fig|6666666.67508.peg.2 CDS gi|356606463|emb|CAFW01000105.1| 110 934 2 + 825 Mobile element protein - none -
fig|6666666.67508.peg.3 CDS gi|356606463|emb|CAFW01000105.1| 1320 1003 -3 - 318 Mobile element protein - none -
fig|6666666.67508.peg.4 CDS gi|356606463|emb|CAFW01000105.1| 2343 1444 -3 - 900 Transcriptional regulator - none -
fig|6666666.67508.peg.5 CDS gi|356606463|emb|CAFW01000105.1| 2459 3634 2 + 1176 Putative sarcosine oxidase (EC 1.5.3.1) - none -
fig|6666666.67508.peg.6 CDS gi|356606463|emb|CAFW01000105.1| 3637 4863 1 + 1227 N-formylglutamate deformylase (EC 3.5.1.68) [alternative form] - none -
fig|6666666.67508.peg.7 CDS gi|356606463|emb|CAFW01000105.1| 5140 4868 -1 - 273 FIG00545382: hypothetical protein - none -
fig|6666666.67508.peg.8 CDS gi|356606463|emb|CAFW01000105.1| 6120 5140 -3 - 981 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.67508.peg.9 CDS gi|356606463|emb|CAFW01000105.1| 6308 6493 2 + 186 hypothetical protein - none -
fig|6666666.67508.peg.10 CDS gi|356606463|emb|CAFW01000105.1| 6562 7917 1 + 1356 FIG016551: Putative peptidase - none -
fig|6666666.67508.peg.11 CDS gi|356606463|emb|CAFW01000105.1| 8072 8662 2 + 591 FIG00543933: hypothetical protein - none -
fig|6666666.67508.peg.12 CDS gi|356606463|emb|CAFW01000105.1| 8738 8857 2 + 120 hypothetical protein - none -
fig|6666666.67508.peg.13 CDS gi|356606463|emb|CAFW01000105.1| 9601 9020 -1 - 582 DNA topology modulation protein - none -
fig|6666666.67508.peg.14 CDS gi|356606463|emb|CAFW01000105.1| 9841 11517 1 + 1677 FIG01029406: hypothetical protein - none -
fig|6666666.67508.peg.15 CDS gi|356606463|emb|CAFW01000105.1| 11712 11503 -3 - 210 hypothetical protein - none -
fig|6666666.67508.peg.16 CDS gi|356606463|emb|CAFW01000105.1| 12604 11921 -1 - 684 two-component system response regulator - none -
fig|6666666.67508.peg.17 CDS gi|356606463|emb|CAFW01000105.1| 14101 12974 -1 - 1128 hypothetical protein - none -
fig|6666666.67508.peg.18 CDS gi|356606463|emb|CAFW01000105.1| 14277 14603 3 + 327 hypothetical protein - none -
fig|6666666.67508.peg.19 CDS gi|356606463|emb|CAFW01000105.1| 14773 15723 1 + 951 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.20 CDS gi|356606463|emb|CAFW01000105.1| 16934 17101 2 + 168 hypothetical protein - none -
fig|6666666.67508.peg.21 CDS gi|356606463|emb|CAFW01000105.1| 17229 17990 3 + 762 Substrate-specific component STY3230 of queuosine-regulated ECF transporter ECF class transporters;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.22 CDS gi|356606463|emb|CAFW01000105.1| 17990 18649 2 + 660 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter ECF class transporters
fig|6666666.67508.peg.23 CDS gi|356606463|emb|CAFW01000105.1| 18727 19758 1 + 1032 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter / ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter ECF class transporters;
ECF class transporters
fig|6666666.67508.peg.24 CDS gi|356606463|emb|CAFW01000105.1| 19864 20862 1 + 999 oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67508.peg.25 CDS gi|356606463|emb|CAFW01000105.1| 21247 22110 1 + 864 FIG00543872: hypothetical protein - none -
fig|6666666.67508.peg.26 CDS gi|356606463|emb|CAFW01000105.1| 22295 22756 2 + 462 FIG00818182: hypothetical protein - none -
fig|6666666.67508.peg.27 CDS gi|356606463|emb|CAFW01000105.1| 22759 24501 1 + 1743 Serine/threonine phosphatase PPP (EC 3.1.3.16) - none -
fig|6666666.67508.peg.28 CDS gi|356606463|emb|CAFW01000105.1| 24502 25842 1 + 1341 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67508.peg.29 CDS gi|356606463|emb|CAFW01000105.1| 25839 27254 3 + 1416 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.30 CDS gi|356606463|emb|CAFW01000105.1| 27254 28852 2 + 1599 Serine/threonine-protein kinase PknA (EC 2.7.11.1) - none -
fig|6666666.67508.peg.31 CDS gi|356606463|emb|CAFW01000105.1| 28845 30878 3 + 2034 Serine/threonine protein kinase PrkC, regulator of stationary phase - none -
fig|6666666.67508.peg.32 CDS gi|356606463|emb|CAFW01000105.1| 31001 31276 2 + 276 FIG018426: putative septation inhibitor protein - none -
fig|6666666.67508.peg.33 CDS gi|356606463|emb|CAFW01000105.1| 31612 31373 -1 - 240 hypothetical protein - none -
fig|6666666.67508.peg.34 CDS gi|356606463|emb|CAFW01000105.1| 32144 31617 -2 - 528 conserved protein - none -
fig|6666666.67508.peg.35 CDS gi|356606463|emb|CAFW01000105.1| 32487 32137 -3 - 351 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67508.peg.36 CDS gi|356606463|emb|CAFW01000105.1| 33826 33173 -1 - 654 FIG056164: rhomboid family serine protease Peptidyl-prolyl cis-trans isomerase containing cluster
fig|6666666.67508.peg.37 CDS gi|356606463|emb|CAFW01000105.1| 34570 34034 -1 - 537 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase containing cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.38 CDS gi|356606463|emb|CAFW01000105.1| 34674 35363 3 + 690 2-haloalkanoic acid dehalogenase (EC 3.8.1.2) - none -
fig|6666666.67508.peg.39 CDS gi|356606463|emb|CAFW01000105.1| 37666 35360 -1 - 2307 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.67508.peg.40 CDS gi|356606463|emb|CAFW01000105.1| 38651 37677 -2 - 975 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67508.peg.41 CDS gi|356606463|emb|CAFW01000105.1| 38961 39995 3 + 1035 FIG00548998: hypothetical protein - none -
fig|6666666.67508.peg.42 CDS gi|356606463|emb|CAFW01000105.1| 40385 40588 2 + 204 hypothetical protein - none -
fig|6666666.67508.peg.43 CDS gi|356606463|emb|CAFW01000105.1| 40807 40655 -1 - 153 hypothetical protein - none -
fig|6666666.67508.peg.44 CDS gi|356606463|emb|CAFW01000105.1| 40812 42269 3 + 1458 putative ABC transporter ATP-binding protein( EC:3.6.3.- ) - none -
fig|6666666.67508.peg.45 CDS gi|356606463|emb|CAFW01000105.1| 42266 44083 2 + 1818 ABC transporter TetB - none -
fig|6666666.67508.peg.46 CDS gi|356606463|emb|CAFW01000105.1| 44544 45038 3 + 495 Putative acetyltransferase - none -
fig|6666666.67508.peg.47 CDS gi|356606463|emb|CAFW01000105.1| 45958 45035 -1 - 924 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67508.peg.48 CDS gi|356606463|emb|CAFW01000105.1| 46703 46032 -2 - 672 Glycine betaine ABC transport system permease protein Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67508.peg.49 CDS gi|356606463|emb|CAFW01000105.1| 47359 46700 -1 - 660 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67508.peg.50 CDS gi|356606463|emb|CAFW01000105.1| 48168 47356 -3 - 813 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67508.peg.51 CDS gi|356606463|emb|CAFW01000105.1| 48308 48472 2 + 165 hypothetical protein - none -
fig|6666666.67508.peg.52 CDS gi|356606463|emb|CAFW01000105.1| 48482 48823 2 + 342 hypothetical protein - none -
fig|6666666.67508.peg.53 CDS gi|356606463|emb|CAFW01000105.1| 49107 50597 3 + 1491 2-oxoglutarate/malate translocator - none -
fig|6666666.67508.peg.54 CDS gi|356606463|emb|CAFW01000105.1| 50654 51337 2 + 684 hypothetical protein - none -
fig|6666666.67508.peg.55 CDS gi|356606463|emb|CAFW01000105.1| 51334 52230 1 + 897 CAAX amino terminal protease family protein - none -
fig|6666666.67508.peg.56 CDS gi|356606463|emb|CAFW01000105.1| 52438 53790 1 + 1353 hypothetical protein - none -
fig|6666666.67508.peg.57 CDS gi|356606463|emb|CAFW01000105.1| 54127 53999 -1 - 129 hypothetical protein - none -
fig|6666666.67508.peg.58 CDS gi|356606463|emb|CAFW01000105.1| 55569 54559 -3 - 1011 hypothetical protein - none -
fig|6666666.67508.peg.59 CDS gi|356606463|emb|CAFW01000105.1| 56613 55645 -3 - 969 hypothetical protein - none -
fig|6666666.67508.peg.60 CDS gi|356606463|emb|CAFW01000105.1| 57931 56897 -1 - 1035 Putative membrane protein YeiH - none -
fig|6666666.67508.peg.61 CDS gi|356606463|emb|CAFW01000105.1| 58105 58911 1 + 807 LysR family transcriptional regulator YeiE LysR-family proteins in Escherichia coli
fig|6666666.67508.peg.62 CDS gi|356606463|emb|CAFW01000105.1| 59233 58913 -1 - 321 hypothetical protein - none -
fig|6666666.67508.peg.63 CDS gi|356606463|emb|CAFW01000105.1| 59682 61367 3 + 1686 hypothetical protein - none -
fig|6666666.67508.peg.64 CDS gi|356606463|emb|CAFW01000105.1| 61569 61435 -3 - 135 hypothetical protein - none -
fig|6666666.67508.peg.65 CDS gi|356606463|emb|CAFW01000105.1| 61568 62677 2 + 1110 Ca2+/H+ antiporter - none -
fig|6666666.67508.peg.66 CDS gi|356606463|emb|CAFW01000105.1| 62935 63741 1 + 807 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.67508.peg.67 CDS gi|356606463|emb|CAFW01000105.1| 63738 64403 3 + 666 Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67508.peg.68 CDS gi|356606463|emb|CAFW01000105.1| 64400 65071 2 + 672 Thiaminase II (EC 3.5.99.2) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67508.peg.69 CDS gi|356606463|emb|CAFW01000105.1| 65819 65073 -2 - 747 Hydroxymethylpyrimidine ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.67508.peg.70 CDS gi|356606463|emb|CAFW01000105.1| 66591 65809 -3 - 783 Hydroxymethylpyrimidine ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.67508.peg.71 CDS gi|356606463|emb|CAFW01000105.1| 67637 66591 -2 - 1047 Hydroxymethylpyrimidine ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.67508.peg.72 CDS gi|356606463|emb|CAFW01000105.1| 68326 67673 -1 - 654 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67508.peg.73 CDS gi|356606463|emb|CAFW01000105.1| 69132 68323 -3 - 810 Hydroxyethylthiazole kinase (EC 2.7.1.50) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67508.peg.74 CDS gi|356606463|emb|CAFW01000105.1| 69602 69408 -2 - 195 FIG00547096: hypothetical protein - none -
fig|6666666.67508.peg.75 CDS gi|356606463|emb|CAFW01000105.1| 70233 70442 3 + 210 hypothetical protein - none -
fig|6666666.67508.peg.76 CDS gi|356606463|emb|CAFW01000105.1| 70491 71555 3 + 1065 Low-specificity L-threonine aldolase (EC 4.1.2.5) Glycine Biosynthesis;
Threonine degradation
fig|6666666.67508.peg.77 CDS gi|356606463|emb|CAFW01000105.1| 72174 71560 -3 - 615 Putative exported protein precursor - none -
fig|6666666.67508.peg.78 CDS gi|356606463|emb|CAFW01000105.1| 72484 74418 1 + 1935 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67508.peg.79 CDS gi|356606463|emb|CAFW01000105.1| 74476 75090 1 + 615 FIG00548649: hypothetical protein - none -
fig|6666666.67508.peg.80 CDS gi|356606463|emb|CAFW01000105.1| 76050 75100 -3 - 951 Oxidoreductase, aldo/keto reductase family - none -
fig|6666666.67508.peg.81 CDS gi|356606463|emb|CAFW01000105.1| 76303 76112 -1 - 192 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.82 CDS gi|356606463|emb|CAFW01000105.1| 76373 76693 2 + 321 amino acid permease-associated region - none -
fig|6666666.67508.peg.83 CDS gi|356606463|emb|CAFW01000105.1| 77367 77071 -3 - 297 Integrative genetic element Gsu5, resolvase - none -
fig|6666666.67508.peg.84 CDS gi|356606463|emb|CAFW01000105.1| 78925 77666 -1 - 1260 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.67508.peg.85 CDS gi|356606463|emb|CAFW01000105.1| 79705 79046 -1 - 660 Mobile element protein - none -
fig|6666666.67508.peg.86 CDS gi|356606463|emb|CAFW01000105.1| 79664 79840 2 + 177 hypothetical protein - none -
fig|6666666.67508.peg.87 CDS gi|356606463|emb|CAFW01000105.1| 80115 79981 -3 - 135 hypothetical protein - none -
fig|6666666.67508.peg.88 CDS gi|356606463|emb|CAFW01000105.1| 80190 80498 3 + 309 Mobile element protein - none -
fig|6666666.67508.peg.89 CDS gi|356606542|emb|CAFW01000104.1| 6160 509 -1 - 5652 hypothetical protein - none -
fig|6666666.67508.peg.90 CDS gi|356606542|emb|CAFW01000104.1| 7048 6212 -1 - 837 potential surface-anchored protein - none -
fig|6666666.67508.peg.91 CDS gi|356606542|emb|CAFW01000104.1| 7946 7038 -2 - 909 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67508.peg.92 CDS gi|356606542|emb|CAFW01000104.1| 9674 8025 -2 - 1650 Fimbrial subunit type 2 precursor - none -
fig|6666666.67508.peg.93 CDS gi|356606547|emb|CAFW01000103.1| 190 411 1 + 222 Mobile element protein - none -
fig|6666666.67508.peg.94 CDS gi|356606547|emb|CAFW01000103.1| 796 1197 1 + 402 FIG00545526: hypothetical protein - none -
fig|6666666.67508.peg.95 CDS gi|356606547|emb|CAFW01000103.1| 1498 1232 -1 - 267 FIG00545565: hypothetical protein - none -
fig|6666666.67508.peg.96 CDS gi|356606547|emb|CAFW01000103.1| 1522 2754 1 + 1233 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67508.peg.97 CDS gi|356606547|emb|CAFW01000103.1| 2783 3247 2 + 465 Molybdenum cofactor biosynthesis protein MoaB ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67508.peg.98 CDS gi|356606547|emb|CAFW01000103.1| 3237 3716 3 + 480 Molybdenum cofactor biosynthesis protein MoaE ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67508.peg.99 CDS gi|356606547|emb|CAFW01000103.1| 3713 4846 2 + 1134 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67508.peg.100 CDS gi|356606547|emb|CAFW01000103.1| 5132 6100 2 + 969 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67508.peg.101 CDS gi|356606547|emb|CAFW01000103.1| 7334 6126 -2 - 1209 selenocysteine lyase - none -
fig|6666666.67508.peg.102 CDS gi|356606547|emb|CAFW01000103.1| 7438 8331 1 + 894 O-antigen export system permease protein RfbD - none -
fig|6666666.67508.peg.103 CDS gi|356606547|emb|CAFW01000103.1| 8340 9137 3 + 798 O-antigen export system, ATP-binding protein - none -
fig|6666666.67508.peg.104 CDS gi|356606547|emb|CAFW01000103.1| 9263 9697 2 + 435 hypothetical protein - none -
fig|6666666.67508.peg.105 CDS gi|356606547|emb|CAFW01000103.1| 9882 10313 3 + 432 hypothetical protein - none -
fig|6666666.67508.peg.106 CDS gi|356606547|emb|CAFW01000103.1| 11462 10731 -2 - 732 hypothetical protein - none -
fig|6666666.67508.peg.107 CDS gi|356606547|emb|CAFW01000103.1| 12159 11503 -3 - 657 FIG00546760: hypothetical protein - none -
fig|6666666.67508.peg.108 CDS gi|356606547|emb|CAFW01000103.1| 12203 13144 2 + 942 Putative glycosyl transferase - none -
fig|6666666.67508.peg.109 CDS gi|356606547|emb|CAFW01000103.1| 13692 13234 -3 - 459 FIG00544442: hypothetical protein - none -
fig|6666666.67508.peg.110 CDS gi|356606547|emb|CAFW01000103.1| 14116 13706 -1 - 411 FIG00544442: hypothetical protein - none -
fig|6666666.67508.peg.111 CDS gi|356606547|emb|CAFW01000103.1| 15142 14123 -1 - 1020 FIG00545361: hypothetical protein - none -
fig|6666666.67508.peg.112 CDS gi|356606547|emb|CAFW01000103.1| 15628 15167 -1 - 462 FIG00544111: hypothetical protein - none -
fig|6666666.67508.peg.113 CDS gi|356606547|emb|CAFW01000103.1| 17250 17417 3 + 168 hypothetical protein - none -
fig|6666666.67508.peg.114 CDS gi|356606547|emb|CAFW01000103.1| 18077 19096 2 + 1020 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.115 CDS gi|356606547|emb|CAFW01000103.1| 19160 20614 2 + 1455 FIG00545175: hypothetical protein - none -
fig|6666666.67508.peg.116 CDS gi|356606547|emb|CAFW01000103.1| 20638 20916 1 + 279 FIG00543901: hypothetical protein - none -
fig|6666666.67508.peg.117 CDS gi|356606547|emb|CAFW01000103.1| 20984 21679 2 + 696 putative secreted protein - none -
fig|6666666.67508.peg.118 CDS gi|356606547|emb|CAFW01000103.1| 21787 23202 1 + 1416 Oxidoreductase, FAD-binding protein - none -
fig|6666666.67508.peg.119 CDS gi|356606547|emb|CAFW01000103.1| 23216 23974 2 + 759 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.67508.peg.120 CDS gi|356606547|emb|CAFW01000103.1| 24264 25898 3 + 1635 hypothetical protein - none -
fig|6666666.67508.peg.121 CDS gi|356606547|emb|CAFW01000103.1| 25961 26413 2 + 453 hypothetical protein - none -
fig|6666666.67508.peg.122 CDS gi|356606547|emb|CAFW01000103.1| 26847 27035 3 + 189 hypothetical protein - none -
fig|6666666.67508.peg.123 CDS gi|356606547|emb|CAFW01000103.1| 27172 29121 1 + 1950 putative membrane protein - none -
fig|6666666.67508.peg.124 CDS gi|356606547|emb|CAFW01000103.1| 29133 32525 3 + 3393 putative arabinosyltransferase - none -
fig|6666666.67508.peg.125 CDS gi|356606547|emb|CAFW01000103.1| 33216 32650 -3 - 567 FMN reductase, NADPH-dependent - none -
fig|6666666.67508.peg.126 CDS gi|356606547|emb|CAFW01000103.1| 34197 33247 -3 - 951 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67508.peg.127 CDS gi|356606547|emb|CAFW01000103.1| 34690 34247 -1 - 444 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67508.peg.128 CDS gi|356606547|emb|CAFW01000103.1| 35630 34932 -2 - 699 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67508.peg.129 CDS gi|356606547|emb|CAFW01000103.1| 36079 35717 -1 - 363 hypothetical protein - none -
fig|6666666.67508.peg.130 CDS gi|356606547|emb|CAFW01000103.1| 37050 36262 -3 - 789 Nitrate ABC transporter, ATP-binding protein Nitrate and nitrite ammonification
fig|6666666.67508.peg.131 CDS gi|356606547|emb|CAFW01000103.1| 37825 37043 -1 - 783 Nitrate ABC transporter, permease protein Nitrate and nitrite ammonification
fig|6666666.67508.peg.132 CDS gi|356606547|emb|CAFW01000103.1| 39018 37822 -3 - 1197 putative cyanate ABC transporter, substrate binding protein - none -
fig|6666666.67508.peg.133 CDS gi|356606547|emb|CAFW01000103.1| 40160 39240 -2 - 921 FIG00544069: hypothetical protein - none -
fig|6666666.67508.peg.134 CDS gi|356606547|emb|CAFW01000103.1| 42141 40198 -3 - 1944 putative endopeptidase - none -
fig|6666666.67508.peg.135 CDS gi|356606547|emb|CAFW01000103.1| 42325 43914 1 + 1590 Na+/H+ antiporter - none -
fig|6666666.67508.peg.136 CDS gi|356606547|emb|CAFW01000103.1| 44004 44597 3 + 594 hypothetical protein - none -
fig|6666666.67508.peg.137 CDS gi|356606547|emb|CAFW01000103.1| 46331 45489 -2 - 843 lactoylglutathione lyase-like protein - none -
fig|6666666.67508.peg.138 CDS gi|356606547|emb|CAFW01000103.1| 46627 46334 -1 - 294 FIG002958: hypothetical protein DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67508.peg.139 CDS gi|356606547|emb|CAFW01000103.1| 46964 46596 -2 - 369 FIG00545554: hypothetical protein - none -
fig|6666666.67508.peg.140 CDS gi|356606547|emb|CAFW01000103.1| 47350 47021 -1 - 330 FIG00547592: hypothetical protein - none -
fig|6666666.67508.peg.141 CDS gi|356606547|emb|CAFW01000103.1| 47979 47377 -3 - 603 Threonine efflux protein - none -
fig|6666666.67508.peg.142 CDS gi|356606547|emb|CAFW01000103.1| 48852 48133 -3 - 720 putative oxidoreductase - none -
fig|6666666.67508.peg.143 CDS gi|356606547|emb|CAFW01000103.1| 49237 50151 1 + 915 putative transcriptional regulator - none -
fig|6666666.67508.peg.144 CDS gi|356606547|emb|CAFW01000103.1| 50486 51640 2 + 1155 Sarcosine oxidase( EC:1.5.3.1 ) - none -
fig|6666666.67508.peg.145 CDS gi|356606547|emb|CAFW01000103.1| 51644 53119 2 + 1476 sodium-solute symporter, putative - none -
fig|6666666.67508.peg.146 CDS gi|356606547|emb|CAFW01000103.1| 54468 53416 -3 - 1053 Abortive infection bacteriophage resistance protein - none -
fig|6666666.67508.peg.147 CDS gi|356606547|emb|CAFW01000103.1| 55066 54863 -1 - 204 ADP-ribosylglycohydrolase family protein - none -
fig|6666666.67508.peg.148 CDS gi|356606547|emb|CAFW01000103.1| 55554 55312 -3 - 243 ADP-ribosylglycohydrolase family protein - none -
fig|6666666.67508.peg.149 CDS gi|356606547|emb|CAFW01000103.1| 56122 56679 1 + 558 FIG00546739: hypothetical protein - none -
fig|6666666.67508.peg.150 CDS gi|356606547|emb|CAFW01000103.1| 57415 56735 -1 - 681 Alkylated DNA repair protein AlkB DNA repair, bacterial
fig|6666666.67508.peg.151 CDS gi|356606547|emb|CAFW01000103.1| 57458 58129 2 + 672 Putative sugar acetyltransferase - none -
fig|6666666.67508.peg.152 CDS gi|356606547|emb|CAFW01000103.1| 58092 60467 3 + 2376 ATP-dependent helicase HrpB - none -
fig|6666666.67508.peg.153 CDS gi|356606547|emb|CAFW01000103.1| 61568 62782 2 + 1215 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67508.peg.154 CDS gi|356606547|emb|CAFW01000103.1| 63515 62745 -2 - 771 FIG00545045: hypothetical protein - none -
fig|6666666.67508.peg.155 CDS gi|356606547|emb|CAFW01000103.1| 63590 64666 2 + 1077 FIG00545643: hypothetical protein - none -
fig|6666666.67508.peg.156 CDS gi|356606547|emb|CAFW01000103.1| 64677 65114 3 + 438 4-oxalocrotonate tautomerase-like protein - none -
fig|6666666.67508.peg.157 CDS gi|356606547|emb|CAFW01000103.1| 65342 65118 -2 - 225 FIG00544558: hypothetical protein - none -
fig|6666666.67508.peg.158 CDS gi|356606547|emb|CAFW01000103.1| 66780 65335 -3 - 1446 FIG00544558: hypothetical protein - none -
fig|6666666.67508.peg.159 CDS gi|356606547|emb|CAFW01000103.1| 67409 66846 -2 - 564 Lysine decarboxylase family - none -
fig|6666666.67508.peg.160 CDS gi|356606547|emb|CAFW01000103.1| 67436 68170 2 + 735 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67508.peg.161 CDS gi|356606547|emb|CAFW01000103.1| 68323 69621 1 + 1299 FIG00544490: hypothetical protein - none -
fig|6666666.67508.peg.162 CDS gi|356606547|emb|CAFW01000103.1| 70171 69653 -1 - 519 FIG00545581: hypothetical protein - none -
fig|6666666.67508.peg.163 CDS gi|356606547|emb|CAFW01000103.1| 70546 70427 -1 - 120 hypothetical protein - none -
fig|6666666.67508.peg.164 CDS gi|356606547|emb|CAFW01000103.1| 71606 71040 -2 - 567 Ferritin-like protein - none -
fig|6666666.67508.peg.165 CDS gi|356606547|emb|CAFW01000103.1| 72606 71941 -3 - 666 Heme oxygenase (EC 1.14.99.3) Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.166 CDS gi|356606547|emb|CAFW01000103.1| 74207 72786 -2 - 1422 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.67508.peg.167 CDS gi|356606547|emb|CAFW01000103.1| 74304 74729 3 + 426 hypothetical protein - none -
fig|6666666.67508.peg.168 CDS gi|356606547|emb|CAFW01000103.1| 75292 74759 -1 - 534 putative membrane protein - none -
fig|6666666.67508.peg.169 CDS gi|356606547|emb|CAFW01000103.1| 75468 75821 3 + 354 hypothetical protein - none -
fig|6666666.67508.peg.170 CDS gi|356606547|emb|CAFW01000103.1| 75853 76788 1 + 936 hypothetical protein - none -
fig|6666666.67508.peg.171 CDS gi|356606547|emb|CAFW01000103.1| 77256 78509 3 + 1254 FIG00543870: hypothetical protein - none -
fig|6666666.67508.peg.172 CDS gi|356606547|emb|CAFW01000103.1| 79441 78506 -1 - 936 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.67508.peg.173 CDS gi|356606547|emb|CAFW01000103.1| 79746 79528 -3 - 219 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67508.peg.174 CDS gi|356606626|emb|CAFW01000102.1| 67 774 1 + 708 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67508.peg.175 CDS gi|356606626|emb|CAFW01000102.1| 811 2001 1 + 1191 CapZD protein - none -
fig|6666666.67508.peg.176 CDS gi|356606626|emb|CAFW01000102.1| 2853 2503 -3 - 351 Mobile element protein - none -
fig|6666666.67508.peg.177 CDS gi|356606628|emb|CAFW01000101.1| 142 354 1 + 213 Mobile element protein - none -
fig|6666666.67508.peg.178 CDS gi|356606628|emb|CAFW01000101.1| 1548 3767 3 + 2220 hypothetical protein - none -
fig|6666666.67508.peg.179 CDS gi|356606628|emb|CAFW01000101.1| 4444 5523 1 + 1080 hypothetical protein - none -
fig|6666666.67508.peg.180 CDS gi|356606628|emb|CAFW01000101.1| 5737 6678 1 + 942 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.67508.peg.181 CDS gi|356606634|emb|CAFW01000100.1| 66 371 3 + 306 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.67508.peg.182 CDS gi|356606634|emb|CAFW01000100.1| 440 1804 2 + 1365 Dyp-type peroxidase family protein - none -
fig|6666666.67508.peg.183 CDS gi|356606634|emb|CAFW01000100.1| 1877 3952 2 + 2076 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.67508.peg.184 CDS gi|356606634|emb|CAFW01000100.1| 4034 4645 2 + 612 FIG049476: HIT family protein - none -
fig|6666666.67508.peg.185 CDS gi|356606634|emb|CAFW01000100.1| 4638 5297 3 + 660 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.186 CDS gi|356606634|emb|CAFW01000100.1| 5306 6214 2 + 909 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase) - none -
fig|6666666.67508.peg.187 CDS gi|356606634|emb|CAFW01000100.1| 6263 7390 2 + 1128 Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57) - none -
fig|6666666.67508.peg.188 CDS gi|356606634|emb|CAFW01000100.1| 7393 7905 1 + 513 FIG053954: Probable conserved membrane protein - none -
fig|6666666.67508.peg.189 CDS gi|356606634|emb|CAFW01000100.1| 9343 7886 -1 - 1458 putative integral membrane protein - none -
fig|6666666.67508.peg.190 CDS gi|356606634|emb|CAFW01000100.1| 9908 9429 -2 - 480 FIG00546244: hypothetical protein - none -
fig|6666666.67508.peg.191 CDS gi|356606634|emb|CAFW01000100.1| 10154 10885 2 + 732 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.67508.peg.192 CDS gi|356606634|emb|CAFW01000100.1| 11023 11778 1 + 756 FIG000859: hypothetical protein - none -
fig|6666666.67508.peg.193 CDS gi|356606634|emb|CAFW01000100.1| 11968 12531 1 + 564 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.67508.peg.194 CDS gi|356606634|emb|CAFW01000100.1| 12671 13306 2 + 636 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.67508.peg.195 CDS gi|356606634|emb|CAFW01000100.1| 13330 14409 1 + 1080 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.67508.peg.196 CDS gi|356606634|emb|CAFW01000100.1| 14526 14969 3 + 444 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.67508.peg.197 CDS gi|356606634|emb|CAFW01000100.1| 15275 17275 2 + 2001 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.67508.peg.198 CDS gi|356606634|emb|CAFW01000100.1| 17278 18432 1 + 1155 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.67508.peg.199 CDS gi|356606634|emb|CAFW01000100.1| 18595 20301 1 + 1707 dipeptide-binding protein DciAE - none -
fig|6666666.67508.peg.200 CDS gi|356606634|emb|CAFW01000100.1| 20418 20966 3 + 549 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.67508.peg.201 CDS gi|356606634|emb|CAFW01000100.1| 21140 23383 2 + 2244 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.67508.peg.202 CDS gi|356606634|emb|CAFW01000100.1| 23652 25775 3 + 2124 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67508.peg.203 CDS gi|356606634|emb|CAFW01000100.1| 25878 26465 3 + 588 FIG00544222: hypothetical protein - none -
fig|6666666.67508.peg.204 CDS gi|356606634|emb|CAFW01000100.1| 26866 26558 -1 - 309 hypothetical protein - none -
fig|6666666.67508.peg.205 CDS gi|356606634|emb|CAFW01000100.1| 27402 27088 -3 - 315 FIG00543894: hypothetical protein - none -
fig|6666666.67508.peg.206 CDS gi|356606634|emb|CAFW01000100.1| 28520 27666 -2 - 855 Probable peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase B) (Rotamase B) - none -
fig|6666666.67508.peg.207 CDS gi|356606634|emb|CAFW01000100.1| 28765 29262 1 + 498 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.67508.peg.208 CDS gi|356606634|emb|CAFW01000100.1| 29395 30042 1 + 648 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.67508.peg.209 CDS gi|356606634|emb|CAFW01000100.1| 30048 31325 3 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.67508.peg.210 CDS gi|356606634|emb|CAFW01000100.1| 32854 31442 -1 - 1413 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.211 CDS gi|356606634|emb|CAFW01000100.1| 33705 33049 -3 - 657 FMN reductase (EC 1.5.1.29) Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67508.peg.212 CDS gi|356606634|emb|CAFW01000100.1| 34914 33799 -3 - 1116 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase - none -
fig|6666666.67508.peg.213 CDS gi|356606634|emb|CAFW01000100.1| 35815 35018 -1 - 798 Putative CBS domain containing protein - none -
fig|6666666.67508.peg.214 CDS gi|356606634|emb|CAFW01000100.1| 36865 35966 -1 - 900 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.67508.peg.215 CDS gi|356606634|emb|CAFW01000100.1| 37177 39000 1 + 1824 Aspartyl-tRNA synthetase (EC 6.1.1.12) @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Asp and Asn
fig|6666666.67508.peg.216 CDS gi|356606634|emb|CAFW01000100.1| 39127 40359 1 + 1233 FIG00544116: hypothetical protein - none -
fig|6666666.67508.peg.217 CDS gi|356606634|emb|CAFW01000100.1| 40417 41910 1 + 1494 ATPase, AAA family - none -
fig|6666666.67508.peg.218 CDS gi|356606634|emb|CAFW01000100.1| 42138 44813 3 + 2676 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.67508.peg.219 CDS gi|356606634|emb|CAFW01000100.1| 44840 45403 2 + 564 Putative Holliday junction resolvase (EC 3.1.-.-) - none -
fig|6666666.67508.peg.220 CDS gi|356606634|emb|CAFW01000100.1| 45598 46788 1 + 1191 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase
fig|6666666.67508.peg.221 CDS gi|356606634|emb|CAFW01000100.1| 46871 47731 2 + 861 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.222 CDS gi|356606634|emb|CAFW01000100.1| 47811 48263 3 + 453 signal peptidase - none -
fig|6666666.67508.peg.223 CDS gi|356606634|emb|CAFW01000100.1| 48293 49543 2 + 1251 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.224 CDS gi|356606634|emb|CAFW01000100.1| 49549 50094 1 + 546 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.225 CDS gi|356606634|emb|CAFW01000100.1| 50164 51273 1 + 1110 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.226 CDS gi|356606634|emb|CAFW01000100.1| 51296 51745 2 + 450 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.67508.peg.227 CDS gi|356606634|emb|CAFW01000100.1| 51853 52944 1 + 1092 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) Protein degradation
fig|6666666.67508.peg.228 CDS gi|356606634|emb|CAFW01000100.1| 53067 53630 3 + 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.67508.peg.229 CDS gi|356606634|emb|CAFW01000100.1| 53633 54331 2 + 699 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.67508.peg.230 CDS gi|356606634|emb|CAFW01000100.1| 54428 55282 2 + 855 UDP-galactose-lipid carrier transferase (EC 2.-.-.-) - none -
fig|6666666.67508.peg.231 CDS gi|356606634|emb|CAFW01000100.1| 55843 55352 -1 - 492 FIG00546283: hypothetical protein - none -
fig|6666666.67508.peg.232 CDS gi|356606634|emb|CAFW01000100.1| 56333 55836 -2 - 498 FIG00544983: hypothetical protein - none -
fig|6666666.67508.peg.233 CDS gi|356606634|emb|CAFW01000100.1| 57235 56372 -1 - 864 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67508.peg.234 CDS gi|356606634|emb|CAFW01000100.1| 57214 58656 1 + 1443 putative ABC transporter permease protein - none -
fig|6666666.67508.peg.235 CDS gi|356606634|emb|CAFW01000100.1| 58659 60407 3 + 1749 ABC-type transport system ATPase component - none -
fig|6666666.67508.peg.236 CDS gi|356606634|emb|CAFW01000100.1| 60461 61552 2 + 1092 putative polyhydroxybutyrate depolymerase - none -
fig|6666666.67508.peg.237 CDS gi|356606634|emb|CAFW01000100.1| 62758 61565 -1 - 1194 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.67508.peg.238 CDS gi|356606634|emb|CAFW01000100.1| 64080 62755 -3 - 1326 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.239 CDS gi|356606634|emb|CAFW01000100.1| 64475 64675 2 + 201 FIG00544672: hypothetical protein - none -
fig|6666666.67508.peg.240 CDS gi|356606634|emb|CAFW01000100.1| 65058 64777 -3 - 282 hypothetical protein - none -
fig|6666666.67508.peg.241 CDS gi|356606634|emb|CAFW01000100.1| 65853 65587 -3 - 267 hypothetical protein - none -
fig|6666666.67508.peg.242 CDS gi|356606634|emb|CAFW01000100.1| 66871 66437 -1 - 435 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.67508.peg.243 CDS gi|356606634|emb|CAFW01000100.1| 68027 66876 -2 - 1152 hydrolase of the alpha/beta superfamily - none -
fig|6666666.67508.peg.244 CDS gi|356606634|emb|CAFW01000100.1| 68157 70418 3 + 2262 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67508.peg.245 CDS gi|356606634|emb|CAFW01000100.1| 70521 70955 3 + 435 FIG00672531: hypothetical protein - none -
fig|6666666.67508.peg.246 CDS gi|356606634|emb|CAFW01000100.1| 71065 71874 1 + 810 FIG00545122: hypothetical protein - none -
fig|6666666.67508.peg.247 CDS gi|356606634|emb|CAFW01000100.1| 71974 72675 1 + 702 FIG00544095: hypothetical protein - none -
fig|6666666.67508.peg.248 CDS gi|356606634|emb|CAFW01000100.1| 72906 73523 3 + 618 FIG00544641: hypothetical protein - none -
fig|6666666.67508.peg.249 CDS gi|356606634|emb|CAFW01000100.1| 76923 73591 -3 - 3333 hypothetical protein - none -
fig|6666666.67508.peg.250 CDS gi|356606634|emb|CAFW01000100.1| 79082 77106 -2 - 1977 FIG00544299: hypothetical protein - none -
fig|6666666.67508.peg.251 CDS gi|356606634|emb|CAFW01000100.1| 79255 80940 1 + 1686 ABC-type dipeptide transport system, periplasmic component - none -
fig|6666666.67508.peg.252 CDS gi|356606634|emb|CAFW01000100.1| 80941 81879 1 + 939 putative transport protein - none -
fig|6666666.67508.peg.253 CDS gi|356606634|emb|CAFW01000100.1| 81880 82746 1 + 867 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67508.peg.254 CDS gi|356606634|emb|CAFW01000100.1| 82752 84383 3 + 1632 putative ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.255 CDS gi|356606634|emb|CAFW01000100.1| 84396 85625 3 + 1230 Alkylhydroperoxidase AhpD domain protein - none -
fig|6666666.67508.peg.256 CDS gi|356606634|emb|CAFW01000100.1| 87417 85750 -3 - 1668 hypothetical protein - none -
fig|6666666.67508.peg.257 CDS gi|356606634|emb|CAFW01000100.1| 88512 87658 -3 - 855 Putative secreted protein - none -
fig|6666666.67508.peg.258 CDS gi|356606634|emb|CAFW01000100.1| 89408 88548 -2 - 861 FIG00545058: hypothetical protein - none -
fig|6666666.67508.peg.259 CDS gi|356606634|emb|CAFW01000100.1| 90832 89411 -1 - 1422 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.67508.peg.260 CDS gi|356606634|emb|CAFW01000100.1| 92337 90868 -3 - 1470 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.67508.peg.261 CDS gi|356606634|emb|CAFW01000100.1| 92411 92878 2 + 468 FIG00544657: hypothetical protein - none -
fig|6666666.67508.peg.262 CDS gi|356606634|emb|CAFW01000100.1| 94113 92974 -3 - 1140 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.67508.peg.263 CDS gi|356606634|emb|CAFW01000100.1| 94145 94747 2 + 603 FIG00544791: hypothetical protein - none -
fig|6666666.67508.peg.264 CDS gi|356606634|emb|CAFW01000100.1| 96174 94819 -3 - 1356 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.67508.peg.265 CDS gi|356606634|emb|CAFW01000100.1| 96409 97701 1 + 1293 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - none -
fig|6666666.67508.peg.266 CDS gi|356606634|emb|CAFW01000100.1| 97941 98525 3 + 585 hypothetical protein - none -
fig|6666666.67508.peg.267 CDS gi|356606634|emb|CAFW01000100.1| 100391 99072 -2 - 1320 putative transport protein - none -
fig|6666666.67508.peg.268 CDS gi|356606634|emb|CAFW01000100.1| 100548 100664 3 + 117 hypothetical protein - none -
fig|6666666.67508.peg.269 CDS gi|356606634|emb|CAFW01000100.1| 101976 101266 -3 - 711 Putative secreted protein - none -
fig|6666666.67508.peg.270 CDS gi|356606634|emb|CAFW01000100.1| 102154 101984 -1 - 171 FIG00547418: hypothetical protein - none -
fig|6666666.67508.peg.271 CDS gi|356606634|emb|CAFW01000100.1| 102537 102923 3 + 387 FIG00820327: hypothetical protein Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67508.peg.272 CDS gi|356606634|emb|CAFW01000100.1| 104224 103016 -1 - 1209 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.67508.peg.273 CDS gi|356606634|emb|CAFW01000100.1| 105177 104260 -3 - 918 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67508.peg.274 CDS gi|356606634|emb|CAFW01000100.1| 106834 105239 -1 - 1596 Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67508.peg.275 CDS gi|356606634|emb|CAFW01000100.1| 107581 106895 -1 - 687 Cytoplasmic membrane protein FsxA Lipid-linked oligosaccharide synthesis related cluster
fig|6666666.67508.peg.276 CDS gi|356606634|emb|CAFW01000100.1| 107665 108468 1 + 804 Cobalamin biosynthesis protein CobG - none -
fig|6666666.67508.peg.277 CDS gi|356606634|emb|CAFW01000100.1| 109293 108502 -3 - 792 Oxidoreductase, short-chain dehydrogenase/reductase family - none -
fig|6666666.67508.peg.278 CDS gi|356606634|emb|CAFW01000100.1| 110413 109280 -1 - 1134 probable metallopeptidase - none -
fig|6666666.67508.peg.279 CDS gi|356606634|emb|CAFW01000100.1| 110462 111145 2 + 684 FIG00545318: hypothetical protein - none -
fig|6666666.67508.peg.280 CDS gi|356606634|emb|CAFW01000100.1| 114005 111156 -2 - 2850 FIG005666: putative helicase Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67508.peg.281 CDS gi|356606634|emb|CAFW01000100.1| 115295 114081 -2 - 1215 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67508.peg.282 CDS gi|356606634|emb|CAFW01000100.1| 115934 115401 -2 - 534 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.67508.peg.283 CDS gi|356606634|emb|CAFW01000100.1| 118028 115989 -2 - 2040 FIG019733: possible DNA-binding protein Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related
fig|6666666.67508.peg.284 CDS gi|356606634|emb|CAFW01000100.1| 119511 118069 -3 - 1443 Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67508.peg.285 CDS gi|356606634|emb|CAFW01000100.1| 119709 119518 -3 - 192 Prokaryotic ubiquitin-like protein Pup Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67508.peg.286 CDS gi|356606634|emb|CAFW01000100.1| 121301 119733 -2 - 1569 Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1 Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67508.peg.287 CDS gi|356606634|emb|CAFW01000100.1| 122887 121286 -1 - 1602 Bacterial proteasome-activating AAA-ATPase (PAN) Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Proteasome archaeal
fig|6666666.67508.peg.288 CDS gi|356606634|emb|CAFW01000100.1| 123870 123034 -3 - 837 RNA methyltransferase - none -
fig|6666666.67508.peg.289 CDS gi|356606634|emb|CAFW01000100.1| 125178 123919 -3 - 1260 aspartyl aminopeptidase - none -
fig|6666666.67508.peg.290 CDS gi|356606634|emb|CAFW01000100.1| 125326 125153 -1 - 174 hypothetical protein - none -
fig|6666666.67508.peg.291 CDS gi|356606634|emb|CAFW01000100.1| 125216 126139 2 + 924 RecB family exonuclease - none -
fig|6666666.67508.peg.292 CDS gi|356606634|emb|CAFW01000100.1| 127938 126274 -3 - 1665 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67508.peg.293 CDS gi|356606634|emb|CAFW01000100.1| 129685 128087 -1 - 1599 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67508.peg.294 CDS gi|356606634|emb|CAFW01000100.1| 130695 129850 -3 - 846 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67508.peg.295 CDS gi|356606634|emb|CAFW01000100.1| 131035 130772 -1 - 264 Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.67508.peg.296 CDS gi|356606634|emb|CAFW01000100.1| 131776 131087 -1 - 690 possible hydrolase - none -
fig|6666666.67508.peg.297 CDS gi|356606634|emb|CAFW01000100.1| 132280 131900 -1 - 381 FIG00543988: hypothetical protein - none -
fig|6666666.67508.peg.298 CDS gi|356606634|emb|CAFW01000100.1| 133572 132301 -3 - 1272 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC Glutathione analogs: mycothiol
fig|6666666.67508.peg.299 CDS gi|356606634|emb|CAFW01000100.1| 134478 133606 -3 - 873 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.67508.peg.300 CDS gi|356606634|emb|CAFW01000100.1| 134542 135585 1 + 1044 FIG00545923: hypothetical protein - none -
fig|6666666.67508.peg.301 CDS gi|356606634|emb|CAFW01000100.1| 135678 136820 3 + 1143 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.67508.peg.302 CDS gi|356606634|emb|CAFW01000100.1| 137328 136912 -3 - 417 FIG00543853: hypothetical protein - none -
fig|6666666.67508.peg.303 CDS gi|356606634|emb|CAFW01000100.1| 137910 137353 -3 - 558 Phospholipid-binding protein - none -
fig|6666666.67508.peg.304 CDS gi|356606634|emb|CAFW01000100.1| 138507 138370 -3 - 138 hypothetical protein - none -
fig|6666666.67508.peg.305 CDS gi|356606634|emb|CAFW01000100.1| 138509 139147 2 + 639 DedA family protein paralog DedA family of inner membrane proteins
fig|6666666.67508.peg.306 CDS gi|356606634|emb|CAFW01000100.1| 139153 139746 1 + 594 FIG00545282: hypothetical protein - none -
fig|6666666.67508.peg.307 CDS gi|356606634|emb|CAFW01000100.1| 140612 139752 -2 - 861 FIG00544636: hypothetical protein - none -
fig|6666666.67508.peg.308 CDS gi|356606634|emb|CAFW01000100.1| 140651 141460 2 + 810 FIG00546138: hypothetical protein - none -
fig|6666666.67508.peg.309 CDS gi|356606634|emb|CAFW01000100.1| 142562 141468 -2 - 1095 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.310 CDS gi|356606634|emb|CAFW01000100.1| 144509 142656 -2 - 1854 cell wall-associated hydrolase - none -
fig|6666666.67508.peg.311 CDS gi|356606634|emb|CAFW01000100.1| 145733 145275 -2 - 459 FIG00545300: hypothetical protein - none -
fig|6666666.67508.peg.312 CDS gi|356606634|emb|CAFW01000100.1| 146038 148854 1 + 2817 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Methylcitrate cycle;
Propionate-CoA to Succinate Module;
Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67508.peg.313 CDS gi|356606634|emb|CAFW01000100.1| 149029 149592 1 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.314 CDS gi|356606634|emb|CAFW01000100.1| 154202 149667 -2 - 4536 DNA helicase - none -
fig|6666666.67508.peg.315 CDS gi|356606634|emb|CAFW01000100.1| 155154 154480 -3 - 675 FIG00545571: hypothetical protein - none -
fig|6666666.67508.peg.316 CDS gi|356606634|emb|CAFW01000100.1| 155312 155581 2 + 270 ACT domain protein - none -
fig|6666666.67508.peg.317 CDS gi|356606634|emb|CAFW01000100.1| 155599 156957 1 + 1359 FIG00848225: hypothetical protein - none -
fig|6666666.67508.peg.318 CDS gi|356606634|emb|CAFW01000100.1| 157233 157868 3 + 636 putative transporter - none -
fig|6666666.67508.peg.319 CDS gi|356606634|emb|CAFW01000100.1| 158038 158385 1 + 348 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67508.peg.320 CDS gi|356606634|emb|CAFW01000100.1| 158447 159142 2 + 696 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.67508.peg.321 CDS gi|356606634|emb|CAFW01000100.1| 159129 159881 3 + 753 putative ABC transporter permease - none -
fig|6666666.67508.peg.322 CDS gi|356606634|emb|CAFW01000100.1| 159878 160834 2 + 957 putative permease binding-protein component - none -
fig|6666666.67508.peg.323 CDS gi|356606634|emb|CAFW01000100.1| 161081 161218 2 + 138 hypothetical protein - none -
fig|6666666.67508.peg.324 CDS gi|356606634|emb|CAFW01000100.1| 162918 161287 -3 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.325 CDS gi|356606634|emb|CAFW01000100.1| 163484 163068 -2 - 417 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.67508.peg.326 CDS gi|356606634|emb|CAFW01000100.1| 163934 163485 -2 - 450 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 Iron-sulfur cluster assembly
fig|6666666.67508.peg.327 CDS gi|356606634|emb|CAFW01000100.1| 165184 163934 -1 - 1251 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly
fig|6666666.67508.peg.328 CDS gi|356606634|emb|CAFW01000100.1| 165948 165193 -3 - 756 Iron-sulfur cluster assembly ATPase protein SufC CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67508.peg.329 CDS gi|356606634|emb|CAFW01000100.1| 167194 166010 -1 - 1185 Iron-sulfur cluster assembly protein SufD CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67508.peg.330 CDS gi|356606634|emb|CAFW01000100.1| 168645 167200 -3 - 1446 Iron-sulfur cluster assembly protein SufB CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67508.peg.331 CDS gi|356606634|emb|CAFW01000100.1| 169358 168642 -2 - 717 Iron-sulfur cluster regulator SufR CBSS-196164.1.peg.1690;
Iron-sulfur cluster assembly
fig|6666666.67508.peg.332 CDS gi|356606634|emb|CAFW01000100.1| 169600 171303 1 + 1704 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67508.peg.333 CDS gi|356606634|emb|CAFW01000100.1| 171411 171295 -3 - 117 hypothetical protein - none -
fig|6666666.67508.peg.334 CDS gi|356606634|emb|CAFW01000100.1| 171358 172242 1 + 885 ABC-type multidrug transport system, ATPase component CBSS-196164.1.peg.1690
fig|6666666.67508.peg.335 CDS gi|356606634|emb|CAFW01000100.1| 172248 173057 3 + 810 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67508.peg.336 CDS gi|356606634|emb|CAFW01000100.1| 173194 173054 -1 - 141 hypothetical protein - none -
fig|6666666.67508.peg.337 CDS gi|356606634|emb|CAFW01000100.1| 173127 174182 3 + 1056 Cytochrome oxidase assembly protein - none -
fig|6666666.67508.peg.338 CDS gi|356606634|emb|CAFW01000100.1| 174202 175170 1 + 969 Quinone oxidoreductase (EC 1.6.5.5) Quinone oxidoreductase family
fig|6666666.67508.peg.339 CDS gi|356606634|emb|CAFW01000100.1| 176251 175307 -1 - 945 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Biogenesis of cytochrome c oxidases;
CBSS-196164.1.peg.1690;
CBSS-316057.3.peg.563
fig|6666666.67508.peg.340 CDS gi|356606634|emb|CAFW01000100.1| 176270 176395 2 + 126 hypothetical protein - none -
fig|6666666.67508.peg.341 CDS gi|356606634|emb|CAFW01000100.1| 176684 178798 2 + 2115 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.67508.peg.342 CDS gi|356606634|emb|CAFW01000100.1| 178814 179899 2 + 1086 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.67508.peg.343 CDS gi|356606634|emb|CAFW01000100.1| 180079 181611 1 + 1533 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.67508.peg.344 CDS gi|356606634|emb|CAFW01000100.1| 181639 182550 1 + 912 OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial - none -
fig|6666666.67508.peg.345 CDS gi|356606634|emb|CAFW01000100.1| 182630 183397 2 + 768 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.67508.peg.346 CDS gi|356606634|emb|CAFW01000100.1| 183713 183480 -2 - 234 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.67508.peg.347 CDS gi|356606634|emb|CAFW01000100.1| 184729 183947 -1 - 783 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.67508.peg.348 CDS gi|356606634|emb|CAFW01000100.1| 185995 184778 -1 - 1218 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.67508.peg.349 CDS gi|356606634|emb|CAFW01000100.1| 187143 186136 -3 - 1008 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67508.peg.350 CDS gi|356606634|emb|CAFW01000100.1| 187240 187404 1 + 165 hypothetical protein - none -
fig|6666666.67508.peg.351 CDS gi|356606634|emb|CAFW01000100.1| 188505 187516 -3 - 990 Cytoplasmic hypothetical protein DUF199, a subgroup - none -
fig|6666666.67508.peg.352 CDS gi|356606634|emb|CAFW01000100.1| 189580 188573 -1 - 1008 Hypothetical protein UPF0052 - none -
fig|6666666.67508.peg.353 CDS gi|356606634|emb|CAFW01000100.1| 190661 189786 -2 - 876 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.67508.peg.354 CDS gi|356606634|emb|CAFW01000100.1| 192802 190751 -1 - 2052 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.67508.peg.355 CDS gi|356606634|emb|CAFW01000100.1| 193491 192895 -3 - 597 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67508.peg.356 CDS gi|356606634|emb|CAFW01000100.1| 193998 193507 -3 - 492 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster
fig|6666666.67508.peg.357 CDS gi|356606634|emb|CAFW01000100.1| 195302 194031 -2 - 1272 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67508.peg.358 CDS gi|356606634|emb|CAFW01000100.1| 195928 195314 -1 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.67508.peg.359 CDS gi|356606634|emb|CAFW01000100.1| 197022 195976 -3 - 1047 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.67508.peg.360 CDS gi|356606634|emb|CAFW01000100.1| 197732 197043 -2 - 690 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.67508.peg.361 CDS gi|356606634|emb|CAFW01000100.1| 199353 197734 -3 - 1620 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.67508.peg.362 CDS gi|356606634|emb|CAFW01000100.1| 200318 199350 -2 - 969 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Translation initiation factors bacterial
fig|6666666.67508.peg.363 CDS gi|356606634|emb|CAFW01000100.1| 200563 200333 -1 - 231 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67508.peg.364 CDS gi|356606808|emb|CAFW01000099.1| 457 1059 1 + 603 FIG00543909: hypothetical protein - none -
fig|6666666.67508.peg.365 CDS gi|356606810|emb|CAFW01000098.1| 57 551 3 + 495 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67508.peg.366 CDS gi|356606810|emb|CAFW01000098.1| 1377 1520 3 + 144 hypothetical protein - none -
fig|6666666.67508.peg.367 CDS gi|356606810|emb|CAFW01000098.1| 1561 1998 1 + 438 hypothetical protein - none -
fig|6666666.67508.peg.368 CDS gi|356606815|emb|CAFW01000097.1| 45 197 3 + 153 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67508.peg.369 CDS gi|356606815|emb|CAFW01000097.1| 194 904 2 + 711 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.67508.peg.370 CDS gi|356606815|emb|CAFW01000097.1| 913 1782 1 + 870 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.67508.peg.371 CDS gi|356606815|emb|CAFW01000097.1| 1784 2620 2 + 837 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.67508.peg.372 CDS gi|356606815|emb|CAFW01000097.1| 2712 3782 3 + 1071 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67508.peg.373 CDS gi|356606815|emb|CAFW01000097.1| 3830 5101 2 + 1272 Proline iminopeptidase (EC 3.4.11.5) Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67508.peg.374 CDS gi|356606815|emb|CAFW01000097.1| 5441 5187 -2 - 255 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67508.peg.375 CDS gi|356606815|emb|CAFW01000097.1| 6258 5479 -3 - 780 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67508.peg.376 CDS gi|356606815|emb|CAFW01000097.1| 7812 6637 -3 - 1176 FIG00543893: hypothetical protein - none -
fig|6666666.67508.peg.377 CDS gi|356606815|emb|CAFW01000097.1| 8061 8933 3 + 873 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.67508.peg.378 CDS gi|356606815|emb|CAFW01000097.1| 8937 9836 3 + 900 Auxin Efflux Carrier - none -
fig|6666666.67508.peg.379 CDS gi|356606815|emb|CAFW01000097.1| 9969 11219 3 + 1251 hypothetical protein - none -
fig|6666666.67508.peg.380 CDS gi|356606815|emb|CAFW01000097.1| 11551 11216 -1 - 336 FIG00544880: hypothetical protein - none -
fig|6666666.67508.peg.381 CDS gi|356606815|emb|CAFW01000097.1| 11594 11890 2 + 297 hypothetical protein - none -
fig|6666666.67508.peg.382 CDS gi|356606815|emb|CAFW01000097.1| 12198 11938 -3 - 261 FIG00545941: hypothetical protein - none -
fig|6666666.67508.peg.383 CDS gi|356606815|emb|CAFW01000097.1| 13259 12204 -2 - 1056 Cytochrome c-type biogenesis protein CcsA/ResC Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67508.peg.384 CDS gi|356606815|emb|CAFW01000097.1| 15026 13392 -2 - 1635 Ccs1/ResB-related putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67508.peg.385 CDS gi|356606815|emb|CAFW01000097.1| 15845 15054 -2 - 792 Cytochrome c-type biogenesis protein CcdA (DsbD analog) Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461;
Periplasmic disulfide interchange
fig|6666666.67508.peg.386 CDS gi|356606815|emb|CAFW01000097.1| 16463 15849 -2 - 615 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes;
CBSS-196164.1.peg.461
fig|6666666.67508.peg.387 CDS gi|356606815|emb|CAFW01000097.1| 17111 16503 -2 - 609 phosphoglycerate mutase/fructose-2,6-bisphosphatase - none -
fig|6666666.67508.peg.388 CDS gi|356606815|emb|CAFW01000097.1| 18450 17119 -3 - 1332 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.389 CDS gi|356606815|emb|CAFW01000097.1| 18595 19164 1 + 570 hypothetical protein - none -
fig|6666666.67508.peg.390 CDS gi|356606815|emb|CAFW01000097.1| 19509 19195 -3 - 315 Quaternary ammonium compound-resistance protein SugE - none -
fig|6666666.67508.peg.391 CDS gi|356606815|emb|CAFW01000097.1| 19550 20386 2 + 837 putative dehydrogenase - none -
fig|6666666.67508.peg.392 CDS gi|356606815|emb|CAFW01000097.1| 21933 20512 -3 - 1422 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.393 CDS gi|356606815|emb|CAFW01000097.1| 22992 21934 -3 - 1059 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.394 CDS gi|356606815|emb|CAFW01000097.1| 23534 23052 -2 - 483 TerC family integral membrane protein - none -
fig|6666666.67508.peg.395 CDS gi|356606815|emb|CAFW01000097.1| 24546 23605 -3 - 942 FIG00543961: hypothetical protein - none -
fig|6666666.67508.peg.396 CDS gi|356606815|emb|CAFW01000097.1| 25589 24597 -2 - 993 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.397 CDS gi|356606815|emb|CAFW01000097.1| 27415 25643 -1 - 1773 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis;
Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.398 CDS gi|356606815|emb|CAFW01000097.1| 28631 27711 -2 - 921 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.399 CDS gi|356606815|emb|CAFW01000097.1| 29920 28634 -1 - 1287 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.400 CDS gi|356606815|emb|CAFW01000097.1| 30497 30237 -2 - 261 Glutaredoxin-like domain protein - none -
fig|6666666.67508.peg.401 CDS gi|356606815|emb|CAFW01000097.1| 30613 31686 1 + 1074 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67508.peg.402 CDS gi|356606815|emb|CAFW01000097.1| 32342 32151 -2 - 192 Putative DNA-binding (excisionase) protein - none -
fig|6666666.67508.peg.403 CDS gi|356606815|emb|CAFW01000097.1| 33426 32608 -3 - 819 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.67508.peg.404 CDS gi|356606815|emb|CAFW01000097.1| 34640 33522 -2 - 1119 FIG01276758: hypothetical protein - none -
fig|6666666.67508.peg.405 CDS gi|356606815|emb|CAFW01000097.1| 35529 34645 -3 - 885 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67508.peg.406 CDS gi|356606815|emb|CAFW01000097.1| 35609 36541 2 + 933 FIG00543972: hypothetical protein - none -
fig|6666666.67508.peg.407 CDS gi|356606815|emb|CAFW01000097.1| 38363 37671 -2 - 693 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67508.peg.408 CDS gi|356606815|emb|CAFW01000097.1| 39613 38360 -1 - 1254 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3); Sensor-like histidine kinase senX3 (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67508.peg.409 CDS gi|356606815|emb|CAFW01000097.1| 40502 39744 -2 - 759 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.67508.peg.410 CDS gi|356606815|emb|CAFW01000097.1| 41821 40553 -1 - 1269 Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-) Glutathione analogs: mycothiol
fig|6666666.67508.peg.411 CDS gi|356606815|emb|CAFW01000097.1| 41882 42397 2 + 516 hypothetical protein - none -
fig|6666666.67508.peg.412 CDS gi|356606815|emb|CAFW01000097.1| 42607 44322 1 + 1716 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.413 CDS gi|356606815|emb|CAFW01000097.1| 44403 44525 3 + 123 hypothetical protein - none -
fig|6666666.67508.peg.414 CDS gi|356606815|emb|CAFW01000097.1| 44633 46345 2 + 1713 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.415 CDS gi|356606815|emb|CAFW01000097.1| 46498 48201 1 + 1704 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.416 CDS gi|356606815|emb|CAFW01000097.1| 49523 48291 -2 - 1233 hypothetical protein - none -
fig|6666666.67508.peg.417 CDS gi|356606815|emb|CAFW01000097.1| 50257 51228 1 + 972 hypothetical protein - none -
fig|6666666.67508.peg.418 CDS gi|356606815|emb|CAFW01000097.1| 52011 51595 -3 - 417 hypothetical protein - none -
fig|6666666.67508.peg.419 CDS gi|356606815|emb|CAFW01000097.1| 52347 52126 -3 - 222 hypothetical protein - none -
fig|6666666.67508.peg.420 CDS gi|356606815|emb|CAFW01000097.1| 53063 52569 -2 - 495 hypothetical protein - none -
fig|6666666.67508.peg.421 CDS gi|356606815|emb|CAFW01000097.1| 59782 56375 -1 - 3408 hypothetical protein - none -
fig|6666666.67508.peg.422 CDS gi|356606815|emb|CAFW01000097.1| 60523 59822 -1 - 702 hypothetical protein - none -
fig|6666666.67508.peg.423 CDS gi|356606815|emb|CAFW01000097.1| 62149 60788 -1 - 1362 hypothetical protein - none -
fig|6666666.67508.peg.424 CDS gi|356606868|emb|CAFW01000096.1| 12 431 3 + 420 Mobile element protein - none -
fig|6666666.67508.peg.425 CDS gi|356606868|emb|CAFW01000096.1| 1382 705 -2 - 678 Mn-dependent transcriptional regulator MntR - none -
fig|6666666.67508.peg.426 CDS gi|356606868|emb|CAFW01000096.1| 1482 2438 3 + 957 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67508.peg.427 CDS gi|356606872|emb|CAFW01000095.1| 28 573 1 + 546 COG1496: Uncharacterized conserved protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67508.peg.428 CDS gi|356606872|emb|CAFW01000095.1| 574 1302 1 + 729 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67508.peg.429 CDS gi|356606872|emb|CAFW01000095.1| 1344 1790 3 + 447 FIG021292: hypothetical protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67508.peg.430 CDS gi|356606872|emb|CAFW01000095.1| 1879 2172 1 + 294 FIG021764: Possible membrane protein Cell division cluster containing FtsZ and FtsW
fig|6666666.67508.peg.431 CDS gi|356606872|emb|CAFW01000095.1| 2367 3476 3 + 1110 FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria Cell division cluster containing FtsZ and FtsW
fig|6666666.67508.peg.432 CDS gi|356606872|emb|CAFW01000095.1| 3550 3708 1 + 159 hypothetical protein - none -
fig|6666666.67508.peg.433 CDS gi|356606872|emb|CAFW01000095.1| 3997 7140 1 + 3144 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.67508.peg.434 CDS gi|356606872|emb|CAFW01000095.1| 7180 7758 1 + 579 hypothetical protein - none -
fig|6666666.67508.peg.435 CDS gi|356606872|emb|CAFW01000095.1| 7808 8782 2 + 975 putative transcriptional regulator - none -
fig|6666666.67508.peg.436 CDS gi|356606872|emb|CAFW01000095.1| 8784 9647 3 + 864 permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.67508.peg.437 CDS gi|356606872|emb|CAFW01000095.1| 11236 9743 -1 - 1494 Multiple polyol-specific dehydrogenase (EC 1.1.1.-) - none -
fig|6666666.67508.peg.438 CDS gi|356606872|emb|CAFW01000095.1| 12556 11243 -1 - 1314 Ribitol/Xylitol/Arabitol transporter, MFS superfamily - none -
fig|6666666.67508.peg.439 CDS gi|356606872|emb|CAFW01000095.1| 12698 13513 2 + 816 Transcriptional regulator, DeoR family - none -
fig|6666666.67508.peg.440 CDS gi|356606872|emb|CAFW01000095.1| 13533 14903 3 + 1371 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.67508.peg.441 CDS gi|356606886|emb|CAFW01000094.1| 366 82 -3 - 285 hypothetical protein - none -
fig|6666666.67508.peg.442 CDS gi|356606886|emb|CAFW01000094.1| 1169 1360 2 + 192 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) of siderophore biosynthesis - none -
fig|6666666.67508.peg.443 CDS gi|356606886|emb|CAFW01000094.1| 1338 2501 3 + 1164 Isochorismate synthase (EC 5.4.4.2) of siderophore biosynthesis Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67508.peg.444 CDS gi|356606886|emb|CAFW01000094.1| 3506 2724 -2 - 783 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67508.peg.445 CDS gi|356606886|emb|CAFW01000094.1| 4606 3503 -1 - 1104 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67508.peg.446 CDS gi|356606886|emb|CAFW01000094.1| 5640 4606 -3 - 1035 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67508.peg.447 CDS gi|356606886|emb|CAFW01000094.1| 6969 5887 -3 - 1083 Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) Siderophore Enterobactin
fig|6666666.67508.peg.448 CDS gi|356606886|emb|CAFW01000094.1| 7104 8669 3 + 1566 iron aquisition yersiniabactin synthesis enzyme (Irp2) - none -
fig|6666666.67508.peg.449 CDS gi|356606886|emb|CAFW01000094.1| 8680 14475 1 + 5796 hypothetical protein - none -
fig|6666666.67508.peg.450 CDS gi|356606886|emb|CAFW01000094.1| 15368 17065 2 + 1698 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58) - none -
fig|6666666.67508.peg.451 CDS gi|356606886|emb|CAFW01000094.1| 17167 17310 1 + 144 hypothetical protein - none -
fig|6666666.67508.peg.452 CDS gi|356606886|emb|CAFW01000094.1| 17271 18158 3 + 888 Iron-chelator utilization protein - none -
fig|6666666.67508.peg.453 CDS gi|356606886|emb|CAFW01000094.1| 18286 18414 1 + 129 hypothetical protein - none -
fig|6666666.67508.peg.454 CDS gi|356606886|emb|CAFW01000094.1| 18551 19438 2 + 888 FIG00544982: hypothetical protein - none -
fig|6666666.67508.peg.455 CDS gi|356606886|emb|CAFW01000094.1| 19442 19975 2 + 534 MUTT/NUDIX FAMILY PROTEIN - none -
fig|6666666.67508.peg.456 CDS gi|356606886|emb|CAFW01000094.1| 20027 20959 2 + 933 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.67508.peg.457 CDS gi|356606886|emb|CAFW01000094.1| 22479 20971 -3 - 1509 putative transmembrane efflux protein - none -
fig|6666666.67508.peg.458 CDS gi|356606886|emb|CAFW01000094.1| 24062 22626 -2 - 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.459 CDS gi|356606886|emb|CAFW01000094.1| 24336 24806 3 + 471 FIG00543905: hypothetical protein - none -
fig|6666666.67508.peg.460 CDS gi|356606886|emb|CAFW01000094.1| 25747 24962 -1 - 786 Transmembrane protein MT2276, clustered with lipoate gene - none -
fig|6666666.67508.peg.461 CDS gi|356606886|emb|CAFW01000094.1| 25733 25900 2 + 168 hypothetical protein - none -
fig|6666666.67508.peg.462 CDS gi|356606886|emb|CAFW01000094.1| 26978 25890 -2 - 1089 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67508.peg.463 CDS gi|356606886|emb|CAFW01000094.1| 28036 27215 -1 - 822 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.67508.peg.464 CDS gi|356606886|emb|CAFW01000094.1| 28483 28094 -1 - 390 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67508.peg.465 CDS gi|356606886|emb|CAFW01000094.1| 29852 28698 -2 - 1155 oxidoreductase - none -
fig|6666666.67508.peg.466 CDS gi|356606886|emb|CAFW01000094.1| 30264 29944 -3 - 321 hypothetical protein - none -
fig|6666666.67508.peg.467 CDS gi|356606886|emb|CAFW01000094.1| 31632 30529 -3 - 1104 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67508.peg.468 CDS gi|356606886|emb|CAFW01000094.1| 34494 31636 -3 - 2859 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.67508.peg.469 CDS gi|356606886|emb|CAFW01000094.1| 36578 34836 -2 - 1743 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Dehydrogenase complexes
fig|6666666.67508.peg.470 CDS gi|356606886|emb|CAFW01000094.1| 36936 37346 3 + 411 Putative oxidoreductase - none -
fig|6666666.67508.peg.471 CDS gi|356606886|emb|CAFW01000094.1| 38914 37433 -1 - 1482 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
Dehydrogenase complexes
fig|6666666.67508.peg.472 CDS gi|356606886|emb|CAFW01000094.1| 38999 40102 2 + 1104 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.473 CDS gi|356606886|emb|CAFW01000094.1| 41203 40199 -1 - 1005 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - none -
fig|6666666.67508.peg.474 CDS gi|356606886|emb|CAFW01000094.1| 41914 41213 -1 - 702 CblZ, a non-orthologous displasment for Alpha-ribazole-5@1-phosphate phosphatase - none -
fig|6666666.67508.peg.475 CDS gi|356606886|emb|CAFW01000094.1| 42160 42504 1 + 345 probable iron binding protein from the HesB_IscA_SufA family Iron-sulfur cluster assembly
fig|6666666.67508.peg.476 CDS gi|356606886|emb|CAFW01000094.1| 44517 42601 -3 - 1917 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamate and Aspartate uptake in Bacteria;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67508.peg.477 CDS gi|356606886|emb|CAFW01000094.1| 44898 45992 3 + 1095 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67508.peg.478 CDS gi|356606886|emb|CAFW01000094.1| 46014 46445 3 + 432 Probable cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) - none -
fig|6666666.67508.peg.479 CDS gi|356606886|emb|CAFW01000094.1| 47116 47619 1 + 504 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) CBSS-316057.3.peg.563;
Terminal cytochrome C oxidases
fig|6666666.67508.peg.480 CDS gi|356606886|emb|CAFW01000094.1| 47701 48597 1 + 897 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67508.peg.481 CDS gi|356606886|emb|CAFW01000094.1| 48594 49814 3 + 1221 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67508.peg.482 CDS gi|356606886|emb|CAFW01000094.1| 49814 51436 2 + 1623 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) Ubiquinone Menaquinone-cytochrome c reductase complexes
fig|6666666.67508.peg.483 CDS gi|356606886|emb|CAFW01000094.1| 52676 53326 2 + 651 putative secreted protein - none -
fig|6666666.67508.peg.484 CDS gi|356606886|emb|CAFW01000094.1| 53636 54724 2 + 1089 NLP/P60 family protein - none -
fig|6666666.67508.peg.485 CDS gi|356606886|emb|CAFW01000094.1| 54746 55882 2 + 1137 Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) - none -
fig|6666666.67508.peg.486 CDS gi|356606886|emb|CAFW01000094.1| 55940 56878 2 + 939 ROK family protein (putative glucokinase) - none -
fig|6666666.67508.peg.487 CDS gi|356606886|emb|CAFW01000094.1| 56933 57676 2 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.488 CDS gi|356606886|emb|CAFW01000094.1| 57673 58806 1 + 1134 hypothetical membrane protein - none -
fig|6666666.67508.peg.489 CDS gi|356606886|emb|CAFW01000094.1| 58794 59324 3 + 531 FIG00544385: hypothetical protein - none -
fig|6666666.67508.peg.490 CDS gi|356606886|emb|CAFW01000094.1| 59454 60851 3 + 1398 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.491 CDS gi|356606886|emb|CAFW01000094.1| 62548 60965 -1 - 1584 Probable serine/threonine-protein kinase pknL (EC 2.7.11.1) - none -
fig|6666666.67508.peg.492 CDS gi|356606886|emb|CAFW01000094.1| 62639 63004 2 + 366 Conserved hypothetical regulatory protein - none -
fig|6666666.67508.peg.493 CDS gi|356606886|emb|CAFW01000094.1| 64583 63009 -2 - 1575 Carotene biosynthesis associated membrane protein - none -
fig|6666666.67508.peg.494 CDS gi|356606886|emb|CAFW01000094.1| 65693 64593 -2 - 1101 Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) - none -
fig|6666666.67508.peg.495 CDS gi|356606886|emb|CAFW01000094.1| 66291 65725 -3 - 567 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67508.peg.496 CDS gi|356606886|emb|CAFW01000094.1| 66545 66997 2 + 453 FIG00544752: hypothetical protein - none -
fig|6666666.67508.peg.497 CDS gi|356606886|emb|CAFW01000094.1| 67232 67636 2 + 405 FIG017342: transmembrane protein - none -
fig|6666666.67508.peg.498 CDS gi|356606886|emb|CAFW01000094.1| 68141 68575 2 + 435 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67508.peg.499 CDS gi|356606886|emb|CAFW01000094.1| 68777 69823 2 + 1047 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.67508.peg.500 CDS gi|356606886|emb|CAFW01000094.1| 69867 70709 3 + 843 FIG00544004: hypothetical protein - none -
fig|6666666.67508.peg.501 CDS gi|356606886|emb|CAFW01000094.1| 71052 73094 3 + 2043 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.502 CDS gi|356606886|emb|CAFW01000094.1| 73162 74922 1 + 1761 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67508.peg.503 CDS gi|356606886|emb|CAFW01000094.1| 74919 76454 3 + 1536 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67508.peg.504 CDS gi|356606886|emb|CAFW01000094.1| 76473 77582 3 + 1110 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.67508.peg.505 CDS gi|356606886|emb|CAFW01000094.1| 77601 79013 3 + 1413 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67508.peg.506 CDS gi|356606886|emb|CAFW01000094.1| 79010 80641 2 + 1632 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67508.peg.507 CDS gi|356606886|emb|CAFW01000094.1| 80651 81745 2 + 1095 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis
fig|6666666.67508.peg.508 CDS gi|356606886|emb|CAFW01000094.1| 81746 83179 2 + 1434 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Cell division cluster containing FtsZ and FtsW;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67508.peg.509 CDS gi|356606886|emb|CAFW01000094.1| 83180 83839 2 + 660 Cell division protein FtsQ homolog Bacterial Cytoskeleton
fig|6666666.67508.peg.510 CDS gi|356606886|emb|CAFW01000094.1| 84025 85287 1 + 1263 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division cluster containing FtsZ and FtsW
fig|6666666.67508.peg.511 CDS gi|356606957|emb|CAFW01000093.1| 426 620 3 + 195 Mobile element protein - none -
fig|6666666.67508.peg.512 CDS gi|356606959|emb|CAFW01000091.1| 1425 670 -3 - 756 Petrobactin ABC transporter, ATP-binding protein Petrobactin-mediated iron uptake system
fig|6666666.67508.peg.513 CDS gi|356606959|emb|CAFW01000091.1| 2447 1422 -2 - 1026 Petrobactin ABC transporter, permease protein II Petrobactin-mediated iron uptake system
fig|6666666.67508.peg.514 CDS gi|356606959|emb|CAFW01000091.1| 3492 2461 -3 - 1032 Petrobactin ABC transporter, permease protein I Petrobactin-mediated iron uptake system
fig|6666666.67508.peg.515 CDS gi|356606959|emb|CAFW01000091.1| 4653 3610 -3 - 1044 Petrobactin ABC transporter, periplasmic binding protein Petrobactin-mediated iron uptake system
fig|6666666.67508.peg.516 CDS gi|356606959|emb|CAFW01000091.1| 6348 4945 -3 - 1404 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67508.peg.517 CDS gi|356606959|emb|CAFW01000091.1| 8056 6350 -1 - 1707 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.67508.peg.518 CDS gi|356606959|emb|CAFW01000091.1| 8669 8310 -2 - 360 FIG016027: protein of unknown function YeaO - none -
fig|6666666.67508.peg.519 CDS gi|356606959|emb|CAFW01000091.1| 10658 9504 -2 - 1155 hypothetical protein - none -
fig|6666666.67508.peg.520 CDS gi|356606959|emb|CAFW01000091.1| 12270 13295 3 + 1026 ABC transporter, ATP-binding protein - none -
fig|6666666.67508.peg.521 CDS gi|356606959|emb|CAFW01000091.1| 13292 14608 2 + 1317 hypothetical protein - none -
fig|6666666.67508.peg.522 CDS gi|356606959|emb|CAFW01000091.1| 16956 16447 -3 - 510 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.67508.peg.523 CDS gi|356606959|emb|CAFW01000091.1| 17985 17083 -3 - 903 Cell division protein FtsX Bacterial Cell Division
fig|6666666.67508.peg.524 CDS gi|356606959|emb|CAFW01000091.1| 18614 17988 -2 - 627 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67508.peg.525 CDS gi|356606959|emb|CAFW01000091.1| 19898 18795 -2 - 1104 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.67508.peg.526 CDS gi|356606959|emb|CAFW01000091.1| 19897 20802 1 + 906 archaeal fructose-1,6-bisphosphatase - none -
fig|6666666.67508.peg.527 CDS gi|356606959|emb|CAFW01000091.1| 20795 21577 2 + 783 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67508.peg.528 CDS gi|356606959|emb|CAFW01000091.1| 21665 21877 2 + 213 hypothetical protein - none -
fig|6666666.67508.peg.529 CDS gi|356606959|emb|CAFW01000091.1| 21877 22347 1 + 471 hypothetical protein - none -
fig|6666666.67508.peg.530 CDS gi|356606959|emb|CAFW01000091.1| 23717 22575 -2 - 1143 No significant database matches - none -
fig|6666666.67508.peg.531 CDS gi|356606959|emb|CAFW01000091.1| 24218 24078 -2 - 141 hypothetical protein - none -
fig|6666666.67508.peg.532 CDS gi|356606959|emb|CAFW01000091.1| 24604 25740 1 + 1137 hypothetical protein - none -
fig|6666666.67508.peg.533 CDS gi|356606959|emb|CAFW01000091.1| 25895 26194 2 + 300 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.67508.peg.534 CDS gi|356606959|emb|CAFW01000091.1| 26208 27302 3 + 1095 Plasmid maintenance system antidote protein - none -
fig|6666666.67508.peg.535 CDS gi|356606987|emb|CAFW01000089.1| 70 333 1 + 264 FIG00545064: hypothetical protein - none -
fig|6666666.67508.peg.536 CDS gi|356606987|emb|CAFW01000089.1| 357 1343 3 + 987 Beta-lactamase (EC 3.5.2.6) Beta-lactamase
fig|6666666.67508.peg.537 CDS gi|356606987|emb|CAFW01000089.1| 1346 1636 2 + 291 FIG00546807: hypothetical protein - none -
fig|6666666.67508.peg.538 CDS gi|356606987|emb|CAFW01000089.1| 2583 1633 -3 - 951 vitamin-B12 independent methionine synthase family protein - none -
fig|6666666.67508.peg.539 CDS gi|356606987|emb|CAFW01000089.1| 3660 2593 -3 - 1068 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.67508.peg.540 CDS gi|356606987|emb|CAFW01000089.1| 3706 4560 1 + 855 Spermidine synthase-like protein - none -
fig|6666666.67508.peg.541 CDS gi|356606987|emb|CAFW01000089.1| 5014 4898 -1 - 117 hypothetical protein - none -
fig|6666666.67508.peg.542 CDS gi|356606987|emb|CAFW01000089.1| 5588 5469 -2 - 120 hypothetical protein - none -
fig|6666666.67508.peg.543 CDS gi|356606987|emb|CAFW01000089.1| 6636 5602 -3 - 1035 Putative hydrolase - none -
fig|6666666.67508.peg.544 CDS gi|356606987|emb|CAFW01000089.1| 7988 6861 -2 - 1128 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly
fig|6666666.67508.peg.545 CDS gi|356606987|emb|CAFW01000089.1| 8929 7988 -1 - 942 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67508.peg.546 CDS gi|356606987|emb|CAFW01000089.1| 9746 8943 -2 - 804 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate
fig|6666666.67508.peg.547 CDS gi|356606987|emb|CAFW01000089.1| 11061 9856 -3 - 1206 SAM-dependent methyltransferase - none -
fig|6666666.67508.peg.548 CDS gi|356606987|emb|CAFW01000089.1| 11921 11037 -2 - 885 FIG00996530: hypothetical protein - none -
fig|6666666.67508.peg.549 CDS gi|356606987|emb|CAFW01000089.1| 12945 12061 -3 - 885 ABC transporter, ATP-binding protein - none -
fig|6666666.67508.peg.550 CDS gi|356606987|emb|CAFW01000089.1| 13127 15037 2 + 1911 Putative glucanase glgE (EC 3.2.1.-) Trehalose Biosynthesis
fig|6666666.67508.peg.551 CDS gi|356606987|emb|CAFW01000089.1| 15137 17257 2 + 2121 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67508.peg.552 CDS gi|356606987|emb|CAFW01000089.1| 18301 17363 -1 - 939 COG3118: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.67508.peg.553 CDS gi|356606987|emb|CAFW01000089.1| 18650 18336 -2 - 315 FIG00544011: hypothetical protein - none -
fig|6666666.67508.peg.554 CDS gi|356606987|emb|CAFW01000089.1| 18987 18751 -3 - 237 hypothetical protein - none -
fig|6666666.67508.peg.555 CDS gi|356606987|emb|CAFW01000089.1| 19608 19366 -3 - 243 putative ATP/GTP-binding protein, doubtful CDS - none -
fig|6666666.67508.peg.556 CDS gi|356606987|emb|CAFW01000089.1| 20338 19709 -1 - 630 FIG00996186: hypothetical protein - none -
fig|6666666.67508.peg.557 CDS gi|356606987|emb|CAFW01000089.1| 21059 20496 -2 - 564 FIG00544079: hypothetical protein - none -
fig|6666666.67508.peg.558 CDS gi|356606987|emb|CAFW01000089.1| 21802 21431 -1 - 372 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.559 CDS gi|356606987|emb|CAFW01000089.1| 23258 21813 -2 - 1446 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.560 CDS gi|356606987|emb|CAFW01000089.1| 24251 23262 -2 - 990 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.561 CDS gi|356606987|emb|CAFW01000089.1| 25954 24314 -1 - 1641 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.562 CDS gi|356606987|emb|CAFW01000089.1| 26834 26019 -2 - 816 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.563 CDS gi|356606987|emb|CAFW01000089.1| 27410 26841 -2 - 570 ATP synthase B chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.564 CDS gi|356606987|emb|CAFW01000089.1| 27697 27458 -1 - 240 ATP synthase C chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.565 CDS gi|356606987|emb|CAFW01000089.1| 28598 27801 -2 - 798 ATP synthase A chain (EC 3.6.3.14) - none -
fig|6666666.67508.peg.566 CDS gi|356606987|emb|CAFW01000089.1| 29795 29355 -2 - 441 ATP synthase protein I - none -
fig|6666666.67508.peg.567 CDS gi|356606987|emb|CAFW01000089.1| 31080 29875 -3 - 1206 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.67508.peg.568 CDS gi|356606987|emb|CAFW01000089.1| 31854 31084 -3 - 771 Sua5 YciO YrdC YwlC family protein - none -
fig|6666666.67508.peg.569 CDS gi|356606987|emb|CAFW01000089.1| 32852 31968 -2 - 885 Methylase of polypeptide chain release factors - none -
fig|6666666.67508.peg.570 CDS gi|356606987|emb|CAFW01000089.1| 33936 32860 -3 - 1077 Peptide chain release factor 1 Translation termination factors bacterial
fig|6666666.67508.peg.571 CDS gi|356606987|emb|CAFW01000089.1| 36170 33936 -2 - 2235 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.67508.peg.572 CDS gi|356606987|emb|CAFW01000089.1| 36490 38280 1 + 1791 acyl-CoA synthetase - none -
fig|6666666.67508.peg.573 CDS gi|356606987|emb|CAFW01000089.1| 38896 38330 -1 - 567 Molybdenum cofactor biosynthesis protein MoaB ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67508.peg.574 CDS gi|356606987|emb|CAFW01000089.1| 39139 40497 1 + 1359 Nitrate/nitrite transporter Nitrate and nitrite ammonification
fig|6666666.67508.peg.575 CDS gi|356606987|emb|CAFW01000089.1| 40539 44315 3 + 3777 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67508.peg.576 CDS gi|356606987|emb|CAFW01000089.1| 44315 45919 2 + 1605 Respiratory nitrate reductase beta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67508.peg.577 CDS gi|356606987|emb|CAFW01000089.1| 45938 46810 2 + 873 Respiratory nitrate reductase delta chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67508.peg.578 CDS gi|356606987|emb|CAFW01000089.1| 46823 47737 2 + 915 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) Denitrifying reductase gene clusters;
Nitrate and nitrite ammonification
fig|6666666.67508.peg.579 CDS gi|356606987|emb|CAFW01000089.1| 47992 48780 1 + 789 FIG00544995: hypothetical protein - none -
fig|6666666.67508.peg.580 CDS gi|356606987|emb|CAFW01000089.1| 48842 50044 2 + 1203 Molybdenum cofactor biosynthesis protein MoaA ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67508.peg.581 CDS gi|356606987|emb|CAFW01000089.1| 50086 51375 1 + 1290 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67508.peg.582 CDS gi|356606987|emb|CAFW01000089.1| 51473 51949 2 + 477 Molybdenum cofactor biosynthesis protein MoaC ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.67508.peg.583 CDS gi|356606987|emb|CAFW01000089.1| 51999 52631 3 + 633 FIG00546849: hypothetical protein - none -
fig|6666666.67508.peg.584 CDS gi|356606987|emb|CAFW01000089.1| 52747 53007 1 + 261 FIG00545205: hypothetical protein - none -
fig|6666666.67508.peg.585 CDS gi|356606987|emb|CAFW01000089.1| 53144 53917 2 + 774 FIG00544995: hypothetical protein - none -
fig|6666666.67508.peg.586 CDS gi|356606987|emb|CAFW01000089.1| 56597 53907 -2 - 2691 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Lactate utilization
fig|6666666.67508.peg.587 CDS gi|356606987|emb|CAFW01000089.1| 57051 57818 3 + 768 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) - none -
fig|6666666.67508.peg.588 CDS gi|356606987|emb|CAFW01000089.1| 57842 59779 2 + 1938 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) - none -
fig|6666666.67508.peg.589 CDS gi|356606987|emb|CAFW01000089.1| 60866 59937 -2 - 930 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67508.peg.590 CDS gi|356606987|emb|CAFW01000089.1| 62231 60897 -2 - 1335 Homoserine dehydrogenase (EC 1.1.1.3) Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67508.peg.591 CDS gi|356606987|emb|CAFW01000089.1| 63907 62570 -1 - 1338 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.592 CDS gi|356606987|emb|CAFW01000089.1| 65564 63912 -2 - 1653 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.67508.peg.593 CDS gi|356606987|emb|CAFW01000089.1| 65944 67614 1 + 1671 L-lactate permease Lactate utilization
fig|6666666.67508.peg.594 CDS gi|356606987|emb|CAFW01000089.1| 67852 68637 1 + 786 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.67508.peg.595 CDS gi|356606987|emb|CAFW01000089.1| 68637 70169 3 + 1533 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.67508.peg.596 CDS gi|356606987|emb|CAFW01000089.1| 70173 70802 3 + 630 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Lactate utilization
fig|6666666.67508.peg.597 CDS gi|356606987|emb|CAFW01000089.1| 70998 72563 3 + 1566 predicted hydrolase or acyltransferase - none -
fig|6666666.67508.peg.598 CDS gi|356606987|emb|CAFW01000089.1| 73035 72862 -3 - 174 hypothetical protein - none -
fig|6666666.67508.peg.599 CDS gi|356606987|emb|CAFW01000089.1| 73464 73153 -3 - 312 FIG00546113: hypothetical protein - none -
fig|6666666.67508.peg.600 CDS gi|356606987|emb|CAFW01000089.1| 73840 73616 -1 - 225 FIG00543943: hypothetical protein - none -
fig|6666666.67508.peg.601 CDS gi|356606987|emb|CAFW01000089.1| 74502 74026 -3 - 477 Transcriptional regulator, MarR family - none -
fig|6666666.67508.peg.602 CDS gi|356606987|emb|CAFW01000089.1| 77328 74674 -3 - 2655 hypothetical protein - none -
fig|6666666.67508.peg.603 CDS gi|356606987|emb|CAFW01000089.1| 78448 77330 -1 - 1119 DNA double-strand break repair protein Mre11 - none -
fig|6666666.67508.peg.604 CDS gi|356606987|emb|CAFW01000089.1| 79653 78541 -3 - 1113 FIG00545674: hypothetical protein - none -
fig|6666666.67508.peg.605 CDS gi|356606987|emb|CAFW01000089.1| 82839 79657 -3 - 3183 Helicase, SNF2/RAD54 family - none -
fig|6666666.67508.peg.606 CDS gi|356606987|emb|CAFW01000089.1| 83169 84725 3 + 1557 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67508.peg.607 CDS gi|356606987|emb|CAFW01000089.1| 85249 85884 1 + 636 FIG00544279: hypothetical protein - none -
fig|6666666.67508.peg.608 CDS gi|356607060|emb|CAFW01000088.1| 383 99 -2 - 285 hypothetical protein - none -
fig|6666666.67508.peg.609 CDS gi|356607060|emb|CAFW01000088.1| 765 433 -3 - 333 Mrr restriction system protein - none -
fig|6666666.67508.peg.610 CDS gi|356607060|emb|CAFW01000088.1| 2285 867 -2 - 1419 hypothetical protein - none -
fig|6666666.67508.peg.611 CDS gi|356607060|emb|CAFW01000088.1| 4005 2572 -3 - 1434 hypothetical protein - none -
fig|6666666.67508.peg.612 CDS gi|356607060|emb|CAFW01000088.1| 5729 4008 -2 - 1722 hypothetical protein - none -
fig|6666666.67508.peg.613 CDS gi|356607060|emb|CAFW01000088.1| 6536 5811 -2 - 726 Putative predicted metal-dependent hydrolase Restriction-Modification System
fig|6666666.67508.peg.614 CDS gi|356607060|emb|CAFW01000088.1| 9483 6523 -3 - 2961 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67508.peg.615 CDS gi|356607060|emb|CAFW01000088.1| 10802 9606 -2 - 1197 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67508.peg.616 CDS gi|356607060|emb|CAFW01000088.1| 13258 10799 -1 - 2460 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.67508.peg.618 CDS gi|356607060|emb|CAFW01000088.1| 16663 15239 -1 - 1425 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.67508.peg.619 CDS gi|356607060|emb|CAFW01000088.1| 16935 17987 3 + 1053 Isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.67508.peg.620 CDS gi|356607060|emb|CAFW01000088.1| 19245 18259 -3 - 987 hypothetical protein - none -
fig|6666666.67508.peg.621 CDS gi|356607060|emb|CAFW01000088.1| 20556 19744 -3 - 813 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) Central meta-cleavage pathway of aromatic compound degradation
fig|6666666.67508.peg.622 CDS gi|356607060|emb|CAFW01000088.1| 21364 20726 -1 - 639 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67508.peg.623 CDS gi|356607060|emb|CAFW01000088.1| 23236 21380 -1 - 1857 Predicted signal-transduction protein containing cAMP-binding and CBS domains CBSS-342610.3.peg.1536;
cAMP signaling in bacteria
fig|6666666.67508.peg.624 CDS gi|356607060|emb|CAFW01000088.1| 24914 23247 -2 - 1668 FIG00545237: hypothetical protein - none -
fig|6666666.67508.peg.625 CDS gi|356607060|emb|CAFW01000088.1| 26094 25078 -3 - 1017 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67508.peg.626 CDS gi|356607060|emb|CAFW01000088.1| 26264 26842 2 + 579 hypothetical protein - none -
fig|6666666.67508.peg.627 CDS gi|356607060|emb|CAFW01000088.1| 28551 26965 -3 - 1587 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67508.peg.628 CDS gi|356607060|emb|CAFW01000088.1| 29638 28709 -1 - 930 Putative lipoprotein - none -
fig|6666666.67508.peg.629 CDS gi|356607060|emb|CAFW01000088.1| 31618 29804 -1 - 1815 M. jannaschii predicted coding region MJ0686 - none -
fig|6666666.67508.peg.630 CDS gi|356607060|emb|CAFW01000088.1| 32934 31918 -3 - 1017 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67508.peg.631 CDS gi|356607060|emb|CAFW01000088.1| 33678 33157 -3 - 522 Acetolactate synthase small subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67508.peg.632 CDS gi|356607060|emb|CAFW01000088.1| 35546 33678 -2 - 1869 Acetolactate synthase large subunit (EC 2.2.1.6) Acetoin, butanediol metabolism;
Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.67508.peg.633 CDS gi|356607060|emb|CAFW01000088.1| 35964 36629 3 + 666 Putative low molecular weight protein antigen 6 - none -
fig|6666666.67508.peg.634 CDS gi|356607060|emb|CAFW01000088.1| 36780 38633 3 + 1854 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67508.peg.635 CDS gi|356607060|emb|CAFW01000088.1| 38766 40106 3 + 1341 FIG00546232: hypothetical protein - none -
fig|6666666.67508.peg.636 CDS gi|356607060|emb|CAFW01000088.1| 41589 40207 -3 - 1383 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD - none -
fig|6666666.67508.peg.637 CDS gi|356607060|emb|CAFW01000088.1| 41765 42853 2 + 1089 Glutathione S-transferase domain protein Single-Rhodanese-domain proteins
fig|6666666.67508.peg.638 CDS gi|356607060|emb|CAFW01000088.1| 43780 42899 -1 - 882 lysine export regulator protein - none -
fig|6666666.67508.peg.639 CDS gi|356607060|emb|CAFW01000088.1| 45886 44492 -1 - 1395 Benzoate transport protein Benzoate degradation
fig|6666666.67508.peg.640 CDS gi|356607060|emb|CAFW01000088.1| 46415 45891 -2 - 525 FIG00545305: hypothetical protein - none -
fig|6666666.67508.peg.641 CDS gi|356607060|emb|CAFW01000088.1| 48121 46607 -1 - 1515 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67508.peg.642 CDS gi|356607060|emb|CAFW01000088.1| 49239 48175 -3 - 1065 Sodium-dependent transporter - none -
fig|6666666.67508.peg.643 CDS gi|356607060|emb|CAFW01000088.1| 50830 50432 -1 - 399 hypothetical protein - none -
fig|6666666.67508.peg.644 CDS gi|356607060|emb|CAFW01000088.1| 52044 50962 -3 - 1083 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.67508.peg.645 CDS gi|356607060|emb|CAFW01000088.1| 53463 52057 -3 - 1407 permease of the major facilitator superfamily - none -
fig|6666666.67508.peg.646 CDS gi|356607060|emb|CAFW01000088.1| 54703 53474 -1 - 1230 major facilitator superfamily MFS_1 - none -
fig|6666666.67508.peg.647 CDS gi|356607060|emb|CAFW01000088.1| 54774 55097 3 + 324 Conserved putative integral membrane protein - none -
fig|6666666.67508.peg.648 CDS gi|356607060|emb|CAFW01000088.1| 56072 55212 -2 - 861 siderophore-interacting protein - none -
fig|6666666.67508.peg.649 CDS gi|356607060|emb|CAFW01000088.1| 57748 56264 -1 - 1485 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67508.peg.650 CDS gi|356607060|emb|CAFW01000088.1| 58045 57749 -1 - 297 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.67508.peg.651 CDS gi|356607060|emb|CAFW01000088.1| 58246 58914 1 + 669 FIG00544014: hypothetical protein - none -
fig|6666666.67508.peg.652 CDS gi|356607060|emb|CAFW01000088.1| 59094 59414 3 + 321 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.67508.peg.653 CDS gi|356607060|emb|CAFW01000088.1| 59416 59787 1 + 372 hypothetical protein - none -
fig|6666666.67508.peg.654 CDS gi|356607060|emb|CAFW01000088.1| 61904 59814 -2 - 2091 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.67508.peg.655 CDS gi|356607060|emb|CAFW01000088.1| 61984 62664 1 + 681 FIG00544413: hypothetical protein - none -
fig|6666666.67508.peg.656 CDS gi|356607060|emb|CAFW01000088.1| 62789 63331 2 + 543 FIG00545064: hypothetical protein - none -
fig|6666666.67508.peg.657 CDS gi|356607110|emb|CAFW01000087.1| 90 494 3 + 405 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.67508.peg.658 CDS gi|356607110|emb|CAFW01000087.1| 514 1119 1 + 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.67508.peg.659 CDS gi|356607110|emb|CAFW01000087.1| 1243 2247 1 + 1005 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.67508.peg.660 CDS gi|356607110|emb|CAFW01000087.1| 2319 2849 3 + 531 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.67508.peg.661 CDS gi|356607110|emb|CAFW01000087.1| 3778 3338 -1 - 441 hypothetical protein - none -
fig|6666666.67508.peg.662 CDS gi|356607110|emb|CAFW01000087.1| 4157 4888 2 + 732 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67508.peg.663 CDS gi|356607110|emb|CAFW01000087.1| 5042 6235 2 + 1194 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67508.peg.664 CDS gi|356607110|emb|CAFW01000087.1| 6859 6975 1 + 117 hypothetical protein - none -
fig|6666666.67508.peg.665 CDS gi|356607110|emb|CAFW01000087.1| 8656 7373 -1 - 1284 FIG00544388: hypothetical protein - none -
fig|6666666.67508.peg.666 CDS gi|356607110|emb|CAFW01000087.1| 8830 12465 1 + 3636 FtsK/SpoIIIE family protein - none -
fig|6666666.67508.peg.667 CDS gi|356607110|emb|CAFW01000087.1| 12469 13488 1 + 1020 FIG00543916: hypothetical protein - none -
fig|6666666.67508.peg.668 CDS gi|356607110|emb|CAFW01000087.1| 13617 13931 3 + 315 FIG00543840: hypothetical protein - none -
fig|6666666.67508.peg.669 CDS gi|356607110|emb|CAFW01000087.1| 13984 14271 1 + 288 FIG00544893: hypothetical protein - none -
fig|6666666.67508.peg.670 CDS gi|356607110|emb|CAFW01000087.1| 14437 14297 -1 - 141 hypothetical protein - none -
fig|6666666.67508.peg.671 CDS gi|356607110|emb|CAFW01000087.1| 14573 15016 2 + 444 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.67508.peg.672 CDS gi|356607110|emb|CAFW01000087.1| 15016 15555 1 + 540 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.67508.peg.673 CDS gi|356607110|emb|CAFW01000087.1| 15687 17030 3 + 1344 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67508.peg.674 CDS gi|356607110|emb|CAFW01000087.1| 17154 17468 3 + 315 FIG00544418: hypothetical protein - none -
fig|6666666.67508.peg.675 CDS gi|356607110|emb|CAFW01000087.1| 17465 19093 2 + 1629 No significant database matches. High concentration of alanine, glycine and proline residues - none -
fig|6666666.67508.peg.676 CDS gi|356607110|emb|CAFW01000087.1| 19093 19503 1 + 411 FIG00546731: hypothetical protein - none -
fig|6666666.67508.peg.677 CDS gi|356607110|emb|CAFW01000087.1| 20365 19505 -1 - 861 FIG00545792: hypothetical protein - none -
fig|6666666.67508.peg.678 CDS gi|356607110|emb|CAFW01000087.1| 20567 22432 2 + 1866 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67508.peg.679 CDS gi|356607110|emb|CAFW01000087.1| 22452 23552 3 + 1101 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.680 CDS gi|356607110|emb|CAFW01000087.1| 23549 24040 2 + 492 ATPase YjeE, predicted to have essential role in cell wall biosynthesis - none -
fig|6666666.67508.peg.681 CDS gi|356607110|emb|CAFW01000087.1| 24142 24615 1 + 474 FIG00546178: hypothetical protein - none -
fig|6666666.67508.peg.682 CDS gi|356607110|emb|CAFW01000087.1| 24615 25313 3 + 699 Inactive homolog of metal-dependent proteases, putative molecular chaperone - none -
fig|6666666.67508.peg.683 CDS gi|356607110|emb|CAFW01000087.1| 25314 25805 3 + 492 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.67508.peg.684 CDS gi|356607110|emb|CAFW01000087.1| 25802 26857 2 + 1056 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA - none -
fig|6666666.67508.peg.685 CDS gi|356607110|emb|CAFW01000087.1| 26998 27450 1 + 453 FIG00543939: hypothetical protein - none -
fig|6666666.67508.peg.686 CDS gi|356607110|emb|CAFW01000087.1| 27702 27995 3 + 294 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.67508.peg.687 CDS gi|356607110|emb|CAFW01000087.1| 28016 29635 2 + 1620 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67508.peg.688 CDS gi|356607110|emb|CAFW01000087.1| 29749 32091 1 + 2343 Excinuclease ABC subunit A paralog of unknown function DNA repair, UvrABC system
fig|6666666.67508.peg.689 CDS gi|356607110|emb|CAFW01000087.1| 33529 32078 -1 - 1452 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.690 CDS gi|356607110|emb|CAFW01000087.1| 33997 33656 -1 - 342 Sporulation regulatory protein WhiD WhiB and WhiB-type regulatory proteins
fig|6666666.67508.peg.691 CDS gi|356607110|emb|CAFW01000087.1| 34501 35067 1 + 567 putative RNA polymerase sigma factor - none -
fig|6666666.67508.peg.692 CDS gi|356607110|emb|CAFW01000087.1| 35153 36004 2 + 852 FIG00544252: hypothetical protein - none -
fig|6666666.67508.peg.693 CDS gi|356607110|emb|CAFW01000087.1| 36639 36250 -3 - 390 FIG00544572: hypothetical protein - none -
fig|6666666.67508.peg.694 CDS gi|356607110|emb|CAFW01000087.1| 36781 38301 1 + 1521 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67508.peg.695 CDS gi|356607110|emb|CAFW01000087.1| 38317 39447 1 + 1131 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.67508.peg.696 CDS gi|356607110|emb|CAFW01000087.1| 40461 39511 -3 - 951 FIG00547072: hypothetical protein - none -
fig|6666666.67508.peg.697 CDS gi|356607110|emb|CAFW01000087.1| 40546 41484 1 + 939 transcriptional regulator - none -
fig|6666666.67508.peg.698 CDS gi|356607110|emb|CAFW01000087.1| 41474 41998 2 + 525 Membrane-associated phospholipid phosphatase - none -
fig|6666666.67508.peg.699 CDS gi|356607110|emb|CAFW01000087.1| 42008 43582 2 + 1575 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.67508.peg.700 CDS gi|356607110|emb|CAFW01000087.1| 44291 43668 -2 - 624 hypothetical protein - none -
fig|6666666.67508.peg.701 CDS gi|356607110|emb|CAFW01000087.1| 45460 44450 -1 - 1011 hypothetical protein - none -
fig|6666666.67508.peg.702 CDS gi|356607155|emb|CAFW01000086.1| 2037 670 -3 - 1368 FAD linked oxidase domain protein - none -
fig|6666666.67508.peg.703 CDS gi|356607155|emb|CAFW01000086.1| 2776 2315 -1 - 462 hypothetical protein - none -
fig|6666666.67508.peg.704 CDS gi|356607155|emb|CAFW01000086.1| 4863 3916 -3 - 948 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67508.peg.705 CDS gi|356607155|emb|CAFW01000086.1| 4899 5924 3 + 1026 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.67508.peg.706 CDS gi|356607155|emb|CAFW01000086.1| 6024 7958 3 + 1935 Von Willebrand factor type A domain protein - none -
fig|6666666.67508.peg.707 CDS gi|356607155|emb|CAFW01000086.1| 8619 7963 -3 - 657 two-component system response regulator - none -
fig|6666666.67508.peg.708 CDS gi|356607155|emb|CAFW01000086.1| 9516 8629 -3 - 888 putative two-component system sensor kinase - none -
fig|6666666.67508.peg.709 CDS gi|356607155|emb|CAFW01000086.1| 9515 10222 2 + 708 ABC transporter - none -
fig|6666666.67508.peg.710 CDS gi|356607155|emb|CAFW01000086.1| 10219 11625 1 + 1407 FIG00545866: hypothetical protein - none -
fig|6666666.67508.peg.711 CDS gi|356607155|emb|CAFW01000086.1| 11618 12586 2 + 969 putative nisin resistance protein - none -
fig|6666666.67508.peg.712 CDS gi|356607155|emb|CAFW01000086.1| 12598 13155 1 + 558 pericardin - none -
fig|6666666.67508.peg.713 CDS gi|356607155|emb|CAFW01000086.1| 13187 14815 2 + 1629 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67508.peg.714 CDS gi|356607155|emb|CAFW01000086.1| 14821 15255 1 + 435 FIG00543979: hypothetical protein - none -
fig|6666666.67508.peg.715 CDS gi|356607155|emb|CAFW01000086.1| 15438 16625 3 + 1188 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67508.peg.716 CDS gi|356607155|emb|CAFW01000086.1| 16636 17331 1 + 696 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.67508.peg.717 CDS gi|356607155|emb|CAFW01000086.1| 18653 17439 -2 - 1215 Possible oxidoreductase (EC 1.-.-.-) - none -
fig|6666666.67508.peg.718 CDS gi|356607155|emb|CAFW01000086.1| 18763 19752 1 + 990 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis
fig|6666666.67508.peg.719 CDS gi|356607155|emb|CAFW01000086.1| 21708 20083 -3 - 1626 CitH citrate transporter Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67508.peg.720 CDS gi|356607155|emb|CAFW01000086.1| 21938 23617 2 + 1680 Signal transduction histidine kinase CitA regulating citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67508.peg.721 CDS gi|356607155|emb|CAFW01000086.1| 23618 24274 2 + 657 Response regulator CitB of citrate metabolism Citrate Utilization System (CitAB, CitH, and tctABC)
fig|6666666.67508.peg.722 CDS gi|356607155|emb|CAFW01000086.1| 24955 25272 1 + 318 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.67508.peg.723 CDS gi|356607155|emb|CAFW01000086.1| 25370 26338 2 + 969 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.67508.peg.724 CDS gi|356607155|emb|CAFW01000086.1| 26504 26950 2 + 447 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67508.peg.725 CDS gi|356607155|emb|CAFW01000086.1| 27032 27736 2 + 705 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67508.peg.726 CDS gi|356607155|emb|CAFW01000086.1| 28175 28387 2 + 213 hypothetical protein - none -
fig|6666666.67508.peg.727 CDS gi|356607155|emb|CAFW01000086.1| 28658 29173 2 + 516 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67508.peg.728 CDS gi|356607155|emb|CAFW01000086.1| 29250 29633 3 + 384 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.67508.peg.729 CDS gi|356607155|emb|CAFW01000086.1| 30310 29726 -1 - 585 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.730 CDS gi|356607155|emb|CAFW01000086.1| 30420 30806 3 + 387 hypothetical protein - none -
fig|6666666.67508.peg.731 CDS gi|356607155|emb|CAFW01000086.1| 30850 31863 1 + 1014 Putative oxidoreductase YncB Broadly distributed proteins not in subsystems;
Quinone oxidoreductase family
fig|6666666.67508.peg.732 CDS gi|356607155|emb|CAFW01000086.1| 32858 31902 -2 - 957 FIG00544143: hypothetical protein - none -
fig|6666666.67508.peg.733 CDS gi|356607155|emb|CAFW01000086.1| 33378 36875 3 + 3498 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67508.peg.734 CDS gi|356607155|emb|CAFW01000086.1| 37024 41019 1 + 3996 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.67508.peg.735 CDS gi|356607155|emb|CAFW01000086.1| 41322 41927 3 + 606 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67508.peg.736 CDS gi|356607155|emb|CAFW01000086.1| 41927 43282 2 + 1356 Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters
fig|6666666.67508.peg.737 CDS gi|356607155|emb|CAFW01000086.1| 43275 44045 3 + 771 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine ECF class transporters;
Thiamin biosynthesis
fig|6666666.67508.peg.738 CDS gi|356607155|emb|CAFW01000086.1| 44290 45033 1 + 744 putative adenylate kinase - none -
fig|6666666.67508.peg.739 CDS gi|356607155|emb|CAFW01000086.1| 45347 45718 2 + 372 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67508.peg.740 CDS gi|356607155|emb|CAFW01000086.1| 45725 46192 2 + 468 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.67508.peg.741 CDS gi|356607155|emb|CAFW01000086.1| 46558 48687 1 + 2130 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.67508.peg.742 CDS gi|356607155|emb|CAFW01000086.1| 49076 50266 2 + 1191 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial
fig|6666666.67508.peg.743 CDS gi|356607155|emb|CAFW01000086.1| 53153 50379 -2 - 2775 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67508.peg.744 CDS gi|356607155|emb|CAFW01000086.1| 53273 53953 2 + 681 FIG00544889: hypothetical protein - none -
fig|6666666.67508.peg.745 CDS gi|356607155|emb|CAFW01000086.1| 54567 54010 -3 - 558 FIG00544560: hypothetical protein - none -
fig|6666666.67508.peg.746 CDS gi|356607155|emb|CAFW01000086.1| 55444 54560 -1 - 885 FIG00546262: hypothetical protein - none -
fig|6666666.67508.peg.747 CDS gi|356607155|emb|CAFW01000086.1| 56354 55437 -2 - 918 FIG00546590: hypothetical protein - none -
fig|6666666.67508.peg.748 CDS gi|356607155|emb|CAFW01000086.1| 56545 56354 -1 - 192 FIG00544001: hypothetical protein - none -
fig|6666666.67508.peg.749 CDS gi|356607155|emb|CAFW01000086.1| 56894 56586 -2 - 309 FIG00545243: hypothetical protein - none -
fig|6666666.67508.peg.750 CDS gi|356607155|emb|CAFW01000086.1| 57548 56985 -2 - 564 Alkaline shock protein 23 - none -
fig|6666666.67508.peg.751 CDS gi|356607155|emb|CAFW01000086.1| 58307 58612 2 + 306 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.67508.peg.752 CDS gi|356607155|emb|CAFW01000086.1| 58645 59298 1 + 654 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.67508.peg.753 CDS gi|356607155|emb|CAFW01000086.1| 59295 59960 3 + 666 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.67508.peg.754 CDS gi|356607155|emb|CAFW01000086.1| 59953 60255 1 + 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.67508.peg.755 CDS gi|356607155|emb|CAFW01000086.1| 60284 61120 2 + 837 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.67508.peg.756 CDS gi|356607155|emb|CAFW01000086.1| 61134 61412 3 + 279 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.67508.peg.757 CDS gi|356607155|emb|CAFW01000086.1| 61416 61778 3 + 363 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.67508.peg.758 CDS gi|356607155|emb|CAFW01000086.1| 61778 62521 2 + 744 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.67508.peg.759 CDS gi|356607155|emb|CAFW01000086.1| 62525 62941 2 + 417 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.67508.peg.760 CDS gi|356607155|emb|CAFW01000086.1| 62941 63171 1 + 231 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.67508.peg.761 CDS gi|356607155|emb|CAFW01000086.1| 63174 63458 3 + 285 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.67508.peg.762 CDS gi|356607155|emb|CAFW01000086.1| 65550 63574 -3 - 1977 PTS system, sucrose-specific IIB component (EC 2.7.1.69) / PTS system, sucrose-specific IIC component (EC 2.7.1.69) / PTS system, sucrose-specific IIA component (EC 2.7.1.69) - none -
fig|6666666.67508.peg.763 CDS gi|356607155|emb|CAFW01000086.1| 66959 65646 -2 - 1314 Sucrose-6-phosphate hydrolase (EC 3.2.1.26) - none -
fig|6666666.67508.peg.764 CDS gi|356607155|emb|CAFW01000086.1| 67278 68198 3 + 921 hypothetical protein - none -
fig|6666666.67508.peg.765 CDS gi|356607155|emb|CAFW01000086.1| 69123 68407 -3 - 717 hypothetical protein - none -
fig|6666666.67508.peg.766 CDS gi|356607155|emb|CAFW01000086.1| 69998 69279 -2 - 720 FIG00549538: hypothetical protein - none -
fig|6666666.67508.peg.767 CDS gi|356607155|emb|CAFW01000086.1| 70139 70840 2 + 702 Nudix-related transcriptional regulator NrtR NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.768 CDS gi|356607155|emb|CAFW01000086.1| 71058 71426 3 + 369 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.67508.peg.769 CDS gi|356607155|emb|CAFW01000086.1| 71431 71745 1 + 315 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.67508.peg.770 CDS gi|356607155|emb|CAFW01000086.1| 71748 72299 3 + 552 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.67508.peg.771 CDS gi|356607155|emb|CAFW01000086.1| 72514 73299 1 + 786 formate/nitrite transporter family protein - none -
fig|6666666.67508.peg.772 CDS gi|356607155|emb|CAFW01000086.1| 74138 73296 -2 - 843 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67508.peg.773 CDS gi|356607155|emb|CAFW01000086.1| 74419 74138 -1 - 282 FIG00544084: hypothetical protein - none -
fig|6666666.67508.peg.774 CDS gi|356607155|emb|CAFW01000086.1| 74746 75129 1 + 384 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.67508.peg.775 CDS gi|356607155|emb|CAFW01000086.1| 75145 75681 1 + 537 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.67508.peg.776 CDS gi|356607155|emb|CAFW01000086.1| 75685 76086 1 + 402 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.67508.peg.777 CDS gi|356607155|emb|CAFW01000086.1| 76121 76741 2 + 621 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.67508.peg.778 CDS gi|356607155|emb|CAFW01000086.1| 76746 76931 3 + 186 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.67508.peg.779 CDS gi|356607155|emb|CAFW01000086.1| 76937 77386 2 + 450 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.67508.peg.780 CDS gi|356607155|emb|CAFW01000086.1| 77675 79003 2 + 1329 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.67508.peg.781 CDS gi|356607155|emb|CAFW01000086.1| 79003 79548 1 + 546 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.67508.peg.782 CDS gi|356607155|emb|CAFW01000086.1| 79549 80346 1 + 798 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67508.peg.783 CDS gi|356607155|emb|CAFW01000086.1| 80389 81177 1 + 789 Putative secreted protein - none -
fig|6666666.67508.peg.784 CDS gi|356607155|emb|CAFW01000086.1| 82127 82246 2 + 120 hypothetical protein - none -
fig|6666666.67508.peg.785 CDS gi|356607155|emb|CAFW01000086.1| 82294 82512 1 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.67508.peg.786 CDS gi|356607155|emb|CAFW01000086.1| 82697 83065 2 + 369 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.67508.peg.787 CDS gi|356607242|emb|CAFW01000085.1| 544 1503 1 + 960 hypothetical protein - none -
fig|6666666.67508.peg.788 CDS gi|356607242|emb|CAFW01000085.1| 2401 1514 -1 - 888 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.67508.peg.789 CDS gi|356607242|emb|CAFW01000085.1| 3979 2549 -1 - 1431 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.67508.peg.790 CDS gi|356607242|emb|CAFW01000085.1| 5418 4138 -3 - 1281 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.67508.peg.791 CDS gi|356607242|emb|CAFW01000085.1| 5678 6250 2 + 573 hypothetical protein - none -
fig|6666666.67508.peg.792 CDS gi|356607242|emb|CAFW01000085.1| 8062 6290 -1 - 1773 hypothetical protein - none -
fig|6666666.67508.peg.793 CDS gi|356607242|emb|CAFW01000085.1| 9525 8071 -3 - 1455 Lanthionine biosynthesis protein LanB Lanthionine Synthetases
fig|6666666.67508.peg.794 CDS gi|356607242|emb|CAFW01000085.1| 9659 9946 2 + 288 hypothetical protein - none -
fig|6666666.67508.peg.795 CDS gi|356607248|emb|CAFW01000084.1| 1752 484 -3 - 1269 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67508.peg.796 CDS gi|356607248|emb|CAFW01000084.1| 2603 1764 -2 - 840 Putative transcriptional regulator - none -
fig|6666666.67508.peg.797 CDS gi|356607248|emb|CAFW01000084.1| 2900 3835 2 + 936 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67508.peg.798 CDS gi|356607248|emb|CAFW01000084.1| 3957 4529 3 + 573 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67508.peg.799 CDS gi|356607248|emb|CAFW01000084.1| 4978 4658 -1 - 321 predicted acetyltransferase - none -
fig|6666666.67508.peg.800 CDS gi|356607248|emb|CAFW01000084.1| 5313 5029 -3 - 285 predicted acetyltransferase - none -
fig|6666666.67508.peg.801 CDS gi|356607248|emb|CAFW01000084.1| 7757 5748 -2 - 2010 hypothetical protein - none -
fig|6666666.67508.peg.802 CDS gi|356607248|emb|CAFW01000084.1| 8241 8573 3 + 333 FIG00544615: hypothetical protein - none -
fig|6666666.67508.peg.803 CDS gi|356607248|emb|CAFW01000084.1| 8661 9188 3 + 528 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67508.peg.804 CDS gi|356607248|emb|CAFW01000084.1| 9210 9698 3 + 489 RNA polymerase, sigma-24 subunit, ECF subfamily - none -
fig|6666666.67508.peg.805 CDS gi|356607248|emb|CAFW01000084.1| 9691 10281 1 + 591 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.67508.peg.806 CDS gi|356607248|emb|CAFW01000084.1| 10287 10925 3 + 639 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67508.peg.807 CDS gi|356607248|emb|CAFW01000084.1| 10922 11851 2 + 930 hypothetical protein - none -
fig|6666666.67508.peg.808 CDS gi|356607248|emb|CAFW01000084.1| 12303 11836 -3 - 468 hypothetical protein - none -
fig|6666666.67508.peg.809 CDS gi|356607248|emb|CAFW01000084.1| 12820 12332 -1 - 489 hypothetical protein - none -
fig|6666666.67508.peg.810 CDS gi|356607248|emb|CAFW01000084.1| 13973 12861 -2 - 1113 cytochrome P450-like putative monoxygenase,C-terminal fragment - none -
fig|6666666.67508.peg.811 CDS gi|356607248|emb|CAFW01000084.1| 15905 14406 -2 - 1500 putative coenzyme A transferase - none -
fig|6666666.67508.peg.812 CDS gi|356607248|emb|CAFW01000084.1| 16141 17286 1 + 1146 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.67508.peg.813 CDS gi|356607248|emb|CAFW01000084.1| 17397 18125 3 + 729 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67508.peg.814 CDS gi|356607248|emb|CAFW01000084.1| 19092 18319 -3 - 774 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67508.peg.815 CDS gi|356607248|emb|CAFW01000084.1| 20049 19132 -3 - 918 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67508.peg.816 CDS gi|356607248|emb|CAFW01000084.1| 21177 20062 -3 - 1116 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.67508.peg.817 CDS gi|356607248|emb|CAFW01000084.1| 22448 21318 -2 - 1131 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.67508.peg.818 CDS gi|356607248|emb|CAFW01000084.1| 23615 22695 -2 - 921 Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD Glutathione analogs: mycothiol
fig|6666666.67508.peg.819 CDS gi|356607248|emb|CAFW01000084.1| 23689 24495 1 + 807 FIG00544976: hypothetical protein - none -
fig|6666666.67508.peg.820 CDS gi|356607248|emb|CAFW01000084.1| 25625 24513 -2 - 1113 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - none -
fig|6666666.67508.peg.821 CDS gi|356607248|emb|CAFW01000084.1| 25673 26377 2 + 705 DUF1794 Iron-sulfur cluster assembly
fig|6666666.67508.peg.822 CDS gi|356607248|emb|CAFW01000084.1| 27222 26374 -3 - 849 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67508.peg.823 CDS gi|356607248|emb|CAFW01000084.1| 27365 28444 2 + 1080 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress Iron-sulfur cluster assembly
fig|6666666.67508.peg.824 CDS gi|356607248|emb|CAFW01000084.1| 28729 28944 1 + 216 FIG00544089: hypothetical protein - none -
fig|6666666.67508.peg.825 CDS gi|356607248|emb|CAFW01000084.1| 30221 29166 -2 - 1056 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.67508.peg.826 CDS gi|356607248|emb|CAFW01000084.1| 31736 30237 -2 - 1500 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.67508.peg.827 CDS gi|356607248|emb|CAFW01000084.1| 32191 31820 -1 - 372 FIG00544811: hypothetical protein - none -
fig|6666666.67508.peg.828 CDS gi|356607248|emb|CAFW01000084.1| 32254 33306 1 + 1053 acyl-CoA hydrolase - none -
fig|6666666.67508.peg.829 CDS gi|356607248|emb|CAFW01000084.1| 34137 33361 -3 - 777 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.67508.peg.830 CDS gi|356607248|emb|CAFW01000084.1| 34280 35680 2 + 1401 Antigen 85-B precursor (85B) (Extracellular alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl transferase 85B) (EC 2.3.1.-) - none -
fig|6666666.67508.peg.831 CDS gi|356607248|emb|CAFW01000084.1| 36037 35765 -1 - 273 hypothetical protein - none -
fig|6666666.67508.peg.832 CDS gi|356607248|emb|CAFW01000084.1| 36079 36192 1 + 114 hypothetical protein - none -
fig|6666666.67508.peg.833 CDS gi|356607248|emb|CAFW01000084.1| 36553 36314 -1 - 240 hypothetical protein - none -
fig|6666666.67508.peg.834 CDS gi|356607248|emb|CAFW01000084.1| 36909 38546 3 + 1638 TPP-requiring enzyme co-localized with fatty acid metabolic genes - none -
fig|6666666.67508.peg.835 CDS gi|356607248|emb|CAFW01000084.1| 39662 38562 -2 - 1101 hypothetical protein - none -
fig|6666666.67508.peg.836 CDS gi|356607248|emb|CAFW01000084.1| 42163 39887 -1 - 2277 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67508.peg.837 CDS gi|356607248|emb|CAFW01000084.1| 42850 42173 -1 - 678 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67508.peg.838 CDS gi|356607248|emb|CAFW01000084.1| 43094 42852 -2 - 243 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.67508.peg.839 CDS gi|356607248|emb|CAFW01000084.1| 43416 45830 3 + 2415 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.67508.peg.840 CDS gi|356607248|emb|CAFW01000084.1| 46543 47268 1 + 726 ABC-type transport systems, periplasmic component - none -
fig|6666666.67508.peg.841 CDS gi|356607248|emb|CAFW01000084.1| 47964 47287 -3 - 678 FIG00546625: hypothetical protein - none -
fig|6666666.67508.peg.842 CDS gi|356607248|emb|CAFW01000084.1| 49146 48076 -3 - 1071 Protease II (EC 3.4.21.83) - none -
fig|6666666.67508.peg.843 CDS gi|356607297|emb|CAFW01000083.1| 81 1211 3 + 1131 ATP-dependent DNA helicase rep (EC 3.6.1.-) - none -
fig|6666666.67508.peg.844 CDS gi|356607297|emb|CAFW01000083.1| 2050 1214 -1 - 837 transcriptional regulator - none -
fig|6666666.67508.peg.845 CDS gi|356607297|emb|CAFW01000083.1| 2834 2070 -2 - 765 Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67508.peg.846 CDS gi|356607297|emb|CAFW01000083.1| 3652 2831 -1 - 822 Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67508.peg.847 CDS gi|356607297|emb|CAFW01000083.1| 4443 3649 -3 - 795 Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67508.peg.848 CDS gi|356607297|emb|CAFW01000083.1| 5411 4440 -2 - 972 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.67508.peg.849 CDS gi|356607297|emb|CAFW01000083.1| 6068 5418 -2 - 651 FIG00546289: hypothetical protein - none -
fig|6666666.67508.peg.850 CDS gi|356607297|emb|CAFW01000083.1| 6237 7274 3 + 1038 FIG00546797: hypothetical protein - none -
fig|6666666.67508.peg.851 CDS gi|356607297|emb|CAFW01000083.1| 7775 7335 -2 - 441 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67508.peg.852 CDS gi|356607297|emb|CAFW01000083.1| 8278 7829 -1 - 450 Universal stress protein UspA and related nucleotide-binding proteins - none -
fig|6666666.67508.peg.853 CDS gi|356607297|emb|CAFW01000083.1| 10422 8335 -3 - 2088 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.67508.peg.854 CDS gi|356607297|emb|CAFW01000083.1| 11040 10441 -3 - 600 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.67508.peg.855 CDS gi|356607297|emb|CAFW01000083.1| 11858 11037 -2 - 822 Beta-glucoside bgl operon antiterminator, BglG family - none -
fig|6666666.67508.peg.856 CDS gi|356607297|emb|CAFW01000083.1| 13840 11870 -1 - 1971 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific - none -
fig|6666666.67508.peg.857 CDS gi|356607297|emb|CAFW01000083.1| 15728 14259 -2 - 1470 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.67508.peg.858 CDS gi|356607297|emb|CAFW01000083.1| 15735 15908 3 + 174 hypothetical protein - none -
fig|6666666.67508.peg.859 CDS gi|356607297|emb|CAFW01000083.1| 15933 16406 3 + 474 FIG00545637: hypothetical protein - none -
fig|6666666.67508.peg.860 CDS gi|356607297|emb|CAFW01000083.1| 16487 17635 2 + 1149 No significant database matches - none -
fig|6666666.67508.peg.861 CDS gi|356607297|emb|CAFW01000083.1| 20262 17632 -3 - 2631 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.67508.peg.862 CDS gi|356607297|emb|CAFW01000083.1| 21407 20598 -2 - 810 Iron-chelator utilization protein - none -
fig|6666666.67508.peg.863 CDS gi|356607297|emb|CAFW01000083.1| 22708 21497 -1 - 1212 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.864 CDS gi|356607297|emb|CAFW01000083.1| 22791 23144 3 + 354 hypothetical protein - none -
fig|6666666.67508.peg.865 CDS gi|356607297|emb|CAFW01000083.1| 23207 24031 2 + 825 Putative membrane protein - none -
fig|6666666.67508.peg.866 CDS gi|356607297|emb|CAFW01000083.1| 24032 24898 2 + 867 ABC-type amino acid transport system, secreted component - none -
fig|6666666.67508.peg.867 CDS gi|356607297|emb|CAFW01000083.1| 24895 25812 1 + 918 amino acid ABC transporter, permease protein (glnP) - none -
fig|6666666.67508.peg.868 CDS gi|356607297|emb|CAFW01000083.1| 25805 26572 2 + 768 putative amino acid ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.869 CDS gi|356607297|emb|CAFW01000083.1| 27304 26564 -1 - 741 FIG00543922: hypothetical protein - none -
fig|6666666.67508.peg.870 CDS gi|356607297|emb|CAFW01000083.1| 27741 27301 -3 - 441 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
Coenzyme A Biosynthesis
fig|6666666.67508.peg.871 CDS gi|356607297|emb|CAFW01000083.1| 28342 27770 -1 - 573 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) - none -
fig|6666666.67508.peg.872 CDS gi|356607297|emb|CAFW01000083.1| 30465 28369 -3 - 2097 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.67508.peg.873 CDS gi|356607297|emb|CAFW01000083.1| 31740 30472 -3 - 1269 Dihydroxyacetone kinase family protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.874 CDS gi|356607297|emb|CAFW01000083.1| 32432 31806 -2 - 627 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.67508.peg.875 CDS gi|356607297|emb|CAFW01000083.1| 33448 32477 -1 - 972 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.67508.peg.876 CDS gi|356607297|emb|CAFW01000083.1| 33531 34409 3 + 879 Putative exported protein - none -
fig|6666666.67508.peg.877 CDS gi|356607297|emb|CAFW01000083.1| 34585 34752 1 + 168 hypothetical protein - none -
fig|6666666.67508.peg.878 CDS gi|356607297|emb|CAFW01000083.1| 34704 35297 3 + 594 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.879 CDS gi|356607297|emb|CAFW01000083.1| 36444 35371 -3 - 1074 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.67508.peg.880 CDS gi|356607297|emb|CAFW01000083.1| 37464 36463 -3 - 1002 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.881 CDS gi|356607297|emb|CAFW01000083.1| 37589 38590 2 + 1002 Possible hydrolase mutT1 (EC 3.-.-.-) - none -
fig|6666666.67508.peg.882 CDS gi|356607297|emb|CAFW01000083.1| 39438 38587 -3 - 852 C4-dicarboxylate transporter/malic acid transport protein - none -
fig|6666666.67508.peg.883 CDS gi|356607297|emb|CAFW01000083.1| 40199 39588 -2 - 612 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67508.peg.884 CDS gi|356607297|emb|CAFW01000083.1| 41715 40234 -3 - 1482 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67508.peg.885 CDS gi|356607297|emb|CAFW01000083.1| 41783 42448 2 + 666 Transcriptional regulator, IclR family - none -
fig|6666666.67508.peg.886 CDS gi|356607297|emb|CAFW01000083.1| 43442 42432 -2 - 1011 alpha/beta hydrolase fold - none -
fig|6666666.67508.peg.887 CDS gi|356607297|emb|CAFW01000083.1| 44215 43682 -1 - 534 Gluconate transporter family protein D-gluconate and ketogluconates metabolism
fig|6666666.67508.peg.888 CDS gi|356607297|emb|CAFW01000083.1| 44963 44241 -2 - 723 Gluconate transporter family protein D-gluconate and ketogluconates metabolism
fig|6666666.67508.peg.889 CDS gi|356607297|emb|CAFW01000083.1| 45943 45347 -1 - 597 FIG00547295: hypothetical protein - none -
fig|6666666.67508.peg.890 CDS gi|356607297|emb|CAFW01000083.1| 46227 46883 3 + 657 hypothetical protein - none -
fig|6666666.67508.peg.891 CDS gi|356607297|emb|CAFW01000083.1| 47034 47507 3 + 474 hypothetical protein - none -
fig|6666666.67508.peg.892 CDS gi|356607297|emb|CAFW01000083.1| 48683 47514 -2 - 1170 hypothetical protein - none -
fig|6666666.67508.peg.893 CDS gi|356607297|emb|CAFW01000083.1| 49093 48710 -1 - 384 hypothetical protein - none -
fig|6666666.67508.peg.894 CDS gi|356607297|emb|CAFW01000083.1| 49347 49129 -3 - 219 hypothetical protein - none -
fig|6666666.67508.peg.895 CDS gi|356607297|emb|CAFW01000083.1| 49336 50229 1 + 894 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.67508.peg.896 CDS gi|356607297|emb|CAFW01000083.1| 50408 50226 -2 - 183 hypothetical protein - none -
fig|6666666.67508.peg.897 CDS gi|356607297|emb|CAFW01000083.1| 50367 50507 3 + 141 hypothetical protein - none -
fig|6666666.67508.peg.898 CDS gi|356607297|emb|CAFW01000083.1| 50909 51349 2 + 441 ElaA protein cAMP signaling in bacteria
fig|6666666.67508.peg.899 CDS gi|356607297|emb|CAFW01000083.1| 51612 51346 -3 - 267 Helix-turn-helix motif - none -
fig|6666666.67508.peg.900 CDS gi|356607297|emb|CAFW01000083.1| 53608 51731 -1 - 1878 hypothetical protein - none -
fig|6666666.67508.peg.901 CDS gi|356607297|emb|CAFW01000083.1| 53719 53838 1 + 120 hypothetical protein - none -
fig|6666666.67508.peg.902 CDS gi|356607297|emb|CAFW01000083.1| 53966 57682 2 + 3717 hypothetical protein - none -
fig|6666666.67508.peg.903 CDS gi|356607297|emb|CAFW01000083.1| 57718 62496 1 + 4779 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.67508.peg.904 CDS gi|356607297|emb|CAFW01000083.1| 64136 63360 -2 - 777 TesB-like acyl-CoA thioesterase 5 Acyl-CoA thioesterase II
fig|6666666.67508.peg.905 CDS gi|356607297|emb|CAFW01000083.1| 64537 64680 1 + 144 hypothetical protein - none -
fig|6666666.67508.peg.906 CDS gi|356607297|emb|CAFW01000083.1| 66060 64834 -3 - 1227 Benzoate transport protein Benzoate degradation
fig|6666666.67508.peg.907 CDS gi|356607297|emb|CAFW01000083.1| 66730 66101 -1 - 630 S-adenosylmethionine-dependent methyltransferase - none -
fig|6666666.67508.peg.908 CDS gi|356607297|emb|CAFW01000083.1| 68149 66740 -1 - 1410 hypothetical protein - none -
fig|6666666.67508.peg.909 CDS gi|356607297|emb|CAFW01000083.1| 68221 69435 1 + 1215 possible antigenic 85 complex protein - none -
fig|6666666.67508.peg.910 CDS gi|356607297|emb|CAFW01000083.1| 70370 69534 -2 - 837 FIG00544655: hypothetical protein - none -
fig|6666666.67508.peg.911 CDS gi|356607297|emb|CAFW01000083.1| 71061 70711 -3 - 351 Mobile element protein - none -
fig|6666666.67508.peg.912 CDS gi|356607359|emb|CAFW01000082.1| 1832 567 -2 - 1266 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.67508.peg.913 CDS gi|356607359|emb|CAFW01000082.1| 2000 1857 -2 - 144 UPF0434 protein YcaR - none -
fig|6666666.67508.peg.914 CDS gi|356607359|emb|CAFW01000082.1| 2605 2030 -1 - 576 hypothetical protein - none -
fig|6666666.67508.peg.915 CDS gi|356607359|emb|CAFW01000082.1| 4364 2757 -2 - 1608 FIG00543839: hypothetical protein - none -
fig|6666666.67508.peg.916 CDS gi|356607359|emb|CAFW01000082.1| 5477 4365 -2 - 1113 hypothetical protein - none -
fig|6666666.67508.peg.917 CDS gi|356607359|emb|CAFW01000082.1| 6417 5644 -3 - 774 Transcriptional regulator, AraC family - none -
fig|6666666.67508.peg.918 CDS gi|356607359|emb|CAFW01000082.1| 6592 7650 1 + 1059 hypothetical protein - none -
fig|6666666.67508.peg.919 CDS gi|356607359|emb|CAFW01000082.1| 8560 7715 -1 - 846 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.67508.peg.920 CDS gi|356607359|emb|CAFW01000082.1| 8818 9069 1 + 252 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.67508.peg.921 CDS gi|356607359|emb|CAFW01000082.1| 10649 9204 -2 - 1446 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67508.peg.922 CDS gi|356607359|emb|CAFW01000082.1| 11918 10698 -2 - 1221 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67508.peg.923 CDS gi|356607359|emb|CAFW01000082.1| 12717 12211 -3 - 507 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67508.peg.924 CDS gi|356607359|emb|CAFW01000082.1| 13747 12728 -1 - 1020 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67508.peg.925 CDS gi|356607359|emb|CAFW01000082.1| 15021 13804 -3 - 1218 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67508.peg.926 CDS gi|356607359|emb|CAFW01000082.1| 15953 15018 -2 - 936 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67508.peg.927 CDS gi|356607359|emb|CAFW01000082.1| 17199 15970 -3 - 1230 Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Biosynthesis extended
fig|6666666.67508.peg.928 CDS gi|356607359|emb|CAFW01000082.1| 18282 17230 -3 - 1053 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.67508.peg.929 CDS gi|356607359|emb|CAFW01000082.1| 21044 18558 -2 - 2487 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67508.peg.930 CDS gi|356607359|emb|CAFW01000082.1| 22112 21066 -2 - 1047 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.67508.peg.931 CDS gi|356607359|emb|CAFW01000082.1| 23086 22283 -1 - 804 FIG011178: rRNA methylase RNA methylation
fig|6666666.67508.peg.932 CDS gi|356607359|emb|CAFW01000082.1| 23737 23231 -1 - 507 FIG00548668: hypothetical protein - none -
fig|6666666.67508.peg.933 CDS gi|356607359|emb|CAFW01000082.1| 24307 23924 -1 - 384 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67508.peg.934 CDS gi|356607359|emb|CAFW01000082.1| 24557 24363 -2 - 195 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.67508.peg.935 CDS gi|356607359|emb|CAFW01000082.1| 24992 24648 -2 - 345 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.67508.peg.936 CDS gi|356607359|emb|CAFW01000082.1| 25282 25091 -1 - 192 hypothetical protein - none -
fig|6666666.67508.peg.937 CDS gi|356607359|emb|CAFW01000082.1| 26532 25489 -3 - 1044 FIG00545404: hypothetical protein - none -
fig|6666666.67508.peg.938 CDS gi|356607359|emb|CAFW01000082.1| 29496 26653 -3 - 2844 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.67508.peg.939 CDS gi|356607359|emb|CAFW01000082.1| 29570 30172 2 + 603 metallo-beta-lactamase superfamily protein - none -
fig|6666666.67508.peg.940 CDS gi|356607359|emb|CAFW01000082.1| 30291 31268 3 + 978 FIG00995839: hypothetical protein - none -
fig|6666666.67508.peg.941 CDS gi|356607388|emb|CAFW01000081.1| 702 1817 3 + 1116 hypothetical protein - none -
fig|6666666.67508.peg.942 CDS gi|356607388|emb|CAFW01000081.1| 2084 1836 -2 - 249 hypothetical protein - none -
fig|6666666.67508.peg.943 CDS gi|356607388|emb|CAFW01000081.1| 3317 2172 -2 - 1146 PLP-dependent aminotransferase - none -
fig|6666666.67508.peg.944 CDS gi|356607388|emb|CAFW01000081.1| 3964 3323 -1 - 642 FIG00546748: hypothetical protein - none -
fig|6666666.67508.peg.945 CDS gi|356607388|emb|CAFW01000081.1| 5645 4014 -2 - 1632 DNA repair helicase - none -
fig|6666666.67508.peg.946 CDS gi|356607388|emb|CAFW01000081.1| 7919 5679 -2 - 2241 FIG00545438: hypothetical protein - none -
fig|6666666.67508.peg.947 CDS gi|356607388|emb|CAFW01000081.1| 7985 8170 2 + 186 FIG00543815: hypothetical protein - none -
fig|6666666.67508.peg.948 CDS gi|356607388|emb|CAFW01000081.1| 9022 8390 -1 - 633 FIG00996461: hypothetical protein - none -
fig|6666666.67508.peg.949 CDS gi|356607388|emb|CAFW01000081.1| 10657 9551 -1 - 1107 short chain dehydrogenase - none -
fig|6666666.67508.peg.950 CDS gi|356607388|emb|CAFW01000081.1| 10797 11492 3 + 696 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.951 CDS gi|356607388|emb|CAFW01000081.1| 12217 11630 -1 - 588 FIG00545981: hypothetical protein - none -
fig|6666666.67508.peg.952 CDS gi|356607388|emb|CAFW01000081.1| 13148 12249 -2 - 900 glutamine cyclotransferase - none -
fig|6666666.67508.peg.953 CDS gi|356607388|emb|CAFW01000081.1| 13323 13943 3 + 621 FIG00546806: hypothetical protein - none -
fig|6666666.67508.peg.954 CDS gi|356607388|emb|CAFW01000081.1| 14248 15651 1 + 1404 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.67508.peg.955 CDS gi|356607388|emb|CAFW01000081.1| 15670 16464 1 + 795 putative rRNA methylase - none -
fig|6666666.67508.peg.956 CDS gi|356607388|emb|CAFW01000081.1| 17379 16492 -3 - 888 FIG00544583: hypothetical protein - none -
fig|6666666.67508.peg.957 CDS gi|356607388|emb|CAFW01000081.1| 18715 17462 -1 - 1254 FIG00545091: hypothetical protein - none -
fig|6666666.67508.peg.958 CDS gi|356607388|emb|CAFW01000081.1| 20014 18872 -1 - 1143 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67508.peg.959 CDS gi|356607388|emb|CAFW01000081.1| 20347 21639 1 + 1293 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67508.peg.960 CDS gi|356607388|emb|CAFW01000081.1| 22010 22369 2 + 360 FKBP-type peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.67508.peg.961 CDS gi|356607388|emb|CAFW01000081.1| 22530 23396 3 + 867 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67508.peg.962 CDS gi|356607388|emb|CAFW01000081.1| 23873 24217 2 + 345 FIG00544151: hypothetical protein - none -
fig|6666666.67508.peg.963 CDS gi|356607388|emb|CAFW01000081.1| 24223 25872 1 + 1650 putative transport protein - none -
fig|6666666.67508.peg.964 CDS gi|356607388|emb|CAFW01000081.1| 26295 26921 3 + 627 FIG00544899: hypothetical protein - none -
fig|6666666.67508.peg.965 CDS gi|356607388|emb|CAFW01000081.1| 27187 27555 1 + 369 hypothetical protein - none -
fig|6666666.67508.peg.966 CDS gi|356607388|emb|CAFW01000081.1| 28615 27662 -1 - 954 Putative secreted protein - none -
fig|6666666.67508.peg.967 CDS gi|356607388|emb|CAFW01000081.1| 28958 29647 2 + 690 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - none -
fig|6666666.67508.peg.968 CDS gi|356607388|emb|CAFW01000081.1| 30551 30853 2 + 303 FIG00544401: hypothetical protein - none -
fig|6666666.67508.peg.969 CDS gi|356607388|emb|CAFW01000081.1| 31170 30886 -3 - 285 POSSIBLE GLUTAREDOXIN PROTEIN - none -
fig|6666666.67508.peg.970 CDS gi|356607388|emb|CAFW01000081.1| 31708 31172 -1 - 537 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67508.peg.971 CDS gi|356607388|emb|CAFW01000081.1| 32530 31718 -1 - 813 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.67508.peg.972 CDS gi|356607388|emb|CAFW01000081.1| 33263 32541 -2 - 723 inositol monophosphatase family protein - none -
fig|6666666.67508.peg.973 CDS gi|356607388|emb|CAFW01000081.1| 33335 38392 2 + 5058 Probable ATP-dependent helicase lhr (EC 3.6.1.-) - none -
fig|6666666.67508.peg.974 CDS gi|356607388|emb|CAFW01000081.1| 38392 39225 1 + 834 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67508.peg.975 CDS gi|356607388|emb|CAFW01000081.1| 39515 39222 -2 - 294 hypothetical protein - none -
fig|6666666.67508.peg.976 CDS gi|356607388|emb|CAFW01000081.1| 40509 39841 -3 - 669 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.977 CDS gi|356607388|emb|CAFW01000081.1| 42350 40542 -2 - 1809 hypothetical protein - none -
fig|6666666.67508.peg.978 CDS gi|356607388|emb|CAFW01000081.1| 44193 42343 -3 - 1851 ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.979 CDS gi|356607388|emb|CAFW01000081.1| 44403 44816 3 + 414 POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.67508.peg.980 CDS gi|356607388|emb|CAFW01000081.1| 45095 45787 2 + 693 hypothetical protein - none -
fig|6666666.67508.peg.981 CDS gi|356607388|emb|CAFW01000081.1| 46581 45883 -3 - 699 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67508.peg.982 CDS gi|356607388|emb|CAFW01000081.1| 48346 46712 -1 - 1635 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.67508.peg.983 CDS gi|356607388|emb|CAFW01000081.1| 49902 48490 -3 - 1413 Histidine permease YuiF - none -
fig|6666666.67508.peg.984 CDS gi|356607388|emb|CAFW01000081.1| 50469 50095 -3 - 375 Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67508.peg.985 CDS gi|356607388|emb|CAFW01000081.1| 50551 53334 1 + 2784 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.67508.peg.986 CDS gi|356607388|emb|CAFW01000081.1| 54091 53339 -1 - 753 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67508.peg.987 CDS gi|356607388|emb|CAFW01000081.1| 56017 55220 -1 - 798 Phage peptidoglycan binding endopeptidase - none -
fig|6666666.67508.peg.988 CDS gi|356607388|emb|CAFW01000081.1| 56827 58590 1 + 1764 FIG021574: Possible membrane protein related to de Novo purine biosynthesis A hypothetical coupled to de Novo Purine Biosynthesis
fig|6666666.67508.peg.989 CDS gi|356607388|emb|CAFW01000081.1| 58698 59303 3 + 606 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67508.peg.990 CDS gi|356607388|emb|CAFW01000081.1| 59343 60890 3 + 1548 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
A hypothetical coupled to de Novo Purine Biosynthesis;
A hypothetical coupled to de Novo Purine Biosynthesis;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.67508.peg.991 CDS gi|356607388|emb|CAFW01000081.1| 63687 62410 -3 - 1278 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.67508.peg.992 CDS gi|356607388|emb|CAFW01000081.1| 64494 63817 -3 - 678 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.993 CDS gi|356607388|emb|CAFW01000081.1| 65339 64557 -2 - 783 No significant database matches - none -
fig|6666666.67508.peg.994 CDS gi|356607388|emb|CAFW01000081.1| 65773 65525 -1 - 249 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.67508.peg.995 CDS gi|356607388|emb|CAFW01000081.1| 66093 65788 -3 - 306 SSU ribosomal protein S14p (S29e) - none -
fig|6666666.67508.peg.996 CDS gi|356607388|emb|CAFW01000081.1| 66261 66097 -3 - 165 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.67508.peg.997 CDS gi|356607388|emb|CAFW01000081.1| 66500 66264 -2 - 237 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.67508.peg.998 CDS gi|356607388|emb|CAFW01000081.1| 67071 67337 3 + 267 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.67508.peg.999 CDS gi|356607388|emb|CAFW01000081.1| 67353 67526 3 + 174 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.67508.peg.1000 CDS gi|356607388|emb|CAFW01000081.1| 67750 69273 1 + 1524 Serine protease precursor MucD/AlgY associated with sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.67508.peg.1001 CDS gi|356607388|emb|CAFW01000081.1| 69330 69917 3 + 588 molybdopterin biosynthesis enzyme - none -
fig|6666666.67508.peg.1002 CDS gi|356607388|emb|CAFW01000081.1| 70103 70324 2 + 222 FIG00544516: hypothetical protein - none -
fig|6666666.67508.peg.1003 CDS gi|356607388|emb|CAFW01000081.1| 70861 70424 -1 - 438 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67508.peg.1004 CDS gi|356607388|emb|CAFW01000081.1| 71704 71036 -1 - 669 FIG00546567: hypothetical protein - none -
fig|6666666.67508.peg.1005 CDS gi|356607388|emb|CAFW01000081.1| 72419 71874 -2 - 546 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.67508.peg.1006 CDS gi|356607388|emb|CAFW01000081.1| 72476 73399 2 + 924 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67508.peg.1007 CDS gi|356607388|emb|CAFW01000081.1| 73403 74668 2 + 1266 Molybdopterin biosynthesis protein MoeA - none -
fig|6666666.67508.peg.1008 CDS gi|356607388|emb|CAFW01000081.1| 74686 75417 1 + 732 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation
fig|6666666.67508.peg.1009 CDS gi|356607388|emb|CAFW01000081.1| 75568 77178 1 + 1611 FIG00544639: hypothetical protein - none -
fig|6666666.67508.peg.1010 CDS gi|356607388|emb|CAFW01000081.1| 77958 77323 -3 - 636 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.67508.peg.1011 CDS gi|356607388|emb|CAFW01000081.1| 78068 78481 2 + 414 FIG00544115: hypothetical protein - none -
fig|6666666.67508.peg.1012 CDS gi|356607388|emb|CAFW01000081.1| 78468 79157 3 + 690 hypothetical membrane protein - none -
fig|6666666.67508.peg.1013 CDS gi|356607388|emb|CAFW01000081.1| 80346 79192 -3 - 1155 hypothetical protein - none -
fig|6666666.67508.peg.1014 CDS gi|356607388|emb|CAFW01000081.1| 80524 81429 1 + 906 hypothetical protein - none -
fig|6666666.67508.peg.1015 CDS gi|356607388|emb|CAFW01000081.1| 81927 81442 -3 - 486 hypothetical protein - none -
fig|6666666.67508.peg.1016 CDS gi|356607388|emb|CAFW01000081.1| 82710 81973 -3 - 738 Putative polysaccharide deacetylase - none -
fig|6666666.67508.peg.1017 CDS gi|356607388|emb|CAFW01000081.1| 82666 82908 1 + 243 hypothetical protein - none -
fig|6666666.67508.peg.1018 CDS gi|356607388|emb|CAFW01000081.1| 83472 82891 -3 - 582 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67508.peg.1019 CDS gi|356607388|emb|CAFW01000081.1| 83607 83795 3 + 189 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67508.peg.1020 CDS gi|356607388|emb|CAFW01000081.1| 83856 84140 3 + 285 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.67508.peg.1021 CDS gi|356607388|emb|CAFW01000081.1| 86133 84664 -3 - 1470 CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67508.peg.1022 CDS gi|356607388|emb|CAFW01000081.1| 86213 87061 2 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.67508.peg.1023 CDS gi|356607388|emb|CAFW01000081.1| 87273 87428 3 + 156 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.1024 CDS gi|356607388|emb|CAFW01000081.1| 87526 89127 1 + 1602 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.1025 CDS gi|356607388|emb|CAFW01000081.1| 89175 91037 3 + 1863 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.67508.peg.1026 CDS gi|356607388|emb|CAFW01000081.1| 91358 92608 2 + 1251 putative transport protein - none -
fig|6666666.67508.peg.1027 CDS gi|356607388|emb|CAFW01000081.1| 92657 93508 2 + 852 Putative deoxyribonuclease YcfH YcfH
fig|6666666.67508.peg.1028 CDS gi|356607388|emb|CAFW01000081.1| 93801 94949 3 + 1149 Cell wall-binding protein - none -
fig|6666666.67508.peg.1029 CDS gi|356607388|emb|CAFW01000081.1| 94971 95804 3 + 834 Dimethyladenosine transferase (EC 2.1.1.-) - none -
fig|6666666.67508.peg.1030 CDS gi|356607388|emb|CAFW01000081.1| 95812 96822 1 + 1011 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67508.peg.1031 CDS gi|356607388|emb|CAFW01000081.1| 96853 98727 1 + 1875 ABC transporter, ATP-binding protein - none -
fig|6666666.67508.peg.1032 CDS gi|356607388|emb|CAFW01000081.1| 98869 99420 1 + 552 FIG00545288: hypothetical protein - none -
fig|6666666.67508.peg.1033 CDS gi|356607388|emb|CAFW01000081.1| 100459 99617 -1 - 843 FIG01124361: hypothetical protein - none -
fig|6666666.67508.peg.1034 CDS gi|356607489|emb|CAFW01000080.1| 18 1148 3 + 1131 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.67508.peg.1035 CDS gi|356607489|emb|CAFW01000080.1| 1149 2927 3 + 1779 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.67508.peg.1036 CDS gi|356607489|emb|CAFW01000080.1| 3802 2924 -1 - 879 FIG00547517: hypothetical protein - none -
fig|6666666.67508.peg.1037 CDS gi|356607489|emb|CAFW01000080.1| 3857 4666 2 + 810 FIG00545841: hypothetical protein - none -
fig|6666666.67508.peg.1038 CDS gi|356607489|emb|CAFW01000080.1| 5620 4670 -1 - 951 Membrane protein, putative - none -
fig|6666666.67508.peg.1039 CDS gi|356607489|emb|CAFW01000080.1| 6252 5716 -3 - 537 FIG00544603: hypothetical protein - none -
fig|6666666.67508.peg.1040 CDS gi|356607489|emb|CAFW01000080.1| 6961 6254 -1 - 708 FIG00544264: hypothetical protein - none -
fig|6666666.67508.peg.1041 CDS gi|356607489|emb|CAFW01000080.1| 7574 9484 2 + 1911 GTP-binding protein TypA/BipA - none -
fig|6666666.67508.peg.1042 CDS gi|356607489|emb|CAFW01000080.1| 9563 11368 2 + 1806 LpqW - none -
fig|6666666.67508.peg.1043 CDS gi|356607489|emb|CAFW01000080.1| 11358 12335 3 + 978 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB Glutathione analogs: mycothiol
fig|6666666.67508.peg.1044 CDS gi|356607489|emb|CAFW01000080.1| 12310 12702 1 + 393 hypothetical membrane protein - none -
fig|6666666.67508.peg.1045 CDS gi|356607489|emb|CAFW01000080.1| 12847 13077 1 + 231 4Fe-4S ferredoxin, iron-sulfur binding Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1046 CDS gi|356607489|emb|CAFW01000080.1| 13100 14212 2 + 1113 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.1047 CDS gi|356607489|emb|CAFW01000080.1| 14365 14919 1 + 555 FIG00544080: hypothetical protein - none -
fig|6666666.67508.peg.1048 CDS gi|356607489|emb|CAFW01000080.1| 16120 14912 -1 - 1209 hypothetical protein - none -
fig|6666666.67508.peg.1049 CDS gi|356607489|emb|CAFW01000080.1| 17496 16525 -3 - 972 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.1050 CDS gi|356607489|emb|CAFW01000080.1| 18902 17556 -2 - 1347 Phenylalanine-specific permease - none -
fig|6666666.67508.peg.1051 CDS gi|356607489|emb|CAFW01000080.1| 18981 20111 3 + 1131 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.1052 CDS gi|356607489|emb|CAFW01000080.1| 20138 20965 2 + 828 FIG00543965: hypothetical protein - none -
fig|6666666.67508.peg.1053 CDS gi|356607489|emb|CAFW01000080.1| 20931 21803 3 + 873 Non functional Dihydropteroate synthase 2 - none -
fig|6666666.67508.peg.1054 CDS gi|356607489|emb|CAFW01000080.1| 21800 22597 2 + 798 Glycosyltransferases involved in cell wall biogenesis - none -
fig|6666666.67508.peg.1055 CDS gi|356607489|emb|CAFW01000080.1| 22594 22956 1 + 363 hypothetical protein - none -
fig|6666666.67508.peg.1056 CDS gi|356607489|emb|CAFW01000080.1| 23123 23290 2 + 168 FIG00545868: hypothetical protein - none -
fig|6666666.67508.peg.1057 CDS gi|356607489|emb|CAFW01000080.1| 23337 24206 3 + 870 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) RNA methylation
fig|6666666.67508.peg.1058 CDS gi|356607489|emb|CAFW01000080.1| 26053 24644 -1 - 1410 levanase/invertase - none -
fig|6666666.67508.peg.1059 CDS gi|356607489|emb|CAFW01000080.1| 27241 26087 -1 - 1155 Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type Glycogen metabolism
fig|6666666.67508.peg.1060 CDS gi|356607489|emb|CAFW01000080.1| 27409 28569 1 + 1161 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.67508.peg.1061 CDS gi|356607489|emb|CAFW01000080.1| 30197 29556 -2 - 642 FIG00945644: hypothetical protein - none -
fig|6666666.67508.peg.1062 CDS gi|356607489|emb|CAFW01000080.1| 30318 30905 3 + 588 putative RNA polymerase sigma factor - none -
fig|6666666.67508.peg.1063 CDS gi|356607489|emb|CAFW01000080.1| 30912 31349 3 + 438 FIG00544000: hypothetical protein - none -
fig|6666666.67508.peg.1064 CDS gi|356607489|emb|CAFW01000080.1| 31359 31943 3 + 585 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.67508.peg.1065 CDS gi|356607489|emb|CAFW01000080.1| 33076 31940 -1 - 1137 Mrp protein homolog - none -
fig|6666666.67508.peg.1066 CDS gi|356607489|emb|CAFW01000080.1| 33142 33837 1 + 696 FIG00544048: hypothetical protein - none -
fig|6666666.67508.peg.1067 CDS gi|356607489|emb|CAFW01000080.1| 34944 35246 3 + 303 hypothetical protein - none -
fig|6666666.67508.peg.1068 CDS gi|356607489|emb|CAFW01000080.1| 36223 36336 1 + 114 hypothetical protein - none -
fig|6666666.67508.peg.1069 CDS gi|356607489|emb|CAFW01000080.1| 36395 38071 2 + 1677 hypothetical protein - none -
fig|6666666.67508.peg.1070 CDS gi|356607489|emb|CAFW01000080.1| 38056 38178 1 + 123 hypothetical protein - none -
fig|6666666.67508.peg.1071 CDS gi|356607489|emb|CAFW01000080.1| 41930 38175 -2 - 3756 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) / 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
Dehydrogenase complexes;
TCA Cycle;
TCA Cycle
fig|6666666.67508.peg.1072 CDS gi|356607489|emb|CAFW01000080.1| 42938 42150 -2 - 789 POSSIBLE MEMBRANE PROTEIN - none -
fig|6666666.67508.peg.1073 CDS gi|356607489|emb|CAFW01000080.1| 43134 44933 3 + 1800 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67508.peg.1074 CDS gi|356607489|emb|CAFW01000080.1| 45109 46047 1 + 939 FIG00544678: hypothetical protein - none -
fig|6666666.67508.peg.1075 CDS gi|356607489|emb|CAFW01000080.1| 46691 46131 -2 - 561 FIG00546135: hypothetical protein - none -
fig|6666666.67508.peg.1076 CDS gi|356607489|emb|CAFW01000080.1| 46817 48070 2 + 1254 putative multidrug resistance protein - none -
fig|6666666.67508.peg.1077 CDS gi|356607489|emb|CAFW01000080.1| 48300 49661 3 + 1362 Predicted histidine uptake transporter - none -
fig|6666666.67508.peg.1078 CDS gi|356607489|emb|CAFW01000080.1| 50601 49651 -3 - 951 Formiminoglutamase (EC 3.5.3.8) Histidine Degradation
fig|6666666.67508.peg.1079 CDS gi|356607489|emb|CAFW01000080.1| 50600 51433 2 + 834 Transcriptional regulator, IclR family - none -
fig|6666666.67508.peg.1080 CDS gi|356607489|emb|CAFW01000080.1| 51439 52110 1 + 672 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.1081 CDS gi|356607489|emb|CAFW01000080.1| 52297 53850 1 + 1554 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.67508.peg.1082 CDS gi|356607489|emb|CAFW01000080.1| 54126 55805 3 + 1680 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.67508.peg.1083 CDS gi|356607489|emb|CAFW01000080.1| 55897 57099 1 + 1203 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.67508.peg.1084 CDS gi|356607489|emb|CAFW01000080.1| 57782 57096 -2 - 687 two-component system, response regulator - none -
fig|6666666.67508.peg.1085 CDS gi|356607489|emb|CAFW01000080.1| 59214 57793 -3 - 1422 putative sensor kinase - none -
fig|6666666.67508.peg.1086 CDS gi|356607489|emb|CAFW01000080.1| 59796 59260 -3 - 537 hypothetical protein - none -
fig|6666666.67508.peg.1087 CDS gi|356607489|emb|CAFW01000080.1| 60202 62229 1 + 2028 Cold-shock DEAD-box protein A ATP-dependent RNA helicases, bacterial
fig|6666666.67508.peg.1088 CDS gi|356607489|emb|CAFW01000080.1| 63177 62731 -3 - 447 FIG00544250: hypothetical protein - none -
fig|6666666.67508.peg.1089 CDS gi|356607489|emb|CAFW01000080.1| 63594 63274 -3 - 321 Mobile element protein - none -
fig|6666666.67508.peg.1090 CDS gi|356607545|emb|CAFW01000079.1| 1051 680 -1 - 372 hypothetical protein - none -
fig|6666666.67508.peg.1091 CDS gi|356607545|emb|CAFW01000079.1| 1940 1101 -2 - 840 FIG01124361: hypothetical protein - none -
fig|6666666.67508.peg.1092 CDS gi|356607545|emb|CAFW01000079.1| 2911 2084 -1 - 828 Heme ABC transporter, ATPase component HmuV Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.1093 CDS gi|356607545|emb|CAFW01000079.1| 3780 2914 -3 - 867 Heme ABC transporter, permease protein HmuU Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.1094 CDS gi|356607545|emb|CAFW01000079.1| 5030 3948 -2 - 1083 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.1095 CDS gi|356607545|emb|CAFW01000079.1| 7059 5095 -3 - 1965 FIG01124361: hypothetical protein - none -
fig|6666666.67508.peg.1096 CDS gi|356607545|emb|CAFW01000079.1| 7264 7929 1 + 666 putative membrane protein - none -
fig|6666666.67508.peg.1097 CDS gi|356607545|emb|CAFW01000079.1| 7968 8300 3 + 333 FIG00544339: hypothetical protein - none -
fig|6666666.67508.peg.1098 CDS gi|356607545|emb|CAFW01000079.1| 9288 8458 -3 - 831 FIG00544241: hypothetical protein - none -
fig|6666666.67508.peg.1099 CDS gi|356607545|emb|CAFW01000079.1| 9325 10371 1 + 1047 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67508.peg.1100 CDS gi|356607545|emb|CAFW01000079.1| 10590 11099 3 + 510 hypothetical protein - none -
fig|6666666.67508.peg.1101 CDS gi|356607545|emb|CAFW01000079.1| 12422 11118 -2 - 1305 FIG00544244: hypothetical protein - none -
fig|6666666.67508.peg.1102 CDS gi|356607545|emb|CAFW01000079.1| 13570 12446 -1 - 1125 Glycosyltransferase - none -
fig|6666666.67508.peg.1103 CDS gi|356607545|emb|CAFW01000079.1| 14814 13576 -3 - 1239 Sulfolipid (UDP-sulfoquinovose) biosynthesis protein - none -
fig|6666666.67508.peg.1104 CDS gi|356607545|emb|CAFW01000079.1| 15543 14938 -3 - 606 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1105 CDS gi|356607545|emb|CAFW01000079.1| 17982 15586 -3 - 2397 FIG00545740: hypothetical protein - none -
fig|6666666.67508.peg.1106 CDS gi|356607545|emb|CAFW01000079.1| 18202 18858 1 + 657 hypothetical membrane protein - none -
fig|6666666.67508.peg.1107 CDS gi|356607545|emb|CAFW01000079.1| 19447 18884 -1 - 564 carbonic anhydrase, family 3 - none -
fig|6666666.67508.peg.1108 CDS gi|356607545|emb|CAFW01000079.1| 19861 19493 -1 - 369 FIG00544384: hypothetical protein - none -
fig|6666666.67508.peg.1109 CDS gi|356607545|emb|CAFW01000079.1| 20277 19876 -3 - 402 hypothetical protein - none -
fig|6666666.67508.peg.1110 CDS gi|356607545|emb|CAFW01000079.1| 20470 21393 1 + 924 FIG00546451: hypothetical protein - none -
fig|6666666.67508.peg.1111 CDS gi|356607545|emb|CAFW01000079.1| 21945 21412 -3 - 534 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.67508.peg.1112 CDS gi|356607545|emb|CAFW01000079.1| 22171 21992 -1 - 180 hypothetical protein - none -
fig|6666666.67508.peg.1113 CDS gi|356607545|emb|CAFW01000079.1| 22550 22738 2 + 189 hypothetical protein - none -
fig|6666666.67508.peg.1114 CDS gi|356607545|emb|CAFW01000079.1| 24366 22735 -3 - 1632 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.67508.peg.1115 CDS gi|356607545|emb|CAFW01000079.1| 25197 24373 -3 - 825 putative oxidoreductase - none -
fig|6666666.67508.peg.1116 CDS gi|356607545|emb|CAFW01000079.1| 25933 25244 -1 - 690 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67508.peg.1117 CDS gi|356607545|emb|CAFW01000079.1| 27133 25970 -1 - 1164 hypothetical protein - none -
fig|6666666.67508.peg.1118 CDS gi|356607545|emb|CAFW01000079.1| 27251 28255 2 + 1005 FIG00547483: hypothetical protein - none -
fig|6666666.67508.peg.1119 CDS gi|356607545|emb|CAFW01000079.1| 28341 29792 3 + 1452 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.67508.peg.1120 CDS gi|356607545|emb|CAFW01000079.1| 29887 30348 1 + 462 hypothetical protein - none -
fig|6666666.67508.peg.1121 CDS gi|356607545|emb|CAFW01000079.1| 30329 31294 2 + 966 hypothetical protein - none -
fig|6666666.67508.peg.1122 CDS gi|356607545|emb|CAFW01000079.1| 32213 31317 -2 - 897 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.67508.peg.1123 CDS gi|356607545|emb|CAFW01000079.1| 32792 32250 -2 - 543 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.67508.peg.1124 CDS gi|356607545|emb|CAFW01000079.1| 33538 32891 -1 - 648 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.67508.peg.1125 CDS gi|356607545|emb|CAFW01000079.1| 35136 33814 -3 - 1323 hypothetical protein - none -
fig|6666666.67508.peg.1126 CDS gi|356607545|emb|CAFW01000079.1| 36162 35395 -3 - 768 FIG00545789: hypothetical protein - none -
fig|6666666.67508.peg.1127 CDS gi|356607545|emb|CAFW01000079.1| 37171 36197 -1 - 975 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) De Novo Purine Biosynthesis;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.67508.peg.1128 CDS gi|356607545|emb|CAFW01000079.1| 38765 37296 -2 - 1470 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67508.peg.1129 CDS gi|356607545|emb|CAFW01000079.1| 40159 38849 -1 - 1311 Putative membrane protein - none -
fig|6666666.67508.peg.1130 CDS gi|356607545|emb|CAFW01000079.1| 41452 40175 -1 - 1278 putative secreted protein - none -
fig|6666666.67508.peg.1131 CDS gi|356607545|emb|CAFW01000079.1| 41641 42504 1 + 864 FIG00544553: hypothetical protein - none -
fig|6666666.67508.peg.1132 CDS gi|356607545|emb|CAFW01000079.1| 42810 43472 3 + 663 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1133 CDS gi|356607545|emb|CAFW01000079.1| 43502 47173 2 + 3672 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.67508.peg.1134 CDS gi|356607545|emb|CAFW01000079.1| 47210 47842 2 + 633 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.67508.peg.1135 CDS gi|356607545|emb|CAFW01000079.1| 48322 47876 -1 - 447 FIG00546185: hypothetical protein - none -
fig|6666666.67508.peg.1136 CDS gi|356607545|emb|CAFW01000079.1| 48632 49396 2 + 765 FIG00545464: hypothetical protein - none -
fig|6666666.67508.peg.1137 CDS gi|356607545|emb|CAFW01000079.1| 49569 50846 3 + 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.67508.peg.1138 CDS gi|356607545|emb|CAFW01000079.1| 51082 51828 1 + 747 Putative membrane protein - none -
fig|6666666.67508.peg.1139 CDS gi|356607545|emb|CAFW01000079.1| 53638 51980 -1 - 1659 FIG00544744: hypothetical protein - none -
fig|6666666.67508.peg.1140 CDS gi|356607545|emb|CAFW01000079.1| 53849 54394 2 + 546 FIG004853: possible toxin to DivIC Possible new toxin-antitoxin system including DivIC
fig|6666666.67508.peg.1141 CDS gi|356607545|emb|CAFW01000079.1| 54413 55375 2 + 963 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.67508.peg.1142 CDS gi|356607545|emb|CAFW01000079.1| 56781 56557 -3 - 225 hypothetical protein - none -
fig|6666666.67508.peg.1143 CDS gi|356607545|emb|CAFW01000079.1| 57278 56970 -2 - 309 hypothetical protein - none -
fig|6666666.67508.peg.1144 CDS gi|356607545|emb|CAFW01000079.1| 58113 57937 -3 - 177 hypothetical protein - none -
fig|6666666.67508.peg.1145 CDS gi|356607545|emb|CAFW01000079.1| 59201 58269 -2 - 933 hypothetical protein - none -
fig|6666666.67508.peg.1146 CDS gi|356607545|emb|CAFW01000079.1| 59340 59194 -3 - 147 hypothetical protein - none -
fig|6666666.67508.peg.1147 CDS gi|356607545|emb|CAFW01000079.1| 61234 60050 -1 - 1185 TnpY - none -
fig|6666666.67508.peg.1148 CDS gi|356607545|emb|CAFW01000079.1| 61368 61234 -3 - 135 hypothetical protein - none -
fig|6666666.67508.peg.1149 CDS gi|356607545|emb|CAFW01000079.1| 61895 61707 -2 - 189 hypothetical protein - none -
fig|6666666.67508.peg.1150 CDS gi|356607545|emb|CAFW01000079.1| 62307 62017 -3 - 291 hypothetical protein - none -
fig|6666666.67508.peg.1151 CDS gi|356607545|emb|CAFW01000079.1| 62522 62307 -2 - 216 hypothetical protein - none -
fig|6666666.67508.peg.1152 CDS gi|356607545|emb|CAFW01000079.1| 63172 63291 1 + 120 hypothetical protein - none -
fig|6666666.67508.peg.1153 CDS gi|356607545|emb|CAFW01000079.1| 63317 64447 2 + 1131 Phage integrase - none -
fig|6666666.67508.peg.1154 CDS gi|356607545|emb|CAFW01000079.1| 65634 64708 -3 - 927 hypothetical protein - none -
fig|6666666.67508.peg.1155 CDS gi|356607545|emb|CAFW01000079.1| 67012 65618 -1 - 1395 Mobile element protein - none -
fig|6666666.67508.peg.1156 CDS gi|356607545|emb|CAFW01000079.1| 67080 67247 3 + 168 hypothetical protein - none -
fig|6666666.67508.peg.1157 CDS gi|356607545|emb|CAFW01000079.1| 67395 68183 3 + 789 FIG00543890: hypothetical protein - none -
fig|6666666.67508.peg.1158 CDS gi|356607545|emb|CAFW01000079.1| 69639 69163 -3 - 477 FIG00545488: hypothetical protein - none -
fig|6666666.67508.peg.1159 CDS gi|356607545|emb|CAFW01000079.1| 70208 69690 -2 - 519 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.67508.peg.1160 CDS gi|356607545|emb|CAFW01000079.1| 70826 70470 -2 - 357 FIG00544319: hypothetical protein - none -
fig|6666666.67508.peg.1161 CDS gi|356607545|emb|CAFW01000079.1| 71055 71993 3 + 939 Mycothiol S-conjugate amidase Mca Glutathione analogs: mycothiol
fig|6666666.67508.peg.1162 CDS gi|356607545|emb|CAFW01000079.1| 71993 72322 2 + 330 FIG00543949: hypothetical protein - none -
fig|6666666.67508.peg.1163 CDS gi|356607545|emb|CAFW01000079.1| 72664 73746 1 + 1083 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.1164 CDS gi|356607545|emb|CAFW01000079.1| 73940 74527 2 + 588 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67508.peg.1165 CDS gi|356607545|emb|CAFW01000079.1| 74539 75060 1 + 522 hypothetical protein - none -
fig|6666666.67508.peg.1166 CDS gi|356607545|emb|CAFW01000079.1| 76007 75072 -2 - 936 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.67508.peg.1167 CDS gi|356607545|emb|CAFW01000079.1| 76166 77467 2 + 1302 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.67508.peg.1168 CDS gi|356607545|emb|CAFW01000079.1| 78093 77575 -3 - 519 FIG00546727: hypothetical protein - none -
fig|6666666.67508.peg.1169 CDS gi|356607545|emb|CAFW01000079.1| 78189 78908 3 + 720 putative LysR-family transcriptional regulator - none -
fig|6666666.67508.peg.1170 CDS gi|356607545|emb|CAFW01000079.1| 79089 80492 3 + 1404 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.67508.peg.1171 CDS gi|356607545|emb|CAFW01000079.1| 80574 81170 3 + 597 sortase or related acyltransferase - none -
fig|6666666.67508.peg.1172 CDS gi|356607545|emb|CAFW01000079.1| 82950 81301 -3 - 1650 permease of the major facilitator superfamily - none -
fig|6666666.67508.peg.1173 CDS gi|356607545|emb|CAFW01000079.1| 83603 82944 -2 - 660 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1174 CDS gi|356607545|emb|CAFW01000079.1| 84316 83693 -1 - 624 hypothetical protein - none -
fig|6666666.67508.peg.1175 CDS gi|356607545|emb|CAFW01000079.1| 84529 84687 1 + 159 hypothetical protein - none -
fig|6666666.67508.peg.1176 CDS gi|356607545|emb|CAFW01000079.1| 86244 84844 -3 - 1401 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.67508.peg.1177 CDS gi|356607545|emb|CAFW01000079.1| 87426 86410 -3 - 1017 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.67508.peg.1178 CDS gi|356607545|emb|CAFW01000079.1| 87508 87693 1 + 186 hypothetical protein - none -
fig|6666666.67508.peg.1179 CDS gi|356607545|emb|CAFW01000079.1| 87699 88274 3 + 576 FIG00545451: hypothetical protein - none -
fig|6666666.67508.peg.1180 CDS gi|356607545|emb|CAFW01000079.1| 88744 88361 -1 - 384 FIG00545533: hypothetical protein - none -
fig|6666666.67508.peg.1181 CDS gi|356607545|emb|CAFW01000079.1| 89068 88772 -1 - 297 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67508.peg.1182 CDS gi|356607545|emb|CAFW01000079.1| 90354 89113 -3 - 1242 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.67508.peg.1183 CDS gi|356607545|emb|CAFW01000079.1| 90440 91393 2 + 954 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67508.peg.1184 CDS gi|356607545|emb|CAFW01000079.1| 92647 91490 -1 - 1158 hypothetical protein - none -
fig|6666666.67508.peg.1185 CDS gi|356607545|emb|CAFW01000079.1| 93924 92683 -3 - 1242 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.67508.peg.1186 CDS gi|356607545|emb|CAFW01000079.1| 95545 93959 -1 - 1587 FIG00546199: hypothetical protein - none -
fig|6666666.67508.peg.1187 CDS gi|356607545|emb|CAFW01000079.1| 95634 96737 3 + 1104 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.67508.peg.1188 CDS gi|356607545|emb|CAFW01000079.1| 96777 96995 3 + 219 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.67508.peg.1189 CDS gi|356607545|emb|CAFW01000079.1| 97045 97935 1 + 891 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.67508.peg.1190 CDS gi|356607545|emb|CAFW01000079.1| 98344 100059 1 + 1716 D-Lactate dehydrogenase (EC 1.1.2.5) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.67508.peg.1191 CDS gi|356607545|emb|CAFW01000079.1| 101067 100450 -3 - 618 Mobile element protein - none -
fig|6666666.67508.peg.1192 CDS gi|356607545|emb|CAFW01000079.1| 101656 101087 -1 - 570 Mobile element protein - none -
fig|6666666.67508.peg.1193 CDS gi|356607545|emb|CAFW01000079.1| 102903 101755 -3 - 1149 Mobile element protein - none -
fig|6666666.67508.peg.1194 CDS gi|356607545|emb|CAFW01000079.1| 102919 103185 1 + 267 hypothetical protein - none -
fig|6666666.67508.peg.1195 CDS gi|356607545|emb|CAFW01000079.1| 104813 103647 -2 - 1167 hypothetical protein - none -
fig|6666666.67508.peg.1196 CDS gi|356607545|emb|CAFW01000079.1| 104784 105152 3 + 369 integrase, putative - none -
fig|6666666.67508.peg.1197 CDS gi|356607545|emb|CAFW01000079.1| 105395 105574 2 + 180 hypothetical protein - none -
fig|6666666.67508.peg.1198 CDS gi|356607545|emb|CAFW01000079.1| 107061 105571 -3 - 1491 Mobile element protein - none -
fig|6666666.67508.peg.1199 CDS gi|356607545|emb|CAFW01000079.1| 107111 107614 2 + 504 probable siderophore interacting protein - none -
fig|6666666.67508.peg.1200 CDS gi|356607545|emb|CAFW01000079.1| 107694 108077 3 + 384 Putative cytoplasmic protein - none -
fig|6666666.67508.peg.1201 CDS gi|356607545|emb|CAFW01000079.1| 108391 108098 -1 - 294 Glyoxalase/Bleomycin resistance protein/dioxygenase domain - none -
fig|6666666.67508.peg.1202 CDS gi|356607545|emb|CAFW01000079.1| 108371 108550 2 + 180 hypothetical protein - none -
fig|6666666.67508.peg.1203 CDS gi|356607545|emb|CAFW01000079.1| 108614 109450 2 + 837 L-Aspartate dehydrogenase (EC 1.4.1.21) NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.1204 CDS gi|356607545|emb|CAFW01000079.1| 109456 109980 1 + 525 FIG00544295: hypothetical protein - none -
fig|6666666.67508.peg.1205 CDS gi|356607545|emb|CAFW01000079.1| 110334 109996 -3 - 339 Lactoylglutathione lyase and related lyases - none -
fig|6666666.67508.peg.1206 CDS gi|356607545|emb|CAFW01000079.1| 110425 112188 1 + 1764 Sulfate transporter - none -
fig|6666666.67508.peg.1207 CDS gi|356607545|emb|CAFW01000079.1| 112306 112977 1 + 672 hypothetical protein - none -
fig|6666666.67508.peg.1208 CDS gi|356607545|emb|CAFW01000079.1| 112981 113394 1 + 414 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.1209 CDS gi|356607545|emb|CAFW01000079.1| 113418 113657 3 + 240 CDS_ID OB2856 - none -
fig|6666666.67508.peg.1210 CDS gi|356607545|emb|CAFW01000079.1| 113735 114505 2 + 771 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway
fig|6666666.67508.peg.1211 CDS gi|356607545|emb|CAFW01000079.1| 114768 115094 3 + 327 Transcriptional regulator, ArsR family - none -
fig|6666666.67508.peg.1212 CDS gi|356607545|emb|CAFW01000079.1| 115094 115783 2 + 690 putative integral membrane protein - none -
fig|6666666.67508.peg.1213 CDS gi|356607545|emb|CAFW01000079.1| 115944 115780 -3 - 165 2-pyrone-4,6-dicarboxylic acid hydrolase, putative - none -
fig|6666666.67508.peg.1214 CDS gi|356607545|emb|CAFW01000079.1| 116980 115982 -1 - 999 Periplasmic binding protein - none -
fig|6666666.67508.peg.1215 CDS gi|356607545|emb|CAFW01000079.1| 118100 117084 -2 - 1017 hypothetical protein - none -
fig|6666666.67508.peg.1216 CDS gi|356607545|emb|CAFW01000079.1| 120406 118136 -1 - 2271 hypothetical protein - none -
fig|6666666.67508.peg.1217 CDS gi|356607545|emb|CAFW01000079.1| 120980 120717 -2 - 264 Arsenical resistance operon repressor Arsenic resistance
fig|6666666.67508.peg.1218 CDS gi|356607545|emb|CAFW01000079.1| 121314 122276 3 + 963 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67508.peg.1219 CDS gi|356607545|emb|CAFW01000079.1| 122330 122689 2 + 360 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.67508.peg.1220 CDS gi|356607545|emb|CAFW01000079.1| 123194 123009 -2 - 186 hypothetical protein - none -
fig|6666666.67508.peg.1221 CDS gi|356607545|emb|CAFW01000079.1| 123279 123581 3 + 303 Fosmidomycin resistance protein - none -
fig|6666666.67508.peg.1222 CDS gi|356607545|emb|CAFW01000079.1| 123578 123757 2 + 180 hypothetical protein - none -
fig|6666666.67508.peg.1223 CDS gi|356607545|emb|CAFW01000079.1| 123791 124351 2 + 561 Fosmidomycin resistance protein - none -
fig|6666666.67508.peg.1224 CDS gi|356607545|emb|CAFW01000079.1| 125871 124348 -3 - 1524 Sulfate permease Cysteine Biosynthesis
fig|6666666.67508.peg.1225 CDS gi|356607545|emb|CAFW01000079.1| 126532 126086 -1 - 447 hypothetical protein - none -
fig|6666666.67508.peg.1226 CDS gi|356607545|emb|CAFW01000079.1| 126675 127328 3 + 654 transcriptional regulator - none -
fig|6666666.67508.peg.1227 CDS gi|356607545|emb|CAFW01000079.1| 127965 127558 -3 - 408 Glyoxalase family protein - none -
fig|6666666.67508.peg.1228 CDS gi|356607545|emb|CAFW01000079.1| 130059 128101 -3 - 1959 FIG019045: long form Mg-chelase associated protein with vWA domain CBSS-336982.3.peg.1011
fig|6666666.67508.peg.1229 CDS gi|356607545|emb|CAFW01000079.1| 131463 130075 -3 - 1389 Magnesium chelatase, subunit ChlI (EC 6.6.1.1) CBSS-336982.3.peg.1011
fig|6666666.67508.peg.1230 CDS gi|356607545|emb|CAFW01000079.1| 131531 132175 2 + 645 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.67508.peg.1231 CDS gi|356607545|emb|CAFW01000079.1| 132175 132879 1 + 705 FIG00549881: hypothetical protein - none -
fig|6666666.67508.peg.1232 CDS gi|356607545|emb|CAFW01000079.1| 132969 133733 3 + 765 FIG00547971: hypothetical protein - none -
fig|6666666.67508.peg.1233 CDS gi|356607545|emb|CAFW01000079.1| 133789 134277 1 + 489 hypothetical protein - none -
fig|6666666.67508.peg.1234 CDS gi|356607545|emb|CAFW01000079.1| 134581 136158 1 + 1578 amino acid carrier protein - none -
fig|6666666.67508.peg.1235 CDS gi|356607545|emb|CAFW01000079.1| 136207 136899 1 + 693 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.1236 CDS gi|356607545|emb|CAFW01000079.1| 137078 136947 -2 - 132 hypothetical protein - none -
fig|6666666.67508.peg.1237 CDS gi|356607545|emb|CAFW01000079.1| 137227 138081 1 + 855 hypothetical protein - none -
fig|6666666.67508.peg.1238 CDS gi|356607545|emb|CAFW01000079.1| 138115 138651 1 + 537 amine oxidase - none -
fig|6666666.67508.peg.1239 CDS gi|356607545|emb|CAFW01000079.1| 138679 139578 1 + 900 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67508.peg.1240 CDS gi|356607545|emb|CAFW01000079.1| 140078 139686 -2 - 393 FIG00544985: hypothetical protein - none -
fig|6666666.67508.peg.1241 CDS gi|356607545|emb|CAFW01000079.1| 140242 140523 1 + 282 Alkylphosphonate utilization operon protein PhnA Alkylphosphonate utilization
fig|6666666.67508.peg.1242 CDS gi|356607545|emb|CAFW01000079.1| 141073 140546 -1 - 528 FIG00547585: hypothetical protein - none -
fig|6666666.67508.peg.1243 CDS gi|356607545|emb|CAFW01000079.1| 141216 142457 3 + 1242 permease of the major facilitator superfamily - none -
fig|6666666.67508.peg.1244 CDS gi|356607545|emb|CAFW01000079.1| 142807 142938 1 + 132 hypothetical protein - none -
fig|6666666.67508.peg.1245 CDS gi|356607545|emb|CAFW01000079.1| 142935 143630 3 + 696 lincomycin resistance protein LmrB - none -
fig|6666666.67508.peg.1246 CDS gi|356607545|emb|CAFW01000079.1| 143627 144727 2 + 1101 lincomycin resistance protein LmrB - none -
fig|6666666.67508.peg.1247 CDS gi|356607545|emb|CAFW01000079.1| 145667 144699 -2 - 969 Arsenical-resistance protein ACR3 Arsenic resistance
fig|6666666.67508.peg.1248 CDS gi|356607545|emb|CAFW01000079.1| 146299 146664 1 + 366 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.67508.peg.1249 CDS gi|356607545|emb|CAFW01000079.1| 148138 146789 -1 - 1350 Putative secreted protein - none -
fig|6666666.67508.peg.1250 CDS gi|356607545|emb|CAFW01000079.1| 148236 148880 3 + 645 Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) Omega peptidases (EC 3.4.19.-)
fig|6666666.67508.peg.1251 CDS gi|356607545|emb|CAFW01000079.1| 149543 148884 -2 - 660 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.67508.peg.1252 CDS gi|356607545|emb|CAFW01000079.1| 149796 150533 3 + 738 FIG00547871: hypothetical protein - none -
fig|6666666.67508.peg.1253 CDS gi|356607545|emb|CAFW01000079.1| 152373 151003 -3 - 1371 Proton/glutamate symport protein @ Sodium/glutamate symport protein Glutamate and Aspartate uptake in Bacteria
fig|6666666.67508.peg.1254 CDS gi|356607545|emb|CAFW01000079.1| 152574 153269 3 + 696 hypothetical protein - none -
fig|6666666.67508.peg.1255 CDS gi|356607545|emb|CAFW01000079.1| 153368 156805 2 + 3438 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase
fig|6666666.67508.peg.1256 CDS gi|356607545|emb|CAFW01000079.1| 153401 153934 2 + 534 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.67508.peg.1257 CDS gi|356607545|emb|CAFW01000079.1| 153956 156805 2 + 2850 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.67508.peg.1258 CDS gi|356607545|emb|CAFW01000079.1| 156805 157890 1 + 1086 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate hydrogenase
fig|6666666.67508.peg.1259 CDS gi|356607545|emb|CAFW01000079.1| 157891 159000 1 + 1110 Formate dehydrogenase O putative subunit Formate hydrogenase
fig|6666666.67508.peg.1260 CDS gi|356607545|emb|CAFW01000079.1| 160260 159259 -3 - 1002 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism
fig|6666666.67508.peg.1261 CDS gi|356607702|emb|CAFW01000078.1| 3521 2178 -2 - 1344 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) - none -
fig|6666666.67508.peg.1262 CDS gi|356607702|emb|CAFW01000078.1| 4923 3583 -3 - 1341 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.67508.peg.1263 CDS gi|356607702|emb|CAFW01000078.1| 5297 6934 2 + 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.67508.peg.1264 CDS gi|356607702|emb|CAFW01000078.1| 7760 7963 2 + 204 hypothetical protein - none -
fig|6666666.67508.peg.1265 CDS gi|356607702|emb|CAFW01000078.1| 8055 8180 3 + 126 hypothetical protein - none -
fig|6666666.67508.peg.1266 CDS gi|356607702|emb|CAFW01000078.1| 8314 9213 1 + 900 Polyphosphate kinase 2 (EC 2.7.4.1) Polyphosphate
fig|6666666.67508.peg.1267 CDS gi|356607702|emb|CAFW01000078.1| 10139 9297 -2 - 843 hypothetical protein - none -
fig|6666666.67508.peg.1268 CDS gi|356607702|emb|CAFW01000078.1| 10256 10378 2 + 123 hypothetical protein - none -
fig|6666666.67508.peg.1269 CDS gi|356607702|emb|CAFW01000078.1| 10442 10639 2 + 198 hypothetical protein - none -
fig|6666666.67508.peg.1270 CDS gi|356607702|emb|CAFW01000078.1| 10727 11011 2 + 285 hypothetical protein - none -
fig|6666666.67508.peg.1271 CDS gi|356607702|emb|CAFW01000078.1| 11023 11244 1 + 222 hypothetical protein - none -
fig|6666666.67508.peg.1272 CDS gi|356607702|emb|CAFW01000078.1| 12331 11573 -1 - 759 3-hydroxyacyl-CoA dehydrogenase - none -
fig|6666666.67508.peg.1273 CDS gi|356607702|emb|CAFW01000078.1| 16437 12580 -3 - 3858 putative non-ribosomal peptide synthetase - none -
fig|6666666.67508.peg.1274 CDS gi|356607702|emb|CAFW01000078.1| 16903 16439 -1 - 465 Transcriptional regulator, MarR family - none -
fig|6666666.67508.peg.1275 CDS gi|356607702|emb|CAFW01000078.1| 17381 17073 -2 - 309 rhodanese-related sulfurtransferase - none -
fig|6666666.67508.peg.1276 CDS gi|356607702|emb|CAFW01000078.1| 18070 17594 -1 - 477 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.67508.peg.1277 CDS gi|356607702|emb|CAFW01000078.1| 18227 19513 2 + 1287 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.1278 CDS gi|356607702|emb|CAFW01000078.1| 19530 20633 3 + 1104 tRNA(Ile)-lysidine synthetase - none -
fig|6666666.67508.peg.1279 CDS gi|356607702|emb|CAFW01000078.1| 20676 21284 3 + 609 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.67508.peg.1280 CDS gi|356607702|emb|CAFW01000078.1| 21298 23865 1 + 2568 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67508.peg.1281 CDS gi|356607702|emb|CAFW01000078.1| 23945 24538 2 + 594 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.1282 CDS gi|356607702|emb|CAFW01000078.1| 24565 25440 1 + 876 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67508.peg.1283 CDS gi|356607702|emb|CAFW01000078.1| 25441 25818 1 + 378 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67508.peg.1284 CDS gi|356607702|emb|CAFW01000078.1| 25822 26307 1 + 486 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.67508.peg.1285 CDS gi|356607702|emb|CAFW01000078.1| 26304 26780 3 + 477 FIG027937: secreted protein Folate biosynthesis cluster
fig|6666666.67508.peg.1286 CDS gi|356607702|emb|CAFW01000078.1| 26786 28099 2 + 1314 FIG00544686: hypothetical protein - none -
fig|6666666.67508.peg.1287 CDS gi|356607702|emb|CAFW01000078.1| 28105 28791 1 + 687 FIG173306: hypothetical protein - none -
fig|6666666.67508.peg.1288 CDS gi|356607702|emb|CAFW01000078.1| 28788 29648 3 + 861 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67508.peg.1289 CDS gi|356607702|emb|CAFW01000078.1| 30600 29662 -3 - 939 Arsenical pump-driving ATPase (EC 3.6.3.16) Arsenic resistance;
Stress related cluster
fig|6666666.67508.peg.1290 CDS gi|356607702|emb|CAFW01000078.1| 30884 30621 -2 - 264 FIG00545541: hypothetical protein - none -
fig|6666666.67508.peg.1291 CDS gi|356607702|emb|CAFW01000078.1| 32603 30888 -2 - 1716 Carbon starvation protein A Carbon Starvation;
Stress related cluster
fig|6666666.67508.peg.1292 CDS gi|356607702|emb|CAFW01000078.1| 32837 32974 2 + 138 hypothetical protein - none -
fig|6666666.67508.peg.1293 CDS gi|356607702|emb|CAFW01000078.1| 33276 33121 -3 - 156 hypothetical protein - none -
fig|6666666.67508.peg.1294 CDS gi|356607702|emb|CAFW01000078.1| 33338 33901 2 + 564 hypothetical protein - none -
fig|6666666.67508.peg.1295 CDS gi|356607702|emb|CAFW01000078.1| 36458 34347 -2 - 2112 Putative phosphatase - none -
fig|6666666.67508.peg.1296 CDS gi|356607702|emb|CAFW01000078.1| 36661 38250 1 + 1590 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.67508.peg.1297 CDS gi|356607702|emb|CAFW01000078.1| 38313 38864 3 + 552 putative reductase - none -
fig|6666666.67508.peg.1298 CDS gi|356607702|emb|CAFW01000078.1| 39663 39112 -3 - 552 hypothetical protein - none -
fig|6666666.67508.peg.1299 CDS gi|356607702|emb|CAFW01000078.1| 40057 40974 1 + 918 Phytoene synthase (EC 2.5.1.32) Protein deglycation
fig|6666666.67508.peg.1300 CDS gi|356607702|emb|CAFW01000078.1| 40979 42700 2 + 1722 Phytoene dehydrogenase (EC 1.14.99.-) Protein deglycation
fig|6666666.67508.peg.1301 CDS gi|356607702|emb|CAFW01000078.1| 42941 44440 2 + 1500 putative transport protein - none -
fig|6666666.67508.peg.1302 CDS gi|356607702|emb|CAFW01000078.1| 44710 47427 1 + 2718 ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Proteolysis in bacteria, ATP-dependent
fig|6666666.67508.peg.1303 CDS gi|356607702|emb|CAFW01000078.1| 47835 48005 3 + 171 FIG00543978: hypothetical protein - none -
fig|6666666.67508.peg.1304 CDS gi|356607702|emb|CAFW01000078.1| 48933 48064 -3 - 870 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.67508.peg.1305 CDS gi|356607702|emb|CAFW01000078.1| 48990 49595 3 + 606 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.67508.peg.1306 CDS gi|356607702|emb|CAFW01000078.1| 49725 50480 3 + 756 FIG00544149: hypothetical protein - none -
fig|6666666.67508.peg.1307 CDS gi|356607702|emb|CAFW01000078.1| 51812 50532 -2 - 1281 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67508.peg.1308 CDS gi|356607702|emb|CAFW01000078.1| 52219 52073 -1 - 147 hypothetical protein - none -
fig|6666666.67508.peg.1309 CDS gi|356607702|emb|CAFW01000078.1| 53184 52615 -3 - 570 FIG00544037: hypothetical protein - none -
fig|6666666.67508.peg.1310 CDS gi|356607702|emb|CAFW01000078.1| 53611 54198 1 + 588 CarD-like transcriptional regulator - none -
fig|6666666.67508.peg.1311 CDS gi|356607702|emb|CAFW01000078.1| 54202 54897 1 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67508.peg.1312 CDS gi|356607702|emb|CAFW01000078.1| 54921 55415 3 + 495 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.67508.peg.1313 CDS gi|356607702|emb|CAFW01000078.1| 55528 55412 -1 - 117 hypothetical protein - none -
fig|6666666.67508.peg.1314 CDS gi|356607702|emb|CAFW01000078.1| 55863 58028 3 + 2166 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.67508.peg.1315 CDS gi|356607702|emb|CAFW01000078.1| 58236 59000 3 + 765 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67508.peg.1316 CDS gi|356607702|emb|CAFW01000078.1| 59070 60458 3 + 1389 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.67508.peg.1317 CDS gi|356607702|emb|CAFW01000078.1| 60484 61440 1 + 957 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.67508.peg.1318 CDS gi|356607702|emb|CAFW01000078.1| 61582 62100 1 + 519 hypothetical protein - none -
fig|6666666.67508.peg.1319 CDS gi|356607702|emb|CAFW01000078.1| 63265 62444 -1 - 822 Bll1128 protein - none -
fig|6666666.67508.peg.1320 CDS gi|356607702|emb|CAFW01000078.1| 64245 63277 -3 - 969 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.67508.peg.1321 CDS gi|356607702|emb|CAFW01000078.1| 64946 64245 -2 - 702 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.67508.peg.1322 CDS gi|356607702|emb|CAFW01000078.1| 66045 65029 -3 - 1017 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.67508.peg.1323 CDS gi|356607702|emb|CAFW01000078.1| 66193 67311 1 + 1119 Transcriptional regulator, LacI family - none -
fig|6666666.67508.peg.1324 CDS gi|356607702|emb|CAFW01000078.1| 69236 68442 -2 - 795 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis
fig|6666666.67508.peg.1325 CDS gi|356607702|emb|CAFW01000078.1| 69905 69330 -2 - 576 FIG00544334: hypothetical protein - none -
fig|6666666.67508.peg.1326 CDS gi|356607702|emb|CAFW01000078.1| 71398 69905 -1 - 1494 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) Trehalose Biosynthesis
fig|6666666.67508.peg.1327 CDS gi|356607702|emb|CAFW01000078.1| 71797 71444 -1 - 354 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67508.peg.1328 CDS gi|356607702|emb|CAFW01000078.1| 73811 71877 -2 - 1935 Putative amino acid export carrier protein - none -
fig|6666666.67508.peg.1329 CDS gi|356607702|emb|CAFW01000078.1| 74287 74802 1 + 516 hypothetical protein - none -
fig|6666666.67508.peg.1330 CDS gi|356607702|emb|CAFW01000078.1| 75074 74859 -2 - 216 hypothetical protein - none -
fig|6666666.67508.peg.1331 CDS gi|356607702|emb|CAFW01000078.1| 75684 75082 -3 - 603 hypothetical protein - none -
fig|6666666.67508.peg.1332 CDS gi|356607702|emb|CAFW01000078.1| 76250 75717 -2 - 534 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1333 CDS gi|356607702|emb|CAFW01000078.1| 77751 76237 -3 - 1515 FIG00544776: hypothetical protein - none -
fig|6666666.67508.peg.1334 CDS gi|356607702|emb|CAFW01000078.1| 77939 79690 2 + 1752 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.1335 CDS gi|356607702|emb|CAFW01000078.1| 81087 79747 -3 - 1341 Permease - none -
fig|6666666.67508.peg.1336 CDS gi|356607702|emb|CAFW01000078.1| 81200 81991 2 + 792 FIG00545455: hypothetical protein - none -
fig|6666666.67508.peg.1337 CDS gi|356607702|emb|CAFW01000078.1| 82099 82809 1 + 711 two-component system, response regulator - none -
fig|6666666.67508.peg.1338 CDS gi|356607702|emb|CAFW01000078.1| 82901 84577 2 + 1677 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.67508.peg.1339 CDS gi|356607702|emb|CAFW01000078.1| 85092 84652 -3 - 441 HIT family protein - none -
fig|6666666.67508.peg.1340 CDS gi|356607702|emb|CAFW01000078.1| 85474 86781 1 + 1308 Lanthionine biosynthesis cyclase LanC Lanthionine Synthetases
fig|6666666.67508.peg.1341 CDS gi|356607702|emb|CAFW01000078.1| 86783 88393 2 + 1611 Lanthionine biosynthesis protein LanB Lanthionine Synthetases
fig|6666666.67508.peg.1342 CDS gi|356607702|emb|CAFW01000078.1| 88813 88418 -1 - 396 Mobile element protein - none -
fig|6666666.67508.peg.1343 CDS gi|356607783|emb|CAFW01000077.1| 2842 4410 1 + 1569 Fimbrial subunit type 2 precursor - none -
fig|6666666.67508.peg.1344 CDS gi|356607783|emb|CAFW01000077.1| 4543 5430 1 + 888 Sortase A, LPXTG specific Heme, hemin uptake and utilization systems in GramPositives;
Sortase
fig|6666666.67508.peg.1345 CDS gi|356607783|emb|CAFW01000077.1| 5504 6295 2 + 792 potential surface-anchored protein - none -
fig|6666666.67508.peg.1346 CDS gi|356607783|emb|CAFW01000077.1| 6373 9090 1 + 2718 Putative surface-anchored fimbrial subunit - none -
fig|6666666.67508.peg.1347 CDS gi|356607783|emb|CAFW01000077.1| 9446 11320 2 + 1875 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67508.peg.1348 CDS gi|356607783|emb|CAFW01000077.1| 11320 12015 1 + 696 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67508.peg.1349 CDS gi|356607783|emb|CAFW01000077.1| 12137 13315 2 + 1179 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67508.peg.1350 CDS gi|356607783|emb|CAFW01000077.1| 13327 13728 1 + 402 HspR, transcriptional repressor of DnaK operon Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67508.peg.1351 CDS gi|356607783|emb|CAFW01000077.1| 14748 14957 3 + 210 hypothetical protein - none -
fig|6666666.67508.peg.1352 CDS gi|356607783|emb|CAFW01000077.1| 15133 16653 1 + 1521 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.1353 CDS gi|356607783|emb|CAFW01000077.1| 17767 16661 -1 - 1107 FIG00544569: hypothetical protein - none -
fig|6666666.67508.peg.1354 CDS gi|356607783|emb|CAFW01000077.1| 17919 17785 -3 - 135 hypothetical protein - none -
fig|6666666.67508.peg.1355 CDS gi|356607783|emb|CAFW01000077.1| 20152 18926 -1 - 1227 flavohemoprotein - none -
fig|6666666.67508.peg.1356 CDS gi|356607783|emb|CAFW01000077.1| 21256 20192 -1 - 1065 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - none -
fig|6666666.67508.peg.1357 CDS gi|356607783|emb|CAFW01000077.1| 21511 22161 1 + 651 hypothetical protein - none -
fig|6666666.67508.peg.1358 CDS gi|356607783|emb|CAFW01000077.1| 22649 22200 -2 - 450 Transcriptional regulator, AsnC family - none -
fig|6666666.67508.peg.1359 CDS gi|356607783|emb|CAFW01000077.1| 22743 23042 3 + 300 hypothetical protein - none -
fig|6666666.67508.peg.1360 CDS gi|356607783|emb|CAFW01000077.1| 23265 24644 3 + 1380 FIG00545970: hypothetical protein - none -
fig|6666666.67508.peg.1361 CDS gi|356607783|emb|CAFW01000077.1| 24837 25682 3 + 846 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.1362 CDS gi|356607783|emb|CAFW01000077.1| 25692 26714 3 + 1023 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.1363 CDS gi|356607783|emb|CAFW01000077.1| 26714 27388 2 + 675 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.1364 CDS gi|356607783|emb|CAFW01000077.1| 27584 30139 2 + 2556 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.67508.peg.1365 CDS gi|356607783|emb|CAFW01000077.1| 30759 30136 -3 - 624 putative two-component system response regulator - none -
fig|6666666.67508.peg.1366 CDS gi|356607783|emb|CAFW01000077.1| 31372 30776 -1 - 597 sensor histidine kinase - none -
fig|6666666.67508.peg.1367 CDS gi|356607783|emb|CAFW01000077.1| 31918 31382 -1 - 537 hypothetical protein - none -
fig|6666666.67508.peg.1368 CDS gi|356607783|emb|CAFW01000077.1| 32760 31978 -3 - 783 integral membrane protein - none -
fig|6666666.67508.peg.1369 CDS gi|356607783|emb|CAFW01000077.1| 33775 32771 -1 - 1005 putative ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.1370 CDS gi|356607783|emb|CAFW01000077.1| 33822 34676 3 + 855 Rhodanese-related sulfurtransferase - none -
fig|6666666.67508.peg.1371 CDS gi|356607783|emb|CAFW01000077.1| 34707 35879 3 + 1173 FIG00544840: hypothetical protein - none -
fig|6666666.67508.peg.1372 CDS gi|356607783|emb|CAFW01000077.1| 35920 36462 1 + 543 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.67508.peg.1373 CDS gi|356607783|emb|CAFW01000077.1| 36463 37101 1 + 639 probable RNA methyltransferase - none -
fig|6666666.67508.peg.1374 CDS gi|356607783|emb|CAFW01000077.1| 37147 38340 1 + 1194 fructose-bisphosphate aldolase family protein - none -
fig|6666666.67508.peg.1375 CDS gi|356607783|emb|CAFW01000077.1| 38392 39462 1 + 1071 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.67508.peg.1376 CDS gi|356607783|emb|CAFW01000077.1| 39510 40694 3 + 1185 FIG00545517: hypothetical protein - none -
fig|6666666.67508.peg.1377 CDS gi|356607783|emb|CAFW01000077.1| 41600 40704 -2 - 897 FIG00545467: hypothetical protein - none -
fig|6666666.67508.peg.1378 CDS gi|356607783|emb|CAFW01000077.1| 41677 42969 1 + 1293 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.67508.peg.1379 CDS gi|356607783|emb|CAFW01000077.1| 42979 44385 1 + 1407 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.67508.peg.1380 CDS gi|356607783|emb|CAFW01000077.1| 45183 44359 -3 - 825 hypothetical protein - none -
fig|6666666.67508.peg.1381 CDS gi|356607783|emb|CAFW01000077.1| 45486 45214 -3 - 273 hypothetical protein - none -
fig|6666666.67508.peg.1382 CDS gi|356607783|emb|CAFW01000077.1| 47053 45665 -1 - 1389 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2) Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1383 CDS gi|356607783|emb|CAFW01000077.1| 47306 48679 2 + 1374 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.1384 CDS gi|356607783|emb|CAFW01000077.1| 48679 49878 1 + 1200 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.1385 CDS gi|356607783|emb|CAFW01000077.1| 52553 49938 -2 - 2616 serine/threonine protein kinase - none -
fig|6666666.67508.peg.1386 CDS gi|356607783|emb|CAFW01000077.1| 53635 52550 -1 - 1086 @2Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)@2 - none -
fig|6666666.67508.peg.1387 CDS gi|356607783|emb|CAFW01000077.1| 55101 53635 -3 - 1467 FIG00543876: hypothetical protein - none -
fig|6666666.67508.peg.1388 CDS gi|356607783|emb|CAFW01000077.1| 55286 55735 2 + 450 mutT3 - none -
fig|6666666.67508.peg.1389 CDS gi|356607783|emb|CAFW01000077.1| 55793 56737 2 + 945 putative ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.1390 CDS gi|356607783|emb|CAFW01000077.1| 56727 57491 3 + 765 Putative ABC transport system membrane protein - none -
fig|6666666.67508.peg.1391 CDS gi|356607783|emb|CAFW01000077.1| 57492 58661 3 + 1170 permeases of the major facilitator superfamily - none -
fig|6666666.67508.peg.1392 CDS gi|356607783|emb|CAFW01000077.1| 60273 58771 -3 - 1503 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.1393 CDS gi|356607783|emb|CAFW01000077.1| 61092 60283 -3 - 810 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67508.peg.1394 CDS gi|356607783|emb|CAFW01000077.1| 62064 61096 -3 - 969 histone acetyltransferase HPA2-like protein - none -
fig|6666666.67508.peg.1395 CDS gi|356607783|emb|CAFW01000077.1| 62672 62079 -2 - 594 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67508.peg.1396 CDS gi|356607783|emb|CAFW01000077.1| 62671 62976 1 + 306 FIG00544061: hypothetical protein - none -
fig|6666666.67508.peg.1397 CDS gi|356607783|emb|CAFW01000077.1| 62933 63712 2 + 780 FIG00544658: hypothetical protein - none -
fig|6666666.67508.peg.1398 CDS gi|356607783|emb|CAFW01000077.1| 63766 64917 1 + 1152 Putative cytoplasmic protein - none -
fig|6666666.67508.peg.1399 CDS gi|356607783|emb|CAFW01000077.1| 66154 64949 -1 - 1206 FIG00545225: hypothetical protein - none -
fig|6666666.67508.peg.1400 CDS gi|356607783|emb|CAFW01000077.1| 66611 66231 -2 - 381 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67508.peg.1401 CDS gi|356607783|emb|CAFW01000077.1| 66883 66611 -1 - 273 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67508.peg.1402 CDS gi|356607783|emb|CAFW01000077.1| 67407 66883 -3 - 525 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67508.peg.1403 CDS gi|356607783|emb|CAFW01000077.1| 69185 67404 -2 - 1782 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67508.peg.1404 CDS gi|356607783|emb|CAFW01000077.1| 69669 69178 -3 - 492 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67508.peg.1405 CDS gi|356607783|emb|CAFW01000077.1| 71421 69670 -3 - 1752 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67508.peg.1406 CDS gi|356607845|emb|CAFW01000076.1| 1398 661 -3 - 738 Putative conserved integral membrane protein - none -
fig|6666666.67508.peg.1407 CDS gi|356607845|emb|CAFW01000076.1| 2594 1413 -2 - 1182 putative amidase - none -
fig|6666666.67508.peg.1408 CDS gi|356607845|emb|CAFW01000076.1| 2628 3542 3 + 915 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67508.peg.1409 CDS gi|356607845|emb|CAFW01000076.1| 3553 4230 1 + 678 putative phosphoglycerate mutase - none -
fig|6666666.67508.peg.1410 CDS gi|356607845|emb|CAFW01000076.1| 4513 5676 1 + 1164 FIG00545033: hypothetical protein - none -
fig|6666666.67508.peg.1411 CDS gi|356607845|emb|CAFW01000076.1| 5679 6461 3 + 783 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase CBSS-279010.5.peg.587
fig|6666666.67508.peg.1412 CDS gi|356607845|emb|CAFW01000076.1| 7078 6464 -1 - 615 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.1413 CDS gi|356607845|emb|CAFW01000076.1| 8857 7118 -1 - 1740 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67508.peg.1414 CDS gi|356607845|emb|CAFW01000076.1| 10400 8847 -2 - 1554 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) CBSS-279010.5.peg.587;
CBSS-279010.5.peg.587;
EC699-706;
EC699-706
fig|6666666.67508.peg.1415 CDS gi|356607845|emb|CAFW01000076.1| 11161 10400 -1 - 762 Lactam utilization protein LamB CBSS-279010.5.peg.587;
EC699-706
fig|6666666.67508.peg.1416 CDS gi|356607845|emb|CAFW01000076.1| 11624 11277 -2 - 348 FIG00544953: hypothetical protein - none -
fig|6666666.67508.peg.1417 CDS gi|356607845|emb|CAFW01000076.1| 12735 11650 -3 - 1086 PROBABLE CONSERVED MEMBRANE PROTEIN - none -
fig|6666666.67508.peg.1418 CDS gi|356607845|emb|CAFW01000076.1| 13523 12771 -2 - 753 Putative alkanesulfonate metabolism utilization regulator - none -
fig|6666666.67508.peg.1419 CDS gi|356607845|emb|CAFW01000076.1| 13645 14904 1 + 1260 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.67508.peg.1420 CDS gi|356607845|emb|CAFW01000076.1| 14954 15913 2 + 960 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.1421 CDS gi|356607845|emb|CAFW01000076.1| 15916 16740 1 + 825 Putative uncharacterized protein BCG_3875c - none -
fig|6666666.67508.peg.1422 CDS gi|356607845|emb|CAFW01000076.1| 16740 18239 3 + 1500 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.1423 CDS gi|356607845|emb|CAFW01000076.1| 18798 18436 -3 - 363 hypothetical protein - none -
fig|6666666.67508.peg.1424 CDS gi|356607845|emb|CAFW01000076.1| 19821 18856 -3 - 966 hypothetical protein - none -
fig|6666666.67508.peg.1425 CDS gi|356607845|emb|CAFW01000076.1| 22268 20070 -2 - 2199 FIG00544841: hypothetical protein - none -
fig|6666666.67508.peg.1426 CDS gi|356607845|emb|CAFW01000076.1| 22472 23776 2 + 1305 UDP-galactopyranose mutase (EC 5.4.99.9) - none -
fig|6666666.67508.peg.1427 CDS gi|356607845|emb|CAFW01000076.1| 24269 23856 -2 - 414 hypothetical protein - none -
fig|6666666.67508.peg.1428 CDS gi|356607845|emb|CAFW01000076.1| 24710 25318 2 + 609 FIG00544357: hypothetical protein - none -
fig|6666666.67508.peg.1429 CDS gi|356607845|emb|CAFW01000076.1| 25537 27519 1 + 1983 Galactofuranosyl transferase (EC 2.-.-.-) - none -
fig|6666666.67508.peg.1430 CDS gi|356607845|emb|CAFW01000076.1| 27512 28036 2 + 525 FIG008913: Membrane-associated phospholipid phosphatase - none -
fig|6666666.67508.peg.1431 CDS gi|356607845|emb|CAFW01000076.1| 28033 29040 1 + 1008 putative membrane protein - none -
fig|6666666.67508.peg.1432 CDS gi|356607845|emb|CAFW01000076.1| 29187 31118 3 + 1932 hypothetical protein Rv3805c - none -
fig|6666666.67508.peg.1433 CDS gi|356607845|emb|CAFW01000076.1| 31286 32317 2 + 1032 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67508.peg.1434 CDS gi|356607845|emb|CAFW01000076.1| 32763 34694 3 + 1932 putative esterase Alpha-Amylase locus in Streptocococcus
fig|6666666.67508.peg.1435 CDS gi|356607845|emb|CAFW01000076.1| 34707 35243 3 + 537 FIG00544389: hypothetical protein - none -
fig|6666666.67508.peg.1436 CDS gi|356607845|emb|CAFW01000076.1| 35290 36243 1 + 954 hypothetical protein Rv3802c - none -
fig|6666666.67508.peg.1437 CDS gi|356607845|emb|CAFW01000076.1| 36323 38173 2 + 1851 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.1438 CDS gi|356607845|emb|CAFW01000076.1| 38467 43368 1 + 4902 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.67508.peg.1439 CDS gi|356607845|emb|CAFW01000076.1| 43349 44917 2 + 1569 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.67508.peg.1440 CDS gi|356607845|emb|CAFW01000076.1| 45117 44998 -3 - 120 hypothetical protein - none -
fig|6666666.67508.peg.1441 CDS gi|356607845|emb|CAFW01000076.1| 45154 47271 1 + 2118 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67508.peg.1442 CDS gi|356607845|emb|CAFW01000076.1| 47268 48098 3 + 831 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.67508.peg.1443 CDS gi|356607845|emb|CAFW01000076.1| 48952 48593 -1 - 360 FIG00544939: hypothetical protein - none -
fig|6666666.67508.peg.1444 CDS gi|356607845|emb|CAFW01000076.1| 49992 48949 -3 - 1044 hypothetical protein - none -
fig|6666666.67508.peg.1445 CDS gi|356607845|emb|CAFW01000076.1| 52500 49993 -3 - 2508 putative integral membrane protein - none -
fig|6666666.67508.peg.1446 CDS gi|356607845|emb|CAFW01000076.1| 53107 52514 -1 - 594 FIG00546304: hypothetical protein - none -
fig|6666666.67508.peg.1447 CDS gi|356607845|emb|CAFW01000076.1| 53856 53107 -3 - 750 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation
fig|6666666.67508.peg.1448 CDS gi|356607845|emb|CAFW01000076.1| 54288 56111 3 + 1824 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67508.peg.1449 CDS gi|356607845|emb|CAFW01000076.1| 56938 56144 -1 - 795 POSSIBLE METHYLTRANSFERASE (METHYLASE) - none -
fig|6666666.67508.peg.1450 CDS gi|356607845|emb|CAFW01000076.1| 59394 57961 -3 - 1434 conserved membrane protein - none -
fig|6666666.67508.peg.1451 CDS gi|356607845|emb|CAFW01000076.1| 60466 59438 -1 - 1029 FIG00547617: hypothetical protein - none -
fig|6666666.67508.peg.1452 CDS gi|356607845|emb|CAFW01000076.1| 64491 61516 -3 - 2976 Conserved putative integral membrane protein - none -
fig|6666666.67508.peg.1453 CDS gi|356607845|emb|CAFW01000076.1| 64665 64492 -3 - 174 FIG00543976: hypothetical protein - none -
fig|6666666.67508.peg.1454 CDS gi|356607845|emb|CAFW01000076.1| 65192 64677 -2 - 516 FIG00545938: hypothetical protein - none -
fig|6666666.67508.peg.1455 CDS gi|356607845|emb|CAFW01000076.1| 65428 66357 1 + 930 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.67508.peg.1456 CDS gi|356607845|emb|CAFW01000076.1| 66376 68058 1 + 1683 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.67508.peg.1457 CDS gi|356607845|emb|CAFW01000076.1| 68202 68765 3 + 564 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.67508.peg.1458 CDS gi|356607845|emb|CAFW01000076.1| 68808 70136 3 + 1329 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67508.peg.1459 CDS gi|356607845|emb|CAFW01000076.1| 71448 72527 3 + 1080 No significant database matches - none -
fig|6666666.67508.peg.1460 CDS gi|356607845|emb|CAFW01000076.1| 73746 72511 -3 - 1236 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67508.peg.1461 CDS gi|356607845|emb|CAFW01000076.1| 74316 73759 -3 - 558 FIG00548816: hypothetical protein - none -
fig|6666666.67508.peg.1462 CDS gi|356607845|emb|CAFW01000076.1| 74656 74321 -1 - 336 FIG00544010: hypothetical protein - none -
fig|6666666.67508.peg.1463 CDS gi|356607845|emb|CAFW01000076.1| 74806 75189 1 + 384 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation;
Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1464 CDS gi|356607845|emb|CAFW01000076.1| 75218 75583 2 + 366 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation;
Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1465 CDS gi|356607845|emb|CAFW01000076.1| 75609 76511 3 + 903 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1466 CDS gi|356607845|emb|CAFW01000076.1| 76511 77779 2 + 1269 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1467 CDS gi|356607845|emb|CAFW01000076.1| 77784 78431 3 + 648 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.67508.peg.1468 CDS gi|356607845|emb|CAFW01000076.1| 78431 79681 2 + 1251 FIG00544912: hypothetical protein - none -
fig|6666666.67508.peg.1469 CDS gi|356607845|emb|CAFW01000076.1| 82569 79678 -3 - 2892 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Proline, 4-hydroxyproline uptake and utilization;
Respiratory dehydrogenases 1
fig|6666666.67508.peg.1470 CDS gi|356607910|emb|CAFW01000075.1| 1648 668 -1 - 981 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67508.peg.1471 CDS gi|356607910|emb|CAFW01000075.1| 1647 1823 3 + 177 hypothetical protein - none -
fig|6666666.67508.peg.1472 CDS gi|356607910|emb|CAFW01000075.1| 1998 2921 3 + 924 Universal stress protein family - none -
fig|6666666.67508.peg.1473 CDS gi|356607910|emb|CAFW01000075.1| 3189 3437 3 + 249 FIG00545001: hypothetical protein - none -
fig|6666666.67508.peg.1474 CDS gi|356607910|emb|CAFW01000075.1| 3586 4194 1 + 609 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1475 CDS gi|356607910|emb|CAFW01000075.1| 5252 4191 -2 - 1062 Inner membrane protein translocase component YidC, Corynebacterium paraloge - none -
fig|6666666.67508.peg.1476 CDS gi|356607910|emb|CAFW01000075.1| 5298 6050 3 + 753 FIG054872: Sortase-like protein - none -
fig|6666666.67508.peg.1477 CDS gi|356607910|emb|CAFW01000075.1| 6060 6212 3 + 153 FIG060545: short hypothetical protein - none -
fig|6666666.67508.peg.1478 CDS gi|356607910|emb|CAFW01000075.1| 6871 6266 -1 - 606 FIG00544353: hypothetical protein - none -
fig|6666666.67508.peg.1479 CDS gi|356607910|emb|CAFW01000075.1| 6870 8096 3 + 1227 Hemoglobin-dependent two component system, sensory histidine kinase HrrS Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.1480 CDS gi|356607910|emb|CAFW01000075.1| 8136 8774 3 + 639 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.1481 CDS gi|356607910|emb|CAFW01000075.1| 9648 9010 -3 - 639 FIG071084: hypothetical protein - none -
fig|6666666.67508.peg.1482 CDS gi|356607910|emb|CAFW01000075.1| 9749 11254 2 + 1506 FIG00544355: hypothetical protein - none -
fig|6666666.67508.peg.1483 CDS gi|356607910|emb|CAFW01000075.1| 12460 11291 -1 - 1170 putative transport protein - none -
fig|6666666.67508.peg.1484 CDS gi|356607910|emb|CAFW01000075.1| 12578 13480 2 + 903 putative transcription regulator - none -
fig|6666666.67508.peg.1485 CDS gi|356607910|emb|CAFW01000075.1| 13658 13461 -2 - 198 Uncharacterized HTH-type transcriptional regulator MJ0272 - none -
fig|6666666.67508.peg.1486 CDS gi|356607910|emb|CAFW01000075.1| 14177 13677 -2 - 501 hypothetical protein - none -
fig|6666666.67508.peg.1487 CDS gi|356607910|emb|CAFW01000075.1| 15446 14292 -2 - 1155 putative amidase - none -
fig|6666666.67508.peg.1488 CDS gi|356607910|emb|CAFW01000075.1| 16791 16189 -3 - 603 Superoxide dismutase [Mn] (EC 1.15.1.1) Oxidative stress
fig|6666666.67508.peg.1489 CDS gi|356607910|emb|CAFW01000075.1| 16942 17592 1 + 651 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) Peptide methionine sulfoxide reductase
fig|6666666.67508.peg.1490 CDS gi|356607910|emb|CAFW01000075.1| 19534 17594 -1 - 1941 Predicted membrane protein (DUF2319) - none -
fig|6666666.67508.peg.1491 CDS gi|356607910|emb|CAFW01000075.1| 19623 20579 3 + 957 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate
fig|6666666.67508.peg.1492 CDS gi|356607910|emb|CAFW01000075.1| 20811 20614 -3 - 198 hypothetical protein - none -
fig|6666666.67508.peg.1493 CDS gi|356607910|emb|CAFW01000075.1| 21285 22301 3 + 1017 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.1494 CDS gi|356607910|emb|CAFW01000075.1| 22308 23828 3 + 1521 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.1495 CDS gi|356607910|emb|CAFW01000075.1| 23830 24699 1 + 870 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.1496 CDS gi|356607910|emb|CAFW01000075.1| 27847 25976 -1 - 1872 Sporulation protein and related proteins - none -
fig|6666666.67508.peg.1497 CDS gi|356607910|emb|CAFW01000075.1| 27973 28770 1 + 798 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.67508.peg.1498 CDS gi|356607910|emb|CAFW01000075.1| 28803 29723 3 + 921 FIG00548032: hypothetical protein - none -
fig|6666666.67508.peg.1499 CDS gi|356607910|emb|CAFW01000075.1| 29973 31016 3 + 1044 hypothetical protein - none -
fig|6666666.67508.peg.1500 CDS gi|356607910|emb|CAFW01000075.1| 32235 31186 -3 - 1050 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67508.peg.1501 CDS gi|356607945|emb|CAFW01000073.1| 120 440 3 + 321 Mobile element protein - none -
fig|6666666.67508.peg.1502 CDS gi|356607945|emb|CAFW01000073.1| 2007 4004 3 + 1998 putative exonuclease - none -
fig|6666666.67508.peg.1503 CDS gi|356607945|emb|CAFW01000073.1| 4001 5659 2 + 1659 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) DNA repair, bacterial UvrD and related helicases
fig|6666666.67508.peg.1504 CDS gi|356607945|emb|CAFW01000073.1| 7172 6789 -2 - 384 Mobile element protein - none -
fig|6666666.67508.peg.1505 CDS gi|356607950|emb|CAFW01000072.1| 125 445 2 + 321 Mobile element protein - none -
fig|6666666.67508.peg.1506 CDS gi|356607950|emb|CAFW01000072.1| 657 2177 3 + 1521 Transposase, IS4 - none -
fig|6666666.67508.peg.1507 CDS gi|356607950|emb|CAFW01000072.1| 2282 2602 2 + 321 Mobile element protein - none -
fig|6666666.67508.peg.1508 CDS gi|356607952|emb|CAFW01000071.1| 207 1547 3 + 1341 Mobile element protein - none -
fig|6666666.67508.peg.1509 CDS gi|356607954|emb|CAFW01000070.1| 1308 73 -3 - 1236 Transposase - none -
fig|6666666.67508.peg.1510 CDS gi|356607955|emb|CAFW01000069.1| 677 1093 2 + 417 InterPro IPR001822:IPR002048 COGs COG1961 - none -
fig|6666666.67508.peg.1511 CDS gi|356607955|emb|CAFW01000069.1| 2198 2314 2 + 117 hypothetical protein - none -
fig|6666666.67508.peg.1512 CDS gi|356607960|emb|CAFW01000068.1| 27 326 3 + 300 Transposase - none -
fig|6666666.67508.peg.1513 CDS gi|356607960|emb|CAFW01000068.1| 346 486 1 + 141 Mobile element protein - none -
fig|6666666.67508.peg.1514 CDS gi|356607960|emb|CAFW01000068.1| 593 1213 2 + 621 Transposase - none -
fig|6666666.67508.peg.1515 CDS gi|356607960|emb|CAFW01000068.1| 2472 1429 -3 - 1044 Transposase and inactivated derivatives, IS30 family - none -
fig|6666666.67508.peg.1516 CDS gi|356607960|emb|CAFW01000068.1| 2815 2531 -1 - 285 Mobile element protein - none -
fig|6666666.67508.peg.1517 CDS gi|356607960|emb|CAFW01000068.1| 3247 2921 -1 - 327 Mobile element protein - none -
fig|6666666.67508.peg.1518 CDS gi|356607960|emb|CAFW01000068.1| 4775 4371 -2 - 405 Mobile element protein - none -
fig|6666666.67508.peg.1519 CDS gi|356607960|emb|CAFW01000068.1| 5097 5462 3 + 366 hypothetical protein - none -
fig|6666666.67508.peg.1520 CDS gi|356607960|emb|CAFW01000068.1| 5631 5882 3 + 252 hypothetical protein - none -
fig|6666666.67508.peg.1521 CDS gi|356607960|emb|CAFW01000068.1| 5924 7033 2 + 1110 Transcriptional regulator, AraC family - none -
fig|6666666.67508.peg.1522 CDS gi|356607960|emb|CAFW01000068.1| 7152 8102 3 + 951 ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component - none -
fig|6666666.67508.peg.1523 CDS gi|356607960|emb|CAFW01000068.1| 8092 9156 1 + 1065 hypothetical protein - none -
fig|6666666.67508.peg.1524 CDS gi|356607960|emb|CAFW01000068.1| 10361 9300 -2 - 1062 hypothetical protein - none -
fig|6666666.67508.peg.1525 CDS gi|356607960|emb|CAFW01000068.1| 11766 10582 -3 - 1185 Mobile element protein - none -
fig|6666666.67508.peg.1526 CDS gi|356607960|emb|CAFW01000068.1| 11881 12162 1 + 282 Mobile element protein - none -
fig|6666666.67508.peg.1527 CDS gi|356607960|emb|CAFW01000068.1| 12219 12800 3 + 582 Mobile element protein - none -
fig|6666666.67508.peg.1528 CDS gi|356607960|emb|CAFW01000068.1| 12943 13155 1 + 213 Mobile element protein - none -
fig|6666666.67508.peg.1529 CDS gi|356607974|emb|CAFW01000067.1| 452 132 -2 - 321 hypothetical protein - none -
fig|6666666.67508.peg.1530 CDS gi|356607974|emb|CAFW01000067.1| 1456 518 -1 - 939 hypothetical protein - none -
fig|6666666.67508.peg.1531 CDS gi|356607974|emb|CAFW01000067.1| 2508 1453 -3 - 1056 hypothetical protein - none -
fig|6666666.67508.peg.1532 CDS gi|356607974|emb|CAFW01000067.1| 2964 3914 3 + 951 hypothetical protein - none -
fig|6666666.67508.peg.1533 CDS gi|356607974|emb|CAFW01000067.1| 4306 4749 1 + 444 hypothetical protein - none -
fig|6666666.67508.peg.1534 CDS gi|356607974|emb|CAFW01000067.1| 6193 6459 1 + 267 DUF1526 domain-containing protein - none -
fig|6666666.67508.peg.1535 CDS gi|356607983|emb|CAFW01000066.1| 133 300 1 + 168 hypothetical protein - none -
fig|6666666.67508.peg.1536 CDS gi|356607983|emb|CAFW01000066.1| 810 941 3 + 132 hypothetical protein - none -
fig|6666666.67508.peg.1537 CDS gi|356607986|emb|CAFW01000065.1| 1027 1194 1 + 168 hypothetical protein - none -
fig|6666666.67508.peg.1538 CDS gi|356607989|emb|CAFW01000064.1| 1310 993 -2 - 318 hypothetical protein - none -
fig|6666666.67508.peg.1539 CDS gi|356607989|emb|CAFW01000064.1| 1731 1856 3 + 126 hypothetical protein - none -
fig|6666666.67508.peg.1540 CDS gi|356607989|emb|CAFW01000064.1| 1976 2560 2 + 585 Plasmid partitioning protein ParA - none -
fig|6666666.67508.peg.1541 CDS gi|356607989|emb|CAFW01000064.1| 2560 2799 1 + 240 hypothetical protein - none -
fig|6666666.67508.peg.1542 CDS gi|356607989|emb|CAFW01000064.1| 3501 2881 -3 - 621 hypothetical protein - none -
fig|6666666.67508.peg.1543 CDS gi|356607995|emb|CAFW01000063.1| 40 351 1 + 312 Transposase - none -
fig|6666666.67508.peg.1544 CDS gi|356607995|emb|CAFW01000063.1| 527 357 -2 - 171 hypothetical protein - none -
fig|6666666.67508.peg.1545 CDS gi|356607995|emb|CAFW01000063.1| 1834 668 -1 - 1167 hypothetical protein - none -
fig|6666666.67508.peg.1546 CDS gi|356607997|emb|CAFW01000061.1| 1717 902 -1 - 816 hypothetical protein - none -
fig|6666666.67508.peg.1547 CDS gi|356607997|emb|CAFW01000061.1| 1676 1993 2 + 318 hypothetical protein - none -
fig|6666666.67508.peg.1548 CDS gi|356607997|emb|CAFW01000061.1| 2393 3061 2 + 669 hypothetical protein - none -
fig|6666666.67508.peg.1549 CDS gi|356607997|emb|CAFW01000061.1| 3293 3141 -2 - 153 hypothetical protein - none -
fig|6666666.67508.peg.1550 CDS gi|356607997|emb|CAFW01000061.1| 5381 4935 -2 - 447 hypothetical protein - none -
fig|6666666.67508.peg.1551 CDS gi|356608006|emb|CAFW01000060.1| 168 311 3 + 144 hypothetical protein - none -
fig|6666666.67508.peg.1552 CDS gi|356608006|emb|CAFW01000060.1| 304 561 1 + 258 hypothetical protein - none -
fig|6666666.67508.peg.1553 CDS gi|356608009|emb|CAFW01000059.1| 20 430 2 + 411 Mobile element protein - none -
fig|6666666.67508.peg.1554 CDS gi|356608009|emb|CAFW01000059.1| 498 1127 3 + 630 Replication protein - none -
fig|6666666.67508.peg.1555 CDS gi|356608011|emb|CAFW01000058.1| 70 420 1 + 351 Mobile element protein - none -
fig|6666666.67508.peg.1556 CDS gi|356608011|emb|CAFW01000058.1| 716 507 -2 - 210 hypothetical protein - none -
fig|6666666.67508.peg.1557 CDS gi|356608011|emb|CAFW01000058.1| 2339 1101 -2 - 1239 Membrane transport protein - none -
fig|6666666.67508.peg.1558 CDS gi|356608011|emb|CAFW01000058.1| 4756 3167 -1 - 1590 Transcriptional regulator, AraC family - none -
fig|6666666.67508.peg.1559 CDS gi|356608011|emb|CAFW01000058.1| 4921 5742 1 + 822 iron-chelator utilization protein - none -
fig|6666666.67508.peg.1560 CDS gi|356608011|emb|CAFW01000058.1| 5830 7017 1 + 1188 Membrane protein mosC - none -
fig|6666666.67508.peg.1561 CDS gi|356608011|emb|CAFW01000058.1| 7014 8102 3 + 1089 periplasmic binding protein - none -
fig|6666666.67508.peg.1562 CDS gi|356608011|emb|CAFW01000058.1| 8440 9216 1 + 777 periplasmic binding protein - none -
fig|6666666.67508.peg.1563 CDS gi|356608011|emb|CAFW01000058.1| 9297 10355 3 + 1059 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67508.peg.1564 CDS gi|356608011|emb|CAFW01000058.1| 10352 11431 2 + 1080 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67508.peg.1565 CDS gi|356608011|emb|CAFW01000058.1| 11428 12312 1 + 885 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67508.peg.1566 CDS gi|356608011|emb|CAFW01000058.1| 12312 13919 3 + 1608 hypothetical protein - none -
fig|6666666.67508.peg.1567 CDS gi|356608011|emb|CAFW01000058.1| 13916 15514 2 + 1599 ABC transporter related - none -
fig|6666666.67508.peg.1568 CDS gi|356608011|emb|CAFW01000058.1| 15486 16403 3 + 918 Transcriptional regulator, AraC family - none -
fig|6666666.67508.peg.1569 CDS gi|356608026|emb|CAFW01000057.1| 105 1391 3 + 1287 Mobile element protein - none -
fig|6666666.67508.peg.1570 CDS gi|356608028|emb|CAFW01000056.1| 313 618 1 + 306 Replication protein - none -
fig|6666666.67508.peg.1571 CDS gi|356608030|emb|CAFW01000054.1| 42 209 3 + 168 hypothetical protein - none -
fig|6666666.67508.peg.1572 CDS gi|356608030|emb|CAFW01000054.1| 293 1237 2 + 945 hypothetical protein - none -
fig|6666666.67508.peg.1573 CDS gi|356608031|emb|CAFW01000053.1| 325 687 1 + 363 hypothetical protein - none -
fig|6666666.67508.peg.1574 CDS gi|356608031|emb|CAFW01000053.1| 1552 1716 1 + 165 hypothetical protein - none -
fig|6666666.67508.peg.1575 CDS gi|356608031|emb|CAFW01000053.1| 1820 2224 2 + 405 hypothetical protein - none -
fig|6666666.67508.peg.1576 CDS gi|356608037|emb|CAFW01000052.1| 802 572 -1 - 231 hypothetical protein - none -
fig|6666666.67508.peg.1577 CDS gi|356608039|emb|CAFW01000051.1| 18 413 3 + 396 putative transposase - none -
fig|6666666.67508.peg.1578 CDS gi|356608039|emb|CAFW01000051.1| 735 1964 3 + 1230 Mobile element protein - none -
fig|6666666.67508.peg.1579 CDS gi|356608041|emb|CAFW01000050.1| 22 423 1 + 402 Mobile element protein - none -
fig|6666666.67508.peg.1580 CDS gi|356608041|emb|CAFW01000050.1| 829 1203 1 + 375 InterPro IPR001822:IPR002048 COGs COG1961 - none -
fig|6666666.67508.peg.1581 CDS gi|356608041|emb|CAFW01000050.1| 1621 1737 1 + 117 hypothetical protein - none -
fig|6666666.67508.peg.1582 CDS gi|356608041|emb|CAFW01000050.1| 1759 2028 1 + 270 InterPro IPR001822:IPR002048 COGs COG1961 - none -
fig|6666666.67508.peg.1583 CDS gi|356608041|emb|CAFW01000050.1| 3370 3498 1 + 129 hypothetical protein - none -
fig|6666666.67508.peg.1584 CDS gi|356608041|emb|CAFW01000050.1| 4098 4409 3 + 312 hypothetical protein - none -
fig|6666666.67508.peg.1585 CDS gi|356608041|emb|CAFW01000050.1| 5019 4771 -3 - 249 Mobile element protein - none -
fig|6666666.67508.peg.1586 CDS gi|356608046|emb|CAFW01000049.1| 629 760 2 + 132 hypothetical protein - none -
fig|6666666.67508.peg.1587 CDS gi|356608046|emb|CAFW01000049.1| 1781 2203 2 + 423 hypothetical protein - none -
fig|6666666.67508.peg.1588 CDS gi|356608046|emb|CAFW01000049.1| 2270 2464 2 + 195 hypothetical protein - none -
fig|6666666.67508.peg.1589 CDS gi|356608050|emb|CAFW01000048.1| 15 377 3 + 363 Mobile element protein - none -
fig|6666666.67508.peg.1590 CDS gi|356608051|emb|CAFW01000047.1| 1111 1257 1 + 147 hypothetical protein - none -
fig|6666666.67508.peg.1591 CDS gi|356608051|emb|CAFW01000047.1| 2524 3963 1 + 1440 putative major facilitator superfamily (MFS) transporter - none -
fig|6666666.67508.peg.1592 CDS gi|356608051|emb|CAFW01000047.1| 4169 4462 2 + 294 hypothetical protein - none -
fig|6666666.67508.peg.1593 CDS gi|356608051|emb|CAFW01000047.1| 4797 5018 3 + 222 hypothetical protein - none -
fig|6666666.67508.peg.1594 CDS gi|356608051|emb|CAFW01000047.1| 5439 5576 3 + 138 hypothetical protein - none -
fig|6666666.67508.peg.1595 CDS gi|356608051|emb|CAFW01000047.1| 6504 5986 -3 - 519 Transcriptional regulator, MarR family - none -
fig|6666666.67508.peg.1596 CDS gi|356608051|emb|CAFW01000047.1| 6620 7192 2 + 573 Oxidoreductase (EC 1.1.1.-) - none -
fig|6666666.67508.peg.1597 CDS gi|356608051|emb|CAFW01000047.1| 7399 7821 1 + 423 hypothetical protein - none -
fig|6666666.67508.peg.1598 CDS gi|356608051|emb|CAFW01000047.1| 7912 8910 1 + 999 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67508.peg.1599 CDS gi|356608051|emb|CAFW01000047.1| 8933 9625 2 + 693 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.67508.peg.1600 CDS gi|356608051|emb|CAFW01000047.1| 9637 10389 1 + 753 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) - none -
fig|6666666.67508.peg.1601 CDS gi|356608051|emb|CAFW01000047.1| 10464 11585 3 + 1122 FIG00544679: hypothetical protein - none -
fig|6666666.67508.peg.1602 CDS gi|356608051|emb|CAFW01000047.1| 12087 11659 -3 - 429 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.67508.peg.1603 CDS gi|356608051|emb|CAFW01000047.1| 12223 13602 1 + 1380 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.67508.peg.1604 CDS gi|356608051|emb|CAFW01000047.1| 14027 15163 2 + 1137 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.67508.peg.1605 CDS gi|356608051|emb|CAFW01000047.1| 15156 15839 3 + 684 Trk system potassium uptake protein TrkA Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.67508.peg.1606 CDS gi|356608051|emb|CAFW01000047.1| 15938 16450 2 + 513 FIG00544046: hypothetical protein - none -
fig|6666666.67508.peg.1607 CDS gi|356608051|emb|CAFW01000047.1| 16462 16953 1 + 492 FIG00545596: hypothetical protein - none -
fig|6666666.67508.peg.1608 CDS gi|356608051|emb|CAFW01000047.1| 19028 16983 -2 - 2046 FIG00543878: hypothetical protein - none -
fig|6666666.67508.peg.1609 CDS gi|356608051|emb|CAFW01000047.1| 19027 20592 1 + 1566 hypothetical protein - none -
fig|6666666.67508.peg.1610 CDS gi|356608051|emb|CAFW01000047.1| 20622 20786 3 + 165 hypothetical protein - none -
fig|6666666.67508.peg.1611 CDS gi|356608051|emb|CAFW01000047.1| 20895 21518 3 + 624 Putative secreted protein - none -
fig|6666666.67508.peg.1612 CDS gi|356608051|emb|CAFW01000047.1| 21525 22790 3 + 1266 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.67508.peg.1613 CDS gi|356608051|emb|CAFW01000047.1| 23108 22863 -2 - 246 FIG00546281: hypothetical protein - none -
fig|6666666.67508.peg.1614 CDS gi|356608051|emb|CAFW01000047.1| 23601 23098 -3 - 504 putative ribonuclease - none -
fig|6666666.67508.peg.1615 CDS gi|356608051|emb|CAFW01000047.1| 23702 25621 2 + 1920 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417
fig|6666666.67508.peg.1616 CDS gi|356608051|emb|CAFW01000047.1| 25905 25636 -3 - 270 FIG00546846: hypothetical protein - none -
fig|6666666.67508.peg.1617 CDS gi|356608051|emb|CAFW01000047.1| 26121 26270 3 + 150 hypothetical protein - none -
fig|6666666.67508.peg.1618 CDS gi|356608051|emb|CAFW01000047.1| 26513 27721 2 + 1209 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) Sialic Acid Metabolism
fig|6666666.67508.peg.1619 CDS gi|356608051|emb|CAFW01000047.1| 29174 30475 2 + 1302 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.67508.peg.1620 CDS gi|356608051|emb|CAFW01000047.1| 30475 32001 1 + 1527 Glycosyl transferase, group 1 - none -
fig|6666666.67508.peg.1621 CDS gi|356608051|emb|CAFW01000047.1| 34198 32027 -1 - 2172 hypothetical protein - none -
fig|6666666.67508.peg.1622 CDS gi|356608051|emb|CAFW01000047.1| 35110 34232 -1 - 879 ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.1623 CDS gi|356608051|emb|CAFW01000047.1| 36035 35097 -2 - 939 O-antigen export system, permease protein - none -
fig|6666666.67508.peg.1624 CDS gi|356608051|emb|CAFW01000047.1| 38269 36113 -1 - 2157 hypothetical protein - none -
fig|6666666.67508.peg.1625 CDS gi|356608051|emb|CAFW01000047.1| 39197 38298 -2 - 900 Glycosyl transferase, group 2 family protein (EC 2.4.-.-) - none -
fig|6666666.67508.peg.1626 CDS gi|356608051|emb|CAFW01000047.1| 39585 40046 3 + 462 hypothetical protein - none -
fig|6666666.67508.peg.1627 CDS gi|356608051|emb|CAFW01000047.1| 40287 44873 3 + 4587 hypothetical protein - none -
fig|6666666.67508.peg.1628 CDS gi|356608051|emb|CAFW01000047.1| 45694 46524 1 + 831 Mobile element protein - none -
fig|6666666.67508.peg.1629 CDS gi|356608051|emb|CAFW01000047.1| 47863 46853 -1 - 1011 hypothetical protein - none -
fig|6666666.67508.peg.1630 CDS gi|356608051|emb|CAFW01000047.1| 48913 49200 1 + 288 hypothetical protein - none -
fig|6666666.67508.peg.1631 CDS gi|356608096|emb|CAFW01000046.1| 163 396 1 + 234 Mobile element protein - none -
fig|6666666.67508.peg.1632 CDS gi|356608096|emb|CAFW01000046.1| 1057 425 -1 - 633 hypothetical protein - none -
fig|6666666.67508.peg.1633 CDS gi|356608096|emb|CAFW01000046.1| 2830 1481 -1 - 1350 FIG00547479: hypothetical protein - none -
fig|6666666.67508.peg.1634 CDS gi|356608096|emb|CAFW01000046.1| 2882 3091 2 + 210 FIG00544849: hypothetical protein - none -
fig|6666666.67508.peg.1635 CDS gi|356608096|emb|CAFW01000046.1| 3103 3402 1 + 300 FIG00547912: hypothetical protein - none -
fig|6666666.67508.peg.1636 CDS gi|356608096|emb|CAFW01000046.1| 5506 3365 -1 - 2142 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67508.peg.1637 CDS gi|356608096|emb|CAFW01000046.1| 5574 7427 3 + 1854 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.1638 CDS gi|356608096|emb|CAFW01000046.1| 7600 8286 1 + 687 FIG00543880: hypothetical protein - none -
fig|6666666.67508.peg.1639 CDS gi|356608096|emb|CAFW01000046.1| 8410 8751 1 + 342 hypothetical protein - none -
fig|6666666.67508.peg.1640 CDS gi|356608096|emb|CAFW01000046.1| 9673 10116 1 + 444 Excisionase domain protein - none -
fig|6666666.67508.peg.1641 CDS gi|356608096|emb|CAFW01000046.1| 11219 10140 -2 - 1080 hypothetical protein - none -
fig|6666666.67508.peg.1642 CDS gi|356608096|emb|CAFW01000046.1| 11562 11810 3 + 249 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.67508.peg.1643 CDS gi|356608096|emb|CAFW01000046.1| 11820 11939 3 + 120 hypothetical protein - none -
fig|6666666.67508.peg.1644 CDS gi|356608096|emb|CAFW01000046.1| 11967 12314 3 + 348 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.67508.peg.1645 CDS gi|356608096|emb|CAFW01000046.1| 12302 12787 2 + 486 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB - none -
fig|6666666.67508.peg.1646 CDS gi|356608096|emb|CAFW01000046.1| 13925 12816 -2 - 1110 Uncharacterized protein Rv1841c/MT1889 - none -
fig|6666666.67508.peg.1647 CDS gi|356608096|emb|CAFW01000046.1| 15349 13925 -1 - 1425 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.67508.peg.1648 CDS gi|356608096|emb|CAFW01000046.1| 15500 16642 2 + 1143 Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster - none -
fig|6666666.67508.peg.1649 CDS gi|356608096|emb|CAFW01000046.1| 16746 17777 3 + 1032 Heat-inducible transcription repressor HrcA GroEL GroES;
Heat shock dnaK gene cluster extended
fig|6666666.67508.peg.1650 CDS gi|356608096|emb|CAFW01000046.1| 17831 18985 2 + 1155 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.67508.peg.1651 CDS gi|356608096|emb|CAFW01000046.1| 19012 19821 1 + 810 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.67508.peg.1652 CDS gi|356608096|emb|CAFW01000046.1| 19836 20813 3 + 978 Phosphate starvation-inducible protein PhoH, predicted ATPase Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.67508.peg.1653 CDS gi|356608096|emb|CAFW01000046.1| 20813 21388 2 + 576 FIG000233: metal-dependent hydrolase - none -
fig|6666666.67508.peg.1654 CDS gi|356608096|emb|CAFW01000046.1| 21459 22313 3 + 855 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67508.peg.1655 CDS gi|356608096|emb|CAFW01000046.1| 22935 25469 3 + 2535 CRISPR-associated helicase Cas3, protein CRISPRs
fig|6666666.67508.peg.1656 CDS gi|356608096|emb|CAFW01000046.1| 25573 27297 1 + 1725 CRISPR-associated protein, Cse1 family CRISPRs
fig|6666666.67508.peg.1657 CDS gi|356608096|emb|CAFW01000046.1| 28004 29161 2 + 1158 CRISPR-associated protein, CT1975 family - none -
fig|6666666.67508.peg.1658 CDS gi|356608096|emb|CAFW01000046.1| 29291 29893 2 + 603 CRISPR-associated protein, CT1976 - none -
fig|6666666.67508.peg.1659 CDS gi|356608096|emb|CAFW01000046.1| 29911 30591 1 + 681 CRISPR-associated protein, CT1974 - none -
fig|6666666.67508.peg.1660 CDS gi|356608096|emb|CAFW01000046.1| 30596 31534 2 + 939 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.67508.peg.1661 CDS gi|356608096|emb|CAFW01000046.1| 32228 32374 2 + 147 hypothetical protein - none -
fig|6666666.67508.peg.1662 CDS gi|356608124|emb|CAFW01000045.1| 70 378 1 + 309 Mobile element protein - none -
fig|6666666.67508.peg.1663 CDS gi|356608124|emb|CAFW01000045.1| 375 647 3 + 273 Mobile element protein - none -
fig|6666666.67508.peg.1664 CDS gi|356608124|emb|CAFW01000045.1| 721 1269 1 + 549 Mobile element protein - none -
fig|6666666.67508.peg.1665 CDS gi|356608126|emb|CAFW01000044.1| 326 36 -2 - 291 putative transposase - none -
fig|6666666.67508.peg.1666 CDS gi|356608126|emb|CAFW01000044.1| 1195 281 -1 - 915 putative transposase - none -
fig|6666666.67508.peg.1667 CDS gi|356608127|emb|CAFW01000043.1| 1254 880 -3 - 375 site-specific recombinase - none -
fig|6666666.67508.peg.1668 CDS gi|356608127|emb|CAFW01000043.1| 2616 2221 -3 - 396 putative transposase - none -
fig|6666666.67508.peg.1669 CDS gi|356608131|emb|CAFW01000042.1| 554 408 -2 - 147 Transposase - none -
fig|6666666.67508.peg.1670 CDS gi|356608131|emb|CAFW01000042.1| 1634 1798 2 + 165 hypothetical protein - none -
fig|6666666.67508.peg.1671 CDS gi|356608131|emb|CAFW01000042.1| 4518 3337 -3 - 1182 hypothetical protein - none -
fig|6666666.67508.peg.1672 CDS gi|356608137|emb|CAFW01000041.1| 4666 3623 -1 - 1044 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67508.peg.1673 CDS gi|356608137|emb|CAFW01000041.1| 6491 4770 -2 - 1722 Pyruvate decarboxylase (EC 4.1.1.1); Alpha-keto-acid decarboxylase (EC 4.1.1.-) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.1674 CDS gi|356608137|emb|CAFW01000041.1| 6579 7781 3 + 1203 transcriptional regulator - none -
fig|6666666.67508.peg.1675 CDS gi|356608137|emb|CAFW01000041.1| 8638 7850 -1 - 789 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.1676 CDS gi|356608137|emb|CAFW01000041.1| 9506 8631 -2 - 876 ABC-type transporter, permease component - none -
fig|6666666.67508.peg.1677 CDS gi|356608137|emb|CAFW01000041.1| 10525 9503 -1 - 1023 ABC transporter substrate-binding protein - none -
fig|6666666.67508.peg.1678 CDS gi|356608137|emb|CAFW01000041.1| 11293 11667 1 + 375 CDS_ID OB3317 - none -
fig|6666666.67508.peg.1679 CDS gi|356608137|emb|CAFW01000041.1| 12097 13629 1 + 1533 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67508.peg.1680 CDS gi|356608137|emb|CAFW01000041.1| 13626 14279 3 + 654 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67508.peg.1681 CDS gi|356608137|emb|CAFW01000041.1| 14364 15383 3 + 1020 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67508.peg.1682 CDS gi|356608137|emb|CAFW01000041.1| 15373 16848 1 + 1476 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.67508.peg.1683 CDS gi|356608137|emb|CAFW01000041.1| 16862 18070 2 + 1209 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67508.peg.1684 CDS gi|356608137|emb|CAFW01000041.1| 18073 18936 1 + 864 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67508.peg.1685 CDS gi|356608137|emb|CAFW01000041.1| 20307 19027 -3 - 1281 putative transmembrane symporter - none -
fig|6666666.67508.peg.1686 CDS gi|356608137|emb|CAFW01000041.1| 20483 20962 2 + 480 putative tryptophan transpoter - none -
fig|6666666.67508.peg.1687 CDS gi|356608137|emb|CAFW01000041.1| 21206 22243 2 + 1038 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.1688 CDS gi|356608137|emb|CAFW01000041.1| 22948 23544 1 + 597 hypothetical protein - none -
fig|6666666.67508.peg.1689 CDS gi|356608137|emb|CAFW01000041.1| 23673 24341 3 + 669 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.67508.peg.1690 CDS gi|356608137|emb|CAFW01000041.1| 24443 24679 2 + 237 Copper chaperone Copper homeostasis
fig|6666666.67508.peg.1691 CDS gi|356608137|emb|CAFW01000041.1| 24899 26779 2 + 1881 Heavy-Metal transporting ATPase - none -
fig|6666666.67508.peg.1692 CDS gi|356608137|emb|CAFW01000041.1| 26889 27860 3 + 972 Sodium - Bile acid symporter - none -
fig|6666666.67508.peg.1693 CDS gi|356608137|emb|CAFW01000041.1| 27876 28187 3 + 312 No significant database matches - none -
fig|6666666.67508.peg.1694 CDS gi|356608137|emb|CAFW01000041.1| 28588 28280 -1 - 309 hypothetical membrane protein - none -
fig|6666666.67508.peg.1695 CDS gi|356608137|emb|CAFW01000041.1| 29318 28605 -2 - 714 Branched-chain amino acid transport protein azlC - none -
fig|6666666.67508.peg.1696 CDS gi|356608137|emb|CAFW01000041.1| 30032 29436 -2 - 597 Putative transcriptional regulator - none -
fig|6666666.67508.peg.1697 CDS gi|356608137|emb|CAFW01000041.1| 31444 30032 -1 - 1413 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.67508.peg.1698 CDS gi|356608137|emb|CAFW01000041.1| 31578 32081 3 + 504 MutT/nudix family protein - none -
fig|6666666.67508.peg.1699 CDS gi|356608137|emb|CAFW01000041.1| 32111 34396 2 + 2286 probable secreted protein. - none -
fig|6666666.67508.peg.1700 CDS gi|356608137|emb|CAFW01000041.1| 34380 37934 3 + 3555 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.67508.peg.1701 CDS gi|356608137|emb|CAFW01000041.1| 38375 38911 2 + 537 Protein yceI precursor - none -
fig|6666666.67508.peg.1702 CDS gi|356608137|emb|CAFW01000041.1| 40745 39012 -2 - 1734 ABC-type transport system TetB - none -
fig|6666666.67508.peg.1703 CDS gi|356608137|emb|CAFW01000041.1| 42154 40742 -1 - 1413 FIG00547058: hypothetical protein - none -
fig|6666666.67508.peg.1704 CDS gi|356608137|emb|CAFW01000041.1| 42826 42392 -1 - 435 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein Alkylphosphonate utilization
fig|6666666.67508.peg.1705 CDS gi|356608137|emb|CAFW01000041.1| 42959 45532 2 + 2574 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67508.peg.1706 CDS gi|356608137|emb|CAFW01000041.1| 45759 46304 3 + 546 putative RNA polymerase sigma factor - none -
fig|6666666.67508.peg.1707 CDS gi|356608137|emb|CAFW01000041.1| 46518 46402 -3 - 117 hypothetical protein - none -
fig|6666666.67508.peg.1708 CDS gi|356608137|emb|CAFW01000041.1| 46565 47491 2 + 927 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.67508.peg.1709 CDS gi|356608137|emb|CAFW01000041.1| 47499 47822 3 + 324 Thioredoxin - none -
fig|6666666.67508.peg.1710 CDS gi|356608137|emb|CAFW01000041.1| 48131 49315 2 + 1185 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.67508.peg.1711 CDS gi|356608137|emb|CAFW01000041.1| 50075 49428 -2 - 648 FIG007808: hypothetical protein - none -
fig|6666666.67508.peg.1712 CDS gi|356608137|emb|CAFW01000041.1| 51361 50201 -1 - 1161 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67508.peg.1713 CDS gi|356608137|emb|CAFW01000041.1| 52234 51377 -1 - 858 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67508.peg.1714 CDS gi|356608137|emb|CAFW01000041.1| 52835 52236 -2 - 600 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.67508.peg.1715 CDS gi|356608137|emb|CAFW01000041.1| 53937 52954 -3 - 984 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster
fig|6666666.67508.peg.1716 CDS gi|356608137|emb|CAFW01000041.1| 54249 53974 -3 - 276 Protein YidD - none -
fig|6666666.67508.peg.1717 CDS gi|356608137|emb|CAFW01000041.1| 54396 54250 -3 - 147 hypothetical protein - none -
fig|6666666.67508.peg.1718 CDS gi|356608137|emb|CAFW01000041.1| 54780 54637 -3 - 144 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.67508.peg.1719 CDS gi|356608137|emb|CAFW01000041.1| 55494 57431 3 + 1938 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.67508.peg.1720 CDS gi|356608137|emb|CAFW01000041.1| 58204 59400 1 + 1197 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.67508.peg.1721 CDS gi|356608137|emb|CAFW01000041.1| 59413 60705 1 + 1293 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1;
Hypothetical Coupled to RecF
fig|6666666.67508.peg.1722 CDS gi|356608137|emb|CAFW01000041.1| 60698 61294 2 + 597 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.67508.peg.1723 CDS gi|356608137|emb|CAFW01000041.1| 61594 63669 1 + 2076 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67508.peg.1724 CDS gi|356608137|emb|CAFW01000041.1| 63776 64498 2 + 723 No significant database matches - none -
fig|6666666.67508.peg.1725 CDS gi|356608137|emb|CAFW01000041.1| 65630 65773 2 + 144 hypothetical protein - none -
fig|6666666.67508.peg.1726 CDS gi|356608137|emb|CAFW01000041.1| 65991 66272 3 + 282 Mobile element protein - none -
fig|6666666.67508.peg.1727 CDS gi|356608137|emb|CAFW01000041.1| 66686 67159 2 + 474 Mobile element protein - none -
fig|6666666.67508.peg.1728 CDS gi|356608137|emb|CAFW01000041.1| 67741 67292 -1 - 450 FIG00544172: hypothetical protein - none -
fig|6666666.67508.peg.1729 CDS gi|356608137|emb|CAFW01000041.1| 68253 67795 -3 - 459 hypothetical protein - none -
fig|6666666.67508.peg.1730 CDS gi|356608137|emb|CAFW01000041.1| 68576 68337 -2 - 240 hypothetical protein - none -
fig|6666666.67508.peg.1731 CDS gi|356608137|emb|CAFW01000041.1| 68857 68594 -1 - 264 Prevent host death protein, Phd antitoxin - none -
fig|6666666.67508.peg.1732 CDS gi|356608137|emb|CAFW01000041.1| 68918 71503 2 + 2586 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.67508.peg.1733 CDS gi|356608137|emb|CAFW01000041.1| 71510 71908 2 + 399 FIG187021: hypothetical protein DNA replication cluster 1
fig|6666666.67508.peg.1734 CDS gi|356608137|emb|CAFW01000041.1| 71963 72100 2 + 138 hypothetical protein - none -
fig|6666666.67508.peg.1735 CDS gi|356608137|emb|CAFW01000041.1| 72457 72855 1 + 399 hypothetical protein - none -
fig|6666666.67508.peg.1736 CDS gi|356608137|emb|CAFW01000041.1| 73040 72870 -2 - 171 hypothetical protein - none -
fig|6666666.67508.peg.1737 CDS gi|356608137|emb|CAFW01000041.1| 73389 73613 3 + 225 hypothetical protein - none -
fig|6666666.67508.peg.1738 CDS gi|356608137|emb|CAFW01000041.1| 74139 73936 -3 - 204 hypothetical protein - none -
fig|6666666.67508.peg.1739 CDS gi|356608137|emb|CAFW01000041.1| 74104 74901 1 + 798 FIG00547443: hypothetical protein - none -
fig|6666666.67508.peg.1740 CDS gi|356608137|emb|CAFW01000041.1| 75035 76477 2 + 1443 D-serine/D-alanine/glycine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.1741 CDS gi|356608137|emb|CAFW01000041.1| 76521 76931 3 + 411 Nudix hydrolase family protein PA3470 Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67508.peg.1742 CDS gi|356608137|emb|CAFW01000041.1| 77194 78855 1 + 1662 putative ABC transporter permease protein - none -
fig|6666666.67508.peg.1743 CDS gi|356608137|emb|CAFW01000041.1| 79120 80121 1 + 1002 hypothetical protein - none -
fig|6666666.67508.peg.1744 CDS gi|356608137|emb|CAFW01000041.1| 80957 80124 -2 - 834 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.67508.peg.1745 CDS gi|356608137|emb|CAFW01000041.1| 81766 80954 -1 - 813 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.67508.peg.1746 CDS gi|356608137|emb|CAFW01000041.1| 82087 83280 1 + 1194 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67508.peg.1747 CDS gi|356608137|emb|CAFW01000041.1| 83306 84208 2 + 903 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67508.peg.1748 CDS gi|356608137|emb|CAFW01000041.1| 85152 84283 -3 - 870 Putative cytoplasmic protein - none -
fig|6666666.67508.peg.1749 CDS gi|356608137|emb|CAFW01000041.1| 85284 85787 3 + 504 Transcriptional regulator, MarR family - none -
fig|6666666.67508.peg.1750 CDS gi|356608137|emb|CAFW01000041.1| 86008 86814 1 + 807 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.67508.peg.1751 CDS gi|356608137|emb|CAFW01000041.1| 88121 86898 -2 - 1224 Chromate transport protein ChrA Resistance to chromium compounds
fig|6666666.67508.peg.1752 CDS gi|356608137|emb|CAFW01000041.1| 88297 88935 1 + 639 hypothetical protein - none -
fig|6666666.67508.peg.1753 CDS gi|356608137|emb|CAFW01000041.1| 90593 88938 -2 - 1656 Exoenzymes regulatory protein AepA precursor - none -
fig|6666666.67508.peg.1754 CDS gi|356608137|emb|CAFW01000041.1| 91943 90594 -2 - 1350 amine oxidase - none -
fig|6666666.67508.peg.1755 CDS gi|356608137|emb|CAFW01000041.1| 93490 92003 -1 - 1488 amino acid permease-associated region - none -
fig|6666666.67508.peg.1756 CDS gi|356608137|emb|CAFW01000041.1| 93707 94297 2 + 591 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1757 CDS gi|356608137|emb|CAFW01000041.1| 94688 95137 2 + 450 Aldo/keto reductase - none -
fig|6666666.67508.peg.1758 CDS gi|356608137|emb|CAFW01000041.1| 95570 95142 -2 - 429 Mobile element protein - none -
fig|6666666.67508.peg.1759 CDS gi|356608137|emb|CAFW01000041.1| 95889 95590 -3 - 300 Transposase - none -
fig|6666666.67508.peg.1760 CDS gi|356608221|emb|CAFW01000040.1| 834 73 -3 - 762 Peptidase S8 and S53, subtilisin, kexin, sedolisin - none -
fig|6666666.67508.peg.1761 CDS gi|356608221|emb|CAFW01000040.1| 1247 831 -2 - 417 hypothetical protein - none -
fig|6666666.67508.peg.1762 CDS gi|356608221|emb|CAFW01000040.1| 2650 2495 -1 - 156 hypothetical protein - none -
fig|6666666.67508.peg.1763 CDS gi|356608221|emb|CAFW01000040.1| 2740 4260 1 + 1521 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.1764 CDS gi|356608221|emb|CAFW01000040.1| 5241 4930 -3 - 312 hypothetical protein - none -
fig|6666666.67508.peg.1765 CDS gi|356608221|emb|CAFW01000040.1| 6115 6885 1 + 771 hypothetical protein - none -
fig|6666666.67508.peg.1766 CDS gi|356608221|emb|CAFW01000040.1| 6993 7121 3 + 129 hypothetical protein - none -
fig|6666666.67508.peg.1767 CDS gi|356608221|emb|CAFW01000040.1| 8560 7205 -1 - 1356 benzoate MFS transporter BenK Benzoate degradation
fig|6666666.67508.peg.1768 CDS gi|356608221|emb|CAFW01000040.1| 11245 10619 -1 - 627 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway;
Serine-glyoxylate cycle
fig|6666666.67508.peg.1769 CDS gi|356608221|emb|CAFW01000040.1| 12009 11266 -3 - 744 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.1770 CDS gi|356608221|emb|CAFW01000040.1| 12100 12876 1 + 777 Pca regulon regulatory protein PcaR Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.1771 CDS gi|356608221|emb|CAFW01000040.1| 12918 14153 3 + 1236 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) - none -
fig|6666666.67508.peg.1772 CDS gi|356608221|emb|CAFW01000040.1| 14160 14969 3 + 810 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Catechol branch of beta-ketoadipate pathway;
Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.1773 CDS gi|356608221|emb|CAFW01000040.1| 16713 14995 -3 - 1719 probable transcriptional regulator - none -
fig|6666666.67508.peg.1774 CDS gi|356608221|emb|CAFW01000040.1| 19675 16832 -1 - 2844 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.67508.peg.1775 CDS gi|356608221|emb|CAFW01000040.1| 19748 20446 2 + 699 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.67508.peg.1776 CDS gi|356608221|emb|CAFW01000040.1| 20488 21144 1 + 657 Uncharacterized protein conserved in bacteria - none -
fig|6666666.67508.peg.1777 CDS gi|356608221|emb|CAFW01000040.1| 22553 21141 -2 - 1413 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.1778 CDS gi|356608221|emb|CAFW01000040.1| 22743 23633 3 + 891 Transcriptional regulator, AraC family - none -
fig|6666666.67508.peg.1779 CDS gi|356608221|emb|CAFW01000040.1| 23670 24782 3 + 1113 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.1780 CDS gi|356608221|emb|CAFW01000040.1| 24958 26841 1 + 1884 FIG01219714: hypothetical protein - none -
fig|6666666.67508.peg.1781 CDS gi|356608221|emb|CAFW01000040.1| 27740 26955 -2 - 786 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-) - none -
fig|6666666.67508.peg.1782 CDS gi|356608221|emb|CAFW01000040.1| 28513 27725 -1 - 789 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) Central meta-cleavage pathway of aromatic compound degradation
fig|6666666.67508.peg.1783 CDS gi|356608221|emb|CAFW01000040.1| 29673 28597 -3 - 1077 Catechol 2,3-dioxygenase (EC 1.13.11.2) Central meta-cleavage pathway of aromatic compound degradation
fig|6666666.67508.peg.1784 CDS gi|356608221|emb|CAFW01000040.1| 31231 29717 -1 - 1515 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) Central meta-cleavage pathway of aromatic compound degradation
fig|6666666.67508.peg.1785 CDS gi|356608221|emb|CAFW01000040.1| 31948 31265 -1 - 684 COG1802: Transcriptional regulators - none -
fig|6666666.67508.peg.1786 CDS gi|356608221|emb|CAFW01000040.1| 33410 31929 -2 - 1482 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) Central meta-cleavage pathway of aromatic compound degradation
fig|6666666.67508.peg.1787 CDS gi|356608221|emb|CAFW01000040.1| 33577 34941 1 + 1365 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67508.peg.1788 CDS gi|356608221|emb|CAFW01000040.1| 35389 37242 1 + 1854 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - none -
fig|6666666.67508.peg.1789 CDS gi|356608221|emb|CAFW01000040.1| 37381 39906 1 + 2526 Phage infection protein - none -
fig|6666666.67508.peg.1790 CDS gi|356608221|emb|CAFW01000040.1| 39906 42071 3 + 2166 hypothetical protein - none -
fig|6666666.67508.peg.1791 CDS gi|356608221|emb|CAFW01000040.1| 42121 42654 1 + 534 ThiJ/PfpI family protein - none -
fig|6666666.67508.peg.1792 CDS gi|356608221|emb|CAFW01000040.1| 43217 42651 -2 - 567 FMN reductase (EC 1.5.1.29) Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67508.peg.1793 CDS gi|356608221|emb|CAFW01000040.1| 44326 43217 -1 - 1110 Luciferase-like monooxygenase (EC 1.14.-.-) - none -
fig|6666666.67508.peg.1794 CDS gi|356608221|emb|CAFW01000040.1| 45597 44509 -3 - 1089 SclB protein - none -
fig|6666666.67508.peg.1795 CDS gi|356608256|emb|CAFW01000039.1| 9 329 3 + 321 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis
fig|6666666.67508.peg.1796 CDS gi|356608256|emb|CAFW01000039.1| 757 353 -1 - 405 FIG00548554: hypothetical protein - none -
fig|6666666.67508.peg.1797 CDS gi|356608256|emb|CAFW01000039.1| 805 2886 1 + 2082 Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Aromatic Amin Catabolism
fig|6666666.67508.peg.1798 CDS gi|356608259|emb|CAFW01000038.1| 1478 453 -2 - 1026 hypothetical protein - none -
fig|6666666.67508.peg.1799 CDS gi|356608259|emb|CAFW01000038.1| 2290 1547 -1 - 744 putative ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.1800 CDS gi|356608259|emb|CAFW01000038.1| 2694 2320 -3 - 375 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.1801 CDS gi|356608259|emb|CAFW01000038.1| 2963 4303 2 + 1341 putative protein (2G313) / putative protein (2G313) - none -
fig|6666666.67508.peg.1802 CDS gi|356608259|emb|CAFW01000038.1| 5369 4455 -2 - 915 FIG00544174: hypothetical protein - none -
fig|6666666.67508.peg.1803 CDS gi|356608259|emb|CAFW01000038.1| 5849 5481 -2 - 369 Thioredoxin - none -
fig|6666666.67508.peg.1804 CDS gi|356608259|emb|CAFW01000038.1| 6010 6210 1 + 201 Copper chaperone Copper homeostasis
fig|6666666.67508.peg.1805 CDS gi|356608259|emb|CAFW01000038.1| 6216 8498 3 + 2283 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.67508.peg.1806 CDS gi|356608259|emb|CAFW01000038.1| 8549 9886 2 + 1338 Niacin transporter NiaP NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.1807 CDS gi|356608259|emb|CAFW01000038.1| 11731 10217 -1 - 1515 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.67508.peg.1808 CDS gi|356608259|emb|CAFW01000038.1| 12704 12252 -2 - 453 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.67508.peg.1809 CDS gi|356608259|emb|CAFW01000038.1| 13358 12765 -2 - 594 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.67508.peg.1810 CDS gi|356608259|emb|CAFW01000038.1| 13703 13413 -2 - 291 SSU ribosomal protein S6p - none -
fig|6666666.67508.peg.1811 CDS gi|356608259|emb|CAFW01000038.1| 14134 13931 -1 - 204 FIG00544411: hypothetical protein - none -
fig|6666666.67508.peg.1812 CDS gi|356608259|emb|CAFW01000038.1| 16355 14208 -2 - 2148 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67508.peg.1813 CDS gi|356608259|emb|CAFW01000038.1| 16891 16511 -1 - 381 FIG00544267: hypothetical protein - none -
fig|6666666.67508.peg.1814 CDS gi|356608259|emb|CAFW01000038.1| 17019 18113 3 + 1095 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.67508.peg.1815 CDS gi|356608259|emb|CAFW01000038.1| 18294 18773 3 + 480 Transcriptional regulator, MarR family - none -
fig|6666666.67508.peg.1816 CDS gi|356608259|emb|CAFW01000038.1| 18835 19779 1 + 945 Universal stress protein family - none -
fig|6666666.67508.peg.1817 CDS gi|356608259|emb|CAFW01000038.1| 19793 20290 2 + 498 hypothetical membrane protein - none -
fig|6666666.67508.peg.1818 CDS gi|356608259|emb|CAFW01000038.1| 21231 20287 -3 - 945 Rhodanese domain protein UPF0176, Actinobacterial subgroup Single-Rhodanese-domain proteins
fig|6666666.67508.peg.1819 CDS gi|356608259|emb|CAFW01000038.1| 22775 21279 -2 - 1497 ATP-dependent Zn protease - none -
fig|6666666.67508.peg.1820 CDS gi|356608259|emb|CAFW01000038.1| 22916 23653 2 + 738 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67508.peg.1821 CDS gi|356608259|emb|CAFW01000038.1| 23641 25104 1 + 1464 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.67508.peg.1822 CDS gi|356608259|emb|CAFW01000038.1| 25855 25085 -1 - 771 alternate gene name: ipa-11d - none -
fig|6666666.67508.peg.1823 CDS gi|356608259|emb|CAFW01000038.1| 26580 25870 -3 - 711 Putative ABC transport system, ATP-binding protein - none -
fig|6666666.67508.peg.1824 CDS gi|356608259|emb|CAFW01000038.1| 27593 26583 -2 - 1011 FIG00545752: hypothetical protein - none -
fig|6666666.67508.peg.1825 CDS gi|356608259|emb|CAFW01000038.1| 27755 28945 2 + 1191 two-component system histidine kinase ChrS - none -
fig|6666666.67508.peg.1826 CDS gi|356608259|emb|CAFW01000038.1| 28946 29566 2 + 621 Hemoglobin-dependent two component system response regulator HrrA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.1827 CDS gi|356608259|emb|CAFW01000038.1| 30102 29563 -3 - 540 FIG00547088: hypothetical protein - none -
fig|6666666.67508.peg.1828 CDS gi|356608259|emb|CAFW01000038.1| 30200 31171 2 + 972 monooxygenase, putative - none -
fig|6666666.67508.peg.1829 CDS gi|356608259|emb|CAFW01000038.1| 32493 31162 -3 - 1332 putative transport protein - none -
fig|6666666.67508.peg.1830 CDS gi|356608259|emb|CAFW01000038.1| 33979 32582 -1 - 1398 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) - none -
fig|6666666.67508.peg.1831 CDS gi|356608259|emb|CAFW01000038.1| 34975 34355 -1 - 621 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1832 CDS gi|356608259|emb|CAFW01000038.1| 35180 35632 2 + 453 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.67508.peg.1833 CDS gi|356608259|emb|CAFW01000038.1| 35779 36762 1 + 984 Phenylacetate-CoA oxygenase, PaaG subunit - none -
fig|6666666.67508.peg.1834 CDS gi|356608259|emb|CAFW01000038.1| 36789 37076 3 + 288 Phenylacetate-CoA oxygenase, PaaH subunit - none -
fig|6666666.67508.peg.1835 CDS gi|356608259|emb|CAFW01000038.1| 37073 37909 2 + 837 Phenylacetate-CoA oxygenase, PaaI subunit - none -
fig|6666666.67508.peg.1836 CDS gi|356608259|emb|CAFW01000038.1| 37925 38494 2 + 570 Phenylacetate-CoA oxygenase, PaaJ subunit - none -
fig|6666666.67508.peg.1837 CDS gi|356608259|emb|CAFW01000038.1| 38494 39645 1 + 1152 Phenylacetate-CoA oxygenase/reductase, PaaK subunit - none -
fig|6666666.67508.peg.1838 CDS gi|356608259|emb|CAFW01000038.1| 39657 40433 3 + 777 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.1839 CDS gi|356608259|emb|CAFW01000038.1| 40505 41716 2 + 1212 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67508.peg.1840 CDS gi|356608259|emb|CAFW01000038.1| 41716 42504 1 + 789 Enoyl-CoA hydratase (EC 4.2.1.17) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.1841 CDS gi|356608259|emb|CAFW01000038.1| 42545 43387 2 + 843 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Acetyl-CoA fermentation to Butyrate;
Butanol Biosynthesis
fig|6666666.67508.peg.1842 CDS gi|356608306|emb|CAFW01000036.1| 2028 523 -3 - 1506 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - none -
fig|6666666.67508.peg.1843 CDS gi|356608306|emb|CAFW01000036.1| 2285 2602 2 + 318 hypothetical protein - none -
fig|6666666.67508.peg.1844 CDS gi|356608306|emb|CAFW01000036.1| 3561 2716 -3 - 846 endonuclease/exonuclease/phosphatase family precursor (38.1 kD) (5F605) - none -
fig|6666666.67508.peg.1845 CDS gi|356608306|emb|CAFW01000036.1| 4154 3558 -2 - 597 HAD-superfamily hydrolase, subfamily IA, variant 3 - none -
fig|6666666.67508.peg.1846 CDS gi|356608306|emb|CAFW01000036.1| 5299 4232 -1 - 1068 Ferric iron ABC transporter, ATP-binding protein - none -
fig|6666666.67508.peg.1847 CDS gi|356608306|emb|CAFW01000036.1| 6242 5286 -2 - 957 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) - none -
fig|6666666.67508.peg.1848 CDS gi|356608306|emb|CAFW01000036.1| 7012 6227 -1 - 786 hypothetical protein - none -
fig|6666666.67508.peg.1849 CDS gi|356608306|emb|CAFW01000036.1| 8242 7109 -1 - 1134 ABC transporter, periplasmic substrate-binding protein - none -
fig|6666666.67508.peg.1850 CDS gi|356608306|emb|CAFW01000036.1| 9271 8513 -1 - 759 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.1851 CDS gi|356608306|emb|CAFW01000036.1| 10602 9322 -3 - 1281 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67508.peg.1852 CDS gi|356608306|emb|CAFW01000036.1| 11039 10764 -2 - 276 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67508.peg.1853 CDS gi|356608306|emb|CAFW01000036.1| 11123 11593 2 + 471 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.67508.peg.1854 CDS gi|356608306|emb|CAFW01000036.1| 11641 12312 1 + 672 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1855 CDS gi|356608306|emb|CAFW01000036.1| 12861 12397 -3 - 465 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) CBSS-176299.4.peg.1292;
Fatty Acid Biosynthesis FASII
fig|6666666.67508.peg.1856 CDS gi|356608306|emb|CAFW01000036.1| 21923 12873 -2 - 9051 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67508.peg.1857 CDS gi|356608306|emb|CAFW01000036.1| 22378 22175 -1 - 204 FIG00546437: hypothetical protein - none -
fig|6666666.67508.peg.1858 CDS gi|356608306|emb|CAFW01000036.1| 22431 23246 3 + 816 putative secreted protein - none -
fig|6666666.67508.peg.1859 CDS gi|356608306|emb|CAFW01000036.1| 23619 24650 3 + 1032 Modification methylase NgoMIV (EC 2.1.1.37) - none -
fig|6666666.67508.peg.1860 CDS gi|356608306|emb|CAFW01000036.1| 24651 25583 3 + 933 Type II restriction enzyme NaeI (EC 3.1.21.4) - none -
fig|6666666.67508.peg.1861 CDS gi|356608306|emb|CAFW01000036.1| 26736 25720 -3 - 1017 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.67508.peg.1862 CDS gi|356608306|emb|CAFW01000036.1| 26714 26827 2 + 114 hypothetical protein - none -
fig|6666666.67508.peg.1863 CDS gi|356608306|emb|CAFW01000036.1| 27373 27008 -1 - 366 hypothetical protein - none -
fig|6666666.67508.peg.1864 CDS gi|356608306|emb|CAFW01000036.1| 28134 28520 3 + 387 PROBABLE CONSERVED LIPOPROTEIN LPRD - none -
fig|6666666.67508.peg.1865 CDS gi|356608306|emb|CAFW01000036.1| 28592 28945 2 + 354 FIG00543835: hypothetical protein - none -
fig|6666666.67508.peg.1866 CDS gi|356608306|emb|CAFW01000036.1| 29641 29027 -1 - 615 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.67508.peg.1867 CDS gi|356608306|emb|CAFW01000036.1| 30375 29647 -3 - 729 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended
fig|6666666.67508.peg.1868 CDS gi|356608306|emb|CAFW01000036.1| 31133 30399 -2 - 735 Metal-dependent hydrolases of the beta-lactamase superfamily III Beta-lactamase
fig|6666666.67508.peg.1869 CDS gi|356608306|emb|CAFW01000036.1| 32047 31274 -1 - 774 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.1870 CDS gi|356608306|emb|CAFW01000036.1| 32719 32048 -1 - 672 FIG00545125: hypothetical protein - none -
fig|6666666.67508.peg.1871 CDS gi|356608306|emb|CAFW01000036.1| 33416 32910 -2 - 507 Transcriptional regulatory protein - none -
fig|6666666.67508.peg.1872 CDS gi|356608306|emb|CAFW01000036.1| 33738 33451 -3 - 288 ATP-dependent Clp protease adaptor protein ClpS Proteolysis in bacteria, ATP-dependent
fig|6666666.67508.peg.1873 CDS gi|356608306|emb|CAFW01000036.1| 33860 34351 2 + 492 FIG00545098: hypothetical protein - none -
fig|6666666.67508.peg.1874 CDS gi|356608306|emb|CAFW01000036.1| 34448 35821 2 + 1374 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.67508.peg.1875 CDS gi|356608306|emb|CAFW01000036.1| 35979 37931 3 + 1953 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.67508.peg.1876 CDS gi|356608306|emb|CAFW01000036.1| 38680 37928 -1 - 753 FIG00546117: hypothetical protein - none -
fig|6666666.67508.peg.1877 CDS gi|356608306|emb|CAFW01000036.1| 39558 38680 -3 - 879 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67508.peg.1878 CDS gi|356608306|emb|CAFW01000036.1| 41351 39654 -2 - 1698 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Terminal cytochrome C oxidases
fig|6666666.67508.peg.1879 CDS gi|356608306|emb|CAFW01000036.1| 42815 41826 -2 - 990 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67508.peg.1880 CDS gi|356608306|emb|CAFW01000036.1| 43185 43898 3 + 714 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.1881 CDS gi|356608306|emb|CAFW01000036.1| 46178 44016 -2 - 2163 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.67508.peg.1882 CDS gi|356608306|emb|CAFW01000036.1| 46706 46272 -2 - 435 Ribonucleotide reduction protein NrdI Ribonucleotide reduction
fig|6666666.67508.peg.1883 CDS gi|356608306|emb|CAFW01000036.1| 47055 46828 -3 - 228 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Glutaredoxins;
Glutathione: Redox cycle;
Ribonucleotide reduction
fig|6666666.67508.peg.1884 CDS gi|356608306|emb|CAFW01000036.1| 47681 47559 -2 - 123 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.67508.peg.1885 CDS gi|356608306|emb|CAFW01000036.1| 49249 47918 -1 - 1332 FIG00544486: hypothetical protein - none -
fig|6666666.67508.peg.1886 CDS gi|356608306|emb|CAFW01000036.1| 49357 50187 1 + 831 NAD synthetase (EC 6.3.1.5) NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.1887 CDS gi|356608306|emb|CAFW01000036.1| 50927 50184 -2 - 744 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.67508.peg.1888 CDS gi|356608306|emb|CAFW01000036.1| 51496 50924 -1 - 573 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.67508.peg.1889 CDS gi|356608306|emb|CAFW01000036.1| 52335 51541 -3 - 795 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67508.peg.1890 CDS gi|356608306|emb|CAFW01000036.1| 53411 52332 -2 - 1080 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) @ ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin;
Siderophore Enterobactin
fig|6666666.67508.peg.1891 CDS gi|356608306|emb|CAFW01000036.1| 54350 53415 -2 - 936 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67508.peg.1892 CDS gi|356608306|emb|CAFW01000036.1| 55451 54486 -2 - 966 Ferrichrome ABC transporter - none -
fig|6666666.67508.peg.1893 CDS gi|356608306|emb|CAFW01000036.1| 55669 56019 1 + 351 hypothetical protein - none -
fig|6666666.67508.peg.1894 CDS gi|356608306|emb|CAFW01000036.1| 56124 57350 3 + 1227 Ferredoxin reductase Anaerobic respiratory reductases
fig|6666666.67508.peg.1895 CDS gi|356608306|emb|CAFW01000036.1| 57543 58022 3 + 480 hypothetical protein - none -
fig|6666666.67508.peg.1896 CDS gi|356608306|emb|CAFW01000036.1| 58067 58606 2 + 540 hypothetical protein - none -
fig|6666666.67508.peg.1897 CDS gi|356608306|emb|CAFW01000036.1| 59253 58930 -3 - 324 POSSIBLE METHYLTRANSFERASE (METHYLASE) (EC 2.1.1.-) - none -
fig|6666666.67508.peg.1898 CDS gi|356608306|emb|CAFW01000036.1| 59611 60984 1 + 1374 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67508.peg.1899 CDS gi|356608306|emb|CAFW01000036.1| 61000 61836 1 + 837 Phosphosulfolactate synthase (EC 4.4.1.19) - none -
fig|6666666.67508.peg.1900 CDS gi|356608306|emb|CAFW01000036.1| 62564 61974 -2 - 591 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.1901 CDS gi|356608306|emb|CAFW01000036.1| 62701 63459 1 + 759 membrane protein, putative - none -
fig|6666666.67508.peg.1902 CDS gi|356608306|emb|CAFW01000036.1| 64458 63730 -3 - 729 FIG00544592: hypothetical protein - none -
fig|6666666.67508.peg.1903 CDS gi|356608306|emb|CAFW01000036.1| 65023 64562 -1 - 462 FIG00544597: hypothetical protein - none -
fig|6666666.67508.peg.1904 CDS gi|356608306|emb|CAFW01000036.1| 66662 65034 -2 - 1629 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.67508.peg.1905 CDS gi|356608306|emb|CAFW01000036.1| 66757 67110 1 + 354 camphor resistance protein CrcB - none -
fig|6666666.67508.peg.1906 CDS gi|356608306|emb|CAFW01000036.1| 67103 67495 2 + 393 hypothetical membrane protein - none -
fig|6666666.67508.peg.1907 CDS gi|356608306|emb|CAFW01000036.1| 70182 67621 -3 - 2562 ABC-type transporter, permease component - none -
fig|6666666.67508.peg.1908 CDS gi|356608306|emb|CAFW01000036.1| 71000 70182 -2 - 819 putative ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.1909 CDS gi|356608306|emb|CAFW01000036.1| 71244 71783 3 + 540 universal stress protein UspA - none -
fig|6666666.67508.peg.1910 CDS gi|356608372|emb|CAFW01000035.1| 2422 1532 -1 - 891 hypothetical protein - none -
fig|6666666.67508.peg.1911 CDS gi|356608372|emb|CAFW01000035.1| 3150 2629 -3 - 522 hypothetical protein - none -
fig|6666666.67508.peg.1912 CDS gi|356608372|emb|CAFW01000035.1| 3923 4048 2 + 126 hypothetical protein - none -
fig|6666666.67508.peg.1913 CDS gi|356608372|emb|CAFW01000035.1| 4168 4752 1 + 585 Plasmid partitioning protein ParA - none -
fig|6666666.67508.peg.1914 CDS gi|356608372|emb|CAFW01000035.1| 4752 4991 3 + 240 hypothetical protein - none -
fig|6666666.67508.peg.1915 CDS gi|356608372|emb|CAFW01000035.1| 5219 5073 -2 - 147 hypothetical protein - none -
fig|6666666.67508.peg.1916 CDS gi|356608378|emb|CAFW01000034.1| 950 6 -2 - 945 Mobile element protein - none -
fig|6666666.67508.peg.1917 CDS gi|356608379|emb|CAFW01000033.1| 964 344 -1 - 621 hypothetical protein - none -
fig|6666666.67508.peg.1918 CDS gi|356608379|emb|CAFW01000033.1| 2350 3243 1 + 894 hypothetical protein - none -
fig|6666666.67508.peg.1919 CDS gi|356608379|emb|CAFW01000033.1| 3484 6066 1 + 2583 hypothetical protein - none -
fig|6666666.67508.peg.1920 CDS gi|356608379|emb|CAFW01000033.1| 7483 6266 -1 - 1218 hypothetical protein - none -
fig|6666666.67508.peg.1921 CDS gi|356608379|emb|CAFW01000033.1| 8508 7480 -3 - 1029 hypothetical protein - none -
fig|6666666.67508.peg.1922 CDS gi|356608379|emb|CAFW01000033.1| 9808 8513 -1 - 1296 TldD protein, part of TldE/TldD proteolytic complex CBSS-316057.3.peg.563
fig|6666666.67508.peg.1923 CDS gi|356608379|emb|CAFW01000033.1| 10058 9822 -2 - 237 hypothetical protein - none -
fig|6666666.67508.peg.1924 CDS gi|356608379|emb|CAFW01000033.1| 11452 10364 -1 - 1089 hypothetical protein - none -
fig|6666666.67508.peg.1925 CDS gi|356608379|emb|CAFW01000033.1| 11656 11537 -1 - 120 hypothetical protein - none -
fig|6666666.67508.peg.1926 CDS gi|356608379|emb|CAFW01000033.1| 12517 13482 1 + 966 oxidoreductase domain protein - none -
fig|6666666.67508.peg.1927 CDS gi|356608379|emb|CAFW01000033.1| 13513 14706 1 + 1194 DegT/DnrJ/EryC1/StrS aminotransferase - none -
fig|6666666.67508.peg.1928 CDS gi|356608379|emb|CAFW01000033.1| 16103 15504 -2 - 600 hypothetical protein - none -
fig|6666666.67508.peg.1929 CDS gi|356608379|emb|CAFW01000033.1| 16657 16238 -1 - 420 Mobile element protein - none -
fig|6666666.67508.peg.1930 CDS gi|356608395|emb|CAFW01000031.1| 975 724 -3 - 252 hypothetical protein - none -
fig|6666666.67508.peg.1931 CDS gi|356608396|emb|CAFW01000030.1| 378 94 -3 - 285 hypothetical protein - none -
fig|6666666.67508.peg.1932 CDS gi|356608396|emb|CAFW01000030.1| 1044 808 -3 - 237 hypothetical protein - none -
fig|6666666.67508.peg.1933 CDS gi|356608399|emb|CAFW01000029.1| 41 583 2 + 543 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.1934 CDS gi|356608399|emb|CAFW01000029.1| 596 3727 2 + 3132 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.67508.peg.1935 CDS gi|356608399|emb|CAFW01000029.1| 3917 5314 2 + 1398 TPR-repeat-containing protein - none -
fig|6666666.67508.peg.1936 CDS gi|356608399|emb|CAFW01000029.1| 5475 6062 3 + 588 hypothetical protein - none -
fig|6666666.67508.peg.1937 CDS gi|356608399|emb|CAFW01000029.1| 8294 6972 -2 - 1323 FIG00545265: hypothetical protein - none -
fig|6666666.67508.peg.1938 CDS gi|356608399|emb|CAFW01000029.1| 8333 9790 2 + 1458 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.67508.peg.1939 CDS gi|356608399|emb|CAFW01000029.1| 10031 10552 2 + 522 Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.1940 CDS gi|356608399|emb|CAFW01000029.1| 10904 10554 -2 - 351 Mobile element protein - none -
fig|6666666.67508.peg.1941 CDS gi|356608406|emb|CAFW01000028.1| 732 397 -3 - 336 hypothetical protein - none -
fig|6666666.67508.peg.1942 CDS gi|356608406|emb|CAFW01000028.1| 986 4249 2 + 3264 hypothetical protein - none -
fig|6666666.67508.peg.1943 CDS gi|356608406|emb|CAFW01000028.1| 4380 4886 3 + 507 DUF1706 domain-containing protein - none -
fig|6666666.67508.peg.1944 CDS gi|356608406|emb|CAFW01000028.1| 5470 6735 1 + 1266 hypothetical protein - none -
fig|6666666.67508.peg.1945 CDS gi|356608406|emb|CAFW01000028.1| 6800 8062 2 + 1263 FIG00547296: hypothetical protein - none -
fig|6666666.67508.peg.1946 CDS gi|356608406|emb|CAFW01000028.1| 9052 8153 -1 - 900 hypothetical protein - none -
fig|6666666.67508.peg.1947 CDS gi|356608406|emb|CAFW01000028.1| 10979 9288 -2 - 1692 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67508.peg.1948 CDS gi|356608406|emb|CAFW01000028.1| 11770 11021 -1 - 750 membrane protein, putative - none -
fig|6666666.67508.peg.1949 CDS gi|356608406|emb|CAFW01000028.1| 11742 11858 3 + 117 hypothetical protein - none -
fig|6666666.67508.peg.1950 CDS gi|356608406|emb|CAFW01000028.1| 12499 11936 -1 - 564 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Niacin-Choline transport and metabolism;
Redox-dependent regulation of nucleus processes
fig|6666666.67508.peg.1951 CDS gi|356608406|emb|CAFW01000028.1| 13948 13073 -1 - 876 Phage protein - none -
fig|6666666.67508.peg.1952 CDS gi|356608406|emb|CAFW01000028.1| 15399 14227 -3 - 1173 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) Bacterial hemoglobins;
Flavohaemoglobin;
Glutaredoxins
fig|6666666.67508.peg.1953 CDS gi|356608406|emb|CAFW01000028.1| 16210 15890 -1 - 321 hypothetical protein - none -
fig|6666666.67508.peg.1954 CDS gi|356608406|emb|CAFW01000028.1| 16719 17522 3 + 804 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.67508.peg.1955 CDS gi|356608406|emb|CAFW01000028.1| 18560 17613 -2 - 948 hypothetical protein - none -
fig|6666666.67508.peg.1956 CDS gi|356608406|emb|CAFW01000028.1| 19028 19567 2 + 540 FIG00544844: hypothetical protein - none -
fig|6666666.67508.peg.1957 CDS gi|356608406|emb|CAFW01000028.1| 20371 19595 -1 - 777 Hypothetical NagD-like phosphatase, Actinobacterial subfamily - none -
fig|6666666.67508.peg.1958 CDS gi|356608406|emb|CAFW01000028.1| 20661 20368 -3 - 294 hypothetical protein - none -
fig|6666666.67508.peg.1959 CDS gi|356608406|emb|CAFW01000028.1| 20696 21721 2 + 1026 Putative alpha/beta hydrolase fold family protein - none -
fig|6666666.67508.peg.1960 CDS gi|356608406|emb|CAFW01000028.1| 21884 22570 2 + 687 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.67508.peg.1961 CDS gi|356608406|emb|CAFW01000028.1| 22567 23721 1 + 1155 Glycine oxidase ThiO (EC 1.4.3.19) Thiamin biosynthesis
fig|6666666.67508.peg.1962 CDS gi|356608406|emb|CAFW01000028.1| 23731 23928 1 + 198 Sulfur carrier protein ThiS @ Opine oxidase subunit C Thiamin biosynthesis
fig|6666666.67508.peg.1963 CDS gi|356608406|emb|CAFW01000028.1| 23931 24713 3 + 783 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.67508.peg.1964 CDS gi|356608406|emb|CAFW01000028.1| 24714 25838 3 + 1125 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.67508.peg.1965 CDS gi|356608406|emb|CAFW01000028.1| 26676 25891 -3 - 786 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.1966 CDS gi|356608406|emb|CAFW01000028.1| 30356 27594 -2 - 2763 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.1967 CDS gi|356608406|emb|CAFW01000028.1| 30642 31061 3 + 420 FIG00544601: hypothetical protein - none -
fig|6666666.67508.peg.1968 CDS gi|356608406|emb|CAFW01000028.1| 32115 31363 -3 - 753 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.67508.peg.1969 CDS gi|356608406|emb|CAFW01000028.1| 32974 32102 -1 - 873 Possible integral membrane protein - none -
fig|6666666.67508.peg.1970 CDS gi|356608406|emb|CAFW01000028.1| 36435 33019 -3 - 3417 hypothetical protein - none -
fig|6666666.67508.peg.1971 CDS gi|356608406|emb|CAFW01000028.1| 36683 37498 2 + 816 Putative phosphotransferase system protein - none -
fig|6666666.67508.peg.1972 CDS gi|356608406|emb|CAFW01000028.1| 37540 39135 1 + 1596 Putative integral membrane protein - none -
fig|6666666.67508.peg.1973 CDS gi|356608406|emb|CAFW01000028.1| 40319 39264 -2 - 1056 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion Biogenesis of cytochrome c oxidases;
CBSS-316057.3.peg.563
fig|6666666.67508.peg.1974 CDS gi|356608406|emb|CAFW01000028.1| 40753 40331 -1 - 423 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.67508.peg.1975 CDS gi|356608406|emb|CAFW01000028.1| 40931 42085 2 + 1155 FIG042796: Hypothetical protein CBSS-100226.1.peg.2266;
CBSS-349161.4.peg.2417
fig|6666666.67508.peg.1976 CDS gi|356608406|emb|CAFW01000028.1| 42136 42861 1 + 726 FIG137478: Hypothetical protein CBSS-100226.1.peg.2266
fig|6666666.67508.peg.1977 CDS gi|356608406|emb|CAFW01000028.1| 42898 44073 1 + 1176 FIG006762: Phosphoglycerate mutase family CBSS-100226.1.peg.2266
fig|6666666.67508.peg.1978 CDS gi|356608406|emb|CAFW01000028.1| 44543 45943 2 + 1401 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.67508.peg.1979 CDS gi|356608406|emb|CAFW01000028.1| 47061 45955 -3 - 1107 hypothetical protein - none -
fig|6666666.67508.peg.1980 CDS gi|356608406|emb|CAFW01000028.1| 47429 47184 -2 - 246 hypothetical protein - none -
fig|6666666.67508.peg.1981 CDS gi|356608406|emb|CAFW01000028.1| 49011 47728 -3 - 1284 Galactokinase (EC 2.7.1.6) - none -
fig|6666666.67508.peg.1982 CDS gi|356608406|emb|CAFW01000028.1| 49172 49384 2 + 213 FIG00544054: hypothetical protein - none -
fig|6666666.67508.peg.1983 CDS gi|356608406|emb|CAFW01000028.1| 51300 49486 -3 - 1815 Chaperonin GroEL (HSP60 family) - none -
fig|6666666.67508.peg.1984 CDS gi|356608406|emb|CAFW01000028.1| 52546 51431 -1 - 1116 FIG00544769: hypothetical protein - none -
fig|6666666.67508.peg.1985 CDS gi|356608448|emb|CAFW01000027.1| 144 16 -3 - 129 hypothetical protein - none -
fig|6666666.67508.peg.1986 CDS gi|356608448|emb|CAFW01000027.1| 210 416 3 + 207 hypothetical protein - none -
fig|6666666.67508.peg.1987 CDS gi|356608448|emb|CAFW01000027.1| 454 798 1 + 345 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1988 CDS gi|356608448|emb|CAFW01000027.1| 1031 1783 2 + 753 Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis - none -
fig|6666666.67508.peg.1989 CDS gi|356608448|emb|CAFW01000027.1| 1811 2779 2 + 969 Sulfate transporter, CysZ-type Cysteine Biosynthesis;
Inorganic Sulfur Assimilation
fig|6666666.67508.peg.1990 CDS gi|356608448|emb|CAFW01000027.1| 3538 2783 -1 - 756 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.1991 CDS gi|356608448|emb|CAFW01000027.1| 3593 4615 2 + 1023 FIG00545059: hypothetical protein - none -
fig|6666666.67508.peg.1992 CDS gi|356608448|emb|CAFW01000027.1| 4615 5850 1 + 1236 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.67508.peg.1993 CDS gi|356608448|emb|CAFW01000027.1| 6632 5847 -2 - 786 FIG00544185: hypothetical protein - none -
fig|6666666.67508.peg.1994 CDS gi|356608448|emb|CAFW01000027.1| 6962 7315 2 + 354 FIG00544092: hypothetical protein - none -
fig|6666666.67508.peg.1995 CDS gi|356608448|emb|CAFW01000027.1| 7315 7929 1 + 615 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.67508.peg.1996 CDS gi|356608448|emb|CAFW01000027.1| 7932 8630 3 + 699 DNA-binding response regulator mtrA - none -
fig|6666666.67508.peg.1997 CDS gi|356608448|emb|CAFW01000027.1| 8714 10261 2 + 1548 Putative two component system sensor kinase - none -
fig|6666666.67508.peg.1998 CDS gi|356608448|emb|CAFW01000027.1| 10258 11949 1 + 1692 LpqB - none -
fig|6666666.67508.peg.1999 CDS gi|356608448|emb|CAFW01000027.1| 12049 12555 1 + 507 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.67508.peg.2000 CDS gi|356608448|emb|CAFW01000027.1| 12696 13361 3 + 666 Ribosomal subunit interface protein Ribosome activity modulation
fig|6666666.67508.peg.2001 CDS gi|356608448|emb|CAFW01000027.1| 13513 16059 1 + 2547 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.67508.peg.2002 CDS gi|356608448|emb|CAFW01000027.1| 16424 16071 -2 - 354 hypothetical protein - none -
fig|6666666.67508.peg.2003 CDS gi|356608448|emb|CAFW01000027.1| 16575 16985 3 + 411 FIG00996758: hypothetical protein - none -
fig|6666666.67508.peg.2004 CDS gi|356608448|emb|CAFW01000027.1| 16987 17493 1 + 507 FIG00544397: hypothetical protein - none -
fig|6666666.67508.peg.2005 CDS gi|356608448|emb|CAFW01000027.1| 18495 17506 -3 - 990 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.67508.peg.2006 CDS gi|356608448|emb|CAFW01000027.1| 19729 18488 -1 - 1242 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.2007 CDS gi|356608448|emb|CAFW01000027.1| 19916 20422 2 + 507 FIG00543821: hypothetical protein - none -
fig|6666666.67508.peg.2008 CDS gi|356608448|emb|CAFW01000027.1| 20870 20391 -2 - 480 Cys-tRNA(Pro) deacylase YbaK - none -
fig|6666666.67508.peg.2009 CDS gi|356608448|emb|CAFW01000027.1| 20919 21491 3 + 573 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.67508.peg.2010 CDS gi|356608448|emb|CAFW01000027.1| 21730 21605 -1 - 126 hypothetical protein - none -
fig|6666666.67508.peg.2011 CDS gi|356608448|emb|CAFW01000027.1| 22452 22192 -3 - 261 WhiB-like transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67508.peg.2012 CDS gi|356608448|emb|CAFW01000027.1| 22721 23368 2 + 648 FIG00543921: hypothetical protein - none -
fig|6666666.67508.peg.2013 CDS gi|356608448|emb|CAFW01000027.1| 24596 23358 -2 - 1239 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Possible new toxin-antitoxin system including DivIC;
Stationary phase repair cluster
fig|6666666.67508.peg.2014 CDS gi|356608448|emb|CAFW01000027.1| 25864 24593 -1 - 1272 putative ATP-dependent RNA helicase - none -
fig|6666666.67508.peg.2015 CDS gi|356608448|emb|CAFW01000027.1| 25929 26153 3 + 225 FIG00543928: hypothetical protein - none -
fig|6666666.67508.peg.2016 CDS gi|356608448|emb|CAFW01000027.1| 26175 27125 3 + 951 FIG00544386: hypothetical protein - none -
fig|6666666.67508.peg.2017 CDS gi|356608448|emb|CAFW01000027.1| 27138 27914 3 + 777 FIG00544868: hypothetical protein - none -
fig|6666666.67508.peg.2018 CDS gi|356608448|emb|CAFW01000027.1| 27911 31075 2 + 3165 ATP-dependent DNA helicase SCO5183 DNA repair, bacterial RecBCD pathway
fig|6666666.67508.peg.2019 CDS gi|356608448|emb|CAFW01000027.1| 31062 34295 3 + 3234 ATP-dependent DNA helicase SCO5184 DNA repair, bacterial RecBCD pathway
fig|6666666.67508.peg.2020 CDS gi|356608448|emb|CAFW01000027.1| 34512 35459 3 + 948 Potassium channel protein Potassium homeostasis
fig|6666666.67508.peg.2021 CDS gi|356608448|emb|CAFW01000027.1| 35463 36191 3 + 729 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67508.peg.2022 CDS gi|356608448|emb|CAFW01000027.1| 36188 38266 2 + 2079 ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog DNA repair, bacterial UvrD and related helicases
fig|6666666.67508.peg.2023 CDS gi|356608448|emb|CAFW01000027.1| 39157 38291 -1 - 867 FIG00544187: hypothetical protein - none -
fig|6666666.67508.peg.2024 CDS gi|356608448|emb|CAFW01000027.1| 39225 39755 3 + 531 Zinc metalloprotease (EC 3.4.24.-) - none -
fig|6666666.67508.peg.2025 CDS gi|356608448|emb|CAFW01000027.1| 41222 39756 -2 - 1467 Collagen alpha 1(I) chain precursor - none -
fig|6666666.67508.peg.2026 CDS gi|356608448|emb|CAFW01000027.1| 41343 42371 3 + 1029 Lon-like protease with PDZ domain - none -
fig|6666666.67508.peg.2027 CDS gi|356608448|emb|CAFW01000027.1| 43127 42462 -2 - 666 FIG00544133: hypothetical protein - none -
fig|6666666.67508.peg.2028 CDS gi|356608448|emb|CAFW01000027.1| 43717 43187 -1 - 531 FIG129854: hypothetical protein - none -
fig|6666666.67508.peg.2029 CDS gi|356608448|emb|CAFW01000027.1| 43872 46820 3 + 2949 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.67508.peg.2030 CDS gi|356608448|emb|CAFW01000027.1| 47482 47261 -1 - 222 Mobile element protein - none -
fig|6666666.67508.peg.2031 CDS gi|356608493|emb|CAFW01000026.1| 133 1560 1 + 1428 hypothetical protein - none -
fig|6666666.67508.peg.2032 CDS gi|356608495|emb|CAFW01000025.1| 9 827 3 + 819 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.67508.peg.2033 CDS gi|356608495|emb|CAFW01000025.1| 1651 911 -1 - 741 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.2034 CDS gi|356608495|emb|CAFW01000025.1| 1980 2285 3 + 306 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67508.peg.2035 CDS gi|356608495|emb|CAFW01000025.1| 2316 5042 3 + 2727 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.67508.peg.2036 CDS gi|356608495|emb|CAFW01000025.1| 5386 7104 1 + 1719 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.67508.peg.2037 CDS gi|356608495|emb|CAFW01000025.1| 7101 7544 3 + 444 Putative membrane protein - none -
fig|6666666.67508.peg.2038 CDS gi|356608495|emb|CAFW01000025.1| 7548 7874 3 + 327 hypothetical protein - none -
fig|6666666.67508.peg.2039 CDS gi|356608495|emb|CAFW01000025.1| 7923 8333 3 + 411 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.67508.peg.2040 CDS gi|356608495|emb|CAFW01000025.1| 9296 8454 -2 - 843 FIG00545459: hypothetical protein - none -
fig|6666666.67508.peg.2041 CDS gi|356608495|emb|CAFW01000025.1| 9569 13753 2 + 4185 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial
fig|6666666.67508.peg.2042 CDS gi|356608495|emb|CAFW01000025.1| 14109 14414 3 + 306 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67508.peg.2043 CDS gi|356608495|emb|CAFW01000025.1| 14451 14729 3 + 279 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.67508.peg.2044 CDS gi|356608495|emb|CAFW01000025.1| 14859 16388 3 + 1530 COG0536: GTP-binding protein Obg - none -
fig|6666666.67508.peg.2045 CDS gi|356608495|emb|CAFW01000025.1| 16398 17555 3 + 1158 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.67508.peg.2046 CDS gi|356608495|emb|CAFW01000025.1| 17647 18546 1 + 900 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67508.peg.2047 CDS gi|356608495|emb|CAFW01000025.1| 18550 19476 1 + 927 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.67508.peg.2048 CDS gi|356608495|emb|CAFW01000025.1| 19610 19497 -2 - 114 hypothetical protein - none -
fig|6666666.67508.peg.2049 CDS gi|356608495|emb|CAFW01000025.1| 20535 19747 -3 - 789 Transcriptional regulator, DeoR family - none -
fig|6666666.67508.peg.2050 CDS gi|356608495|emb|CAFW01000025.1| 20702 20580 -2 - 123 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67508.peg.2051 CDS gi|356608495|emb|CAFW01000025.1| 20694 20855 3 + 162 hypothetical protein - none -
fig|6666666.67508.peg.2052 CDS gi|356608495|emb|CAFW01000025.1| 20998 21585 1 + 588 FIG00544916: hypothetical protein - none -
fig|6666666.67508.peg.2053 CDS gi|356608495|emb|CAFW01000025.1| 21666 22976 3 + 1311 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.67508.peg.2054 CDS gi|356608495|emb|CAFW01000025.1| 23076 23987 3 + 912 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.67508.peg.2055 CDS gi|356608495|emb|CAFW01000025.1| 24552 24082 -3 - 471 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.2056 CDS gi|356608495|emb|CAFW01000025.1| 24629 25840 2 + 1212 hypothetical protein - none -
fig|6666666.67508.peg.2057 CDS gi|356608495|emb|CAFW01000025.1| 27272 25875 -2 - 1398 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67508.peg.2058 CDS gi|356608495|emb|CAFW01000025.1| 27646 27386 -1 - 261 hypothetical protein - none -
fig|6666666.67508.peg.2059 CDS gi|356608495|emb|CAFW01000025.1| 27931 27689 -1 - 243 hypothetical protein - none -
fig|6666666.67508.peg.2060 CDS gi|356608495|emb|CAFW01000025.1| 28852 27965 -1 - 888 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.67508.peg.2061 CDS gi|356608495|emb|CAFW01000025.1| 29677 28919 -1 - 759 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.2062 CDS gi|356608495|emb|CAFW01000025.1| 30160 30804 1 + 645 hypothetical protein - none -
fig|6666666.67508.peg.2063 CDS gi|356608495|emb|CAFW01000025.1| 32405 30930 -2 - 1476 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67508.peg.2064 CDS gi|356608495|emb|CAFW01000025.1| 33243 32509 -3 - 735 FIG00545345: hypothetical protein - none -
fig|6666666.67508.peg.2065 CDS gi|356608495|emb|CAFW01000025.1| 33708 34373 3 + 666 hypothetical protein - none -
fig|6666666.67508.peg.2066 CDS gi|356608495|emb|CAFW01000025.1| 35114 34398 -2 - 717 FIG00545912: hypothetical protein - none -
fig|6666666.67508.peg.2067 CDS gi|356608495|emb|CAFW01000025.1| 36862 35201 -1 - 1662 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.67508.peg.2068 CDS gi|356608495|emb|CAFW01000025.1| 37087 38028 1 + 942 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL dTDP-rhamnose synthesis
fig|6666666.67508.peg.2069 CDS gi|356608495|emb|CAFW01000025.1| 38153 39292 2 + 1140 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) Mannose Metabolism
fig|6666666.67508.peg.2070 CDS gi|356608495|emb|CAFW01000025.1| 39753 40052 3 + 300 Sporulation regulatory protein WhiB WhiB and WhiB-type regulatory proteins
fig|6666666.67508.peg.2071 CDS gi|356608495|emb|CAFW01000025.1| 40578 40174 -3 - 405 FIG00544777: hypothetical protein - none -
fig|6666666.67508.peg.2072 CDS gi|356608495|emb|CAFW01000025.1| 40861 41214 1 + 354 FIG00543823: hypothetical protein - none -
fig|6666666.67508.peg.2073 CDS gi|356608495|emb|CAFW01000025.1| 41304 42671 3 + 1368 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.67508.peg.2074 CDS gi|356608495|emb|CAFW01000025.1| 42914 44272 2 + 1359 Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1) Inorganic Sulfur Assimilation
fig|6666666.67508.peg.2075 CDS gi|356608533|emb|CAFW01000024.1| 958 2187 1 + 1230 putative lipoprotein - none -
fig|6666666.67508.peg.2076 CDS gi|356608533|emb|CAFW01000024.1| 2241 3206 3 + 966 FIG00544715: hypothetical protein - none -
fig|6666666.67508.peg.2077 CDS gi|356608533|emb|CAFW01000024.1| 4244 3210 -2 - 1035 Integral membrane protein - none -
fig|6666666.67508.peg.2078 CDS gi|356608533|emb|CAFW01000024.1| 5783 4245 -2 - 1539 Predicted nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.67508.peg.2079 CDS gi|356608533|emb|CAFW01000024.1| 7413 5854 -3 - 1560 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) DNA repair, bacterial photolyase;
EC699-706
fig|6666666.67508.peg.2080 CDS gi|356608533|emb|CAFW01000024.1| 7615 8211 1 + 597 FIG00547498: hypothetical protein - none -
fig|6666666.67508.peg.2081 CDS gi|356608533|emb|CAFW01000024.1| 9336 8689 -3 - 648 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.67508.peg.2082 CDS gi|356608533|emb|CAFW01000024.1| 9595 11145 1 + 1551 sodium/alanine symporter family protein - none -
fig|6666666.67508.peg.2083 CDS gi|356608533|emb|CAFW01000024.1| 12088 11288 -1 - 801 Short-chain dehydrogenase/reductase SDR Transcription repair cluster
fig|6666666.67508.peg.2084 CDS gi|356608533|emb|CAFW01000024.1| 12300 13391 3 + 1092 NAD(P)H-dependent 2-cyclohexen-1-one reductase - none -
fig|6666666.67508.peg.2085 CDS gi|356608533|emb|CAFW01000024.1| 14125 13424 -1 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.67508.peg.2086 CDS gi|356608533|emb|CAFW01000024.1| 15132 14188 -3 - 945 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.67508.peg.2087 CDS gi|356608533|emb|CAFW01000024.1| 15238 16425 1 + 1188 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.67508.peg.2088 CDS gi|356608533|emb|CAFW01000024.1| 16537 17457 1 + 921 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67508.peg.2089 CDS gi|356608533|emb|CAFW01000024.1| 18262 17540 -1 - 723 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.2090 CDS gi|356608533|emb|CAFW01000024.1| 18822 20408 3 + 1587 Putative transport system secreted protein - none -
fig|6666666.67508.peg.2091 CDS gi|356608533|emb|CAFW01000024.1| 20514 21461 3 + 948 ABC-type transporter, permease component - none -
fig|6666666.67508.peg.2092 CDS gi|356608533|emb|CAFW01000024.1| 21465 23522 3 + 2058 FIG00544816: hypothetical protein - none -
fig|6666666.67508.peg.2093 CDS gi|356608533|emb|CAFW01000024.1| 23526 24359 3 + 834 FIG00547092: hypothetical protein - none -
fig|6666666.67508.peg.2094 CDS gi|356608533|emb|CAFW01000024.1| 24377 26113 2 + 1737 hypothetical protein - none -
fig|6666666.67508.peg.2095 CDS gi|356608533|emb|CAFW01000024.1| 26532 28505 3 + 1974 Copper resistance protein D Copper homeostasis
fig|6666666.67508.peg.2096 CDS gi|356608533|emb|CAFW01000024.1| 28740 29315 3 + 576 Putative single-strand binding protein - none -
fig|6666666.67508.peg.2097 CDS gi|356608533|emb|CAFW01000024.1| 29510 31180 2 + 1671 ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.2098 CDS gi|356608533|emb|CAFW01000024.1| 31363 31845 1 + 483 FIG00544139: hypothetical protein - none -
fig|6666666.67508.peg.2099 CDS gi|356608533|emb|CAFW01000024.1| 31931 32605 2 + 675 FIG00545013: hypothetical protein - none -
fig|6666666.67508.peg.2100 CDS gi|356608533|emb|CAFW01000024.1| 33713 32670 -2 - 1044 hypothetical protein - none -
fig|6666666.67508.peg.2101 CDS gi|356608533|emb|CAFW01000024.1| 34099 34236 1 + 138 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.2102 CDS gi|356608533|emb|CAFW01000024.1| 34267 35184 1 + 918 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.2103 CDS gi|356608533|emb|CAFW01000024.1| 35668 35276 -1 - 393 Hemoglobin-like protein HbO Bacterial hemoglobins
fig|6666666.67508.peg.2104 CDS gi|356608533|emb|CAFW01000024.1| 36725 35676 -2 - 1050 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.67508.peg.2105 CDS gi|356608533|emb|CAFW01000024.1| 37148 38311 2 + 1164 Cystathionine gamma-lyase (EC 4.4.1.1) Cysteine Biosynthesis;
Glycine and Serine Utilization;
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.2106 CDS gi|356608533|emb|CAFW01000024.1| 38390 39091 2 + 702 short-chain dehydrogenase/reductase SDR - none -
fig|6666666.67508.peg.2107 CDS gi|356608533|emb|CAFW01000024.1| 39126 39488 3 + 363 hypothetical protein - none -
fig|6666666.67508.peg.2108 CDS gi|356608533|emb|CAFW01000024.1| 42000 39472 -3 - 2529 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.67508.peg.2109 CDS gi|356608533|emb|CAFW01000024.1| 42091 42714 1 + 624 FIG00544229: hypothetical protein - none -
fig|6666666.67508.peg.2110 CDS gi|356608533|emb|CAFW01000024.1| 42763 43245 1 + 483 Ribose 5-phosphate isomerase B (EC 5.3.1.6) / Galactose 6-phosphate isomerase D-ribose utilization;
Pentose phosphate pathway
fig|6666666.67508.peg.2111 CDS gi|356608533|emb|CAFW01000024.1| 44215 43346 -1 - 870 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67508.peg.2112 CDS gi|356608533|emb|CAFW01000024.1| 45159 44329 -3 - 831 FIG00997919: hypothetical protein - none -
fig|6666666.67508.peg.2113 CDS gi|356608533|emb|CAFW01000024.1| 45756 45595 -3 - 162 hypothetical protein - none -
fig|6666666.67508.peg.2114 CDS gi|356608533|emb|CAFW01000024.1| 46643 45759 -2 - 885 hypothetical protein - none -
fig|6666666.67508.peg.2115 CDS gi|356608533|emb|CAFW01000024.1| 47245 48612 1 + 1368 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.67508.peg.2116 CDS gi|356608533|emb|CAFW01000024.1| 48924 49523 3 + 600 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67508.peg.2117 CDS gi|356608533|emb|CAFW01000024.1| 49545 50168 3 + 624 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.67508.peg.2118 CDS gi|356608533|emb|CAFW01000024.1| 50632 52176 1 + 1545 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.67508.peg.2119 CDS gi|356608574|emb|CAFW01000023.1| 876 688 -3 - 189 hypothetical protein - none -
fig|6666666.67508.peg.2120 CDS gi|356608575|emb|CAFW01000022.1| 2 352 2 + 351 Mobile element protein - none -
fig|6666666.67508.peg.2121 CDS gi|356608575|emb|CAFW01000022.1| 779 354 -2 - 426 Mobile element protein - none -
fig|6666666.67508.peg.2122 CDS gi|356608575|emb|CAFW01000022.1| 1315 902 -1 - 414 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67508.peg.2123 CDS gi|356608576|emb|CAFW01000021.1| 1009 2175 1 + 1167 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67508.peg.2124 CDS gi|356608576|emb|CAFW01000021.1| 2331 3584 3 + 1254 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.67508.peg.2125 CDS gi|356608576|emb|CAFW01000021.1| 3846 3658 -3 - 189 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.67508.peg.2126 CDS gi|356608576|emb|CAFW01000021.1| 4783 4019 -1 - 765 Mobile element protein - none -
fig|6666666.67508.peg.2127 CDS gi|356608576|emb|CAFW01000021.1| 5916 4789 -3 - 1128 Mobile element protein - none -
fig|6666666.67508.peg.2128 CDS gi|356608576|emb|CAFW01000021.1| 6046 6330 1 + 285 hypothetical protein - none -
fig|6666666.67508.peg.2129 CDS gi|356608582|emb|CAFW01000020.1| 387 103 -3 - 285 hypothetical protein - none -
fig|6666666.67508.peg.2130 CDS gi|356608582|emb|CAFW01000020.1| 701 2344 2 + 1644 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.67508.peg.2131 CDS gi|356608582|emb|CAFW01000020.1| 4005 2464 -3 - 1542 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67508.peg.2132 CDS gi|356608582|emb|CAFW01000020.1| 8711 4005 -2 - 4707 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67508.peg.2133 CDS gi|356608582|emb|CAFW01000020.1| 10256 8820 -2 - 1437 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.2134 CDS gi|356608582|emb|CAFW01000020.1| 10821 11804 3 + 984 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.67508.peg.2135 CDS gi|356608582|emb|CAFW01000020.1| 11890 12114 1 + 225 hypothetical protein - none -
fig|6666666.67508.peg.2136 CDS gi|356608582|emb|CAFW01000020.1| 12447 12097 -3 - 351 Mobile element protein - none -
fig|6666666.67508.peg.2137 CDS gi|356608590|emb|CAFW01000019.1| 246 467 3 + 222 Mobile element protein - none -
fig|6666666.67508.peg.2138 CDS gi|356608590|emb|CAFW01000019.1| 525 1826 3 + 1302 hypothetical protein - none -
fig|6666666.67508.peg.2139 CDS gi|356608590|emb|CAFW01000019.1| 1974 2390 3 + 417 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.67508.peg.2140 CDS gi|356608590|emb|CAFW01000019.1| 2394 3215 3 + 822 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.67508.peg.2141 CDS gi|356608590|emb|CAFW01000019.1| 3258 3911 3 + 654 Potassium uptake protein, integral membrane component, KtrA - none -
fig|6666666.67508.peg.2142 CDS gi|356608590|emb|CAFW01000019.1| 8406 5038 -3 - 3369 hypothetical protein - none -
fig|6666666.67508.peg.2143 CDS gi|356608590|emb|CAFW01000019.1| 9649 8393 -1 - 1257 hypothetical protein - none -
fig|6666666.67508.peg.2144 CDS gi|356608590|emb|CAFW01000019.1| 11052 9652 -3 - 1401 hypothetical protein - none -
fig|6666666.67508.peg.2145 CDS gi|356608590|emb|CAFW01000019.1| 11552 11019 -2 - 534 hypothetical protein - none -
fig|6666666.67508.peg.2146 CDS gi|356608590|emb|CAFW01000019.1| 12076 11951 -1 - 126 hypothetical protein - none -
fig|6666666.67508.peg.2147 CDS gi|356608590|emb|CAFW01000019.1| 12368 13525 2 + 1158 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67508.peg.2148 CDS gi|356608590|emb|CAFW01000019.1| 13579 15021 1 + 1443 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.2149 CDS gi|356608590|emb|CAFW01000019.1| 15211 15774 1 + 564 Putative phage protein - none -
fig|6666666.67508.peg.2150 CDS gi|356608590|emb|CAFW01000019.1| 16841 16464 -2 - 378 hypothetical protein - none -
fig|6666666.67508.peg.2151 CDS gi|356608590|emb|CAFW01000019.1| 17368 16829 -1 - 540 hypothetical protein - none -
fig|6666666.67508.peg.2152 CDS gi|356608590|emb|CAFW01000019.1| 17812 17961 1 + 150 hypothetical protein - none -
fig|6666666.67508.peg.2153 CDS gi|356608590|emb|CAFW01000019.1| 18478 18095 -1 - 384 hypothetical protein - none -
fig|6666666.67508.peg.2154 CDS gi|356608590|emb|CAFW01000019.1| 18512 18634 2 + 123 hypothetical protein - none -
fig|6666666.67508.peg.2155 CDS gi|356608590|emb|CAFW01000019.1| 18856 19029 1 + 174 hypothetical protein - none -
fig|6666666.67508.peg.2156 CDS gi|356608590|emb|CAFW01000019.1| 21449 19161 -2 - 2289 hypothetical protein - none -
fig|6666666.67508.peg.2157 CDS gi|356608590|emb|CAFW01000019.1| 21574 21858 1 + 285 Mobile element protein - none -
fig|6666666.67508.peg.2158 CDS gi|356608604|emb|CAFW01000018.1| 411 103 -3 - 309 Mobile element protein - none -
fig|6666666.67508.peg.2159 CDS gi|356608604|emb|CAFW01000018.1| 1845 814 -3 - 1032 Periplasmic binding protein - none -
fig|6666666.67508.peg.2160 CDS gi|356608604|emb|CAFW01000018.1| 3596 1842 -2 - 1755 hypothetical protein - none -
fig|6666666.67508.peg.2161 CDS gi|356608604|emb|CAFW01000018.1| 5341 3593 -1 - 1749 hypothetical protein - none -
fig|6666666.67508.peg.2162 CDS gi|356608604|emb|CAFW01000018.1| 7127 5352 -2 - 1776 iron-chelator utilization protein - none -
fig|6666666.67508.peg.2163 CDS gi|356608604|emb|CAFW01000018.1| 8041 7154 -1 - 888 ABC-type Fe3+-siderophore transport system, ATPase component - none -
fig|6666666.67508.peg.2164 CDS gi|356608604|emb|CAFW01000018.1| 9139 8063 -1 - 1077 ABC-type Fe3+-siderophore transport system, permease 2 component Flavohaemoglobin
fig|6666666.67508.peg.2165 CDS gi|356608604|emb|CAFW01000018.1| 10215 9145 -3 - 1071 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67508.peg.2166 CDS gi|356608604|emb|CAFW01000018.1| 10507 11292 1 + 786 Transcriptional regulator, AraC family - none -
fig|6666666.67508.peg.2167 CDS gi|356608604|emb|CAFW01000018.1| 12710 11289 -2 - 1422 Phytoene dehydrogenase and related proteins - none -
fig|6666666.67508.peg.2168 CDS gi|356608604|emb|CAFW01000018.1| 14111 12876 -2 - 1236 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67508.peg.2169 CDS gi|356608604|emb|CAFW01000018.1| 15453 14125 -3 - 1329 integral membrane transporter - none -
fig|6666666.67508.peg.2170 CDS gi|356608604|emb|CAFW01000018.1| 16879 15563 -1 - 1317 two component sensor kinase - none -
fig|6666666.67508.peg.2171 CDS gi|356608604|emb|CAFW01000018.1| 17646 17038 -3 - 609 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.2172 CDS gi|356608604|emb|CAFW01000018.1| 17792 19453 2 + 1662 Permeases of the major facilitator superfamily - none -
fig|6666666.67508.peg.2173 CDS gi|356608604|emb|CAFW01000018.1| 19822 19472 -1 - 351 hypothetical protein - none -
fig|6666666.67508.peg.2174 CDS gi|356608621|emb|CAFW01000017.1| 331 23 -1 - 309 Mobile element protein - none -
fig|6666666.67508.peg.2175 CDS gi|356608621|emb|CAFW01000017.1| 478 1431 1 + 954 hypothetical protein - none -
fig|6666666.67508.peg.2176 CDS gi|356608621|emb|CAFW01000017.1| 2741 1581 -2 - 1161 Mobile element protein - none -
fig|6666666.67508.peg.2177 CDS gi|356608621|emb|CAFW01000017.1| 3444 2761 -3 - 684 Transcriptional regulator, TetR family - none -
fig|6666666.67508.peg.2178 CDS gi|356608621|emb|CAFW01000017.1| 4377 3535 -3 - 843 hypothetical protein - none -
fig|6666666.67508.peg.2179 CDS gi|356608621|emb|CAFW01000017.1| 4540 5433 1 + 894 ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.2180 CDS gi|356608621|emb|CAFW01000017.1| 5430 7169 3 + 1740 hypothetical protein - none -
fig|6666666.67508.peg.2181 CDS gi|356608621|emb|CAFW01000017.1| 7255 8517 1 + 1263 transporter, putative - none -
fig|6666666.67508.peg.2182 CDS gi|356608621|emb|CAFW01000017.1| 8468 9070 2 + 603 Streptococcal phospholipase A2; _Toximoron (Other) - none -
fig|6666666.67508.peg.2183 CDS gi|356608621|emb|CAFW01000017.1| 9230 9376 2 + 147 hypothetical protein - none -
fig|6666666.67508.peg.2184 CDS gi|356608621|emb|CAFW01000017.1| 9704 10330 2 + 627 site-specific recombinase - none -
fig|6666666.67508.peg.2185 CDS gi|356608621|emb|CAFW01000017.1| 10707 11750 3 + 1044 hypothetical protein - none -
fig|6666666.67508.peg.2186 CDS gi|356608632|emb|CAFW01000016.1| 495 1859 3 + 1365 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.67508.peg.2187 CDS gi|356608632|emb|CAFW01000016.1| 3133 1865 -1 - 1269 tRNA-guanine transglycosylase (EC 2.4.2.29) Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.2188 CDS gi|356608632|emb|CAFW01000016.1| 5721 3178 -3 - 2544 putative membrane protein - none -
fig|6666666.67508.peg.2189 CDS gi|356608632|emb|CAFW01000016.1| 6333 5932 -3 - 402 hypothetical protein - none -
fig|6666666.67508.peg.2190 CDS gi|356608632|emb|CAFW01000016.1| 6614 7570 2 + 957 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67508.peg.2191 CDS gi|356608632|emb|CAFW01000016.1| 7567 10215 1 + 2649 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.2192 CDS gi|356608632|emb|CAFW01000016.1| 10270 11148 1 + 879 Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10) Fatty Acid Biosynthesis FASII
fig|6666666.67508.peg.2193 CDS gi|356608632|emb|CAFW01000016.1| 12211 11192 -1 - 1020 predicted Co/Zn/Cd cation transporter - none -
fig|6666666.67508.peg.2194 CDS gi|356608632|emb|CAFW01000016.1| 12678 12208 -3 - 471 hypothetical protein - none -
fig|6666666.67508.peg.2195 CDS gi|356608632|emb|CAFW01000016.1| 12988 13755 1 + 768 phosphoesterase, PA-phosphatase related - none -
fig|6666666.67508.peg.2196 CDS gi|356608632|emb|CAFW01000016.1| 13752 14828 3 + 1077 hypothetical protein - none -
fig|6666666.67508.peg.2197 CDS gi|356608632|emb|CAFW01000016.1| 15327 15115 -3 - 213 FIG00546156: hypothetical protein - none -
fig|6666666.67508.peg.2198 CDS gi|356608632|emb|CAFW01000016.1| 15859 15380 -1 - 480 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) - none -
fig|6666666.67508.peg.2199 CDS gi|356608632|emb|CAFW01000016.1| 16388 15894 -2 - 495 FIG00544249: hypothetical protein - none -
fig|6666666.67508.peg.2200 CDS gi|356608632|emb|CAFW01000016.1| 16427 17443 2 + 1017 Arogenate dehydrogenase (EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.67508.peg.2201 CDS gi|356608632|emb|CAFW01000016.1| 18453 17524 -3 - 930 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67508.peg.2202 CDS gi|356608632|emb|CAFW01000016.1| 18536 19930 2 + 1395 Predicted transcriptional regulator of pyridoxine metabolism Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.67508.peg.2203 CDS gi|356608632|emb|CAFW01000016.1| 20045 21295 2 + 1251 Putative membrane protein - none -
fig|6666666.67508.peg.2204 CDS gi|356608651|emb|CAFW01000015.1| 28 1359 1 + 1332 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.67508.peg.2205 CDS gi|356608651|emb|CAFW01000015.1| 2270 1356 -2 - 915 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.67508.peg.2206 CDS gi|356608651|emb|CAFW01000015.1| 2407 2973 1 + 567 Putative secreted protein - none -
fig|6666666.67508.peg.2207 CDS gi|356608651|emb|CAFW01000015.1| 3941 3012 -2 - 930 FIG00544955: hypothetical protein - none -
fig|6666666.67508.peg.2208 CDS gi|356608651|emb|CAFW01000015.1| 3995 4498 2 + 504 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.67508.peg.2209 CDS gi|356608651|emb|CAFW01000015.1| 4455 5381 3 + 927 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.67508.peg.2210 CDS gi|356608651|emb|CAFW01000015.1| 5374 6063 1 + 690 hypothetical protein - none -
fig|6666666.67508.peg.2211 CDS gi|356608651|emb|CAFW01000015.1| 6122 6298 2 + 177 hypothetical protein - none -
fig|6666666.67508.peg.2212 CDS gi|356608651|emb|CAFW01000015.1| 7199 6276 -2 - 924 Protein rarD - none -
fig|6666666.67508.peg.2213 CDS gi|356608651|emb|CAFW01000015.1| 7393 10962 1 + 3570 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67508.peg.2214 CDS gi|356608651|emb|CAFW01000015.1| 11073 12275 3 + 1203 putative epoxyalkane:coenzyme M transferase - none -
fig|6666666.67508.peg.2215 CDS gi|356608651|emb|CAFW01000015.1| 12910 12377 -1 - 534 FIG00545508: hypothetical protein - none -
fig|6666666.67508.peg.2216 CDS gi|356608651|emb|CAFW01000015.1| 15005 13026 -2 - 1980 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.67508.peg.2217 CDS gi|356608651|emb|CAFW01000015.1| 15191 16486 2 + 1296 Threonine dehydratase biosynthetic (EC 4.3.1.19) Branched-Chain Amino Acid Biosynthesis
fig|6666666.67508.peg.2218 CDS gi|356608651|emb|CAFW01000015.1| 16486 17136 1 + 651 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.67508.peg.2219 CDS gi|356608651|emb|CAFW01000015.1| 17155 17397 1 + 243 FIG00544856: hypothetical protein - none -
fig|6666666.67508.peg.2220 CDS gi|356608651|emb|CAFW01000015.1| 17441 17767 2 + 327 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.67508.peg.2221 CDS gi|356608651|emb|CAFW01000015.1| 18057 18611 3 + 555 hypothetical protein - none -
fig|6666666.67508.peg.2222 CDS gi|356608651|emb|CAFW01000015.1| 19630 18641 -1 - 990 FIG00544169: hypothetical protein - none -
fig|6666666.67508.peg.2223 CDS gi|356608651|emb|CAFW01000015.1| 20325 19657 -3 - 669 FIG00548980: hypothetical protein - none -
fig|6666666.67508.peg.2224 CDS gi|356608651|emb|CAFW01000015.1| 21944 20493 -2 - 1452 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-342610.3.peg.1536
fig|6666666.67508.peg.2225 CDS gi|356608651|emb|CAFW01000015.1| 24176 21972 -2 - 2205 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.67508.peg.2226 CDS gi|356608651|emb|CAFW01000015.1| 24879 24310 -3 - 570 Predicted biotin repressor from TetR family Biotin biosynthesis
fig|6666666.67508.peg.2227 CDS gi|356608651|emb|CAFW01000015.1| 25091 25810 2 + 720 FIG00545144: hypothetical protein - none -
fig|6666666.67508.peg.2228 CDS gi|356608651|emb|CAFW01000015.1| 25839 26393 3 + 555 FIG00545115: hypothetical protein - none -
fig|6666666.67508.peg.2229 CDS gi|356608651|emb|CAFW01000015.1| 26535 27848 3 + 1314 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.67508.peg.2230 CDS gi|356608651|emb|CAFW01000015.1| 27857 28969 2 + 1113 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.67508.peg.2231 CDS gi|356608651|emb|CAFW01000015.1| 28971 29573 3 + 603 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis
fig|6666666.67508.peg.2232 CDS gi|356608651|emb|CAFW01000015.1| 29582 29743 2 + 162 hypothetical protein - none -
fig|6666666.67508.peg.2233 CDS gi|356608651|emb|CAFW01000015.1| 29747 31108 2 + 1362 putative transport protein - none -
fig|6666666.67508.peg.2234 CDS gi|356608651|emb|CAFW01000015.1| 31112 31747 2 + 636 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.67508.peg.2235 CDS gi|356608651|emb|CAFW01000015.1| 31763 32548 2 + 786 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.67508.peg.2236 CDS gi|356608651|emb|CAFW01000015.1| 32545 33336 1 + 792 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.67508.peg.2237 CDS gi|356608651|emb|CAFW01000015.1| 33370 34134 1 + 765 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.67508.peg.2238 CDS gi|356608651|emb|CAFW01000015.1| 34131 34550 3 + 420 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) Histidine Biosynthesis
fig|6666666.67508.peg.2239 CDS gi|356608651|emb|CAFW01000015.1| 34568 35203 2 + 636 FIG00545012: hypothetical protein - none -
fig|6666666.67508.peg.2240 CDS gi|356608651|emb|CAFW01000015.1| 35293 36120 1 + 828 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.67508.peg.2241 CDS gi|356608651|emb|CAFW01000015.1| 36157 37122 1 + 966 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.67508.peg.2242 CDS gi|356608651|emb|CAFW01000015.1| 37268 38686 2 + 1419 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67508.peg.2243 CDS gi|356608651|emb|CAFW01000015.1| 38855 39463 2 + 609 Cytoplasmic copper homeostasis protein CutC Copper homeostasis: copper tolerance
fig|6666666.67508.peg.2244 CDS gi|356608651|emb|CAFW01000015.1| 40498 39452 -1 - 1047 hypothetical protein - none -
fig|6666666.67508.peg.2245 CDS gi|356608651|emb|CAFW01000015.1| 41844 40753 -3 - 1092 PrpF protein involved in 2-methylcitrate cycle - none -
fig|6666666.67508.peg.2246 CDS gi|356608651|emb|CAFW01000015.1| 44406 41914 -3 - 2493 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.67508.peg.2247 CDS gi|356608651|emb|CAFW01000015.1| 45754 44546 -1 - 1209 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.2248 CDS gi|356608651|emb|CAFW01000015.1| 45789 46187 3 + 399 FIG00544156: hypothetical protein - none -
fig|6666666.67508.peg.2249 CDS gi|356608651|emb|CAFW01000015.1| 47329 46202 -1 - 1128 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.67508.peg.2250 CDS gi|356608651|emb|CAFW01000015.1| 47518 48858 1 + 1341 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.67508.peg.2251 CDS gi|356608651|emb|CAFW01000015.1| 48991 49692 1 + 702 Cell division initiation protein - none -
fig|6666666.67508.peg.2252 CDS gi|356608651|emb|CAFW01000015.1| 50238 49741 -3 - 498 hypothetical protein - none -
fig|6666666.67508.peg.2253 CDS gi|356608651|emb|CAFW01000015.1| 50366 50881 2 + 516 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.67508.peg.2254 CDS gi|356608651|emb|CAFW01000015.1| 50878 51612 1 + 735 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.67508.peg.2255 CDS gi|356608651|emb|CAFW01000015.1| 51634 52434 1 + 801 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.67508.peg.2256 CDS gi|356608651|emb|CAFW01000015.1| 53021 54526 2 + 1506 amino acid carrier protein - none -
fig|6666666.67508.peg.2257 CDS gi|356608651|emb|CAFW01000015.1| 54527 54805 2 + 279 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.2258 CDS gi|356608651|emb|CAFW01000015.1| 54848 58306 2 + 3459 Chromosome partition protein smc - none -
fig|6666666.67508.peg.2259 CDS gi|356608651|emb|CAFW01000015.1| 58317 60071 3 + 1755 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.67508.peg.2260 CDS gi|356608651|emb|CAFW01000015.1| 60300 63197 3 + 2898 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B Multi-subunit cation antiporter;
Multi-subunit cation antiporter
fig|6666666.67508.peg.2261 CDS gi|356608651|emb|CAFW01000015.1| 63198 63545 3 + 348 Na(+) H(+) antiporter subunit C Multi-subunit cation antiporter
fig|6666666.67508.peg.2262 CDS gi|356608651|emb|CAFW01000015.1| 63545 65182 2 + 1638 Na(+) H(+) antiporter subunit D Multi-subunit cation antiporter
fig|6666666.67508.peg.2263 CDS gi|356608651|emb|CAFW01000015.1| 65182 65565 1 + 384 Na(+) H(+) antiporter subunit E Multi-subunit cation antiporter
fig|6666666.67508.peg.2264 CDS gi|356608651|emb|CAFW01000015.1| 65569 65823 1 + 255 Na(+) H(+) antiporter subunit F Multi-subunit cation antiporter
fig|6666666.67508.peg.2265 CDS gi|356608651|emb|CAFW01000015.1| 65823 66212 3 + 390 Na(+) H(+) antiporter subunit G Multi-subunit cation antiporter
fig|6666666.67508.peg.2266 CDS gi|356608651|emb|CAFW01000015.1| 66369 67751 3 + 1383 Ammonium transporter Ammonia assimilation
fig|6666666.67508.peg.2267 CDS gi|356608651|emb|CAFW01000015.1| 67758 68096 3 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.67508.peg.2268 CDS gi|356608651|emb|CAFW01000015.1| 68245 70194 1 + 1950 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.67508.peg.2269 CDS gi|356608651|emb|CAFW01000015.1| 70238 71875 2 + 1638 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.67508.peg.2270 CDS gi|356608651|emb|CAFW01000015.1| 74388 71965 -3 - 2424 O-antigen acetylase - none -
fig|6666666.67508.peg.2271 CDS gi|356608651|emb|CAFW01000015.1| 74703 75182 3 + 480 SSU ribosomal protein S16p - none -
fig|6666666.67508.peg.2272 CDS gi|356608651|emb|CAFW01000015.1| 75405 75770 3 + 366 16S rRNA processing protein RimM - none -
fig|6666666.67508.peg.2273 CDS gi|356608651|emb|CAFW01000015.1| 75767 76618 2 + 852 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation
fig|6666666.67508.peg.2274 CDS gi|356608651|emb|CAFW01000015.1| 76603 76971 1 + 369 FIG00545499: hypothetical protein - none -
fig|6666666.67508.peg.2275 CDS gi|356608651|emb|CAFW01000015.1| 78163 76958 -1 - 1206 Protein RtcB - none -
fig|6666666.67508.peg.2276 CDS gi|356608651|emb|CAFW01000015.1| 78425 80722 2 + 2298 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.67508.peg.2277 CDS gi|356608651|emb|CAFW01000015.1| 81044 82603 2 + 1560 efflux system protein - none -
fig|6666666.67508.peg.2278 CDS gi|356608651|emb|CAFW01000015.1| 82622 83275 2 + 654 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.67508.peg.2279 CDS gi|356608651|emb|CAFW01000015.1| 83272 84540 1 + 1269 ABC transporter, permease protein - none -
fig|6666666.67508.peg.2280 CDS gi|356608651|emb|CAFW01000015.1| 84655 84999 1 + 345 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.67508.peg.2281 CDS gi|356608651|emb|CAFW01000015.1| 86761 85049 -1 - 1713 ABC transporter, NBP/MSD fusion protein - none -
fig|6666666.67508.peg.2282 CDS gi|356608651|emb|CAFW01000015.1| 86813 87541 2 + 729 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67508.peg.2283 CDS gi|356608651|emb|CAFW01000015.1| 87519 88238 3 + 720 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.67508.peg.2284 CDS gi|356608651|emb|CAFW01000015.1| 88239 88910 3 + 672 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.67508.peg.2285 CDS gi|356608651|emb|CAFW01000015.1| 88910 89215 2 + 306 Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII Ribonuclease H
fig|6666666.67508.peg.2286 CDS gi|356608651|emb|CAFW01000015.1| 89370 89726 3 + 357 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.67508.peg.2287 CDS gi|356608651|emb|CAFW01000015.1| 89727 91277 3 + 1551 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.67508.peg.2288 CDS gi|356608651|emb|CAFW01000015.1| 91278 92441 3 + 1164 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367
fig|6666666.67508.peg.2289 CDS gi|356608651|emb|CAFW01000015.1| 92449 93294 1 + 846 Tyrosine recombinase XerC - none -
fig|6666666.67508.peg.2290 CDS gi|356608651|emb|CAFW01000015.1| 93721 93269 -1 - 453 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.67508.peg.2291 CDS gi|356608651|emb|CAFW01000015.1| 94081 93929 -1 - 153 hypothetical protein - none -
fig|6666666.67508.peg.2292 CDS gi|356608651|emb|CAFW01000015.1| 94115 94834 2 + 720 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.67508.peg.2293 CDS gi|356608651|emb|CAFW01000015.1| 94963 94823 -1 - 141 hypothetical protein - none -
fig|6666666.67508.peg.2294 CDS gi|356608651|emb|CAFW01000015.1| 94967 95779 2 + 813 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.67508.peg.2295 CDS gi|356608651|emb|CAFW01000015.1| 95890 96615 1 + 726 Uridylate kinase (EC 2.7.4.-) - none -
fig|6666666.67508.peg.2296 CDS gi|356608651|emb|CAFW01000015.1| 96655 97212 1 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.67508.peg.2297 CDS gi|356608651|emb|CAFW01000015.1| 97295 98128 2 + 834 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.2298 CDS gi|356608651|emb|CAFW01000015.1| 98474 98106 -2 - 369 FIG00544474: hypothetical protein - none -
fig|6666666.67508.peg.2299 CDS gi|356608651|emb|CAFW01000015.1| 98559 99653 3 + 1095 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.67508.peg.2300 CDS gi|356608651|emb|CAFW01000015.1| 99653 100402 2 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.2301 CDS gi|356608651|emb|CAFW01000015.1| 100402 101868 1 + 1467 FIG00546336: hypothetical protein - none -
fig|6666666.67508.peg.2302 CDS gi|356608651|emb|CAFW01000015.1| 103172 101865 -2 - 1308 CONSERVED 13E12 REPEAT FAMILY PROTEIN - none -
fig|6666666.67508.peg.2303 CDS gi|356608651|emb|CAFW01000015.1| 103769 103329 -2 - 441 hypothetical membrane protein - none -
fig|6666666.67508.peg.2304 CDS gi|356608651|emb|CAFW01000015.1| 103885 105027 1 + 1143 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67508.peg.2305 CDS gi|356608651|emb|CAFW01000015.1| 105063 106268 3 + 1206 Membrane-associated zinc metalloprotease - none -
fig|6666666.67508.peg.2306 CDS gi|356608651|emb|CAFW01000015.1| 106321 107478 1 + 1158 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.67508.peg.2307 CDS gi|356608651|emb|CAFW01000015.1| 107583 109340 3 + 1758 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.2308 CDS gi|356608651|emb|CAFW01000015.1| 109364 110236 2 + 873 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.67508.peg.2309 CDS gi|356608651|emb|CAFW01000015.1| 110799 110365 -3 - 435 FIG00544201: hypothetical protein - none -
fig|6666666.67508.peg.2310 CDS gi|356608651|emb|CAFW01000015.1| 111246 110842 -3 - 405 FIG00544201: hypothetical protein - none -
fig|6666666.67508.peg.2311 CDS gi|356608651|emb|CAFW01000015.1| 112960 111584 -1 - 1377 NADPH-dependent mycothiol reductase Mtr Glutathione analogs: mycothiol
fig|6666666.67508.peg.2312 CDS gi|356608651|emb|CAFW01000015.1| 113974 112997 -1 - 978 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.67508.peg.2313 CDS gi|356608651|emb|CAFW01000015.1| 114169 115677 1 + 1509 Malate:quinone oxidoreductase (EC 1.1.5.4) TCA Cycle
fig|6666666.67508.peg.2314 CDS gi|356608651|emb|CAFW01000015.1| 116861 115674 -2 - 1188 Selenoprotein O and cysteine-containing homologs Selenoprotein O
fig|6666666.67508.peg.2315 CDS gi|356608651|emb|CAFW01000015.1| 117718 116858 -1 - 861 Phenazine biosynthesis protein PhzF like - none -
fig|6666666.67508.peg.2316 CDS gi|356608651|emb|CAFW01000015.1| 117801 118217 3 + 417 No significant database matches - none -
fig|6666666.67508.peg.2317 CDS gi|356608651|emb|CAFW01000015.1| 118210 118950 1 + 741 No significant database matches - none -
fig|6666666.67508.peg.2318 CDS gi|356608651|emb|CAFW01000015.1| 119636 118947 -2 - 690 UPF0246 protein YaaA - none -
fig|6666666.67508.peg.2319 CDS gi|356608651|emb|CAFW01000015.1| 119667 121424 3 + 1758 Prolyl-tRNA synthetase (EC 6.1.1.15) - none -
fig|6666666.67508.peg.2320 CDS gi|356608651|emb|CAFW01000015.1| 122117 121425 -2 - 693 FIG00544866: hypothetical protein - none -
fig|6666666.67508.peg.2321 CDS gi|356608651|emb|CAFW01000015.1| 122201 122740 2 + 540 COG0779: clustered with transcription termination protein NusA - none -
fig|6666666.67508.peg.2322 CDS gi|356608651|emb|CAFW01000015.1| 122800 123822 1 + 1023 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.67508.peg.2323 CDS gi|356608651|emb|CAFW01000015.1| 124289 127150 2 + 2862 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67508.peg.2324 CDS gi|356608651|emb|CAFW01000015.1| 127315 127749 1 + 435 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.67508.peg.2325 CDS gi|356608651|emb|CAFW01000015.1| 127758 128729 3 + 972 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.67508.peg.2326 CDS gi|356608651|emb|CAFW01000015.1| 128716 130026 1 + 1311 putative DNA-damage-inducible protein F - none -
fig|6666666.67508.peg.2327 CDS gi|356608651|emb|CAFW01000015.1| 130120 130941 1 + 822 putative SimX4 homolog - none -
fig|6666666.67508.peg.2328 CDS gi|356608651|emb|CAFW01000015.1| 130944 131630 3 + 687 4@1-phosphopantetheinyl transferase EntD (EC 2.7.8.-) - none -
fig|6666666.67508.peg.2329 CDS gi|356608651|emb|CAFW01000015.1| 132519 131656 -3 - 864 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses
fig|6666666.67508.peg.2330 CDS gi|356608651|emb|CAFW01000015.1| 132565 133581 1 + 1017 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.67508.peg.2331 CDS gi|356608651|emb|CAFW01000015.1| 133588 134508 1 + 921 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) Purine conversions;
Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.2332 CDS gi|356608651|emb|CAFW01000015.1| 134618 134887 2 + 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.67508.peg.2333 CDS gi|356608651|emb|CAFW01000015.1| 135130 137406 1 + 2277 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - none -
fig|6666666.67508.peg.2334 CDS gi|356608651|emb|CAFW01000015.1| 138197 137523 -2 - 675 No significant database matches - none -
fig|6666666.67508.peg.2335 CDS gi|356608651|emb|CAFW01000015.1| 138647 138261 -2 - 387 Lactoylglutathione lyase and related lyases - none -
fig|6666666.67508.peg.2336 CDS gi|356608651|emb|CAFW01000015.1| 138746 139492 2 + 747 Dihydrodipicolinate reductase (EC 1.3.1.26) - none -
fig|6666666.67508.peg.2337 CDS gi|356608651|emb|CAFW01000015.1| 139493 140242 2 + 750 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.67508.peg.2338 CDS gi|356608651|emb|CAFW01000015.1| 140298 141242 3 + 945 Dihydrodipicolinate synthase (EC 4.2.1.52) - none -
fig|6666666.67508.peg.2339 CDS gi|356608651|emb|CAFW01000015.1| 141239 143407 2 + 2169 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog - none -
fig|6666666.67508.peg.2340 CDS gi|356608651|emb|CAFW01000015.1| 143449 144072 1 + 624 FIG00544433: hypothetical protein - none -
fig|6666666.67508.peg.2341 CDS gi|356608651|emb|CAFW01000015.1| 144423 147338 3 + 2916 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67508.peg.2342 CDS gi|356608651|emb|CAFW01000015.1| 147568 148692 1 + 1125 Integral membrane protein TerC - none -
fig|6666666.67508.peg.2343 CDS gi|356608651|emb|CAFW01000015.1| 149110 148817 -1 - 294 FIG00544062: hypothetical protein - none -
fig|6666666.67508.peg.2344 CDS gi|356608651|emb|CAFW01000015.1| 149189 149758 2 + 570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.2345 CDS gi|356608651|emb|CAFW01000015.1| 149759 150271 2 + 513 C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin synthesis cluster
fig|6666666.67508.peg.2346 CDS gi|356608651|emb|CAFW01000015.1| 150455 150703 2 + 249 putative transcription regulator - none -
fig|6666666.67508.peg.2347 CDS gi|356608651|emb|CAFW01000015.1| 150925 151767 1 + 843 Phage shock protein A (IM30) , suppresses sigma54-dependent transcription - none -
fig|6666666.67508.peg.2348 CDS gi|356608651|emb|CAFW01000015.1| 152456 151854 -2 - 603 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67508.peg.2349 CDS gi|356608651|emb|CAFW01000015.1| 153200 152583 -2 - 618 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67508.peg.2350 CDS gi|356608651|emb|CAFW01000015.1| 153892 153200 -1 - 693 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67508.peg.2351 CDS gi|356608651|emb|CAFW01000015.1| 154461 153892 -3 - 570 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.67508.peg.2352 CDS gi|356608651|emb|CAFW01000015.1| 154560 154775 3 + 216 FIG00545605: hypothetical protein - none -
fig|6666666.67508.peg.2353 CDS gi|356608651|emb|CAFW01000015.1| 154998 156140 3 + 1143 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67508.peg.2354 CDS gi|356608651|emb|CAFW01000015.1| 156264 156866 3 + 603 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.67508.peg.2355 CDS gi|356608651|emb|CAFW01000015.1| 157817 156879 -2 - 939 glutamate transporter permease protein GluD - none -
fig|6666666.67508.peg.2356 CDS gi|356608651|emb|CAFW01000015.1| 158503 157817 -1 - 687 glutamate ABC-type transporter, permease component - none -
fig|6666666.67508.peg.2357 CDS gi|356608651|emb|CAFW01000015.1| 159486 158608 -3 - 879 glutamate-binding protein GluB - none -
fig|6666666.67508.peg.2358 CDS gi|356608651|emb|CAFW01000015.1| 160272 159529 -3 - 744 amino acid ABC transporter, ATP-binding protein (glnQ) - none -
fig|6666666.67508.peg.2359 CDS gi|356608651|emb|CAFW01000015.1| 160519 162183 1 + 1665 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases
fig|6666666.67508.peg.2360 CDS gi|356608651|emb|CAFW01000015.1| 162231 162887 3 + 657 FIG00544570: hypothetical protein - none -
fig|6666666.67508.peg.2361 CDS gi|356608651|emb|CAFW01000015.1| 164062 162884 -1 - 1179 No significant database matches - none -
fig|6666666.67508.peg.2362 CDS gi|356608651|emb|CAFW01000015.1| 165396 164068 -3 - 1329 ATPase involved in DNA repair - none -
fig|6666666.67508.peg.2363 CDS gi|356608651|emb|CAFW01000015.1| 165579 166202 3 + 624 FIG00545147: hypothetical protein - none -
fig|6666666.67508.peg.2364 CDS gi|356608651|emb|CAFW01000015.1| 166206 167138 3 + 933 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) - none -
fig|6666666.67508.peg.2365 CDS gi|356608651|emb|CAFW01000015.1| 167140 168045 1 + 906 Diaminopimelate epimerase (EC 5.1.1.7) CBSS-84588.1.peg.1247;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.2366 CDS gi|356608651|emb|CAFW01000015.1| 168596 168042 -2 - 555 FIG00543926: hypothetical protein - none -
fig|6666666.67508.peg.2367 CDS gi|356608651|emb|CAFW01000015.1| 169369 168599 -1 - 771 FIG00546075: hypothetical protein - none -
fig|6666666.67508.peg.2368 CDS gi|356608651|emb|CAFW01000015.1| 169474 171051 1 + 1578 GTP-binding protein HflX Hfl operon
fig|6666666.67508.peg.2369 CDS gi|356608651|emb|CAFW01000015.1| 171147 172430 3 + 1284 xanthine/uracil permeases - none -
fig|6666666.67508.peg.2370 CDS gi|356608651|emb|CAFW01000015.1| 172523 173026 2 + 504 FIG00546412: hypothetical protein - none -
fig|6666666.67508.peg.2371 CDS gi|356608651|emb|CAFW01000015.1| 173386 173120 -1 - 267 Phosphocarrier protein of PTS system - none -
fig|6666666.67508.peg.2372 CDS gi|356608651|emb|CAFW01000015.1| 175651 173522 -1 - 2130 PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization;
Fructose utilization
fig|6666666.67508.peg.2373 CDS gi|356608651|emb|CAFW01000015.1| 176657 175692 -2 - 966 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.67508.peg.2374 CDS gi|356608651|emb|CAFW01000015.1| 176928 178607 3 + 1680 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.67508.peg.2375 CDS gi|356608651|emb|CAFW01000015.1| 179486 178692 -2 - 795 Transcriptional repressor of the fructose operon, DeoR family Fructose utilization
fig|6666666.67508.peg.2376 CDS gi|356608651|emb|CAFW01000015.1| 179740 179600 -1 - 141 hypothetical protein - none -
fig|6666666.67508.peg.2377 CDS gi|356608651|emb|CAFW01000015.1| 180598 179891 -1 - 708 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.67508.peg.2378 CDS gi|356608651|emb|CAFW01000015.1| 180904 181290 1 + 387 hypothetical protein - none -
fig|6666666.67508.peg.2379 CDS gi|356608651|emb|CAFW01000015.1| 181482 181901 3 + 420 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.67508.peg.2380 CDS gi|356608651|emb|CAFW01000015.1| 185837 181908 -2 - 3930 ATP-dependent helicase HrpA - none -
fig|6666666.67508.peg.2381 CDS gi|356608651|emb|CAFW01000015.1| 186169 187230 1 + 1062 FIG00544563: hypothetical protein - none -
fig|6666666.67508.peg.2382 CDS gi|356608651|emb|CAFW01000015.1| 188289 187324 -3 - 966 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.67508.peg.2383 CDS gi|356608651|emb|CAFW01000015.1| 188493 189038 3 + 546 Alkylhydroperoxidase protein D Thioredoxin-disulfide reductase
fig|6666666.67508.peg.2384 CDS gi|356608651|emb|CAFW01000015.1| 189141 189332 3 + 192 hypothetical protein - none -
fig|6666666.67508.peg.2385 CDS gi|356608651|emb|CAFW01000015.1| 189360 189557 3 + 198 hypothetical protein - none -
fig|6666666.67508.peg.2386 CDS gi|356608651|emb|CAFW01000015.1| 192598 190070 -1 - 2529 putative helicase - none -
fig|6666666.67508.peg.2387 CDS gi|356608651|emb|CAFW01000015.1| 193630 192656 -1 - 975 FIG00544614: hypothetical protein - none -
fig|6666666.67508.peg.2388 CDS gi|356608651|emb|CAFW01000015.1| 194019 195095 3 + 1077 hypothetical protein - none -
fig|6666666.67508.peg.2389 CDS gi|356608651|emb|CAFW01000015.1| 196118 195129 -2 - 990 UDP-glucose 4-epimerase (EC 5.1.3.2) Rhamnose containing glycans
fig|6666666.67508.peg.2390 CDS gi|356608651|emb|CAFW01000015.1| 196949 196269 -2 - 681 Iron-dependent repressor IdeR/DtxR Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.2391 CDS gi|356608651|emb|CAFW01000015.1| 198274 197270 -1 - 1005 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.67508.peg.2392 CDS gi|356608651|emb|CAFW01000015.1| 198875 198411 -2 - 465 D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase
fig|6666666.67508.peg.2393 CDS gi|356608651|emb|CAFW01000015.1| 200475 198925 -3 - 1551 Putative transferase - none -
fig|6666666.67508.peg.2394 CDS gi|356608651|emb|CAFW01000015.1| 200862 200476 -3 - 387 FIG00545207: hypothetical protein - none -
fig|6666666.67508.peg.2395 CDS gi|356608651|emb|CAFW01000015.1| 201029 201271 2 + 243 FIG00544358: hypothetical protein - none -
fig|6666666.67508.peg.2396 CDS gi|356608651|emb|CAFW01000015.1| 201361 203055 1 + 1695 DNA or RNA helicases of superfamily II - none -
fig|6666666.67508.peg.2397 CDS gi|356608651|emb|CAFW01000015.1| 203232 203843 3 + 612 hypothetical membrane protein - none -
fig|6666666.67508.peg.2398 CDS gi|356608651|emb|CAFW01000015.1| 204041 203922 -2 - 120 hypothetical protein - none -
fig|6666666.67508.peg.2399 CDS gi|356608651|emb|CAFW01000015.1| 204116 205783 2 + 1668 putative integral membrane protein - none -
fig|6666666.67508.peg.2400 CDS gi|356608651|emb|CAFW01000015.1| 206009 206497 2 + 489 hypothetical protein - none -
fig|6666666.67508.peg.2401 CDS gi|356608651|emb|CAFW01000015.1| 206941 206708 -1 - 234 hypothetical protein - none -
fig|6666666.67508.peg.2402 CDS gi|356608651|emb|CAFW01000015.1| 207179 208360 2 + 1182 hypothetical protein - none -
fig|6666666.67508.peg.2403 CDS gi|356608651|emb|CAFW01000015.1| 209424 208366 -3 - 1059 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.67508.peg.2404 CDS gi|356608651|emb|CAFW01000015.1| 209926 209552 -1 - 375 4-hydroxybenzoate transporter Gentisate degradation;
Salicylate and gentisate catabolism;
p-Hydroxybenzoate degradation
fig|6666666.67508.peg.2405 CDS gi|356608651|emb|CAFW01000015.1| 210906 209890 -3 - 1017 4-hydroxybenzoate transporter Gentisate degradation;
Salicylate and gentisate catabolism;
p-Hydroxybenzoate degradation
fig|6666666.67508.peg.2406 CDS gi|356608651|emb|CAFW01000015.1| 211087 210938 -1 - 150 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) p-Hydroxybenzoate degradation
fig|6666666.67508.peg.2407 CDS gi|356608651|emb|CAFW01000015.1| 212154 211156 -3 - 999 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) p-Hydroxybenzoate degradation
fig|6666666.67508.peg.2408 CDS gi|356608651|emb|CAFW01000015.1| 212719 213291 1 + 573 GCN5-related N-acetyltransferase - none -
fig|6666666.67508.peg.2409 CDS gi|356608651|emb|CAFW01000015.1| 214779 213361 -3 - 1419 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Transcription initiation, bacterial sigma factors
fig|6666666.67508.peg.2410 CDS gi|356608651|emb|CAFW01000015.1| 215844 215086 -3 - 759 Polyphosphate glucokinase (EC 2.7.1.63) Glycolysis and Gluconeogenesis;
Polyphosphate
fig|6666666.67508.peg.2411 CDS gi|356608651|emb|CAFW01000015.1| 215864 216721 2 + 858 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.67508.peg.2412 CDS gi|356608651|emb|CAFW01000015.1| 216977 217267 2 + 291 FIG00545109: hypothetical protein - none -
fig|6666666.67508.peg.2413 CDS gi|356608651|emb|CAFW01000015.1| 217937 217395 -2 - 543 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN - none -
fig|6666666.67508.peg.2414 CDS gi|356608651|emb|CAFW01000015.1| 218151 218648 3 + 498 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67508.peg.2415 CDS gi|356608651|emb|CAFW01000015.1| 218881 219942 1 + 1062 FIG00545882: hypothetical protein - none -
fig|6666666.67508.peg.2416 CDS gi|356608651|emb|CAFW01000015.1| 220035 220931 3 + 897 PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH PROTEIN - none -
fig|6666666.67508.peg.2417 CDS gi|356608651|emb|CAFW01000015.1| 220928 222274 2 + 1347 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.67508.peg.2418 CDS gi|356608651|emb|CAFW01000015.1| 222492 224393 3 + 1902 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.67508.peg.2419 CDS gi|356608651|emb|CAFW01000015.1| 225733 224498 -1 - 1236 Ribonuclease D (EC 3.1.26.3) - none -
fig|6666666.67508.peg.2420 CDS gi|356608651|emb|CAFW01000015.1| 226355 225828 -2 - 528 Uncharacterized protein Q1 colocalized with Q - none -
fig|6666666.67508.peg.2421 CDS gi|356608651|emb|CAFW01000015.1| 226628 227329 2 + 702 Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria Heme and Siroheme Biosynthesis
fig|6666666.67508.peg.2422 CDS gi|356608651|emb|CAFW01000015.1| 227967 227512 -3 - 456 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase
fig|6666666.67508.peg.2423 CDS gi|356608651|emb|CAFW01000015.1| 229216 227978 -1 - 1239 Putative membrane protein Q2 colocalized with Q - none -
fig|6666666.67508.peg.2424 CDS gi|356608651|emb|CAFW01000015.1| 229683 229330 -3 - 354 hypothetical protein - none -
fig|6666666.67508.peg.2425 CDS gi|356608651|emb|CAFW01000015.1| 231070 230081 -1 - 990 hypothetical protein - none -
fig|6666666.67508.peg.2426 CDS gi|356608651|emb|CAFW01000015.1| 231906 231115 -3 - 792 hypothetical protein - none -
fig|6666666.67508.peg.2427 CDS gi|356608651|emb|CAFW01000015.1| 232015 232152 1 + 138 hypothetical protein - none -
fig|6666666.67508.peg.2428 CDS gi|356608868|emb|CAFW01000014.1| 1088 1207 2 + 120 hypothetical protein - none -
fig|6666666.67508.peg.2429 CDS gi|356608868|emb|CAFW01000014.1| 1538 1410 -2 - 129 hypothetical protein - none -
fig|6666666.67508.peg.2430 CDS gi|356608868|emb|CAFW01000014.1| 2153 3538 2 + 1386 Mg/Co/Ni transporter MgtE Magnesium transport
fig|6666666.67508.peg.2431 CDS gi|356608868|emb|CAFW01000014.1| 3829 5412 1 + 1584 di- and tricarboxylate transporter - none -
fig|6666666.67508.peg.2432 CDS gi|356608868|emb|CAFW01000014.1| 5779 5901 1 + 123 hypothetical protein - none -
fig|6666666.67508.peg.2433 CDS gi|356608868|emb|CAFW01000014.1| 6368 5898 -2 - 471 Mobile element protein - none -
fig|6666666.67508.peg.2434 CDS gi|356608874|emb|CAFW01000013.1| 869 1321 2 + 453 Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) Siderophore Enterobactin
fig|6666666.67508.peg.2435 CDS gi|356608874|emb|CAFW01000013.1| 1520 1993 2 + 474 Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) Siderophore Enterobactin
fig|6666666.67508.peg.2436 CDS gi|356608874|emb|CAFW01000013.1| 2180 3544 2 + 1365 TPR-repeat-containing protein - none -
fig|6666666.67508.peg.2437 CDS gi|356608874|emb|CAFW01000013.1| 3552 4535 3 + 984 4-nitrophenylphosphatase (EC 3.1.3.41) - none -
fig|6666666.67508.peg.2438 CDS gi|356608874|emb|CAFW01000013.1| 4535 4702 2 + 168 FIG00545954: hypothetical protein - none -
fig|6666666.67508.peg.2439 CDS gi|356608874|emb|CAFW01000013.1| 4702 5517 1 + 816 RNA binding methyltransferase FtsJ like CBSS-446462.5.peg.2987
fig|6666666.67508.peg.2440 CDS gi|356608874|emb|CAFW01000013.1| 5514 6449 3 + 936 NAD kinase (EC 2.7.1.23) CBSS-446462.5.peg.2987;
NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.2441 CDS gi|356608874|emb|CAFW01000013.1| 6570 8288 3 + 1719 DNA repair protein RecN CBSS-446462.5.peg.2987;
DNA repair, bacterial
fig|6666666.67508.peg.2442 CDS gi|356608874|emb|CAFW01000013.1| 8339 9520 2 + 1182 FIG005773: conserved membrane protein ML1361 CBSS-446462.5.peg.2987
fig|6666666.67508.peg.2443 CDS gi|356608874|emb|CAFW01000013.1| 9524 10489 2 + 966 FIG007481: hypothetical protein CBSS-446462.5.peg.2987
fig|6666666.67508.peg.2444 CDS gi|356608874|emb|CAFW01000013.1| 10495 11133 1 + 639 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67508.peg.2445 CDS gi|356608874|emb|CAFW01000013.1| 11134 12141 1 + 1008 Tyrosine recombinase XerD - none -
fig|6666666.67508.peg.2446 CDS gi|356608874|emb|CAFW01000013.1| 12334 13572 1 + 1239 FIG00546670: hypothetical protein - none -
fig|6666666.67508.peg.2447 CDS gi|356608874|emb|CAFW01000013.1| 13798 14670 1 + 873 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
RNA modification and chromosome partitioning cluster
fig|6666666.67508.peg.2448 CDS gi|356608874|emb|CAFW01000013.1| 14683 15504 1 + 822 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.67508.peg.2449 CDS gi|356608874|emb|CAFW01000013.1| 15514 16092 1 + 579 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.67508.peg.2450 CDS gi|356608874|emb|CAFW01000013.1| 16175 17110 2 + 936 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.67508.peg.2451 CDS gi|356608874|emb|CAFW01000013.1| 17111 17809 2 + 699 Cytidylate kinase (EC 2.7.4.14) - none -
fig|6666666.67508.peg.2452 CDS gi|356608874|emb|CAFW01000013.1| 17799 19415 3 + 1617 GTP-binding protein EngA - none -
fig|6666666.67508.peg.2453 CDS gi|356608874|emb|CAFW01000013.1| 21904 20456 -1 - 1449 Cell division inhibitor Persister Cells
fig|6666666.67508.peg.2454 CDS gi|356608874|emb|CAFW01000013.1| 21951 22079 3 + 129 hypothetical protein - none -
fig|6666666.67508.peg.2455 CDS gi|356608874|emb|CAFW01000013.1| 22217 22834 2 + 618 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67508.peg.2456 CDS gi|356608874|emb|CAFW01000013.1| 22844 23800 2 + 957 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.67508.peg.2457 CDS gi|356608874|emb|CAFW01000013.1| 23834 25180 2 + 1347 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.67508.peg.2458 CDS gi|356608874|emb|CAFW01000013.1| 25334 26488 2 + 1155 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67508.peg.2459 CDS gi|356608874|emb|CAFW01000013.1| 26519 29863 2 + 3345 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis
fig|6666666.67508.peg.2460 CDS gi|356608874|emb|CAFW01000013.1| 29844 30755 3 + 912 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.67508.peg.2461 CDS gi|356608874|emb|CAFW01000013.1| 31122 31244 3 + 123 integration host factor - none -
fig|6666666.67508.peg.2462 CDS gi|356608874|emb|CAFW01000013.1| 31252 31458 1 + 207 integration host factor - none -
fig|6666666.67508.peg.2463 CDS gi|356608874|emb|CAFW01000013.1| 31465 32034 1 + 570 Guanylate kinase (EC 2.7.4.8) Purine conversions
fig|6666666.67508.peg.2464 CDS gi|356608874|emb|CAFW01000013.1| 32078 32383 2 + 306 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.67508.peg.2465 CDS gi|356608874|emb|CAFW01000013.1| 32551 33825 1 + 1275 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.67508.peg.2466 CDS gi|356608874|emb|CAFW01000013.1| 34000 35223 1 + 1224 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.2467 CDS gi|356608874|emb|CAFW01000013.1| 35281 37356 1 + 2076 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.67508.peg.2468 CDS gi|356608874|emb|CAFW01000013.1| 37515 38024 3 + 510 Peptide deformylase (EC 3.5.1.88) Translation termination factors bacterial
fig|6666666.67508.peg.2469 CDS gi|356608908|emb|CAFW01000012.1| 33 416 3 + 384 Mobile element protein - none -
fig|6666666.67508.peg.2470 CDS gi|356608908|emb|CAFW01000012.1| 471 1148 3 + 678 hypothetical protein - none -
fig|6666666.67508.peg.2471 CDS gi|356608908|emb|CAFW01000012.1| 2092 1145 -1 - 948 hypothetical protein - none -
fig|6666666.67508.peg.2472 CDS gi|356608908|emb|CAFW01000012.1| 5118 2143 -3 - 2976 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.67508.peg.2473 CDS gi|356608908|emb|CAFW01000012.1| 5491 6123 1 + 633 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.67508.peg.2474 CDS gi|356608908|emb|CAFW01000012.1| 6608 6177 -2 - 432 hypothetical protein - none -
fig|6666666.67508.peg.2475 CDS gi|356608908|emb|CAFW01000012.1| 6847 7287 1 + 441 hypothetical protein - none -
fig|6666666.67508.peg.2476 CDS gi|356608908|emb|CAFW01000012.1| 7620 7417 -3 - 204 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.67508.peg.2477 CDS gi|356608908|emb|CAFW01000012.1| 7874 10216 2 + 2343 FIG00545284: hypothetical protein - none -
fig|6666666.67508.peg.2478 CDS gi|356608908|emb|CAFW01000012.1| 10536 10213 -3 - 324 hypothetical protein - none -
fig|6666666.67508.peg.2479 CDS gi|356608908|emb|CAFW01000012.1| 10850 10536 -2 - 315 FIG00544831: hypothetical protein - none -
fig|6666666.67508.peg.2480 CDS gi|356608908|emb|CAFW01000012.1| 11110 10889 -1 - 222 FIG043778: hypothetical protein - none -
fig|6666666.67508.peg.2481 CDS gi|356608908|emb|CAFW01000012.1| 11784 11155 -3 - 630 type II secretion system protein - none -
fig|6666666.67508.peg.2482 CDS gi|356608908|emb|CAFW01000012.1| 12615 11821 -3 - 795 FIG016317: Probable conserved transmembrane protein - none -
fig|6666666.67508.peg.2483 CDS gi|356608908|emb|CAFW01000012.1| 13901 12612 -2 - 1290 Flp pilus assembly protein, ATPase CpaF - none -
fig|6666666.67508.peg.2484 CDS gi|356608908|emb|CAFW01000012.1| 14950 13907 -1 - 1044 Septum site-determining protein MinD @ possible CpaE Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.67508.peg.2485 CDS gi|356608908|emb|CAFW01000012.1| 14939 15064 2 + 126 hypothetical protein - none -
fig|6666666.67508.peg.2486 CDS gi|356608908|emb|CAFW01000012.1| 15212 16108 2 + 897 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.67508.peg.2487 CDS gi|356608908|emb|CAFW01000012.1| 16360 16866 1 + 507 FIG00544230: hypothetical protein - none -
fig|6666666.67508.peg.2488 CDS gi|356608908|emb|CAFW01000012.1| 17089 17967 1 + 879 Epoxide hydrolase (EC 3.3.2.9) - none -
fig|6666666.67508.peg.2489 CDS gi|356608908|emb|CAFW01000012.1| 18173 19789 2 + 1617 putative peptide ABC transporter peptide-binding protein - none -
fig|6666666.67508.peg.2490 CDS gi|356608908|emb|CAFW01000012.1| 20344 21270 1 + 927 ABC-type transporter, permease component - none -
fig|6666666.67508.peg.2491 CDS gi|356608908|emb|CAFW01000012.1| 21263 22261 2 + 999 ABC-type transporter, permease component - none -
fig|6666666.67508.peg.2492 CDS gi|356608908|emb|CAFW01000012.1| 22264 23970 1 + 1707 putative peptide ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.2493 CDS gi|356608908|emb|CAFW01000012.1| 25314 24121 -3 - 1194 putative serine protease - none -
fig|6666666.67508.peg.2494 CDS gi|356608908|emb|CAFW01000012.1| 26080 25358 -1 - 723 Hypothetical nudix hydrolase YeaB Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67508.peg.2495 CDS gi|356608908|emb|CAFW01000012.1| 26746 26099 -1 - 648 Possible membrane-anchored thioredoxin-like protein - none -
fig|6666666.67508.peg.2496 CDS gi|356608908|emb|CAFW01000012.1| 27463 26822 -1 - 642 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.67508.peg.2497 CDS gi|356608908|emb|CAFW01000012.1| 27781 28464 1 + 684 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-479431.5.peg.3955;
cAMP signaling in bacteria
fig|6666666.67508.peg.2498 CDS gi|356608908|emb|CAFW01000012.1| 29473 28646 -1 - 828 FIG146518: Zn-dependent hydrolases, including glyoxylases CBSS-479431.5.peg.3955
fig|6666666.67508.peg.2499 CDS gi|356608908|emb|CAFW01000012.1| 29950 29492 -1 - 459 FIG137598: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67508.peg.2500 CDS gi|356608908|emb|CAFW01000012.1| 30109 29954 -1 - 156 FIG011121: hypothetical protein CBSS-479431.5.peg.3955
fig|6666666.67508.peg.2501 CDS gi|356608908|emb|CAFW01000012.1| 30481 30347 -1 - 135 WhiB-type transcription regulator WhiB and WhiB-type regulatory proteins
fig|6666666.67508.peg.2502 CDS gi|356608908|emb|CAFW01000012.1| 30832 33270 1 + 2439 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.67508.peg.2503 CDS gi|356608908|emb|CAFW01000012.1| 33840 33388 -3 - 453 Transamidase GatB domain protein - none -
fig|6666666.67508.peg.2504 CDS gi|356608908|emb|CAFW01000012.1| 33873 34769 3 + 897 putative secreted protein - none -
fig|6666666.67508.peg.2505 CDS gi|356608908|emb|CAFW01000012.1| 35505 34948 -3 - 558 possible transcriptional regulator, ROK family - none -
fig|6666666.67508.peg.2506 CDS gi|356608908|emb|CAFW01000012.1| 35585 35902 2 + 318 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67508.peg.2507 CDS gi|356608908|emb|CAFW01000012.1| 35899 36855 1 + 957 Alkanesulfonates-binding protein Alkanesulfonate assimilation;
Alkanesulfonates Utilization
fig|6666666.67508.peg.2508 CDS gi|356608908|emb|CAFW01000012.1| 36984 37142 3 + 159 hypothetical protein - none -
fig|6666666.67508.peg.2509 CDS gi|356608908|emb|CAFW01000012.1| 38023 37157 -1 - 867 Magnesium citrate secondary transporter - none -
fig|6666666.67508.peg.2510 CDS gi|356608908|emb|CAFW01000012.1| 38042 39061 2 + 1020 Transposase - none -
fig|6666666.67508.peg.2511 CDS gi|356608908|emb|CAFW01000012.1| 39632 39910 2 + 279 hypothetical protein - none -
fig|6666666.67508.peg.2512 CDS gi|356608908|emb|CAFW01000012.1| 41467 39914 -1 - 1554 FIG00544507: hypothetical protein - none -
fig|6666666.67508.peg.2513 CDS gi|356608908|emb|CAFW01000012.1| 43021 41486 -1 - 1536 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.67508.peg.2514 CDS gi|356608908|emb|CAFW01000012.1| 43260 43805 3 + 546 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein - none -
fig|6666666.67508.peg.2515 CDS gi|356608908|emb|CAFW01000012.1| 43968 44129 3 + 162 hypothetical protein - none -
fig|6666666.67508.peg.2516 CDS gi|356608908|emb|CAFW01000012.1| 44122 45657 1 + 1536 FIG00544530: hypothetical protein - none -
fig|6666666.67508.peg.2517 CDS gi|356608908|emb|CAFW01000012.1| 46874 45843 -2 - 1032 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67508.peg.2518 CDS gi|356608908|emb|CAFW01000012.1| 48244 46979 -1 - 1266 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.67508.peg.2519 CDS gi|356608908|emb|CAFW01000012.1| 48612 49523 3 + 912 FIG00544278: hypothetical protein - none -
fig|6666666.67508.peg.2520 CDS gi|356608908|emb|CAFW01000012.1| 50812 49520 -1 - 1293 FIG00546120: hypothetical protein - none -
fig|6666666.67508.peg.2521 CDS gi|356608908|emb|CAFW01000012.1| 51225 53042 3 + 1818 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.67508.peg.2522 CDS gi|356608908|emb|CAFW01000012.1| 53185 55050 1 + 1866 DNA polymerase III epsilon subunit DnaQ (EC 2.7.7.7) - none -
fig|6666666.67508.peg.2523 CDS gi|356608908|emb|CAFW01000012.1| 55227 56453 3 + 1227 proposed amino acid ligase found clustered with an amidotransferase - none -
fig|6666666.67508.peg.2524 CDS gi|356608908|emb|CAFW01000012.1| 56453 57211 2 + 759 Putative amidotransferase similar to cobyric acid synthase - none -
fig|6666666.67508.peg.2525 CDS gi|356608908|emb|CAFW01000012.1| 57321 59165 3 + 1845 putative ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.2526 CDS gi|356608908|emb|CAFW01000012.1| 59851 59195 -1 - 657 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.67508.peg.2527 CDS gi|356608908|emb|CAFW01000012.1| 60311 59967 -2 - 345 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.67508.peg.2528 CDS gi|356608908|emb|CAFW01000012.1| 63450 60436 -3 - 3015 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.67508.peg.2529 CDS gi|356608908|emb|CAFW01000012.1| 63950 63480 -2 - 471 FIG00544659: hypothetical protein - none -
fig|6666666.67508.peg.2530 CDS gi|356608908|emb|CAFW01000012.1| 65309 64038 -2 - 1272 Aspartate transaminase (EC 2.6.1.1) - none -
fig|6666666.67508.peg.2531 CDS gi|356608908|emb|CAFW01000012.1| 66384 66037 -3 - 348 FIG00544564: hypothetical protein - none -
fig|6666666.67508.peg.2532 CDS gi|356608908|emb|CAFW01000012.1| 67975 66413 -1 - 1563 Na+/H+ antiporter - none -
fig|6666666.67508.peg.2533 CDS gi|356608908|emb|CAFW01000012.1| 68865 68044 -3 - 822 glutamyl-Q-tRNA synthetase Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.2534 CDS gi|356608908|emb|CAFW01000012.1| 69103 69801 1 + 699 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.67508.peg.2535 CDS gi|356608908|emb|CAFW01000012.1| 71141 71013 -2 - 129 hypothetical protein - none -
fig|6666666.67508.peg.2536 CDS gi|356608908|emb|CAFW01000012.1| 71515 71294 -1 - 222 Mobile element protein - none -
fig|6666666.67508.peg.2537 CDS gi|356608968|emb|CAFW01000011.1| 2216 741 -2 - 1476 hypothetical protein - none -
fig|6666666.67508.peg.2538 CDS gi|356608968|emb|CAFW01000011.1| 2331 3521 3 + 1191 FIG00545356: hypothetical protein - none -
fig|6666666.67508.peg.2539 CDS gi|356608968|emb|CAFW01000011.1| 4847 5152 2 + 306 FIG00545356: hypothetical protein - none -
fig|6666666.67508.peg.2540 CDS gi|356608968|emb|CAFW01000011.1| 5375 5491 2 + 117 hypothetical protein - none -
fig|6666666.67508.peg.2541 CDS gi|356608968|emb|CAFW01000011.1| 5496 6188 3 + 693 two-component system response regulator - none -
fig|6666666.67508.peg.2542 CDS gi|356608968|emb|CAFW01000011.1| 7402 6560 -1 - 843 hypothetical protein - none -
fig|6666666.67508.peg.2543 CDS gi|356608968|emb|CAFW01000011.1| 8052 8777 3 + 726 FIG00544716: hypothetical protein - none -
fig|6666666.67508.peg.2544 CDS gi|356608968|emb|CAFW01000011.1| 8774 10408 2 + 1635 DNA polymerase-like protein PA0670 - none -
fig|6666666.67508.peg.2545 CDS gi|356608968|emb|CAFW01000011.1| 10965 10405 -3 - 561 No significant database matches - none -
fig|6666666.67508.peg.2546 CDS gi|356608968|emb|CAFW01000011.1| 11058 11957 3 + 900 FIG00546271: hypothetical protein - none -
fig|6666666.67508.peg.2547 CDS gi|356608968|emb|CAFW01000011.1| 12685 12005 -1 - 681 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.2548 CDS gi|356608968|emb|CAFW01000011.1| 13722 12682 -3 - 1041 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.2549 CDS gi|356608968|emb|CAFW01000011.1| 14689 13787 -1 - 903 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.67508.peg.2550 CDS gi|356608968|emb|CAFW01000011.1| 15126 18116 3 + 2991 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.67508.peg.2551 CDS gi|356608968|emb|CAFW01000011.1| 20088 18532 -3 - 1557 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67508.peg.2552 CDS gi|356608968|emb|CAFW01000011.1| 21527 20085 -2 - 1443 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67508.peg.2553 CDS gi|356608968|emb|CAFW01000011.1| 22639 21638 -1 - 1002 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67508.peg.2554 CDS gi|356608968|emb|CAFW01000011.1| 24183 22642 -3 - 1542 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.67508.peg.2555 CDS gi|356608968|emb|CAFW01000011.1| 24708 25187 3 + 480 transmembrane protein, distant homology with ydbS Folate biosynthesis cluster
fig|6666666.67508.peg.2556 CDS gi|356608968|emb|CAFW01000011.1| 25184 26659 2 + 1476 transmembrane protein, distant homology with ydbT - none -
fig|6666666.67508.peg.2557 CDS gi|356608968|emb|CAFW01000011.1| 27135 26683 -3 - 453 tRNA (cytosine34-2@1-O-)-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.67508.peg.2558 CDS gi|356608968|emb|CAFW01000011.1| 27174 28019 3 + 846 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67508.peg.2559 CDS gi|356608968|emb|CAFW01000011.1| 28043 28360 2 + 318 FIG00545460: hypothetical protein - none -
fig|6666666.67508.peg.2560 CDS gi|356608968|emb|CAFW01000011.1| 29541 28399 -3 - 1143 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.67508.peg.2561 CDS gi|356608968|emb|CAFW01000011.1| 30854 29541 -2 - 1314 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.67508.peg.2562 CDS gi|356608968|emb|CAFW01000011.1| 32173 30965 -1 - 1209 putative membrane protein - none -
fig|6666666.67508.peg.2563 CDS gi|356608968|emb|CAFW01000011.1| 32793 32170 -3 - 624 FIG00547129: hypothetical protein - none -
fig|6666666.67508.peg.2564 CDS gi|356608968|emb|CAFW01000011.1| 32929 33408 1 + 480 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.67508.peg.2565 CDS gi|356608968|emb|CAFW01000011.1| 33880 34038 1 + 159 hypothetical protein - none -
fig|6666666.67508.peg.2566 CDS gi|356608968|emb|CAFW01000011.1| 36174 34054 -3 - 2121 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.67508.peg.2567 CDS gi|356608968|emb|CAFW01000011.1| 38481 36307 -3 - 2175 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.67508.peg.2568 CDS gi|356608968|emb|CAFW01000011.1| 39683 38724 -2 - 960 FIG00544109: hypothetical protein - none -
fig|6666666.67508.peg.2569 CDS gi|356608968|emb|CAFW01000011.1| 40539 39691 -3 - 849 putative iron transporter ATP-binding protein - none -
fig|6666666.67508.peg.2570 CDS gi|356608968|emb|CAFW01000011.1| 41626 40547 -1 - 1080 ABC-type transporter, permease component - none -
fig|6666666.67508.peg.2571 CDS gi|356608968|emb|CAFW01000011.1| 42600 41626 -3 - 975 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.67508.peg.2572 CDS gi|356608968|emb|CAFW01000011.1| 43890 42784 -3 - 1107 Iron compound ABC uptake transporter substrate-binding protein PiaA Heme, hemin uptake and utilization systems in GramPositives
fig|6666666.67508.peg.2573 CDS gi|356608968|emb|CAFW01000011.1| 44128 45471 1 + 1344 putative transport protein - none -
fig|6666666.67508.peg.2574 CDS gi|356608968|emb|CAFW01000011.1| 45592 46500 1 + 909 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.67508.peg.2575 CDS gi|356608968|emb|CAFW01000011.1| 46655 46846 2 + 192 FIG00544199: hypothetical protein - none -
fig|6666666.67508.peg.2576 CDS gi|356608968|emb|CAFW01000011.1| 47038 48081 1 + 1044 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.67508.peg.2577 CDS gi|356608968|emb|CAFW01000011.1| 48135 49220 3 + 1086 putative membrane protein - none -
fig|6666666.67508.peg.2578 CDS gi|356608968|emb|CAFW01000011.1| 49809 49657 -3 - 153 hypothetical protein - none -
fig|6666666.67508.peg.2579 CDS gi|356608968|emb|CAFW01000011.1| 51768 50278 -3 - 1491 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.67508.peg.2580 CDS gi|356608968|emb|CAFW01000011.1| 51799 52740 1 + 942 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.67508.peg.2581 CDS gi|356608968|emb|CAFW01000011.1| 52791 53906 3 + 1116 FIG00544225: hypothetical protein - none -
fig|6666666.67508.peg.2582 CDS gi|356608968|emb|CAFW01000011.1| 53916 55046 3 + 1131 FIG00544225: hypothetical protein - none -
fig|6666666.67508.peg.2583 CDS gi|356608968|emb|CAFW01000011.1| 56281 55043 -1 - 1239 FIG026501: hypothetical protein - none -
fig|6666666.67508.peg.2584 CDS gi|356608968|emb|CAFW01000011.1| 57278 56304 -2 - 975 FIG00544549: hypothetical protein - none -
fig|6666666.67508.peg.2585 CDS gi|356608968|emb|CAFW01000011.1| 57574 57281 -1 - 294 FIG00544463: hypothetical protein - none -
fig|6666666.67508.peg.2586 CDS gi|356608968|emb|CAFW01000011.1| 57634 58269 1 + 636 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.67508.peg.2587 CDS gi|356608968|emb|CAFW01000011.1| 58456 58935 1 + 480 predicted transcriptional regulator - none -
fig|6666666.67508.peg.2588 CDS gi|356608968|emb|CAFW01000011.1| 59113 60324 1 + 1212 N-acyl-L-amino acid amidohydrolase - none -
fig|6666666.67508.peg.2589 CDS gi|356608968|emb|CAFW01000011.1| 60460 61887 1 + 1428 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.67508.peg.2590 CDS gi|356608968|emb|CAFW01000011.1| 62998 62207 -1 - 792 FIG00544446: hypothetical protein - none -
fig|6666666.67508.peg.2591 CDS gi|356608968|emb|CAFW01000011.1| 63060 63464 3 + 405 hypothetical protein - none -
fig|6666666.67508.peg.2592 CDS gi|356608968|emb|CAFW01000011.1| 64490 63657 -2 - 834 FIG00544446: hypothetical protein - none -
fig|6666666.67508.peg.2593 CDS gi|356608968|emb|CAFW01000011.1| 65537 64725 -2 - 813 hypothetical protein - none -
fig|6666666.67508.peg.2594 CDS gi|356608968|emb|CAFW01000011.1| 66936 65611 -3 - 1326 Transcriptional regulator, XRE family - none -
fig|6666666.67508.peg.2595 CDS gi|356608968|emb|CAFW01000011.1| 67080 68624 3 + 1545 2-methylcitrate dehydratase (EC 4.2.1.79) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67508.peg.2596 CDS gi|356608968|emb|CAFW01000011.1| 68625 69554 3 + 930 Methylisocitrate lyase (EC 4.1.3.30) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67508.peg.2597 CDS gi|356608968|emb|CAFW01000011.1| 69565 70713 1 + 1149 2-methylcitrate synthase (EC 2.3.3.5) Methylcitrate cycle;
Propionate-CoA to Succinate Module
fig|6666666.67508.peg.2598 CDS gi|356608968|emb|CAFW01000011.1| 71199 74630 3 + 3432 Pyruvate carboxyl transferase (EC 6.4.1.1) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.67508.peg.2599 CDS gi|356608968|emb|CAFW01000011.1| 75325 74744 -1 - 582 FIG00545040: hypothetical protein - none -
fig|6666666.67508.peg.2600 CDS gi|356608968|emb|CAFW01000011.1| 75809 76792 2 + 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67508.peg.2601 CDS gi|356608968|emb|CAFW01000011.1| 76793 77881 2 + 1089 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67508.peg.2602 CDS gi|356608968|emb|CAFW01000011.1| 77878 79794 1 + 1917 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67508.peg.2603 CDS gi|356608968|emb|CAFW01000011.1| 79885 81594 1 + 1710 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67508.peg.2604 CDS gi|356608968|emb|CAFW01000011.1| 81742 81858 1 + 117 hypothetical protein - none -
fig|6666666.67508.peg.2605 CDS gi|356608968|emb|CAFW01000011.1| 82020 84350 3 + 2331 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.67508.peg.2606 CDS gi|356608968|emb|CAFW01000011.1| 86234 84459 -2 - 1776 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.67508.peg.2607 CDS gi|356608968|emb|CAFW01000011.1| 87345 86467 -3 - 879 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) - none -
fig|6666666.67508.peg.2608 CDS gi|356608968|emb|CAFW01000011.1| 87713 88792 2 + 1080 FIG00548218: hypothetical protein - none -
fig|6666666.67508.peg.2609 CDS gi|356608968|emb|CAFW01000011.1| 90395 88839 -2 - 1557 Choline dehydrogenase (EC 1.1.99.1) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.2610 CDS gi|356608968|emb|CAFW01000011.1| 91928 90441 -2 - 1488 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.2611 CDS gi|356608968|emb|CAFW01000011.1| 94167 91945 -3 - 2223 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.2612 CDS gi|356608968|emb|CAFW01000011.1| 94424 94600 2 + 177 hypothetical protein - none -
fig|6666666.67508.peg.2613 CDS gi|356608968|emb|CAFW01000011.1| 94601 95530 2 + 930 hypothetical protein - none -
fig|6666666.67508.peg.2614 CDS gi|356608968|emb|CAFW01000011.1| 95677 96279 1 + 603 ABC-type multidrug transport system, permease component CBSS-196164.1.peg.1690
fig|6666666.67508.peg.2615 CDS gi|356608968|emb|CAFW01000011.1| 97174 96341 -1 - 834 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.67508.peg.2616 CDS gi|356608968|emb|CAFW01000011.1| 97695 97246 -3 - 450 FIG00547406: hypothetical protein - none -
fig|6666666.67508.peg.2617 CDS gi|356608968|emb|CAFW01000011.1| 98381 97719 -2 - 663 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.67508.peg.2618 CDS gi|356608968|emb|CAFW01000011.1| 98821 98558 -1 - 264 FIG00544173: hypothetical protein - none -
fig|6666666.67508.peg.2619 CDS gi|356608968|emb|CAFW01000011.1| 100519 98960 -1 - 1560 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.67508.peg.2620 CDS gi|356608968|emb|CAFW01000011.1| 102256 100640 -1 - 1617 Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Serine-glyoxylate cycle
fig|6666666.67508.peg.2621 CDS gi|356608968|emb|CAFW01000011.1| 104265 102625 -3 - 1641 Trehalose synthase (EC 5.4.99.16) Trehalose Biosynthesis
fig|6666666.67508.peg.2622 CDS gi|356608968|emb|CAFW01000011.1| 104486 104262 -2 - 225 hypothetical protein - none -
fig|6666666.67508.peg.2623 CDS gi|356608968|emb|CAFW01000011.1| 105325 104489 -1 - 837 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.67508.peg.2624 CDS gi|356608968|emb|CAFW01000011.1| 106455 105325 -3 - 1131 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.67508.peg.2625 CDS gi|356608968|emb|CAFW01000011.1| 106854 108110 3 + 1257 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) Pyruvate Alanine Serine Interconversions;
Respiratory dehydrogenases 1
fig|6666666.67508.peg.2626 CDS gi|356608968|emb|CAFW01000011.1| 109564 108254 -1 - 1311 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.67508.peg.2627 CDS gi|356608968|emb|CAFW01000011.1| 109715 110545 2 + 831 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.67508.peg.2628 CDS gi|356608968|emb|CAFW01000011.1| 110579 111046 2 + 468 FIG00545249: hypothetical protein - none -
fig|6666666.67508.peg.2629 CDS gi|356608968|emb|CAFW01000011.1| 111257 111625 2 + 369 hypothetical protein - none -
fig|6666666.67508.peg.2630 CDS gi|356608968|emb|CAFW01000011.1| 112346 111663 -2 - 684 Alpha-acetolactate decarboxylase (EC 4.1.1.5) Acetoin, butanediol metabolism
fig|6666666.67508.peg.2631 CDS gi|356608968|emb|CAFW01000011.1| 112419 113639 3 + 1221 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67508.peg.2632 CDS gi|356608968|emb|CAFW01000011.1| 113691 114194 3 + 504 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.67508.peg.2633 CDS gi|356608968|emb|CAFW01000011.1| 114207 114674 3 + 468 FIG00546022: hypothetical protein - none -
fig|6666666.67508.peg.2634 CDS gi|356608968|emb|CAFW01000011.1| 115018 116070 1 + 1053 sodium-dependent transporter - none -
fig|6666666.67508.peg.2635 CDS gi|356608968|emb|CAFW01000011.1| 116537 118192 2 + 1656 Probable solute-binding protein of ABC transporter for peptides - none -
fig|6666666.67508.peg.2636 CDS gi|356608968|emb|CAFW01000011.1| 118261 119340 1 + 1080 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67508.peg.2637 CDS gi|356608968|emb|CAFW01000011.1| 119347 120351 1 + 1005 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67508.peg.2638 CDS gi|356608968|emb|CAFW01000011.1| 120344 122134 2 + 1791 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67508.peg.2639 CDS gi|356608968|emb|CAFW01000011.1| 123255 122131 -3 - 1125 FIG00543986: hypothetical protein - none -
fig|6666666.67508.peg.2640 CDS gi|356608968|emb|CAFW01000011.1| 124017 123298 -3 - 720 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.2641 CDS gi|356608968|emb|CAFW01000011.1| 124389 125084 3 + 696 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.2642 CDS gi|356608968|emb|CAFW01000011.1| 125114 125803 2 + 690 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.2643 CDS gi|356608968|emb|CAFW01000011.1| 125833 127089 1 + 1257 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.2644 CDS gi|356608968|emb|CAFW01000011.1| 127064 127477 2 + 414 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Protocatechuate branch of beta-ketoadipate pathway
fig|6666666.67508.peg.2645 CDS gi|356608968|emb|CAFW01000011.1| 127484 129346 2 + 1863 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) - none -
fig|6666666.67508.peg.2646 CDS gi|356608968|emb|CAFW01000011.1| 129383 130252 2 + 870 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.67508.peg.2647 CDS gi|356608968|emb|CAFW01000011.1| 130295 131083 2 + 789 FIG00545377: hypothetical protein - none -
fig|6666666.67508.peg.2648 CDS gi|356608968|emb|CAFW01000011.1| 131341 131658 1 + 318 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - none -
fig|6666666.67508.peg.2649 CDS gi|356608968|emb|CAFW01000011.1| 132012 132413 3 + 402 hypothetical protein - none -
fig|6666666.67508.peg.2650 CDS gi|356608968|emb|CAFW01000011.1| 132413 133690 2 + 1278 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.67508.peg.2651 CDS gi|356608968|emb|CAFW01000011.1| 133703 134734 2 + 1032 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.67508.peg.2652 CDS gi|356608968|emb|CAFW01000011.1| 135987 134746 -3 - 1242 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) - none -
fig|6666666.67508.peg.2653 CDS gi|356608968|emb|CAFW01000011.1| 136416 138302 3 + 1887 Ectoine, glycine betaine and proline transport system membrane protein - none -
fig|6666666.67508.peg.2654 CDS gi|356608968|emb|CAFW01000011.1| 139053 138412 -3 - 642 secreted hydrolase - none -
fig|6666666.67508.peg.2655 CDS gi|356608968|emb|CAFW01000011.1| 139861 139313 -1 - 549 hypothetical protein - none -
fig|6666666.67508.peg.2656 CDS gi|356608968|emb|CAFW01000011.1| 141917 139920 -2 - 1998 FIG00544299: hypothetical protein - none -
fig|6666666.67508.peg.2657 CDS gi|356608968|emb|CAFW01000011.1| 142390 144204 1 + 1815 Hydroxymethylpyrimidine phosphate synthase ThiC - none -
fig|6666666.67508.peg.2658 CDS gi|356608968|emb|CAFW01000011.1| 145172 144252 -2 - 921 Periplasmic binding protein - none -
fig|6666666.67508.peg.2659 CDS gi|356608968|emb|CAFW01000011.1| 145382 146134 2 + 753 FIG00545943: hypothetical protein - none -
fig|6666666.67508.peg.2660 CDS gi|356608968|emb|CAFW01000011.1| 146990 146118 -2 - 873 FIG00548151: hypothetical protein - none -
fig|6666666.67508.peg.2661 CDS gi|356608968|emb|CAFW01000011.1| 147582 146995 -3 - 588 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67508.peg.2662 CDS gi|356608968|emb|CAFW01000011.1| 147726 149258 3 + 1533 4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) Polyamine Metabolism;
Putrescine utilization pathways
fig|6666666.67508.peg.2663 CDS gi|356608968|emb|CAFW01000011.1| 150127 149366 -1 - 762 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.2664 CDS gi|356608968|emb|CAFW01000011.1| 151488 150574 -3 - 915 Ornithine cyclodeaminase (EC 4.3.1.12) - none -
fig|6666666.67508.peg.2665 CDS gi|356608968|emb|CAFW01000011.1| 151980 152129 3 + 150 hypothetical protein - none -
fig|6666666.67508.peg.2666 CDS gi|356608968|emb|CAFW01000011.1| 152244 152660 3 + 417 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.67508.peg.2667 CDS gi|356608968|emb|CAFW01000011.1| 152657 152791 2 + 135 hypothetical protein - none -
fig|6666666.67508.peg.2668 CDS gi|356608968|emb|CAFW01000011.1| 154842 152902 -3 - 1941 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.2669 CDS gi|356608968|emb|CAFW01000011.1| 155650 155300 -1 - 351 Mobile element protein - none -
fig|6666666.67508.peg.2670 CDS gi|356609099|emb|CAFW01000010.1| 553 729 1 + 177 Mobile element protein - none -
fig|6666666.67508.peg.2671 CDS gi|356609099|emb|CAFW01000010.1| 910 758 -1 - 153 hypothetical protein - none -
fig|6666666.67508.peg.2672 CDS gi|356609099|emb|CAFW01000010.1| 1417 1620 1 + 204 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.67508.peg.2673 CDS gi|356609099|emb|CAFW01000010.1| 1617 2924 3 + 1308 Cytosine permease Creatine and Creatinine Degradation
fig|6666666.67508.peg.2674 CDS gi|356609099|emb|CAFW01000010.1| 4151 3210 -2 - 942 hypothetical protein - none -
fig|6666666.67508.peg.2675 CDS gi|356609099|emb|CAFW01000010.1| 5929 4337 -1 - 1593 putative transport protein - none -
fig|6666666.67508.peg.2676 CDS gi|356609099|emb|CAFW01000010.1| 6150 6473 3 + 324 Mobile element protein - none -
fig|6666666.67508.peg.2677 CDS gi|356609099|emb|CAFW01000010.1| 7665 7432 -3 - 234 Mobile element protein - none -
fig|6666666.67508.peg.2678 CDS gi|356609104|emb|CAFW01000009.1| 33 374 3 + 342 Transposase - none -
fig|6666666.67508.peg.2679 CDS gi|356609104|emb|CAFW01000009.1| 1375 431 -1 - 945 hypothetical protein - none -
fig|6666666.67508.peg.2680 CDS gi|356609104|emb|CAFW01000009.1| 2414 1368 -2 - 1047 hypothetical protein - none -
fig|6666666.67508.peg.2681 CDS gi|356609104|emb|CAFW01000009.1| 3097 2942 -1 - 156 hypothetical protein - none -
fig|6666666.67508.peg.2682 CDS gi|356609104|emb|CAFW01000009.1| 6445 3287 -1 - 3159 DNA/RNA helicase of DEAD/DEAH box family - none -
fig|6666666.67508.peg.2683 CDS gi|356609104|emb|CAFW01000009.1| 6783 6442 -3 - 342 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.67508.peg.2684 CDS gi|356609104|emb|CAFW01000009.1| 7275 6883 -3 - 393 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.67508.peg.2685 CDS gi|356609104|emb|CAFW01000009.1| 8179 7268 -1 - 912 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67508.peg.2686 CDS gi|356609104|emb|CAFW01000009.1| 9124 8180 -1 - 945 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.67508.peg.2687 CDS gi|356609104|emb|CAFW01000009.1| 10209 9223 -3 - 987 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.67508.peg.2688 CDS gi|356609104|emb|CAFW01000009.1| 11786 10206 -2 - 1581 ABC-type sugar transport system, ATP-binding protein (EC 3.6.3.17) - none -
fig|6666666.67508.peg.2689 CDS gi|356609104|emb|CAFW01000009.1| 12803 11811 -2 - 993 transcriptional regulator - none -
fig|6666666.67508.peg.2690 CDS gi|356609104|emb|CAFW01000009.1| 13116 14297 3 + 1182 arsenical pump membrane protein - none -
fig|6666666.67508.peg.2691 CDS gi|356609104|emb|CAFW01000009.1| 14393 14770 2 + 378 hypothetical protein - none -
fig|6666666.67508.peg.2692 CDS gi|356609104|emb|CAFW01000009.1| 14821 15672 1 + 852 hypothetical protein - none -
fig|6666666.67508.peg.2693 CDS gi|356609104|emb|CAFW01000009.1| 15665 16552 2 + 888 Nudix hydrolase family protein - none -
fig|6666666.67508.peg.2694 CDS gi|356609104|emb|CAFW01000009.1| 18580 17135 -1 - 1446 hypothetical protein - none -
fig|6666666.67508.peg.2695 CDS gi|356609104|emb|CAFW01000009.1| 18702 20015 3 + 1314 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Putrescine utilization pathways
fig|6666666.67508.peg.2696 CDS gi|356609104|emb|CAFW01000009.1| 20100 21338 3 + 1239 FIG00546601: hypothetical protein - none -
fig|6666666.67508.peg.2697 CDS gi|356609104|emb|CAFW01000009.1| 22956 21340 -3 - 1617 Acetohydroxy acid synthase - none -
fig|6666666.67508.peg.2698 CDS gi|356609104|emb|CAFW01000009.1| 23984 22986 -2 - 999 Agmatinase (EC 3.5.3.11) Polyamine Metabolism
fig|6666666.67508.peg.2699 CDS gi|356609104|emb|CAFW01000009.1| 24586 24017 -1 - 570 Transcription regulator - none -
fig|6666666.67508.peg.2700 CDS gi|356609104|emb|CAFW01000009.1| 24743 26323 2 + 1581 sodium-solute symporter, putative - none -
fig|6666666.67508.peg.2701 CDS gi|356609104|emb|CAFW01000009.1| 27463 26327 -1 - 1137 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.67508.peg.2702 CDS gi|356609104|emb|CAFW01000009.1| 28336 27473 -1 - 864 glutamate-binding protein GluB - none -
fig|6666666.67508.peg.2703 CDS gi|356609104|emb|CAFW01000009.1| 29938 28352 -1 - 1587 Na(+)-linked D-alanine glycine permease - none -
fig|6666666.67508.peg.2704 CDS gi|356609104|emb|CAFW01000009.1| 30136 30846 1 + 711 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.2705 CDS gi|356609104|emb|CAFW01000009.1| 31021 32211 1 + 1191 sarcosine oxidase subunit beta - none -
fig|6666666.67508.peg.2706 CDS gi|356609104|emb|CAFW01000009.1| 32237 33637 2 + 1401 Uncharacterized protein Rv3292/MT3391 - none -
fig|6666666.67508.peg.2707 CDS gi|356609104|emb|CAFW01000009.1| 33679 35202 1 + 1524 Aldehyde dehydrogenase B (EC 1.2.1.22) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.67508.peg.2708 CDS gi|356609104|emb|CAFW01000009.1| 35366 36718 2 + 1353 hypothetical protein - none -
fig|6666666.67508.peg.2709 CDS gi|356609104|emb|CAFW01000009.1| 37666 37001 -1 - 666 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.2710 CDS gi|356609104|emb|CAFW01000009.1| 37958 40759 2 + 2802 Fe-S protein, homolog of lactate dehydrogenase SO1521 - none -
fig|6666666.67508.peg.2711 CDS gi|356609104|emb|CAFW01000009.1| 42174 40771 -3 - 1404 L-Proline/Glycine betaine transporter ProP Proline, 4-hydroxyproline uptake and utilization
fig|6666666.67508.peg.2712 CDS gi|356609104|emb|CAFW01000009.1| 42326 43471 2 + 1146 regulator of polyketide synthase expression - none -
fig|6666666.67508.peg.2713 CDS gi|356609104|emb|CAFW01000009.1| 45814 43757 -1 - 2058 possible membrane protein - none -
fig|6666666.67508.peg.2714 CDS gi|356609104|emb|CAFW01000009.1| 47221 45842 -1 - 1380 PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.67508.peg.2715 CDS gi|356609104|emb|CAFW01000009.1| 47395 47237 -1 - 159 hypothetical protein - none -
fig|6666666.67508.peg.2716 CDS gi|356609104|emb|CAFW01000009.1| 47519 47352 -2 - 168 PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.67508.peg.2717 CDS gi|356609104|emb|CAFW01000009.1| 48876 47608 -3 - 1269 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.67508.peg.2718 CDS gi|356609104|emb|CAFW01000009.1| 49095 50264 3 + 1170 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Acetyl-CoA fermentation to Butyrate;
Biotin biosynthesis;
Butanol Biosynthesis;
Fatty acid metabolism cluster;
Isoprenoid Biosynthesis;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.67508.peg.2719 CDS gi|356609104|emb|CAFW01000009.1| 50277 51305 3 + 1029 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) - none -
fig|6666666.67508.peg.2720 CDS gi|356609104|emb|CAFW01000009.1| 51317 52090 2 + 774 Enoyl-CoA hydratase [branched-chain amino acid degradation] (EC 4.2.1.17) Dehydrogenase complexes
fig|6666666.67508.peg.2721 CDS gi|356609104|emb|CAFW01000009.1| 52610 52077 -2 - 534 MarR-family transcriptional regulator - none -
fig|6666666.67508.peg.2722 CDS gi|356609104|emb|CAFW01000009.1| 54383 52653 -2 - 1731 Acetyl-coenzyme A synthetase (EC 6.2.1.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.2723 CDS gi|356609104|emb|CAFW01000009.1| 54790 54530 -1 - 261 hypothetical protein - none -
fig|6666666.67508.peg.2724 CDS gi|356609104|emb|CAFW01000009.1| 55241 56449 2 + 1209 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) - none -
fig|6666666.67508.peg.2725 CDS gi|356609104|emb|CAFW01000009.1| 57564 56446 -3 - 1119 NAD-independent protein deacetylase AcuC Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.2726 CDS gi|356609104|emb|CAFW01000009.1| 60230 57576 -2 - 2655 Protein acetyltransferase Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.67508.peg.2727 CDS gi|356609104|emb|CAFW01000009.1| 60411 61928 3 + 1518 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) - none -
fig|6666666.67508.peg.2728 CDS gi|356609104|emb|CAFW01000009.1| 61943 62824 2 + 882 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) - none -
fig|6666666.67508.peg.2729 CDS gi|356609104|emb|CAFW01000009.1| 63365 62805 -2 - 561 probable transcriptional regulator - none -
fig|6666666.67508.peg.2730 CDS gi|356609104|emb|CAFW01000009.1| 63423 64883 3 + 1461 D-beta-hydroxybutyrate permease - none -
fig|6666666.67508.peg.2731 CDS gi|356609104|emb|CAFW01000009.1| 65847 64864 -3 - 984 putative ammonia monooxygenase - none -
fig|6666666.67508.peg.2732 CDS gi|356609104|emb|CAFW01000009.1| 66365 65898 -2 - 468 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.67508.peg.2733 CDS gi|356609104|emb|CAFW01000009.1| 68867 66396 -2 - 2472 Aconitate hydratase (EC 4.2.1.3) Propionate-CoA to Succinate Module;
Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.67508.peg.2734 CDS gi|356609104|emb|CAFW01000009.1| 68965 69618 1 + 654 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.2735 CDS gi|356609104|emb|CAFW01000009.1| 69750 70739 3 + 990 Tricarboxylate transport protein TctC Tricarboxylate transport cassette;
Tricarboxylate transport system
fig|6666666.67508.peg.2736 CDS gi|356609104|emb|CAFW01000009.1| 70751 71326 2 + 576 Tricarboxylate transport protein TctB Tricarboxylate transport cassette;
Tricarboxylate transport system
fig|6666666.67508.peg.2737 CDS gi|356609104|emb|CAFW01000009.1| 71329 72867 1 + 1539 Tricarboxylate transport membrane protein TctA Tricarboxylate transport cassette;
Tricarboxylate transport system
fig|6666666.67508.peg.2738 CDS gi|356609104|emb|CAFW01000009.1| 74289 72910 -3 - 1380 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) - none -
fig|6666666.67508.peg.2739 CDS gi|356609104|emb|CAFW01000009.1| 74694 76094 3 + 1401 hypothetical protein - none -
fig|6666666.67508.peg.2740 CDS gi|356609104|emb|CAFW01000009.1| 76280 76798 2 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.67508.peg.2741 CDS gi|356609104|emb|CAFW01000009.1| 78146 76767 -2 - 1380 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.67508.peg.2742 CDS gi|356609104|emb|CAFW01000009.1| 78220 78549 1 + 330 Inner membrane protein - none -
fig|6666666.67508.peg.2743 CDS gi|356609104|emb|CAFW01000009.1| 78615 78866 3 + 252 hypothetical protein - none -
fig|6666666.67508.peg.2744 CDS gi|356609104|emb|CAFW01000009.1| 78952 79845 1 + 894 FIG00544655: hypothetical protein - none -
fig|6666666.67508.peg.2745 CDS gi|356609104|emb|CAFW01000009.1| 79851 80459 3 + 609 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.67508.peg.2746 CDS gi|356609104|emb|CAFW01000009.1| 80506 80967 1 + 462 Iojap protein - none -
fig|6666666.67508.peg.2747 CDS gi|356609104|emb|CAFW01000009.1| 81039 81677 3 + 639 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.67508.peg.2748 CDS gi|356609104|emb|CAFW01000009.1| 81677 82468 2 + 792 Hypothetical protein DUF194, DegV family - none -
fig|6666666.67508.peg.2749 CDS gi|356609104|emb|CAFW01000009.1| 82581 83276 3 + 696 FIG00545717: hypothetical protein - none -
fig|6666666.67508.peg.2750 CDS gi|356609104|emb|CAFW01000009.1| 83283 84899 3 + 1617 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.67508.peg.2751 CDS gi|356609104|emb|CAFW01000009.1| 85327 84896 -1 - 432 Uncharacterized conserved protein - none -
fig|6666666.67508.peg.2752 CDS gi|356609104|emb|CAFW01000009.1| 85367 86329 2 + 963 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.67508.peg.2753 CDS gi|356609104|emb|CAFW01000009.1| 86340 86726 3 + 387 ankyrin repeat containing protein - none -
fig|6666666.67508.peg.2754 CDS gi|356609104|emb|CAFW01000009.1| 86723 87373 2 + 651 L-lysine permease - none -
fig|6666666.67508.peg.2755 CDS gi|356609104|emb|CAFW01000009.1| 88692 87370 -3 - 1323 Mu-like prophage protein gp29 - none -
fig|6666666.67508.peg.2756 CDS gi|356609104|emb|CAFW01000009.1| 89515 88676 -1 - 840 DNA adenine methylase( EC:2.1.1.72 ) - none -
fig|6666666.67508.peg.2757 CDS gi|356609104|emb|CAFW01000009.1| 89898 89635 -3 - 264 SSU ribosomal protein S20p - none -
fig|6666666.67508.peg.2758 CDS gi|356609104|emb|CAFW01000009.1| 90631 90086 -1 - 546 RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4) RNA 3@1-terminal phosphate cyclase
fig|6666666.67508.peg.2759 CDS gi|356609104|emb|CAFW01000009.1| 90715 92562 1 + 1848 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.67508.peg.2760 CDS gi|356609104|emb|CAFW01000009.1| 92583 94025 3 + 1443 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.67508.peg.2761 CDS gi|356609104|emb|CAFW01000009.1| 95908 94022 -1 - 1887 High-affinity choline uptake protein BetT Choline and Betaine Uptake and Betaine Biosynthesis;
Choline uptake and conversion to betaine clusters;
Niacin-Choline transport and metabolism
fig|6666666.67508.peg.2762 CDS gi|356609104|emb|CAFW01000009.1| 96417 96019 -3 - 399 hypothetical protein - none -
fig|6666666.67508.peg.2763 CDS gi|356609104|emb|CAFW01000009.1| 96523 96681 1 + 159 hypothetical protein - none -
fig|6666666.67508.peg.2764 CDS gi|356609104|emb|CAFW01000009.1| 98138 96693 -2 - 1446 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.67508.peg.2765 CDS gi|356609104|emb|CAFW01000009.1| 98974 98141 -1 - 834 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67508.peg.2766 CDS gi|356609104|emb|CAFW01000009.1| 99918 98971 -3 - 948 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.67508.peg.2767 CDS gi|356609104|emb|CAFW01000009.1| 101303 99915 -2 - 1389 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2);
Bacterial Chemotaxis
fig|6666666.67508.peg.2768 CDS gi|356609104|emb|CAFW01000009.1| 102273 101500 -3 - 774 Transcriptional regulator, GntR family - none -
fig|6666666.67508.peg.2769 CDS gi|356609104|emb|CAFW01000009.1| 104282 103242 -2 - 1041 FIG00546389: hypothetical protein - none -
fig|6666666.67508.peg.2770 CDS gi|356609104|emb|CAFW01000009.1| 105775 104396 -1 - 1380 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.67508.peg.2771 CDS gi|356609104|emb|CAFW01000009.1| 107074 105902 -1 - 1173 Cystathionine beta-lyase, type II (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.67508.peg.2772 CDS gi|356609104|emb|CAFW01000009.1| 108997 107105 -1 - 1893 putative ABC transporter ATP-binding protein - none -
fig|6666666.67508.peg.2773 CDS gi|356609104|emb|CAFW01000009.1| 109150 109707 1 + 558 FIG00545146: hypothetical protein - none -
fig|6666666.67508.peg.2774 CDS gi|356609104|emb|CAFW01000009.1| 109704 110258 3 + 555 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis
fig|6666666.67508.peg.2775 CDS gi|356609104|emb|CAFW01000009.1| 110958 110323 -3 - 636 CONSERVED 13E12 REPEAT FAMILY PROTEIN - none -
fig|6666666.67508.peg.2776 CDS gi|356609104|emb|CAFW01000009.1| 111135 111443 3 + 309 Mobile element protein - none -
fig|6666666.67508.peg.2777 CDS gi|356609200|emb|CAFW01000008.1| 2 670 2 + 669 [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of FASI (EC 2.3.1.39) / [Acyl-carrier-protein] palmitoyl transferase of FASI (EC 2.3.1.-) / Acyl carrier protein of FASI / 3-oxoacyl-[acyl-carrier-protein] reductase of FASI (EC 1.1.1.100) / 3-oxoacyl-[acyl-carrier-protein] synthase of FASI (EC 2.3.1.41) - none -
fig|6666666.67508.peg.2778 CDS gi|356609200|emb|CAFW01000008.1| 792 1010 3 + 219 hypothetical protein - none -
fig|6666666.67508.peg.2779 CDS gi|356609200|emb|CAFW01000008.1| 2202 1105 -3 - 1098 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.67508.peg.2780 CDS gi|356609200|emb|CAFW01000008.1| 2242 2733 1 + 492 FIG00546961: hypothetical protein - none -
fig|6666666.67508.peg.2781 CDS gi|356609200|emb|CAFW01000008.1| 2752 3564 1 + 813 Methylase of polypeptide chain release factors - none -
fig|6666666.67508.peg.2782 CDS gi|356609200|emb|CAFW01000008.1| 3634 4443 1 + 810 FIG00544979: hypothetical protein - none -
fig|6666666.67508.peg.2783 CDS gi|356609200|emb|CAFW01000008.1| 4559 5329 2 + 771 hypothetical protein - none -
fig|6666666.67508.peg.2784 CDS gi|356609200|emb|CAFW01000008.1| 5366 5665 2 + 300 hypothetical protein - none -
fig|6666666.67508.peg.2785 CDS gi|356609200|emb|CAFW01000008.1| 6253 5696 -1 - 558 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.67508.peg.2786 CDS gi|356609200|emb|CAFW01000008.1| 6612 6298 -3 - 315 FIG00544701: hypothetical protein - none -
fig|6666666.67508.peg.2787 CDS gi|356609200|emb|CAFW01000008.1| 7355 6774 -2 - 582 FIG00545378: hypothetical protein - none -
fig|6666666.67508.peg.2788 CDS gi|356609200|emb|CAFW01000008.1| 8863 7445 -1 - 1419 FIG00544632: hypothetical protein - none -
fig|6666666.67508.peg.2789 CDS gi|356609200|emb|CAFW01000008.1| 9359 8985 -2 - 375 Hypothetical succinate dehydrogenase membrane anhor protein Succinate dehydrogenase
fig|6666666.67508.peg.2790 CDS gi|356609200|emb|CAFW01000008.1| 10168 9419 -1 - 750 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67508.peg.2791 CDS gi|356609200|emb|CAFW01000008.1| 12183 10168 -3 - 2016 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.67508.peg.2792 CDS gi|356609200|emb|CAFW01000008.1| 12972 12217 -3 - 756 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.67508.peg.2793 CDS gi|356609200|emb|CAFW01000008.1| 13409 14803 2 + 1395 @2Transcriptional regulator, XRE family@2 - none -
fig|6666666.67508.peg.2794 CDS gi|356609200|emb|CAFW01000008.1| 16255 14897 -1 - 1359 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.67508.peg.2795 CDS gi|356609200|emb|CAFW01000008.1| 17147 18565 2 + 1419 FIG00546955: hypothetical protein - none -
fig|6666666.67508.peg.2796 CDS gi|356609200|emb|CAFW01000008.1| 18660 19736 3 + 1077 FIG00544202: hypothetical protein - none -
fig|6666666.67508.peg.2797 CDS gi|356609200|emb|CAFW01000008.1| 19802 21154 2 + 1353 aminopeptidase N - none -
fig|6666666.67508.peg.2798 CDS gi|356609200|emb|CAFW01000008.1| 21178 22227 1 + 1050 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67508.peg.2799 CDS gi|356609200|emb|CAFW01000008.1| 22250 23656 2 + 1407 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) / dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
Rhamnose containing glycans;
dTDP-rhamnose synthesis;
dTDP-rhamnose synthesis
fig|6666666.67508.peg.2800 CDS gi|356609200|emb|CAFW01000008.1| 23675 24541 2 + 867 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.67508.peg.2801 CDS gi|356609200|emb|CAFW01000008.1| 25197 24577 -3 - 621 Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol
fig|6666666.67508.peg.2802 CDS gi|356609200|emb|CAFW01000008.1| 26351 25254 -2 - 1098 Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66) / S-nitrosomycothiol reductase MscR Glutathione analogs: mycothiol;
Glutathione analogs: mycothiol
fig|6666666.67508.peg.2803 CDS gi|356609200|emb|CAFW01000008.1| 27278 26451 -2 - 828 Putative secreted hydrolase - none -
fig|6666666.67508.peg.2804 CDS gi|356609200|emb|CAFW01000008.1| 27467 29158 2 + 1692 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Fatty acid metabolism cluster
fig|6666666.67508.peg.2805 CDS gi|356609200|emb|CAFW01000008.1| 29343 30401 3 + 1059 ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component - none -
fig|6666666.67508.peg.2806 CDS gi|356609200|emb|CAFW01000008.1| 31111 30797 -1 - 315 hypothetical protein - none -
fig|6666666.67508.peg.2807 CDS gi|356609200|emb|CAFW01000008.1| 31469 31125 -2 - 345 hypothetical protein - none -
fig|6666666.67508.peg.2808 CDS gi|356609200|emb|CAFW01000008.1| 32311 31472 -1 - 840 Phage major capsid protein Phage capsid proteins
fig|6666666.67508.peg.2809 CDS gi|356609200|emb|CAFW01000008.1| 32639 32445 -2 - 195 hypothetical protein - none -
fig|6666666.67508.peg.2810 CDS gi|356609200|emb|CAFW01000008.1| 33175 32639 -1 - 537 hypothetical protein - none -
fig|6666666.67508.peg.2811 CDS gi|356609200|emb|CAFW01000008.1| 34248 33178 -3 - 1071 Phage portal protein # Pham3 Phage packaging machinery
fig|6666666.67508.peg.2812 CDS gi|356609200|emb|CAFW01000008.1| 35918 34464 -2 - 1455 Phage terminase, large subunit Phage packaging machinery
fig|6666666.67508.peg.2813 CDS gi|356609200|emb|CAFW01000008.1| 36645 36457 -3 - 189 hypothetical protein - none -
fig|6666666.67508.peg.2814 CDS gi|356609200|emb|CAFW01000008.1| 37525 36665 -1 - 861 hypothetical protein - none -
fig|6666666.67508.peg.2815 CDS gi|356609200|emb|CAFW01000008.1| 37935 37795 -3 - 141 hypothetical protein - none -
fig|6666666.67508.peg.2816 CDS gi|356609200|emb|CAFW01000008.1| 38295 37939 -3 - 357 hypothetical protein - none -
fig|6666666.67508.peg.2817 CDS gi|356609200|emb|CAFW01000008.1| 38682 39377 3 + 696 hypothetical protein - none -
fig|6666666.67508.peg.2818 CDS gi|356609200|emb|CAFW01000008.1| 39364 40593 1 + 1230 Integrase - none -
fig|6666666.67508.peg.2819 CDS gi|356609200|emb|CAFW01000008.1| 41983 40751 -1 - 1233 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.67508.peg.2820 CDS gi|356609200|emb|CAFW01000008.1| 42104 43624 2 + 1521 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.67508.peg.2821 CDS gi|356609200|emb|CAFW01000008.1| 43641 44930 3 + 1290 10 TMS hypothetical membrane protein - none -
fig|6666666.67508.peg.2822 CDS gi|356609200|emb|CAFW01000008.1| 44964 45587 3 + 624 10 TMS hypothetical membrane protein - none -
fig|6666666.67508.peg.2823 CDS gi|356609200|emb|CAFW01000008.1| 45627 45935 3 + 309 Mobile element protein - none -
fig|6666666.67508.peg.2824 CDS gi|356609245|emb|CAFW01000007.1| 4216 782 -1 - 3435 hypothetical protein - none -
fig|6666666.67508.peg.2825 CDS gi|356609245|emb|CAFW01000007.1| 5330 4806 -2 - 525 hypothetical protein - none -
fig|6666666.67508.peg.2826 CDS gi|356609245|emb|CAFW01000007.1| 5535 6425 3 + 891 Iron-chelator utilization protein - none -
fig|6666666.67508.peg.2827 CDS gi|356609245|emb|CAFW01000007.1| 6422 7012 2 + 591 hypothetical protein - none -
fig|6666666.67508.peg.2828 CDS gi|356609245|emb|CAFW01000007.1| 8054 7131 -2 - 924 hypothetical protein - none -
fig|6666666.67508.peg.2829 CDS gi|356609245|emb|CAFW01000007.1| 8005 8469 1 + 465 ABC transporter - none -
fig|6666666.67508.peg.2830 CDS gi|356609245|emb|CAFW01000007.1| 10044 9838 -3 - 207 hypothetical protein - none -
fig|6666666.67508.peg.2831 CDS gi|356609245|emb|CAFW01000007.1| 10110 10238 3 + 129 hypothetical protein - none -
fig|6666666.67508.peg.2832 CDS gi|356609256|emb|CAFW01000005.1| 34 417 1 + 384 Mobile element protein - none -
fig|6666666.67508.peg.2833 CDS gi|356609256|emb|CAFW01000005.1| 1124 432 -2 - 693 Transcriptional regulator, LacI family - none -
fig|6666666.67508.peg.2834 CDS gi|356609256|emb|CAFW01000005.1| 1943 1695 -2 - 249 Mobile element protein - none -
fig|6666666.67508.peg.2835 CDS gi|356609257|emb|CAFW01000004.1| 1068 778 -3 - 291 hypothetical protein - none -
fig|6666666.67508.peg.2836 CDS gi|356609257|emb|CAFW01000004.1| 1988 1437 -2 - 552 hypothetical protein - none -
fig|6666666.67508.peg.2837 CDS gi|356609257|emb|CAFW01000004.1| 2281 3102 1 + 822 hypothetical protein - none -
fig|6666666.67508.peg.2838 CDS gi|356609257|emb|CAFW01000004.1| 3349 4368 1 + 1020 Formamidase amiF (EC 3.5.1.49) - none -
fig|6666666.67508.peg.2839 CDS gi|356609257|emb|CAFW01000004.1| 4860 4744 -3 - 117 Mobile element protein - none -
fig|6666666.67508.peg.2840 CDS gi|356609261|emb|CAFW01000003.1| 3 404 3 + 402 Mobile element protein - none -
fig|6666666.67508.peg.2841 CDS gi|356609261|emb|CAFW01000003.1| 495 370 -3 - 126 hypothetical protein - none -
fig|6666666.67508.peg.2842 CDS gi|356609261|emb|CAFW01000003.1| 902 2101 2 + 1200 FIG045374: Type II restriction enzyme, methylase subunit YeeA - none -
fig|6666666.67508.peg.2843 CDS gi|356609261|emb|CAFW01000003.1| 2101 2334 1 + 234 Transposase for IS3513 - none -
fig|6666666.67508.peg.2844 CDS gi|356609263|emb|CAFW01000002.1| 1010 696 -2 - 315 putative transposase - none -
fig|6666666.67508.peg.2845 CDS gi|356609265|emb|CAFW01000001.1| 361 194 -1 - 168 hypothetical protein - none -
fig|6666666.67508.peg.2846 CDS gi|356609265|emb|CAFW01000001.1| 509 628 2 + 120 hypothetical protein - none -
fig|6666666.67508.peg.2847 CDS gi|356609265|emb|CAFW01000001.1| 1338 724 -3 - 615 Mobile element protein - none -
fig|6666666.67508.peg.2848 CDS gi|356609265|emb|CAFW01000001.1| 1691 1323 -2 - 369 Mobile element protein - none -
fig|6666666.67508.peg.2849 CDS gi|356609265|emb|CAFW01000001.1| 2185 1757 -1 - 429 hypothetical protein - none -
fig|6666666.67508.rna.1 RNA gi|356606462|emb|CAFW01000106.1| 3031 8 -1 - 3024 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67508.rna.2 RNA gi|356606463|emb|CAFW01000105.1| 21025 20941 -1 - 85 tRNA-Leu-CAG - none -
fig|6666666.67508.rna.3 RNA gi|356606547|emb|CAFW01000103.1| 660 572 -3 - 89 tRNA-Pseudo-GCT - none -
fig|6666666.67508.rna.4 RNA gi|356606547|emb|CAFW01000103.1| 5004 4920 -3 - 85 tRNA-Ser-TGA - none -
fig|6666666.67508.rna.5 RNA gi|356606634|emb|CAFW01000100.1| 66353 66280 -2 - 74 tRNA-Pro-GGG - none -
fig|6666666.67508.rna.6 RNA gi|356606634|emb|CAFW01000100.1| 138156 138241 3 + 86 tRNA-Leu-GAG - none -
fig|6666666.67508.rna.7 RNA gi|356606808|emb|CAFW01000099.1| 61 133 1 + 73 tRNA-Gly-GCC - none -
fig|6666666.67508.rna.8 RNA gi|356606987|emb|CAFW01000089.1| 72642 72715 3 + 74 tRNA-Arg-CCG - none -
fig|6666666.67508.rna.9 RNA gi|356607060|emb|CAFW01000088.1| 14949 14877 -3 - 73 tRNA-Glu-CTC - none -
fig|6666666.67508.rna.10 RNA gi|356607060|emb|CAFW01000088.1| 15062 14991 -2 - 72 tRNA-Gln-CTG - none -
fig|6666666.67508.rna.11 RNA gi|356607155|emb|CAFW01000086.1| 19851 19933 3 + 83 tRNA-Tyr-GTA - none -
fig|6666666.67508.rna.12 RNA gi|356607155|emb|CAFW01000086.1| 24440 24512 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.67508.rna.13 RNA gi|356607155|emb|CAFW01000086.1| 24562 24633 1 + 72 tRNA-Met-CAT - none -
fig|6666666.67508.rna.14 RNA gi|356607155|emb|CAFW01000086.1| 24732 24804 3 + 73 tRNA-Trp-CCA - none -
fig|6666666.67508.rna.15 RNA gi|356607248|emb|CAFW01000084.1| 5452 5380 -1 - 73 tRNA-Phe-GAA - none -
fig|6666666.67508.rna.16 RNA gi|356607248|emb|CAFW01000084.1| 5550 5477 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.67508.rna.17 RNA gi|356607248|emb|CAFW01000084.1| 8057 7984 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.67508.rna.18 RNA gi|356607248|emb|CAFW01000084.1| 8153 8081 -2 - 73 tRNA-Glu-TTC - none -
fig|6666666.67508.rna.19 RNA gi|356607248|emb|CAFW01000084.1| 14151 14079 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.67508.rna.20 RNA gi|356607297|emb|CAFW01000083.1| 20327 20400 2 + 74 tRNA-Leu-CAA - none -
fig|6666666.67508.rna.21 RNA gi|356607297|emb|CAFW01000083.1| 62725 62653 -1 - 73 tRNA-Glu-CTC - none -
fig|6666666.67508.rna.22 RNA gi|356607388|emb|CAFW01000081.1| 347 469 2 + 123 5S RNA - none -
fig|6666666.67508.rna.23 RNA gi|356607388|emb|CAFW01000081.1| 30335 30263 -2 - 73 tRNA-Arg-CCT - none -
fig|6666666.67508.rna.24 RNA gi|356607545|emb|CAFW01000079.1| 42628 42557 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.67508.rna.25 RNA gi|356607545|emb|CAFW01000079.1| 55461 55533 3 + 73 tRNA-Leu-TAA - none -
fig|6666666.67508.rna.26 RNA gi|356607545|emb|CAFW01000079.1| 160288 160378 1 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.67508.rna.27 RNA gi|356607702|emb|CAFW01000078.1| 74073 74145 3 + 73 tRNA-Thr-TGT - none -
fig|6666666.67508.rna.28 RNA gi|356607845|emb|CAFW01000076.1| 68141 68071 -2 - 71 tRNA-Gly-CCC - none -
fig|6666666.67508.rna.29 RNA gi|356607910|emb|CAFW01000075.1| 1 254 1 + 254 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67508.rna.30 RNA gi|356607910|emb|CAFW01000075.1| 418 540 1 + 123 5S RNA - none -
fig|6666666.67508.rna.31 RNA gi|356608051|emb|CAFW01000047.1| 28912 28840 -1 - 73 tRNA-Asn-GTT - none -
fig|6666666.67508.rna.32 RNA gi|356608137|emb|CAFW01000041.1| 72136 72209 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.67508.rna.33 RNA gi|356608137|emb|CAFW01000041.1| 72224 72296 2 + 73 tRNA-Ala-TGC - none -
fig|6666666.67508.rna.34 RNA gi|356608137|emb|CAFW01000041.1| 85863 85935 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.67508.rna.35 RNA gi|356608305|emb|CAFW01000037.1| 1522 38 -1 - 1485 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.67508.rna.36 RNA gi|356608306|emb|CAFW01000036.1| 28001 27919 -2 - 83 tRNA-Leu-TAG - none -
fig|6666666.67508.rna.37 RNA gi|356608306|emb|CAFW01000036.1| 63591 63519 -3 - 73 tRNA-Ala-GGC - none -
fig|6666666.67508.rna.38 RNA gi|356608306|emb|CAFW01000036.1| 72056 71934 -2 - 123 5S RNA - none -
fig|6666666.67508.rna.39 RNA gi|356608306|emb|CAFW01000036.1| 72725 72233 -2 - 493 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.67508.rna.40 RNA gi|356608406|emb|CAFW01000028.1| 12664 12737 1 + 74 tRNA-Met-CAT - none -
fig|6666666.67508.rna.41 RNA gi|356608406|emb|CAFW01000028.1| 31171 31243 1 + 73 tRNA-Val-TAC - none -
fig|6666666.67508.rna.42 RNA gi|356608448|emb|CAFW01000027.1| 47048 47121 2 + 74 tRNA-Met-CAT - none -
fig|6666666.67508.rna.43 RNA gi|356608533|emb|CAFW01000024.1| 479 407 -2 - 73 tRNA-Lys-CTT - none -
fig|6666666.67508.rna.44 RNA gi|356608533|emb|CAFW01000024.1| 8639 8567 -2 - 73 tRNA-His-GTG - none -
fig|6666666.67508.rna.45 RNA gi|356608533|emb|CAFW01000024.1| 26266 26193 -1 - 74 tRNA-Arg-TCT - none -
fig|6666666.67508.rna.46 RNA gi|356608533|emb|CAFW01000024.1| 45374 45445 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.67508.rna.47 RNA gi|356608533|emb|CAFW01000024.1| 47029 47102 1 + 74 tRNA-Pro-TGG - none -
fig|6666666.67508.rna.48 RNA gi|356608632|emb|CAFW01000016.1| 14987 14900 -2 - 88 tRNA-Ser-CGA - none -
fig|6666666.67508.rna.49 RNA gi|356608651|emb|CAFW01000015.1| 232420 232492 1 + 73 tRNA-Gly-GCC - none -
fig|6666666.67508.rna.50 RNA gi|356608651|emb|CAFW01000015.1| 232523 232594 2 + 72 tRNA-Val-GAC - none -
fig|6666666.67508.rna.51 RNA gi|356608868|emb|CAFW01000014.1| 5685 5757 3 + 73 tRNA-Arg-ACG - none -
fig|6666666.67508.rna.52 RNA gi|356608874|emb|CAFW01000013.1| 342 464 3 + 123 5S RNA - none -
fig|6666666.67508.rna.53 RNA gi|356608908|emb|CAFW01000012.1| 34866 34939 3 + 74 tRNA-Pro-CGG - none -
fig|6666666.67508.rna.54 RNA gi|356608908|emb|CAFW01000012.1| 65593 65508 -1 - 86 tRNA-Ser-GGA - none -
fig|6666666.67508.rna.55 RNA gi|356609200|emb|CAFW01000008.1| 40665 40593 -3 - 73 tRNA-Thr-CGT - none -
fig|6666666.67508.rna.56 RNA gi|356609256|emb|CAFW01000005.1| 1482 1555 3 + 74 tRNA-Met-CAT - none -