|gb|CP004085.1| 432898 433305 1 + 408 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.67506.peg.366 CDS gi|448276180|gb|CP004085.1| 433331 433936 2 + 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.67506.peg.367 CDS gi|448276180|gb|CP004085.1| 434050 435063 1 + 1014 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67506.peg.368 CDS gi|448276180|gb|CP004085.1| 435110 435580 2 + 471 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67506.peg.369 CDS gi|448276180|gb|CP004085.1| 435840 436814 3 + 975 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.67506.peg.370 CDS gi|448276180|gb|CP004085.1| 436943 437131 2 + 189 hypothetical protein - none -
fig|6666666.67506.peg.371 CDS gi|448276180|gb|CP004085.1| 438980 437976 -2 - 1005 hypothetical protein - none -
fig|6666666.67506.peg.372 CDS gi|448276180|gb|CP004085.1| 439286 439053 -2 - 234 hypothetical protein - none -
fig|6666666.67506.peg.373 CDS gi|448276180|gb|CP004085.1| 439332 440519 3 + 1188 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67506.peg.374 CDS gi|448276180|gb|CP004085.1| 442893 441715 -3 - 1179 FIG01264289: hypothetical protein - none -
fig|6666666.67506.peg.375 CDS gi|448276180|gb|CP004085.1| 443182 446667 1 + 3486 FtsK/SpoIIIE family protein - none -
fig|6666666.67506.peg.376 CDS gi|448276180|gb|CP004085.1| 446667 448103 3 + 1437 FIG00545362: hypothetical protein - none -
fig|6666666.67506.peg.377 CDS gi|448276180|gb|CP004085.1| 448388 448891 2 + 504 hypothetical protein - none -
fig|6666666.67506.peg.378 CDS gi|448276180|gb|CP004085.1| 449670 448972 -3 - 699 hypothetical protein - none -
fig|6666666.67506.peg.379 CDS gi|448276180|gb|CP004085.1| 450278 450535 2 + 258 FIG00543840: hypothetical protein - none -
fig|6666666.67506.peg.380 CDS gi|448276180|gb|CP004085.1| 450610 450891 1 + 282 FIG00544893: hypothetical protein - none -
fig|6666666.67506.peg.381 CDS gi|448276180|gb|CP004085.1| 451339 451782 1 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67506.peg.382 CDS gi|448276180|gb|CP004085.1| 451782 452327 3 + 546 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.67506.peg.383 CDS gi|448276180|gb|CP004085.1| 452703 454313 3 + 1611 Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
5-FCL-like protein;
Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.67506.peg.384 CDS gi|448276180|gb|CP004085.1| 454340 454468 2 + 129 hypothetical protein - none -
fig|6666666.67506.peg.385 CDS gi|448276180|gb|CP004085.1| 454480 455820 1 + 1341 Phosphoglucosamine mutase (EC 5.4.2.10) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67506.peg.386 CDS gi|448276180|gb|CP004085.1| 455929 456309 1 + 381 hypothetical protein - none -
fig|6666666.67506.peg.387 CDS gi|448276180|gb|CP004085.1| 456306 457412 3 + 1107 hypothetical protein - none -
fig|6666666.67506.peg.388 CDS gi|448276180|gb|CP004085.1| 457406 457750 2 + 345 hypothetical protein - none -
fig|6666666.67506.peg.389 CDS gi|448276180|gb|CP004085.1| 458461 457781 -1 - 681 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67506.peg.390 CDS gi|448276180|gb|CP004085.1| 459402 458599 -3 - 804 putative transcription regulator - none -
fig|6666666.67506.peg.391 CDS gi|448276180|gb|CP004085.1| 460442 459558 -2 - 885 FIG00548108: hypothetical protein - none -
fig|6666666.67506.peg.392 CDS gi|448276180|gb|CP004085.1| 460586 462379 2 + 1794 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67506.peg.393 CDS gi|448276180|gb|CP004085.1| 462479 463420 2 + 942 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67506.peg.394 CDS gi|448276180|gb|CP004085.1| 463431 464693 3 + 1263 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67506.peg.395 CDS gi|448276180|gb|CP004085.1| 464707 465309 1 + 603 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67506.peg.396 CDS gi|448276180|gb|CP004085.1| 465513 468086 3 + 2574 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.67506.peg.397 CDS gi|448276180|gb|CP004085.1| 468469 468305 -1 - 165 hypothetical protein - none -
fig|6666666.67506.peg.398 CDS gi|448276180|gb|CP004085.1| 468483 468782 3 + 300 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67506.peg.399 CDS gi|448276180|gb|CP004085.1| 468794 470407 2 + 1614 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67506.peg.400 CDS gi|448276180|gb|CP004085.1| 471240 470806 -3 - 435 FIG00544572: hypothetical protein - none -
fig|6666666.67506.peg.401 CDS gi|448276180|gb|CP004085.1| 471435 472994 3 + 1560 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67506.peg.402 CDS gi|448276180|gb|CP004085.1| 473140 474318 1 + 1179 Inosine-5@1-monophosphate dehydrogenase, catalytic domain (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67506.peg.403 CDS gi|448276180|gb|CP004085.1| 474559 474398 -1 - 162 hypothetical protein - none -
fig|6666666.67506.peg.404 CDS gi|448276180|gb|CP004085.1| 474545 475576 2 + 1032 periplasmic binding protein - none -
fig|6666666.67506.peg.405 CDS gi|448276180|gb|CP004085.1| 475579 476685 1 + 1107 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67506.peg.406 CDS gi|448276180|gb|CP004085.1| 476682 477506 3 + 825 putative ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.407 CDS gi|448276180|gb|CP004085.1| 477734 479305 2 + 1572 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) GMP synthase;
GMP synthase;
Purine conversions;
Purine conversions;
Purine salvage cluster;
Purine salvage cluster
fig|6666666.67506.peg.408 CDS gi|448276180|gb|CP004085.1| 479867 479484 -2 - 384 hypothetical membrane protein - none -
fig|6666666.67506.peg.409 CDS gi|448276180|gb|CP004085.1| 480289 481131 1 + 843 FIG00544716: hypothetical protein - none -
fig|6666666.67506.peg.410 CDS gi|448276180|gb|CP004085.1| 481152 482798 3 + 1647 DNA polymerase IV-like protein ImuB DNA repair, bacterial;
DNA replication strays
fig|6666666.67506.peg.411 CDS gi|448276180|gb|CP004085.1| 483059 483745 2 + 687 putative secreted protein - none -
fig|6666666.67506.peg.412 CDS gi|448276180|gb|CP004085.1| 483868 485031 1 + 1164 FIG00546271: hypothetical protein - none -
fig|6666666.67506.peg.413 CDS gi|448276180|gb|CP004085.1| 485024 485779 2 + 756 branched-chain amino acid transport protein - none -
fig|6666666.67506.peg.414 CDS gi|448276180|gb|CP004085.1| 485776 486177 1 + 402 hypothetical membrane protein - none -
fig|6666666.67506.peg.415 CDS gi|448276180|gb|CP004085.1| 487161 486412 -3 - 750 Methionine ABC transporter permease protein Methionine Biosynthesis
fig|6666666.67506.peg.416 CDS gi|448276180|gb|CP004085.1| 488249 487158 -2 - 1092 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.67506.peg.417 CDS gi|448276180|gb|CP004085.1| 489203 488334 -2 - 870 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.67506.peg.418 CDS gi|448276180|gb|CP004085.1| 489676 492882 1 + 3207 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) DNA replication strays
fig|6666666.67506.peg.419 CDS gi|448276180|gb|CP004085.1| 493120 494406 1 + 1287 FIG00545135: hypothetical protein - none -
fig|6666666.67506.peg.420 CDS gi|448276180|gb|CP004085.1| 494545 495204 1 + 660 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67506.peg.421 CDS gi|448276180|gb|CP004085.1| 495228 496892 3 + 1665 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67506.peg.422 CDS gi|448276180|gb|CP004085.1| 496889 497674 2 + 786 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67506.peg.423 CDS gi|448276180|gb|CP004085.1| 497871 498443 3 + 573 FIG00546937: hypothetical protein - none -
fig|6666666.67506.peg.424 CDS gi|448276180|gb|CP004085.1| 499867 498461 -1 - 1407 putative membrane protein - none -
fig|6666666.67506.peg.425 CDS gi|448276180|gb|CP004085.1| 499979 500509 2 + 531 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) ## TrmL RNA methylation
fig|6666666.67506.peg.426 CDS gi|448276180|gb|CP004085.1| 500595 501458 3 + 864 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67506.peg.427 CDS gi|448276180|gb|CP004085.1| 501489 501860 3 + 372 FIG00547414: hypothetical protein - none -
fig|6666666.67506.peg.428 CDS gi|448276180|gb|CP004085.1| 503107 501941 -1 - 1167 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67506.peg.429 CDS gi|448276180|gb|CP004085.1| 504445 503123 -1 - 1323 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67506.peg.430 CDS gi|448276180|gb|CP004085.1| 504953 505633 2 + 681 Uncharacterized protein conserved in bacteria - none -
fig|6666666.67506.peg.431 CDS gi|448276180|gb|CP004085.1| 507969 505732 -3 - 2238 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.67506.peg.432 CDS gi|448276180|gb|CP004085.1| 508193 509410 2 + 1218 putative transport protein - none -
fig|6666666.67506.peg.433 CDS gi|448276180|gb|CP004085.1| 509465 510499 2 + 1035 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67506.peg.434 CDS gi|448276180|gb|CP004085.1| 510517 511398 1 + 882 FIG00545435: hypothetical protein - none -
fig|6666666.67506.peg.435 CDS gi|448276180|gb|CP004085.1| 511410 512462 3 + 1053 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67506.peg.436 CDS gi|448276180|gb|CP004085.1| 512598 513695 3 + 1098 putative membrane protein - none -
fig|6666666.67506.peg.437 CDS gi|448276180|gb|CP004085.1| 513788 515158 2 + 1371 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.67506.peg.438 CDS gi|448276180|gb|CP004085.1| 515314 516345 1 + 1032 Inositol transport system sugar-binding protein - none -
fig|6666666.67506.peg.439 CDS gi|448276180|gb|CP004085.1| 516346 517494 1 + 1149 Inositol transport system permease protein - none -
fig|6666666.67506.peg.440 CDS gi|448276180|gb|CP004085.1| 517491 518393 3 + 903 Inositol transport system ATP-binding protein - none -
fig|6666666.67506.peg.441 CDS gi|448276180|gb|CP004085.1| 519802 518522 -1 - 1281 FIG00549131: hypothetical protein - none -
fig|6666666.67506.peg.442 CDS gi|448276180|gb|CP004085.1| 519990 519814 -3 - 177 hypothetical protein - none -
fig|6666666.67506.peg.443 CDS gi|448276180|gb|CP004085.1| 521149 520088 -1 - 1062 FIG00546306: hypothetical protein - none -
fig|6666666.67506.peg.444 CDS gi|448276180|gb|CP004085.1| 521433 521185 -3 - 249 hypothetical protein - none -
fig|6666666.67506.peg.445 CDS gi|448276180|gb|CP004085.1| 521394 521675 3 + 282 hypothetical protein - none -
fig|6666666.67506.peg.446 CDS gi|448276180|gb|CP004085.1| 522134 521628 -2 - 507 hypothetical protein - none -
fig|6666666.67506.peg.447 CDS gi|448276180|gb|CP004085.1| 523886 522279 -2 - 1608 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67506.peg.448 CDS gi|448276180|gb|CP004085.1| 524731 523883 -1 - 849 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.67506.peg.449 CDS gi|448276180|gb|CP004085.1| 524875 526086 1 + 1212 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67506.peg.450 CDS gi|448276180|gb|CP004085.1| 526610 526131 -2 - 480 FIG00546700: hypothetical protein - none -
fig|6666666.67506.peg.451 CDS gi|448276180|gb|CP004085.1| 528335 526722 -2 - 1614 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.452 CDS gi|448276180|gb|CP004085.1| 528932 528354 -2 - 579 FIG00547459: hypothetical protein - none -
fig|6666666.67506.peg.453 CDS gi|448276180|gb|CP004085.1| 528969 529088 3 + 120 hypothetical protein - none -
fig|6666666.67506.peg.454 CDS gi|448276180|gb|CP004085.1| 531084 529249 -3 - 1836 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67506.peg.455 CDS gi|448276180|gb|CP004085.1| 531325 532848 1 + 1524 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle
fig|6666666.67506.peg.456 CDS gi|448276180|gb|CP004085.1| 532989 534176 3 + 1188 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle
fig|6666666.67506.peg.457 CDS gi|448276180|gb|CP004085.1| 534946 534296 -1 - 651 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67506.peg.458 CDS gi|448276180|gb|CP004085.1| 535341 535009 -3 - 333 FIG00546164: hypothetical protein - none -
fig|6666666.67506.peg.459 CDS gi|448276180|gb|CP004085.1| 536889 535393 -3 - 1497 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.67506.peg.460 CDS gi|448276180|gb|CP004085.1| 536962 537873 1 + 912 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.67506.peg.461 CDS gi|448276180|gb|CP004085.1| 537873 538415 3 + 543 FIG00545249: hypothetical protein - none -
fig|6666666.67506.peg.462 CDS gi|448276180|gb|CP004085.1| 538412 539746 2 + 1335 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67506.peg.463 CDS gi|448276180|gb|CP004085.1| 539777 540304 2 + 528 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67506.peg.464 CDS gi|448276180|gb|CP004085.1| 540412 541428 1 + 1017 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.67506.peg.465 CDS gi|448276180|gb|CP004085.1| 541559 541425 -2 - 135 hypothetical protein - none -
fig|6666666.67506.peg.466 CDS gi|448276180|gb|CP004085.1| 541582 541806 1 + 225 hypothetical protein - none -
fig|6666666.67506.peg.467 CDS gi|448276180|gb|CP004085.1| 542219 541929 -2 - 291 hypothetical protein - none -
fig|6666666.67506.peg.468 CDS gi|448276180|gb|CP004085.1| 543063 542233 -3 - 831 ABC sugar transporter, permease component - none -
fig|6666666.67506.peg.469 CDS gi|448276180|gb|CP004085.1| 544262 543060 -2 - 1203 Maltose/maltodextrin ABC transporter, permease protein MalF - none -
fig|6666666.67506.peg.470 CDS gi|448276180|gb|CP004085.1| 545683 544430 -1 - 1254 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis
fig|6666666.67506.peg.471 CDS gi|448276180|gb|CP004085.1| 546946 545870 -1 - 1077 Various polyols ABC transporter, ATP-binding component Uptake of selenate and selenite
fig|6666666.67506.peg.472 CDS gi|448276180|gb|CP004085.1| 547008 548261 3 + 1254 Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.473 CDS gi|448276180|gb|CP004085.1| 548358 549152 3 + 795 Hemoglobin, heme-dependent two component system response regulator ChrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.474 CDS gi|448276180|gb|CP004085.1| 549334 550305 1 + 972 putative ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.475 CDS gi|448276180|gb|CP004085.1| 550371 551129 3 + 759 Putative ABc transport system integral membrane protein - none -
fig|6666666.67506.peg.476 CDS gi|448276180|gb|CP004085.1| 552011 551226 -2 - 786 FIG00545912: hypothetical protein - none -
fig|6666666.67506.peg.477 CDS gi|448276180|gb|CP004085.1| 553827 552049 -3 - 1779 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67506.peg.478 CDS gi|448276180|gb|CP004085.1| 554020 555126 1 + 1107 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67506.peg.479 CDS gi|448276180|gb|CP004085.1| 555137 556093 2 + 957 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67506.peg.480 CDS gi|448276180|gb|CP004085.1| 556373 557485 2 + 1113 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67506.peg.481 CDS gi|448276180|gb|CP004085.1| 557916 558281 3 + 366 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67506.peg.482 CDS gi|448276180|gb|CP004085.1| 558815 558408 -2 - 408 FIG00544777: hypothetical protein - none -
fig|6666666.67506.peg.483 CDS gi|448276180|gb|CP004085.1| 559018 559431 1 + 414 FIG00543823: hypothetical protein - none -
fig|6666666.67506.peg.484 CDS gi|448276180|gb|CP004085.1| 559509 560897 3 + 1389 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67506.peg.485 CDS gi|448276180|gb|CP004085.1| 561027 562298 3 + 1272 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67506.peg.486 CDS gi|448276180|gb|CP004085.1| 563115 562303 -3 - 813 FIG00544185: hypothetical protein - none -
fig|6666666.67506.peg.487 CDS gi|448276180|gb|CP004085.1| 563385 564872 3 + 1488 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Biosynthesis
fig|6666666.67506.peg.488 CDS gi|448276180|gb|CP004085.1| 564936 565631 3 + 696 Thymidylate kinase (EC 2.7.4.9) - none -
fig|6666666.67506.peg.489 CDS gi|448276180|gb|CP004085.1| 565713 566393 3 + 681 DNA-binding response regulator mtrA - none -
fig|6666666.67506.peg.490 CDS gi|448276180|gb|CP004085.1| 566661 568499 3 + 1839 Putative two component system sensor kinase - none -
fig|6666666.67506.peg.491 CDS gi|448276180|gb|CP004085.1| 568496 570226 2 + 1731 LpqB - none -
fig|6666666.67506.peg.492 CDS gi|448276180|gb|CP004085.1| 570339 571049 3 + 711 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental
fig|6666666.67506.peg.493 CDS gi|448276180|gb|CP004085.1| 571186 571863 1 + 678 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67506.peg.494 CDS gi|448276180|gb|CP004085.1| 572038 574632 1 + 2595 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67506.peg.495 CDS gi|448276180|gb|CP004085.1| 575277 574633 -3 - 645 hypothetical protein - none -
fig|6666666.67506.peg.496 CDS gi|448276180|gb|CP004085.1| 575393 575803 2 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.67506.peg.497 CDS gi|448276180|gb|CP004085.1| 575805 576323 3 + 519 FIG00544397: hypothetical protein - none -
fig|6666666.67506.peg.498 CDS gi|448276180|gb|CP004085.1| 577430 576420 -2 - 1011 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.67506.peg.499 CDS gi|448276180|gb|CP004085.1| 578837 577434 -2 - 1404 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67506.peg.500 CDS gi|448276180|gb|CP004085.1| 578875 579582 1 + 708 FIG00543821: hypothetical protein - none -
fig|6666666.67506.peg.501 CDS gi|448276180|gb|CP004085.1| 581704 579731 -1 - 1974 hypothetical protein - none -
fig|6666666.67506.peg.502 CDS gi|448276180|gb|CP004085.1| 584590 581777 -1 - 2814 hypothetical protein - none -
fig|6666666.67506.peg.503 CDS gi|448276180|gb|CP004085.1| 584961 585593 3 + 633 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.67506.peg.504 CDS gi|448276180|gb|CP004085.1| 585606 585890 3 + 285 FIG00544827: hypothetical protein - none -
fig|6666666.67506.peg.505 CDS gi|448276180|gb|CP004085.1| 586543 586277 -1 - 267 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67506.peg.506 CDS gi|448276180|gb|CP004085.1| 587148 587597 3 + 450 FIG00543921: hypothetical protein - none -
fig|6666666.67506.peg.507 CDS gi|448276180|gb|CP004085.1| 588871 587594 -1 - 1278 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67506.peg.508 CDS gi|448276180|gb|CP004085.1| 590292 588871 -3 - 1422 putative ATP-dependent RNA helicase - none -
fig|6666666.67506.peg.509 CDS gi|448276180|gb|CP004085.1| 590467 590700 1 + 234 FIG00543928: hypothetical protein - none -
fig|6666666.67506.peg.510 CDS gi|448276180|gb|CP004085.1| 590733 591737 3 + 1005 FIG00544386: hypothetical protein - none -
fig|6666666.67506.peg.511 CDS gi|448276180|gb|CP004085.1| 591751 592848 1 + 1098 FIG00544868: hypothetical protein - none -
fig|6666666.67506.peg.512 CDS gi|448276180|gb|CP004085.1| 592933 596499 1 + 3567 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67506.peg.513 CDS gi|448276180|gb|CP004085.1| 596580 600155 3 + 3576 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67506.peg.514 CDS gi|448276180|gb|CP004085.1| 600306 601367 3 + 1062 Potassium channel protein Potassium homeostasis
fig|6666666.67506.peg.515 CDS gi|448276180|gb|CP004085.1| 601368 603518 3 + 2151 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67506.peg.516 CDS gi|448276180|gb|CP004085.1| 604413 603547 -3 - 867 FIG00544187: hypothetical protein - none -
fig|6666666.67506.peg.517 CDS gi|448276180|gb|CP004085.1| 604744 605340 1 + 597 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67506.peg.518 CDS gi|448276180|gb|CP004085.1| 607195 605417 -1 - 1779 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67506.peg.519 CDS gi|448276180|gb|CP004085.1| 607282 608358 1 + 1077 Lon-like protease with PDZ domain CBSS-269801.1.peg.1715
fig|6666666.67506.peg.520 CDS gi|448276180|gb|CP004085.1| 608947 608384 -1 - 564 FIG129854: hypothetical protein - none -
fig|6666666.67506.peg.521 CDS gi|448276180|gb|CP004085.1| 609056 612067 2 + 3012 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67506.peg.522 CDS gi|448276180|gb|CP004085.1| 613000 613389 1 + 390 hypothetical protein - none -
fig|6666666.67506.peg.523 CDS gi|448276180|gb|CP004085.1| 613435 613857 1 + 423 FIG00543983: hypothetical protein - none -
fig|6666666.67506.peg.524 CDS gi|448276180|gb|CP004085.1| 615254 613989 -2 - 1266 hypothetical protein - none -
fig|6666666.67506.peg.525 CDS gi|448276180|gb|CP004085.1| 617131 615365 -1 - 1767 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.67506.peg.526 CDS gi|448276180|gb|CP004085.1| 617937 617128 -3 - 810 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67506.peg.527 CDS gi|448276180|gb|CP004085.1| 618116 618961 2 + 846 putative secreted protein - none -
fig|6666666.67506.peg.528 CDS gi|448276180|gb|CP004085.1| 619467 619138 -3 - 330 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67506.peg.529 CDS gi|448276180|gb|CP004085.1| 619548 622616 3 + 3069 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67506.peg.530 CDS gi|448276180|gb|CP004085.1| 623474 622731 -2 - 744 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67506.peg.531 CDS gi|448276180|gb|CP004085.1| 624158 625651 2 + 1494 FIG00544804: hypothetical protein - none -
fig|6666666.67506.peg.532 CDS gi|448276180|gb|CP004085.1| 625651 626301 1 + 651 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.67506.peg.533 CDS gi|448276180|gb|CP004085.1| 626294 627907 2 + 1614 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67506.peg.534 CDS gi|448276180|gb|CP004085.1| 628063 629256 1 + 1194 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67506.peg.535 CDS gi|448276180|gb|CP004085.1| 630287 629313 -2 - 975 putative transport protein - none -
fig|6666666.67506.peg.536 CDS gi|448276180|gb|CP004085.1| 631195 630425 -1 - 771 FIG00544119: hypothetical protein - none -
fig|6666666.67506.peg.537 CDS gi|448276180|gb|CP004085.1| 631449 632942 3 + 1494 ATP-dependent Zn protease - none -
fig|6666666.67506.peg.538 CDS gi|448276180|gb|CP004085.1| 633338 633090 -2 - 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67506.peg.539 CDS gi|448276180|gb|CP004085.1| 633661 633356 -1 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.67506.peg.540 CDS gi|448276180|gb|CP004085.1| 633829 633665 -1 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67506.peg.541 CDS gi|448276180|gb|CP004085.1| 634068 633832 -3 - 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67506.peg.542 CDS gi|448276180|gb|CP004085.1| 634428 634697 3 + 270 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67506.peg.543 CDS gi|448276180|gb|CP004085.1| 634720 634887 1 + 168 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67506.peg.544 CDS gi|448276180|gb|CP004085.1| 635086 635781 1 + 696 two-component system, response regulator - none -
fig|6666666.67506.peg.545 CDS gi|448276180|gb|CP004085.1| 635778 637367 3 + 1590 Sensor protein basS/pmrB (EC 2.7.3.-) - none -
fig|6666666.67506.peg.546 CDS gi|448276180|gb|CP004085.1| 637414 638907 1 + 1494 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67506.peg.547 CDS gi|448276180|gb|CP004085.1| 639012 639659 3 + 648 molybdopterin biosynthesis enzyme - none -
fig|6666666.67506.peg.548 CDS gi|448276180|gb|CP004085.1| 639660 639857 3 + 198 hypothetical protein - none -
fig|6666666.67506.peg.549 CDS gi|448276180|gb|CP004085.1| 640372 639908 -1 - 465 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67506.peg.550 CDS gi|448276180|gb|CP004085.1| 641269 640412 -1 - 858 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67506.peg.551 CDS gi|448276180|gb|CP004085.1| 641372 642160 2 + 789 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67506.peg.552 CDS gi|448276180|gb|CP004085.1| 642165 643403 3 + 1239 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67506.peg.553 CDS gi|448276180|gb|CP004085.1| 643629 644204 3 + 576 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.554 CDS gi|448276180|gb|CP004085.1| 644386 645717 1 + 1332 FIG00544639: hypothetical protein - none -
fig|6666666.67506.peg.555 CDS gi|448276180|gb|CP004085.1| 645751 646173 1 + 423 FIG00544115: hypothetical protein - none -
fig|6666666.67506.peg.556 CDS gi|448276180|gb|CP004085.1| 646240 647055 1 + 816 hypothetical membrane protein - none -
fig|6666666.67506.peg.557 CDS gi|448276180|gb|CP004085.1| 648638 647064 -2 - 1575 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67506.peg.558 CDS gi|448276180|gb|CP004085.1| 648692 649624 2 + 933 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67506.peg.559 CDS gi|448276180|gb|CP004085.1| 649807 651750 1 + 1944 Glycine betaine transporter OpuD Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67506.peg.560 CDS gi|448276180|gb|CP004085.1| 651861 653696 3 + 1836 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67506.peg.561 CDS gi|448276180|gb|CP004085.1| 653718 654575 3 + 858 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67506.peg.562 CDS gi|448276180|gb|CP004085.1| 654839 655999 2 + 1161 Cell wall-binding protein - none -
fig|6666666.67506.peg.563 CDS gi|448276180|gb|CP004085.1| 656104 657063 1 + 960 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.564 CDS gi|448276180|gb|CP004085.1| 657060 658112 3 + 1053 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67506.peg.565 CDS gi|448276180|gb|CP004085.1| 658195 660039 1 + 1845 ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.566 CDS gi|448276180|gb|CP004085.1| 660098 660421 2 + 324 FIG00544339: hypothetical protein - none -
fig|6666666.67506.peg.567 CDS gi|448276180|gb|CP004085.1| 660506 661591 2 + 1086 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67506.peg.568 CDS gi|448276180|gb|CP004085.1| 662221 661598 -1 - 624 Transcriptional regulator, TetR family - none -
fig|6666666.67506.peg.569 CDS gi|448276180|gb|CP004085.1| 662617 663492 1 + 876 FIG00545275: hypothetical protein - none -
fig|6666666.67506.peg.570 CDS gi|448276180|gb|CP004085.1| 663542 664207 2 + 666 FIG00544483: hypothetical protein - none -
fig|6666666.67506.peg.571 CDS gi|448276180|gb|CP004085.1| 665963 664317 -2 - 1647 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67506.peg.572 CDS gi|448276180|gb|CP004085.1| 666054 667028 3 + 975 hypothetical protein - none -
fig|6666666.67506.peg.573 CDS gi|448276180|gb|CP004085.1| 667177 668664 1 + 1488 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67506.peg.574 CDS gi|448276180|gb|CP004085.1| 669399 668752 -3 - 648 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67506.peg.575 CDS gi|448276180|gb|CP004085.1| 670175 669537 -2 - 639 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67506.peg.576 CDS gi|448276180|gb|CP004085.1| 671510 670551 -2 - 960 hypothetical protein - none -
fig|6666666.67506.peg.577 CDS gi|448276180|gb|CP004085.1| 672669 671698 -3 - 972 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67506.peg.578 CDS gi|448276180|gb|CP004085.1| 674390 672834 -2 - 1557 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67506.peg.579 CDS gi|448276180|gb|CP004085.1| 674364 674513 3 + 150 hypothetical protein - none -
fig|6666666.67506.peg.580 CDS gi|448276180|gb|CP004085.1| 675859 674510 -1 - 1350 Putative membrane protein - none -
fig|6666666.67506.peg.581 CDS gi|448276180|gb|CP004085.1| 676173 679838 3 + 3666 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67506.peg.582 CDS gi|448276180|gb|CP004085.1| 679922 681415 2 + 1494 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67506.peg.583 CDS gi|448276180|gb|CP004085.1| 681426 682109 3 + 684 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67506.peg.584 CDS gi|448276180|gb|CP004085.1| 682195 683028 1 + 834 FIG00545464: hypothetical protein - none -
fig|6666666.67506.peg.585 CDS gi|448276180|gb|CP004085.1| 683696 683061 -2 - 636 hypothetical protein - none -
fig|6666666.67506.peg.586 CDS gi|448276180|gb|CP004085.1| 683894 685171 2 + 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.67506.peg.587 CDS gi|448276180|gb|CP004085.1| 685353 685901 3 + 549 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67506.peg.588 CDS gi|448276180|gb|CP004085.1| 685976 686575 2 + 600 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67506.peg.589 CDS gi|448276180|gb|CP004085.1| 686580 687581 3 + 1002 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67506.peg.590 CDS gi|448276180|gb|CP004085.1| 688675 687764 -1 - 912 hypothetical protein - none -
fig|6666666.67506.peg.591 CDS gi|448276180|gb|CP004085.1| 688763 689512 2 + 750 Short chain dehydrogenase - none -
fig|6666666.67506.peg.592 CDS gi|448276180|gb|CP004085.1| 691233 689635 -3 - 1599 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.593 CDS gi|448276180|gb|CP004085.1| 691505 692401 2 + 897 FIG00543890: hypothetical protein - none -
fig|6666666.67506.peg.594 CDS gi|448276180|gb|CP004085.1| 694575 692497 -3 - 2079 Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Aromatic Amin Catabolism
fig|6666666.67506.peg.595 CDS gi|448276180|gb|CP004085.1| 695880 695128 -3 - 753 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.596 CDS gi|448276180|gb|CP004085.1| 696766 695858 -1 - 909 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.597 CDS gi|448276180|gb|CP004085.1| 697969 696773 -1 - 1197 putative beta-ketoadipyl CoA thiolase( EC:2.3.1.9 ) - none -
fig|6666666.67506.peg.598 CDS gi|448276180|gb|CP004085.1| 698768 697986 -2 - 783 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.599 CDS gi|448276180|gb|CP004085.1| 699954 698785 -3 - 1170 Phenylacetate-CoA oxygenase/reductase, PaaK subunit - none -
fig|6666666.67506.peg.600 CDS gi|448276180|gb|CP004085.1| 700485 699955 -3 - 531 Phenylacetate-CoA oxygenase, PaaJ subunit - none -
fig|6666666.67506.peg.601 CDS gi|448276180|gb|CP004085.1| 701363 700530 -2 - 834 Phenylacetate-CoA oxygenase, PaaI subunit - none -
fig|6666666.67506.peg.602 CDS gi|448276180|gb|CP004085.1| 701659 701360 -1 - 300 Phenylacetate-CoA oxygenase, PaaH subunit - none -
fig|6666666.67506.peg.603 CDS gi|448276180|gb|CP004085.1| 702684 701689 -3 - 996 Phenylacetate-CoA oxygenase, PaaG subunit - none -
fig|6666666.67506.peg.604 CDS gi|448276180|gb|CP004085.1| 703138 702779 -1 - 360 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.67506.peg.605 CDS gi|448276180|gb|CP004085.1| 704181 705497 3 + 1317 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) - none -
fig|6666666.67506.peg.606 CDS gi|448276180|gb|CP004085.1| 705639 707600 3 + 1962 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67506.peg.607 CDS gi|448276180|gb|CP004085.1| 708237 707713 -3 - 525 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67506.peg.608 CDS gi|448276180|gb|CP004085.1| 708941 708465 -2 - 477 FIG00544319: hypothetical protein - none -
fig|6666666.67506.peg.609 CDS gi|448276180|gb|CP004085.1| 709064 710041 2 + 978 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67506.peg.610 CDS gi|448276180|gb|CP004085.1| 710103 710585 3 + 483 FIG00545712: hypothetical protein - none -
fig|6666666.67506.peg.611 CDS gi|448276180|gb|CP004085.1| 710604 711419 3 + 816 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67506.peg.612 CDS gi|448276180|gb|CP004085.1| 712439 711492 -2 - 948 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67506.peg.613 CDS gi|448276180|gb|CP004085.1| 712614 713915 3 + 1302 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.67506.peg.614 CDS gi|448276180|gb|CP004085.1| 713918 714592 2 + 675 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67506.peg.615 CDS gi|448276180|gb|CP004085.1| 715883 714714 -2 - 1170 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67506.peg.616 CDS gi|448276180|gb|CP004085.1| 716705 716346 -2 - 360 FIG00546727: hypothetical protein - none -
fig|6666666.67506.peg.617 CDS gi|448276180|gb|CP004085.1| 716899 717711 1 + 813 putative LysR-family transcriptional regulator - none -
fig|6666666.67506.peg.618 CDS gi|448276180|gb|CP004085.1| 717727 718341 1 + 615 sortase or related acyltransferase - none -
fig|6666666.67506.peg.619 CDS gi|448276180|gb|CP004085.1| 720076 718517 -1 - 1560 permease of the major facilitator superfamily - none -
fig|6666666.67506.peg.620 CDS gi|448276180|gb|CP004085.1| 720729 720145 -3 - 585 putative transcriptional regulator (TetR family) - none -
fig|6666666.67506.peg.621 CDS gi|448276180|gb|CP004085.1| 722457 721054 -3 - 1404 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67506.peg.622 CDS gi|448276180|gb|CP004085.1| 723652 722624 -1 - 1029 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67506.peg.623 CDS gi|448276180|gb|CP004085.1| 723878 724537 2 + 660 FIG00545451: hypothetical protein - none -
fig|6666666.67506.peg.624 CDS gi|448276180|gb|CP004085.1| 724856 724542 -2 - 315 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67506.peg.625 CDS gi|448276180|gb|CP004085.1| 726138 724885 -3 - 1254 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67506.peg.626 CDS gi|448276180|gb|CP004085.1| 726321 727349 3 + 1029 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67506.peg.627 CDS gi|448276180|gb|CP004085.1| 728293 727532 -1 - 762 FIG00544176: hypothetical protein - none -
fig|6666666.67506.peg.628 CDS gi|448276180|gb|CP004085.1| 730023 728368 -3 - 1656 FIG00546199: hypothetical protein - none -
fig|6666666.67506.peg.629 CDS gi|448276180|gb|CP004085.1| 730289 730122 -2 - 168 FIG00547082: hypothetical protein - none -
fig|6666666.67506.peg.630 CDS gi|448276180|gb|CP004085.1| 732015 730291 -3 - 1725 Sodium-dependent transporter - none -
fig|6666666.67506.peg.631 CDS gi|448276180|gb|CP004085.1| 732200 733285 2 + 1086 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.67506.peg.632 CDS gi|448276180|gb|CP004085.1| 733698 734504 3 + 807 Abortive infection bacteriophage resistance protein - none -
fig|6666666.67506.peg.633 CDS gi|448276180|gb|CP004085.1| 735586 734903 -1 - 684 hypothetical protein - none -
fig|6666666.67506.peg.634 CDS gi|448276180|gb|CP004085.1| 737131 735746 -1 - 1386 hypothetical protein - none -
fig|6666666.67506.peg.635 CDS gi|448276180|gb|CP004085.1| 737486 737355 -2 - 132 hypothetical protein - none -
fig|6666666.67506.peg.636 CDS gi|448276180|gb|CP004085.1| 739163 737733 -2 - 1431 transposase IS4 family protein - none -
fig|6666666.67506.peg.637 CDS gi|448276180|gb|CP004085.1| 739640 739804 2 + 165 Mobile element protein - none -
fig|6666666.67506.peg.638 CDS gi|448276180|gb|CP004085.1| 739947 740159 3 + 213 Mobile element protein - none -
fig|6666666.67506.peg.639 CDS gi|448276180|gb|CP004085.1| 740205 741065 3 + 861 Abortive infection bacteriophage resistance protein - none -
fig|6666666.67506.peg.640 CDS gi|448276180|gb|CP004085.1| 742024 741722 -1 - 303 FIG00548336: hypothetical protein - none -
fig|6666666.67506.peg.641 CDS gi|448276180|gb|CP004085.1| 743490 742069 -3 - 1422 Mercuric ion reductase (EC 1.16.1.1) Mercuric reductase;
Mercury resistance operon
fig|6666666.67506.peg.642 CDS gi|448276180|gb|CP004085.1| 743589 743978 3 + 390 Mercuric resistance operon regulatory protein Mercury resistance operon
fig|6666666.67506.peg.643 CDS gi|448276180|gb|CP004085.1| 744150 744022 -3 - 129 FIG00547613: hypothetical protein - none -
fig|6666666.67506.peg.644 CDS gi|448276180|gb|CP004085.1| 746483 744591 -2 - 1893 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67506.peg.645 CDS gi|448276180|gb|CP004085.1| 746839 746480 -1 - 360 putative transcriptional regulator (ArsR family) - none -
fig|6666666.67506.peg.646 CDS gi|448276180|gb|CP004085.1| 747074 746922 -2 - 153 alkanal monooxygenase - none -
fig|6666666.67506.peg.647 CDS gi|448276180|gb|CP004085.1| 747799 747257 -1 - 543 hypothetical protein - none -
fig|6666666.67506.peg.648 CDS gi|448276180|gb|CP004085.1| 748101 748541 3 + 441 FIG00544626: hypothetical protein - none -
fig|6666666.67506.peg.649 CDS gi|448276180|gb|CP004085.1| 748610 750400 2 + 1791 hypothetical protein - none -
fig|6666666.67506.peg.650 CDS gi|448276180|gb|CP004085.1| 751738 750455 -1 - 1284 hypothetical protein - none -
fig|6666666.67506.peg.651 CDS gi|448276180|gb|CP004085.1| 752814 751780 -3 - 1035 hypothetical protein - none -
fig|6666666.67506.peg.652 CDS gi|448276180|gb|CP004085.1| 753485 752811 -2 - 675 Two-component response regulator - none -
fig|6666666.67506.peg.653 CDS gi|448276180|gb|CP004085.1| 753562 754449 1 + 888 Putative membrane protein - none -
fig|6666666.67506.peg.654 CDS gi|448276180|gb|CP004085.1| 754430 755311 2 + 882 hypothetical protein - none -
fig|6666666.67506.peg.655 CDS gi|448276180|gb|CP004085.1| 755454 755858 3 + 405 hypothetical protein - none -
fig|6666666.67506.peg.656 CDS gi|448276180|gb|CP004085.1| 756004 756993 1 + 990 hypothetical protein - none -
fig|6666666.67506.peg.657 CDS gi|448276180|gb|CP004085.1| 758357 756990 -2 - 1368 hypothetical protein - none -
fig|6666666.67506.peg.658 CDS gi|448276180|gb|CP004085.1| 760136 758388 -2 - 1749 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.659 CDS gi|448276180|gb|CP004085.1| 762178 760325 -1 - 1854 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67506.peg.660 CDS gi|448276180|gb|CP004085.1| 763187 762312 -2 - 876 UPF0028 protein YchK Broadly distributed proteins not in subsystems
fig|6666666.67506.peg.661 CDS gi|448276180|gb|CP004085.1| 764121 763195 -3 - 927 Membrane protein, putative - none -
fig|6666666.67506.peg.662 CDS gi|448276180|gb|CP004085.1| 766105 764195 -1 - 1911 FIG00546417: hypothetical protein - none -
fig|6666666.67506.peg.663 CDS gi|448276180|gb|CP004085.1| 766889 766143 -2 - 747 hypothetical protein - none -
fig|6666666.67506.peg.664 CDS gi|448276180|gb|CP004085.1| 767045 768214 2 + 1170 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67506.peg.665 CDS gi|448276180|gb|CP004085.1| 768451 769641 1 + 1191 Sulfate permease Cysteine Biosynthesis
fig|6666666.67506.peg.666 CDS gi|448276180|gb|CP004085.1| 770427 769720 -3 - 708 FIG00544264: hypothetical protein - none -
fig|6666666.67506.peg.667 CDS gi|448276180|gb|CP004085.1| 770782 772692 1 + 1911 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.67506.peg.668 CDS gi|448276180|gb|CP004085.1| 772816 774648 1 + 1833 LpqW - none -
fig|6666666.67506.peg.669 CDS gi|448276180|gb|CP004085.1| 774641 775639 2 + 999 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67506.peg.670 CDS gi|448276180|gb|CP004085.1| 775654 776142 1 + 489 hypothetical membrane protein - none -
fig|6666666.67506.peg.671 CDS gi|448276180|gb|CP004085.1| 776219 776536 2 + 318 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.67506.peg.672 CDS gi|448276180|gb|CP004085.1| 776634 777776 3 + 1143 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67506.peg.673 CDS gi|448276180|gb|CP004085.1| 779321 777897 -2 - 1425 Phenylalanine-specific permease - none -
fig|6666666.67506.peg.674 CDS gi|448276180|gb|CP004085.1| 779488 780366 1 + 879 FIG00543965: hypothetical protein - none -
fig|6666666.67506.peg.675 CDS gi|448276180|gb|CP004085.1| 780381 780725 3 + 345 FIG00545506: hypothetical protein - none -
fig|6666666.67506.peg.676 CDS gi|448276180|gb|CP004085.1| 780730 782217 1 + 1488 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67506.peg.677 CDS gi|448276180|gb|CP004085.1| 782261 783130 2 + 870 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67506.peg.678 CDS gi|448276180|gb|CP004085.1| 784920 783310 -3 - 1611 levanase/invertase - none -
fig|6666666.67506.peg.679 CDS gi|448276180|gb|CP004085.1| 785715 785035 -3 - 681 FIG00945644: hypothetical protein - none -
fig|6666666.67506.peg.680 CDS gi|448276180|gb|CP004085.1| 785944 786519 1 + 576 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.67506.peg.681 CDS gi|448276180|gb|CP004085.1| 786530 787003 2 + 474 hypothetical protein - none -
fig|6666666.67506.peg.682 CDS gi|448276180|gb|CP004085.1| 787036 787602 1 + 567 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67506.peg.683 CDS gi|448276180|gb|CP004085.1| 788846 787722 -2 - 1125 Mrp protein homolog - none -
fig|6666666.67506.peg.684 CDS gi|448276180|gb|CP004085.1| 789564 788998 -3 - 567 PROBABLE MEMBRANE PROTEIN - none -
fig|6666666.67506.peg.685 CDS gi|448276180|gb|CP004085.1| 790831 789557 -1 - 1275 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.67506.peg.686 CDS gi|448276180|gb|CP004085.1| 791018 791665 2 + 648 FIG00544048: hypothetical protein - none -
fig|6666666.67506.peg.687 CDS gi|448276180|gb|CP004085.1| 795507 791809 -3 - 3699 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67506.peg.688 CDS gi|448276180|gb|CP004085.1| 799222 795626 -1 - 3597 FIG00543822: hypothetical protein - none -
fig|6666666.67506.peg.689 CDS gi|448276180|gb|CP004085.1| 799379 800203 2 + 825 FIG00547257: hypothetical protein - none -
fig|6666666.67506.peg.690 CDS gi|448276180|gb|CP004085.1| 800365 801672 1 + 1308 flavin-containing amine-oxidoreductase - none -
fig|6666666.67506.peg.691 CDS gi|448276180|gb|CP004085.1| 802577 801783 -2 - 795 Mobile element protein - none -
fig|6666666.67506.peg.692 CDS gi|448276180|gb|CP004085.1| 804652 803219 -1 - 1434 putative amino acid permease - none -
fig|6666666.67506.peg.693 CDS gi|448276180|gb|CP004085.1| 804845 807181 2 + 2337 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67506.peg.694 CDS gi|448276180|gb|CP004085.1| 807845 807360 -2 - 486 FIG00544250: hypothetical protein - none -
fig|6666666.67506.peg.695 CDS gi|448276180|gb|CP004085.1| 808450 807893 -1 - 558 FIG00544279: hypothetical protein - none -
fig|6666666.67506.peg.696 CDS gi|448276180|gb|CP004085.1| 810206 808632 -2 - 1575 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67506.peg.697 CDS gi|448276180|gb|CP004085.1| 810468 813647 3 + 3180 Helicase, SNF2/RAD54 family - none -
fig|6666666.67506.peg.698 CDS gi|448276180|gb|CP004085.1| 813644 814576 2 + 933 FIG00545674: hypothetical protein - none -
fig|6666666.67506.peg.699 CDS gi|448276180|gb|CP004085.1| 814581 815858 3 + 1278 DNA double-strand break repair protein Mre11 Rad50-Mre11 DNA repair cluster
fig|6666666.67506.peg.700 CDS gi|448276180|gb|CP004085.1| 815859 818765 3 + 2907 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.67506.peg.701 CDS gi|448276180|gb|CP004085.1| 818982 820691 3 + 1710 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67506.peg.702 CDS gi|448276180|gb|CP004085.1| 820704 822092 3 + 1389 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67506.peg.703 CDS gi|448276180|gb|CP004085.1| 822274 823614 1 + 1341 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67506.peg.704 CDS gi|448276180|gb|CP004085.1| 823620 824540 3 + 921 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67506.peg.705 CDS gi|448276180|gb|CP004085.1| 825608 824556 -2 - 1053 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67506.peg.706 CDS gi|448276180|gb|CP004085.1| 825784 826353 1 + 570 molybdenum cofactor biosynthesis protein - none -
fig|6666666.67506.peg.707 CDS gi|448276180|gb|CP004085.1| 826382 826636 2 + 255 hypothetical protein - none -
fig|6666666.67506.peg.708 CDS gi|448276180|gb|CP004085.1| 827383 826712 -1 - 672 FIG00546849: hypothetical protein - none -
fig|6666666.67506.peg.709 CDS gi|448276180|gb|CP004085.1| 828685 827396 -1 - 1290 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67506.peg.710 CDS gi|448276180|gb|CP004085.1| 829730 828687 -2 - 1044 Molybdenum cofactor biosynthesis protein MoaA ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67506.peg.711 CDS gi|448276180|gb|CP004085.1| 831532 829775 -1 - 1758 acyl-CoA synthetase - none -
fig|6666666.67506.peg.712 CDS gi|448276180|gb|CP004085.1| 832084 833805 1 + 1722 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67506.peg.713 CDS gi|448276180|gb|CP004085.1| 833868 834983 3 + 1116 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67506.peg.714 CDS gi|448276180|gb|CP004085.1| 834984 835994 3 + 1011 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.67506.peg.715 CDS gi|448276180|gb|CP004085.1| 836084 836743 2 + 660 Sua5 YciO YrdC YwlC family protein - none -
fig|6666666.67506.peg.716 CDS gi|448276180|gb|CP004085.1| 836759 837940 2 + 1182 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67506.peg.717 CDS gi|448276180|gb|CP004085.1| 837933 838445 3 + 513 ATP synthase protein I - none -
fig|6666666.67506.peg.718 CDS gi|448276180|gb|CP004085.1| 838820 839593 2 + 774 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.719 CDS gi|448276180|gb|CP004085.1| 839694 839936 3 + 243 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.720 CDS gi|448276180|gb|CP004085.1| 840084 840644 3 + 561 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.721 CDS gi|448276180|gb|CP004085.1| 840650 841468 2 + 819 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.722 CDS gi|448276180|gb|CP004085.1| 841526 843163 2 + 1638 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.723 CDS gi|448276180|gb|CP004085.1| 843228 844205 3 + 978 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.724 CDS gi|448276180|gb|CP004085.1| 844208 845656 2 + 1449 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.725 CDS gi|448276180|gb|CP004085.1| 845668 846042 1 + 375 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67506.peg.726 CDS gi|448276180|gb|CP004085.1| 846294 846725 3 + 432 FIG00544079: hypothetical protein - none -
fig|6666666.67506.peg.727 CDS gi|448276180|gb|CP004085.1| 846772 846960 1 + 189 hypothetical protein - none -
fig|6666666.67506.peg.728 CDS gi|448276180|gb|CP004085.1| 847016 847756 2 + 741 FIG00996186: hypothetical protein - none -
fig|6666666.67506.peg.729 CDS gi|448276180|gb|CP004085.1| 847837 848883 1 + 1047 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67506.peg.730 CDS gi|448276180|gb|CP004085.1| 848950 849810 1 + 861 ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.731 CDS gi|448276180|gb|CP004085.1| 849975 850775 3 + 801 FIG00996530: hypothetical protein - none -
fig|6666666.67506.peg.732 CDS gi|448276180|gb|CP004085.1| 850783 852054 1 + 1272 SAM-dependent methyltransferase - none -
fig|6666666.67506.peg.733 CDS gi|448276180|gb|CP004085.1| 852245 853033 2 + 789 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67506.peg.734 CDS gi|448276180|gb|CP004085.1| 853096 854046 1 + 951 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67506.peg.735 CDS gi|448276180|gb|CP004085.1| 854253 855632 3 + 1380 Magnesium citrate secondary transporter - none -
fig|6666666.67506.peg.736 CDS gi|448276180|gb|CP004085.1| 855663 856850 3 + 1188 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.737 CDS gi|448276180|gb|CP004085.1| 856898 858100 2 + 1203 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67506.peg.738 CDS gi|448276180|gb|CP004085.1| 858097 859155 1 + 1059 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67506.peg.739 CDS gi|448276180|gb|CP004085.1| 861290 859152 -2 - 2139 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67506.peg.740 CDS gi|448276180|gb|CP004085.1| 861353 862024 2 + 672 FIG00544413: hypothetical protein - none -
fig|6666666.67506.peg.741 CDS gi|448276180|gb|CP004085.1| 862049 863584 2 + 1536 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67506.peg.742 CDS gi|448276180|gb|CP004085.1| 864382 863711 -1 - 672 FIG00544014: hypothetical protein - none -
fig|6666666.67506.peg.743 CDS gi|448276180|gb|CP004085.1| 864486 864797 3 + 312 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67506.peg.744 CDS gi|448276180|gb|CP004085.1| 864898 866406 1 + 1509 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67506.peg.745 CDS gi|448276180|gb|CP004085.1| 866491 867168 1 + 678 putative protein with NUDIX domain - none -
fig|6666666.67506.peg.746 CDS gi|448276180|gb|CP004085.1| 867266 868711 2 + 1446 permease of the major facilitator superfamily - none -
fig|6666666.67506.peg.747 CDS gi|448276180|gb|CP004085.1| 868782 869819 3 + 1038 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67506.peg.748 CDS gi|448276180|gb|CP004085.1| 869865 871388 3 + 1524 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67506.peg.749 CDS gi|448276180|gb|CP004085.1| 871518 872810 3 + 1293 AMP-binding protein - none -
fig|6666666.67506.peg.750 CDS gi|448276180|gb|CP004085.1| 872827 873159 1 + 333 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.751 CDS gi|448276180|gb|CP004085.1| 873244 874299 1 + 1056 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67506.peg.752 CDS gi|448276180|gb|CP004085.1| 874296 875000 3 + 705 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.67506.peg.753 CDS gi|448276180|gb|CP004085.1| 875129 876073 2 + 945 periplasmic binding protein - none -
fig|6666666.67506.peg.754 CDS gi|448276180|gb|CP004085.1| 877151 876105 -2 - 1047 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67506.peg.755 CDS gi|448276180|gb|CP004085.1| 877282 877157 -1 - 126 hypothetical protein - none -
fig|6666666.67506.peg.756 CDS gi|448276180|gb|CP004085.1| 877385 878911 2 + 1527 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67506.peg.757 CDS gi|448276180|gb|CP004085.1| 881598 879013 -3 - 2586 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67506.peg.758 CDS gi|448276180|gb|CP004085.1| 883481 881604 -2 - 1878 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67506.peg.759 CDS gi|448276180|gb|CP004085.1| 884245 883580 -1 - 666 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67506.peg.760 CDS gi|448276180|gb|CP004085.1| 886010 884322 -2 - 1689 FIG00544780: hypothetical protein - none -
fig|6666666.67506.peg.761 CDS gi|448276180|gb|CP004085.1| 886364 888277 2 + 1914 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67506.peg.762 CDS gi|448276180|gb|CP004085.1| 888277 888780 1 + 504 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67506.peg.763 CDS gi|448276180|gb|CP004085.1| 888920 889933 2 + 1014 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67506.peg.764 CDS gi|448276180|gb|CP004085.1| 890018 891034 2 + 1017 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67506.peg.765 CDS gi|448276180|gb|CP004085.1| 892693 891065 -1 - 1629 hypothetical protein - none -
fig|6666666.67506.peg.766 CDS gi|448276180|gb|CP004085.1| 894362 892875 -2 - 1488 hypothetical protein - none -
fig|6666666.67506.peg.767 CDS gi|448276180|gb|CP004085.1| 895021 894359 -1 - 663 hypothetical protein - none -
fig|6666666.67506.peg.768 CDS gi|448276180|gb|CP004085.1| 895790 897382 2 + 1593 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67506.peg.769 CDS gi|448276180|gb|CP004085.1| 897790 897443 -1 - 348 Putative membrane protein - none -
fig|6666666.67506.peg.770 CDS gi|448276180|gb|CP004085.1| 899601 897949 -3 - 1653 putative integral membrane transport protein - none -
fig|6666666.67506.peg.771 CDS gi|448276180|gb|CP004085.1| 900452 899601 -2 - 852 putative ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.772 CDS gi|448276180|gb|CP004085.1| 900592 901611 1 + 1020 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67506.peg.773 CDS gi|448276180|gb|CP004085.1| 901751 903613 2 + 1863 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67506.peg.774 CDS gi|448276180|gb|CP004085.1| 903652 904371 1 + 720 DEDDh 3@1-5@1 exonuclease domain of the epsilon subunit of DNA polymerase III DNA replication strays
fig|6666666.67506.peg.775 CDS gi|448276180|gb|CP004085.1| 904428 905189 3 + 762 Oxaloacetate decarboxylase, divalent-cation-dependent (EC 4.1.1.3) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67506.peg.776 CDS gi|448276180|gb|CP004085.1| 906526 905345 -1 - 1182 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67506.peg.777 CDS gi|448276180|gb|CP004085.1| 906593 907669 2 + 1077 hypothetical protein - none -
fig|6666666.67506.peg.778 CDS gi|448276180|gb|CP004085.1| 907817 909316 2 + 1500 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67506.peg.779 CDS gi|448276180|gb|CP004085.1| 910789 909791 -1 - 999 Inner membrane protein YihY, formerly thought to be RNase BN CBSS-342610.3.peg.283;
LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.67506.peg.780 CDS gi|448276180|gb|CP004085.1| 912562 911255 -1 - 1308 POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) - none -
fig|6666666.67506.peg.781 CDS gi|448276180|gb|CP004085.1| 913767 912658 -3 - 1110 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.67506.peg.782 CDS gi|448276180|gb|CP004085.1| 915899 913905 -2 - 1995 oligopeptide transporter - none -
fig|6666666.67506.peg.783 CDS gi|448276180|gb|CP004085.1| 916710 915958 -3 - 753 Transcriptional regulator, IclR family - none -
fig|6666666.67506.peg.784 CDS gi|448276180|gb|CP004085.1| 916852 918303 1 + 1452 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67506.peg.785 CDS gi|448276180|gb|CP004085.1| 918357 918962 3 + 606 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67506.peg.786 CDS gi|448276180|gb|CP004085.1| 920089 919079 -1 - 1011 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67506.peg.787 CDS gi|448276180|gb|CP004085.1| 920216 921214 2 + 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.788 CDS gi|448276180|gb|CP004085.1| 921281 922369 2 + 1089 D-alanine--D-alanine ligase A (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67506.peg.789 CDS gi|448276180|gb|CP004085.1| 923599 922472 -1 - 1128 Putative exported protein - none -
fig|6666666.67506.peg.790 CDS gi|448276180|gb|CP004085.1| 923629 924606 1 + 978 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67506.peg.791 CDS gi|448276180|gb|CP004085.1| 924638 925273 2 + 636 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67506.peg.792 CDS gi|448276180|gb|CP004085.1| 925284 926858 3 + 1575 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.793 CDS gi|448276180|gb|CP004085.1| 926859 929087 3 + 2229 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67506.peg.794 CDS gi|448276180|gb|CP004085.1| 929160 929723 3 + 564 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.67506.peg.795 CDS gi|448276180|gb|CP004085.1| 929827 930288 1 + 462 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.67506.peg.796 CDS gi|448276180|gb|CP004085.1| 930431 930309 -2 - 123 hypothetical protein - none -
fig|6666666.67506.peg.797 CDS gi|448276180|gb|CP004085.1| 930393 931127 3 + 735 Cell division initiation protein - none -
fig|6666666.67506.peg.798 CDS gi|448276180|gb|CP004085.1| 931212 931787 3 + 576 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67506.peg.799 CDS gi|448276180|gb|CP004085.1| 931771 932508 1 + 738 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67506.peg.800 CDS gi|448276180|gb|CP004085.1| 932501 933370 2 + 870 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67506.peg.801 CDS gi|448276180|gb|CP004085.1| 933413 934945 2 + 1533 amino acid carrier protein - none -
fig|6666666.67506.peg.802 CDS gi|448276180|gb|CP004085.1| 934997 935293 2 + 297 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.803 CDS gi|448276180|gb|CP004085.1| 935345 938833 2 + 3489 Chromosome partition protein smc - none -
fig|6666666.67506.peg.804 CDS gi|448276180|gb|CP004085.1| 938913 942467 3 + 3555 No significant database matches. High content in alanine, leucine and valine amino acid residues Low G+C content (52.14%) - none -
fig|6666666.67506.peg.805 CDS gi|448276180|gb|CP004085.1| 942473 944137 2 + 1665 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67506.peg.806 CDS gi|448276180|gb|CP004085.1| 944347 945372 1 + 1026 Ammonium transporter Ammonia assimilation
fig|6666666.67506.peg.807 CDS gi|448276180|gb|CP004085.1| 945517 947112 1 + 1596 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.67506.peg.808 CDS gi|448276180|gb|CP004085.1| 948603 947173 -3 - 1431 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67506.peg.809 CDS gi|448276180|gb|CP004085.1| 948797 949933 2 + 1137 FIG00545606: hypothetical protein - none -
fig|6666666.67506.peg.810 CDS gi|448276180|gb|CP004085.1| 950173 950682 1 + 510 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.67506.peg.811 CDS gi|448276180|gb|CP004085.1| 951032 952375 2 + 1344 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67506.peg.812 CDS gi|448276180|gb|CP004085.1| 952384 952968 1 + 585 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.67506.peg.813 CDS gi|448276180|gb|CP004085.1| 952965 953300 3 + 336 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.814 CDS gi|448276180|gb|CP004085.1| 953293 953859 1 + 567 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.815 CDS gi|448276180|gb|CP004085.1| 954687 953917 -3 - 771 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67506.peg.816 CDS gi|448276180|gb|CP004085.1| 954703 955275 1 + 573 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67506.peg.817 CDS gi|448276180|gb|CP004085.1| 955390 957576 1 + 2187 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67506.peg.818 CDS gi|448276180|gb|CP004085.1| 957657 960020 3 + 2364 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67506.peg.819 CDS gi|448276180|gb|CP004085.1| 960150 960491 3 + 342 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67506.peg.820 CDS gi|448276180|gb|CP004085.1| 960631 961524 1 + 894 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67506.peg.821 CDS gi|448276180|gb|CP004085.1| 961527 962252 3 + 726 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H;
Ribonucleases in Bacillus
fig|6666666.67506.peg.822 CDS gi|448276180|gb|CP004085.1| 962249 962557 2 + 309 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67506.peg.823 CDS gi|448276180|gb|CP004085.1| 962989 963258 1 + 270 hypothetical protein - none -
fig|6666666.67506.peg.824 CDS gi|448276180|gb|CP004085.1| 963282 964874 3 + 1593 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67506.peg.825 CDS gi|448276180|gb|CP004085.1| 964871 966121 2 + 1251 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67506.peg.826 CDS gi|448276180|gb|CP004085.1| 966177 967172 3 + 996 Tyrosine recombinase XerC - none -
fig|6666666.67506.peg.827 CDS gi|448276180|gb|CP004085.1| 967818 967192 -3 - 627 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.67506.peg.828 CDS gi|448276180|gb|CP004085.1| 968349 969143 3 + 795 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.67506.peg.829 CDS gi|448276180|gb|CP004085.1| 969323 970141 2 + 819 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67506.peg.830 CDS gi|448276180|gb|CP004085.1| 970346 971041 2 + 696 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67506.peg.831 CDS gi|448276180|gb|CP004085.1| 971144 971698 2 + 555 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67506.peg.832 CDS gi|448276180|gb|CP004085.1| 971853 972755 3 + 903 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.833 CDS gi|448276180|gb|CP004085.1| 973205 972762 -2 - 444 FIG00544474: hypothetical protein - none -
fig|6666666.67506.peg.834 CDS gi|448276180|gb|CP004085.1| 973351 974451 1 + 1101 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67506.peg.835 CDS gi|448276180|gb|CP004085.1| 974616 977075 3 + 2460 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67506.peg.836 CDS gi|448276180|gb|CP004085.1| 977099 977740 2 + 642 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67506.peg.837 CDS gi|448276180|gb|CP004085.1| 977745 978716 3 + 972 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.67506.peg.838 CDS gi|448276180|gb|CP004085.1| 978716 979321 2 + 606 Putative oxidoreductase component of anaerobic dehydrogenases; Chaperone protein TorD - none -
fig|6666666.67506.peg.839 CDS gi|448276180|gb|CP004085.1| 979302 980165 3 + 864 hypothetical protein - none -
fig|6666666.67506.peg.840 CDS gi|448276180|gb|CP004085.1| 980727 980341 -3 - 387 hypothetical membrane protein - none -
fig|6666666.67506.peg.841 CDS gi|448276180|gb|CP004085.1| 980863 982050 1 + 1188 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67506.peg.842 CDS gi|448276180|gb|CP004085.1| 982035 983438 3 + 1404 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.67506.peg.843 CDS gi|448276180|gb|CP004085.1| 983565 984725 3 + 1161 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67506.peg.844 CDS gi|448276180|gb|CP004085.1| 985570 984797 -1 - 774 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.67506.peg.845 CDS gi|448276180|gb|CP004085.1| 986694 985687 -3 - 1008 ABC-type transporter, permease component - none -
fig|6666666.67506.peg.846 CDS gi|448276180|gb|CP004085.1| 986810 988153 2 + 1344 two-component system, sensor protein - none -
fig|6666666.67506.peg.847 CDS gi|448276180|gb|CP004085.1| 988150 988854 1 + 705 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.848 CDS gi|448276180|gb|CP004085.1| 988936 990885 1 + 1950 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.849 CDS gi|448276180|gb|CP004085.1| 990925 991791 1 + 867 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67506.peg.850 CDS gi|448276180|gb|CP004085.1| 993353 991926 -2 - 1428 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67506.peg.851 CDS gi|448276180|gb|CP004085.1| 994552 993410 -1 - 1143 hypothetical protein - none -
fig|6666666.67506.peg.852 CDS gi|448276180|gb|CP004085.1| 994715 994563 -2 - 153 hypothetical protein - none -
fig|6666666.67506.peg.853 CDS gi|448276180|gb|CP004085.1| 994695 996182 3 + 1488 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67506.peg.854 CDS gi|448276180|gb|CP004085.1| 996289 997332 1 + 1044 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.855 CDS gi|448276180|gb|CP004085.1| 998286 997372 -3 - 915 UPF0246 protein YaaA - none -
fig|6666666.67506.peg.856 CDS gi|448276180|gb|CP004085.1| 998343 1000121 3 + 1779 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.67506.peg.857 CDS gi|448276180|gb|CP004085.1| 1001313 1000210 -3 - 1104 FIG00544866: hypothetical protein - none -
fig|6666666.67506.peg.858 CDS gi|448276180|gb|CP004085.1| 1001402 1002043 2 + 642 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67506.peg.859 CDS gi|448276180|gb|CP004085.1| 1002071 1003069 2 + 999 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67506.peg.860 CDS gi|448276180|gb|CP004085.1| 1003173 1003310 3 + 138 hypothetical protein - none -
fig|6666666.67506.peg.861 CDS gi|448276180|gb|CP004085.1| 1003578 1003450 -3 - 129 hypothetical protein - none -
fig|6666666.67506.peg.862 CDS gi|448276180|gb|CP004085.1| 1003863 1006655 3 + 2793 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.67506.peg.863 CDS gi|448276180|gb|CP004085.1| 1006805 1007236 2 + 432 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67506.peg.864 CDS gi|448276180|gb|CP004085.1| 1007326 1008696 1 + 1371 putative DNA-damage-inducible protein F - none -
fig|6666666.67506.peg.865 CDS gi|448276180|gb|CP004085.1| 1008849 1009808 3 + 960 putative SimX4 homolog - none -
fig|6666666.67506.peg.866 CDS gi|448276180|gb|CP004085.1| 1009812 1010558 3 + 747 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.67506.peg.867 CDS gi|448276180|gb|CP004085.1| 1011565 1010555 -1 - 1011 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.67506.peg.868 CDS gi|448276180|gb|CP004085.1| 1011650 1012585 2 + 936 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67506.peg.869 CDS gi|448276180|gb|CP004085.1| 1012682 1012951 2 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.67506.peg.870 CDS gi|448276180|gb|CP004085.1| 1013161 1015434 1 + 2274 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.67506.peg.871 CDS gi|448276180|gb|CP004085.1| 1015574 1016320 2 + 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67506.peg.872 CDS gi|448276180|gb|CP004085.1| 1016343 1017107 3 + 765 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67506.peg.873 CDS gi|448276180|gb|CP004085.1| 1017215 1018117 2 + 903 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67506.peg.874 CDS gi|448276180|gb|CP004085.1| 1018127 1020349 2 + 2223 Ribonuclease J2 (endoribonuclease in RNA processing) Ribonucleases in Bacillus
fig|6666666.67506.peg.875 CDS gi|448276180|gb|CP004085.1| 1020675 1023860 3 + 3186 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67506.peg.876 CDS gi|448276180|gb|CP004085.1| 1024104 1025219 3 + 1116 Integral membrane protein TerC - none -
fig|6666666.67506.peg.877 CDS gi|448276180|gb|CP004085.1| 1025230 1025844 1 + 615 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.878 CDS gi|448276180|gb|CP004085.1| 1025866 1026402 1 + 537 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67506.peg.879 CDS gi|448276180|gb|CP004085.1| 1026425 1026865 2 + 441 putative transcription regulator - none -
fig|6666666.67506.peg.880 CDS gi|448276180|gb|CP004085.1| 1026973 1027839 1 + 867 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67506.peg.881 CDS gi|448276180|gb|CP004085.1| 1028405 1027860 -2 - 546 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67506.peg.882 CDS gi|448276180|gb|CP004085.1| 1029190 1028483 -1 - 708 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67506.peg.883 CDS gi|448276180|gb|CP004085.1| 1029808 1029206 -1 - 603 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67506.peg.884 CDS gi|448276180|gb|CP004085.1| 1029882 1030088 3 + 207 FIG00545605: hypothetical protein - none -
fig|6666666.67506.peg.885 CDS gi|448276180|gb|CP004085.1| 1030498 1031613 1 + 1116 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67506.peg.886 CDS gi|448276180|gb|CP004085.1| 1031649 1032263 3 + 615 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67506.peg.887 CDS gi|448276180|gb|CP004085.1| 1032344 1033897 2 + 1554 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA processing
fig|6666666.67506.peg.888 CDS gi|448276180|gb|CP004085.1| 1033890 1034645 3 + 756 FIG00544570: hypothetical protein - none -
fig|6666666.67506.peg.889 CDS gi|448276180|gb|CP004085.1| 1036095 1034713 -3 - 1383 ATPase involved in DNA repair - none -
fig|6666666.67506.peg.890 CDS gi|448276180|gb|CP004085.1| 1036291 1037229 1 + 939 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA processing
fig|6666666.67506.peg.891 CDS gi|448276180|gb|CP004085.1| 1038050 1037226 -2 - 825 FIG00546075: hypothetical protein - none -
fig|6666666.67506.peg.892 CDS gi|448276180|gb|CP004085.1| 1038229 1039749 1 + 1521 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.67506.peg.893 CDS gi|448276180|gb|CP004085.1| 1039813 1041192 1 + 1380 xanthine/uracil permeases - none -
fig|6666666.67506.peg.894 CDS gi|448276180|gb|CP004085.1| 1042136 1041336 -2 - 801 Transcriptional repressor of the fructose operon, DeoR family - none -
fig|6666666.67506.peg.895 CDS gi|448276180|gb|CP004085.1| 1042919 1042170 -2 - 750 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67506.peg.896 CDS gi|448276180|gb|CP004085.1| 1043532 1043705 3 + 174 hypothetical protein - none -
fig|6666666.67506.peg.897 CDS gi|448276180|gb|CP004085.1| 1043873 1044307 2 + 435 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67506.peg.898 CDS gi|448276180|gb|CP004085.1| 1048474 1044362 -1 - 4113 ATP-dependent helicase HrpA - none -
fig|6666666.67506.peg.899 CDS gi|448276180|gb|CP004085.1| 1048605 1049573 3 + 969 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67506.peg.900 CDS gi|448276180|gb|CP004085.1| 1052115 1049557 -3 - 2559 putative helicase - none -
fig|6666666.67506.peg.901 CDS gi|448276180|gb|CP004085.1| 1053107 1052115 -2 - 993 FIG00544614: hypothetical protein - none -
fig|6666666.67506.peg.902 CDS gi|448276180|gb|CP004085.1| 1053554 1054678 2 + 1125 hypothetical protein - none -
fig|6666666.67506.peg.903 CDS gi|448276180|gb|CP004085.1| 1055691 1054675 -3 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.67506.peg.904 CDS gi|448276180|gb|CP004085.1| 1056446 1055754 -2 - 693 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.905 CDS gi|448276180|gb|CP004085.1| 1057588 1056566 -1 - 1023 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67506.peg.906 CDS gi|448276180|gb|CP004085.1| 1058230 1057763 -1 - 468 D-tyrosyl-tRNA(Tyr) deacylase CBSS-342610.3.peg.283;
D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67506.peg.907 CDS gi|448276180|gb|CP004085.1| 1059959 1058241 -2 - 1719 Putative transferase - none -
fig|6666666.67506.peg.908 CDS gi|448276180|gb|CP004085.1| 1060441 1060088 -1 - 354 FIG00545207: hypothetical protein - none -
fig|6666666.67506.peg.909 CDS gi|448276180|gb|CP004085.1| 1060619 1060861 2 + 243 FIG00544358: hypothetical protein - none -
fig|6666666.67506.peg.910 CDS gi|448276180|gb|CP004085.1| 1060874 1062610 2 + 1737 DNA or RNA helicases of superfamily II - none -
fig|6666666.67506.peg.911 CDS gi|448276180|gb|CP004085.1| 1062759 1063049 3 + 291 FIG00548452: hypothetical protein - none -
fig|6666666.67506.peg.912 CDS gi|448276180|gb|CP004085.1| 1064824 1063187 -1 - 1638 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.67506.peg.913 CDS gi|448276180|gb|CP004085.1| 1066082 1065177 -2 - 906 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67506.peg.914 CDS gi|448276180|gb|CP004085.1| 1066121 1067128 2 + 1008 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67506.peg.915 CDS gi|448276180|gb|CP004085.1| 1067314 1067613 1 + 300 FIG00545109: hypothetical protein - none -
fig|6666666.67506.peg.916 CDS gi|448276180|gb|CP004085.1| 1068137 1067679 -2 - 459 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67506.peg.917 CDS gi|448276180|gb|CP004085.1| 1068437 1068874 2 + 438 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67506.peg.918 CDS gi|448276180|gb|CP004085.1| 1069123 1069737 1 + 615 FIG00545882: hypothetical protein - none -
fig|6666666.67506.peg.919 CDS gi|448276180|gb|CP004085.1| 1069730 1070980 2 + 1251 FIG00431633: hypothetical protein - none -
fig|6666666.67506.peg.920 CDS gi|448276180|gb|CP004085.1| 1071051 1072940 3 + 1890 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67506.peg.921 CDS gi|448276180|gb|CP004085.1| 1073220 1074179 3 + 960 Iron compound ABC uptake transporter substrate-binding protein PiuA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.922 CDS gi|448276180|gb|CP004085.1| 1074267 1075412 3 + 1146 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67506.peg.923 CDS gi|448276180|gb|CP004085.1| 1075504 1076433 1 + 930 Iron compound ABC uptake transporter permease protein PiuC Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.924 CDS gi|448276180|gb|CP004085.1| 1076430 1077185 3 + 756 Iron compound ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.925 CDS gi|448276180|gb|CP004085.1| 1077977 1077300 -2 - 678 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67506.peg.926 CDS gi|448276180|gb|CP004085.1| 1078094 1079206 2 + 1113 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.927 CDS gi|448276180|gb|CP004085.1| 1079203 1080606 1 + 1404 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.928 CDS gi|448276180|gb|CP004085.1| 1081122 1080712 -3 - 411 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67506.peg.929 CDS gi|448276180|gb|CP004085.1| 1082399 1081134 -2 - 1266 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67506.peg.930 CDS gi|448276180|gb|CP004085.1| 1084053 1083844 -3 - 210 Mobile element protein - none -
fig|6666666.67506.peg.931 CDS gi|448276180|gb|CP004085.1| 1085083 1085643 1 + 561 FIG00543909: hypothetical protein - none -
fig|6666666.67506.peg.932 CDS gi|448276180|gb|CP004085.1| 1085720 1086022 2 + 303 hypothetical protein - none -
fig|6666666.67506.peg.933 CDS gi|448276180|gb|CP004085.1| 1086153 1086710 3 + 558 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67506.peg.934 CDS gi|448276180|gb|CP004085.1| 1086946 1088163 1 + 1218 Dyp-type peroxidase family protein - none -
fig|6666666.67506.peg.935 CDS gi|448276180|gb|CP004085.1| 1088233 1090293 1 + 2061 Threonyl-tRNA synthetase (EC 6.1.1.3) CBSS-1806.1.peg.1285;
tRNA aminoacylation, Thr
fig|6666666.67506.peg.936 CDS gi|448276180|gb|CP004085.1| 1090466 1091035 2 + 570 FIG049476: HIT family protein CBSS-1806.1.peg.1285
fig|6666666.67506.peg.937 CDS gi|448276180|gb|CP004085.1| 1091100 1091744 3 + 645 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-1806.1.peg.1285;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.938 CDS gi|448276180|gb|CP004085.1| 1091748 1092689 3 + 942 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) CBSS-1806.1.peg.1285
fig|6666666.67506.peg.939 CDS gi|448276180|gb|CP004085.1| 1092686 1093879 2 + 1194 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) CBSS-1806.1.peg.1285
fig|6666666.67506.peg.940 CDS gi|448276180|gb|CP004085.1| 1093876 1094355 1 + 480 FIG053954: Probable conserved membrane protein CBSS-1806.1.peg.1285
fig|6666666.67506.peg.941 CDS gi|448276180|gb|CP004085.1| 1094537 1095457 2 + 921 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) CBSS-1806.1.peg.1285;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67506.peg.942 CDS gi|448276180|gb|CP004085.1| 1095464 1096348 2 + 885 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II;
CBSS-1806.1.peg.1285
fig|6666666.67506.peg.943 CDS gi|448276180|gb|CP004085.1| 1096604 1097359 2 + 756 FIG000859: hypothetical protein YebC CBSS-1806.1.peg.1285;
Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.67506.peg.944 CDS gi|448276180|gb|CP004085.1| 1097612 1098115 2 + 504 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67506.peg.945 CDS gi|448276180|gb|CP004085.1| 1098158 1098778 2 + 621 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67506.peg.946 CDS gi|448276180|gb|CP004085.1| 1098844 1099947 1 + 1104 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67506.peg.947 CDS gi|448276180|gb|CP004085.1| 1100071 1100463 1 + 393 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.67506.peg.948 CDS gi|448276180|gb|CP004085.1| 1100629 1102470 1 + 1842 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67506.peg.949 CDS gi|448276180|gb|CP004085.1| 1102467 1103678 3 + 1212 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67506.peg.950 CDS gi|448276180|gb|CP004085.1| 1103818 1105362 1 + 1545 dipeptide-binding protein DciAE - none -
fig|6666666.67506.peg.951 CDS gi|448276180|gb|CP004085.1| 1105380 1105967 3 + 588 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67506.peg.952 CDS gi|448276180|gb|CP004085.1| 1105960 1108236 1 + 2277 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67506.peg.953 CDS gi|448276180|gb|CP004085.1| 1109186 1108326 -2 - 861 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.954 CDS gi|448276180|gb|CP004085.1| 1109331 1110035 3 + 705 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67506.peg.955 CDS gi|448276180|gb|CP004085.1| 1110076 1111359 1 + 1284 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67506.peg.956 CDS gi|448276180|gb|CP004085.1| 1112433 1111498 -3 - 936 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67506.peg.957 CDS gi|448276180|gb|CP004085.1| 1112529 1114349 3 + 1821 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67506.peg.958 CDS gi|448276180|gb|CP004085.1| 1114423 1115682 1 + 1260 FIG00544116: hypothetical protein - none -
fig|6666666.67506.peg.959 CDS gi|448276180|gb|CP004085.1| 1115795 1117075 2 + 1281 ATPase, AAA family - none -
fig|6666666.67506.peg.960 CDS gi|448276180|gb|CP004085.1| 1117183 1119849 1 + 2667 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67506.peg.961 CDS gi|448276180|gb|CP004085.1| 1119870 1120364 3 + 495 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.67506.peg.962 CDS gi|448276180|gb|CP004085.1| 1120512 1121666 3 + 1155 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67506.peg.963 CDS gi|448276180|gb|CP004085.1| 1121695 1122657 1 + 963 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67506.peg.964 CDS gi|448276180|gb|CP004085.1| 1123082 1123231 2 + 150 hypothetical protein - none -
fig|6666666.67506.peg.965 CDS gi|448276180|gb|CP004085.1| 1123591 1124430 1 + 840 NADH:flavin oxidoreductase/NADH oxidase - none -
fig|6666666.67506.peg.966 CDS gi|448276180|gb|CP004085.1| 1124708 1125910 2 + 1203 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67506.peg.967 CDS gi|448276180|gb|CP004085.1| 1126047 1126511 3 + 465 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67506.peg.968 CDS gi|448276180|gb|CP004085.1| 1126600 1127709 1 + 1110 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67506.peg.969 CDS gi|448276180|gb|CP004085.1| 1127706 1128158 3 + 453 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67506.peg.970 CDS gi|448276180|gb|CP004085.1| 1128300 1129385 3 + 1086 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67506.peg.971 CDS gi|448276180|gb|CP004085.1| 1129477 1130040 1 + 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67506.peg.972 CDS gi|448276180|gb|CP004085.1| 1130066 1130812 2 + 747 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67506.peg.973 CDS gi|448276180|gb|CP004085.1| 1130988 1131623 3 + 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.67506.peg.974 CDS gi|448276180|gb|CP004085.1| 1131623 1132567 2 + 945 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67506.peg.975 CDS gi|448276180|gb|CP004085.1| 1132592 1133959 2 + 1368 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67506.peg.976 CDS gi|448276180|gb|CP004085.1| 1134020 1135174 2 + 1155 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67506.peg.977 CDS gi|448276180|gb|CP004085.1| 1135242 1138574 3 + 3333 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.67506.peg.978 CDS gi|448276180|gb|CP004085.1| 1138574 1139422 2 + 849 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67506.peg.979 CDS gi|448276180|gb|CP004085.1| 1139625 1139951 3 + 327 integration host factor - none -
fig|6666666.67506.peg.980 CDS gi|448276180|gb|CP004085.1| 1139982 1140530 3 + 549 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67506.peg.981 CDS gi|448276180|gb|CP004085.1| 1140704 1140985 2 + 282 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67506.peg.982 CDS gi|448276180|gb|CP004085.1| 1141004 1142284 2 + 1281 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67506.peg.983 CDS gi|448276180|gb|CP004085.1| 1142405 1143610 2 + 1206 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis
fig|6666666.67506.peg.984 CDS gi|448276180|gb|CP004085.1| 1143773 1145818 2 + 2046 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67506.peg.985 CDS gi|448276180|gb|CP004085.1| 1145828 1146328 2 + 501 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67506.peg.986 CDS gi|448276180|gb|CP004085.1| 1146329 1147318 2 + 990 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67506.peg.987 CDS gi|448276180|gb|CP004085.1| 1147315 1148856 1 + 1542 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) RNA methylation
fig|6666666.67506.peg.988 CDS gi|448276180|gb|CP004085.1| 1148862 1149557 3 + 696 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67506.peg.989 CDS gi|448276180|gb|CP004085.1| 1149643 1150659 1 + 1017 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67506.peg.990 CDS gi|448276180|gb|CP004085.1| 1150728 1151318 3 + 591 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67506.peg.991 CDS gi|448276180|gb|CP004085.1| 1151408 1152676 2 + 1269 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67506.peg.992 CDS gi|448276180|gb|CP004085.1| 1152678 1153160 3 + 483 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.67506.peg.993 CDS gi|448276180|gb|CP004085.1| 1153224 1153688 3 + 465 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67506.peg.994 CDS gi|448276180|gb|CP004085.1| 1153692 1155782 3 + 2091 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67506.peg.995 CDS gi|448276180|gb|CP004085.1| 1155788 1156672 2 + 885 hypothetical protein - none -
fig|6666666.67506.peg.996 CDS gi|448276180|gb|CP004085.1| 1156760 1157797 2 + 1038 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.67506.peg.997 CDS gi|448276180|gb|CP004085.1| 1157863 1158849 1 + 987 FIG001886: Cytoplasmic hypothetical protein - none -
fig|6666666.67506.peg.998 CDS gi|448276180|gb|CP004085.1| 1158970 1160007 1 + 1038 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67506.peg.999 CDS gi|448276180|gb|CP004085.1| 1160118 1161326 3 + 1209 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67506.peg.1000 CDS gi|448276180|gb|CP004085.1| 1161424 1162215 1 + 792 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67506.peg.1001 CDS gi|448276180|gb|CP004085.1| 1162335 1162568 3 + 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67506.peg.1002 CDS gi|448276180|gb|CP004085.1| 1163567 1162698 -2 - 870 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67506.peg.1003 CDS gi|448276180|gb|CP004085.1| 1164625 1163612 -1 - 1014 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67506.peg.1004 CDS gi|448276180|gb|CP004085.1| 1166205 1164670 -3 - 1536 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67506.peg.1005 CDS gi|448276180|gb|CP004085.1| 1167364 1166252 -1 - 1113 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.67506.peg.1006 CDS gi|448276180|gb|CP004085.1| 1169556 1167466 -3 - 2091 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67506.peg.1007 CDS gi|448276180|gb|CP004085.1| 1169853 1170791 3 + 939 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67506.peg.1008 CDS gi|448276180|gb|CP004085.1| 1170885 1171223 3 + 339 hypothetical protein - none -
fig|6666666.67506.peg.1009 CDS gi|448276180|gb|CP004085.1| 1172465 1171392 -2 - 1074 Cytochrome oxidase assembly protein - none -
fig|6666666.67506.peg.1010 CDS gi|448276180|gb|CP004085.1| 1173431 1172631 -2 - 801 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67506.peg.1011 CDS gi|448276180|gb|CP004085.1| 1174567 1173536 -1 - 1032 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67506.peg.1012 CDS gi|448276180|gb|CP004085.1| 1176272 1174611 -2 - 1662 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67506.peg.1013 CDS gi|448276180|gb|CP004085.1| 1176469 1177140 1 + 672 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.1014 CDS gi|448276180|gb|CP004085.1| 1177148 1178578 2 + 1431 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.1015 CDS gi|448276180|gb|CP004085.1| 1178584 1179801 1 + 1218 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.1016 CDS gi|448276180|gb|CP004085.1| 1179846 1180607 3 + 762 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.1017 CDS gi|448276180|gb|CP004085.1| 1180715 1181962 2 + 1248 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.1018 CDS gi|448276180|gb|CP004085.1| 1182080 1182541 2 + 462 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67506.peg.1019 CDS gi|448276180|gb|CP004085.1| 1182615 1183019 3 + 405 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67506.peg.1020 CDS gi|448276180|gb|CP004085.1| 1184308 1183016 -1 - 1293 hypothetical protein - none -
fig|6666666.67506.peg.1021 CDS gi|448276180|gb|CP004085.1| 1184383 1185984 1 + 1602 ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.1022 CDS gi|448276180|gb|CP004085.1| 1186735 1186040 -1 - 696 hypothetical protein - none -
fig|6666666.67506.peg.1023 CDS gi|448276180|gb|CP004085.1| 1188357 1186993 -3 - 1365 FIG00848225: hypothetical protein - none -
fig|6666666.67506.peg.1024 CDS gi|448276180|gb|CP004085.1| 1188638 1188369 -2 - 270 ACT domain protein - none -
fig|6666666.67506.peg.1025 CDS gi|448276180|gb|CP004085.1| 1188686 1189351 2 + 666 FIG00545571: hypothetical protein - none -
fig|6666666.67506.peg.1026 CDS gi|448276180|gb|CP004085.1| 1189915 1189361 -1 - 555 Transcriptional regulator, TetR family - none -
fig|6666666.67506.peg.1027 CDS gi|448276180|gb|CP004085.1| 1192853 1190043 -2 - 2811 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Glyoxylate bypass;
Methylcitrate cycle;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67506.peg.1028 CDS gi|448276180|gb|CP004085.1| 1193132 1193743 2 + 612 hypothetical protein - none -
fig|6666666.67506.peg.1029 CDS gi|448276180|gb|CP004085.1| 1194320 1196281 2 + 1962 cell wall-associated hydrolase - none -
fig|6666666.67506.peg.1030 CDS gi|448276180|gb|CP004085.1| 1197202 1196339 -1 - 864 hypothetical protein - none -
fig|6666666.67506.peg.1031 CDS gi|448276180|gb|CP004085.1| 1197228 1198067 3 + 840 FIG00544636: hypothetical protein - none -
fig|6666666.67506.peg.1032 CDS gi|448276180|gb|CP004085.1| 1198811 1198161 -2 - 651 FIG00545282: hypothetical protein - none -
fig|6666666.67506.peg.1033 CDS gi|448276180|gb|CP004085.1| 1199619 1198921 -3 - 699 DedA family protein paralog - none -
fig|6666666.67506.peg.1034 CDS gi|448276180|gb|CP004085.1| 1199942 1200505 2 + 564 Phospholipid-binding protein - none -
fig|6666666.67506.peg.1035 CDS gi|448276180|gb|CP004085.1| 1201667 1200540 -2 - 1128 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67506.peg.1036 CDS gi|448276180|gb|CP004085.1| 1202919 1201723 -3 - 1197 FIG00545923: hypothetical protein - none -
fig|6666666.67506.peg.1037 CDS gi|448276180|gb|CP004085.1| 1202984 1203811 2 + 828 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67506.peg.1038 CDS gi|448276180|gb|CP004085.1| 1203899 1205140 2 + 1242 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67506.peg.1039 CDS gi|448276180|gb|CP004085.1| 1205154 1205564 3 + 411 FIG00543988: hypothetical protein - none -
fig|6666666.67506.peg.1040 CDS gi|448276180|gb|CP004085.1| 1205675 1205947 2 + 273 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67506.peg.1041 CDS gi|448276180|gb|CP004085.1| 1206044 1206958 2 + 915 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67506.peg.1042 CDS gi|448276180|gb|CP004085.1| 1207202 1208734 2 + 1533 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67506.peg.1043 CDS gi|448276180|gb|CP004085.1| 1209565 1208738 -1 - 828 RecB family exonuclease - none -
fig|6666666.67506.peg.1044 CDS gi|448276180|gb|CP004085.1| 1210287 1209637 -3 - 651 hypothetical protein - none -
fig|6666666.67506.peg.1045 CDS gi|448276180|gb|CP004085.1| 1210350 1211183 3 + 834 RNA methyltransferase - none -
fig|6666666.67506.peg.1046 CDS gi|448276180|gb|CP004085.1| 1211284 1212900 1 + 1617 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67506.peg.1047 CDS gi|448276180|gb|CP004085.1| 1212953 1214542 2 + 1590 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67506.peg.1048 CDS gi|448276180|gb|CP004085.1| 1214608 1214805 1 + 198 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67506.peg.1049 CDS gi|448276180|gb|CP004085.1| 1214802 1216316 3 + 1515 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67506.peg.1050 CDS gi|448276180|gb|CP004085.1| 1216323 1218629 3 + 2307 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67506.peg.1051 CDS gi|448276180|gb|CP004085.1| 1218673 1218921 1 + 249 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67506.peg.1052 CDS gi|448276180|gb|CP004085.1| 1219057 1219998 1 + 942 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67506.peg.1053 CDS gi|448276180|gb|CP004085.1| 1220104 1222839 1 + 2736 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67506.peg.1054 CDS gi|448276180|gb|CP004085.1| 1222832 1223566 2 + 735 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67506.peg.1055 CDS gi|448276180|gb|CP004085.1| 1223686 1224171 1 + 486 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67506.peg.1056 CDS gi|448276180|gb|CP004085.1| 1224514 1225731 1 + 1218 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67506.peg.1057 CDS gi|448276180|gb|CP004085.1| 1225744 1226541 1 + 798 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67506.peg.1058 CDS gi|448276180|gb|CP004085.1| 1226963 1226625 -2 - 339 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67506.peg.1059 CDS gi|448276180|gb|CP004085.1| 1227283 1227522 1 + 240 FIG00546737: hypothetical protein - none -
fig|6666666.67506.peg.1060 CDS gi|448276180|gb|CP004085.1| 1227539 1228234 2 + 696 Putative secreted protein - none -
fig|6666666.67506.peg.1061 CDS gi|448276180|gb|CP004085.1| 1228288 1228467 1 + 180 FIG00549272: hypothetical protein - none -
fig|6666666.67506.peg.1062 CDS gi|448276180|gb|CP004085.1| 1228469 1229851 2 + 1383 Magnesium transporter - none -
fig|6666666.67506.peg.1063 CDS gi|448276180|gb|CP004085.1| 1230594 1229905 -3 - 690 Trk system potassium uptake protein TrkA Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.67506.peg.1064 CDS gi|448276180|gb|CP004085.1| 1231903 1230587 -1 - 1317 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.67506.peg.1065 CDS gi|448276180|gb|CP004085.1| 1233545 1232169 -2 - 1377 hypothetical protein - none -
fig|6666666.67506.peg.1066 CDS gi|448276180|gb|CP004085.1| 1235089 1233707 -1 - 1383 putative amidase - none -
fig|6666666.67506.peg.1067 CDS gi|448276180|gb|CP004085.1| 1236907 1235201 -1 - 1707 Fumarate/succinate/L-aspartate dehydrogenases - none -
fig|6666666.67506.peg.1068 CDS gi|448276180|gb|CP004085.1| 1238421 1237057 -3 - 1365 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67506.peg.1069 CDS gi|448276180|gb|CP004085.1| 1238684 1238571 -2 - 114 hypothetical protein - none -
fig|6666666.67506.peg.1070 CDS gi|448276180|gb|CP004085.1| 1238694 1240124 3 + 1431 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67506.peg.1071 CDS gi|448276180|gb|CP004085.1| 1240692 1240216 -3 - 477 FIG00544657: hypothetical protein - none -
fig|6666666.67506.peg.1072 CDS gi|448276180|gb|CP004085.1| 1240736 1242235 2 + 1500 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67506.peg.1073 CDS gi|448276180|gb|CP004085.1| 1242362 1243528 2 + 1167 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67506.peg.1074 CDS gi|448276180|gb|CP004085.1| 1243611 1245008 3 + 1398 FIG01282800: hypothetical protein - none -
fig|6666666.67506.peg.1075 CDS gi|448276180|gb|CP004085.1| 1245008 1246042 2 + 1035 FIG00546228: hypothetical protein - none -
fig|6666666.67506.peg.1076 CDS gi|448276180|gb|CP004085.1| 1246089 1247036 3 + 948 FIG00545058: hypothetical protein - none -
fig|6666666.67506.peg.1077 CDS gi|448276180|gb|CP004085.1| 1247101 1248342 1 + 1242 hypothetical protein - none -
fig|6666666.67506.peg.1078 CDS gi|448276180|gb|CP004085.1| 1248999 1248466 -3 - 534 FIG00544641: hypothetical protein - none -
fig|6666666.67506.peg.1079 CDS gi|448276180|gb|CP004085.1| 1249998 1249255 -3 - 744 FIG00545122: hypothetical protein - none -
fig|6666666.67506.peg.1080 CDS gi|448276180|gb|CP004085.1| 1250438 1250004 -2 - 435 FIG00672531: hypothetical protein - none -
fig|6666666.67506.peg.1081 CDS gi|448276180|gb|CP004085.1| 1252856 1250535 -2 - 2322 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67506.peg.1082 CDS gi|448276180|gb|CP004085.1| 1252857 1252994 3 + 138 hypothetical protein - none -
fig|6666666.67506.peg.1083 CDS gi|448276180|gb|CP004085.1| 1252991 1253488 2 + 498 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.67506.peg.1084 CDS gi|448276180|gb|CP004085.1| 1256831 1253694 -2 - 3138 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.1085 CDS gi|448276180|gb|CP004085.1| 1258017 1256824 -3 - 1194 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.1086 CDS gi|448276180|gb|CP004085.1| 1259948 1258014 -2 - 1935 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.1087 CDS gi|448276180|gb|CP004085.1| 1259982 1260179 3 + 198 hypothetical protein - none -
fig|6666666.67506.peg.1088 CDS gi|448276180|gb|CP004085.1| 1261208 1262134 2 + 927 ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.1089 CDS gi|448276180|gb|CP004085.1| 1262139 1262447 3 + 309 putative membrane protein [KO:K01992] - none -
fig|6666666.67506.peg.1090 CDS gi|448276180|gb|CP004085.1| 1262496 1263101 3 + 606 putative two-component system response regulator - none -
fig|6666666.67506.peg.1091 CDS gi|448276180|gb|CP004085.1| 1263778 1263170 -1 - 609 hypothetical protein - none -
fig|6666666.67506.peg.1092 CDS gi|448276180|gb|CP004085.1| 1263884 1265482 2 + 1599 Glutathione-regulated potassium-efflux system protein KefC Potassium homeostasis
fig|6666666.67506.peg.1093 CDS gi|448276180|gb|CP004085.1| 1266464 1265496 -2 - 969 membrane associated protein - none -
fig|6666666.67506.peg.1094 CDS gi|448276180|gb|CP004085.1| 1266513 1268285 3 + 1773 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67506.peg.1095 CDS gi|448276180|gb|CP004085.1| 1268425 1269039 1 + 615 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67506.peg.1096 CDS gi|448276180|gb|CP004085.1| 1271401 1269059 -1 - 2343 Cytidylate kinase (EC 2.7.4.14) / GTP-binding protein EngA Universal GTPases
fig|6666666.67506.peg.1097 CDS gi|448276180|gb|CP004085.1| 1272307 1271432 -1 - 876 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67506.peg.1098 CDS gi|448276180|gb|CP004085.1| 1272954 1272358 -3 - 597 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67506.peg.1099 CDS gi|448276180|gb|CP004085.1| 1273811 1273005 -2 - 807 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67506.peg.1100 CDS gi|448276180|gb|CP004085.1| 1274739 1273858 -3 - 882 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67506.peg.1101 CDS gi|448276180|gb|CP004085.1| 1275837 1274926 -3 - 912 Tyrosine recombinase XerD - none -
fig|6666666.67506.peg.1102 CDS gi|448276180|gb|CP004085.1| 1276854 1275853 -3 - 1002 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67506.peg.1103 CDS gi|448276180|gb|CP004085.1| 1278046 1276865 -1 - 1182 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67506.peg.1104 CDS gi|448276180|gb|CP004085.1| 1279776 1278100 -3 - 1677 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67506.peg.1105 CDS gi|448276180|gb|CP004085.1| 1280801 1279836 -2 - 966 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67506.peg.1106 CDS gi|448276180|gb|CP004085.1| 1281631 1280798 -1 - 834 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67506.peg.1107 CDS gi|448276180|gb|CP004085.1| 1281885 1281718 -3 - 168 FIG00547677: hypothetical protein - none -
fig|6666666.67506.peg.1108 CDS gi|448276180|gb|CP004085.1| 1282973 1281948 -2 - 1026 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67506.peg.1109 CDS gi|448276180|gb|CP004085.1| 1284124 1282976 -1 - 1149 TPR-repeat-containing protein - none -
fig|6666666.67506.peg.1110 CDS gi|448276180|gb|CP004085.1| 1291820 1290510 -2 - 1311 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67506.peg.1111 CDS gi|448276180|gb|CP004085.1| 1292035 1291853 -1 - 183 UPF0434 protein YcaR - none -
fig|6666666.67506.peg.1112 CDS gi|448276180|gb|CP004085.1| 1292352 1292074 -3 - 279 hypothetical protein - none -
fig|6666666.67506.peg.1113 CDS gi|448276180|gb|CP004085.1| 1292311 1294131 1 + 1821 Thiamin biosynthesis protein ThiC Thiamin biosynthesis
fig|6666666.67506.peg.1114 CDS gi|448276180|gb|CP004085.1| 1294115 1294873 2 + 759 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67506.peg.1115 CDS gi|448276180|gb|CP004085.1| 1294976 1296049 2 + 1074 FIG00548735: hypothetical protein - none -
fig|6666666.67506.peg.1116 CDS gi|448276180|gb|CP004085.1| 1296162 1297382 3 + 1221 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.67506.peg.1117 CDS gi|448276180|gb|CP004085.1| 1297456 1297662 1 + 207 thiamin biosynthesis ThiS - none -
fig|6666666.67506.peg.1118 CDS gi|448276180|gb|CP004085.1| 1297755 1298591 3 + 837 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67506.peg.1119 CDS gi|448276180|gb|CP004085.1| 1298594 1299871 2 + 1278 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67506.peg.1120 CDS gi|448276180|gb|CP004085.1| 1301357 1299891 -2 - 1467 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67506.peg.1121 CDS gi|448276180|gb|CP004085.1| 1302660 1301461 -3 - 1200 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67506.peg.1122 CDS gi|448276180|gb|CP004085.1| 1303212 1302796 -3 - 417 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67506.peg.1123 CDS gi|448276180|gb|CP004085.1| 1304201 1303263 -2 - 939 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67506.peg.1124 CDS gi|448276180|gb|CP004085.1| 1305434 1304229 -2 - 1206 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67506.peg.1125 CDS gi|448276180|gb|CP004085.1| 1306397 1305483 -2 - 915 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67506.peg.1126 CDS gi|448276180|gb|CP004085.1| 1307627 1306425 -2 - 1203 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67506.peg.1127 CDS gi|448276180|gb|CP004085.1| 1308742 1307705 -1 - 1038 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67506.peg.1128 CDS gi|448276180|gb|CP004085.1| 1311505 1308938 -1 - 2568 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67506.peg.1129 CDS gi|448276180|gb|CP004085.1| 1312624 1311578 -1 - 1047 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67506.peg.1130 CDS gi|448276180|gb|CP004085.1| 1313487 1312678 -3 - 810 FIG011178: rRNA methylase RNA methylation
fig|6666666.67506.peg.1131 CDS gi|448276180|gb|CP004085.1| 1314042 1313680 -3 - 363 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67506.peg.1132 CDS gi|448276180|gb|CP004085.1| 1314323 1314129 -2 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67506.peg.1133 CDS gi|448276180|gb|CP004085.1| 1314722 1314363 -2 - 360 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67506.peg.1134 CDS gi|448276180|gb|CP004085.1| 1317989 1315137 -2 - 2853 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67506.peg.1135 CDS gi|448276180|gb|CP004085.1| 1318077 1318778 3 + 702 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67506.peg.1136 CDS gi|448276180|gb|CP004085.1| 1318882 1319616 1 + 735 FIG00995839: hypothetical protein - none -
fig|6666666.67506.peg.1137 CDS gi|448276180|gb|CP004085.1| 1319638 1322022 1 + 2385 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67506.peg.1138 CDS gi|448276180|gb|CP004085.1| 1322162 1323097 2 + 936 hypothetical protein - none -
fig|6666666.67506.peg.1139 CDS gi|448276180|gb|CP004085.1| 1323681 1323238 -3 - 444 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67506.peg.1140 CDS gi|448276180|gb|CP004085.1| 1325815 1323683 -1 - 2133 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67506.peg.1141 CDS gi|448276180|gb|CP004085.1| 1326561 1325953 -3 - 609 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67506.peg.1142 CDS gi|448276180|gb|CP004085.1| 1326910 1326572 -1 - 339 hypothetical protein - none -
fig|6666666.67506.peg.1143 CDS gi|448276180|gb|CP004085.1| 1327025 1328254 2 + 1230 FIG00546368: hypothetical protein - none -
fig|6666666.67506.peg.1144 CDS gi|448276180|gb|CP004085.1| 1329676 1328360 -1 - 1317 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Butyrate metabolism cluster;
CBSS-246196.1.peg.364;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67506.peg.1145 CDS gi|448276180|gb|CP004085.1| 1329716 1329844 2 + 129 hypothetical protein - none -
fig|6666666.67506.peg.1146 CDS gi|448276180|gb|CP004085.1| 1329989 1329858 -2 - 132 hypothetical protein - none -
fig|6666666.67506.peg.1147 CDS gi|448276180|gb|CP004085.1| 1329966 1331324 3 + 1359 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67506.peg.1148 CDS gi|448276180|gb|CP004085.1| 1331375 1332286 2 + 912 Acyl dehydratase CBSS-246196.1.peg.364
fig|6666666.67506.peg.1149 CDS gi|448276180|gb|CP004085.1| 1332380 1332952 2 + 573 hypothetical protein - none -
fig|6666666.67506.peg.1150 CDS gi|448276180|gb|CP004085.1| 1333771 1332917 -1 - 855 hypothetical protein - none -
fig|6666666.67506.peg.1151 CDS gi|448276180|gb|CP004085.1| 1335352 1333892 -1 - 1461 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.67506.peg.1152 CDS gi|448276180|gb|CP004085.1| 1335892 1335434 -1 - 459 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67506.peg.1153 CDS gi|448276180|gb|CP004085.1| 1336569 1335994 -3 - 576 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67506.peg.1154 CDS gi|448276180|gb|CP004085.1| 1336709 1337710 2 + 1002 Putative membrane protein - none -
fig|6666666.67506.peg.1155 CDS gi|448276180|gb|CP004085.1| 1340500 1337870 -1 - 2631 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67506.peg.1156 CDS gi|448276180|gb|CP004085.1| 1341539 1340742 -2 - 798 FIG00356309: hypothetical protein - none -
fig|6666666.67506.peg.1157 CDS gi|448276180|gb|CP004085.1| 1342326 1341532 -3 - 795 Putative ABC transport system membrane protein - none -
fig|6666666.67506.peg.1158 CDS gi|448276180|gb|CP004085.1| 1343038 1342358 -1 - 681 Putative ABC transport system ATP-binding protein - none -
fig|6666666.67506.peg.1159 CDS gi|448276180|gb|CP004085.1| 1344168 1343038 -3 - 1131 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.67506.peg.1160 CDS gi|448276180|gb|CP004085.1| 1345337 1344393 -2 - 945 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.67506.peg.1161 CDS gi|448276180|gb|CP004085.1| 1345972 1345793 -1 - 180 hypothetical protein - none -
fig|6666666.67506.peg.1162 CDS gi|448276180|gb|CP004085.1| 1345958 1347892 2 + 1935 Ferrous iron transport protein B - none -
fig|6666666.67506.peg.1163 CDS gi|448276180|gb|CP004085.1| 1348922 1348161 -2 - 762 FIG00543922: hypothetical protein - none -
fig|6666666.67506.peg.1164 CDS gi|448276180|gb|CP004085.1| 1350320 1348944 -2 - 1377 hypothetical protein - none -
fig|6666666.67506.peg.1165 CDS gi|448276180|gb|CP004085.1| 1351555 1350317 -1 - 1239 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67506.peg.1166 CDS gi|448276180|gb|CP004085.1| 1352085 1351552 -3 - 534 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67506.peg.1167 CDS gi|448276180|gb|CP004085.1| 1352163 1353140 3 + 978 putative secreted protein - none -
fig|6666666.67506.peg.1168 CDS gi|448276180|gb|CP004085.1| 1353127 1354104 1 + 978 putative amino acid ABC transporter permease protein - none -
fig|6666666.67506.peg.1169 CDS gi|448276180|gb|CP004085.1| 1354101 1354865 3 + 765 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.1170 CDS gi|448276180|gb|CP004085.1| 1355372 1354992 -2 - 381 FIG00544156: hypothetical protein - none -
fig|6666666.67506.peg.1171 CDS gi|448276180|gb|CP004085.1| 1355422 1356780 1 + 1359 No significant database matches - none -
fig|6666666.67506.peg.1172 CDS gi|448276180|gb|CP004085.1| 1356866 1358119 2 + 1254 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67506.peg.1173 CDS gi|448276180|gb|CP004085.1| 1359664 1358267 -1 - 1398 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67506.peg.1174 CDS gi|448276180|gb|CP004085.1| 1360651 1359749 -1 - 903 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67506.peg.1175 CDS gi|448276180|gb|CP004085.1| 1361439 1360666 -3 - 774 Tryptophan synthase alpha chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67506.peg.1176 CDS gi|448276180|gb|CP004085.1| 1362696 1361440 -3 - 1257 Tryptophan synthase beta chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67506.peg.1177 CDS gi|448276180|gb|CP004085.1| 1363542 1362721 -3 - 822 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67506.peg.1178 CDS gi|448276180|gb|CP004085.1| 1364287 1363637 -1 - 651 FIG00545012: hypothetical protein - none -
fig|6666666.67506.peg.1179 CDS gi|448276180|gb|CP004085.1| 1365864 1364329 -3 - 1536 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67506.peg.1180 CDS gi|448276180|gb|CP004085.1| 1366212 1365868 -3 - 345 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis
fig|6666666.67506.peg.1181 CDS gi|448276180|gb|CP004085.1| 1366970 1366209 -2 - 762 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67506.peg.1182 CDS gi|448276180|gb|CP004085.1| 1367917 1366967 -1 - 951 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67506.peg.1183 CDS gi|448276180|gb|CP004085.1| 1368687 1367917 -3 - 771 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) / Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis;
Tryptophan synthesis
fig|6666666.67506.peg.1184 CDS gi|448276180|gb|CP004085.1| 1369400 1368765 -2 - 636 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67506.peg.1185 CDS gi|448276180|gb|CP004085.1| 1370844 1369522 -3 - 1323 putative transport protein - none -
fig|6666666.67506.peg.1186 CDS gi|448276180|gb|CP004085.1| 1371577 1370963 -1 - 615 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67506.peg.1187 CDS gi|448276180|gb|CP004085.1| 1372668 1371580 -3 - 1089 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67506.peg.1188 CDS gi|448276180|gb|CP004085.1| 1373980 1372661 -1 - 1320 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67506.peg.1189 CDS gi|448276180|gb|CP004085.1| 1374073 1375620 1 + 1548 FIG00546329: hypothetical protein - none -
fig|6666666.67506.peg.1190 CDS gi|448276180|gb|CP004085.1| 1376141 1375617 -2 - 525 FIG00545115: hypothetical protein - none -
fig|6666666.67506.peg.1191 CDS gi|448276180|gb|CP004085.1| 1376821 1376132 -1 - 690 FIG00545144: hypothetical protein - none -
fig|6666666.67506.peg.1192 CDS gi|448276180|gb|CP004085.1| 1376884 1377660 1 + 777 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67506.peg.1193 CDS gi|448276180|gb|CP004085.1| 1377860 1378312 2 + 453 hypothetical protein - none -
fig|6666666.67506.peg.1194 CDS gi|448276180|gb|CP004085.1| 1378358 1379350 2 + 993 FIG00544169: hypothetical protein - none -
fig|6666666.67506.peg.1195 CDS gi|448276180|gb|CP004085.1| 1379641 1379357 -1 - 285 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67506.peg.1196 CDS gi|448276180|gb|CP004085.1| 1379962 1379729 -1 - 234 FIG00544856: hypothetical protein - none -
fig|6666666.67506.peg.1197 CDS gi|448276180|gb|CP004085.1| 1380746 1380060 -2 - 687 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.67506.peg.1198 CDS gi|448276180|gb|CP004085.1| 1384365 1380799 -3 - 3567 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67506.peg.1199 CDS gi|448276180|gb|CP004085.1| 1384458 1385618 3 + 1161 L-gulono-1,4-lactone oxidase (EC 1.1.3.8) - none -
fig|6666666.67506.peg.1200 CDS gi|448276180|gb|CP004085.1| 1386517 1385615 -1 - 903 Protein rarD - none -
fig|6666666.67506.peg.1201 CDS gi|448276180|gb|CP004085.1| 1387123 1386521 -1 - 603 FIG00544566: hypothetical protein - none -
fig|6666666.67506.peg.1202 CDS gi|448276180|gb|CP004085.1| 1388078 1387134 -2 - 945 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.1203 CDS gi|448276180|gb|CP004085.1| 1388578 1388075 -1 - 504 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67506.peg.1204 CDS gi|448276180|gb|CP004085.1| 1388617 1389537 1 + 921 FIG00544955: hypothetical protein - none -
fig|6666666.67506.peg.1205 CDS gi|448276180|gb|CP004085.1| 1390100 1389585 -2 - 516 Putative secreted protein - none -
fig|6666666.67506.peg.1206 CDS gi|448276180|gb|CP004085.1| 1391631 1390198 -3 - 1434 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67506.peg.1207 CDS gi|448276180|gb|CP004085.1| 1394832 1391638 -3 - 3195 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67506.peg.1208 CDS gi|448276180|gb|CP004085.1| 1395223 1395110 -1 - 114 hypothetical protein - none -
fig|6666666.67506.peg.1209 CDS gi|448276180|gb|CP004085.1| 1396350 1395280 -3 - 1071 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67506.peg.1210 CDS gi|448276180|gb|CP004085.1| 1396818 1396531 -3 - 288 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67506.peg.1211 CDS gi|448276180|gb|CP004085.1| 1397388 1396825 -3 - 564 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67506.peg.1212 CDS gi|448276180|gb|CP004085.1| 1398155 1397445 -2 - 711 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67506.peg.1213 CDS gi|448276180|gb|CP004085.1| 1398886 1398152 -1 - 735 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67506.peg.1214 CDS gi|448276180|gb|CP004085.1| 1400157 1398892 -3 - 1266 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67506.peg.1215 CDS gi|448276180|gb|CP004085.1| 1400137 1400307 1 + 171 hypothetical protein - none -
fig|6666666.67506.peg.1216 CDS gi|448276180|gb|CP004085.1| 1401056 1400400 -2 - 657 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67506.peg.1217 CDS gi|448276180|gb|CP004085.1| 1402633 1401170 -1 - 1464 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67506.peg.1218 CDS gi|448276180|gb|CP004085.1| 1402592 1402738 2 + 147 hypothetical protein - none -
fig|6666666.67506.peg.1219 CDS gi|448276180|gb|CP004085.1| 1403887 1402754 -1 - 1134 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1220 CDS gi|448276180|gb|CP004085.1| 1405510 1403894 -1 - 1617 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67506.peg.1221 CDS gi|448276180|gb|CP004085.1| 1406991 1405510 -3 - 1482 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67506.peg.1222 CDS gi|448276180|gb|CP004085.1| 1408113 1407013 -3 - 1101 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1223 CDS gi|448276180|gb|CP004085.1| 1409625 1408123 -3 - 1503 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67506.peg.1224 CDS gi|448276180|gb|CP004085.1| 1411244 1409643 -2 - 1602 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67506.peg.1225 CDS gi|448276180|gb|CP004085.1| 1413141 1411246 -3 - 1896 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1226 CDS gi|448276180|gb|CP004085.1| 1413148 1413261 1 + 114 hypothetical protein - none -
fig|6666666.67506.peg.1227 CDS gi|448276180|gb|CP004085.1| 1414106 1413285 -2 - 822 FIG00544004: hypothetical protein - none -
fig|6666666.67506.peg.1228 CDS gi|448276180|gb|CP004085.1| 1415259 1414198 -3 - 1062 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67506.peg.1229 CDS gi|448276180|gb|CP004085.1| 1415930 1415499 -2 - 432 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67506.peg.1230 CDS gi|448276180|gb|CP004085.1| 1416775 1416383 -1 - 393 Possible membrane protein - none -
fig|6666666.67506.peg.1231 CDS gi|448276180|gb|CP004085.1| 1417364 1417005 -2 - 360 FIG00544752: hypothetical protein - none -
fig|6666666.67506.peg.1232 CDS gi|448276180|gb|CP004085.1| 1417584 1418267 3 + 684 hypothetical protein - none -
fig|6666666.67506.peg.1233 CDS gi|448276180|gb|CP004085.1| 1419343 1418306 -1 - 1038 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67506.peg.1234 CDS gi|448276180|gb|CP004085.1| 1419575 1420759 2 + 1185 Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Carotenoids;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67506.peg.1235 CDS gi|448276180|gb|CP004085.1| 1420763 1422451 2 + 1689 Phytoene dehydrogenase and related proteins Carotenoids
fig|6666666.67506.peg.1236 CDS gi|448276180|gb|CP004085.1| 1422448 1424133 1 + 1686 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67506.peg.1237 CDS gi|448276180|gb|CP004085.1| 1424727 1427078 3 + 2352 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67506.peg.1238 CDS gi|448276180|gb|CP004085.1| 1428707 1427319 -2 - 1389 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67506.peg.1239 CDS gi|448276180|gb|CP004085.1| 1429249 1428746 -1 - 504 FIG00544385: hypothetical protein - none -
fig|6666666.67506.peg.1240 CDS gi|448276180|gb|CP004085.1| 1430407 1429262 -1 - 1146 hypothetical membrane protein - none -
fig|6666666.67506.peg.1241 CDS gi|448276180|gb|CP004085.1| 1431296 1430553 -2 - 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.1242 CDS gi|448276180|gb|CP004085.1| 1432380 1431400 -3 - 981 glucokinase( EC:2.7.1.2 ) - none -
fig|6666666.67506.peg.1243 CDS gi|448276180|gb|CP004085.1| 1433754 1432513 -3 - 1242 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67506.peg.1244 CDS gi|448276180|gb|CP004085.1| 1434951 1433770 -3 - 1182 NLP/P60 family protein - none -
fig|6666666.67506.peg.1245 CDS gi|448276180|gb|CP004085.1| 1435910 1435284 -2 - 627 putative secreted protein - none -
fig|6666666.67506.peg.1246 CDS gi|448276180|gb|CP004085.1| 1438939 1437302 -1 - 1638 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67506.peg.1247 CDS gi|448276180|gb|CP004085.1| 1440141 1438936 -3 - 1206 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67506.peg.1248 CDS gi|448276180|gb|CP004085.1| 1441034 1440138 -2 - 897 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67506.peg.1249 CDS gi|448276180|gb|CP004085.1| 1441687 1441103 -1 - 585 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67506.peg.1250 CDS gi|448276180|gb|CP004085.1| 1442138 1443247 2 + 1110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67506.peg.1251 CDS gi|448276180|gb|CP004085.1| 1443975 1443544 -3 - 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67506.peg.1252 CDS gi|448276180|gb|CP004085.1| 1445118 1444015 -3 - 1104 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67506.peg.1253 CDS gi|448276180|gb|CP004085.1| 1445462 1447420 2 + 1959 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67506.peg.1254 CDS gi|448276180|gb|CP004085.1| 1448022 1447678 -3 - 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67506.peg.1255 CDS gi|448276180|gb|CP004085.1| 1448183 1448893 2 + 711 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67506.peg.1256 CDS gi|448276180|gb|CP004085.1| 1448894 1449877 2 + 984 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.67506.peg.1257 CDS gi|448276180|gb|CP004085.1| 1452036 1450885 -3 - 1152 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67506.peg.1258 CDS gi|448276180|gb|CP004085.1| 1452126 1453748 3 + 1623 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67506.peg.1259 CDS gi|448276180|gb|CP004085.1| 1454230 1453775 -1 - 456 Putative oxidoreductase - none -
fig|6666666.67506.peg.1260 CDS gi|448276180|gb|CP004085.1| 1454371 1456215 1 + 1845 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67506.peg.1261 CDS gi|448276180|gb|CP004085.1| 1456374 1457072 3 + 699 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67506.peg.1262 CDS gi|448276180|gb|CP004085.1| 1457194 1458210 1 + 1017 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67506.peg.1263 CDS gi|448276180|gb|CP004085.1| 1458294 1459064 3 + 771 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67506.peg.1264 CDS gi|448276180|gb|CP004085.1| 1459137 1459790 3 + 654 Threonine efflux protein - none -
fig|6666666.67506.peg.1265 CDS gi|448276180|gb|CP004085.1| 1460424 1459948 -3 - 477 FIG00543905: hypothetical protein - none -
fig|6666666.67506.peg.1266 CDS gi|448276180|gb|CP004085.1| 1462401 1460704 -3 - 1698 hypothetical protein - none -
fig|6666666.67506.peg.1267 CDS gi|448276180|gb|CP004085.1| 1463331 1462594 -3 - 738 hypothetical protein - none -
fig|6666666.67506.peg.1268 CDS gi|448276180|gb|CP004085.1| 1463625 1465061 3 + 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1269 CDS gi|448276180|gb|CP004085.1| 1465796 1465155 -2 - 642 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1270 CDS gi|448276180|gb|CP004085.1| 1467054 1466029 -3 - 1026 FIG00545097: hypothetical protein - none -
fig|6666666.67506.peg.1271 CDS gi|448276180|gb|CP004085.1| 1467841 1467047 -1 - 795 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1272 CDS gi|448276180|gb|CP004085.1| 1468884 1467841 -3 - 1044 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1273 CDS gi|448276180|gb|CP004085.1| 1469911 1468865 -1 - 1047 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1274 CDS gi|448276180|gb|CP004085.1| 1471709 1469922 -2 - 1788 FIG01124361: hypothetical protein - none -
fig|6666666.67506.peg.1275 CDS gi|448276180|gb|CP004085.1| 1471979 1472341 2 + 363 putative membrane protein - none -
fig|6666666.67506.peg.1276 CDS gi|448276180|gb|CP004085.1| 1472664 1474751 3 + 2088 hypothetical protein - none -
fig|6666666.67506.peg.1277 CDS gi|448276180|gb|CP004085.1| 1475966 1475691 -2 - 276 hypothetical protein - none -
fig|6666666.67506.peg.1278 CDS gi|448276180|gb|CP004085.1| 1476373 1477947 1 + 1575 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.1279 CDS gi|448276180|gb|CP004085.1| 1477953 1479113 3 + 1161 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.1280 CDS gi|448276180|gb|CP004085.1| 1479120 1482287 3 + 3168 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.1281 CDS gi|448276180|gb|CP004085.1| 1483012 1482284 -1 - 729 hypothetical protein - none -
fig|6666666.67506.peg.1282 CDS gi|448276180|gb|CP004085.1| 1484178 1483063 -3 - 1116 FIG005429: hypothetical protein - none -
fig|6666666.67506.peg.1283 CDS gi|448276180|gb|CP004085.1| 1487515 1484165 -1 - 3351 FIG007317: hypothetical protein - none -
fig|6666666.67506.peg.1284 CDS gi|448276180|gb|CP004085.1| 1488099 1487512 -3 - 588 FIG039767: hypothetical protein - none -
fig|6666666.67506.peg.1285 CDS gi|448276180|gb|CP004085.1| 1489572 1488100 -3 - 1473 CBSS-498211.3.peg.1514: hypothetical protein - none -
fig|6666666.67506.peg.1286 CDS gi|448276180|gb|CP004085.1| 1489878 1490249 3 + 372 Carboxymuconolactone decarboxylase - none -
fig|6666666.67506.peg.1287 CDS gi|448276180|gb|CP004085.1| 1490366 1491961 2 + 1596 putative transmembrane efflux protein - none -
fig|6666666.67506.peg.1288 CDS gi|448276180|gb|CP004085.1| 1492978 1492022 -1 - 957 hypothetical protein - none -
fig|6666666.67506.peg.1289 CDS gi|448276180|gb|CP004085.1| 1493548 1494741 1 + 1194 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67506.peg.1290 CDS gi|448276180|gb|CP004085.1| 1494920 1494738 -2 - 183 hypothetical protein - none -
fig|6666666.67506.peg.1291 CDS gi|448276180|gb|CP004085.1| 1494891 1496348 3 + 1458 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1292 CDS gi|448276180|gb|CP004085.1| 1496936 1497883 2 + 948 FIG00544618: hypothetical protein - none -
fig|6666666.67506.peg.1293 CDS gi|448276180|gb|CP004085.1| 1499021 1498302 -2 - 720 hypothetical protein - none -
fig|6666666.67506.peg.1294 CDS gi|448276180|gb|CP004085.1| 1499812 1499018 -1 - 795 ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.1295 CDS gi|448276180|gb|CP004085.1| 1500171 1499809 -3 - 363 Transcriptional regulator, GntR family - none -
fig|6666666.67506.peg.1296 CDS gi|448276180|gb|CP004085.1| 1501972 1500986 -1 - 987 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67506.peg.1297 CDS gi|448276180|gb|CP004085.1| 1503776 1502325 -2 - 1452 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67506.peg.1298 CDS gi|448276180|gb|CP004085.1| 1504019 1505362 2 + 1344 hypothetical protein - none -
fig|6666666.67506.peg.1299 CDS gi|448276180|gb|CP004085.1| 1506305 1505559 -2 - 747 putative ABC transporter - none -
fig|6666666.67506.peg.1300 CDS gi|448276180|gb|CP004085.1| 1507196 1506351 -2 - 846 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.67506.peg.1301 CDS gi|448276180|gb|CP004085.1| 1507810 1507253 -1 - 558 hypothetical protein - none -
fig|6666666.67506.peg.1302 CDS gi|448276180|gb|CP004085.1| 1509096 1507822 -3 - 1275 FIG00547289: hypothetical protein - none -
fig|6666666.67506.peg.1303 CDS gi|448276180|gb|CP004085.1| 1510359 1509100 -3 - 1260 sodium:dicarboxylate symporter - none -
fig|6666666.67506.peg.1304 CDS gi|448276180|gb|CP004085.1| 1514190 1510534 -3 - 3657 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.67506.peg.1305 CDS gi|448276180|gb|CP004085.1| 1515655 1514315 -1 - 1341 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1306 CDS gi|448276180|gb|CP004085.1| 1515747 1516553 3 + 807 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.67506.peg.1307 CDS gi|448276180|gb|CP004085.1| 1516689 1516558 -3 - 132 hypothetical protein - none -
fig|6666666.67506.peg.1308 CDS gi|448276180|gb|CP004085.1| 1519217 1516710 -2 - 2508 Cation-transporting ATPase, E1-E2 family - none -
fig|6666666.67506.peg.1309 CDS gi|448276180|gb|CP004085.1| 1519431 1519240 -3 - 192 FIG00544054: hypothetical protein - none -
fig|6666666.67506.peg.1310 CDS gi|448276180|gb|CP004085.1| 1521295 1519976 -1 - 1320 FIG006762: Phosphoglycerate mutase family - none -
fig|6666666.67506.peg.1311 CDS gi|448276180|gb|CP004085.1| 1522579 1521386 -1 - 1194 UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain - none -
fig|6666666.67506.peg.1312 CDS gi|448276180|gb|CP004085.1| 1522796 1523449 2 + 654 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.67506.peg.1313 CDS gi|448276180|gb|CP004085.1| 1523535 1524059 3 + 525 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.67506.peg.1314 CDS gi|448276180|gb|CP004085.1| 1525232 1524150 -2 - 1083 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67506.peg.1315 CDS gi|448276180|gb|CP004085.1| 1526076 1525633 -3 - 444 FIG00544601: hypothetical protein - none -
fig|6666666.67506.peg.1316 CDS gi|448276180|gb|CP004085.1| 1526380 1529184 1 + 2805 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.1317 CDS gi|448276180|gb|CP004085.1| 1529247 1529654 3 + 408 acyl carrier protein - none -
fig|6666666.67506.peg.1318 CDS gi|448276180|gb|CP004085.1| 1529698 1530579 1 + 882 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.67506.peg.1319 CDS gi|448276180|gb|CP004085.1| 1531641 1530658 -3 - 984 hypothetical protein - none -
fig|6666666.67506.peg.1320 CDS gi|448276180|gb|CP004085.1| 1532641 1531625 -1 - 1017 hypothetical protein - none -
fig|6666666.67506.peg.1321 CDS gi|448276180|gb|CP004085.1| 1532866 1533609 1 + 744 hypothetical protein - none -
fig|6666666.67506.peg.1322 CDS gi|448276180|gb|CP004085.1| 1533791 1535935 2 + 2145 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters
fig|6666666.67506.peg.1323 CDS gi|448276180|gb|CP004085.1| 1536333 1537430 3 + 1098 Mobile element protein - none -
fig|6666666.67506.peg.1324 CDS gi|448276180|gb|CP004085.1| 1538368 1537997 -1 - 372 hypothetical protein - none -
fig|6666666.67506.peg.1325 CDS gi|448276180|gb|CP004085.1| 1540815 1538374 -3 - 2442 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67506.peg.1326 CDS gi|448276180|gb|CP004085.1| 1541665 1540982 -1 - 684 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.67506.peg.1327 CDS gi|448276180|gb|CP004085.1| 1542835 1541735 -1 - 1101 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.67506.peg.1328 CDS gi|448276180|gb|CP004085.1| 1543130 1543459 2 + 330 FIG00543844: hypothetical protein - none -
fig|6666666.67506.peg.1329 CDS gi|448276180|gb|CP004085.1| 1545575 1543572 -2 - 2004 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.67506.peg.1330 CDS gi|448276180|gb|CP004085.1| 1545739 1547466 1 + 1728 Cholesterol oxidase (EC 1.1.3.6) - none -
fig|6666666.67506.peg.1331 CDS gi|448276180|gb|CP004085.1| 1547496 1547999 3 + 504 putative ribonuclease - none -
fig|6666666.67506.peg.1332 CDS gi|448276180|gb|CP004085.1| 1549293 1548013 -3 - 1281 dNTP triphosphohydrolase, broad substrate specificity, subgroup 2 Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.67506.peg.1333 CDS gi|448276180|gb|CP004085.1| 1550991 1549390 -3 - 1602 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67506.peg.1334 CDS gi|448276180|gb|CP004085.1| 1551563 1551024 -2 - 540 FIG00544046: hypothetical protein - none -
fig|6666666.67506.peg.1335 CDS gi|448276180|gb|CP004085.1| 1552942 1551563 -1 - 1380 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67506.peg.1336 CDS gi|448276180|gb|CP004085.1| 1553164 1553601 1 + 438 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.67506.peg.1337 CDS gi|448276180|gb|CP004085.1| 1554794 1553598 -2 - 1197 FIG00544679: hypothetical protein - none -
fig|6666666.67506.peg.1338 CDS gi|448276180|gb|CP004085.1| 1555633 1554875 -1 - 759 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.67506.peg.1339 CDS gi|448276180|gb|CP004085.1| 1556502 1555744 -3 - 759 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67506.peg.1340 CDS gi|448276180|gb|CP004085.1| 1556952 1556533 -3 - 420 FIG00547734: hypothetical protein - none -
fig|6666666.67506.peg.1341 CDS gi|448276180|gb|CP004085.1| 1557568 1556936 -1 - 633 FIG00546274: hypothetical protein - none -
fig|6666666.67506.peg.1342 CDS gi|448276180|gb|CP004085.1| 1558669 1557638 -1 - 1032 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.67506.peg.1343 CDS gi|448276180|gb|CP004085.1| 1560215 1558662 -2 - 1554 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.67506.peg.1344 CDS gi|448276180|gb|CP004085.1| 1560803 1560216 -2 - 588 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67506.peg.1345 CDS gi|448276180|gb|CP004085.1| 1561855 1560803 -1 - 1053 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67506.peg.1346 CDS gi|448276180|gb|CP004085.1| 1562618 1561863 -2 - 756 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67506.peg.1347 CDS gi|448276180|gb|CP004085.1| 1563857 1562715 -2 - 1143 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67506.peg.1348 CDS gi|448276180|gb|CP004085.1| 1564383 1563904 -3 - 480 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67506.peg.1349 CDS gi|448276180|gb|CP004085.1| 1566291 1565026 -3 - 1266 Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.1350 CDS gi|448276180|gb|CP004085.1| 1567044 1566298 -3 - 747 FIG00543880: hypothetical protein - none -
fig|6666666.67506.peg.1351 CDS gi|448276180|gb|CP004085.1| 1569051 1567216 -3 - 1836 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.1352 CDS gi|448276180|gb|CP004085.1| 1569575 1569288 -2 - 288 hypothetical protein - none -
fig|6666666.67506.peg.1353 CDS gi|448276180|gb|CP004085.1| 1571773 1569611 -1 - 2163 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67506.peg.1354 CDS gi|448276180|gb|CP004085.1| 1572808 1571840 -1 - 969 iron transport system substrate-binding protein - none -
fig|6666666.67506.peg.1355 CDS gi|448276180|gb|CP004085.1| 1572984 1574267 3 + 1284 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67506.peg.1356 CDS gi|448276180|gb|CP004085.1| 1574339 1576234 2 + 1896 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.67506.peg.1357 CDS gi|448276180|gb|CP004085.1| 1576544 1576371 -2 - 174 FIG00545890: hypothetical protein - none -
fig|6666666.67506.peg.1358 CDS gi|448276180|gb|CP004085.1| 1577474 1576623 -2 - 852 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.1359 CDS gi|448276180|gb|CP004085.1| 1577624 1580215 2 + 2592 hypothetical protein - none -
fig|6666666.67506.peg.1360 CDS gi|448276180|gb|CP004085.1| 1581229 1580303 -1 - 927 hypothetical protein - none -
fig|6666666.67506.peg.1361 CDS gi|448276180|gb|CP004085.1| 1582065 1581295 -3 - 771 FIG00545283: hypothetical protein - none -
fig|6666666.67506.peg.1362 CDS gi|448276180|gb|CP004085.1| 1582843 1582214 -1 - 630 hypothetical protein - none -
fig|6666666.67506.peg.1363 CDS gi|448276180|gb|CP004085.1| 1582990 1584039 1 + 1050 Sodium-dependent transporter - none -
fig|6666666.67506.peg.1364 CDS gi|448276180|gb|CP004085.1| 1586041 1584188 -1 - 1854 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.67506.peg.1365 CDS gi|448276180|gb|CP004085.1| 1586194 1586763 1 + 570 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67506.peg.1366 CDS gi|448276180|gb|CP004085.1| 1587001 1587264 1 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.67506.peg.1367 CDS gi|448276180|gb|CP004085.1| 1587422 1588450 2 + 1029 FIG00548165: hypothetical protein - none -
fig|6666666.67506.peg.1368 CDS gi|448276180|gb|CP004085.1| 1589548 1588544 -1 - 1005 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67506.peg.1369 CDS gi|448276180|gb|CP004085.1| 1591039 1589555 -1 - 1485 ComEC/Rec2-related protein - none -
fig|6666666.67506.peg.1370 CDS gi|448276180|gb|CP004085.1| 1591184 1591510 2 + 327 hypothetical protein - none -
fig|6666666.67506.peg.1371 CDS gi|448276180|gb|CP004085.1| 1592715 1591759 -3 - 957 FIG00545717: hypothetical protein - none -
fig|6666666.67506.peg.1372 CDS gi|448276180|gb|CP004085.1| 1593744 1592782 -3 - 963 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67506.peg.1373 CDS gi|448276180|gb|CP004085.1| 1594526 1593753 -2 - 774 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67506.peg.1374 CDS gi|448276180|gb|CP004085.1| 1595040 1594567 -3 - 474 Iojap protein - none -
fig|6666666.67506.peg.1375 CDS gi|448276180|gb|CP004085.1| 1595807 1595157 -2 - 651 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67506.peg.1376 CDS gi|448276180|gb|CP004085.1| 1597151 1595859 -2 - 1293 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67506.peg.1377 CDS gi|448276180|gb|CP004085.1| 1598390 1597212 -2 - 1179 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.67506.peg.1378 CDS gi|448276180|gb|CP004085.1| 1600015 1598501 -1 - 1515 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.67506.peg.1379 CDS gi|448276180|gb|CP004085.1| 1600409 1600143 -2 - 267 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67506.peg.1380 CDS gi|448276180|gb|CP004085.1| 1600775 1600473 -2 - 303 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67506.peg.1381 CDS gi|448276180|gb|CP004085.1| 1604721 1601149 -3 - 3573 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.67506.peg.1382 CDS gi|448276180|gb|CP004085.1| 1605049 1605834 1 + 786 FIG00546902: hypothetical protein - none -
fig|6666666.67506.peg.1383 CDS gi|448276180|gb|CP004085.1| 1606325 1605915 -2 - 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions
fig|6666666.67506.peg.1384 CDS gi|448276180|gb|CP004085.1| 1606562 1607428 2 + 867 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.1385 CDS gi|448276180|gb|CP004085.1| 1607957 1607529 -2 - 429 Possible membrane protein - none -
fig|6666666.67506.peg.1386 CDS gi|448276180|gb|CP004085.1| 1609627 1607990 -1 - 1638 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67506.peg.1387 CDS gi|448276180|gb|CP004085.1| 1612410 1609624 -3 - 2787 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67506.peg.1388 CDS gi|448276180|gb|CP004085.1| 1613538 1612534 -3 - 1005 Malate dehydrogenase (EC 1.1.1.37) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67506.peg.1389 CDS gi|448276180|gb|CP004085.1| 1613749 1614441 1 + 693 Transcriptional regulator, TetR family - none -
fig|6666666.67506.peg.1390 CDS gi|448276180|gb|CP004085.1| 1615804 1614530 -1 - 1275 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67506.peg.1391 CDS gi|448276180|gb|CP004085.1| 1616593 1615973 -1 - 621 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67506.peg.1392 CDS gi|448276180|gb|CP004085.1| 1617169 1616597 -1 - 573 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67506.peg.1393 CDS gi|448276180|gb|CP004085.1| 1618939 1617419 -1 - 1521 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67506.peg.1394 CDS gi|448276180|gb|CP004085.1| 1620135 1619662 -3 - 474 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.67506.peg.1395 CDS gi|448276180|gb|CP004085.1| 1620794 1620141 -2 - 654 FIG00544229: hypothetical protein - none -
fig|6666666.67506.peg.1396 CDS gi|448276180|gb|CP004085.1| 1620925 1623600 1 + 2676 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67506.peg.1397 CDS gi|448276180|gb|CP004085.1| 1623777 1624187 3 + 411 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67506.peg.1398 CDS gi|448276180|gb|CP004085.1| 1624981 1624184 -1 - 798 FIG00545013: hypothetical protein - none -
fig|6666666.67506.peg.1399 CDS gi|448276180|gb|CP004085.1| 1625201 1625010 -2 - 192 Protein RtcB - none -
fig|6666666.67506.peg.1400 CDS gi|448276180|gb|CP004085.1| 1626297 1625272 -3 - 1026 luciferase family protein - none -
fig|6666666.67506.peg.1401 CDS gi|448276180|gb|CP004085.1| 1628025 1626355 -3 - 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.1402 CDS gi|448276180|gb|CP004085.1| 1628753 1628244 -2 - 510 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67506.peg.1403 CDS gi|448276180|gb|CP004085.1| 1631391 1629091 -3 - 2301 Copper resistance protein D Copper homeostasis
fig|6666666.67506.peg.1404 CDS gi|448276180|gb|CP004085.1| 1633763 1631808 -2 - 1956 hypothetical protein - none -
fig|6666666.67506.peg.1405 CDS gi|448276180|gb|CP004085.1| 1634844 1633861 -3 - 984 hypothetical protein - none -
fig|6666666.67506.peg.1406 CDS gi|448276180|gb|CP004085.1| 1636373 1635030 -2 - 1344 hypothetical protein - none -
fig|6666666.67506.peg.1407 CDS gi|448276180|gb|CP004085.1| 1636898 1637131 2 + 234 hypothetical protein - none -
fig|6666666.67506.peg.1408 CDS gi|448276180|gb|CP004085.1| 1637411 1639249 2 + 1839 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.67506.peg.1409 CDS gi|448276180|gb|CP004085.1| 1639252 1641840 1 + 2589 hypothetical protein - none -
fig|6666666.67506.peg.1410 CDS gi|448276180|gb|CP004085.1| 1642333 1642160 -1 - 174 hypothetical protein - none -
fig|6666666.67506.peg.1411 CDS gi|448276180|gb|CP004085.1| 1644960 1645805 3 + 846 short-chain dehydrogenase - none -
fig|6666666.67506.peg.1412 CDS gi|448276180|gb|CP004085.1| 1645836 1646465 3 + 630 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67506.peg.1413 CDS gi|448276180|gb|CP004085.1| 1646864 1646989 2 + 126 hypothetical protein - none -
fig|6666666.67506.peg.1414 CDS gi|448276180|gb|CP004085.1| 1647479 1647709 2 + 231 hypothetical protein - none -
fig|6666666.67506.peg.1415 CDS gi|448276180|gb|CP004085.1| 1647915 1647706 -3 - 210 Copper chaperone Copper homeostasis
fig|6666666.67506.peg.1416 CDS gi|448276180|gb|CP004085.1| 1648068 1647955 -3 - 114 hypothetical protein - none -
fig|6666666.67506.peg.1417 CDS gi|448276180|gb|CP004085.1| 1648067 1649050 2 + 984 Phytoene synthase (EC 2.5.1.32) Carotenoids;
Protein deglycation
fig|6666666.67506.peg.1418 CDS gi|448276180|gb|CP004085.1| 1650283 1649060 -1 - 1224 putative lipoprotein - none -
fig|6666666.67506.peg.1419 CDS gi|448276180|gb|CP004085.1| 1651426 1650743 -1 - 684 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67506.peg.1420 CDS gi|448276180|gb|CP004085.1| 1652630 1651458 -2 - 1173 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67506.peg.1421 CDS gi|448276180|gb|CP004085.1| 1652802 1653521 3 + 720 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67506.peg.1422 CDS gi|448276180|gb|CP004085.1| 1653768 1654877 3 + 1110 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67506.peg.1423 CDS gi|448276180|gb|CP004085.1| 1655031 1655996 3 + 966 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67506.peg.1424 CDS gi|448276180|gb|CP004085.1| 1656001 1657200 1 + 1200 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67506.peg.1425 CDS gi|448276180|gb|CP004085.1| 1657352 1658131 2 + 780 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67506.peg.1426 CDS gi|448276180|gb|CP004085.1| 1658298 1659326 3 + 1029 putative monooxygenase - none -
fig|6666666.67506.peg.1427 CDS gi|448276180|gb|CP004085.1| 1660732 1660454 -1 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67506.peg.1428 CDS gi|448276180|gb|CP004085.1| 1660847 1661335 2 + 489 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67506.peg.1429 CDS gi|448276180|gb|CP004085.1| 1663545 1663384 -3 - 162 transposase for insertion sequence - none -
fig|6666666.67506.peg.1430 CDS gi|448276180|gb|CP004085.1| 1664874 1664140 -3 - 735 Mobile element protein - none -
fig|6666666.67506.peg.1431 CDS gi|448276180|gb|CP004085.1| 1665188 1664871 -2 - 318 Mobile element protein - none -
fig|6666666.67506.peg.1432 CDS gi|448276180|gb|CP004085.1| 1667589 1666072 -3 - 1518 hypothetical protein - none -
fig|6666666.67506.peg.1433 CDS gi|448276180|gb|CP004085.1| 1667827 1668750 1 + 924 Transposase - none -
fig|6666666.67506.peg.1434 CDS gi|448276180|gb|CP004085.1| 1669715 1668981 -2 - 735 Mobile element protein - none -
fig|6666666.67506.peg.1435 CDS gi|448276180|gb|CP004085.1| 1670029 1669712 -1 - 318 Mobile element protein - none -
fig|6666666.67506.peg.1436 CDS gi|448276180|gb|CP004085.1| 1672430 1670913 -2 - 1518 hypothetical protein - none -
fig|6666666.67506.peg.1437 CDS gi|448276180|gb|CP004085.1| 1672665 1672510 -3 - 156 Mobile element protein - none -
fig|6666666.67506.peg.1438 CDS gi|448276180|gb|CP004085.1| 1672924 1673847 1 + 924 Transposase - none -
fig|6666666.67506.peg.1439 CDS gi|448276180|gb|CP004085.1| 1674828 1674511 -3 - 318 Mobile element protein - none -
fig|6666666.67506.peg.1440 CDS gi|448276180|gb|CP004085.1| 1675316 1675759 2 + 444 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67506.peg.1441 CDS gi|448276180|gb|CP004085.1| 1675815 1676195 3 + 381 FIG00543835: hypothetical protein - none -
fig|6666666.67506.peg.1442 CDS gi|448276180|gb|CP004085.1| 1677577 1676222 -1 - 1356 Metal-dependent amidase/aminoacylase/carboxypeptidase (EC 3.5.1.32) - none -
fig|6666666.67506.peg.1443 CDS gi|448276180|gb|CP004085.1| 1678298 1677660 -2 - 639 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67506.peg.1444 CDS gi|448276180|gb|CP004085.1| 1679105 1678332 -2 - 774 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.67506.peg.1445 CDS gi|448276180|gb|CP004085.1| 1679933 1679127 -2 - 807 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67506.peg.1446 CDS gi|448276180|gb|CP004085.1| 1679943 1680068 3 + 126 hypothetical protein - none -
fig|6666666.67506.peg.1447 CDS gi|448276180|gb|CP004085.1| 1680955 1680089 -1 - 867 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1448 CDS gi|448276180|gb|CP004085.1| 1681649 1681065 -2 - 585 FIG00545125: hypothetical protein - none -
fig|6666666.67506.peg.1449 CDS gi|448276180|gb|CP004085.1| 1682839 1681718 -1 - 1122 possible hydrolase - none -
fig|6666666.67506.peg.1450 CDS gi|448276180|gb|CP004085.1| 1683563 1682889 -2 - 675 Transcriptional regulatory protein - none -
fig|6666666.67506.peg.1451 CDS gi|448276180|gb|CP004085.1| 1683904 1683599 -1 - 306 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67506.peg.1452 CDS gi|448276180|gb|CP004085.1| 1684059 1685444 3 + 1386 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67506.peg.1453 CDS gi|448276180|gb|CP004085.1| 1685526 1687529 3 + 2004 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67506.peg.1454 CDS gi|448276180|gb|CP004085.1| 1687679 1689250 2 + 1572 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.1455 CDS gi|448276180|gb|CP004085.1| 1690055 1689330 -2 - 726 FIG00546117: hypothetical protein - none -
fig|6666666.67506.peg.1456 CDS gi|448276180|gb|CP004085.1| 1691509 1690196 -1 - 1314 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67506.peg.1457 CDS gi|448276180|gb|CP004085.1| 1693284 1691683 -3 - 1602 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67506.peg.1458 CDS gi|448276180|gb|CP004085.1| 1694682 1693687 -3 - 996 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67506.peg.1459 CDS gi|448276180|gb|CP004085.1| 1694931 1695422 3 + 492 Putative bacterioferritin - none -
fig|6666666.67506.peg.1460 CDS gi|448276180|gb|CP004085.1| 1697714 1695552 -2 - 2163 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67506.peg.1461 CDS gi|448276180|gb|CP004085.1| 1698235 1697801 -1 - 435 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67506.peg.1462 CDS gi|448276180|gb|CP004085.1| 1699577 1698243 -2 - 1335 hypothetical protein - none -
fig|6666666.67506.peg.1463 CDS gi|448276180|gb|CP004085.1| 1700134 1699904 -1 - 231 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67506.peg.1464 CDS gi|448276180|gb|CP004085.1| 1700622 1700500 -3 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67506.peg.1465 CDS gi|448276180|gb|CP004085.1| 1700804 1701637 2 + 834 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67506.peg.1466 CDS gi|448276180|gb|CP004085.1| 1701936 1701634 -3 - 303 hypothetical protein - none -
fig|6666666.67506.peg.1467 CDS gi|448276180|gb|CP004085.1| 1702694 1702050 -2 - 645 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67506.peg.1468 CDS gi|448276180|gb|CP004085.1| 1702992 1705292 3 + 2301 FIG00545740: hypothetical protein - none -
fig|6666666.67506.peg.1469 CDS gi|448276180|gb|CP004085.1| 1705362 1705883 3 + 522 hypothetical protein - none -
fig|6666666.67506.peg.1470 CDS gi|448276180|gb|CP004085.1| 1706190 1706762 3 + 573 Mobile element protein - none -
fig|6666666.67506.peg.1471 CDS gi|448276180|gb|CP004085.1| 1707430 1707945 1 + 516 Mobile element protein - none -
fig|6666666.67506.peg.1472 CDS gi|448276180|gb|CP004085.1| 1707962 1708810 2 + 849 Mobile element protein - none -
fig|6666666.67506.peg.1473 CDS gi|448276180|gb|CP004085.1| 1708990 1709436 1 + 447 Mobile element protein - none -
fig|6666666.67506.peg.1474 CDS gi|448276180|gb|CP004085.1| 1709502 1709897 3 + 396 Mobile element protein - none -
fig|6666666.67506.peg.1475 CDS gi|448276180|gb|CP004085.1| 1711180 1710443 -1 - 738 hypothetical protein - none -
fig|6666666.67506.peg.1476 CDS gi|448276180|gb|CP004085.1| 1711474 1712961 1 + 1488 Sodium/glycine symporter GlyP Glycine cleavage system
fig|6666666.67506.peg.1477 CDS gi|448276180|gb|CP004085.1| 1713706 1713128 -1 - 579 hypothetical protein - none -
fig|6666666.67506.peg.1478 CDS gi|448276180|gb|CP004085.1| 1715107 1713803 -1 - 1305 C4-dicarboxylate transporter DcuA - none -
fig|6666666.67506.peg.1479 CDS gi|448276180|gb|CP004085.1| 1715093 1715251 2 + 159 hypothetical protein - none -
fig|6666666.67506.peg.1480 CDS gi|448276180|gb|CP004085.1| 1715843 1716220 2 + 378 hypothetical protein - none -
fig|6666666.67506.peg.1481 CDS gi|448276180|gb|CP004085.1| 1717935 1716847 -3 - 1089 FIG00546046: hypothetical protein - none -
fig|6666666.67506.peg.1482 CDS gi|448276180|gb|CP004085.1| 1718506 1717970 -1 - 537 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67506.peg.1483 CDS gi|448276180|gb|CP004085.1| 1719533 1718631 -2 - 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67506.peg.1484 CDS gi|448276180|gb|CP004085.1| 1720252 1719563 -1 - 690 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67506.peg.1485 CDS gi|448276180|gb|CP004085.1| 1720303 1721985 1 + 1683 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.67506.peg.1486 CDS gi|448276180|gb|CP004085.1| 1722414 1725923 3 + 3510 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.67506.peg.1487 CDS gi|448276180|gb|CP004085.1| 1727056 1725920 -1 - 1137 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67506.peg.1488 CDS gi|448276180|gb|CP004085.1| 1727096 1727971 2 + 876 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67506.peg.1489 CDS gi|448276180|gb|CP004085.1| 1727995 1728816 1 + 822 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67506.peg.1490 CDS gi|448276180|gb|CP004085.1| 1730479 1728914 -1 - 1566 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67506.peg.1491 CDS gi|448276180|gb|CP004085.1| 1730719 1732413 1 + 1695 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67506.peg.1492 CDS gi|448276180|gb|CP004085.1| 1732477 1733250 1 + 774 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) - none -
fig|6666666.67506.peg.1493 CDS gi|448276180|gb|CP004085.1| 1733507 1735060 2 + 1554 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.67506.peg.1494 CDS gi|448276180|gb|CP004085.1| 1735064 1736551 2 + 1488 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.67506.peg.1495 CDS gi|448276180|gb|CP004085.1| 1737335 1736712 -2 - 624 hypothetical protein - none -
fig|6666666.67506.peg.1496 CDS gi|448276180|gb|CP004085.1| 1738228 1737335 -1 - 894 putative secreted protein - none -
fig|6666666.67506.peg.1497 CDS gi|448276180|gb|CP004085.1| 1739525 1738653 -2 - 873 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67506.peg.1498 CDS gi|448276180|gb|CP004085.1| 1744677 1739584 -3 - 5094 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67506.peg.1499 CDS gi|448276180|gb|CP004085.1| 1744713 1745501 3 + 789 inositol monophosphatase family protein - none -
fig|6666666.67506.peg.1500 CDS gi|448276180|gb|CP004085.1| 1745561 1746382 2 + 822 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.67506.peg.1501 CDS gi|448276180|gb|CP004085.1| 1746382 1747071 1 + 690 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67506.peg.1502 CDS gi|448276180|gb|CP004085.1| 1747346 1747723 2 + 378 Putative membrane protein (Fragment) - none -
fig|6666666.67506.peg.1503 CDS gi|448276180|gb|CP004085.1| 1747773 1749380 3 + 1608 putative transport protein - none -
fig|6666666.67506.peg.1504 CDS gi|448276180|gb|CP004085.1| 1749741 1750607 3 + 867 siderophore-interacting protein - none -
fig|6666666.67506.peg.1505 CDS gi|448276180|gb|CP004085.1| 1750849 1750661 -1 - 189 hypothetical protein - none -
fig|6666666.67506.peg.1506 CDS gi|448276180|gb|CP004085.1| 1751433 1752077 3 + 645 hypothetical protein - none -
fig|6666666.67506.peg.1507 CDS gi|448276180|gb|CP004085.1| 1752422 1752790 2 + 369 hypothetical protein - none -
fig|6666666.67506.peg.1508 CDS gi|448276180|gb|CP004085.1| 1752882 1753451 3 + 570 hypothetical protein - none -
fig|6666666.67506.peg.1509 CDS gi|448276180|gb|CP004085.1| 1757141 1754256 -2 - 2886 Mobile element protein - none -
fig|6666666.67506.peg.1510 CDS gi|448276180|gb|CP004085.1| 1758228 1757611 -3 - 618 Mobile element protein - none -
fig|6666666.67506.peg.1511 CDS gi|448276180|gb|CP004085.1| 1758714 1759295 3 + 582 Aminoglycoside 3@1-phosphotransferase (EC 2.7.1.95) Aminoglycoside phosphotransferase (antibiotic) cluster
fig|6666666.67506.peg.1512 CDS gi|448276180|gb|CP004085.1| 1759452 1760156 3 + 705 Mobile element protein - none -
fig|6666666.67506.peg.1513 CDS gi|448276180|gb|CP004085.1| 1760162 1760530 2 + 369 Resolvase/integrase Bin - none -
fig|6666666.67506.peg.1514 CDS gi|448276180|gb|CP004085.1| 1760980 1761399 1 + 420 Aminoglycoside 3@1-phosphotransferase (EC 2.7.1.95) Aminoglycoside phosphotransferase (antibiotic) cluster
fig|6666666.67506.peg.1515 CDS gi|448276180|gb|CP004085.1| 1761492 1762235 3 + 744 Aminoglycoside 3@1-phosphotransferase 2 (EC 2.7.1.95) @ Streptomycin 3@1-kinase StrB (EC 2.7.1.87) Aminoglycoside phosphotransferase (antibiotic) cluster
fig|6666666.67506.peg.1516 CDS gi|448276180|gb|CP004085.1| 1763614 1762439 -1 - 1176 Chloramphenicol resistance protein - none -
fig|6666666.67506.peg.1517 CDS gi|448276180|gb|CP004085.1| 1763868 1765211 3 + 1344 putative transposase - none -
fig|6666666.67506.peg.1518 CDS gi|448276180|gb|CP004085.1| 1765391 1765549 2 + 159 hypothetical protein - none -
fig|6666666.67506.peg.1519 CDS gi|448276180|gb|CP004085.1| 1766223 1765546 -3 - 678 FMN reductase (EC 1.5.1.29) Alkanesulfonates Utilization
fig|6666666.67506.peg.1520 CDS gi|448276180|gb|CP004085.1| 1767396 1766278 -3 - 1119 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67506.peg.1521 CDS gi|448276180|gb|CP004085.1| 1767473 1768357 2 + 885 putative methyltransferase - none -
fig|6666666.67506.peg.1522 CDS gi|448276180|gb|CP004085.1| 1769168 1768371 -2 - 798 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.1523 CDS gi|448276180|gb|CP004085.1| 1770119 1769229 -2 - 891 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67506.peg.1524 CDS gi|448276180|gb|CP004085.1| 1770266 1771204 2 + 939 ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.1525 CDS gi|448276180|gb|CP004085.1| 1771201 1772385 1 + 1185 putative ABC transporter - none -
fig|6666666.67506.peg.1526 CDS gi|448276180|gb|CP004085.1| 1773316 1772507 -1 - 810 putative iron transporter ATP-binding protein - none -
fig|6666666.67506.peg.1527 CDS gi|448276180|gb|CP004085.1| 1774365 1773313 -3 - 1053 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) - none -
fig|6666666.67506.peg.1528 CDS gi|448276180|gb|CP004085.1| 1775375 1774362 -2 - 1014 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.67506.peg.1529 CDS gi|448276180|gb|CP004085.1| 1776428 1775475 -2 - 954 iron-siderophore binding lipoprotein - none -
fig|6666666.67506.peg.1530 CDS gi|448276180|gb|CP004085.1| 1777171 1776812 -1 - 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67506.peg.1531 CDS gi|448276180|gb|CP004085.1| 1778620 1777337 -1 - 1284 Citrate synthase (si) (EC 2.3.3.1) Glyoxylate bypass;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67506.peg.1532 CDS gi|448276180|gb|CP004085.1| 1779002 1780141 2 + 1140 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67506.peg.1533 CDS gi|448276180|gb|CP004085.1| 1780331 1781533 2 + 1203 FIG00545091: hypothetical protein - none -
fig|6666666.67506.peg.1534 CDS gi|448276180|gb|CP004085.1| 1781559 1782530 3 + 972 FIG00544583: hypothetical protein - none -
fig|6666666.67506.peg.1535 CDS gi|448276180|gb|CP004085.1| 1783313 1782570 -2 - 744 putative rRNA methylase - none -
fig|6666666.67506.peg.1536 CDS gi|448276180|gb|CP004085.1| 1784914 1783430 -1 - 1485 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67506.peg.1537 CDS gi|448276180|gb|CP004085.1| 1785940 1785122 -1 - 819 FIG00546806: hypothetical protein - none -
fig|6666666.67506.peg.1538 CDS gi|448276180|gb|CP004085.1| 1785981 1786796 3 + 816 glutamine cyclotransferase - none -
fig|6666666.67506.peg.1539 CDS gi|448276180|gb|CP004085.1| 1786913 1787563 2 + 651 FIG00545981: hypothetical protein - none -
fig|6666666.67506.peg.1540 CDS gi|448276180|gb|CP004085.1| 1788014 1787631 -2 - 384 Cold shock protein CspC Cold shock, CspA family of proteins
fig|6666666.67506.peg.1541 CDS gi|448276180|gb|CP004085.1| 1788567 1789199 3 + 633 FIG00996461: hypothetical protein - none -
fig|6666666.67506.peg.1542 CDS gi|448276180|gb|CP004085.1| 1789564 1789373 -1 - 192 FIG00543815: hypothetical protein - none -
fig|6666666.67506.peg.1543 CDS gi|448276180|gb|CP004085.1| 1789702 1792128 1 + 2427 FIG00545438: hypothetical protein - none -
fig|6666666.67506.peg.1544 CDS gi|448276180|gb|CP004085.1| 1792253 1793833 2 + 1581 DNA repair helicase - none -
fig|6666666.67506.peg.1545 CDS gi|448276180|gb|CP004085.1| 1795631 1793850 -2 - 1782 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1546 CDS gi|448276180|gb|CP004085.1| 1797543 1796572 -3 - 972 putative transcriptional regulator (LysR family) - none -
fig|6666666.67506.peg.1547 CDS gi|448276180|gb|CP004085.1| 1797547 1799217 1 + 1671 DNA repair helicase - none -
fig|6666666.67506.peg.1548 CDS gi|448276180|gb|CP004085.1| 1799239 1799910 1 + 672 FIG00544717: hypothetical protein - none -
fig|6666666.67506.peg.1549 CDS gi|448276180|gb|CP004085.1| 1800035 1800487 2 + 453 Transcriptional regulator, MarR family - none -
fig|6666666.67506.peg.1550 CDS gi|448276180|gb|CP004085.1| 1800630 1801394 3 + 765 Lactam utilization protein LamB CBSS-279010.5.peg.587;
EC699-706
fig|6666666.67506.peg.1551 CDS gi|448276180|gb|CP004085.1| 1801391 1803082 2 + 1692 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) CBSS-279010.5.peg.587;
CBSS-279010.5.peg.587;
EC699-706;
EC699-706
fig|6666666.67506.peg.1552 CDS gi|448276180|gb|CP004085.1| 1803079 1804884 1 + 1806 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67506.peg.1553 CDS gi|448276180|gb|CP004085.1| 1805054 1805671 2 + 618 Transcriptional regulator, GntR family - none -
fig|6666666.67506.peg.1554 CDS gi|448276180|gb|CP004085.1| 1806561 1805746 -3 - 816 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase CBSS-279010.5.peg.587
fig|6666666.67506.peg.1555 CDS gi|448276180|gb|CP004085.1| 1807826 1806552 -2 - 1275 FIG00545033: hypothetical protein - none -
fig|6666666.67506.peg.1556 CDS gi|448276180|gb|CP004085.1| 1809062 1808028 -2 - 1035 FIG00546042: hypothetical protein - none -
fig|6666666.67506.peg.1557 CDS gi|448276180|gb|CP004085.1| 1809234 1810439 3 + 1206 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.67506.peg.1558 CDS gi|448276180|gb|CP004085.1| 1812032 1810515 -2 - 1518 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67506.peg.1559 CDS gi|448276180|gb|CP004085.1| 1814951 1812177 -2 - 2775 ABC-type transporter, permease component - none -
fig|6666666.67506.peg.1560 CDS gi|448276180|gb|CP004085.1| 1815721 1814951 -1 - 771 putative ABC transporter ATP-binding protein - none -
fig|6666666.67506.peg.1561 CDS gi|448276180|gb|CP004085.1| 1823312 1822104 -2 - 1209 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67506.peg.1562 CDS gi|448276180|gb|CP004085.1| 1824345 1823470 -3 - 876 Putative transcriptional regulator - none -
fig|6666666.67506.peg.1563 CDS gi|448276180|gb|CP004085.1| 1825226 1824681 -2 - 546 FIG00544325: hypothetical protein - none -
fig|6666666.67506.peg.1564 CDS gi|448276180|gb|CP004085.1| 1826075 1825302 -2 - 774 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.1565 CDS gi|448276180|gb|CP004085.1| 1826292 1827227 3 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67506.peg.1566 CDS gi|448276180|gb|CP004085.1| 1827450 1828154 3 + 705 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67506.peg.1567 CDS gi|448276180|gb|CP004085.1| 1828451 1828158 -2 - 294 predicted acetyltransferase - none -
fig|6666666.67506.peg.1568 CDS gi|448276180|gb|CP004085.1| 1831555 1830206 -1 - 1350 Mobile element protein - none -
fig|6666666.67506.peg.1569 CDS gi|448276180|gb|CP004085.1| 1831922 1832557 2 + 636 Mobile element protein - none -
fig|6666666.67506.peg.1570 CDS gi|448276180|gb|CP004085.1| 1834002 1832623 -3 - 1380 Mobile element protein - none -
fig|6666666.67506.peg.1571 CDS gi|448276180|gb|CP004085.1| 1835241 1834318 -3 - 924 hypothetical protein - none -
fig|6666666.67506.peg.1572 CDS gi|448276180|gb|CP004085.1| 1835569 1835363 -1 - 207 hypothetical protein - none -
fig|6666666.67506.peg.1573 CDS gi|448276180|gb|CP004085.1| 1837053 1836130 -3 - 924 Hydrolases of the alpha/beta superfamily - none -
fig|6666666.67506.peg.1574 CDS gi|448276180|gb|CP004085.1| 1839550 1838045 -1 - 1506 putative coenzyme A transferase - none -
fig|6666666.67506.peg.1575 CDS gi|448276180|gb|CP004085.1| 1839530 1839646 2 + 117 hypothetical protein - none -
fig|6666666.67506.peg.1576 CDS gi|448276180|gb|CP004085.1| 1839786 1840964 3 + 1179 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67506.peg.1577 CDS gi|448276180|gb|CP004085.1| 1841592 1841035 -3 - 558 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67506.peg.1578 CDS gi|448276180|gb|CP004085.1| 1842802 1841651 -1 - 1152 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67506.peg.1579 CDS gi|448276180|gb|CP004085.1| 1843874 1842855 -2 - 1020 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67506.peg.1580 CDS gi|448276180|gb|CP004085.1| 1844014 1844883 1 + 870 FIG00544976: hypothetical protein - none -
fig|6666666.67506.peg.1581 CDS gi|448276180|gb|CP004085.1| 1844885 1845640 2 + 756 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67506.peg.1582 CDS gi|448276180|gb|CP004085.1| 1846543 1845653 -1 - 891 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67506.peg.1583 CDS gi|448276180|gb|CP004085.1| 1846731 1847906 3 + 1176 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67506.peg.1584 CDS gi|448276180|gb|CP004085.1| 1848125 1848298 2 + 174 FIG00544089: hypothetical protein - none -
fig|6666666.67506.peg.1585 CDS gi|448276180|gb|CP004085.1| 1849532 1848465 -2 - 1068 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1586 CDS gi|448276180|gb|CP004085.1| 1851187 1849583 -1 - 1605 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1587 CDS gi|448276180|gb|CP004085.1| 1851212 1851325 2 + 114 hypothetical protein - none -
fig|6666666.67506.peg.1588 CDS gi|448276180|gb|CP004085.1| 1851800 1852864 2 + 1065 acyl-CoA hydrolase - none -
fig|6666666.67506.peg.1589 CDS gi|448276180|gb|CP004085.1| 1852914 1854224 3 + 1311 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67506.peg.1590 CDS gi|448276180|gb|CP004085.1| 1854295 1854954 1 + 660 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.67506.peg.1591 CDS gi|448276180|gb|CP004085.1| 1857456 1854994 -3 - 2463 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1592 CDS gi|448276180|gb|CP004085.1| 1858183 1857515 -1 - 669 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1593 CDS gi|448276180|gb|CP004085.1| 1858425 1858180 -3 - 246 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1594 CDS gi|448276180|gb|CP004085.1| 1860800 1858584 -2 - 2217 Protease II (EC 3.4.21.83) - none -
fig|6666666.67506.peg.1595 CDS gi|448276180|gb|CP004085.1| 1861182 1861997 3 + 816 Putative secreted hydrolase - none -
fig|6666666.67506.peg.1596 CDS gi|448276180|gb|CP004085.1| 1863103 1862210 -1 - 894 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1597 CDS gi|448276180|gb|CP004085.1| 1864388 1863171 -2 - 1218 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67506.peg.1598 CDS gi|448276180|gb|CP004085.1| 1864853 1864434 -2 - 420 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.67506.peg.1599 CDS gi|448276180|gb|CP004085.1| 1866335 1864902 -2 - 1434 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67506.peg.1600 CDS gi|448276180|gb|CP004085.1| 1867287 1866400 -3 - 888 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67506.peg.1601 CDS gi|448276180|gb|CP004085.1| 1868598 1867321 -3 - 1278 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1602 CDS gi|448276180|gb|CP004085.1| 1868691 1869128 3 + 438 HIT family protein - none -
fig|6666666.67506.peg.1603 CDS gi|448276180|gb|CP004085.1| 1871443 1869953 -1 - 1491 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67506.peg.1604 CDS gi|448276180|gb|CP004085.1| 1872325 1871555 -1 - 771 two-component system, response regulator - none -
fig|6666666.67506.peg.1605 CDS gi|448276180|gb|CP004085.1| 1872546 1873352 3 + 807 Putative secreted protein - none -
fig|6666666.67506.peg.1606 CDS gi|448276180|gb|CP004085.1| 1873453 1873983 1 + 531 putative acetyltransferase - none -
fig|6666666.67506.peg.1607 CDS gi|448276180|gb|CP004085.1| 1875777 1874014 -3 - 1764 putative alkaline phosphatase - none -
fig|6666666.67506.peg.1608 CDS gi|448276180|gb|CP004085.1| 1875995 1875777 -2 - 219 putative phosphatase - none -
fig|6666666.67506.peg.1609 CDS gi|448276180|gb|CP004085.1| 1877149 1877736 1 + 588 SAM-dependent methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67506.peg.1610 CDS gi|448276180|gb|CP004085.1| 1879420 1880814 1 + 1395 TOMM biosynthesis docking scaffold (protein D) - none -
fig|6666666.67506.peg.1611 CDS gi|448276180|gb|CP004085.1| 1881489 1881659 3 + 171 TOMM biosynthesis dehydrogenase (protein B) - none -
fig|6666666.67506.peg.1612 CDS gi|448276180|gb|CP004085.1| 1882472 1882639 2 + 168 transposase for IS3525 - none -
fig|6666666.67506.peg.1613 CDS gi|448276180|gb|CP004085.1| 1883370 1883495 3 + 126 hypothetical protein - none -
fig|6666666.67506.peg.1614 CDS gi|448276180|gb|CP004085.1| 1883555 1883668 2 + 114 hypothetical protein - none -
fig|6666666.67506.peg.1615 CDS gi|448276180|gb|CP004085.1| 1883922 1884239 3 + 318 Mobile element protein - none -
fig|6666666.67506.peg.1616 CDS gi|448276180|gb|CP004085.1| 1884276 1885271 3 + 996 Mobile element protein - none -
fig|6666666.67506.peg.1617 CDS gi|448276180|gb|CP004085.1| 1886692 1887009 1 + 318 Mobile element protein - none -
fig|6666666.67506.peg.1618 CDS gi|448276180|gb|CP004085.1| 1887006 1887920 3 + 915 Mobile element protein - none -
fig|6666666.67506.peg.1619 CDS gi|448276180|gb|CP004085.1| 1888260 1888922 3 + 663 Mobile element protein - none -
fig|6666666.67506.peg.1620 CDS gi|448276180|gb|CP004085.1| 1888933 1889406 1 + 474 Mobile element protein - none -
fig|6666666.67506.peg.1621 CDS gi|448276180|gb|CP004085.1| 1889778 1891376 3 + 1599 Putative amino acid export carrier protein - none -
fig|6666666.67506.peg.1622 CDS gi|448276180|gb|CP004085.1| 1891516 1891866 1 + 351 Putative uncharacterized protein - none -
fig|6666666.67506.peg.1623 CDS gi|448276180|gb|CP004085.1| 1891921 1893480 1 + 1560 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.67506.peg.1624 CDS gi|448276180|gb|CP004085.1| 1893480 1893992 3 + 513 FIG00544334: hypothetical protein - none -
fig|6666666.67506.peg.1625 CDS gi|448276180|gb|CP004085.1| 1894056 1895009 3 + 954 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67506.peg.1626 CDS gi|448276180|gb|CP004085.1| 1896137 1894998 -2 - 1140 Transcriptional regulator, LacI family - none -
fig|6666666.67506.peg.1627 CDS gi|448276180|gb|CP004085.1| 1896245 1897327 2 + 1083 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67506.peg.1628 CDS gi|448276180|gb|CP004085.1| 1897324 1898025 1 + 702 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67506.peg.1629 CDS gi|448276180|gb|CP004085.1| 1898022 1899029 3 + 1008 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67506.peg.1630 CDS gi|448276180|gb|CP004085.1| 1900068 1899115 -3 - 954 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67506.peg.1631 CDS gi|448276180|gb|CP004085.1| 1900753 1900163 -1 - 591 Putative thiamine biosynthesis related protein - none -
fig|6666666.67506.peg.1632 CDS gi|448276180|gb|CP004085.1| 1901093 1901902 2 + 810 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1633 CDS gi|448276180|gb|CP004085.1| 1901892 1903079 3 + 1188 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1634 CDS gi|448276180|gb|CP004085.1| 1903079 1903855 2 + 777 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1635 CDS gi|448276180|gb|CP004085.1| 1903878 1904549 3 + 672 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67506.peg.1636 CDS gi|448276180|gb|CP004085.1| 1906103 1904604 -2 - 1500 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67506.peg.1637 CDS gi|448276180|gb|CP004085.1| 1906266 1907096 3 + 831 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67506.peg.1638 CDS gi|448276180|gb|CP004085.1| 1907215 1907499 1 + 285 hypothetical protein - none -
fig|6666666.67506.peg.1639 CDS gi|448276180|gb|CP004085.1| 1907956 1907468 -1 - 489 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67506.peg.1640 CDS gi|448276180|gb|CP004085.1| 1908799 1908002 -1 - 798 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67506.peg.1641 CDS gi|448276180|gb|CP004085.1| 1909434 1908862 -3 - 573 CarD-like transcriptional regulator - none -
fig|6666666.67506.peg.1642 CDS gi|448276180|gb|CP004085.1| 1909437 1909589 3 + 153 hypothetical protein - none -
fig|6666666.67506.peg.1643 CDS gi|448276180|gb|CP004085.1| 1909772 1910329 2 + 558 FIG00544037: hypothetical protein - none -
fig|6666666.67506.peg.1644 CDS gi|448276180|gb|CP004085.1| 1910474 1911865 2 + 1392 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67506.peg.1645 CDS gi|448276180|gb|CP004085.1| 1912636 1911869 -1 - 768 FIG00544149: hypothetical protein - none -
fig|6666666.67506.peg.1646 CDS gi|448276180|gb|CP004085.1| 1913496 1912786 -3 - 711 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.67506.peg.1647 CDS gi|448276180|gb|CP004085.1| 1913688 1914671 3 + 984 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67506.peg.1648 CDS gi|448276180|gb|CP004085.1| 1914857 1914699 -2 - 159 hypothetical protein - none -
fig|6666666.67506.peg.1649 CDS gi|448276180|gb|CP004085.1| 1914861 1916252 3 + 1392 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67506.peg.1650 CDS gi|448276180|gb|CP004085.1| 1916337 1917710 3 + 1374 Triacylglycerol lipase precursor (EC 3.1.1.3) Triacylglycerol metabolism
fig|6666666.67506.peg.1651 CDS gi|448276180|gb|CP004085.1| 1920624 1917940 -3 - 2685 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67506.peg.1652 CDS gi|448276180|gb|CP004085.1| 1921025 1922800 2 + 1776 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.1653 CDS gi|448276180|gb|CP004085.1| 1924551 1922944 -3 - 1608 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.67506.peg.1654 CDS gi|448276180|gb|CP004085.1| 1925995 1924790 -1 - 1206 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.67506.peg.1655 CDS gi|448276180|gb|CP004085.1| 1927461 1926061 -3 - 1401 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.67506.peg.1656 CDS gi|448276180|gb|CP004085.1| 1929249 1927654 -3 - 1596 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67506.peg.1657 CDS gi|448276180|gb|CP004085.1| 1930596 1929388 -3 - 1209 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.67506.peg.1658 CDS gi|448276180|gb|CP004085.1| 1931128 1930634 -1 - 495 Nitrite-sensitive transcriptional repressor NsrR Nitrosative stress;
Oxidative stress
fig|6666666.67506.peg.1659 CDS gi|448276180|gb|CP004085.1| 1931691 1931272 -3 - 420 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67506.peg.1660 CDS gi|448276180|gb|CP004085.1| 1932703 1931711 -1 - 993 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67506.peg.1661 CDS gi|448276180|gb|CP004085.1| 1933656 1932709 -3 - 948 FIG173306: hypothetical protein - none -
fig|6666666.67506.peg.1662 CDS gi|448276180|gb|CP004085.1| 1934921 1933704 -2 - 1218 FIG00544686: hypothetical protein - none -
fig|6666666.67506.peg.1663 CDS gi|448276180|gb|CP004085.1| 1935424 1934948 -1 - 477 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67506.peg.1664 CDS gi|448276180|gb|CP004085.1| 1936103 1935435 -2 - 669 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67506.peg.1665 CDS gi|448276180|gb|CP004085.1| 1936485 1936108 -3 - 378 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67506.peg.1666 CDS gi|448276180|gb|CP004085.1| 1937431 1936478 -1 - 954 Dihydropteroate synthase (EC 2.5.1.15) Aminoglycoside phosphotransferase (antibiotic) cluster;
Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67506.peg.1667 CDS gi|448276180|gb|CP004085.1| 1938118 1937504 -1 - 615 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.1668 CDS gi|448276180|gb|CP004085.1| 1940652 1938139 -3 - 2514 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67506.peg.1669 CDS gi|448276180|gb|CP004085.1| 1941333 1940731 -3 - 603 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67506.peg.1670 CDS gi|448276180|gb|CP004085.1| 1942579 1941326 -1 - 1254 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67506.peg.1671 CDS gi|448276180|gb|CP004085.1| 1944015 1942639 -3 - 1377 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1672 CDS gi|448276180|gb|CP004085.1| 1944159 1944641 3 + 483 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67506.peg.1673 CDS gi|448276180|gb|CP004085.1| 1945754 1946089 2 + 336 rhodanese-related sulfurtransferase - none -
fig|6666666.67506.peg.1674 CDS gi|448276180|gb|CP004085.1| 1946274 1946531 3 + 258 hypothetical protein - none -
fig|6666666.67506.peg.1675 CDS gi|448276180|gb|CP004085.1| 1946883 1947911 3 + 1029 oxidoreductase - none -
fig|6666666.67506.peg.1676 CDS gi|448276180|gb|CP004085.1| 1948930 1948031 -1 - 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67506.peg.1677 CDS gi|448276180|gb|CP004085.1| 1949502 1949852 3 + 351 hypothetical protein - none -
fig|6666666.67506.peg.1678 CDS gi|448276180|gb|CP004085.1| 1950234 1950121 -3 - 114 hypothetical protein - none -
fig|6666666.67506.peg.1679 CDS gi|448276180|gb|CP004085.1| 1950612 1950373 -3 - 240 hypothetical protein - none -
fig|6666666.67506.peg.1680 CDS gi|448276180|gb|CP004085.1| 1952845 1951202 -1 - 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67506.peg.1681 CDS gi|448276180|gb|CP004085.1| 1952882 1954477 2 + 1596 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67506.peg.1682 CDS gi|448276180|gb|CP004085.1| 1954482 1956410 3 + 1929 putative carboxylesterase - none -
fig|6666666.67506.peg.1683 CDS gi|448276180|gb|CP004085.1| 1956777 1957376 3 + 600 FIG00546460: hypothetical protein - none -
fig|6666666.67506.peg.1684 CDS gi|448276180|gb|CP004085.1| 1958801 1957617 -2 - 1185 Putative cytoplasmic protein - none -
fig|6666666.67506.peg.1685 CDS gi|448276180|gb|CP004085.1| 1960072 1958930 -1 - 1143 hypothetical protein - none -
fig|6666666.67506.peg.1686 CDS gi|448276180|gb|CP004085.1| 1960046 1960390 2 + 345 hypothetical protein - none -
fig|6666666.67506.peg.1687 CDS gi|448276180|gb|CP004085.1| 1960431 1961111 3 + 681 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67506.peg.1688 CDS gi|448276180|gb|CP004085.1| 1961130 1962296 3 + 1167 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67506.peg.1689 CDS gi|448276180|gb|CP004085.1| 1962395 1963171 2 + 777 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67506.peg.1690 CDS gi|448276180|gb|CP004085.1| 1963193 1964704 2 + 1512 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.1691 CDS gi|448276180|gb|CP004085.1| 1964856 1965401 3 + 546 putative transcriptional regulator (MarR family) - none -
fig|6666666.67506.peg.1692 CDS gi|448276180|gb|CP004085.1| 1966659 1965451 -3 - 1209 permeases of the major facilitator superfamily - none -
fig|6666666.67506.peg.1693 CDS gi|448276180|gb|CP004085.1| 1967565 1966744 -3 - 822 Putative ABC transport system membrane protein - none -
fig|6666666.67506.peg.1694 CDS gi|448276180|gb|CP004085.1| 1968613 1967573 -1 - 1041 ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.1695 CDS gi|448276180|gb|CP004085.1| 1968749 1970200 2 + 1452 FIG00543876: hypothetical protein - none -
fig|6666666.67506.peg.1696 CDS gi|448276180|gb|CP004085.1| 1970200 1971348 1 + 1149 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67506.peg.1697 CDS gi|448276180|gb|CP004085.1| 1971352 1973895 1 + 2544 serine/threonine protein kinase - none -
fig|6666666.67506.peg.1698 CDS gi|448276180|gb|CP004085.1| 1974025 1974861 1 + 837 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) - none -
fig|6666666.67506.peg.1699 CDS gi|448276180|gb|CP004085.1| 1974858 1975664 3 + 807 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) - none -
fig|6666666.67506.peg.1700 CDS gi|448276180|gb|CP004085.1| 1975733 1976245 2 + 513 Molybdenum cofactor biosynthesis protein MoaC ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67506.peg.1701 CDS gi|448276180|gb|CP004085.1| 1976232 1977404 3 + 1173 Molybdenum cofactor biosynthesis protein MoaB / Molybdenum cofactor biosynthesis protein MoaE ar-104-EC Molybdenum cofactor biosynthesis moaABCDE;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67506.peg.1702 CDS gi|448276180|gb|CP004085.1| 1977770 1979062 2 + 1293 FIG00547801: hypothetical protein - none -
fig|6666666.67506.peg.1703 CDS gi|448276180|gb|CP004085.1| 1980678 1979437 -3 - 1242 Acetate kinase (EC 2.7.2.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.1704 CDS gi|448276180|gb|CP004085.1| 1982160 1980739 -3 - 1422 Phosphate acetyltransferase (EC 2.3.1.8) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.1705 CDS gi|448276180|gb|CP004085.1| 1983569 1982499 -2 - 1071 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67506.peg.1706 CDS gi|448276180|gb|CP004085.1| 1984336 1983566 -1 - 771 FIG01282784: hypothetical protein - none -
fig|6666666.67506.peg.1707 CDS gi|448276180|gb|CP004085.1| 1985685 1984336 -3 - 1350 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67506.peg.1708 CDS gi|448276180|gb|CP004085.1| 1986647 1985685 -2 - 963 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67506.peg.1709 CDS gi|448276180|gb|CP004085.1| 1987495 1986644 -1 - 852 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation;
Inorganic Sulfur Assimilation
fig|6666666.67506.peg.1710 CDS gi|448276180|gb|CP004085.1| 1987819 1989201 1 + 1383 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.67506.peg.1711 CDS gi|448276180|gb|CP004085.1| 1989293 1990795 2 + 1503 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67506.peg.1712 CDS gi|448276180|gb|CP004085.1| 1991725 1992765 1 + 1041 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.67506.peg.1713 CDS gi|448276180|gb|CP004085.1| 1994525 1992900 -2 - 1626 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.1714 CDS gi|448276180|gb|CP004085.1| 1995583 1996254 1 + 672 hypothetical protein - none -
fig|6666666.67506.peg.1715 CDS gi|448276180|gb|CP004085.1| 1996402 1997208 1 + 807 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67506.peg.1716 CDS gi|448276180|gb|CP004085.1| 1997265 1998503 3 + 1239 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.67506.peg.1717 CDS gi|448276180|gb|CP004085.1| 1998541 1999623 1 + 1083 Acyl-CoA dehydrogenase (EC 1.3.99.3) - none -
fig|6666666.67506.peg.1718 CDS gi|448276180|gb|CP004085.1| 1999675 2000964 1 + 1290 D-serine dehydratase (EC 4.3.1.18) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67506.peg.1719 CDS gi|448276180|gb|CP004085.1| 2002450 2001044 -1 - 1407 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67506.peg.1720 CDS gi|448276180|gb|CP004085.1| 2002771 2002562 -1 - 210 Ferredoxin-like protein involved in electron transfer Inorganic Sulfur Assimilation
fig|6666666.67506.peg.1721 CDS gi|448276180|gb|CP004085.1| 2004447 2002768 -3 - 1680 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.67506.peg.1722 CDS gi|448276180|gb|CP004085.1| 2004737 2006200 2 + 1464 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.67506.peg.1723 CDS gi|448276180|gb|CP004085.1| 2006387 2006941 2 + 555 ElaA protein cAMP signaling in bacteria
fig|6666666.67506.peg.1724 CDS gi|448276180|gb|CP004085.1| 2007842 2006949 -2 - 894 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67506.peg.1725 CDS gi|448276180|gb|CP004085.1| 2009223 2007910 -3 - 1314 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67506.peg.1726 CDS gi|448276180|gb|CP004085.1| 2009374 2009829 1 + 456 Putative iron-sulphur protein - none -
fig|6666666.67506.peg.1727 CDS gi|448276180|gb|CP004085.1| 2010955 2009867 -1 - 1089 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.67506.peg.1728 CDS gi|448276180|gb|CP004085.1| 2011652 2010960 -2 - 693 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.67506.peg.1729 CDS gi|448276180|gb|CP004085.1| 2012395 2011649 -1 - 747 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.1730 CDS gi|448276180|gb|CP004085.1| 2012851 2015133 1 + 2283 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67506.peg.1731 CDS gi|448276180|gb|CP004085.1| 2016836 2015238 -2 - 1599 hypothetical protein - none -
fig|6666666.67506.peg.1732 CDS gi|448276180|gb|CP004085.1| 2018178 2017006 -3 - 1173 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.1733 CDS gi|448276180|gb|CP004085.1| 2018302 2019531 1 + 1230 hypothetical protein - none -
fig|6666666.67506.peg.1734 CDS gi|448276180|gb|CP004085.1| 2019542 2021335 2 + 1794 hypothetical protein - none -
fig|6666666.67506.peg.1735 CDS gi|448276180|gb|CP004085.1| 2021669 2021971 2 + 303 Urease gamma subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67506.peg.1736 CDS gi|448276180|gb|CP004085.1| 2022032 2022343 2 + 312 Urease beta subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67506.peg.1737 CDS gi|448276180|gb|CP004085.1| 2022397 2024112 1 + 1716 Urease alpha subunit (EC 3.5.1.5) G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67506.peg.1738 CDS gi|448276180|gb|CP004085.1| 2024260 2024736 1 + 477 Urease accessory protein UreE G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67506.peg.1739 CDS gi|448276180|gb|CP004085.1| 2024717 2025511 2 + 795 Urease accessory protein UreF G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67506.peg.1740 CDS gi|448276180|gb|CP004085.1| 2025673 2026290 1 + 618 Urease accessory protein UreG G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67506.peg.1741 CDS gi|448276180|gb|CP004085.1| 2026294 2027178 1 + 885 Urease accessory protein UreD G3E family of P-loop GTPases (metallocenter biosynthesis);
Urea decomposition;
Urease subunits
fig|6666666.67506.peg.1742 CDS gi|448276180|gb|CP004085.1| 2027495 2027980 2 + 486 putative exported protein - none -
fig|6666666.67506.peg.1743 CDS gi|448276180|gb|CP004085.1| 2028343 2027981 -1 - 363 hypothetical protein - none -
fig|6666666.67506.peg.1744 CDS gi|448276180|gb|CP004085.1| 2029685 2028396 -2 - 1290 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67506.peg.1745 CDS gi|448276180|gb|CP004085.1| 2031074 2029737 -2 - 1338 sodium/glutamate symporter - none -
fig|6666666.67506.peg.1746 CDS gi|448276180|gb|CP004085.1| 2031176 2032054 2 + 879 FIG00545467: hypothetical protein - none -
fig|6666666.67506.peg.1747 CDS gi|448276180|gb|CP004085.1| 2033407 2032067 -1 - 1341 FIG00545517: hypothetical protein - none -
fig|6666666.67506.peg.1748 CDS gi|448276180|gb|CP004085.1| 2033902 2033441 -1 - 462 FIG00544477: hypothetical protein - none -
fig|6666666.67506.peg.1749 CDS gi|448276180|gb|CP004085.1| 2035011 2033977 -3 - 1035 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67506.peg.1750 CDS gi|448276180|gb|CP004085.1| 2036384 2035203 -2 - 1182 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67506.peg.1751 CDS gi|448276180|gb|CP004085.1| 2037164 2036433 -2 - 732 probable RNA methyltransferase - none -
fig|6666666.67506.peg.1752 CDS gi|448276180|gb|CP004085.1| 2038033 2037164 -1 - 870 FIG00549150: hypothetical protein - none -
fig|6666666.67506.peg.1753 CDS gi|448276180|gb|CP004085.1| 2038649 2038092 -2 - 558 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67506.peg.1754 CDS gi|448276180|gb|CP004085.1| 2039982 2038861 -3 - 1122 hypothetical protein - none -
fig|6666666.67506.peg.1755 CDS gi|448276180|gb|CP004085.1| 2041942 2040275 -1 - 1668 Putative secreted protein - none -
fig|6666666.67506.peg.1756 CDS gi|448276180|gb|CP004085.1| 2042425 2042042 -1 - 384 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67506.peg.1757 CDS gi|448276180|gb|CP004085.1| 2043882 2042692 -3 - 1191 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67506.peg.1758 CDS gi|448276180|gb|CP004085.1| 2046834 2043913 -3 - 2922 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67506.peg.1759 CDS gi|448276180|gb|CP004085.1| 2046941 2047810 2 + 870 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) CBSS-246196.1.peg.364;
Fatty Acid Biosynthesis FASII
fig|6666666.67506.peg.1760 CDS gi|448276180|gb|CP004085.1| 2048322 2047840 -3 - 483 hypothetical protein - none -
fig|6666666.67506.peg.1761 CDS gi|448276180|gb|CP004085.1| 2048935 2048357 -1 - 579 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.67506.peg.1762 CDS gi|448276180|gb|CP004085.1| 2049828 2048947 -3 - 882 putative thiosulfate sulfurtransferase - none -
fig|6666666.67506.peg.1763 CDS gi|448276180|gb|CP004085.1| 2049994 2051109 1 + 1116 hypothetical protein - none -
fig|6666666.67506.peg.1764 CDS gi|448276180|gb|CP004085.1| 2053825 2051243 -1 - 2583 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67506.peg.1765 CDS gi|448276180|gb|CP004085.1| 2054087 2055325 2 + 1239 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.67506.peg.1766 CDS gi|448276180|gb|CP004085.1| 2056241 2055336 -2 - 906 FIG00545709: hypothetical protein - none -
fig|6666666.67506.peg.1767 CDS gi|448276180|gb|CP004085.1| 2056308 2056427 3 + 120 hypothetical protein - none -
fig|6666666.67506.peg.1768 CDS gi|448276180|gb|CP004085.1| 2056463 2057020 2 + 558 hypothetical protein - none -
fig|6666666.67506.peg.1769 CDS gi|448276180|gb|CP004085.1| 2057020 2058309 1 + 1290 FIG00544569: hypothetical protein - none -
fig|6666666.67506.peg.1770 CDS gi|448276180|gb|CP004085.1| 2058382 2059911 1 + 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway
fig|6666666.67506.peg.1771 CDS gi|448276180|gb|CP004085.1| 2060456 2059998 -2 - 459 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67506.peg.1772 CDS gi|448276180|gb|CP004085.1| 2061688 2060483 -1 - 1206 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67506.peg.1773 CDS gi|448276180|gb|CP004085.1| 2061895 2062875 1 + 981 hypothetical protein - none -
fig|6666666.67506.peg.1774 CDS gi|448276180|gb|CP004085.1| 2064545 2063025 -2 - 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.1775 CDS gi|448276180|gb|CP004085.1| 2065496 2064834 -2 - 663 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67506.peg.1776 CDS gi|448276180|gb|CP004085.1| 2067349 2065496 -1 - 1854 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67506.peg.1777 CDS gi|448276180|gb|CP004085.1| 2067648 2068589 3 + 942 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67506.peg.1778 CDS gi|448276180|gb|CP004085.1| 2068807 2072043 1 + 3237 Fe-S oxidoreductase - none -
fig|6666666.67506.peg.1779 CDS gi|448276180|gb|CP004085.1| 2072912 2073796 2 + 885 hypothetical protein - none -
fig|6666666.67506.peg.1780 CDS gi|448276180|gb|CP004085.1| 2074426 2073806 -1 - 621 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) DNA Repair Base Excision
fig|6666666.67506.peg.1781 CDS gi|448276180|gb|CP004085.1| 2075486 2074467 -2 - 1020 FIG00548436: hypothetical protein - none -
fig|6666666.67506.peg.1782 CDS gi|448276180|gb|CP004085.1| 2075492 2075974 2 + 483 Mobile element protein - none -
fig|6666666.67506.peg.1783 CDS gi|448276180|gb|CP004085.1| 2076866 2075982 -2 - 885 Mobile element protein - none -
fig|6666666.67506.peg.1784 CDS gi|448276180|gb|CP004085.1| 2077174 2076863 -1 - 312 Mobile element protein - none -
fig|6666666.67506.peg.1785 CDS gi|448276180|gb|CP004085.1| 2078158 2077274 -1 - 885 Mobile element protein - none -
fig|6666666.67506.peg.1786 CDS gi|448276180|gb|CP004085.1| 2078448 2078155 -3 - 294 Mobile element protein - none -
fig|6666666.67506.peg.1787 CDS gi|448276180|gb|CP004085.1| 2078925 2078485 -3 - 441 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67506.peg.1788 CDS gi|448276180|gb|CP004085.1| 2078999 2079127 2 + 129 Mobile element protein - none -
fig|6666666.67506.peg.1789 CDS gi|448276180|gb|CP004085.1| 2080021 2079737 -1 - 285 hypothetical protein - none -
fig|6666666.67506.peg.1790 CDS gi|448276180|gb|CP004085.1| 2080396 2081424 1 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67506.peg.1791 CDS gi|448276180|gb|CP004085.1| 2081579 2081899 2 + 321 putative sodium/glutamate symporter - none -
fig|6666666.67506.peg.1792 CDS gi|448276180|gb|CP004085.1| 2082526 2082398 -1 - 129 Mobile element protein - none -
fig|6666666.67506.peg.1793 CDS gi|448276180|gb|CP004085.1| 2082676 2082840 1 + 165 Mobile element protein - none -
fig|6666666.67506.peg.1794 CDS gi|448276180|gb|CP004085.1| 2083168 2084034 1 + 867 hypothetical protein - none -
fig|6666666.67506.peg.1795 CDS gi|448276180|gb|CP004085.1| 2084080 2085324 1 + 1245 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67506.peg.1796 CDS gi|448276180|gb|CP004085.1| 2086886 2085408 -2 - 1479 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67506.peg.1797 CDS gi|448276180|gb|CP004085.1| 2087410 2086937 -1 - 474 Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming) - none -
fig|6666666.67506.peg.1798 CDS gi|448276180|gb|CP004085.1| 2087975 2089426 2 + 1452 putative integral membrane protein - none -
fig|6666666.67506.peg.1799 CDS gi|448276180|gb|CP004085.1| 2089531 2091093 1 + 1563 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.67506.peg.1800 CDS gi|448276180|gb|CP004085.1| 2092304 2091183 -2 - 1122 FIG00545174: hypothetical protein - none -
fig|6666666.67506.peg.1801 CDS gi|448276180|gb|CP004085.1| 2093965 2092541 -1 - 1425 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.67506.peg.1802 CDS gi|448276180|gb|CP004085.1| 2094357 2095481 3 + 1125 FIG00545899: hypothetical protein - none -
fig|6666666.67506.peg.1803 CDS gi|448276180|gb|CP004085.1| 2095545 2096873 3 + 1329 FIG00546951: hypothetical protein - none -
fig|6666666.67506.peg.1804 CDS gi|448276180|gb|CP004085.1| 2098129 2096870 -1 - 1260 putative permease of the major facilitator superfamily - none -
fig|6666666.67506.peg.1805 CDS gi|448276180|gb|CP004085.1| 2098235 2100319 2 + 2085 Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) - none -
fig|6666666.67506.peg.1806 CDS gi|448276180|gb|CP004085.1| 2100436 2102271 1 + 1836 hypothetical protein - none -
fig|6666666.67506.peg.1807 CDS gi|448276180|gb|CP004085.1| 2103382 2102261 -1 - 1122 hypothetical protein - none -
fig|6666666.67506.peg.1808 CDS gi|448276180|gb|CP004085.1| 2104900 2103605 -1 - 1296 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67506.peg.1809 CDS gi|448276180|gb|CP004085.1| 2105001 2106476 3 + 1476 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67506.peg.1810 CDS gi|448276180|gb|CP004085.1| 2109659 2106726 -2 - 2934 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67506.peg.1811 CDS gi|448276180|gb|CP004085.1| 2110167 2109964 -3 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67506.peg.1812 CDS gi|448276180|gb|CP004085.1| 2110396 2112834 1 + 2439 FIG00545284: hypothetical protein - none -
fig|6666666.67506.peg.1813 CDS gi|448276180|gb|CP004085.1| 2113282 2114745 1 + 1464 FIG00546254: hypothetical protein - none -
fig|6666666.67506.peg.1814 CDS gi|448276180|gb|CP004085.1| 2115244 2114939 -1 - 306 FIG00545374: hypothetical protein - none -
fig|6666666.67506.peg.1815 CDS gi|448276180|gb|CP004085.1| 2115542 2115222 -2 - 321 FIG00544831: hypothetical protein - none -
fig|6666666.67506.peg.1816 CDS gi|448276180|gb|CP004085.1| 2115818 2115543 -2 - 276 FIG01255695: hypothetical protein - none -
fig|6666666.67506.peg.1817 CDS gi|448276180|gb|CP004085.1| 2117130 2115970 -3 - 1161 FIG00544993: hypothetical protein - none -
fig|6666666.67506.peg.1818 CDS gi|448276180|gb|CP004085.1| 2118425 2117127 -2 - 1299 Flp pilus assembly protein, ATPase CpaF - none -
fig|6666666.67506.peg.1819 CDS gi|448276180|gb|CP004085.1| 2119800 2118412 -3 - 1389 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.67506.peg.1820 CDS gi|448276180|gb|CP004085.1| 2119850 2120665 2 + 816 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67506.peg.1821 CDS gi|448276180|gb|CP004085.1| 2121498 2120695 -3 - 804 FIG00544328: hypothetical protein - none -
fig|6666666.67506.peg.1822 CDS gi|448276180|gb|CP004085.1| 2121601 2122119 1 + 519 FIG00544230: hypothetical protein - none -
fig|6666666.67506.peg.1823 CDS gi|448276180|gb|CP004085.1| 2122262 2123074 2 + 813 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.67506.peg.1824 CDS gi|448276180|gb|CP004085.1| 2124291 2123098 -3 - 1194 putative serine protease - none -
fig|6666666.67506.peg.1825 CDS gi|448276180|gb|CP004085.1| 2125115 2124303 -2 - 813 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67506.peg.1826 CDS gi|448276180|gb|CP004085.1| 2125974 2125120 -3 - 855 FIG00544760: hypothetical protein - none -
fig|6666666.67506.peg.1827 CDS gi|448276180|gb|CP004085.1| 2126710 2125979 -1 - 732 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67506.peg.1828 CDS gi|448276180|gb|CP004085.1| 2126835 2127518 3 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67506.peg.1829 CDS gi|448276180|gb|CP004085.1| 2128558 2127695 -1 - 864 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67506.peg.1830 CDS gi|448276180|gb|CP004085.1| 2129084 2128593 -2 - 492 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67506.peg.1831 CDS gi|448276180|gb|CP004085.1| 2129254 2129087 -1 - 168 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67506.peg.1832 CDS gi|448276180|gb|CP004085.1| 2129808 2129425 -3 - 384 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67506.peg.1833 CDS gi|448276180|gb|CP004085.1| 2130368 2132512 2 + 2145 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1834 CDS gi|448276180|gb|CP004085.1| 2132647 2133720 1 + 1074 putative secreted protein - none -
fig|6666666.67506.peg.1835 CDS gi|448276180|gb|CP004085.1| 2134475 2137846 2 + 3372 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67506.peg.1836 CDS gi|448276180|gb|CP004085.1| 2137843 2138361 1 + 519 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67506.peg.1837 CDS gi|448276180|gb|CP004085.1| 2138361 2140127 3 + 1767 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67506.peg.1838 CDS gi|448276180|gb|CP004085.1| 2140127 2140837 2 + 711 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67506.peg.1839 CDS gi|448276180|gb|CP004085.1| 2140838 2141116 2 + 279 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67506.peg.1840 CDS gi|448276180|gb|CP004085.1| 2141120 2141551 2 + 432 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67506.peg.1841 CDS gi|448276180|gb|CP004085.1| 2142078 2141653 -3 - 426 Organic hydroperoxide resistance protein CBSS-269482.1.peg.1294;
Oxidative stress
fig|6666666.67506.peg.1842 CDS gi|448276180|gb|CP004085.1| 2143746 2142130 -3 - 1617 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67506.peg.1843 CDS gi|448276180|gb|CP004085.1| 2143858 2144637 1 + 780 RNA polymerase sigma factor - none -
fig|6666666.67506.peg.1844 CDS gi|448276180|gb|CP004085.1| 2144684 2146168 2 + 1485 Cell division inhibitor Persister Cells
fig|6666666.67506.peg.1845 CDS gi|448276180|gb|CP004085.1| 2146172 2147437 2 + 1266 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67506.peg.1846 CDS gi|448276180|gb|CP004085.1| 2147582 2149138 2 + 1557 hypothetical protein - none -
fig|6666666.67506.peg.1847 CDS gi|448276180|gb|CP004085.1| 2150400 2149363 -3 - 1038 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67506.peg.1848 CDS gi|448276180|gb|CP004085.1| 2151719 2150454 -2 - 1266 Aspartokinase (EC 2.7.2.4) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67506.peg.1849 CDS gi|448276180|gb|CP004085.1| 2151889 2152734 1 + 846 FIG00544278: hypothetical protein - none -
fig|6666666.67506.peg.1850 CDS gi|448276180|gb|CP004085.1| 2152837 2154612 1 + 1776 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67506.peg.1851 CDS gi|448276180|gb|CP004085.1| 2154767 2157181 2 + 2415 FIG00544909: hypothetical protein - none -
fig|6666666.67506.peg.1852 CDS gi|448276180|gb|CP004085.1| 2157218 2159542 2 + 2325 FIG00543990: hypothetical protein - none -
fig|6666666.67506.peg.1853 CDS gi|448276180|gb|CP004085.1| 2163197 2159919 -2 - 3279 FIG00547033: hypothetical protein - none -
fig|6666666.67506.peg.1854 CDS gi|448276180|gb|CP004085.1| 2164069 2163203 -1 - 867 Putative surface anchored protein - none -
fig|6666666.67506.peg.1855 CDS gi|448276180|gb|CP004085.1| 2164979 2164041 -2 - 939 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67506.peg.1856 CDS gi|448276180|gb|CP004085.1| 2166538 2165078 -1 - 1461 Cell wall surface anchor family protein Sortase
fig|6666666.67506.peg.1857 CDS gi|448276180|gb|CP004085.1| 2167076 2168065 2 + 990 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67506.peg.1858 CDS gi|448276180|gb|CP004085.1| 2168105 2169019 2 + 915 hypothetical protein - none -
fig|6666666.67506.peg.1859 CDS gi|448276180|gb|CP004085.1| 2169343 2171184 1 + 1842 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67506.peg.1860 CDS gi|448276180|gb|CP004085.1| 2171813 2173288 2 + 1476 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67506.peg.1861 CDS gi|448276180|gb|CP004085.1| 2173278 2174849 3 + 1572 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67506.peg.1862 CDS gi|448276180|gb|CP004085.1| 2174849 2175970 2 + 1122 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67506.peg.1863 CDS gi|448276180|gb|CP004085.1| 2176236 2177255 3 + 1020 monooxygenase, putative - none -
fig|6666666.67506.peg.1864 CDS gi|448276180|gb|CP004085.1| 2178377 2177556 -2 - 822 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67506.peg.1865 CDS gi|448276180|gb|CP004085.1| 2178769 2178467 -1 - 303 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67506.peg.1866 CDS gi|448276180|gb|CP004085.1| 2182178 2178903 -2 - 3276 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67506.peg.1867 CDS gi|448276180|gb|CP004085.1| 2182521 2182234 -3 - 288 hypothetical protein - none -
fig|6666666.67506.peg.1868 CDS gi|448276180|gb|CP004085.1| 2183639 2182959 -2 - 681 FIG00544659: hypothetical protein - none -
fig|6666666.67506.peg.1869 CDS gi|448276180|gb|CP004085.1| 2184970 2183672 -1 - 1299 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67506.peg.1870 CDS gi|448276180|gb|CP004085.1| 2185010 2185150 2 + 141 hypothetical protein - none -
fig|6666666.67506.peg.1871 CDS gi|448276180|gb|CP004085.1| 2186450 2185101 -2 - 1350 Mobile element protein - none -
fig|6666666.67506.peg.1872 CDS gi|448276180|gb|CP004085.1| 2186699 2187883 2 + 1185 Mobile element protein - none -
fig|6666666.67506.peg.1873 CDS gi|448276180|gb|CP004085.1| 2188107 2189285 3 + 1179 Mobile element protein - none -
fig|6666666.67506.peg.1874 CDS gi|448276180|gb|CP004085.1| 2189476 2190654 1 + 1179 Mobile element protein - none -
fig|6666666.67506.peg.1875 CDS gi|448276180|gb|CP004085.1| 2192098 2191940 -1 - 159 hypothetical protein - none -
fig|6666666.67506.peg.1876 CDS gi|448276180|gb|CP004085.1| 2192616 2193794 3 + 1179 Mobile element protein - none -
fig|6666666.67506.peg.1877 CDS gi|448276180|gb|CP004085.1| 2194852 2194346 -1 - 507 hypothetical protein - none -
fig|6666666.67506.peg.1878 CDS gi|448276180|gb|CP004085.1| 2195024 2195905 2 + 882 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Butyrate metabolism cluster;
Fatty acid metabolism cluster;
Polyhydroxybutyrate metabolism
fig|6666666.67506.peg.1879 CDS gi|448276180|gb|CP004085.1| 2197023 2195902 -3 - 1122 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.1880 CDS gi|448276180|gb|CP004085.1| 2198500 2197016 -1 - 1485 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.1881 CDS gi|448276180|gb|CP004085.1| 2201075 2198670 -2 - 2406 putative membrane protein - none -
fig|6666666.67506.peg.1882 CDS gi|448276180|gb|CP004085.1| 2202643 2202215 -1 - 429 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.67506.peg.1883 CDS gi|448276180|gb|CP004085.1| 2203310 2202726 -2 - 585 FIG00544249: hypothetical protein - none -
fig|6666666.67506.peg.1884 CDS gi|448276180|gb|CP004085.1| 2203388 2204437 2 + 1050 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67506.peg.1885 CDS gi|448276180|gb|CP004085.1| 2204714 2204574 -2 - 141 hypothetical protein - none -
fig|6666666.67506.peg.1886 CDS gi|448276180|gb|CP004085.1| 2204742 2205719 3 + 978 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67506.peg.1887 CDS gi|448276180|gb|CP004085.1| 2206311 2207420 3 + 1110 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67506.peg.1888 CDS gi|448276180|gb|CP004085.1| 2209174 2207501 -1 - 1674 di- and tricarboxylate transporter - none -
fig|6666666.67506.peg.1889 CDS gi|448276180|gb|CP004085.1| 2209815 2209186 -3 - 630 hypothetical protein - none -
fig|6666666.67506.peg.1890 CDS gi|448276180|gb|CP004085.1| 2209927 2210343 1 + 417 hypothetical protein - none -
fig|6666666.67506.peg.1891 CDS gi|448276180|gb|CP004085.1| 2210422 2210820 1 + 399 hypothetical protein - none -
fig|6666666.67506.peg.1892 CDS gi|448276180|gb|CP004085.1| 2210969 2213671 2 + 2703 Phage infection protein - none -
fig|6666666.67506.peg.1893 CDS gi|448276180|gb|CP004085.1| 2213671 2215911 1 + 2241 hypothetical protein - none -
fig|6666666.67506.peg.1894 CDS gi|448276180|gb|CP004085.1| 2216324 2217337 2 + 1014 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67506.peg.1895 CDS gi|448276180|gb|CP004085.1| 2218879 2217488 -1 - 1392 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67506.peg.1896 CDS gi|448276180|gb|CP004085.1| 2219190 2220056 3 + 867 O-antigen export system permease protein RfbD - none -
fig|6666666.67506.peg.1897 CDS gi|448276180|gb|CP004085.1| 2220100 2220894 1 + 795 O-antigen export system, ATP-binding protein - none -
fig|6666666.67506.peg.1898 CDS gi|448276180|gb|CP004085.1| 2222224 2221994 -1 - 231 hypothetical protein - none -
fig|6666666.67506.peg.1899 CDS gi|448276180|gb|CP004085.1| 2222339 2223643 2 + 1305 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67506.peg.1900 CDS gi|448276180|gb|CP004085.1| 2224283 2223669 -2 - 615 FIG00544442: hypothetical protein - none -
fig|6666666.67506.peg.1901 CDS gi|448276180|gb|CP004085.1| 2224936 2224280 -1 - 657 FIG00544022: hypothetical protein - none -
fig|6666666.67506.peg.1902 CDS gi|448276180|gb|CP004085.1| 2225836 2225177 -1 - 660 FIG00549122: hypothetical protein - none -
fig|6666666.67506.peg.1903 CDS gi|448276180|gb|CP004085.1| 2226671 2225982 -2 - 690 hypothetical protein - none -
fig|6666666.67506.peg.1904 CDS gi|448276180|gb|CP004085.1| 2226766 2227071 1 + 306 FIG00543901: hypothetical protein - none -
fig|6666666.67506.peg.1905 CDS gi|448276180|gb|CP004085.1| 2227219 2227593 1 + 375 putative membrane protein - none -
fig|6666666.67506.peg.1906 CDS gi|448276180|gb|CP004085.1| 2227748 2229163 2 + 1416 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67506.peg.1907 CDS gi|448276180|gb|CP004085.1| 2229195 2229953 3 + 759 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67506.peg.1908 CDS gi|448276180|gb|CP004085.1| 2231042 2230143 -2 - 900 hypothetical protein - none -
fig|6666666.67506.peg.1909 CDS gi|448276180|gb|CP004085.1| 2232160 2231285 -1 - 876 hypothetical protein - none -
fig|6666666.67506.peg.1910 CDS gi|448276180|gb|CP004085.1| 2232497 2232378 -2 - 120 hypothetical protein - none -
fig|6666666.67506.peg.1911 CDS gi|448276180|gb|CP004085.1| 2232597 2232460 -3 - 138 hypothetical protein - none -
fig|6666666.67506.peg.1912 CDS gi|448276180|gb|CP004085.1| 2233437 2233604 3 + 168 hypothetical protein - none -
fig|6666666.67506.peg.1913 CDS gi|448276180|gb|CP004085.1| 2235381 2233783 -3 - 1599 Mobile element protein - none -
fig|6666666.67506.peg.1914 CDS gi|448276180|gb|CP004085.1| 2235443 2235856 2 + 414 hypothetical protein - none -
fig|6666666.67506.peg.1915 CDS gi|448276180|gb|CP004085.1| 2238006 2237884 -3 - 123 hypothetical protein - none -
fig|6666666.67506.peg.1916 CDS gi|448276180|gb|CP004085.1| 2241326 2240388 -2 - 939 CRISPR-associated protein Cas1 CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67506.peg.1917 CDS gi|448276180|gb|CP004085.1| 2241901 2241329 -1 - 573 CRISPR-associated protein, Cse3 family CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67506.peg.1918 CDS gi|448276180|gb|CP004085.1| 2242716 2242030 -3 - 687 CRISPR-associated protein, Cas5e family CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67506.peg.1919 CDS gi|448276180|gb|CP004085.1| 2243882 2242752 -2 - 1131 CRISPR-associated protein, Cse4 family CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67506.peg.1920 CDS gi|448276180|gb|CP004085.1| 2244146 2243931 -2 - 216 hypothetical protein - none -
fig|6666666.67506.peg.1921 CDS gi|448276180|gb|CP004085.1| 2244231 2244521 3 + 291 hypothetical protein - none -
fig|6666666.67506.peg.1922 CDS gi|448276180|gb|CP004085.1| 2246292 2244610 -3 - 1683 CRISPR-associated protein, Cse1 family CRISPRs
fig|6666666.67506.peg.1923 CDS gi|448276180|gb|CP004085.1| 2249108 2246454 -2 - 2655 CRISPR-associated helicase Cas3, protein CBSS-216592.1.peg.3534;
CRISPRs
fig|6666666.67506.peg.1924 CDS gi|448276180|gb|CP004085.1| 2249866 2251323 1 + 1458 sodium/glutamate symporter - none -
fig|6666666.67506.peg.1925 CDS gi|448276180|gb|CP004085.1| 2253054 2251600 -3 - 1455 FIG00546870: hypothetical protein - none -
fig|6666666.67506.peg.1926 CDS gi|448276180|gb|CP004085.1| 2253885 2253139 -3 - 747 FIG00546585: hypothetical protein - none -
fig|6666666.67506.peg.1927 CDS gi|448276180|gb|CP004085.1| 2254464 2254009 -3 - 456 Thioredoxin (EC 1.8.1.8) - none -
fig|6666666.67506.peg.1928 CDS gi|448276180|gb|CP004085.1| 2254540 2255061 1 + 522 FIG00548581: hypothetical protein - none -
fig|6666666.67506.peg.1929 CDS gi|448276180|gb|CP004085.1| 2255977 2255162 -1 - 816 ABC-type transporter, ATPase component - none -
fig|6666666.67506.peg.1930 CDS gi|448276180|gb|CP004085.1| 2256629 2256138 -2 - 492 CrcB protein - none -
fig|6666666.67506.peg.1931 CDS gi|448276180|gb|CP004085.1| 2257090 2256626 -1 - 465 CrcB protein - none -
fig|6666666.67506.peg.1932 CDS gi|448276180|gb|CP004085.1| 2257792 2257244 -1 - 549 Protein yceI precursor - none -
fig|6666666.67506.peg.1933 CDS gi|448276180|gb|CP004085.1| 2257941 2258582 3 + 642 Transcriptional regulator, MarR family - none -
fig|6666666.67506.peg.1934 CDS gi|448276180|gb|CP004085.1| 2260124 2258604 -2 - 1521 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67506.peg.1935 CDS gi|448276180|gb|CP004085.1| 2261395 2260937 -1 - 459 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67506.peg.1936 CDS gi|448276180|gb|CP004085.1| 2262108 2261491 -3 - 618 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67506.peg.1937 CDS gi|448276180|gb|CP004085.1| 2262479 2262192 -2 - 288 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.67506.peg.1938 CDS gi|448276180|gb|CP004085.1| 2262843 2262655 -3 - 189 FIG00544411: hypothetical protein - none -
fig|6666666.67506.peg.1939 CDS gi|448276180|gb|CP004085.1| 2264358 2262862 -3 - 1497 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1940 CDS gi|448276180|gb|CP004085.1| 2266578 2264359 -3 - 2220 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67506.peg.1941 CDS gi|448276180|gb|CP004085.1| 2266864 2267991 1 + 1128 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67506.peg.1942 CDS gi|448276180|gb|CP004085.1| 2268152 2268616 2 + 465 Transcriptional regulator, MarR family - none -
fig|6666666.67506.peg.1943 CDS gi|448276180|gb|CP004085.1| 2268653 2269879 2 + 1227 Universal stress protein family - none -
fig|6666666.67506.peg.1944 CDS gi|448276180|gb|CP004085.1| 2270081 2270557 2 + 477 hypothetical membrane protein - none -
fig|6666666.67506.peg.1945 CDS gi|448276180|gb|CP004085.1| 2273711 2270676 -2 - 3036 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67506.peg.1946 CDS gi|448276180|gb|CP004085.1| 2273752 2274378 1 + 627 FIG00546066: hypothetical protein - none -
fig|6666666.67506.peg.1947 CDS gi|448276180|gb|CP004085.1| 2276151 2274970 -3 - 1182 putative ABC transport system, permease protein - none -
fig|6666666.67506.peg.1948 CDS gi|448276180|gb|CP004085.1| 2276879 2276151 -2 - 729 ABC transporter, ATP-binding protein - none -
fig|6666666.67506.peg.1949 CDS gi|448276180|gb|CP004085.1| 2277492 2278532 3 + 1041 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67506.peg.1950 CDS gi|448276180|gb|CP004085.1| 2278674 2278561 -3 - 114 hypothetical protein - none -
fig|6666666.67506.peg.1951 CDS gi|448276180|gb|CP004085.1| 2279407 2279291 -1 - 117 hypothetical protein - none -
fig|6666666.67506.peg.1952 CDS gi|448276180|gb|CP004085.1| 2279517 2280596 3 + 1080 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67506.peg.1953 CDS gi|448276180|gb|CP004085.1| 2280799 2282340 1 + 1542 FIG00545175: hypothetical protein - none -
fig|6666666.67506.peg.1954 CDS gi|448276180|gb|CP004085.1| 2284554 2283022 -3 - 1533 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67506.peg.1955 CDS gi|448276180|gb|CP004085.1| 2285141 2284587 -2 - 555 hypothetical protein - none -
fig|6666666.67506.peg.1956 CDS gi|448276180|gb|CP004085.1| 2286701 2285160 -2 - 1542 hypothetical protein - none -
fig|6666666.67506.peg.1957 CDS gi|448276180|gb|CP004085.1| 2286827 2287855 2 + 1029 Sodium - Bile acid symporter - none -
fig|6666666.67506.peg.1958 CDS gi|448276180|gb|CP004085.1| 2288522 2287950 -2 - 573 hypothetical protein - none -
fig|6666666.67506.peg.1959 CDS gi|448276180|gb|CP004085.1| 2289632 2288784 -2 - 849 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67506.peg.1960 CDS gi|448276180|gb|CP004085.1| 2291017 2289749 -1 - 1269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67506.peg.1961 CDS gi|448276180|gb|CP004085.1| 2294369 2290992 -2 - 3378 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67506.peg.1962 CDS gi|448276180|gb|CP004085.1| 2296254 2294671 -3 - 1584 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67506.peg.1963 CDS gi|448276180|gb|CP004085.1| 2296367 2296251 -2 - 117 hypothetical protein - none -
fig|6666666.67506.peg.1964 CDS gi|448276180|gb|CP004085.1| 2296386 2297207 3 + 822 MutT/nudix family protein - none -
fig|6666666.67506.peg.1965 CDS gi|448276180|gb|CP004085.1| 2297217 2300096 3 + 2880 probable secreted protein. - none -
fig|6666666.67506.peg.1966 CDS gi|448276180|gb|CP004085.1| 2300184 2304722 3 + 4539 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67506.peg.1967 CDS gi|448276180|gb|CP004085.1| 2304928 2305590 1 + 663 putative RNA polymerase sigma factor - none -
fig|6666666.67506.peg.1968 CDS gi|448276180|gb|CP004085.1| 2305676 2306740 2 + 1065 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.67506.peg.1969 CDS gi|448276180|gb|CP004085.1| 2306869 2307192 1 + 324 Thioredoxin - none -
fig|6666666.67506.peg.1970 CDS gi|448276180|gb|CP004085.1| 2307249 2308475 3 + 1227 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.67506.peg.1971 CDS gi|448276180|gb|CP004085.1| 2309493 2308669 -3 - 825 FIG007808: hypothetical protein - none -
fig|6666666.67506.peg.1972 CDS gi|448276180|gb|CP004085.1| 2311155 2309719 -3 - 1437 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67506.peg.1973 CDS gi|448276180|gb|CP004085.1| 2312178 2311246 -3 - 933 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67506.peg.1974 CDS gi|448276180|gb|CP004085.1| 2313050 2312256 -2 - 795 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67506.peg.1975 CDS gi|448276180|gb|CP004085.1| 2314331 2313357 -2 - 975 Inner membrane protein translocase component YidC, long form - none -
fig|6666666.67506.peg.1976 CDS gi|448276180|gb|CP004085.1| 2315154 2314771 -3 - 384 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.67506.peg.1977 CDS gi|448276180|gb|CP004085.1| 2315449 2315312 -1 - 138 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67506.rna.1 RNA gi|448276180|gb|CP004085.1| 16638 16711 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.67506.rna.2 RNA gi|448276180|gb|CP004085.1| 16740 16812 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67506.rna.3 RNA gi|448276180|gb|CP004085.1| 68938 69022 1 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.67506.rna.4 RNA gi|448276180|gb|CP004085.1| 138964 140468 1 + 1505 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67506.rna.5 RNA gi|448276180|gb|CP004085.1| 140840 143941 2 + 3102 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67506.rna.6 RNA gi|448276180|gb|CP004085.1| 144064 144184 1 + 121 5S RNA - none -
fig|6666666.67506.rna.7 RNA gi|448276180|gb|CP004085.1| 334385 334467 2 + 83 tRNA-Tyr-GTA - none -
fig|6666666.67506.rna.8 RNA gi|448276180|gb|CP004085.1| 340248 340320 3 + 73 tRNA-Thr-GGT - none -
fig|6666666.67506.rna.9 RNA gi|448276180|gb|CP004085.1| 340388 340461 2 + 74 tRNA-Met-CAT - none -
fig|6666666.67506.rna.10 RNA gi|448276180|gb|CP004085.1| 340747 340819 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.67506.rna.11 RNA gi|448276180|gb|CP004085.1| 342871 342944 1 + 74 tRNA-Met-CAT - none -
fig|6666666.67506.rna.12 RNA gi|448276180|gb|CP004085.1| 343230 343302 3 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.67506.rna.13 RNA gi|448276180|gb|CP004085.1| 612279 612352 3 + 74 tRNA-Met-CAT - none -
fig|6666666.67506.rna.14 RNA gi|448276180|gb|CP004085.1| 675932 675861 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.67506.rna.15 RNA gi|448276180|gb|CP004085.1| 687613 687686 1 + 74 tRNA-Leu-TAA - none -
fig|6666666.67506.rna.16 RNA gi|448276180|gb|CP004085.1| 818903 818831 -2 - 73 tRNA-Arg-CCG tRNAs
fig|6666666.67506.rna.17 RNA gi|448276180|gb|CP004085.1| 909434 909505 2 + 72 tRNA-Gln-CTG - none -
fig|6666666.67506.rna.18 RNA gi|448276180|gb|CP004085.1| 909545 909617 2 + 73 tRNA-Glu-CTC - none -
fig|6666666.67506.rna.19 RNA gi|448276180|gb|CP004085.1| 911115 911187 3 + 73 tRNA-Glu-CTC - none -
fig|6666666.67506.rna.20 RNA gi|448276180|gb|CP004085.1| 1082624 1082552 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67506.rna.21 RNA gi|448276180|gb|CP004085.1| 1082728 1082658 -1 - 71 tRNA-Val-GAC tRNAs
fig|6666666.67506.rna.22 RNA gi|448276180|gb|CP004085.1| 1082834 1082763 -2 - 72 tRNA-Cys-GCA tRNAs
fig|6666666.67506.rna.23 RNA gi|448276180|gb|CP004085.1| 1083025 1082954 -1 - 72 tRNA-Cys-GCA tRNAs
fig|6666666.67506.rna.24 RNA gi|448276180|gb|CP004085.1| 1083154 1083082 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67506.rna.25 RNA gi|448276180|gb|CP004085.1| 1083257 1083186 -2 - 72 tRNA-Val-GAC tRNAs
fig|6666666.67506.rna.26 RNA gi|448276180|gb|CP004085.1| 1083351 1083279 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.67506.rna.27 RNA gi|448276180|gb|CP004085.1| 1083668 1083739 2 + 72 tRNA-Val-CAC tRNAs
fig|6666666.67506.rna.28 RNA gi|448276180|gb|CP004085.1| 1199781 1199696 -3 - 86 tRNA-Leu-GAG tRNAs
fig|6666666.67506.rna.29 RNA gi|448276180|gb|CP004085.1| 1253551 1253624 1 + 74 tRNA-Pro-GGG tRNAs
fig|6666666.67506.rna.30 RNA gi|448276180|gb|CP004085.1| 1284408 1284290 -3 - 119 5S RNA - none -
fig|6666666.67506.rna.31 RNA gi|448276180|gb|CP004085.1| 1287786 1284684 -3 - 3103 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67506.rna.32 RNA gi|448276180|gb|CP004085.1| 1289665 1288158 -1 - 1508 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67506.rna.33 RNA gi|448276180|gb|CP004085.1| 1340579 1340652 2 + 74 tRNA-Leu-CAA tRNAs
fig|6666666.67506.rna.34 RNA gi|448276180|gb|CP004085.1| 1525578 1525506 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.67506.rna.35 RNA gi|448276180|gb|CP004085.1| 1536098 1536027 -2 - 72 tRNA-Asn-GTT - none -
fig|6666666.67506.rna.36 RNA gi|448276180|gb|CP004085.1| 1537695 1537624 -3 - 72 tRNA-Asn-GTT - none -
fig|6666666.67506.rna.37 RNA gi|448276180|gb|CP004085.1| 1537814 1537887 2 + 74 tRNA-Met-CAT - none -
fig|6666666.67506.rna.38 RNA gi|448276180|gb|CP004085.1| 1619350 1619277 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.67506.rna.39 RNA gi|448276180|gb|CP004085.1| 1619543 1619472 -2 - 72 tRNA-Gly-TCC - none -
fig|6666666.67506.rna.40 RNA gi|448276180|gb|CP004085.1| 1631495 1631568 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.67506.rna.41 RNA gi|448276180|gb|CP004085.1| 1646627 1646699 2 + 73 tRNA-His-GTG - none -
fig|6666666.67506.rna.42 RNA gi|448276180|gb|CP004085.1| 1650620 1650693 2 + 74 tRNA-Lys-CTT - none -
fig|6666666.67506.rna.43 RNA gi|448276180|gb|CP004085.1| 1661505 1661586 3 + 82 tRNA-Leu-TAG - none -
fig|6666666.67506.rna.44 RNA gi|448276180|gb|CP004085.1| 1710351 1710279 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.67506.rna.45 RNA gi|448276180|gb|CP004085.1| 1749529 1749601 1 + 73 tRNA-Arg-CCT - none -
fig|6666666.67506.rna.46 RNA gi|448276180|gb|CP004085.1| 1816074 1815954 -3 - 121 5S RNA - none -
fig|6666666.67506.rna.47 RNA gi|448276180|gb|CP004085.1| 1819298 1816197 -2 - 3102 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67506.rna.48 RNA gi|448276180|gb|CP004085.1| 1821173 1819670 -2 - 1504 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67506.rna.49 RNA gi|448276180|gb|CP004085.1| 1834199 1834127 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.67506.rna.50 RNA gi|448276180|gb|CP004085.1| 1834294 1834221 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.67506.rna.51 RNA gi|448276180|gb|CP004085.1| 1835908 1835835 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.67506.rna.52 RNA gi|448276180|gb|CP004085.1| 1835982 1835910 -3 - 73 tRNA-Glu-TTC - none -
fig|6666666.67506.rna.53 RNA gi|448276180|gb|CP004085.1| 1837917 1837845 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.67506.rna.54 RNA gi|448276180|gb|CP004085.1| 1889543 1889471 -2 - 73 tRNA-Thr-TGT - none -
fig|6666666.67506.rna.55 RNA gi|448276180|gb|CP004085.1| 2087715 2087785 3 + 71 tRNA-Gly-CCC tRNAs
fig|6666666.67506.rna.56 RNA gi|448276180|gb|CP004085.1| 2103518 2103446 -2 - 73 tRNA-Thr-CGT - none -
fig|6666666.67506.rna.57 RNA gi|448276180|gb|CP004085.1| 2133856 2133929 1 + 74 tRNA-Pro-CGG tRNAs
fig|6666666.67506.rna.58 RNA gi|448276180|gb|CP004085.1| 2194014 2193929 -3 - 86 tRNA-Ser-GGA tRNAs
fig|6666666.67506.rna.59 RNA gi|448276180|gb|CP004085.1| 2202090 2202006 -3 - 85 tRNA-Ser-CGA tRNAs
fig|6666666.67506.rna.60 RNA gi|448276180|gb|CP004085.1| 2204583 2204511 -3 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67506.rna.61 RNA gi|448276180|gb|CP004085.1| 2205932 2205860 -2 - 73 tRNA-Arg-ACG tRNAs
fig|6666666.67506.rna.62 RNA gi|448276180|gb|CP004085.1| 2206193 2206106 -2 - 88 tRNA-Ser-GCT - none -
fig|6666666.67506.rna.63 RNA gi|448276180|gb|CP004085.1| 2216004 2216088 3 + 85 tRNA-Ser-TGA - none -