Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.71390.peg.3831
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.71390.peg.855, <br>fig|6666666.71390.peg.2347
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.71390.peg.3869
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.71390.peg.856
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.71390.peg.857
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.71390.peg.861
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.71390.peg.251, <br>fig|6666666.71390.peg.252, <br>fig|6666666.71390.peg.500, <br>fig|6666666.71390.peg.575, <br>fig|6666666.71390.peg.576, <br>fig|6666666.71390.peg.814, <br>fig|6666666.71390.peg.1094, <br>fig|6666666.71390.peg.1146, <br>fig|6666666.71390.peg.1462, <br>fig|6666666.71390.peg.1603, <br>fig|6666666.71390.peg.1664, <br>fig|6666666.71390.peg.1670, <br>fig|6666666.71390.peg.1891, <br>fig|6666666.71390.peg.2008, <br>fig|6666666.71390.peg.2018, <br>fig|6666666.71390.peg.2131, <br>fig|6666666.71390.peg.2133, <br>fig|6666666.71390.peg.2244, <br>fig|6666666.71390.peg.2368, <br>fig|6666666.71390.peg.2555, <br>fig|6666666.71390.peg.2659, <br>fig|6666666.71390.peg.2868, <br>fig|6666666.71390.peg.2944, <br>fig|6666666.71390.peg.2953, <br>fig|6666666.71390.peg.3189, <br>fig|6666666.71390.peg.3199, <br>fig|6666666.71390.peg.3297, <br>fig|6666666.71390.peg.3442, <br>fig|6666666.71390.peg.3451, <br>fig|6666666.71390.peg.3464, <br>fig|6666666.71390.peg.3543, <br>fig|6666666.71390.peg.3872, <br>fig|6666666.71390.peg.4321, <br>fig|6666666.71390.peg.4537, <br>fig|6666666.71390.peg.4624, <br>fig|6666666.71390.peg.4635, <br>fig|6666666.71390.peg.4712, <br>fig|6666666.71390.peg.5097, <br>fig|6666666.71390.peg.5101, <br>fig|6666666.71390.peg.5197, <br>fig|6666666.71390.peg.5333, <br>fig|6666666.71390.peg.5334, <br>fig|6666666.71390.peg.5833, <br>fig|6666666.71390.peg.5837, <br>fig|6666666.71390.peg.6385, <br>fig|6666666.71390.peg.6424, <br>fig|6666666.71390.peg.6528, <br>fig|6666666.71390.peg.6609, <br>fig|6666666.71390.peg.6690, <br>fig|6666666.71390.peg.6691, <br>fig|6666666.71390.peg.6785, <br>fig|6666666.71390.peg.6837, <br>fig|6666666.71390.peg.6937, <br>fig|6666666.71390.peg.6967, <br>fig|6666666.71390.peg.6972, <br>fig|6666666.71390.peg.7082, <br>fig|6666666.71390.peg.7510, <br>fig|6666666.71390.peg.7550, <br>fig|6666666.71390.peg.7552, <br>fig|6666666.71390.peg.7681
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin synthesis cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.2549, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3185, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	Predicted biotin repressor from TetR family	fig|6666666.71390.peg.860, <br>fig|6666666.71390.peg.5991
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.71390.peg.855, <br>fig|6666666.71390.peg.2347
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.71390.peg.3869
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.71390.peg.856
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.71390.peg.857
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.71390.peg.861
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.71390.peg.251, <br>fig|6666666.71390.peg.252, <br>fig|6666666.71390.peg.500, <br>fig|6666666.71390.peg.575, <br>fig|6666666.71390.peg.576, <br>fig|6666666.71390.peg.814, <br>fig|6666666.71390.peg.1094, <br>fig|6666666.71390.peg.1146, <br>fig|6666666.71390.peg.1462, <br>fig|6666666.71390.peg.1603, <br>fig|6666666.71390.peg.1664, <br>fig|6666666.71390.peg.1670, <br>fig|6666666.71390.peg.1891, <br>fig|6666666.71390.peg.2008, <br>fig|6666666.71390.peg.2018, <br>fig|6666666.71390.peg.2131, <br>fig|6666666.71390.peg.2133, <br>fig|6666666.71390.peg.2244, <br>fig|6666666.71390.peg.2368, <br>fig|6666666.71390.peg.2555, <br>fig|6666666.71390.peg.2659, <br>fig|6666666.71390.peg.2868, <br>fig|6666666.71390.peg.2944, <br>fig|6666666.71390.peg.2953, <br>fig|6666666.71390.peg.3189, <br>fig|6666666.71390.peg.3199, <br>fig|6666666.71390.peg.3297, <br>fig|6666666.71390.peg.3442, <br>fig|6666666.71390.peg.3451, <br>fig|6666666.71390.peg.3464, <br>fig|6666666.71390.peg.3543, <br>fig|6666666.71390.peg.3872, <br>fig|6666666.71390.peg.4321, <br>fig|6666666.71390.peg.4537, <br>fig|6666666.71390.peg.4624, <br>fig|6666666.71390.peg.4635, <br>fig|6666666.71390.peg.4712, <br>fig|6666666.71390.peg.5097, <br>fig|6666666.71390.peg.5101, <br>fig|6666666.71390.peg.5197, <br>fig|6666666.71390.peg.5333, <br>fig|6666666.71390.peg.5334, <br>fig|6666666.71390.peg.5833, <br>fig|6666666.71390.peg.5837, <br>fig|6666666.71390.peg.6385, <br>fig|6666666.71390.peg.6424, <br>fig|6666666.71390.peg.6528, <br>fig|6666666.71390.peg.6609, <br>fig|6666666.71390.peg.6690, <br>fig|6666666.71390.peg.6691, <br>fig|6666666.71390.peg.6785, <br>fig|6666666.71390.peg.6837, <br>fig|6666666.71390.peg.6937, <br>fig|6666666.71390.peg.6967, <br>fig|6666666.71390.peg.6972, <br>fig|6666666.71390.peg.7082, <br>fig|6666666.71390.peg.7510, <br>fig|6666666.71390.peg.7550, <br>fig|6666666.71390.peg.7552, <br>fig|6666666.71390.peg.7681
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.2549, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3185, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.71390.peg.857
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.71390.peg.861
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.71390.peg.3831
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.71390.peg.855, <br>fig|6666666.71390.peg.2347
Cofactors, Vitamins, Prosthetic Groups, Pigments	Biotin	Biotin biosynthesis Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.71390.peg.856
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.71390.peg.3749
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Hydroxymethylpyrimidine ABC transporter, substrate-binding component	fig|6666666.71390.peg.2357, <br>fig|6666666.71390.peg.2530
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Glycine oxidase ThiO (EC 1.4.3.19)	fig|6666666.71390.peg.4995
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.71390.peg.4993
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.71390.peg.7729
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.71390.peg.2293
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.71390.peg.2735
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.71390.peg.4893, <br>fig|6666666.71390.peg.6934
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Hydroxymethylpyrimidine ABC transporter, ATPase component	fig|6666666.71390.peg.2529, <br>fig|6666666.71390.peg.6548
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.71390.peg.7731
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Thiaminase II (EC 3.5.99.2)	fig|6666666.71390.peg.1880
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Hydroxymethylpyrimidine ABC transporter, transmembrane component	fig|6666666.71390.peg.2531
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.71390.peg.4996
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.71390.peg.5721
Cofactors, Vitamins, Prosthetic Groups, Pigments	Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory	Thiamin biosynthesis	Sulfur carrier protein ThiS	fig|6666666.71390.peg.4994
Cofactors, Vitamins, Prosthetic Groups, Pigments	Quinone cofactors	Menaquinone and Phylloquinone Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.71390.peg.4642
Cofactors, Vitamins, Prosthetic Groups, Pigments	Quinone cofactors	Menaquinone and Phylloquinone Biosynthesis	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.71390.peg.4614
Cofactors, Vitamins, Prosthetic Groups, Pigments	Quinone cofactors	Menaquinone and Phylloquinone Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.71390.peg.4613
Cofactors, Vitamins, Prosthetic Groups, Pigments	Quinone cofactors	Menaquinone and Phylloquinone Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.71390.peg.4657
Cofactors, Vitamins, Prosthetic Groups, Pigments	Quinone cofactors	Menaquinone and Phylloquinone Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.71390.peg.1878, <br>fig|6666666.71390.peg.4622
Cofactors, Vitamins, Prosthetic Groups, Pigments	Quinone cofactors	Menaquinone and Phylloquinone Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.71390.peg.4607
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.71390.peg.1300
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cobalamin biosynthesis protein BluB	fig|6666666.71390.peg.6332
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.71390.peg.1084
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.71390.peg.1124
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.71390.peg.1303
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.71390.peg.1302
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.71390.peg.1299
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.71390.peg.1302
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.71390.peg.1123
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.71390.peg.2511
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Cobalamin synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.71390.peg.2512
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.71390.peg.234
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.71390.peg.2279
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.71390.peg.4744
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.71390.peg.2218, <br>fig|6666666.71390.peg.4691, <br>fig|6666666.71390.peg.4763
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Precorrin-2 oxidase (EC 1.3.1.76)	fig|6666666.71390.peg.2513
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.71390.peg.4743
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	fig|6666666.71390.peg.2742
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.71390.peg.4746
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.71390.peg.4745
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.71390.peg.2513, <br>fig|6666666.71390.peg.4744
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.71390.peg.800
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.71390.peg.2740
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.71390.peg.2741
Cofactors, Vitamins, Prosthetic Groups, Pigments	Tetrapyrroles	Heme and Siroheme Biosynthesis	Sirohydrochlorin ferrochelatase (EC 4.99.1.4)	fig|6666666.71390.peg.231, <br>fig|6666666.71390.peg.2513, <br>fig|6666666.71390.peg.6806
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.71390.peg.2559
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	FIG000859: hypothetical protein YebC	fig|6666666.71390.peg.565
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	Molybdopterin binding motif, CinA N-terminal domain	fig|6666666.71390.peg.1847
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	C-terminal domain of CinA type S	fig|6666666.71390.peg.1847, <br>fig|6666666.71390.peg.2609
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.71390.peg.722, <br>fig|6666666.71390.peg.5651, <br>fig|6666666.71390.peg.7538
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.71390.peg.715
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.71390.peg.2547
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.71390.peg.2559
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.71390.peg.721
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.71390.peg.720
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.71390.peg.715
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism in plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.71390.peg.721
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	riboflavin to FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.71390.peg.2559
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	riboflavin to FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.71390.peg.720
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	riboflavin to FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.71390.peg.2559
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	riboflavin to FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.71390.peg.721
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.71390.peg.2559
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.71390.peg.720
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.71390.peg.715
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.71390.peg.722, <br>fig|6666666.71390.peg.5651, <br>fig|6666666.71390.peg.7538
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.71390.peg.715
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.71390.peg.2559
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.71390.peg.721
Cofactors, Vitamins, Prosthetic Groups, Pigments	Riboflavin, FMN, FAD	Riboflavin, FMN and FAD metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.71390.peg.721
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	fig|6666666.71390.peg.560, <br>fig|6666666.71390.peg.6748
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.71390.peg.2273, <br>fig|6666666.71390.peg.3236, <br>fig|6666666.71390.peg.4264, <br>fig|6666666.71390.peg.6255, <br>fig|6666666.71390.peg.6264, <br>fig|6666666.71390.peg.7016, <br>fig|6666666.71390.peg.7087
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.71390.peg.6067, <br>fig|6666666.71390.peg.6068
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5)	fig|6666666.71390.peg.4644, <br>fig|6666666.71390.peg.7471
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.71390.peg.7464
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.71390.peg.2735
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	fig|6666666.71390.peg.562
Cofactors, Vitamins, Prosthetic Groups, Pigments	Pyridoxine	Pyridoxin (Vitamin B6) Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.71390.peg.739, <br>fig|6666666.71390.peg.740, <br>fig|6666666.71390.peg.4943
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.71390.peg.868
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Nudix-related transcriptional regulator NrtR	fig|6666666.71390.peg.867
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.71390.peg.1991
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Nicotinamidase/isochorismatase family protein	fig|6666666.71390.peg.6024
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.71390.peg.870
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	NAD kinase (EC 2.7.1.23)	fig|6666666.71390.peg.1444
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	C-terminal domain of CinA type S	fig|6666666.71390.peg.1847, <br>fig|6666666.71390.peg.2609, <br>fig|6666666.71390.peg.1847, <br>fig|6666666.71390.peg.2609
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.71390.peg.1450, <br>fig|6666666.71390.peg.2954
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)	fig|6666666.71390.peg.7360
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	NAD synthetase (EC 6.3.1.5)	fig|6666666.71390.peg.141
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.71390.peg.141
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.71390.peg.869
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.71390.peg.147
Cofactors, Vitamins, Prosthetic Groups, Pigments	NAD and NADP	NAD and NADP cofactor biosynthesis global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.71390.peg.140, <br>fig|6666666.71390.peg.5735
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.71390.peg.6284
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.71390.peg.6270
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	FIG027937: secreted protein	fig|6666666.71390.peg.6287
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.71390.peg.6291
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.71390.peg.1069, <br>fig|6666666.71390.peg.4484, <br>fig|6666666.71390.peg.4857, <br>fig|6666666.71390.peg.6282
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.71390.peg.6283
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	transmembrane protein, distant homology with ydbS	fig|6666666.71390.peg.4849
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.71390.peg.6290
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.71390.peg.6286
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate biosynthesis cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.71390.peg.6285
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.71390.peg.1737
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.71390.peg.7445
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.71390.peg.1736
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.71390.peg.7447
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.71390.peg.3333, <br>fig|6666666.71390.peg.4854
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.71390.peg.721
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.71390.peg.120
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.71390.peg.7449
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.71390.peg.6283
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.71390.peg.3265, <br>fig|6666666.71390.peg.7450
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.71390.peg.4338
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdenum cofactor biosynthesis protein MoaB	fig|6666666.71390.peg.3351, <br>fig|6666666.71390.peg.7446
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Molybdenum cofactor biosynthesis	Molybdate-binding domain of ModE	fig|6666666.71390.peg.4339
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.71390.peg.7309
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.71390.peg.129, <br>fig|6666666.71390.peg.3529
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.71390.peg.6284
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.71390.peg.3335
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.71390.peg.619, <br>fig|6666666.71390.peg.2581, <br>fig|6666666.71390.peg.5062, <br>fig|6666666.71390.peg.5547
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.71390.peg.2596
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.71390.peg.129, <br>fig|6666666.71390.peg.3529
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.71390.peg.6283
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.71390.peg.3308
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.71390.peg.2580
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.71390.peg.6286
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.71390.peg.6285
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Folate Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.71390.peg.5360
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.71390.peg.279, <br>fig|6666666.71390.peg.1742, <br>fig|6666666.71390.peg.1756, <br>fig|6666666.71390.peg.1928, <br>fig|6666666.71390.peg.2196, <br>fig|6666666.71390.peg.2428, <br>fig|6666666.71390.peg.3181, <br>fig|6666666.71390.peg.3245, <br>fig|6666666.71390.peg.3374, <br>fig|6666666.71390.peg.3595, <br>fig|6666666.71390.peg.3628, <br>fig|6666666.71390.peg.3648, <br>fig|6666666.71390.peg.3667, <br>fig|6666666.71390.peg.3668, <br>fig|6666666.71390.peg.4711, <br>fig|6666666.71390.peg.5053, <br>fig|6666666.71390.peg.6104, <br>fig|6666666.71390.peg.6107, <br>fig|6666666.71390.peg.6384, <br>fig|6666666.71390.peg.6419, <br>fig|6666666.71390.peg.6513, <br>fig|6666666.71390.peg.6655, <br>fig|6666666.71390.peg.6891, <br>fig|6666666.71390.peg.6919, <br>fig|6666666.71390.peg.6983
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.71390.peg.619, <br>fig|6666666.71390.peg.2581, <br>fig|6666666.71390.peg.5062, <br>fig|6666666.71390.peg.5547
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.71390.peg.3139, <br>fig|6666666.71390.peg.3140, <br>fig|6666666.71390.peg.3519, <br>fig|6666666.71390.peg.7203
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.71390.peg.2245, <br>fig|6666666.71390.peg.7701
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	fig|6666666.71390.peg.4893, <br>fig|6666666.71390.peg.6934
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.71390.peg.4010, <br>fig|6666666.71390.peg.6789, <br>fig|6666666.71390.peg.7547
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.71390.peg.1416, <br>fig|6666666.71390.peg.3782, <br>fig|6666666.71390.peg.6892
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Thiaminase II (EC 3.5.99.2)	fig|6666666.71390.peg.1880
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.3977, <br>fig|6666666.71390.peg.4818, <br>fig|6666666.71390.peg.5523, <br>fig|6666666.71390.peg.7566
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.71390.peg.3478, <br>fig|6666666.71390.peg.3516
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.71390.peg.4038, <br>fig|6666666.71390.peg.4039
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.71390.peg.3335
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.71390.peg.446, <br>fig|6666666.71390.peg.6977
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.71390.peg.2293
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.71390.peg.4049
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.71390.peg.7702
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.71390.peg.4913, <br>fig|6666666.71390.peg.6947, <br>fig|6666666.71390.peg.7569
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	5-FCL-like protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.71390.peg.4996
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Pterin carbinolamine dehydratase	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)	fig|6666666.71390.peg.3600, <br>fig|6666666.71390.peg.6981
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Pterin carbinolamine dehydratase	Fumarylacetoacetase (EC 3.7.1.2)	fig|6666666.71390.peg.934, <br>fig|6666666.71390.peg.6982, <br>fig|6666666.71390.peg.7090
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Pterin carbinolamine dehydratase	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	fig|6666666.71390.peg.91, <br>fig|6666666.71390.peg.3772, <br>fig|6666666.71390.peg.6980
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Pterin carbinolamine dehydratase	Aromatic-amino-acid aminotransferase (EC 2.6.1.57)	fig|6666666.71390.peg.4249
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Pterin carbinolamine dehydratase	Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)	fig|6666666.71390.peg.2515
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Pterin carbinolamine dehydratase	Phenylalanine-4-hydroxylase (EC 1.14.16.1)	fig|6666666.71390.peg.1927
Cofactors, Vitamins, Prosthetic Groups, Pigments	Folate and pterines	Pterin carbinolamine dehydratase	Fumarylacetoacetate hydrolase family protein	fig|6666666.71390.peg.1214, <br>fig|6666666.71390.peg.5665, <br>fig|6666666.71390.peg.6875, <br>fig|6666666.71390.peg.6943
Cofactors, Vitamins, Prosthetic Groups, Pigments	Lipoic acid	Lipoic acid metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.71390.peg.1113
Cofactors, Vitamins, Prosthetic Groups, Pigments	Lipoic acid	Lipoic acid metabolism	Lipoate synthase	fig|6666666.71390.peg.1112, <br>fig|6666666.71390.peg.7205
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme F420	Coenzyme F420 synthesis	Coenzyme F420-1:L-glutamate ligase	fig|6666666.71390.peg.3855
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme F420	Coenzyme F420 synthesis	Coenzyme F420-0:L-glutamate ligase	fig|6666666.71390.peg.3855
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme F420	Coenzyme F420 synthesis	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2	fig|6666666.71390.peg.2996
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme F420	Coenzyme F420 synthesis	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1	fig|6666666.71390.peg.2996
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme F420	Coenzyme F420 synthesis	Lactyl (2) diphospho-(5@1)guanosine:7,8-didemethyl-8-hydroxy-5-deazariboflavin 2-phospho-L-lactate transferase	fig|6666666.71390.peg.3854
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.71390.peg.1098
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.71390.peg.6290
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.71390.peg.6292
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.71390.peg.6291
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.71390.peg.1098
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.71390.peg.3142, <br>fig|6666666.71390.peg.5520
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.71390.peg.1342
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.71390.peg.6292
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.71390.peg.6291
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.71390.peg.634, <br>fig|6666666.71390.peg.5857, <br>fig|6666666.71390.peg.6951
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.71390.peg.2269
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.71390.peg.2309
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.71390.peg.698
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.71390.peg.698
Cofactors, Vitamins, Prosthetic Groups, Pigments	Coenzyme A	Coenzyme A Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.71390.peg.6290
Cell Wall and Capsule	Capsular and extracellular polysacchrides	dTDP-rhamnose synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.71390.peg.3859
Cell Wall and Capsule	Capsular and extracellular polysacchrides	dTDP-rhamnose synthesis	Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)	fig|6666666.71390.peg.4780
Cell Wall and Capsule	Capsular and extracellular polysacchrides	dTDP-rhamnose synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.71390.peg.3919, <br>fig|6666666.71390.peg.4226, <br>fig|6666666.71390.peg.4760
Cell Wall and Capsule	Capsular and extracellular polysacchrides	dTDP-rhamnose synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.71390.peg.4227, <br>fig|6666666.71390.peg.4761, <br>fig|6666666.71390.peg.4777
Cell Wall and Capsule	Capsular and extracellular polysacchrides	dTDP-rhamnose synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.71390.peg.4762, <br>fig|6666666.71390.peg.5348
Cell Wall and Capsule	Capsular and extracellular polysacchrides	dTDP-rhamnose synthesis	dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	fig|6666666.71390.peg.3858
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Capsular heptose biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.71390.peg.3915
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Capsular heptose biosynthesis	D-glycero-D-manno-heptose 1-phosphate guanosyltransferase	fig|6666666.71390.peg.3857
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Capsular heptose biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.71390.peg.4966
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Capsular heptose biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.71390.peg.4227, <br>fig|6666666.71390.peg.4761, <br>fig|6666666.71390.peg.4777
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Rhamnose containing glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.71390.peg.660, <br>fig|6666666.71390.peg.4672, <br>fig|6666666.71390.peg.4751, <br>fig|6666666.71390.peg.4778, <br>fig|6666666.71390.peg.6225
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Rhamnose containing glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.71390.peg.3859
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Rhamnose containing glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.71390.peg.3919, <br>fig|6666666.71390.peg.4226, <br>fig|6666666.71390.peg.4760
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Rhamnose containing glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.71390.peg.4227, <br>fig|6666666.71390.peg.4761, <br>fig|6666666.71390.peg.4777
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Rhamnose containing glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.71390.peg.4762, <br>fig|6666666.71390.peg.5348
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Lipid-linked oligosaccharide synthesis related cluster	Cytoplasmic membrane protein FsxA	fig|6666666.71390.peg.1314
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Lipid-linked oligosaccharide synthesis related cluster	Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.71390.peg.1317, <br>fig|6666666.71390.peg.1806, <br>fig|6666666.71390.peg.6229
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Lipid-linked oligosaccharide synthesis related cluster	Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster	fig|6666666.71390.peg.1315, <br>fig|6666666.71390.peg.6820
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Lipid-linked oligosaccharide synthesis related cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-) in lipid-linked oligosaccharide synthesis cluster	fig|6666666.71390.peg.1316, <br>fig|6666666.71390.peg.1492
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Lipid-linked oligosaccharide synthesis related cluster	FIG00820327: hypothetical protein	fig|6666666.71390.peg.1318
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.71390.peg.3555
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.71390.peg.3287
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	Sialic acid transporter (permease) NanT	fig|6666666.71390.peg.3195
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.71390.peg.2216
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.71390.peg.4172
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.71390.peg.3556
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.71390.peg.3198
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.71390.peg.4179
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.71390.peg.3556
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.71390.peg.3287
Cell Wall and Capsule	Capsular and extracellular polysacchrides	Sialic Acid Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.71390.peg.4029
Cell Wall and Capsule	Gram-Negative cell wall components	Peptidoglycan lipid II flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.71390.peg.5453
Cell Wall and Capsule	Gram-Negative cell wall components	LOS core oligosaccharide biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.71390.peg.3915
Cell Wall and Capsule	Gram-Negative cell wall components	LOS core oligosaccharide biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.71390.peg.4966
Cell Wall and Capsule	Gram-Negative cell wall components	LOS core oligosaccharide biosynthesis	ADP-heptose synthase (EC 2.7.-.-)	fig|6666666.71390.peg.3914
Cell Wall and Capsule	Gram-Negative cell wall components	LOS core oligosaccharide biosynthesis	UDP-galactopyranose mutase (EC 5.4.99.9)	fig|6666666.71390.peg.5821
Cell Wall and Capsule	Gram-Negative cell wall components	LOS core oligosaccharide biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.71390.peg.3912
Cell Wall and Capsule	Gram-Negative cell wall components	LOS core oligosaccharide biosynthesis	D-glycero-beta-D-manno-heptose 7-phosphate kinase	fig|6666666.71390.peg.3914
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Murein Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.71390.peg.5448
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Murein Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.71390.peg.318, <br>fig|6666666.71390.peg.2326, <br>fig|6666666.71390.peg.2327, <br>fig|6666666.71390.peg.4019, <br>fig|6666666.71390.peg.6267
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Murein Hydrolases	Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)	fig|6666666.71390.peg.1963
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.71390.peg.3287
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.71390.peg.1167
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.71390.peg.318, <br>fig|6666666.71390.peg.2326, <br>fig|6666666.71390.peg.2327, <br>fig|6666666.71390.peg.4019, <br>fig|6666666.71390.peg.6267
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.71390.peg.1166, <br>fig|6666666.71390.peg.2485, <br>fig|6666666.71390.peg.5357, <br>fig|6666666.71390.peg.6000
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.71390.peg.4796
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.71390.peg.356, <br>fig|6666666.71390.peg.416, <br>fig|6666666.71390.peg.1103, <br>fig|6666666.71390.peg.1109, <br>fig|6666666.71390.peg.1808, <br>fig|6666666.71390.peg.5593, <br>fig|6666666.71390.peg.6082
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.71390.peg.90
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.71390.peg.483
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.71390.peg.1170
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.71390.peg.1172
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.71390.peg.1168
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.71390.peg.1999, <br>fig|6666666.71390.peg.3215
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.71390.peg.1173
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.71390.peg.2290
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.71390.peg.1075, <br>fig|6666666.71390.peg.1169
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.71390.peg.3287
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.71390.peg.336, <br>fig|6666666.71390.peg.5479, <br>fig|6666666.71390.peg.5480, <br>fig|6666666.71390.peg.6153
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.71390.peg.4796
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.71390.peg.3287
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.71390.peg.4172
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.71390.peg.483
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.71390.peg.4179
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.71390.peg.3287
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	YjeE	CBS domain protein sometimes clustered with YjeE	fig|6666666.71390.peg.4866
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	YjeE	NAD(P)HX epimerase	fig|6666666.71390.peg.4168
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	YjeE	NAD(P)HX dehydratase	fig|6666666.71390.peg.4168
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Recycling of Peptidoglycan Amino Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.71390.peg.5448
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Recycling of Peptidoglycan Amino Acids	Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)	fig|6666666.71390.peg.1963
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.71390.peg.1173
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.71390.peg.1170
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.71390.peg.1167
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.71390.peg.2290
Cell Wall and Capsule	Cell Wall and Capsule - no subcategory	Peptidoglycan biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.71390.peg.1168
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Copper homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.71390.peg.2853, <br>fig|6666666.71390.peg.3260, <br>fig|6666666.71390.peg.6621
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Copper homeostasis	Copper chaperone	fig|6666666.71390.peg.2855
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Copper homeostasis	Copper resistance protein D	fig|6666666.71390.peg.42, <br>fig|6666666.71390.peg.5785
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Cobalt-zinc-cadmium resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.71390.peg.7255
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Cobalt-zinc-cadmium resistance	Transcriptional regulator, MerR family	fig|6666666.71390.peg.412, <br>fig|6666666.71390.peg.838, <br>fig|6666666.71390.peg.1011, <br>fig|6666666.71390.peg.1712, <br>fig|6666666.71390.peg.3733, <br>fig|6666666.71390.peg.4532, <br>fig|6666666.71390.peg.5563, <br>fig|6666666.71390.peg.5939, <br>fig|6666666.71390.peg.6081, <br>fig|6666666.71390.peg.6498, <br>fig|6666666.71390.peg.6850
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Mercuric reductase	PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase	fig|6666666.71390.peg.1245, <br>fig|6666666.71390.peg.3665, <br>fig|6666666.71390.peg.5536
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Mercuric reductase	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.71390.peg.3665
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Mercury resistance operon	Mercuric ion reductase (EC 1.16.1.1)	fig|6666666.71390.peg.3665
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Mercury resistance operon	Mercuric resistance operon regulatory protein	fig|6666666.71390.peg.6626
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Arsenic resistance	Arsenical-resistance protein ACR3	fig|6666666.71390.peg.3682
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Arsenic resistance	Arsenical resistance operon repressor	fig|6666666.71390.peg.3278, <br>fig|6666666.71390.peg.6631, <br>fig|6666666.71390.peg.6634
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Arsenic resistance	Arsenical pump-driving ATPase (EC 3.6.3.16)	fig|6666666.71390.peg.1149, <br>fig|6666666.71390.peg.6160, <br>fig|6666666.71390.peg.6161
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Arsenic resistance	Arsenic efflux pump protein	fig|6666666.71390.peg.6318
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Arsenic resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.71390.peg.3279, <br>fig|6666666.71390.peg.3280, <br>fig|6666666.71390.peg.3289, <br>fig|6666666.71390.peg.6628, <br>fig|6666666.71390.peg.6629, <br>fig|6666666.71390.peg.6630
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Resistance to fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.71390.peg.4518, <br>fig|6666666.71390.peg.5431
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Resistance to fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.71390.peg.5373
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Resistance to fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.71390.peg.6879
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Resistance to fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.71390.peg.6878
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.71390.peg.428, <br>fig|6666666.71390.peg.684, <br>fig|6666666.71390.peg.5551, <br>fig|6666666.71390.peg.6241, <br>fig|6666666.71390.peg.6769, <br>fig|6666666.71390.peg.7607
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Beta-lactamase	Beta-lactamase (EC 3.5.2.6)	fig|6666666.71390.peg.2565, <br>fig|6666666.71390.peg.6046, <br>fig|6666666.71390.peg.6299, <br>fig|6666666.71390.peg.7528
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily III	fig|6666666.71390.peg.2000
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Beta-lactamase	Beta-lactamase	fig|6666666.71390.peg.5681
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Resistance to chromium compounds	Superoxide dismutase SodM-like protein ChrF	fig|6666666.71390.peg.6944
Virulence, Disease and Defense	Resistance to antibiotics and toxic compounds	Resistance to chromium compounds	Chromate transport protein ChrA	fig|6666666.71390.peg.7497
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.71390.peg.5439
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD	RNA-binding protein Jag	fig|6666666.71390.peg.5440
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD	Protein YidD	fig|6666666.71390.peg.5438
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon possibly involved in quinolinate biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.71390.peg.868
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon possibly involved in quinolinate biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.71390.peg.870
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon possibly involved in quinolinate biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.71390.peg.869
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in DNA transcription	DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6)	fig|6666666.71390.peg.4389
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in DNA transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.71390.peg.4390
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.71390.peg.4370
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)	Translation elongation factor G	fig|6666666.71390.peg.4369
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)	Translation elongation factor Tu	fig|6666666.71390.peg.4368
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.71390.peg.4371
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)	FIG025093: Probable membrane protein	fig|6666666.71390.peg.4364, <br>fig|6666666.71390.peg.4822
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in fatty acids biosynthesis	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.71390.peg.441, <br>fig|6666666.71390.peg.442, <br>fig|6666666.71390.peg.4509, <br>fig|6666666.71390.peg.4555
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in fatty acids biosynthesis	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.71390.peg.440, <br>fig|6666666.71390.peg.3432, <br>fig|6666666.71390.peg.5835
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in lipid metabolism	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.71390.peg.7330
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in lipid metabolism	Fatty acid desaturase occurring in virulence cluster	fig|6666666.71390.peg.1260, <br>fig|6666666.71390.peg.3138, <br>fig|6666666.71390.peg.3377, <br>fig|6666666.71390.peg.7331
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins)	LSU ribosomal protein L35p	fig|6666666.71390.peg.1380
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins)	Translation initiation factor 3	fig|6666666.71390.peg.1379
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins)	LSU ribosomal protein L20p	fig|6666666.71390.peg.1381
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	FIG030769: Probable conserved MCE associated membrane protein	fig|6666666.71390.peg.6438
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	MCE-family protein Mce1F	fig|6666666.71390.peg.2116, <br>fig|6666666.71390.peg.5085, <br>fig|6666666.71390.peg.6432
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	MCE-family protein Mce1D	fig|6666666.71390.peg.2114, <br>fig|6666666.71390.peg.5087, <br>fig|6666666.71390.peg.6430
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	Conserved hypothetical integral membrane protein YrbE1A	fig|6666666.71390.peg.2109, <br>fig|6666666.71390.peg.5092, <br>fig|6666666.71390.peg.6425
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	MCE-family protein Mce1A	fig|6666666.71390.peg.2111, <br>fig|6666666.71390.peg.5090, <br>fig|6666666.71390.peg.5330, <br>fig|6666666.71390.peg.5714, <br>fig|6666666.71390.peg.5715, <br>fig|6666666.71390.peg.6427, <br>fig|6666666.71390.peg.6935, <br>fig|6666666.71390.peg.7300
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	FIG033430: Probable conserved MCE associated membrane protein	fig|6666666.71390.peg.6435
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	Conserved hypothetical integral membrane protein YrbE1B	fig|6666666.71390.peg.2110, <br>fig|6666666.71390.peg.5091, <br>fig|6666666.71390.peg.6426
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	MCE-family lipoprotein LprK (MCE-family lipoprotein Mce1e)	fig|6666666.71390.peg.2115, <br>fig|6666666.71390.peg.5086, <br>fig|6666666.71390.peg.6431
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	FIG033285: Conserved MCE associated transmembrane protein	fig|6666666.71390.peg.6436
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	MCE-family protein Mce1B	fig|6666666.71390.peg.2112, <br>fig|6666666.71390.peg.5089, <br>fig|6666666.71390.peg.6428
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	FIG034772: Probable conserved MCE associated protein	fig|6666666.71390.peg.6437
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon MCE involved in cell invasion	MCE-family protein Mce1C	fig|6666666.71390.peg.2113, <br>fig|6666666.71390.peg.5088, <br>fig|6666666.71390.peg.6429
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in an unknown function with Superoxide dismutase	Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)	fig|6666666.71390.peg.5795
Virulence, Disease and Defense	Invasion and intracellular resistance	Mycobacterium virulence operon involved in an unknown function with Superoxide dismutase	FIG017534: hypothetical protein	fig|6666666.71390.peg.5794
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)	fig|6666666.71390.peg.3249, <br>fig|6666666.71390.peg.3251
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.71390.peg.2720, <br>fig|6666666.71390.peg.2721, <br>fig|6666666.71390.peg.5623, <br>fig|6666666.71390.peg.6477, <br>fig|6666666.71390.peg.2720, <br>fig|6666666.71390.peg.2721, <br>fig|6666666.71390.peg.5623, <br>fig|6666666.71390.peg.6477
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Potassium channel protein	fig|6666666.71390.peg.3738
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)	fig|6666666.71390.peg.3253
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.71390.peg.2857, <br>fig|6666666.71390.peg.3254, <br>fig|6666666.71390.peg.3353
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.71390.peg.2007
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Potassium efflux system KefA protein	fig|6666666.71390.peg.3588, <br>fig|6666666.71390.peg.4451
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)	fig|6666666.71390.peg.3252
Potassium metabolism	Potassium metabolism - no subcategory	Potassium homeostasis	Large-conductance mechanosensitive channel	fig|6666666.71390.peg.3348
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.71390.peg.781
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	DUF1794	fig|6666666.71390.peg.5682, <br>fig|6666666.71390.peg.7312
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Ferredoxin, 2Fe-2S	fig|6666666.71390.peg.4289, <br>fig|6666666.71390.peg.4292
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.71390.peg.3892
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Iron-sulfur cluster regulator SufR	fig|6666666.71390.peg.775
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	fig|6666666.71390.peg.780
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.71390.peg.777
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.71390.peg.778
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	probable iron binding protein from the HesB_IscA_SufA family	fig|6666666.71390.peg.1126
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.71390.peg.216, <br>fig|6666666.71390.peg.2239, <br>fig|6666666.71390.peg.4682, <br>fig|6666666.71390.peg.5874
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.71390.peg.779
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.71390.peg.776
Miscellaneous	Plant-Prokaryote DOE project	Iron-sulfur cluster assembly	Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	fig|6666666.71390.peg.7308
Miscellaneous	Miscellaneous - no subcategory	Phosphoglycerate mutase protein family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.71390.peg.149, <br>fig|6666666.71390.peg.1226, <br>fig|6666666.71390.peg.4790
Miscellaneous	Miscellaneous - no subcategory	Dioxygenases (EC 1.14.12.-)	Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)	fig|6666666.71390.peg.3799
Miscellaneous	Miscellaneous - no subcategory	Dioxygenases (EC 1.14.12.-)	3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-)	fig|6666666.71390.peg.4078, <br>fig|6666666.71390.peg.4093
Miscellaneous	Miscellaneous - no subcategory	Dioxygenases (EC 1.14.12.-)	3-phenylpropionate dioxygenase ferredoxin subunit	fig|6666666.71390.peg.3511, <br>fig|6666666.71390.peg.4080
Miscellaneous	Miscellaneous - no subcategory	Dioxygenases (EC 1.14.12.-)	Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein (EC 1.14.12.18)	fig|6666666.71390.peg.4092
Miscellaneous	Miscellaneous - no subcategory	Dioxygenases (EC 1.14.12.-)	Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)	fig|6666666.71390.peg.3800
Miscellaneous	Miscellaneous - no subcategory	Muconate lactonizing enzyme family	Muconate cycloisomerase (EC 5.5.1.1)	fig|6666666.71390.peg.3797
Miscellaneous	Miscellaneous - no subcategory	Muconate lactonizing enzyme family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.71390.peg.1878, <br>fig|6666666.71390.peg.4622
Miscellaneous	Miscellaneous - no subcategory	Muconate lactonizing enzyme family	Galactonate dehydratase (EC 4.2.1.6)	fig|6666666.71390.peg.6177
Miscellaneous	Miscellaneous - no subcategory	Lignin degradation fragments	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	fig|6666666.71390.peg.6991
Miscellaneous	Miscellaneous - no subcategory	DedA family of inner membrane proteins	DedA family protein paralog	fig|6666666.71390.peg.804
Miscellaneous	Miscellaneous - no subcategory	DedA family of inner membrane proteins	DedA protein	fig|6666666.71390.peg.7250
Miscellaneous	Miscellaneous - no subcategory	Aromatic dioxygenase mess	Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)	fig|6666666.71390.peg.3799
Miscellaneous	Miscellaneous - no subcategory	Aromatic dioxygenase mess	3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-)	fig|6666666.71390.peg.4078, <br>fig|6666666.71390.peg.4093
Miscellaneous	Miscellaneous - no subcategory	Aromatic dioxygenase mess	3-phenylpropionate dioxygenase ferredoxin subunit	fig|6666666.71390.peg.3511, <br>fig|6666666.71390.peg.4080
Miscellaneous	Miscellaneous - no subcategory	Aromatic dioxygenase mess	3-carboxyethylcatechol 2,3-dioxygenase (EC 1.13.11.16)	fig|6666666.71390.peg.2037
Miscellaneous	Miscellaneous - no subcategory	Aromatic dioxygenase mess	2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39)	fig|6666666.71390.peg.4076, <br>fig|6666666.71390.peg.4082
Miscellaneous	Miscellaneous - no subcategory	Aromatic dioxygenase mess	Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein (EC 1.14.12.18)	fig|6666666.71390.peg.4092
Miscellaneous	Miscellaneous - no subcategory	Aromatic dioxygenase mess	Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)	fig|6666666.71390.peg.3800
Miscellaneous	Miscellaneous - no subcategory	Bacillus subtilis scratch - gjo	Ku domain protein	fig|6666666.71390.peg.7621
Miscellaneous	Miscellaneous - no subcategory	Bacillus subtilis scratch - gjo	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.71390.peg.7631
Miscellaneous	Miscellaneous - no subcategory	Broadly distributed proteins not in subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.71390.peg.630, <br>fig|6666666.71390.peg.5868
Miscellaneous	Miscellaneous - no subcategory	Broadly distributed proteins not in subsystems	UPF0225 protein YchJ	fig|6666666.71390.peg.3786
Miscellaneous	Miscellaneous - no subcategory	Broadly distributed proteins not in subsystems	UPF0028 protein YchK	fig|6666666.71390.peg.3178
Miscellaneous	Miscellaneous - no subcategory	Broadly distributed proteins not in subsystems	Putative oxidoreductase YncB	fig|6666666.71390.peg.6529, <br>fig|6666666.71390.peg.6836
Miscellaneous	Miscellaneous - no subcategory	Dioxygenases (EC 1.13.11.-)	3-carboxyethylcatechol 2,3-dioxygenase (EC 1.13.11.16)	fig|6666666.71390.peg.2037
Miscellaneous	Miscellaneous - no subcategory	Dioxygenases (EC 1.13.11.-)	2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39)	fig|6666666.71390.peg.4076, <br>fig|6666666.71390.peg.4082
Phages, Prophages, Transposable elements, Plasmids	Phages, Prophages	Phage packaging machinery	Phage terminase, large subunit	fig|6666666.71390.peg.3578
Phages, Prophages, Transposable elements, Plasmids	Phages, Prophages	Phage capsid proteins	Phage capsid and scaffold	fig|6666666.71390.peg.3577
Phages, Prophages, Transposable elements, Plasmids	Phages, Prophages	Phage capsid proteins	Phage major capsid protein	fig|6666666.71390.peg.3574
Phages, Prophages, Transposable elements, Plasmids	Phages, Prophages	Phage lysis modules	Phage endolysin	fig|6666666.71390.peg.3208, <br>fig|6666666.71390.peg.7285
Phages, Prophages, Transposable elements, Plasmids	Phages, Prophages	Phage lysis modules	Mycobacteriophage lysis protein, LysB	fig|6666666.71390.peg.7286
Membrane Transport	ABC transporters	ABC transporter alkylphosphonate (TC 3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)	fig|6666666.71390.peg.7142
Membrane Transport	ABC transporters	ABC transporter alkylphosphonate (TC 3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.71390.peg.7143
Membrane Transport	ABC transporters	ABC transporter alkylphosphonate (TC 3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.71390.peg.7144
Membrane Transport	ABC transporters	ABC transporter oligopeptide (TC 3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.71390.peg.211, <br>fig|6666666.71390.peg.2831
Membrane Transport	ABC transporters	ABC transporter oligopeptide (TC 3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.71390.peg.747, <br>fig|6666666.71390.peg.2223, <br>fig|6666666.71390.peg.2830, <br>fig|6666666.71390.peg.2832, <br>fig|6666666.71390.peg.6027
Membrane Transport	ABC transporters	ABC transporter oligopeptide (TC 3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.71390.peg.2220, <br>fig|6666666.71390.peg.6260, <br>fig|6666666.71390.peg.6776, <br>fig|6666666.71390.peg.7131
Membrane Transport	ABC transporters	ABC transporter oligopeptide (TC 3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.71390.peg.6061, <br>fig|6666666.71390.peg.6259, <br>fig|6666666.71390.peg.6774, <br>fig|6666666.71390.peg.7132
Membrane Transport	ABC transporters	ABC transporter oligopeptide (TC 3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.71390.peg.582, <br>fig|6666666.71390.peg.2224, <br>fig|6666666.71390.peg.2834, <br>fig|6666666.71390.peg.7135
Membrane Transport	ABC transporters	ABC transporter branched-chain amino acid (TC 3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	fig|6666666.71390.peg.922, <br>fig|6666666.71390.peg.4503, <br>fig|6666666.71390.peg.4904, <br>fig|6666666.71390.peg.6962
Membrane Transport	ABC transporters	ABC transporter branched-chain amino acid (TC 3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.71390.peg.925, <br>fig|6666666.71390.peg.4506, <br>fig|6666666.71390.peg.4906, <br>fig|6666666.71390.peg.6965
Membrane Transport	ABC transporters	ABC transporter branched-chain amino acid (TC 3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.71390.peg.923, <br>fig|6666666.71390.peg.4504, <br>fig|6666666.71390.peg.6963
Membrane Transport	ABC transporters	ABC transporter branched-chain amino acid (TC 3.A.1.4.1)	Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	fig|6666666.71390.peg.921, <br>fig|6666666.71390.peg.5558
Membrane Transport	ABC transporters	ABC transporter branched-chain amino acid (TC 3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	fig|6666666.71390.peg.924, <br>fig|6666666.71390.peg.4505, <br>fig|6666666.71390.peg.4905, <br>fig|6666666.71390.peg.6964
Membrane Transport	ABC transporters	ABC transporter dipeptide (TC 3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.71390.peg.368, <br>fig|6666666.71390.peg.6025, <br>fig|6666666.71390.peg.6772, <br>fig|6666666.71390.peg.7133
Membrane Transport	ABC transporters	ABC transporter dipeptide (TC 3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.71390.peg.6060
Membrane Transport	ABC transporters	ABC transporter dipeptide (TC 3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.71390.peg.212, <br>fig|6666666.71390.peg.366
Membrane Transport	ABC transporters	ABC transporter dipeptide (TC 3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.71390.peg.367, <br>fig|6666666.71390.peg.544, <br>fig|6666666.71390.peg.2222, <br>fig|6666666.71390.peg.6026, <br>fig|6666666.71390.peg.6062, <br>fig|6666666.71390.peg.6258, <br>fig|6666666.71390.peg.6773, <br>fig|6666666.71390.peg.7134
Membrane Transport	ABC transporters	ABC transporter dipeptide (TC 3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.71390.peg.369, <br>fig|6666666.71390.peg.6023, <br>fig|6666666.71390.peg.6064
Membrane Transport	Protein translocation across cytoplasmic membrane	Bacterial signal recognition particle (SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.71390.peg.2323
Membrane Transport	Protein translocation across cytoplasmic membrane	Bacterial signal recognition particle (SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.71390.peg.2319
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	Putative ESX-1 secretion system gating protein PPE68	fig|6666666.71390.peg.5133, <br>fig|6666666.71390.peg.5270
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	RD1 region associated protein Rv3865	fig|6666666.71390.peg.5278
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	Putative ESX-1 secretion system component Rv3869	fig|6666666.71390.peg.5274
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	FtsK/SpoIIIE family protein Rv3871, component of ESX-1 secretion system	fig|6666666.71390.peg.5272
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	RD1 region associated protein Rv3876	fig|6666666.71390.peg.2467, <br>fig|6666666.71390.peg.4685, <br>fig|6666666.71390.peg.5266
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	Putative ESX-1 secretion system component Rv3877	fig|6666666.71390.peg.971, <br>fig|6666666.71390.peg.2306, <br>fig|6666666.71390.peg.4662, <br>fig|6666666.71390.peg.5265, <br>fig|6666666.71390.peg.5410
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	10 kDa culture filtrate antigen CFP-10 (EsxB)	fig|6666666.71390.peg.5269
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	RD1 region associated protein Rv3866	fig|6666666.71390.peg.5277
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	6 kDa early secretory antigenic target ESAT-6 (EsxA)	fig|6666666.71390.peg.5268
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	AAA family ATPase, ESX-1 secretion system component Rv3868	fig|6666666.71390.peg.5275, <br>fig|6666666.71390.peg.5375, <br>fig|6666666.71390.peg.7097
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	RD1 region associated protein Rv3867	fig|6666666.71390.peg.5276
Membrane Transport	Protein translocation across cytoplasmic membrane	ESAT-6 proteins secretion system in Actinobacteria	FtsK/SpoIIIE family protein Rv3870, component of ESX-1 secretion system	fig|6666666.71390.peg.5273
Membrane Transport	Protein translocation across cytoplasmic membrane	Twin-arginine translocation system	Twin-arginine translocation protein TatC	fig|6666666.71390.peg.1290
Membrane Transport	Protein translocation across cytoplasmic membrane	Twin-arginine translocation system	Twin-arginine translocation protein TatA	fig|6666666.71390.peg.1289
Membrane Transport	Protein translocation across cytoplasmic membrane	Twin-arginine translocation system	Twin-arginine translocation protein TatB	fig|6666666.71390.peg.2923
Membrane Transport	Cation transporters	Magnesium transport	Mg(2+) transport ATPase protein C	fig|6666666.71390.peg.4824
Membrane Transport	Cation transporters	Magnesium transport	Magnesium and cobalt transport protein CorA	fig|6666666.71390.peg.2909, <br>fig|6666666.71390.peg.6398
Membrane Transport	Cation transporters	Magnesium transport	Magnesium and cobalt efflux protein CorC	fig|6666666.71390.peg.263, <br>fig|6666666.71390.peg.1719, <br>fig|6666666.71390.peg.1720
Membrane Transport	Cation transporters	Magnesium transport	Mg/Co/Ni transporter MgtE	fig|6666666.71390.peg.2919
Membrane Transport	Cation transporters	Magnesium transport	Mg(2+) transport ATPase, P-type (EC 3.6.3.2)	fig|6666666.71390.peg.1648
Membrane Transport	Cation transporters	Transport of Nickel and Cobalt	HoxN/HupN/NixA family nickel/cobalt transporter	fig|6666666.71390.peg.2504
Membrane Transport	Cation transporters	Transport of Nickel and Cobalt	Predicted cobalt transporter CbtA	fig|6666666.71390.peg.6297
Membrane Transport	Cation transporters	Copper Transport System	Conserved membrane protein in copper uptake, YcnI	fig|6666666.71390.peg.5787
Membrane Transport	Cation transporters	Copper Transport System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.71390.peg.2853, <br>fig|6666666.71390.peg.3260, <br>fig|6666666.71390.peg.6621
Membrane Transport	Cation transporters	Copper transport and blue copper proteins	Copper binding protein, plastocyanin/azurin family	fig|6666666.71390.peg.1812, <br>fig|6666666.71390.peg.3957
Membrane Transport	Uni- Sym- and Antiporters	Multi-subunit cation antiporter	Na(+) H(+) antiporter subunit F	fig|6666666.71390.peg.4875
Membrane Transport	Uni- Sym- and Antiporters	Multi-subunit cation antiporter	Na(+) H(+) antiporter subunit E	fig|6666666.71390.peg.4874
Membrane Transport	Uni- Sym- and Antiporters	Multi-subunit cation antiporter	Na(+) H(+) antiporter subunit B	fig|6666666.71390.peg.4871
Membrane Transport	Uni- Sym- and Antiporters	Multi-subunit cation antiporter	Na(+) H(+) antiporter subunit A	fig|6666666.71390.peg.4871
Membrane Transport	Uni- Sym- and Antiporters	Multi-subunit cation antiporter	Na(+) H(+) antiporter subunit C	fig|6666666.71390.peg.4872
Membrane Transport	Uni- Sym- and Antiporters	Multi-subunit cation antiporter	Na(+) H(+) antiporter subunit D	fig|6666666.71390.peg.4873
Membrane Transport	Uni- Sym- and Antiporters	Multi-subunit cation antiporter	Na(+) H(+) antiporter subunit G	fig|6666666.71390.peg.4876
Membrane Transport	Uni- Sym- and Antiporters	NhaA, NhaD and Sodium-dependent phosphate transporters	Na+/H+ antiporter NhaD type	fig|6666666.71390.peg.4867
Membrane Transport	Uni- Sym- and Antiporters	NhaA, NhaD and Sodium-dependent phosphate transporters	Na+/H+ antiporter NhaA type	fig|6666666.71390.peg.2734, <br>fig|6666666.71390.peg.6485
Membrane Transport	Membrane Transport - no subcategory	Citrate Utilization System (CitAB, CitH, and tctABC)	Response regulator CitB of citrate metabolism	fig|6666666.71390.peg.1186
Membrane Transport	Membrane Transport - no subcategory	Citrate Utilization System (CitAB, CitH, and tctABC)	CitH citrate transporter	fig|6666666.71390.peg.6444
Membrane Transport	Membrane Transport - no subcategory	Citrate Utilization System (CitAB, CitH, and tctABC)	TctC citrate transporter	fig|6666666.71390.peg.1188, <br>fig|6666666.71390.peg.4526
Membrane Transport	Membrane Transport - no subcategory	Citrate Utilization System (CitAB, CitH, and tctABC)	Signal transduction histidine kinase CitA regulating citrate metabolism	fig|6666666.71390.peg.1187
Membrane Transport	Membrane Transport - no subcategory	Citrate Utilization System (CitAB, CitH, and tctABC)	TctB citrate transporter	fig|6666666.71390.peg.1189, <br>fig|6666666.71390.peg.4527
Membrane Transport	Membrane Transport - no subcategory	Citrate Utilization System (CitAB, CitH, and tctABC)	TctA citrate transporter	fig|6666666.71390.peg.1190
Membrane Transport	Membrane Transport - no subcategory	Tricarboxylate transport system	Tricarboxylate transport membrane protein TctA	fig|6666666.71390.peg.1403, <br>fig|6666666.71390.peg.4528, <br>fig|6666666.71390.peg.6416, <br>fig|6666666.71390.peg.6988
Membrane Transport	Membrane Transport - no subcategory	Tricarboxylate transport system	Tricarboxylate transport protein TctB	fig|6666666.71390.peg.6415
Membrane Transport	Membrane Transport - no subcategory	Tricarboxylate transport system	Tricarboxylate transport protein TctC	fig|6666666.71390.peg.6414, <br>fig|6666666.71390.peg.6989
Membrane Transport	Membrane Transport - no subcategory	ECF class transporters	Candidate substrate-specific domain of ECF transporters in Mycobacteria	fig|6666666.71390.peg.299
Membrane Transport	Membrane Transport - no subcategory	ECF class transporters	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.71390.peg.7731
Membrane Transport	Membrane Transport - no subcategory	ECF class transporters	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.71390.peg.7729
Membrane Transport	Membrane Transport - no subcategory	ECF class transporters	Transmembrane component of energizing module of ECF transporters in Mycobacteria	fig|6666666.71390.peg.300
Membrane Transport	Membrane Transport - no subcategory	ECF class transporters	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	fig|6666666.71390.peg.7730
Membrane Transport	Membrane Transport - no subcategory	ECF class transporters	Duplicated ATPase component of energizing module of predicted ECF transporter in Mycobacteria	fig|6666666.71390.peg.299
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	Heme, hemin uptake and utilization systems in GramPositives	Iron-dependent repressor IdeR/DtxR	fig|6666666.71390.peg.2645
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	Heme, hemin uptake and utilization systems in GramPositives	Heme oxygenase (EC 1.14.99.3)	fig|6666666.71390.peg.5310
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	Ferrous iron transporter EfeUOB, low-pH-induced	Ferrous iron transport peroxidase EfeB	fig|6666666.71390.peg.3275
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	Ferrous iron transporter EfeUOB, low-pH-induced	Ferrous iron transport permease EfeU	fig|6666666.71390.peg.3273
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	Ferrous iron transporter EfeUOB, low-pH-induced	Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain	fig|6666666.71390.peg.3274
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	ABC transporter [iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , permease component	fig|6666666.71390.peg.6734
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	ABC transporter [iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component	fig|6666666.71390.peg.6735
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	ABC transporter [iron.B12.siderophore.hemin]	ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component	fig|6666666.71390.peg.6732
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	Encapsulating protein for DyP-type peroxidase and ferritin-like protein oligomers	Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup	fig|6666666.71390.peg.7288, <br>fig|6666666.71390.peg.7594
Iron acquisition and metabolism	Iron acquisition and metabolism - no subcategory	Encapsulating protein for DyP-type peroxidase and ferritin-like protein oligomers	Encapsulating protein for a DyP-type peroxidase or ferritin-like protein oligomers	fig|6666666.71390.peg.7287, <br>fig|6666666.71390.peg.7595
RNA Metabolism	RNA processing and modification	RNA pseudouridine syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.71390.peg.3975
RNA Metabolism	RNA processing and modification	RNA pseudouridine syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.71390.peg.832
RNA Metabolism	RNA processing and modification	RNA pseudouridine syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.71390.peg.1469
RNA Metabolism	RNA processing and modification	RNA pseudouridine syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.71390.peg.2547
RNA Metabolism	RNA processing and modification	RNA pseudouridine syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.71390.peg.4212
RNA Metabolism	RNA processing and modification	tRNA nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.71390.peg.5456
RNA Metabolism	RNA processing and modification	Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.71390.peg.2624
RNA Metabolism	RNA processing and modification	Ribonucleases in Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.71390.peg.2338
RNA Metabolism	RNA processing and modification	Ribonucleases in Bacillus	Ribonuclease J2 (endoribonuclease in RNA processing)	fig|6666666.71390.peg.2598
RNA Metabolism	RNA processing and modification	RNA 3@1-terminal phosphate cyclase	RNA 3@1-terminal phosphate cyclase (EC 6.5.1.4)	fig|6666666.71390.peg.191
RNA Metabolism	RNA processing and modification	RNA processing and degradation, bacterial	FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type	fig|6666666.71390.peg.2525
RNA Metabolism	RNA processing and modification	RNA processing and degradation, bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.71390.peg.2313
RNA Metabolism	RNA processing and modification	RNA processing and degradation, bacterial	Ribonuclease E inhibitor RraA	fig|6666666.71390.peg.4523, <br>fig|6666666.71390.peg.5782
RNA Metabolism	RNA processing and modification	RNA processing and degradation, bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.71390.peg.132
RNA Metabolism	RNA processing and modification	RNA processing and degradation, bacterial	3@1-to-5@1 oligoribonuclease (orn)	fig|6666666.71390.peg.9
RNA Metabolism	RNA processing and modification	RNA methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.71390.peg.258
RNA Metabolism	RNA processing and modification	RNA methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.71390.peg.2723
RNA Metabolism	RNA processing and modification	RNA methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.71390.peg.3301
RNA Metabolism	RNA processing and modification	RNA methylation	23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.71390.peg.6316
RNA Metabolism	RNA processing and modification	RNA methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.71390.peg.6602
RNA Metabolism	RNA processing and modification	RNA methylation	23S rRNA N-6-methyltransferase ErmCX	fig|6666666.71390.peg.4047
RNA Metabolism	RNA processing and modification	RNA methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.71390.peg.2453
RNA Metabolism	RNA processing and modification	RNA methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.71390.peg.2334
RNA Metabolism	RNA processing and modification	RNA methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.71390.peg.5441
RNA Metabolism	RNA processing and modification	RNA methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.71390.peg.2240
RNA Metabolism	RNA processing and modification	RNA methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.71390.peg.2308
RNA Metabolism	RNA processing and modification	ATP-dependent RNA helicases, bacterial	Cold-shock DEAD-box protein A	fig|6666666.71390.peg.2893
RNA Metabolism	RNA processing and modification	16S rRNA modification within P site of ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.71390.peg.1166, <br>fig|6666666.71390.peg.2485, <br>fig|6666666.71390.peg.5357, <br>fig|6666666.71390.peg.6000
RNA Metabolism	RNA processing and modification	16S rRNA modification within P site of ribosome	Cell division protein MraZ	fig|6666666.71390.peg.1163
RNA Metabolism	RNA processing and modification	16S rRNA modification within P site of ribosome	rRNA small subunit methyltransferase H	fig|6666666.71390.peg.1164
RNA Metabolism	RNA processing and modification	16S rRNA modification within P site of ribosome	rRNA small subunit methyltransferase I	fig|6666666.71390.peg.3309
RNA Metabolism	RNA processing and modification	Ribonuclease H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.71390.peg.5909, <br>fig|6666666.71390.peg.7636
RNA Metabolism	RNA processing and modification	Ribonuclease H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.71390.peg.2338
RNA Metabolism	RNA processing and modification	Ribonuclease H	Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	fig|6666666.71390.peg.2339
RNA Metabolism	RNA processing and modification	Queuosine-Archaeosine Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.71390.peg.598, <br>fig|6666666.71390.peg.599, <br>fig|6666666.71390.peg.1237, <br>fig|6666666.71390.peg.5364
RNA Metabolism	RNA processing and modification	Queuosine-Archaeosine Biosynthesis	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.71390.peg.4119
RNA Metabolism	RNA processing and modification	Queuosine-Archaeosine Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.71390.peg.6283
RNA Metabolism	RNA processing and modification	Queuosine-Archaeosine Biosynthesis	Putative preQ0 transporter	fig|6666666.71390.peg.6812
RNA Metabolism	RNA processing and modification	Queuosine-Archaeosine Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.71390.peg.1271, <br>fig|6666666.71390.peg.2452, <br>fig|6666666.71390.peg.3487, <br>fig|6666666.71390.peg.3653, <br>fig|6666666.71390.peg.4207, <br>fig|6666666.71390.peg.5657, <br>fig|6666666.71390.peg.6794
RNA Metabolism	RNA processing and modification	Queuosine-Archaeosine Biosynthesis	glutamyl-Q-tRNA synthetase	fig|6666666.71390.peg.6013
RNA Metabolism	RNA processing and modification	Queuosine-Archaeosine Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.71390.peg.6006
RNA Metabolism	RNA processing and modification	tRNA processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.71390.peg.3932
RNA Metabolism	RNA processing and modification	tRNA processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.71390.peg.5982
RNA Metabolism	RNA processing and modification	tRNA processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.71390.peg.2624
RNA Metabolism	RNA processing and modification	tRNA processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.71390.peg.2738
RNA Metabolism	RNA processing and modification	tRNA processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.71390.peg.2001
RNA Metabolism	RNA processing and modification	tRNA processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.71390.peg.2547
RNA Metabolism	RNA processing and modification	tRNA processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.71390.peg.4212
RNA Metabolism	Transcription	Transcription initiation, bacterial sigma factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.71390.peg.1078, <br>fig|6666666.71390.peg.3793, <br>fig|6666666.71390.peg.7430
RNA Metabolism	Transcription	Transcription initiation, bacterial sigma factors	RNA polymerase sigma factor RpoD	fig|6666666.71390.peg.2708
RNA Metabolism	Transcription	Transcription initiation, bacterial sigma factors	RNA polymerase sigma-70 factor	fig|6666666.71390.peg.2477, <br>fig|6666666.71390.peg.4146
RNA Metabolism	Transcription	Transcription initiation, bacterial sigma factors	RNA polymerase sigma factor RpoE	fig|6666666.71390.peg.530
RNA Metabolism	Transcription	Transcription initiation, bacterial sigma factors	RNA polymerase sigma factor SigB	fig|6666666.71390.peg.2646, <br>fig|6666666.71390.peg.3897
RNA Metabolism	Transcription	RNA polymerase bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.71390.peg.4214
RNA Metabolism	Transcription	RNA polymerase bacterial	DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6)	fig|6666666.71390.peg.4389
RNA Metabolism	Transcription	RNA polymerase bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.71390.peg.697
RNA Metabolism	Transcription	RNA polymerase bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.71390.peg.4390
RNA Metabolism	Transcription	Transcription factors bacterial	Transcription termination protein NusB	fig|6666666.71390.peg.669
RNA Metabolism	Transcription	Transcription factors bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.71390.peg.527
RNA Metabolism	Transcription	Transcription factors bacterial	Transcription elongation factor GreA	fig|6666666.71390.peg.3155, <br>fig|6666666.71390.peg.6031
RNA Metabolism	Transcription	Transcription factors bacterial	Transcription termination factor Rho	fig|6666666.71390.peg.504
RNA Metabolism	Transcription	Transcription factors bacterial	Transcription antitermination protein NusG	fig|6666666.71390.peg.4414
RNA Metabolism	Transcription	Transcription factors bacterial	Transcription-repair coupling factor	fig|6666666.71390.peg.3283
RNA Metabolism	Transcription	Transcription factors bacterial	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	fig|6666666.71390.peg.2521
RNA Metabolism	Transcription	Transcription factors bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.71390.peg.2519
RNA Metabolism	Transcription	Transcription factors bacterial	Transcription termination protein NusA	fig|6666666.71390.peg.2520
RNA Metabolism	Transcription	Rrf2 family transcriptional regulators	Predicted transcriptional regulator of sulfate adenylyltransferase, Rrf2 family	fig|6666666.71390.peg.2808
RNA Metabolism	Transcription	Rrf2 family transcriptional regulators	Predicted transcriptional regulator of 4-carboxymuconolactone decarboxylase, Rrf2 family	fig|6666666.71390.peg.3728
RNA Metabolism	Transcription	Rrf2 family transcriptional regulators	Nitrite-sensitive transcriptional repressor NsrR	fig|6666666.71390.peg.4421
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.71390.peg.131
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.71390.peg.3151, <br>fig|6666666.71390.peg.3837
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.71390.peg.65, <br>fig|6666666.71390.peg.3412
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming)	fig|6666666.71390.peg.7158
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.71390.peg.1089, <br>fig|6666666.71390.peg.4222, <br>fig|6666666.71390.peg.5449, <br>fig|6666666.71390.peg.5450
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)	fig|6666666.71390.peg.2870
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.71390.peg.3983, <br>fig|6666666.71390.peg.6930
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	phosphoribosyltransferase	fig|6666666.71390.peg.3990
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.71390.peg.2580
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Thymidine phosphorylase (EC 2.4.2.4)	fig|6666666.71390.peg.4004
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.71390.peg.686, <br>fig|6666666.71390.peg.1885
Nucleosides and Nucleotides	Pyrimidines	pyrimidine conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.71390.peg.1449
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Uracil permease	fig|6666666.71390.peg.4931
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.71390.peg.692
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.71390.peg.687
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.71390.peg.1221
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.71390.peg.690
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.71390.peg.5723
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.71390.peg.691
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.71390.peg.688, <br>fig|6666666.71390.peg.7237
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.71390.peg.686, <br>fig|6666666.71390.peg.1885
Nucleosides and Nucleotides	Pyrimidines	De Novo Pyrimidine Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.71390.peg.686
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.71390.peg.7265
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.71390.peg.7702
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.71390.peg.7305
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.71390.peg.3288
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.71390.peg.3865
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	fig|6666666.71390.peg.5033
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.71390.peg.2245, <br>fig|6666666.71390.peg.7701
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.71390.peg.7275
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.71390.peg.7270
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.71390.peg.7306
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.71390.peg.7702
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	fig|6666666.71390.peg.7282
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.71390.peg.7295
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	fig|6666666.71390.peg.3866
Nucleosides and Nucleotides	Purines	De Novo Purine Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.71390.peg.7283
Nucleosides and Nucleotides	Purines	Xanthine dehydrogenase subunits	Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	fig|6666666.71390.peg.165, <br>fig|6666666.71390.peg.7604
Nucleosides and Nucleotides	Purines	Xanthine dehydrogenase subunits	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.71390.peg.7603
Nucleosides and Nucleotides	Purines	Xanthine dehydrogenase subunits	Xanthine-uracil permease	fig|6666666.71390.peg.7601
Nucleosides and Nucleotides	Purines	Xanthine dehydrogenase subunits	CTP:molybdopterin cytidylyltransferase	fig|6666666.71390.peg.3895
Nucleosides and Nucleotides	Purines	Xanthine dehydrogenase subunits	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.71390.peg.164, <br>fig|6666666.71390.peg.7604
Nucleosides and Nucleotides	Purines	Xanthine Metabolism in Bacteria	Xanthine permease	fig|6666666.71390.peg.996
Nucleosides and Nucleotides	Purines	A hypothetical coupled to de Novo Purine Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.71390.peg.2245, <br>fig|6666666.71390.peg.7701
Nucleosides and Nucleotides	Purines	A hypothetical coupled to de Novo Purine Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.71390.peg.7702
Nucleosides and Nucleotides	Purines	A hypothetical coupled to de Novo Purine Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.71390.peg.7702
Nucleosides and Nucleotides	Purines	A hypothetical coupled to de Novo Purine Biosynthesis	FIG021574: Possible membrane protein related to de Novo purine biosynthesis	fig|6666666.71390.peg.7700
Nucleosides and Nucleotides	Purines	Purine Utilization	Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS	fig|6666666.71390.peg.3433, <br>fig|6666666.71390.peg.7168
Nucleosides and Nucleotides	Purines	Purine Utilization	Cytosine/purine/uracil/thiamine/allantoin permease family protein	fig|6666666.71390.peg.64, <br>fig|6666666.71390.peg.173, <br>fig|6666666.71390.peg.315, <br>fig|6666666.71390.peg.358, <br>fig|6666666.71390.peg.592, <br>fig|6666666.71390.peg.963, <br>fig|6666666.71390.peg.1001, <br>fig|6666666.71390.peg.3076, <br>fig|6666666.71390.peg.3093, <br>fig|6666666.71390.peg.3467, <br>fig|6666666.71390.peg.5327, <br>fig|6666666.71390.peg.6084, <br>fig|6666666.71390.peg.7128, <br>fig|6666666.71390.peg.7239
Nucleosides and Nucleotides	Purines	Purine Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.71390.peg.164, <br>fig|6666666.71390.peg.7604
Nucleosides and Nucleotides	Purines	Purine Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.71390.peg.7028
Nucleosides and Nucleotides	Purines	Purine Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.71390.peg.7603
Nucleosides and Nucleotides	Purines	Purine Utilization	Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	fig|6666666.71390.peg.165, <br>fig|6666666.71390.peg.7604
Nucleosides and Nucleotides	Purines	Purine Utilization	Xanthine permease	fig|6666666.71390.peg.996
Nucleosides and Nucleotides	Purines	Purine Utilization	Guanine deaminase (EC 3.5.4.3)	fig|6666666.71390.peg.7602
Nucleosides and Nucleotides	Purines	Purine conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.71390.peg.4131
Nucleosides and Nucleotides	Purines	Purine conversions	Adenosine kinase (EC 2.7.1.20)	fig|6666666.71390.peg.1128
Nucleosides and Nucleotides	Purines	Purine conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.71390.peg.7259
Nucleosides and Nucleotides	Purines	Purine conversions	Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.71390.peg.185, <br>fig|6666666.71390.peg.1721, <br>fig|6666666.71390.peg.4142, <br>fig|6666666.71390.peg.4143
Nucleosides and Nucleotides	Purines	Purine conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.71390.peg.6270
Nucleosides and Nucleotides	Purines	Purine conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.71390.peg.7270
Nucleosides and Nucleotides	Purines	Purine conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.71390.peg.2286
Nucleosides and Nucleotides	Purines	Purine conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.71390.peg.583
Nucleosides and Nucleotides	Purines	Purine conversions	Guanine deaminase (EC 3.5.4.3)	fig|6666666.71390.peg.7602
Nucleosides and Nucleotides	Purines	Purine conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.71390.peg.4256
Nucleosides and Nucleotides	Purines	Purine conversions	Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	fig|6666666.71390.peg.4119
Nucleosides and Nucleotides	Purines	Purine conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.71390.peg.131
Nucleosides and Nucleotides	Purines	Purine conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.71390.peg.1869
Nucleosides and Nucleotides	Purines	Purine conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.71390.peg.3983, <br>fig|6666666.71390.peg.6930
Nucleosides and Nucleotides	Purines	Purine conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.71390.peg.4000
Nucleosides and Nucleotides	Purines	Purine conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.71390.peg.696
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Ribonucleotide reduction	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.71390.peg.3399, <br>fig|6666666.71390.peg.5891
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Ribonucleotide reduction	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.71390.peg.3393
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Ribonucleotide reduction	Ribonucleotide reduction protein NrdI	fig|6666666.71390.peg.3394
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Ribonucleotide reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.71390.peg.2638
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Ribonucleotide reduction	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.71390.peg.2190
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Hydantoin metabolism	Hydantoin permease	fig|6666666.71390.peg.985, <br>fig|6666666.71390.peg.7394
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Hydantoin metabolism	Beta-ureidopropionase (EC 3.5.1.6)	fig|6666666.71390.peg.4910
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Hydantoin metabolism	Hydantoin racemase (EC 5.1.99.-)	fig|6666666.71390.peg.984
Nucleosides and Nucleotides	Nucleosides and Nucleotides - no subcategory	Adenosyl nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.71390.peg.3983, <br>fig|6666666.71390.peg.6930
Nucleosides and Nucleotides	Detoxification	Nucleoside triphosphate pyrophosphohydrolase MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.71390.peg.3281
Nucleosides and Nucleotides	Detoxification	Nudix proteins (nucleoside triphosphate hydrolases)	Putative Nudix hydrolase YfcD (EC 3.6.-.-)	fig|6666666.71390.peg.4316
Nucleosides and Nucleotides	Detoxification	Nudix proteins (nucleoside triphosphate hydrolases)	Nudix hydrolase family protein PA3470	fig|6666666.71390.peg.271
Nucleosides and Nucleotides	Detoxification	Nudix proteins (nucleoside triphosphate hydrolases)	Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.71390.peg.2715
Nucleosides and Nucleotides	Detoxification	Nudix proteins (nucleoside triphosphate hydrolases)	Hypothetical nudix hydrolase YeaB	fig|6666666.71390.peg.5617, <br>fig|6666666.71390.peg.6169, <br>fig|6666666.71390.peg.7241
Nucleosides and Nucleotides	Detoxification	Nudix proteins (nucleoside triphosphate hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.71390.peg.1450, <br>fig|6666666.71390.peg.2954
Nucleosides and Nucleotides	Detoxification	Nudix proteins (nucleoside triphosphate hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.71390.peg.3737
Nucleosides and Nucleotides	Detoxification	Housecleaning nucleoside triphosphate pyrophosphatases	Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.71390.peg.2715
Nucleosides and Nucleotides	Detoxification	Housecleaning nucleoside triphosphate pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.71390.peg.2003
Protein Metabolism	Protein folding	GroEL GroES	Heat shock protein GrpE	fig|6666666.71390.peg.7213
Protein Metabolism	Protein folding	GroEL GroES	Heat-inducible transcription repressor HrcA	fig|6666666.71390.peg.256
Protein Metabolism	Protein folding	GroEL GroES	Chaperone protein DnaK	fig|6666666.71390.peg.7212
Protein Metabolism	Protein folding	GroEL GroES	Chaperone protein DnaJ	fig|6666666.71390.peg.257, <br>fig|6666666.71390.peg.7214
Protein Metabolism	Protein folding	GroEL GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.71390.peg.4160
Protein Metabolism	Protein folding	GroEL GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.71390.peg.4159, <br>fig|6666666.71390.peg.4839
Protein Metabolism	Protein folding	Protein chaperones	Heat shock protein GrpE	fig|6666666.71390.peg.7213
Protein Metabolism	Protein folding	Protein chaperones	HspR, transcriptional repressor of DnaK operon	fig|6666666.71390.peg.1005, <br>fig|6666666.71390.peg.4694, <br>fig|6666666.71390.peg.7215
Protein Metabolism	Protein folding	Protein chaperones	Chaperone protein DnaK	fig|6666666.71390.peg.7212
Protein Metabolism	Protein folding	Protein chaperones	Chaperone protein DnaJ	fig|6666666.71390.peg.257, <br>fig|6666666.71390.peg.7214
Protein Metabolism	Protein folding	Protein chaperones	ClpB protein	fig|6666666.71390.peg.4232, <br>fig|6666666.71390.peg.7225, <br>fig|6666666.71390.peg.7585
Protein Metabolism	Protein folding	Periplasmic disulfide interchange	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.71390.peg.1490, <br>fig|6666666.71390.peg.4688
Protein Metabolism	Selenoproteins	Selenoprotein O	Selenoprotein O and cysteine-containing homologs	fig|6666666.71390.peg.2342
Protein Metabolism	Selenoproteins	Selenocysteine metabolism	selenocysteine-containing	fig|6666666.71390.peg.5162, <br>fig|6666666.71390.peg.5164
Protein Metabolism	Selenoproteins	Selenocysteine metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.71390.peg.5158
Protein Metabolism	Selenoproteins	Selenocysteine metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.71390.peg.5157
Protein Metabolism	Selenoproteins	Selenocysteine metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.71390.peg.5159
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.71390.peg.128
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.71390.peg.3304
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.71390.peg.826
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.71390.peg.509
Protein Metabolism	Protein biosynthesis	Translation initiation factors bacterial	Translation initiation factor 1	fig|6666666.71390.peg.4219
Protein Metabolism	Protein biosynthesis	Translation initiation factors bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.71390.peg.712
Protein Metabolism	Protein biosynthesis	Translation initiation factors bacterial	Translation initiation factor 3	fig|6666666.71390.peg.1379
Protein Metabolism	Protein biosynthesis	Translation initiation factors bacterial	Translation initiation factor 2	fig|6666666.71390.peg.694, <br>fig|6666666.71390.peg.1662, <br>fig|6666666.71390.peg.2523
Protein Metabolism	Protein biosynthesis	Translation initiation factors bacterial	Ribosome-binding factor A	fig|6666666.71390.peg.2524
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S18p, zinc-dependent	fig|6666666.71390.peg.5485, <br>fig|6666666.71390.peg.6326
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.71390.peg.4216
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S1p	fig|6666666.71390.peg.1341
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S6p	fig|6666666.71390.peg.5483
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.71390.peg.2560
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.71390.peg.4281, <br>fig|6666666.71390.peg.6325
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.71390.peg.4277
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S18p	fig|6666666.71390.peg.5485, <br>fig|6666666.71390.peg.6326
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.71390.peg.4326
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S20p	fig|6666666.71390.peg.177
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.71390.peg.4371
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.71390.peg.4181
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.71390.peg.4280
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.71390.peg.4215
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.71390.peg.6325
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.71390.peg.4331
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.71390.peg.4336
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S16p	fig|6666666.71390.peg.2331
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.71390.peg.4329
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.71390.peg.4370
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.71390.peg.2429
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S14p (S29e), zinc-dependent	fig|6666666.71390.peg.4281
Protein Metabolism	Protein biosynthesis	Ribosome SSU bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.71390.peg.4217
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.71390.peg.274
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.71390.peg.656
Protein Metabolism	Protein biosynthesis	Ribosome activity modulation	Ribosomal subunit interface protein	fig|6666666.71390.peg.1631, <br>fig|6666666.71390.peg.3830
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.71390.peg.4033
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	16S rRNA processing protein RimM	fig|6666666.71390.peg.2333
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.71390.peg.3975
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.71390.peg.832
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.71390.peg.3301
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.71390.peg.4163
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.71390.peg.2334
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.71390.peg.3332, <br>fig|6666666.71390.peg.4775
Protein Metabolism	Protein biosynthesis	Ribosome biogenesis bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.71390.peg.132
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.71390.peg.4278
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.71390.peg.4413
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.71390.peg.4282
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.71390.peg.4333
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.71390.peg.4284
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.71390.peg.499
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.71390.peg.4332
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L31p	fig|6666666.71390.peg.499, <br>fig|6666666.71390.peg.6321
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.71390.peg.4279
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L21p	fig|6666666.71390.peg.133
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.71390.peg.4283
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.71390.peg.4327
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.71390.peg.4276
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.71390.peg.6321
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.71390.peg.4412
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L33p, zinc-dependent	fig|6666666.71390.peg.4419
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.71390.peg.4328
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L25p	fig|6666666.71390.peg.3292
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.71390.peg.4335
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.71390.peg.4275
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.71390.peg.6324
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.71390.peg.4182
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.71390.peg.4330
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L34p	fig|6666666.71390.peg.5437
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.71390.peg.4394
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L9p	fig|6666666.71390.peg.5486
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.71390.peg.4393
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L28p	fig|6666666.71390.peg.2295, <br>fig|6666666.71390.peg.6323
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L19p	fig|6666666.71390.peg.2336
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L35p	fig|6666666.71390.peg.1380
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L36p	fig|6666666.71390.peg.4218
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L20p	fig|6666666.71390.peg.1381
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L32p	fig|6666666.71390.peg.3355
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L33p	fig|6666666.71390.peg.4419, <br>fig|6666666.71390.peg.6324
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L17p	fig|6666666.71390.peg.4213
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L27p	fig|6666666.71390.peg.134
Protein Metabolism	Protein biosynthesis	Ribosome LSU bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.71390.peg.4334, <br>fig|6666666.71390.peg.7492
Protein Metabolism	Protein biosynthesis	Programmed frameshift	Peptide chain release factor 2	fig|6666666.71390.peg.3589
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.71390.peg.6315
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.71390.peg.497
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Ribosome recycling factor	fig|6666666.71390.peg.2450
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.71390.peg.3293
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.71390.peg.4884
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Peptide chain release factor 3	fig|6666666.71390.peg.4443
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	tmRNA-binding protein SmpB	fig|6666666.71390.peg.3584
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Peptide chain release factor 1	fig|6666666.71390.peg.498
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.71390.peg.2488, <br>fig|6666666.71390.peg.2904, <br>fig|6666666.71390.peg.4255, <br>fig|6666666.71390.peg.7465
Protein Metabolism	Protein biosynthesis	Translation termination factors bacterial	Peptide chain release factor 2	fig|6666666.71390.peg.3589
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.71390.peg.601
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Asp and Asn	Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23)	fig|6666666.71390.peg.635
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Asp and Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.71390.peg.2255
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Asp and Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.71390.peg.2260
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Asp and Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.71390.peg.635
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Asp and Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.71390.peg.237, <br>fig|6666666.71390.peg.2256, <br>fig|6666666.71390.peg.4285, <br>fig|6666666.71390.peg.6254
Protein Metabolism	Protein biosynthesis	Translation elongation factors bacterial	Translation elongation factor G	fig|6666666.71390.peg.4369
Protein Metabolism	Protein biosynthesis	Translation elongation factors bacterial	Translation elongation factor LepA	fig|6666666.71390.peg.192
Protein Metabolism	Protein biosynthesis	Translation elongation factors bacterial	Translation elongation factor Tu	fig|6666666.71390.peg.4368
Protein Metabolism	Protein biosynthesis	Translation elongation factors bacterial	Translation elongation factor Ts	fig|6666666.71390.peg.2430
Protein Metabolism	Protein biosynthesis	Translation elongation factors bacterial	Translation elongation factor P	fig|6666666.71390.peg.668
Protein Metabolism	Protein biosynthesis	Translation elongation factors bacterial	Translation elongation factor G-related protein	fig|6666666.71390.peg.5716
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Phe-GAA	fig|6666666.71390.rna.33, <br>fig|6666666.71390.rna.88
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Leu-CAG	fig|6666666.71390.rna.74
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Arg-ACG	fig|6666666.71390.rna.32, <br>fig|6666666.71390.rna.79
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Val-GAC	fig|6666666.71390.rna.55
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Leu-CAA	fig|6666666.71390.rna.10, <br>fig|6666666.71390.rna.43
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Leu-GAG	fig|6666666.71390.rna.11
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Ala-CGC	fig|6666666.71390.rna.61
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Arg-CCG	fig|6666666.71390.rna.9, <br>fig|6666666.71390.rna.26, <br>fig|6666666.71390.rna.48
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Ala-GGC	fig|6666666.71390.rna.65
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Pro-CGG	fig|6666666.71390.rna.82
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Gly-CCC	fig|6666666.71390.rna.84
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Cys-GCA	fig|6666666.71390.rna.12, <br>fig|6666666.71390.rna.19, <br>fig|6666666.71390.rna.56
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Val-CAC	fig|6666666.71390.rna.58
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Pro-GGG	fig|6666666.71390.rna.16
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Gly-GCC	fig|6666666.71390.rna.38, <br>fig|6666666.71390.rna.57
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Trp-CCA	fig|6666666.71390.rna.24, <br>fig|6666666.71390.rna.67
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Ser-CGA	fig|6666666.71390.rna.80
Protein Metabolism	Protein biosynthesis	tRNAs	tRNA-Ser-GGA	fig|6666666.71390.rna.81
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.71390.peg.6293
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Lys	Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein	fig|6666666.71390.peg.1377
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Lys	Putative membrane protein found fused to lysyl-tRNA synthetase like protein	fig|6666666.71390.peg.1377
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.71390.peg.554
Protein Metabolism	Protein biosynthesis	Translation elongation factor G family	Translation elongation factor G	fig|6666666.71390.peg.4369
Protein Metabolism	Protein biosynthesis	Translation elongation factor G family	Translation elongation factor G-related protein	fig|6666666.71390.peg.5716
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Glu and Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.71390.peg.237, <br>fig|6666666.71390.peg.2256, <br>fig|6666666.71390.peg.4285, <br>fig|6666666.71390.peg.6254
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Glu and Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.71390.peg.2279
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Glu and Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.71390.peg.2260
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Glu and Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.71390.peg.2279
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Glu and Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.71390.peg.2255
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.71390.peg.5809
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.71390.peg.1439
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.71390.peg.5464
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.71390.peg.1394
Protein Metabolism	Protein biosynthesis	tRNA aminoacylation, Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.71390.peg.1395
Protein Metabolism	Protein processing and modification	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)	fig|6666666.71390.peg.3935
Protein Metabolism	Protein processing and modification	Lipoprotein Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.71390.peg.25, <br>fig|6666666.71390.peg.831
Protein Metabolism	Protein processing and modification	Lipoprotein Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.71390.peg.892, <br>fig|6666666.71390.peg.3263
Protein Metabolism	Protein processing and modification	Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.71390.peg.4172
Protein Metabolism	Protein processing and modification	Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.71390.peg.261
Protein Metabolism	Protein processing and modification	Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.71390.peg.837, <br>fig|6666666.71390.peg.4108
Protein Metabolism	Protein processing and modification	Inteins	intein-containing	fig|6666666.71390.peg.5487
Protein Metabolism	Protein processing and modification	Inteins	Translation initiation factor 2	fig|6666666.71390.peg.694, <br>fig|6666666.71390.peg.1662, <br>fig|6666666.71390.peg.2523
Protein Metabolism	Protein processing and modification	Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.71390.peg.6218
Protein Metabolism	Protein processing and modification	Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.71390.peg.1649, <br>fig|6666666.71390.peg.7506
Protein Metabolism	Protein processing and modification	Signal peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.71390.peg.2337
Protein Metabolism	Protein processing and modification	Signal peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.71390.peg.25, <br>fig|6666666.71390.peg.831
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.71390.peg.4990
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Urease accessory protein UreF	fig|6666666.71390.peg.1730, <br>fig|6666666.71390.peg.7399
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.71390.peg.4965
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)	fig|6666666.71390.peg.805
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.71390.peg.4969
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Urease accessory protein UreD	fig|6666666.71390.peg.1732, <br>fig|6666666.71390.peg.7401
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	fig|6666666.71390.peg.484
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Urease beta subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1728, <br>fig|6666666.71390.peg.7404
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.71390.peg.806, <br>fig|6666666.71390.peg.2021
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.71390.peg.4603, <br>fig|6666666.71390.peg.6322, <br>fig|6666666.71390.peg.6338, <br>fig|6666666.71390.peg.7035
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.71390.peg.4963
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Urease gamma subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1727
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Urease alpha subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1729, <br>fig|6666666.71390.peg.7403
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.71390.peg.4964, <br>fig|6666666.71390.peg.4968
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.71390.peg.4989
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	putative periplasmic protein kinase ArgK and related GTPases of G3E family	fig|6666666.71390.peg.807, <br>fig|6666666.71390.peg.2031
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	Urease accessory protein UreG	fig|6666666.71390.peg.1731, <br>fig|6666666.71390.peg.7402
Protein Metabolism	Protein processing and modification	G3E family of P-loop GTPases (metallocenter biosynthesis)	B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.71390.peg.2022
Protein Metabolism	Protein processing and modification	Ribosomal protein S5p acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.71390.peg.4277
Protein Metabolism	Protein processing and modification	Ribosomal protein S5p acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.71390.peg.3332, <br>fig|6666666.71390.peg.4775
Protein Metabolism	Protein processing and modification	Protein deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.71390.peg.6494
Protein Metabolism	Protein processing and modification	Protein deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.71390.peg.1082
Protein Metabolism	Protein processing and modification	Peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.71390.peg.5751
Protein Metabolism	Protein processing and modification	Peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.71390.peg.2744
Protein Metabolism	Protein degradation	Putative TldE-TldD proteolytic complex	TldD family protein, Actinobacterial subgroup	fig|6666666.71390.peg.313
Protein Metabolism	Protein degradation	Putative TldE-TldD proteolytic complex	TldE/PmbA family protein, Actinobacterial subgroup	fig|6666666.71390.peg.314
Protein Metabolism	Protein degradation	Aminopeptidases (EC 3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.71390.peg.54
Protein Metabolism	Protein degradation	Aminopeptidases (EC 3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.71390.peg.1118
Protein Metabolism	Protein degradation	Aminopeptidases (EC 3.4.11.-)	Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15)	fig|6666666.71390.peg.4936, <br>fig|6666666.71390.peg.4937
Protein Metabolism	Protein degradation	Protein degradation	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	fig|6666666.71390.peg.667, <br>fig|6666666.71390.peg.2050, <br>fig|6666666.71390.peg.2324, <br>fig|6666666.71390.peg.4901
Protein Metabolism	Protein degradation	Proteasome archaeal	Pup ligase PafA@1 paralog, possible component of postulated heterodimer PafA-PafA@1	fig|6666666.71390.peg.1276
Protein Metabolism	Protein degradation	Proteasome archaeal	Proteasome subunit alpha (EC 3.4.25.1), bacterial	fig|6666666.71390.peg.1279
Protein Metabolism	Protein degradation	Proteasome archaeal	Prokaryotic ubiquitin-like protein Pup	fig|6666666.71390.peg.1277
Protein Metabolism	Protein degradation	Proteasome archaeal	Pup ligase PafA, possible component of postulated heterodimer PafA-PafA@1	fig|6666666.71390.peg.1286
Protein Metabolism	Protein degradation	Proteasome archaeal	Proteasome subunit beta (EC 3.4.25.1), bacterial	fig|6666666.71390.peg.1278
Protein Metabolism	Protein degradation	Proteasome archaeal	Bacterial proteasome-activating AAA-ATPase (PAN)	fig|6666666.71390.peg.1268
Protein Metabolism	Protein degradation	Metallocarboxypeptidases (EC 3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.71390.peg.318, <br>fig|6666666.71390.peg.2326, <br>fig|6666666.71390.peg.2327, <br>fig|6666666.71390.peg.4019, <br>fig|6666666.71390.peg.6267
Protein Metabolism	Protein degradation	Metallocarboxypeptidases (EC 3.4.17.-)	Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)	fig|6666666.71390.peg.1963
Protein Metabolism	Protein degradation	Serine endopeptidase (EC 3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.71390.peg.4821
Protein Metabolism	Protein degradation	Proteolysis in bacteria, ATP-dependent	DNA repair protein RadA	fig|6666666.71390.peg.6309
Protein Metabolism	Protein degradation	Proteolysis in bacteria, ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.71390.peg.82
Protein Metabolism	Protein degradation	Proteolysis in bacteria, ATP-dependent	ATP-dependent Clp protease, ATP-binding subunit ClpC	fig|6666666.71390.peg.2755, <br>fig|6666666.71390.peg.6295
Protein Metabolism	Protein degradation	Proteolysis in bacteria, ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.71390.peg.80, <br>fig|6666666.71390.peg.81
Protein Metabolism	Protein degradation	Proteolysis in bacteria, ATP-dependent	ClpB protein	fig|6666666.71390.peg.4232, <br>fig|6666666.71390.peg.7225, <br>fig|6666666.71390.peg.7585
Protein Metabolism	Protein degradation	Proteolysis in bacteria, ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.71390.peg.1776
Protein Metabolism	Protein degradation	Proteolysis in bacteria, ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.71390.peg.1992
Protein Metabolism	Protein degradation	Omega peptidases (EC 3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.71390.peg.4084
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	YgjD and YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.71390.peg.4162
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Macromolecular synthesis operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.71390.peg.4162
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Macromolecular synthesis operon	RNA polymerase sigma factor RpoD	fig|6666666.71390.peg.2708
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Macromolecular synthesis operon	DNA primase (EC 2.7.7.-)	fig|6666666.71390.peg.287
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Macromolecular synthesis operon	Transamidase GatB domain protein	fig|6666666.71390.peg.6140
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Macromolecular synthesis operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.71390.peg.690
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Macromolecular synthesis operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.71390.peg.691
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.71390.peg.1166, <br>fig|6666666.71390.peg.2485, <br>fig|6666666.71390.peg.5357, <br>fig|6666666.71390.peg.6000
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Cell division protein FtsW	fig|6666666.71390.peg.1171, <br>fig|6666666.71390.peg.5356
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.71390.peg.723, <br>fig|6666666.71390.peg.2149, <br>fig|6666666.71390.peg.2249, <br>fig|6666666.71390.peg.2637, <br>fig|6666666.71390.peg.3209, <br>fig|6666666.71390.peg.3270, <br>fig|6666666.71390.peg.3757, <br>fig|6666666.71390.peg.4376, <br>fig|6666666.71390.peg.5255, <br>fig|6666666.71390.peg.5634, <br>fig|6666666.71390.peg.5974, <br>fig|6666666.71390.peg.6131, <br>fig|6666666.71390.peg.6134, <br>fig|6666666.71390.peg.6228
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.71390.peg.5443
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.71390.peg.1176
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.71390.peg.5443
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Cell division protein FtsK	fig|6666666.71390.peg.2605
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Cell division protein FtsQ	fig|6666666.71390.peg.1174
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.71390.peg.1466, <br>fig|6666666.71390.peg.3759, <br>fig|6666666.71390.peg.5442
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Septum formation protein Maf	fig|6666666.71390.peg.3877
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Cell division protein MraZ	fig|6666666.71390.peg.1163
Cell Division and Cell Cycle	Cell Division and Cell Cycle - no subcategory	Bacterial Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.71390.peg.1466, <br>fig|6666666.71390.peg.3759, <br>fig|6666666.71390.peg.5442
Motility and Chemotaxis	Motility and Chemotaxis - no subcategory	Bacterial Chemotaxis	Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)	fig|6666666.71390.peg.7656
Motility and Chemotaxis	Motility and Chemotaxis - no subcategory	Bacterial Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.71390.peg.369, <br>fig|6666666.71390.peg.6023, <br>fig|6666666.71390.peg.6064
Motility and Chemotaxis	Motility and Chemotaxis - no subcategory	Bacterial Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.71390.peg.2914
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.71390.peg.3380, <br>fig|6666666.71390.peg.6165, <br>fig|6666666.71390.peg.7006
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	Predicted signal-transduction protein containing cAMP-binding and CBS domains	fig|6666666.71390.peg.3496, <br>fig|6666666.71390.peg.3503
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.71390.peg.302, <br>fig|6666666.71390.peg.350, <br>fig|6666666.71390.peg.914, <br>fig|6666666.71390.peg.969, <br>fig|6666666.71390.peg.1119, <br>fig|6666666.71390.peg.1782, <br>fig|6666666.71390.peg.1978, <br>fig|6666666.71390.peg.2059, <br>fig|6666666.71390.peg.2859, <br>fig|6666666.71390.peg.3646, <br>fig|6666666.71390.peg.5493, <br>fig|6666666.71390.peg.5685, <br>fig|6666666.71390.peg.6219, <br>fig|6666666.71390.peg.6558
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.71390.peg.7297
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	ElaA protein	fig|6666666.71390.peg.2509
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	Prophage Clp protease-like protein	fig|6666666.71390.peg.4566
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	Purine cyclase-related protein	fig|6666666.71390.peg.1392
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.71390.peg.80, <br>fig|6666666.71390.peg.81
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.71390.peg.583
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	cAMP signaling in bacteria	Putative hemin-binding lipoprotein	fig|6666666.71390.peg.6023
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	LysR-family proteins in Salmonella enterica Typhimurium	LysR family transcriptional regulator STM3121	fig|6666666.71390.peg.7728
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	LysR-family proteins in Salmonella enterica Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.71390.peg.7599
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	LysR-family proteins in Salmonella enterica Typhimurium	LysR family transcriptional regulator YnfL	fig|6666666.71390.peg.3785
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	LysR-family proteins in Escherichia coli	Hydrogen peroxide-inducible genes activator	fig|6666666.71390.peg.7599
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	LysR-family proteins in Escherichia coli	LysR family transcriptional regulator YeiE	fig|6666666.71390.peg.5179
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	LysR-family proteins in Escherichia coli	Cyn operon transcriptional activator	fig|6666666.71390.peg.332
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	LysR-family proteins in Escherichia coli	LysR family transcriptional regulator YnfL	fig|6666666.71390.peg.3785
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	DNA-binding regulatory proteins, strays	Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family)	fig|6666666.71390.peg.3798, <br>fig|6666666.71390.peg.6253
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	fig|6666666.71390.peg.3860, <br>fig|6666666.71390.peg.5223, <br>fig|6666666.71390.peg.5801, <br>fig|6666666.71390.peg.7329
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Stringent Response, (p)ppGpp metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.71390.peg.584
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	WhiB and WhiB-type regulatory proteins 	WhiB-type transcription regulator	fig|6666666.71390.peg.6154
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	WhiB and WhiB-type regulatory proteins 	WhiB-like transcription regulator	fig|6666666.71390.peg.3789
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	WhiB and WhiB-type regulatory proteins 	WhiB-family transcriptional regulator	fig|6666666.71390.peg.3725
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	WhiB and WhiB-type regulatory proteins 	Sporulation regulatory protein WhiD	fig|6666666.71390.peg.4148
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	WhiB and WhiB-type regulatory proteins 	Sporulation regulatory protein WhiB	fig|6666666.71390.peg.3853
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.71390.peg.2819, <br>fig|6666666.71390.peg.6306
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family	fig|6666666.71390.peg.4603, <br>fig|6666666.71390.peg.6322, <br>fig|6666666.71390.peg.6338, <br>fig|6666666.71390.peg.7035
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.71390.peg.5448
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.71390.peg.4743
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	Zinc uptake regulation protein ZUR	fig|6666666.71390.peg.272
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.71390.peg.6315
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.71390.peg.6283
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.71390.peg.880
Regulation and Cell signaling	Regulation and Cell signaling - no subcategory	Zinc regulated enzymes	Dihydroorotase (EC 3.5.2.3)	fig|6666666.71390.peg.688, <br>fig|6666666.71390.peg.7237
Regulation and Cell signaling	Programmed Cell Death and Toxin-antitoxin Systems	Possible new toxin-antitoxin system including DivIC	FIG004853: possible toxin to DivIC	fig|6666666.71390.peg.3269
Regulation and Cell signaling	Programmed Cell Death and Toxin-antitoxin Systems	Possible new toxin-antitoxin system including DivIC	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.71390.peg.723, <br>fig|6666666.71390.peg.2149, <br>fig|6666666.71390.peg.2249, <br>fig|6666666.71390.peg.2637, <br>fig|6666666.71390.peg.3209, <br>fig|6666666.71390.peg.3270, <br>fig|6666666.71390.peg.3757, <br>fig|6666666.71390.peg.4376, <br>fig|6666666.71390.peg.5255, <br>fig|6666666.71390.peg.5634, <br>fig|6666666.71390.peg.5974, <br>fig|6666666.71390.peg.6131, <br>fig|6666666.71390.peg.6134, <br>fig|6666666.71390.peg.6228
Regulation and Cell signaling	Programmed Cell Death and Toxin-antitoxin Systems	Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems	Prevent host death protein, Phd antitoxin	fig|6666666.71390.peg.4441
Regulation and Cell signaling	Programmed Cell Death and Toxin-antitoxin Systems	Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems	Death on curing protein, Doc toxin	fig|6666666.71390.peg.4442
Secondary Metabolism	Plant Alkaloids	Alkaloid biosynthesis from L-lysine	Oxalyl-CoA decarboxylase (EC 4.1.1.8)	fig|6666666.71390.peg.3200
Secondary Metabolism	Plant Hormones	Auxin biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.71390.peg.891
Secondary Metabolism	Plant Hormones	Auxin biosynthesis	Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)	fig|6666666.71390.peg.1848, <br>fig|6666666.71390.peg.1852
Secondary Metabolism	Plant Hormones	Auxin biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.71390.peg.890
Secondary Metabolism	Plant Hormones	Auxin biosynthesis	Monoamine oxidase (1.4.3.4)	fig|6666666.71390.peg.1329, <br>fig|6666666.71390.peg.2436, <br>fig|6666666.71390.peg.2972, <br>fig|6666666.71390.peg.7517
DNA Metabolism	DNA repair	Uracil-DNA glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.71390.peg.2294
DNA Metabolism	DNA repair	Uracil-DNA glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.71390.peg.2865
DNA Metabolism	DNA repair	Uracil-DNA glycosylase	Uracil-DNA glycosylase, family 5	fig|6666666.71390.peg.2874
DNA Metabolism	DNA repair	Uracil-DNA glycosylase	Uracil-DNA glycosylase, putative family 6	fig|6666666.71390.peg.6643
DNA Metabolism	DNA repair	DNA repair, UvrABC system	Excinuclease ABC subunit C	fig|6666666.71390.peg.726
DNA Metabolism	DNA repair	DNA repair, UvrABC system	Excinuclease ABC subunit A paralog of unknown function	fig|6666666.71390.peg.2889, <br>fig|6666666.71390.peg.6901
DNA Metabolism	DNA repair	DNA repair, UvrABC system	Excinuclease ABC subunit A	fig|6666666.71390.peg.1365
DNA Metabolism	DNA repair	DNA repair, UvrABC system	Excinuclease ABC subunit B	fig|6666666.71390.peg.1357
DNA Metabolism	DNA repair	DNA repair, bacterial photolyase	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	fig|6666666.71390.peg.2472
DNA Metabolism	DNA repair	DNA repair, bacterial DinG and relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.71390.peg.1990
DNA Metabolism	DNA repair	2-phosphoglycolate salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.71390.peg.1083, <br>fig|6666666.71390.peg.7716
DNA Metabolism	DNA repair	2-phosphoglycolate salvage	Putative phosphatase YfbT	fig|6666666.71390.peg.1136
DNA Metabolism	DNA repair	2-phosphoglycolate salvage	Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C	fig|6666666.71390.peg.5968, <br>fig|6666666.71390.peg.6667
DNA Metabolism	DNA repair	RecA and RecX	RecA protein	fig|6666666.71390.peg.2618
DNA Metabolism	DNA repair	RecA and RecX	Regulatory protein RecX	fig|6666666.71390.peg.2619
DNA Metabolism	DNA repair	DNA repair system including RecA, MutS and a hypothetical protein	RecA protein	fig|6666666.71390.peg.2618
DNA Metabolism	DNA repair	DNA repair system including RecA, MutS and a hypothetical protein	Regulatory protein RecX	fig|6666666.71390.peg.2619
DNA Metabolism	DNA repair	DNA repair, bacterial	DNA polymerase-like protein MT3142	fig|6666666.71390.peg.3404
DNA Metabolism	DNA repair	DNA repair, bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.71390.peg.2636
DNA Metabolism	DNA repair	DNA repair, bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.71390.peg.7153
DNA Metabolism	DNA repair	DNA repair, bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.71390.peg.828, <br>fig|6666666.71390.peg.5779
DNA Metabolism	DNA repair	DNA repair, bacterial	Single-stranded DNA-binding protein	fig|6666666.71390.peg.5484
DNA Metabolism	DNA repair	DNA repair, bacterial	Alkylated DNA repair protein AlkB	fig|6666666.71390.peg.3313
DNA Metabolism	DNA repair	DNA repair, bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.71390.peg.3111
DNA Metabolism	DNA repair	DNA repair, bacterial	DNA repair protein RadA	fig|6666666.71390.peg.6309
DNA Metabolism	DNA repair	DNA repair, bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.71390.peg.3110
DNA Metabolism	DNA repair	DNA repair, bacterial	DNA repair protein RecN	fig|6666666.71390.peg.1445
DNA Metabolism	DNA repair	DNA repair, bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.71390.peg.6305
DNA Metabolism	DNA repair	DNA repair, bacterial	Endonuclease IV (EC 3.1.21.2)	fig|6666666.71390.peg.4387
DNA Metabolism	DNA repair	DNA repair, bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.71390.peg.2865
DNA Metabolism	DNA repair	DNA repair, bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.71390.peg.1077, <br>fig|6666666.71390.peg.1975, <br>fig|6666666.71390.peg.1976, <br>fig|6666666.71390.peg.2348
DNA Metabolism	DNA repair	DNA repair, bacterial	RecA protein	fig|6666666.71390.peg.2618
DNA Metabolism	DNA repair	DNA repair, bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.71390.peg.4036, <br>fig|6666666.71390.peg.4886
DNA Metabolism	DNA repair	DNA repair, bacterial RecFOR pathway	ATP-dependent DNA helicase RecQ	fig|6666666.71390.peg.5124
DNA Metabolism	DNA repair	DNA repair, bacterial RecFOR pathway	Single-stranded DNA-binding protein	fig|6666666.71390.peg.5484
DNA Metabolism	DNA repair	DNA repair, bacterial RecFOR pathway	Recombination protein RecR	fig|6666666.71390.peg.6045
DNA Metabolism	DNA repair	DNA repair, bacterial RecFOR pathway	RecA protein	fig|6666666.71390.peg.2618
DNA Metabolism	DNA repair	DNA repair, bacterial RecFOR pathway	DNA recombination and repair protein RecO	fig|6666666.71390.peg.268
DNA Metabolism	DNA repair	DNA repair, bacterial RecFOR pathway	DNA recombination and repair protein RecF	fig|6666666.71390.peg.5433
DNA Metabolism	DNA repair	DNA repair, bacterial RecBCD pathway	Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	fig|6666666.71390.peg.4432
DNA Metabolism	DNA repair	DNA repair, bacterial RecBCD pathway	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	fig|6666666.71390.peg.4431
DNA Metabolism	DNA repair	DNA repair, bacterial RecBCD pathway	ATP-dependent DNA helicase SCO5183	fig|6666666.71390.peg.3741
DNA Metabolism	DNA repair	DNA repair, bacterial RecBCD pathway	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.71390.peg.4433
DNA Metabolism	DNA repair	DNA repair, bacterial RecBCD pathway	ATP-dependent DNA helicase SCO5184	fig|6666666.71390.peg.3740
DNA Metabolism	DNA repair	Nonhomologous End-Joining in Bacteria	ATP-dependent DNA ligase (EC 6.5.1.1) LigC	fig|6666666.71390.peg.6016, <br>fig|6666666.71390.peg.6017
DNA Metabolism	DNA repair	Nonhomologous End-Joining in Bacteria	Ku domain protein	fig|6666666.71390.peg.7621
DNA Metabolism	DNA repair	Nonhomologous End-Joining in Bacteria	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.71390.peg.7631
DNA Metabolism	DNA repair	DNA Repair Base Excision	ATP-dependent DNA ligase (EC 6.5.1.1) LigC	fig|6666666.71390.peg.6016, <br>fig|6666666.71390.peg.6017
DNA Metabolism	DNA repair	DNA Repair Base Excision	Uracil-DNA glycosylase, family 1	fig|6666666.71390.peg.2294
DNA Metabolism	DNA repair	DNA Repair Base Excision	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	fig|6666666.71390.peg.1438
DNA Metabolism	DNA repair	DNA Repair Base Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.71390.peg.2940
DNA Metabolism	DNA repair	DNA Repair Base Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.71390.peg.70, <br>fig|6666666.71390.peg.2314, <br>fig|6666666.71390.peg.3966, <br>fig|6666666.71390.peg.7665
DNA Metabolism	DNA repair	DNA Repair Base Excision	Ku domain protein	fig|6666666.71390.peg.7621
DNA Metabolism	DNA repair	DNA Repair Base Excision	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.71390.peg.7631
DNA Metabolism	DNA repair	DNA Repair Base Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.71390.peg.6167
DNA Metabolism	DNA repair	DNA Repair Base Excision	ATP-dependent DNA ligase (EC 6.5.1.1)	fig|6666666.71390.peg.3427, <br>fig|6666666.71390.peg.6018, <br>fig|6666666.71390.peg.7081
DNA Metabolism	DNA repair	DNA Repair Base Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.71390.peg.2246
DNA Metabolism	DNA repair	DNA Repair Base Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.71390.peg.1338
DNA Metabolism	DNA repair	DNA repair, bacterial UvrD and related helicases	ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	fig|6666666.71390.peg.3726
DNA Metabolism	DNA repair	DNA repair, bacterial UvrD and related helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.71390.peg.7677
DNA Metabolism	DNA Metabolism - no subcategory	Restriction-Modification System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.71390.peg.2152, <br>fig|6666666.71390.peg.2982
DNA Metabolism	DNA Metabolism - no subcategory	DNA ligases	ATP-dependent DNA ligase (EC 6.5.1.1) LigC	fig|6666666.71390.peg.6016, <br>fig|6666666.71390.peg.6017
DNA Metabolism	DNA Metabolism - no subcategory	DNA ligases	ATP-dependent DNA ligase (EC 6.5.1.1)	fig|6666666.71390.peg.3427, <br>fig|6666666.71390.peg.6018, <br>fig|6666666.71390.peg.7081
DNA Metabolism	DNA Metabolism - no subcategory	DNA ligases	Ku domain protein	fig|6666666.71390.peg.7621
DNA Metabolism	DNA Metabolism - no subcategory	DNA ligases	ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	fig|6666666.71390.peg.7631
DNA Metabolism	DNA Metabolism - no subcategory	YcfH	Putative deoxyribonuclease YcfH	fig|6666666.71390.peg.3303
DNA Metabolism	DNA Metabolism - no subcategory	DNA structural proteins, bacterial	Chromosome partition protein smc	fig|6666666.71390.peg.2318
DNA Metabolism	DNA Metabolism - no subcategory	DNA structural proteins, bacterial	DNA-binding protein HU	fig|6666666.71390.peg.2284, <br>fig|6666666.71390.peg.5784
DNA Metabolism	DNA replication	DNA topoisomerases, Type I, ATP-independent	Hypothetical protein PA2244 (similar to DNA topoisomerase IB, but possibly involved in glycosyl-transfer)	fig|6666666.71390.peg.3909
DNA Metabolism	DNA replication	DNA topoisomerases, Type I, ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.71390.peg.6218
DNA Metabolism	DNA replication	DNA replication strays	Probable 5@1-3@1 exonuclease Bsu YpcP	fig|6666666.71390.peg.1293
DNA Metabolism	DNA replication	DNA topoisomerases, Type II, ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.71390.peg.4518, <br>fig|6666666.71390.peg.5431
DNA Metabolism	DNA replication	DNA topoisomerases, Type II, ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.71390.peg.5373
DNA Metabolism	DNA replication	DNA topoisomerases, Type II, ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.71390.peg.6879
DNA Metabolism	DNA replication	DNA topoisomerases, Type II, ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.71390.peg.6878
DNA Metabolism	DNA recombination	RuvABC plus a hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.71390.peg.565
DNA Metabolism	DNA recombination	RuvABC plus a hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.71390.peg.570
DNA Metabolism	DNA recombination	RuvABC plus a hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.71390.peg.571
DNA Metabolism	DNA recombination	RuvABC plus a hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.71390.peg.572
DNA Metabolism	DNA uptake, competence	DNA processing cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.71390.peg.6044
DNA Metabolism	DNA uptake, competence	DNA processing cluster	Recombination protein RecR	fig|6666666.71390.peg.6045
DNA Metabolism	DNA uptake, competence	DNA processing cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.71390.peg.6038
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Cardiolipin synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.71390.peg.7495
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.71390.peg.279, <br>fig|6666666.71390.peg.1742, <br>fig|6666666.71390.peg.1756, <br>fig|6666666.71390.peg.1928, <br>fig|6666666.71390.peg.2196, <br>fig|6666666.71390.peg.2428, <br>fig|6666666.71390.peg.3181, <br>fig|6666666.71390.peg.3245, <br>fig|6666666.71390.peg.3374, <br>fig|6666666.71390.peg.3595, <br>fig|6666666.71390.peg.3628, <br>fig|6666666.71390.peg.3648, <br>fig|6666666.71390.peg.3667, <br>fig|6666666.71390.peg.3668, <br>fig|6666666.71390.peg.4711, <br>fig|6666666.71390.peg.5053, <br>fig|6666666.71390.peg.6104, <br>fig|6666666.71390.peg.6107, <br>fig|6666666.71390.peg.6384, <br>fig|6666666.71390.peg.6419, <br>fig|6666666.71390.peg.6513, <br>fig|6666666.71390.peg.6655, <br>fig|6666666.71390.peg.6891, <br>fig|6666666.71390.peg.6919, <br>fig|6666666.71390.peg.6983
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	fig|6666666.71390.peg.4856
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.71390.peg.437, <br>fig|6666666.71390.peg.3976
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.71390.peg.2288, <br>fig|6666666.71390.peg.4589
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.71390.peg.6120, <br>fig|6666666.71390.peg.6359
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Phosphatidylserine decarboxylase (EC 4.1.1.65)	fig|6666666.71390.peg.4855
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	fig|6666666.71390.peg.41
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.71390.peg.2105, <br>fig|6666666.71390.peg.2964, <br>fig|6666666.71390.peg.3443, <br>fig|6666666.71390.peg.3445, <br>fig|6666666.71390.peg.4056, <br>fig|6666666.71390.peg.4195, <br>fig|6666666.71390.peg.4710, <br>fig|6666666.71390.peg.4820, <br>fig|6666666.71390.peg.4829, <br>fig|6666666.71390.peg.5046, <br>fig|6666666.71390.peg.5099, <br>fig|6666666.71390.peg.5326, <br>fig|6666666.71390.peg.6050, <br>fig|6666666.71390.peg.6273, <br>fig|6666666.71390.peg.6362, <br>fig|6666666.71390.peg.6700, <br>fig|6666666.71390.peg.6713, <br>fig|6666666.71390.peg.6745, <br>fig|6666666.71390.peg.7480, <br>fig|6666666.71390.peg.7515, <br>fig|6666666.71390.peg.7540
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Aldehyde dehydrogenase B (EC 1.2.1.22)	fig|6666666.71390.peg.3953
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.71390.peg.40, <br>fig|6666666.71390.peg.1151, <br>fig|6666666.71390.peg.1840, <br>fig|6666666.71390.peg.2238, <br>fig|6666666.71390.peg.5816, <br>fig|6666666.71390.peg.5817
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.71390.peg.556, <br>fig|6666666.71390.peg.1706, <br>fig|6666666.71390.peg.2608
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.71390.peg.7495
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Dihydroxyacetone kinase family protein	fig|6666666.71390.peg.2297
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Acyl carrier protein	fig|6666666.71390.peg.443
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.71390.peg.2451
Fatty Acids, Lipids, and Isoprenoids	Phospholipids	Glycerolipid and Glycerophospholipid Metabolism in Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440
Fatty Acids, Lipids, and Isoprenoids	Triacylglycerols	Triacylglycerol metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.71390.peg.6367, <br>fig|6666666.71390.peg.6554
Fatty Acids, Lipids, and Isoprenoids	Triacylglycerols	Triacylglycerol metabolism	Triacylglycerol lipase precursor (EC 3.1.1.3)	fig|6666666.71390.peg.3243, <br>fig|6666666.71390.peg.3839, <br>fig|6666666.71390.peg.4074, <br>fig|6666666.71390.peg.6422, <br>fig|6666666.71390.peg.6520
Fatty Acids, Lipids, and Isoprenoids	Triacylglycerols	Triacylglycerol metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.71390.peg.2506, <br>fig|6666666.71390.peg.6367
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.71390.peg.1460, <br>fig|6666666.71390.peg.4250
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.71390.peg.329, <br>fig|6666666.71390.peg.548, <br>fig|6666666.71390.peg.625, <br>fig|6666666.71390.peg.766, <br>fig|6666666.71390.peg.798, <br>fig|6666666.71390.peg.938, <br>fig|6666666.71390.peg.1257, <br>fig|6666666.71390.peg.1344, <br>fig|6666666.71390.peg.1349, <br>fig|6666666.71390.peg.1398, <br>fig|6666666.71390.peg.1418, <br>fig|6666666.71390.peg.1804, <br>fig|6666666.71390.peg.2016, <br>fig|6666666.71390.peg.2054, <br>fig|6666666.71390.peg.2069, <br>fig|6666666.71390.peg.2103, <br>fig|6666666.71390.peg.2464, <br>fig|6666666.71390.peg.2552, <br>fig|6666666.71390.peg.2656, <br>fig|6666666.71390.peg.2657, <br>fig|6666666.71390.peg.3123, <br>fig|6666666.71390.peg.3192, <br>fig|6666666.71390.peg.3454, <br>fig|6666666.71390.peg.3474, <br>fig|6666666.71390.peg.3656, <br>fig|6666666.71390.peg.4360, <br>fig|6666666.71390.peg.4648, <br>fig|6666666.71390.peg.4929, <br>fig|6666666.71390.peg.5045, <br>fig|6666666.71390.peg.5118, <br>fig|6666666.71390.peg.5221, <br>fig|6666666.71390.peg.6066, <br>fig|6666666.71390.peg.6364, <br>fig|6666666.71390.peg.6377, <br>fig|6666666.71390.peg.6497, <br>fig|6666666.71390.peg.6526, <br>fig|6666666.71390.peg.6641, <br>fig|6666666.71390.peg.6648, <br>fig|6666666.71390.peg.6662, <br>fig|6666666.71390.peg.6737, <br>fig|6666666.71390.peg.6761, <br>fig|6666666.71390.peg.6765, <br>fig|6666666.71390.peg.6830, <br>fig|6666666.71390.peg.6843, <br>fig|6666666.71390.peg.6845, <br>fig|6666666.71390.peg.6889, <br>fig|6666666.71390.peg.6897, <br>fig|6666666.71390.peg.6956, <br>fig|6666666.71390.peg.7196, <br>fig|6666666.71390.peg.7246, <br>fig|6666666.71390.peg.7420, <br>fig|6666666.71390.peg.7483, <br>fig|6666666.71390.peg.7534, <br>fig|6666666.71390.peg.7537, <br>fig|6666666.71390.peg.7555, <br>fig|6666666.71390.peg.7578, <br>fig|6666666.71390.peg.7727
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.71390.peg.7523
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	fig|6666666.71390.peg.799
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.71390.peg.2145
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.71390.peg.3893
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.71390.peg.3893
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.71390.peg.441, <br>fig|6666666.71390.peg.442, <br>fig|6666666.71390.peg.4509, <br>fig|6666666.71390.peg.4555
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.71390.peg.7523
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Acyl carrier protein	fig|6666666.71390.peg.443
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Biotin carboxyl carrier protein	fig|6666666.71390.peg.3791
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.71390.peg.249, <br>fig|6666666.71390.peg.444, <br>fig|6666666.71390.peg.6779
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)	fig|6666666.71390.peg.372, <br>fig|6666666.71390.peg.1351, <br>fig|6666666.71390.peg.2759, <br>fig|6666666.71390.peg.3924, <br>fig|6666666.71390.peg.6841, <br>fig|6666666.71390.peg.6996
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty Acid Biosynthesis FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.71390.peg.3045, <br>fig|6666666.71390.peg.4030, <br>fig|6666666.71390.peg.4670, <br>fig|6666666.71390.peg.5100
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty acid metabolism cluster	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.7409
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty acid metabolism cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.71390.peg.251, <br>fig|6666666.71390.peg.252, <br>fig|6666666.71390.peg.500, <br>fig|6666666.71390.peg.575, <br>fig|6666666.71390.peg.576, <br>fig|6666666.71390.peg.814, <br>fig|6666666.71390.peg.1094, <br>fig|6666666.71390.peg.1146, <br>fig|6666666.71390.peg.1462, <br>fig|6666666.71390.peg.1603, <br>fig|6666666.71390.peg.1664, <br>fig|6666666.71390.peg.1670, <br>fig|6666666.71390.peg.1891, <br>fig|6666666.71390.peg.2008, <br>fig|6666666.71390.peg.2018, <br>fig|6666666.71390.peg.2131, <br>fig|6666666.71390.peg.2133, <br>fig|6666666.71390.peg.2244, <br>fig|6666666.71390.peg.2368, <br>fig|6666666.71390.peg.2555, <br>fig|6666666.71390.peg.2659, <br>fig|6666666.71390.peg.2868, <br>fig|6666666.71390.peg.2944, <br>fig|6666666.71390.peg.2953, <br>fig|6666666.71390.peg.3189, <br>fig|6666666.71390.peg.3199, <br>fig|6666666.71390.peg.3297, <br>fig|6666666.71390.peg.3442, <br>fig|6666666.71390.peg.3451, <br>fig|6666666.71390.peg.3464, <br>fig|6666666.71390.peg.3543, <br>fig|6666666.71390.peg.3872, <br>fig|6666666.71390.peg.4321, <br>fig|6666666.71390.peg.4537, <br>fig|6666666.71390.peg.4624, <br>fig|6666666.71390.peg.4635, <br>fig|6666666.71390.peg.4712, <br>fig|6666666.71390.peg.5097, <br>fig|6666666.71390.peg.5101, <br>fig|6666666.71390.peg.5197, <br>fig|6666666.71390.peg.5333, <br>fig|6666666.71390.peg.5334, <br>fig|6666666.71390.peg.5833, <br>fig|6666666.71390.peg.5837, <br>fig|6666666.71390.peg.6385, <br>fig|6666666.71390.peg.6424, <br>fig|6666666.71390.peg.6528, <br>fig|6666666.71390.peg.6609, <br>fig|6666666.71390.peg.6690, <br>fig|6666666.71390.peg.6691, <br>fig|6666666.71390.peg.6785, <br>fig|6666666.71390.peg.6837, <br>fig|6666666.71390.peg.6937, <br>fig|6666666.71390.peg.6967, <br>fig|6666666.71390.peg.6972, <br>fig|6666666.71390.peg.7082, <br>fig|6666666.71390.peg.7510, <br>fig|6666666.71390.peg.7550, <br>fig|6666666.71390.peg.7552, <br>fig|6666666.71390.peg.7681
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty acid metabolism cluster	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.71390.peg.23, <br>fig|6666666.71390.peg.142, <br>fig|6666666.71390.peg.786, <br>fig|6666666.71390.peg.1096, <br>fig|6666666.71390.peg.1408, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.1791, <br>fig|6666666.71390.peg.2029, <br>fig|6666666.71390.peg.2058, <br>fig|6666666.71390.peg.2207, <br>fig|6666666.71390.peg.3048, <br>fig|6666666.71390.peg.3055, <br>fig|6666666.71390.peg.3453, <br>fig|6666666.71390.peg.3455, <br>fig|6666666.71390.peg.3458, <br>fig|6666666.71390.peg.3461, <br>fig|6666666.71390.peg.3462, <br>fig|6666666.71390.peg.3463, <br>fig|6666666.71390.peg.3812, <br>fig|6666666.71390.peg.4151, <br>fig|6666666.71390.peg.4379, <br>fig|6666666.71390.peg.4823, <br>fig|6666666.71390.peg.5076, <br>fig|6666666.71390.peg.5102, <br>fig|6666666.71390.peg.5625, <br>fig|6666666.71390.peg.5695, <br>fig|6666666.71390.peg.5734, <br>fig|6666666.71390.peg.6551, <br>fig|6666666.71390.peg.6698, <br>fig|6666666.71390.peg.6853, <br>fig|6666666.71390.peg.6960, <br>fig|6666666.71390.peg.6961, <br>fig|6666666.71390.peg.7243, <br>fig|6666666.71390.peg.7526, <br>fig|6666666.71390.peg.7667, <br>fig|6666666.71390.peg.7680
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty acid metabolism cluster	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.2549, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3185, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Fatty acid metabolism cluster	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.71390.peg.239, <br>fig|6666666.71390.peg.240, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509, <br>fig|6666666.71390.peg.7409
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Acyl-CoA thioesterase II	TesB-like acyl-CoA thioesterase 4	fig|6666666.71390.peg.936
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Acyl-CoA thioesterase II	TesB-like acyl-CoA thioesterase 5	fig|6666666.71390.peg.1262, <br>fig|6666666.71390.peg.2458
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Acyl-CoA thioesterase II	TesB-like acyl-CoA thioesterase 3	fig|6666666.71390.peg.4754
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Acyl-CoA thioesterase II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.71390.peg.561, <br>fig|6666666.71390.peg.624, <br>fig|6666666.71390.peg.898, <br>fig|6666666.71390.peg.1362, <br>fig|6666666.71390.peg.1421, <br>fig|6666666.71390.peg.6143
Fatty Acids, Lipids, and Isoprenoids	Fatty acids	Acyl-CoA thioesterase II	TesB-like acyl-CoA thioesterase 2	fig|6666666.71390.peg.7046
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.7409
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.71390.peg.2540, <br>fig|6666666.71390.peg.6885, <br>fig|6666666.71390.peg.6896
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	Polyhydroxyalkanoic acid synthase	fig|6666666.71390.peg.1432, <br>fig|6666666.71390.peg.6386
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.3808, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	fig|6666666.71390.peg.4110, <br>fig|6666666.71390.peg.6371
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	Acetoacetyl-CoA synthetase (EC 6.2.1.16)	fig|6666666.71390.peg.2944, <br>fig|6666666.71390.peg.6372, <br>fig|6666666.71390.peg.7510
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.71390.peg.23, <br>fig|6666666.71390.peg.142, <br>fig|6666666.71390.peg.786, <br>fig|6666666.71390.peg.1096, <br>fig|6666666.71390.peg.1408, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.1791, <br>fig|6666666.71390.peg.2029, <br>fig|6666666.71390.peg.2058, <br>fig|6666666.71390.peg.2207, <br>fig|6666666.71390.peg.3048, <br>fig|6666666.71390.peg.3055, <br>fig|6666666.71390.peg.3453, <br>fig|6666666.71390.peg.3455, <br>fig|6666666.71390.peg.3458, <br>fig|6666666.71390.peg.3461, <br>fig|6666666.71390.peg.3462, <br>fig|6666666.71390.peg.3463, <br>fig|6666666.71390.peg.3812, <br>fig|6666666.71390.peg.4151, <br>fig|6666666.71390.peg.4379, <br>fig|6666666.71390.peg.4823, <br>fig|6666666.71390.peg.5076, <br>fig|6666666.71390.peg.5102, <br>fig|6666666.71390.peg.5625, <br>fig|6666666.71390.peg.5695, <br>fig|6666666.71390.peg.5734, <br>fig|6666666.71390.peg.6551, <br>fig|6666666.71390.peg.6698, <br>fig|6666666.71390.peg.6853, <br>fig|6666666.71390.peg.6960, <br>fig|6666666.71390.peg.6961, <br>fig|6666666.71390.peg.7243, <br>fig|6666666.71390.peg.7526, <br>fig|6666666.71390.peg.7667, <br>fig|6666666.71390.peg.7680
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.2549, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3185, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.71390.peg.239, <br>fig|6666666.71390.peg.240, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509, <br>fig|6666666.71390.peg.7409
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Polyhydroxybutyrate metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Cholesterol catabolic operon in Mycobacteria	Enoyl coenzyme A hydratase IgrE	fig|6666666.71390.peg.5135
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Cholesterol catabolic operon in Mycobacteria	Lipid carrier protein IgrF	fig|6666666.71390.peg.5134
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Cholesterol catabolic operon in Mycobacteria	Acyl-CoA dehydrogenase IgrC	fig|6666666.71390.peg.5137
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Cholesterol catabolic operon in Mycobacteria	Putative cytochrome P450 IgrA	fig|6666666.71390.peg.5139
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Cholesterol catabolic operon in Mycobacteria	Acyl-CoA dehydrogenase IgrB	fig|6666666.71390.peg.5138
Fatty Acids, Lipids, and Isoprenoids	Fatty Acids, Lipids, and Isoprenoids - no subcategory	Cholesterol catabolic operon in Mycobacteria	Conserved protein IgrD	fig|6666666.71390.peg.5136
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoinds for Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.71390.peg.3644, <br>fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoinds for Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.71390.peg.4600, <br>fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoinds for Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.71390.peg.1159, <br>fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoinds for Quinones	(2E,6Z)-farnesyl diphosphate synthase (EC 2.5.1.68)	fig|6666666.71390.peg.3147
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoinds for Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.71390.peg.4600, <br>fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.71390.peg.3108
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.71390.peg.3298
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.71390.peg.6314
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.3808, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.71390.peg.2735
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.71390.peg.1820, <br>fig|6666666.71390.peg.2478
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.71390.peg.2480
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10)	fig|6666666.71390.peg.2107
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.71390.peg.6313
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Polyprenyl Diphosphate Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.71390.peg.3644, <br>fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Polyprenyl Diphosphate Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.71390.peg.1159, <br>fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Polyprenyl Diphosphate Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.71390.peg.6247
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Nonmevalonate Branch of Isoprenoid Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.71390.peg.1820, <br>fig|6666666.71390.peg.2478
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Nonmevalonate Branch of Isoprenoid Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.71390.peg.3108
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Nonmevalonate Branch of Isoprenoid Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.71390.peg.2480
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Nonmevalonate Branch of Isoprenoid Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.71390.peg.3298
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Nonmevalonate Branch of Isoprenoid Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.71390.peg.6314
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Nonmevalonate Branch of Isoprenoid Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.71390.peg.6313
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Nonmevalonate Branch of Isoprenoid Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.71390.peg.2735
Fatty Acids, Lipids, and Isoprenoids	Isoprenoids	Isoprenoid Biosynthesis: Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.71390.peg.6247
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Cyanate hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.71390.peg.2819, <br>fig|6666666.71390.peg.6306
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Cyanate hydrolysis	Cyn operon transcriptional activator	fig|6666666.71390.peg.332
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Cyanate hydrolysis	Cyanate hydratase (EC 4.2.1.104)	fig|6666666.71390.peg.4430
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Allantoin Utilization	Ureidoglycolate dehydrogenase (EC 1.1.1.154)	fig|6666666.71390.peg.4524
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Allantoin Utilization	Allantoinase (EC 3.5.2.5)	fig|6666666.71390.peg.992
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Allantoin Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.71390.peg.988, <br>fig|6666666.71390.peg.2086, <br>fig|6666666.71390.peg.2087, <br>fig|6666666.71390.peg.4902
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Allantoin Utilization	Glyoxylate carboligase (EC 4.1.1.47)	fig|6666666.71390.peg.989
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Allantoin Utilization	Allantoicase (EC 3.5.3.4)	fig|6666666.71390.peg.991
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Allantoin Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrosative stress	Nitrite-sensitive transcriptional repressor NsrR	fig|6666666.71390.peg.4421
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Amidase clustered with urea and nitrile hydratase functions	Amidase clustered with urea ABC transporter and nitrile hydratase functions	fig|6666666.71390.peg.6545
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.71390.peg.3010
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Nitrate/nitrite transporter	fig|6666666.71390.peg.3011, <br>fig|6666666.71390.peg.3176, <br>fig|6666666.71390.peg.6808
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Assimilatory nitrate reductase large subunit (EC:1.7.99.4)	fig|6666666.71390.peg.1198
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.71390.peg.3007
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.71390.peg.3009
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.71390.peg.3008
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	fig|6666666.71390.peg.6803
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Nitrate and nitrite ammonification	Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	fig|6666666.71390.peg.6804
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Nitrogen regulatory protein P-II	fig|6666666.71390.peg.2321
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.71390.peg.1104
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Ammonium transporter	fig|6666666.71390.peg.2320, <br>fig|6666666.71390.peg.6083, <br>fig|6666666.71390.peg.7159
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.71390.peg.413, <br>fig|6666666.71390.peg.895, <br>fig|6666666.71390.peg.5768
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.71390.peg.2322
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.71390.peg.356, <br>fig|6666666.71390.peg.416, <br>fig|6666666.71390.peg.1103, <br>fig|6666666.71390.peg.1109, <br>fig|6666666.71390.peg.1808, <br>fig|6666666.71390.peg.5593, <br>fig|6666666.71390.peg.6082
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.71390.peg.896, <br>fig|6666666.71390.peg.5769
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.71390.peg.90
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Glutamate synthase [NADPH] putative GlxC chain (EC 1.4.1.13)	fig|6666666.71390.peg.414
Nitrogen Metabolism	Nitrogen Metabolism - no subcategory	Ammonia assimilation	Glutamine amidotransferase protein GlxB (EC 2.4.2.-)	fig|6666666.71390.peg.415
Nitrogen Metabolism	Denitrification	Denitrifying reductase gene clusters	Respiratory nitrate reductase alpha chain (EC 1.7.99.4)	fig|6666666.71390.peg.3010
Nitrogen Metabolism	Denitrification	Denitrifying reductase gene clusters	Respiratory nitrate reductase gamma chain (EC 1.7.99.4)	fig|6666666.71390.peg.3007
Nitrogen Metabolism	Denitrification	Denitrifying reductase gene clusters	Respiratory nitrate reductase delta chain (EC 1.7.99.4)	fig|6666666.71390.peg.3008
Nitrogen Metabolism	Denitrification	Denitrifying reductase gene clusters	Respiratory nitrate reductase beta chain (EC 1.7.99.4)	fig|6666666.71390.peg.3009
Dormancy and Sporulation	Dormancy and Sporulation - no subcategory	Persister Cells	Cell division inhibitor	fig|6666666.71390.peg.734, <br>fig|6666666.71390.peg.1114
Dormancy and Sporulation	Dormancy and Sporulation - no subcategory	Sporulation-associated proteins with broader functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.71390.peg.3293
Respiration	Electron accepting reactions	Ubiquinone Menaquinone-cytochrome c reductase complexes	ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit	fig|6666666.71390.peg.1139
Respiration	Electron accepting reactions	Ubiquinone Menaquinone-cytochrome c reductase complexes	Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)	fig|6666666.71390.peg.1138
Respiration	Electron accepting reactions	Ubiquinone Menaquinone-cytochrome c reductase complexes	Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)	fig|6666666.71390.peg.980, <br>fig|6666666.71390.peg.1137
Respiration	Electron accepting reactions	Terminal cytochrome d ubiquinol oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.71390.peg.904
Respiration	Electron accepting reactions	Terminal cytochrome d ubiquinol oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.71390.peg.903
Respiration	Electron accepting reactions	Terminal cytochrome d ubiquinol oxidases	Transport ATP-binding protein CydD	fig|6666666.71390.peg.902
Respiration	Electron accepting reactions	Terminal cytochrome d ubiquinol oxidases	Transport ATP-binding protein CydC	fig|6666666.71390.peg.901
Respiration	Electron accepting reactions	Terminal cytochrome C oxidases	Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	fig|6666666.71390.peg.1140, <br>fig|6666666.71390.peg.2125
Respiration	Electron accepting reactions	Terminal cytochrome C oxidases	Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	fig|6666666.71390.peg.2199, <br>fig|6666666.71390.peg.3930
Respiration	Electron accepting reactions	Terminal cytochrome C oxidases	Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	fig|6666666.71390.peg.1131
Respiration	Electron accepting reactions	Anaerobic respiratory reductases	Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)	fig|6666666.71390.peg.171, <br>fig|6666666.71390.peg.379, <br>fig|6666666.71390.peg.1681, <br>fig|6666666.71390.peg.5168, <br>fig|6666666.71390.peg.5992, <br>fig|6666666.71390.peg.7217
Respiration	Electron accepting reactions	Anaerobic respiratory reductases	Coenzyme F420-dependent oxidoreductase	fig|6666666.71390.peg.5107, <br>fig|6666666.71390.peg.5772
Respiration	Electron accepting reactions	Anaerobic respiratory reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.71390.peg.1416, <br>fig|6666666.71390.peg.3782, <br>fig|6666666.71390.peg.6892
Respiration	Electron accepting reactions	Anaerobic respiratory reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.71390.peg.171, <br>fig|6666666.71390.peg.379, <br>fig|6666666.71390.peg.952, <br>fig|6666666.71390.peg.1681, <br>fig|6666666.71390.peg.3823, <br>fig|6666666.71390.peg.3970, <br>fig|6666666.71390.peg.5168, <br>fig|6666666.71390.peg.5992
Respiration	Electron accepting reactions	Anaerobic respiratory reductases	Ferredoxin reductase	fig|6666666.71390.peg.1763, <br>fig|6666666.71390.peg.3510, <br>fig|6666666.71390.peg.4081, <br>fig|6666666.71390.peg.4291, <br>fig|6666666.71390.peg.4355, <br>fig|6666666.71390.peg.5592
Respiration	Electron accepting reactions	Anaerobic respiratory reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.71390.peg.3279, <br>fig|6666666.71390.peg.3280, <br>fig|6666666.71390.peg.3289, <br>fig|6666666.71390.peg.6628, <br>fig|6666666.71390.peg.6629, <br>fig|6666666.71390.peg.6630
Respiration	Electron accepting reactions	Anaerobic respiratory reductases	Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)	fig|6666666.71390.peg.677
Respiration	Electron accepting reactions	Terminal cytochrome oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.71390.peg.904
Respiration	Electron accepting reactions	Terminal cytochrome oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.71390.peg.903
Respiration	Electron accepting reactions	Terminal cytochrome oxidases	Transport ATP-binding protein CydD	fig|6666666.71390.peg.902
Respiration	Electron accepting reactions	Terminal cytochrome oxidases	Transport ATP-binding protein CydC	fig|6666666.71390.peg.901
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)	fig|6666666.71390.peg.3623, <br>fig|6666666.71390.peg.4950
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)	fig|6666666.71390.peg.3624, <br>fig|6666666.71390.peg.4949
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)	fig|6666666.71390.peg.3622, <br>fig|6666666.71390.peg.4951
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)	fig|6666666.71390.peg.3626, <br>fig|6666666.71390.peg.4947
Respiration	Electron donating reactions	Respiratory Complex I	NADH-quinone oxidoreductase chain F 2 (EC 1.6.99.5)	fig|6666666.71390.peg.2091
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)	fig|6666666.71390.peg.3620, <br>fig|6666666.71390.peg.4953
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)	fig|6666666.71390.peg.3617, <br>fig|6666666.71390.peg.4956
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)	fig|6666666.71390.peg.3613, <br>fig|6666666.71390.peg.4959
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)	fig|6666666.71390.peg.3621, <br>fig|6666666.71390.peg.4952
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)	fig|6666666.71390.peg.3625, <br>fig|6666666.71390.peg.4948
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)	fig|6666666.71390.peg.3618, <br>fig|6666666.71390.peg.4955
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)	fig|6666666.71390.peg.3619, <br>fig|6666666.71390.peg.4954
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)	fig|6666666.71390.peg.3614, <br>fig|6666666.71390.peg.4958
Respiration	Electron donating reactions	Respiratory Complex I	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)	fig|6666666.71390.peg.3612, <br>fig|6666666.71390.peg.4960
Respiration	Electron donating reactions	Respiratory Complex I	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)	fig|6666666.71390.peg.3615, <br>fig|6666666.71390.peg.4957
Respiration	Electron donating reactions	Respiratory dehydrogenases 1	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.71390.peg.2957
Respiration	Electron donating reactions	Respiratory dehydrogenases 1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.71390.peg.823, <br>fig|6666666.71390.peg.1733, <br>fig|6666666.71390.peg.1920, <br>fig|6666666.71390.peg.3306, <br>fig|6666666.71390.peg.4458, <br>fig|6666666.71390.peg.5302, <br>fig|6666666.71390.peg.5331
Respiration	Electron donating reactions	Respiratory dehydrogenases 1	Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site	fig|6666666.71390.peg.5218, <br>fig|6666666.71390.peg.6712, <br>fig|6666666.71390.peg.6864
Respiration	Electron donating reactions	Respiratory dehydrogenases 1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.71390.peg.437, <br>fig|6666666.71390.peg.3976
Respiration	Electron donating reactions	Respiratory dehydrogenases 1	D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	fig|6666666.71390.peg.244, <br>fig|6666666.71390.peg.2724, <br>fig|6666666.71390.peg.6032
Respiration	Electron donating reactions	Respiratory dehydrogenases 1	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.71390.peg.6115
Respiration	Electron donating reactions	NiFe hydrogenase maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.71390.peg.4969
Respiration	Electron donating reactions	NiFe hydrogenase maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.71390.peg.4989
Respiration	Electron donating reactions	NiFe hydrogenase maturation	[NiFe] hydrogenase metallocenter assembly protein HypC	fig|6666666.71390.peg.4964, <br>fig|6666666.71390.peg.4968
Respiration	Electron donating reactions	NiFe hydrogenase maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.71390.peg.4990
Respiration	Electron donating reactions	NiFe hydrogenase maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.71390.peg.4963
Respiration	Electron donating reactions	NiFe hydrogenase maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.71390.peg.4965
Respiration	Electron donating reactions	Hydrogenases	Uptake hydrogenase large subunit (EC 1.12.99.6)	fig|6666666.71390.peg.4975
Respiration	Electron donating reactions	Hydrogenases	Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	fig|6666666.71390.peg.4976
Respiration	Electron donating reactions	Succinate dehydrogenase	fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase	fig|6666666.71390.peg.1702
Respiration	Electron donating reactions	Succinate dehydrogenase	Succinate dehydrogenase hydrophobic membrane anchor protein	fig|6666666.71390.peg.4008
Respiration	Electron donating reactions	Succinate dehydrogenase	Succinate dehydrogenase cytochrome b-556 subunit	fig|6666666.71390.peg.4007
Respiration	Electron donating reactions	Succinate dehydrogenase	putative succinate dehydrogenase [membrane anchor subunit] (succinic dehydrogenase)	fig|6666666.71390.peg.6791
Respiration	Electron donating reactions	Succinate dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.71390.peg.3991, <br>fig|6666666.71390.peg.4009, <br>fig|6666666.71390.peg.6790, <br>fig|6666666.71390.peg.7548, <br>fig|6666666.71390.peg.7683
Respiration	Electron donating reactions	Succinate dehydrogenase	Fumarate reductase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.71390.peg.6709
Respiration	Electron donating reactions	Succinate dehydrogenase	Fumarate reductase subunit C	fig|6666666.71390.peg.7546
Respiration	Electron donating reactions	Succinate dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.71390.peg.4010, <br>fig|6666666.71390.peg.6789, <br>fig|6666666.71390.peg.7547
Respiration	Electron donating reactions	Succinate dehydrogenase	Fumarate reductase subunit D	fig|6666666.71390.peg.7545
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)	fig|6666666.71390.peg.3623, <br>fig|6666666.71390.peg.4950
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)	fig|6666666.71390.peg.3624, <br>fig|6666666.71390.peg.4949
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)	fig|6666666.71390.peg.3622, <br>fig|6666666.71390.peg.4951
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)	fig|6666666.71390.peg.3626, <br>fig|6666666.71390.peg.4947
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)	fig|6666666.71390.peg.3620, <br>fig|6666666.71390.peg.4953
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)	fig|6666666.71390.peg.3617, <br>fig|6666666.71390.peg.4956
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)	fig|6666666.71390.peg.3613, <br>fig|6666666.71390.peg.4959
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)	fig|6666666.71390.peg.3621, <br>fig|6666666.71390.peg.4952
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)	fig|6666666.71390.peg.3625, <br>fig|6666666.71390.peg.4948
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)	fig|6666666.71390.peg.3618, <br>fig|6666666.71390.peg.4955
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)	fig|6666666.71390.peg.3619, <br>fig|6666666.71390.peg.4954
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)	fig|6666666.71390.peg.3614, <br>fig|6666666.71390.peg.4958
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)	fig|6666666.71390.peg.3612, <br>fig|6666666.71390.peg.4960
Respiration	Electron donating reactions	NADH ubiquinone oxidoreductase	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)	fig|6666666.71390.peg.3615, <br>fig|6666666.71390.peg.4957
Respiration	Respiration - no subcategory	Quinone oxidoreductase family	Putative oxidoreductase SMc00968	fig|6666666.71390.peg.110
Respiration	Respiration - no subcategory	Quinone oxidoreductase family	Quinone oxidoreductase (EC 1.6.5.5)	fig|6666666.71390.peg.760, <br>fig|6666666.71390.peg.1593, <br>fig|6666666.71390.peg.1915, <br>fig|6666666.71390.peg.1953, <br>fig|6666666.71390.peg.2076, <br>fig|6666666.71390.peg.5240, <br>fig|6666666.71390.peg.5543, <br>fig|6666666.71390.peg.5875, <br>fig|6666666.71390.peg.6405, <br>fig|6666666.71390.peg.7326
Respiration	Respiration - no subcategory	Quinone oxidoreductase family	Putative oxidoreductase YncB	fig|6666666.71390.peg.6529, <br>fig|6666666.71390.peg.6836
Respiration	Respiration - no subcategory	Biogenesis of cytochrome c oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.71390.peg.5690
Respiration	Respiration - no subcategory	Biogenesis of cytochrome c oxidases	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	fig|6666666.71390.peg.758
Respiration	Respiration - no subcategory	Biogenesis of cytochrome c oxidases	Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	fig|6666666.71390.peg.1081
Respiration	Respiration - no subcategory	Formate hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.71390.peg.89
Respiration	Respiration - no subcategory	Formate hydrogenase	Formate hydrogenlyase subunit 7	fig|6666666.71390.peg.5775
Respiration	Respiration - no subcategory	Formate hydrogenase	Formate dehydrogenase O putative subunit	fig|6666666.71390.peg.5160
Respiration	Respiration - no subcategory	Formate hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.71390.peg.5161
Respiration	Respiration - no subcategory	Formate hydrogenase	Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	fig|6666666.71390.peg.5162, <br>fig|6666666.71390.peg.5163, <br>fig|6666666.71390.peg.5164
Respiration	Respiration - no subcategory	Formate hydrogenase	Putative formate dehydrogenase oxidoreductase protein	fig|6666666.71390.peg.3525, <br>fig|6666666.71390.peg.7598
Respiration	Respiration - no subcategory	Formate hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.71390.peg.1835
Respiration	Respiration - no subcategory	Biogenesis of c-type cytochromes	Cytochrome c-type biogenesis protein CcsA/ResC	fig|6666666.71390.peg.4686
Respiration	Respiration - no subcategory	Biogenesis of c-type cytochromes	Thiol:disulfide oxidoreductase related to ResA	fig|6666666.71390.peg.1493, <br>fig|6666666.71390.peg.4689
Respiration	Respiration - no subcategory	Biogenesis of c-type cytochromes	Cytochrome c-type biogenesis protein CcdA (DsbD analog)	fig|6666666.71390.peg.1490, <br>fig|6666666.71390.peg.4688
Respiration	Respiration - no subcategory	Biogenesis of c-type cytochromes	Ccs1/ResB-related putative cytochrome C-type biogenesis protein	fig|6666666.71390.peg.1489, <br>fig|6666666.71390.peg.4687
Respiration	Respiration - no subcategory	Soluble cytochromes and functionally related electron carriers	Ferredoxin, 2Fe-2S	fig|6666666.71390.peg.4289, <br>fig|6666666.71390.peg.4292
Respiration	Respiration - no subcategory	Soluble cytochromes and functionally related electron carriers	Ferredoxin	fig|6666666.71390.peg.2046, <br>fig|6666666.71390.peg.3488, <br>fig|6666666.71390.peg.5051, <br>fig|6666666.71390.peg.5094, <br>fig|6666666.71390.peg.5591, <br>fig|6666666.71390.peg.5960, <br>fig|6666666.71390.peg.7117, <br>fig|6666666.71390.peg.7467, <br>fig|6666666.71390.peg.7682
Stress Response	Osmotic stress	Osmoregulation	Aquaporin Z	fig|6666666.71390.peg.5765
Stress Response	Osmotic stress	Osmoregulation	Glycerol uptake facilitator protein	fig|6666666.71390.peg.3550
Stress Response	Osmotic stress	Ectoine biosynthesis and regulation	Diaminobutyrate-pyruvate aminotransferase (EC 2.6.1.46)	fig|6666666.71390.peg.1273
Stress Response	Osmotic stress	Ectoine biosynthesis and regulation	Ectoine hydroxylase (EC 1.17.-.-)	fig|6666666.71390.peg.1275
Stress Response	Osmotic stress	Ectoine biosynthesis and regulation	L-ectoine synthase (EC 4.2.1.-)	fig|6666666.71390.peg.1274
Stress Response	Osmotic stress	Ectoine biosynthesis and regulation	L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-)	fig|6666666.71390.peg.1272
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Sarcosine oxidase gamma subunit (EC 1.5.3.1)	fig|6666666.71390.peg.3523
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Sarcosine oxidase alpha subunit (EC 1.5.3.1)	fig|6666666.71390.peg.3522, <br>fig|6666666.71390.peg.6357
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Sarcosine oxidase beta subunit (EC 1.5.3.1)	fig|6666666.71390.peg.417, <br>fig|6666666.71390.peg.3520
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	High-affinity choline uptake protein BetT	fig|6666666.71390.peg.3512
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Choline-sulfatase (EC 3.1.6.6)	fig|6666666.71390.peg.312
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.71390.peg.3507, <br>fig|6666666.71390.peg.4015, <br>fig|6666666.71390.peg.4290
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Glycine betaine ABC transport system permease protein	fig|6666666.71390.peg.5204, <br>fig|6666666.71390.peg.5978
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.71390.peg.5206, <br>fig|6666666.71390.peg.5976
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Glycine betaine transporter OpuD	fig|6666666.71390.peg.3826, <br>fig|6666666.71390.peg.6054
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Sarcosine oxidase delta subunit (EC 1.5.3.1)	fig|6666666.71390.peg.3521
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.71390.peg.5203, <br>fig|6666666.71390.peg.5975
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	Choline dehydrogenase (EC 1.1.99.1)	fig|6666666.71390.peg.85, <br>fig|6666666.71390.peg.1946, <br>fig|6666666.71390.peg.2839, <br>fig|6666666.71390.peg.3504, <br>fig|6666666.71390.peg.4345, <br>fig|6666666.71390.peg.5328, <br>fig|6666666.71390.peg.6999
Stress Response	Osmotic stress	Choline and Betaine Uptake and Betaine Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)	fig|6666666.71390.peg.5205, <br>fig|6666666.71390.peg.5977
Stress Response	Oxidative stress	Glutathione: Non-redox reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.71390.peg.3277, <br>fig|6666666.71390.peg.6633
Stress Response	Oxidative stress	Glutathione: Non-redox reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.71390.peg.600
Stress Response	Oxidative stress	Redox-dependent regulation of nucleus processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.71390.peg.1991
Stress Response	Oxidative stress	Redox-dependent regulation of nucleus processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.71390.peg.140, <br>fig|6666666.71390.peg.5735
Stress Response	Oxidative stress	Redox-dependent regulation of nucleus processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.71390.peg.139, <br>fig|6666666.71390.peg.3039
Stress Response	Oxidative stress	Redox-dependent regulation of nucleus processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.71390.peg.739, <br>fig|6666666.71390.peg.740, <br>fig|6666666.71390.peg.4943
Stress Response	Oxidative stress	Glutathione: Redox cycle	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.71390.peg.3399, <br>fig|6666666.71390.peg.5891
Stress Response	Oxidative stress	Glutaredoxins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.71390.peg.4420
Stress Response	Oxidative stress	Glutaredoxins	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	fig|6666666.71390.peg.3399, <br>fig|6666666.71390.peg.5891
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	NADPH-dependent mycothiol reductase Mtr	fig|6666666.71390.peg.2505
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	fig|6666666.71390.peg.426, <br>fig|6666666.71390.peg.3527, <br>fig|6666666.71390.peg.6743
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR	fig|6666666.71390.peg.425, <br>fig|6666666.71390.peg.3526
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	S-nitrosomycothiol reductase MscR	fig|6666666.71390.peg.426, <br>fig|6666666.71390.peg.3527, <br>fig|6666666.71390.peg.6743
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	Mycothiol S-conjugate amidase Mca	fig|6666666.71390.peg.3153
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	fig|6666666.71390.peg.1231
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	fig|6666666.71390.peg.4792
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	Uncharacterized protein Rv0487/MT0505 clustered with mycothiol biosynthesis gene	fig|6666666.71390.peg.4791
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	fig|6666666.71390.peg.7321
Stress Response	Oxidative stress	Glutathione analogs: mycothiol	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	fig|6666666.71390.peg.2999
Stress Response	Oxidative stress	Oxidative stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.71390.peg.913, <br>fig|6666666.71390.peg.5763
Stress Response	Oxidative stress	Oxidative stress	Redox-sensitive transcriptional activator SoxR	fig|6666666.71390.peg.3312
Stress Response	Oxidative stress	Oxidative stress	Alkyl hydroperoxide reductase subunit C-like protein	fig|6666666.71390.peg.449, <br>fig|6666666.71390.peg.886, <br>fig|6666666.71390.peg.1485, <br>fig|6666666.71390.peg.6504
Stress Response	Oxidative stress	Oxidative stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.71390.peg.1619, <br>fig|6666666.71390.peg.4881
Stress Response	Oxidative stress	Oxidative stress	Hydrogen peroxide-inducible genes activator	fig|6666666.71390.peg.7599
Stress Response	Oxidative stress	Oxidative stress	Nitrite-sensitive transcriptional repressor NsrR	fig|6666666.71390.peg.4421
Stress Response	Oxidative stress	Oxidative stress	Catalase (EC 1.11.1.6)	fig|6666666.71390.peg.705, <br>fig|6666666.71390.peg.974, <br>fig|6666666.71390.peg.3322, <br>fig|6666666.71390.peg.5850, <br>fig|6666666.71390.peg.6645, <br>fig|6666666.71390.peg.7231
Stress Response	Oxidative stress	Oxidative stress	Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)	fig|6666666.71390.peg.6235
Stress Response	Oxidative stress	Oxidative stress	Organic hydroperoxide resistance protein	fig|6666666.71390.peg.6822
Stress Response	Oxidative stress	Oxidative stress	Organic hydroperoxide resistance transcriptional regulator	fig|6666666.71390.peg.6823, <br>fig|6666666.71390.peg.7005
Stress Response	Oxidative stress	Oxidative stress	Non-specific DNA-binding protein Dps	fig|6666666.71390.peg.913, <br>fig|6666666.71390.peg.5763
Stress Response	Oxidative stress	Oxidative stress	Zinc uptake regulation protein ZUR	fig|6666666.71390.peg.272
Stress Response	Oxidative stress	Oxidative stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.71390.peg.913, <br>fig|6666666.71390.peg.5763
Stress Response	Oxidative stress	Oxidative stress	Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)	fig|6666666.71390.peg.5795
Stress Response	Oxidative stress	Oxidative stress	Peroxidase (EC 1.11.1.7)	fig|6666666.71390.peg.974, <br>fig|6666666.71390.peg.3226, <br>fig|6666666.71390.peg.5850, <br>fig|6666666.71390.peg.7231
Stress Response	Oxidative stress	Oxidative stress	Transcriptional regulator, FUR family	fig|6666666.71390.peg.975, <br>fig|6666666.71390.peg.3323, <br>fig|6666666.71390.peg.5851, <br>fig|6666666.71390.peg.6092, <br>fig|6666666.71390.peg.7232
Stress Response	Oxidative stress	Protection from Reactive Oxygen Species	Peroxidase (EC 1.11.1.7)	fig|6666666.71390.peg.974, <br>fig|6666666.71390.peg.3226, <br>fig|6666666.71390.peg.5850, <br>fig|6666666.71390.peg.7231
Stress Response	Oxidative stress	Protection from Reactive Oxygen Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.71390.peg.1619, <br>fig|6666666.71390.peg.4881
Stress Response	Oxidative stress	Protection from Reactive Oxygen Species	Catalase (EC 1.11.1.6)	fig|6666666.71390.peg.705, <br>fig|6666666.71390.peg.974, <br>fig|6666666.71390.peg.3322, <br>fig|6666666.71390.peg.5850, <br>fig|6666666.71390.peg.6645, <br>fig|6666666.71390.peg.7231
Stress Response	Oxidative stress	Rubrerythrin	Rubredoxin	fig|6666666.71390.peg.3842, <br>fig|6666666.71390.peg.3843
Stress Response	Oxidative stress	Rubrerythrin	Alkyl hydroperoxide reductase subunit C-like protein	fig|6666666.71390.peg.449, <br>fig|6666666.71390.peg.886, <br>fig|6666666.71390.peg.1485, <br>fig|6666666.71390.peg.6504
Stress Response	Oxidative stress	Cluster containing Glutathione synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.71390.peg.258
Stress Response	Oxidative stress	Cluster containing Glutathione synthetase	Putative Holliday junction resolvase YggF	fig|6666666.71390.peg.657
Stress Response	Cold shock	Cold shock, CspA family of proteins	Cold shock protein CspA	fig|6666666.71390.peg.6216, <br>fig|6666666.71390.peg.7022
Stress Response	Cold shock	Cold shock, CspA family of proteins	Cold shock protein CspC	fig|6666666.71390.peg.7452
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.71390.peg.234
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	HspR, transcriptional repressor of DnaK operon	fig|6666666.71390.peg.1005, <br>fig|6666666.71390.peg.4694, <br>fig|6666666.71390.peg.7215
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Heat-inducible transcription repressor HrcA	fig|6666666.71390.peg.256
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Chaperone protein DnaK	fig|6666666.71390.peg.7212
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Chaperone protein DnaJ	fig|6666666.71390.peg.257, <br>fig|6666666.71390.peg.7214
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.71390.peg.258
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	tmRNA-binding protein SmpB	fig|6666666.71390.peg.3584
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Heat shock protein GrpE	fig|6666666.71390.peg.7213
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Translation elongation factor LepA	fig|6666666.71390.peg.192
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.71390.peg.1896
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.71390.peg.2003
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.71390.peg.2001
Stress Response	Heat shock	Heat shock dnaK gene cluster extended	rRNA small subunit methyltransferase I	fig|6666666.71390.peg.3309
Stress Response	Detoxification	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	fig|6666666.71390.peg.1108
Stress Response	Detoxification	Uptake of selenate and selenite	Various polyols ABC transporter, permease component 2	fig|6666666.71390.peg.7629
Stress Response	Detoxification	Uptake of selenate and selenite	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.71390.peg.225, <br>fig|6666666.71390.peg.2369, <br>fig|6666666.71390.peg.5722
Stress Response	Detoxification	Uptake of selenate and selenite	DedA protein	fig|6666666.71390.peg.7250
Stress Response	Detoxification	Uptake of selenate and selenite	Various polyols ABC transporter, periplasmic substrate-binding protein	fig|6666666.71390.peg.941
Stress Response	Detoxification	Uptake of selenate and selenite	Various polyols ABC transporter, permease component 1	fig|6666666.71390.peg.764
Stress Response	Stress Response - no subcategory	Flavohaemoglobin	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.71390.peg.4420
Stress Response	Stress Response - no subcategory	SigmaB stress responce regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.71390.peg.3898
Stress Response	Stress Response - no subcategory	SigmaB stress responce regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.71390.peg.4693, <br>fig|6666666.71390.peg.6236
Stress Response	Stress Response - no subcategory	SigmaB stress responce regulation	RNA polymerase sigma factor SigB	fig|6666666.71390.peg.2646, <br>fig|6666666.71390.peg.3897
Stress Response	Stress Response - no subcategory	SigmaB stress responce regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.71390.peg.3896, <br>fig|6666666.71390.peg.3908, <br>fig|6666666.71390.peg.6238, <br>fig|6666666.71390.peg.7069
Stress Response	Stress Response - no subcategory	Dimethylarginine metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.71390.peg.4358
Stress Response	Stress Response - no subcategory	Dimethylarginine metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.71390.peg.4357
Stress Response	Stress Response - no subcategory	Bacterial hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.71390.peg.4508
Stress Response	Stress Response - no subcategory	Bacterial hemoglobins	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	fig|6666666.71390.peg.4420
Stress Response	Stress Response - no subcategory	Bacterial hemoglobins	Copper binding protein, plastocyanin/azurin family	fig|6666666.71390.peg.1812, <br>fig|6666666.71390.peg.3957
Stress Response	Stress Response - no subcategory	Bacterial hemoglobins	Cyanoglobin	fig|6666666.71390.peg.7337
Stress Response	Stress Response - no subcategory	Bacterial hemoglobins	Hemoglobin-like protein HbO	fig|6666666.71390.peg.49
Stress Response	Stress Response - no subcategory	Hfl operon	GTP-binding protein HflX	fig|6666666.71390.peg.2631
Stress Response	Stress Response - no subcategory	Carbon Starvation	Carbon starvation protein A	fig|6666666.71390.peg.3428
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Salicylate ester degradation	salicylate esterase	fig|6666666.71390.peg.1335
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Salicylate ester degradation	Salicylate hydroxylase (EC 1.14.13.1)	fig|6666666.71390.peg.123, <br>fig|6666666.71390.peg.342, <br>fig|6666666.71390.peg.1336, <br>fig|6666666.71390.peg.4104, <br>fig|6666666.71390.peg.4545
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Quinate degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.71390.peg.3771
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	2-keto-4-pentenoate hydratase (EC 4.2.1.80)	fig|6666666.71390.peg.5128
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol	fig|6666666.71390.peg.4072, <br>fig|6666666.71390.peg.5127, <br>fig|6666666.71390.peg.4072, <br>fig|6666666.71390.peg.5127
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.71390.peg.6655
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	Large subunit naph/bph dioxygenase	fig|6666666.71390.peg.4079
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39)	fig|6666666.71390.peg.4076, <br>fig|6666666.71390.peg.4082
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)	fig|6666666.71390.peg.2035, <br>fig|6666666.71390.peg.2554, <br>fig|6666666.71390.peg.4083, <br>fig|6666666.71390.peg.6351
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	biphenyl-2,3-diol 1,2-dioxygenase III-related protein	fig|6666666.71390.peg.1294
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Biphenyl Degradation	Dihydrodiol dehydrogenase (EC 1.3.1.56)	fig|6666666.71390.peg.4095
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Benzoate degradation	Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)	fig|6666666.71390.peg.3799
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Benzoate degradation	Benzoate transport protein	fig|6666666.71390.peg.5937
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Benzoate degradation	1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)	fig|6666666.71390.peg.2184, <br>fig|6666666.71390.peg.3801
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Benzoate degradation	benABC operon transcriptional activator BenR	fig|6666666.71390.peg.4978
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	Benzoate degradation	Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)	fig|6666666.71390.peg.3800
Metabolism of Aromatic Compounds	Peripheral pathways for catabolism of aromatic compounds	p-Hydroxybenzoate degradation	4-hydroxybenzoate transporter	fig|6666666.71390.peg.2185
Metabolism of Aromatic Compounds	Anaerobic degradation of aromatic compounds	Acetophenone carboxylase 1	Acetophenone carboxylase subunit Apc4	fig|6666666.71390.peg.6906
Metabolism of Aromatic Compounds	Anaerobic degradation of aromatic compounds	Acetophenone carboxylase 1	Acetophenone carboxylase subunit Apc1	fig|6666666.71390.peg.6909
Metabolism of Aromatic Compounds	Anaerobic degradation of aromatic compounds	Acetophenone carboxylase 1	Acetophenone carboxylase subunit Apc3	fig|6666666.71390.peg.6907
Metabolism of Aromatic Compounds	Anaerobic degradation of aromatic compounds	Acetophenone carboxylase 1	Acetophenone carboxylase subunit Apc2	fig|6666666.71390.peg.6908
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6)	fig|6666666.71390.peg.162
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)	fig|6666666.71390.peg.161
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.71390.peg.3805, <br>fig|6666666.71390.peg.6913
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.71390.peg.3806, <br>fig|6666666.71390.peg.6912
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	Muconate cycloisomerase (EC 5.5.1.1)	fig|6666666.71390.peg.3797
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.71390.peg.3807, <br>fig|6666666.71390.peg.5037, <br>fig|6666666.71390.peg.6051
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	Catechol 1,2-dioxygenase (EC 1.13.11.1)	fig|6666666.71390.peg.3796
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Catechol branch of beta-ketoadipate pathway	Muconolactone isomerase (EC 5.3.3.4)	fig|6666666.71390.peg.3795
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Salicylate and gentisate catabolism	Fumarylacetoacetase (EC 3.7.1.2)	fig|6666666.71390.peg.934, <br>fig|6666666.71390.peg.6982, <br>fig|6666666.71390.peg.7090
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Salicylate and gentisate catabolism	4-hydroxybenzoate transporter	fig|6666666.71390.peg.2185
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Salicylate and gentisate catabolism	salicylate esterase	fig|6666666.71390.peg.1335
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Salicylate and gentisate catabolism	Salicylate hydroxylase (EC 1.14.13.1)	fig|6666666.71390.peg.123, <br>fig|6666666.71390.peg.342, <br>fig|6666666.71390.peg.1336, <br>fig|6666666.71390.peg.4104, <br>fig|6666666.71390.peg.4545
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Salicylate and gentisate catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.71390.peg.1214, <br>fig|6666666.71390.peg.5665, <br>fig|6666666.71390.peg.6875, <br>fig|6666666.71390.peg.6943
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6)	fig|6666666.71390.peg.162
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)	fig|6666666.71390.peg.161
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	dicarboxylic acid transporter PcaT	fig|6666666.71390.peg.4680
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.71390.peg.3779, <br>fig|6666666.71390.peg.5043, <br>fig|6666666.71390.peg.6223, <br>fig|6666666.71390.peg.6363
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.71390.peg.3805, <br>fig|6666666.71390.peg.6913
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.71390.peg.3806, <br>fig|6666666.71390.peg.6912
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	fig|6666666.71390.peg.3807, <br>fig|6666666.71390.peg.5037, <br>fig|6666666.71390.peg.6051
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)	fig|6666666.71390.peg.3776
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)	fig|6666666.71390.peg.3778
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Protocatechuate branch of beta-ketoadipate pathway	Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)	fig|6666666.71390.peg.3777
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	N-heterocyclic aromatic compound degradation	1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase	fig|6666666.71390.peg.4105
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Homogentisate pathway of aromatic compound degradation	Transcriptional regulator, IclR family	fig|6666666.71390.peg.842, <br>fig|6666666.71390.peg.983, <br>fig|6666666.71390.peg.1388, <br>fig|6666666.71390.peg.1410, <br>fig|6666666.71390.peg.2034, <br>fig|6666666.71390.peg.2186, <br>fig|6666666.71390.peg.2280, <br>fig|6666666.71390.peg.2662, <br>fig|6666666.71390.peg.2696, <br>fig|6666666.71390.peg.2967, <br>fig|6666666.71390.peg.3470, <br>fig|6666666.71390.peg.3514, <br>fig|6666666.71390.peg.3549, <br>fig|6666666.71390.peg.4087, <br>fig|6666666.71390.peg.5120, <br>fig|6666666.71390.peg.5207, <br>fig|6666666.71390.peg.5515, <br>fig|6666666.71390.peg.5550, <br>fig|6666666.71390.peg.6884, <br>fig|6666666.71390.peg.6911, <br>fig|6666666.71390.peg.6986, <br>fig|6666666.71390.peg.7049, <br>fig|6666666.71390.peg.7370, <br>fig|6666666.71390.peg.7513, <br>fig|6666666.71390.peg.7678
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Homogentisate pathway of aromatic compound degradation	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)	fig|6666666.71390.peg.3600, <br>fig|6666666.71390.peg.6981
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Homogentisate pathway of aromatic compound degradation	Fumarylacetoacetase (EC 3.7.1.2)	fig|6666666.71390.peg.934, <br>fig|6666666.71390.peg.6982, <br>fig|6666666.71390.peg.7090
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Homogentisate pathway of aromatic compound degradation	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	fig|6666666.71390.peg.91, <br>fig|6666666.71390.peg.3772, <br>fig|6666666.71390.peg.6980
Metabolism of Aromatic Compounds	Metabolism of central aromatic intermediates	Homogentisate pathway of aromatic compound degradation	Aromatic-amino-acid aminotransferase (EC 2.6.1.57)	fig|6666666.71390.peg.4249
Metabolism of Aromatic Compounds	Metabolism of Aromatic Compounds - no subcategory	Aromatic Amin Catabolism	4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)	fig|6666666.71390.peg.4101
Metabolism of Aromatic Compounds	Metabolism of Aromatic Compounds - no subcategory	Aromatic Amin Catabolism	Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)	fig|6666666.71390.peg.6353, <br>fig|6666666.71390.peg.6787, <br>fig|6666666.71390.peg.7425
Metabolism of Aromatic Compounds	Metabolism of Aromatic Compounds - no subcategory	Aromatic Amin Catabolism	Monoamine oxidase (1.4.3.4)	fig|6666666.71390.peg.1329, <br>fig|6666666.71390.peg.2436, <br>fig|6666666.71390.peg.2972, <br>fig|6666666.71390.peg.7517
Metabolism of Aromatic Compounds	Metabolism of Aromatic Compounds - no subcategory	Gentisate degradation	4-hydroxybenzoate transporter	fig|6666666.71390.peg.2185
Metabolism of Aromatic Compounds	Metabolism of Aromatic Compounds - no subcategory	Gentisate degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.71390.peg.1214, <br>fig|6666666.71390.peg.5665, <br>fig|6666666.71390.peg.6875, <br>fig|6666666.71390.peg.6943
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamine synthetase family protein in hypothetical Actinobacterial gene cluster	fig|6666666.71390.peg.2498
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.71390.peg.981, <br>fig|6666666.71390.peg.2202, <br>fig|6666666.71390.peg.3536, <br>fig|6666666.71390.peg.4169, <br>fig|6666666.71390.peg.5533, <br>fig|6666666.71390.peg.5656, <br>fig|6666666.71390.peg.5861, <br>fig|6666666.71390.peg.6795, <br>fig|6666666.71390.peg.7171
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form	fig|6666666.71390.peg.45
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.71390.peg.5983, <br>fig|6666666.71390.peg.7040
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.71390.peg.1129, <br>fig|6666666.71390.peg.2495
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.71390.peg.1354, <br>fig|6666666.71390.peg.1977
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.71390.peg.413, <br>fig|6666666.71390.peg.895, <br>fig|6666666.71390.peg.5768
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.71390.peg.356, <br>fig|6666666.71390.peg.416, <br>fig|6666666.71390.peg.1103, <br>fig|6666666.71390.peg.1109, <br>fig|6666666.71390.peg.1808, <br>fig|6666666.71390.peg.5593, <br>fig|6666666.71390.peg.6082
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.71390.peg.90
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.71390.peg.3305, <br>fig|6666666.71390.peg.5983, <br>fig|6666666.71390.peg.7040
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	fig|6666666.71390.peg.3952
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.71390.peg.5213, <br>fig|6666666.71390.peg.5320, <br>fig|6666666.71390.peg.5514
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	glutamine synthetase family protein	fig|6666666.71390.peg.1346, <br>fig|6666666.71390.peg.1347, <br>fig|6666666.71390.peg.6847, <br>fig|6666666.71390.peg.7482
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.71390.peg.830
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.71390.peg.1999, <br>fig|6666666.71390.peg.3215
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.71390.peg.896, <br>fig|6666666.71390.peg.5769
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamate synthase [NADPH] putative GlxC chain (EC 1.4.1.13)	fig|6666666.71390.peg.414
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamine amidotransferase class-I (EC 6.3.5.2)	fig|6666666.71390.peg.1184
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	Glutamine amidotransferase protein GlxB (EC 2.4.2.-)	fig|6666666.71390.peg.415
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamate dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.71390.peg.3305, <br>fig|6666666.71390.peg.5983, <br>fig|6666666.71390.peg.7040
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamate dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form	fig|6666666.71390.peg.45
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamate dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.71390.peg.5983, <br>fig|6666666.71390.peg.7040
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.71390.peg.356, <br>fig|6666666.71390.peg.416, <br>fig|6666666.71390.peg.1103, <br>fig|6666666.71390.peg.1109, <br>fig|6666666.71390.peg.1808, <br>fig|6666666.71390.peg.5593, <br>fig|6666666.71390.peg.6082
Amino Acids and Derivatives	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation	Glutamine synthetases	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.71390.peg.90
Amino Acids and Derivatives	Histidine Metabolism	Histidine Degradation	Conserved hypothetical protein (perhaps related to histidine degradation)	fig|6666666.71390.peg.6796
Amino Acids and Derivatives	Histidine Metabolism	Histidine Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.71390.peg.6797
Amino Acids and Derivatives	Histidine Metabolism	Histidine Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.71390.peg.5202, <br>fig|6666666.71390.peg.6800
Amino Acids and Derivatives	Histidine Metabolism	Histidine Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.71390.peg.6802
Amino Acids and Derivatives	Histidine Metabolism	Histidine Degradation	Formiminoglutamic iminohydrolase (EC 3.5.3.13)	fig|6666666.71390.peg.6798
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.71390.peg.877
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.71390.peg.1239, <br>fig|6666666.71390.peg.1242
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	fig|6666666.71390.peg.876
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	fig|6666666.71390.peg.878, <br>fig|6666666.71390.peg.3592
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.71390.peg.874, <br>fig|6666666.71390.peg.1463
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.71390.peg.875
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	fig|6666666.71390.peg.879
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.71390.peg.880
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.71390.peg.1243
Amino Acids and Derivatives	Histidine Metabolism	Histidine Biosynthesis	Histidinol dehydrogenase (EC 1.1.1.23)	fig|6666666.71390.peg.873, <br>fig|6666666.71390.peg.5215
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Putrescine utilization pathways	Putrescine importer	fig|6666666.71390.peg.4271, <br>fig|6666666.71390.peg.6821
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Putrescine utilization pathways	4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19)	fig|6666666.71390.peg.526, <br>fig|6666666.71390.peg.2973
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Putrescine utilization pathways	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	fig|6666666.71390.peg.578, <br>fig|6666666.71390.peg.2965, <br>fig|6666666.71390.peg.7039
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Putrescine utilization pathways	Monoamine/putrescine oxidase (EC 1.4.3.10)	fig|6666666.71390.peg.5940
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Putrescine utilization pathways	Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)	fig|6666666.71390.peg.5596
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.71390.peg.4362
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2)	fig|6666666.71390.peg.961
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19)	fig|6666666.71390.peg.526, <br>fig|6666666.71390.peg.2973
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	fig|6666666.71390.peg.2139, <br>fig|6666666.71390.peg.4313
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	fig|6666666.71390.peg.2140, <br>fig|6666666.71390.peg.4312
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Agmatinase (EC 3.5.3.11)	fig|6666666.71390.peg.916, <br>fig|6666666.71390.peg.1773, <br>fig|6666666.71390.peg.1823, <br>fig|6666666.71390.peg.4647, <br>fig|6666666.71390.peg.6251
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Putrescine transport system permease protein PotH (TC 3.A.1.11.2)	fig|6666666.71390.peg.959
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Agmatine/putrescine antiporter, associated with agmatine catabolism	fig|6666666.71390.peg.5322
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.71390.peg.1413, <br>fig|6666666.71390.peg.2142, <br>fig|6666666.71390.peg.4310
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.71390.peg.3651, <br>fig|6666666.71390.peg.6819
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.71390.peg.5986, <br>fig|6666666.71390.peg.6615, <br>fig|6666666.71390.peg.6640, <br>fig|6666666.71390.peg.7037
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Putrescine transport system permease protein PotI (TC 3.A.1.11.2)	fig|6666666.71390.peg.958
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)	fig|6666666.71390.peg.960
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.71390.peg.6615, <br>fig|6666666.71390.peg.6640
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-)	fig|6666666.71390.peg.6280
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Polyamine Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.71390.peg.2141, <br>fig|6666666.71390.peg.4311
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.71390.peg.4362
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.71390.peg.238, <br>fig|6666666.71390.peg.3330
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.71390.peg.4358
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Agmatinase (EC 3.5.3.11)	fig|6666666.71390.peg.916, <br>fig|6666666.71390.peg.1773, <br>fig|6666666.71390.peg.1823, <br>fig|6666666.71390.peg.4647, <br>fig|6666666.71390.peg.6251
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.71390.peg.1428
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.71390.peg.3651, <br>fig|6666666.71390.peg.6819
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.71390.peg.5986, <br>fig|6666666.71390.peg.6615, <br>fig|6666666.71390.peg.6640, <br>fig|6666666.71390.peg.7037
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.71390.peg.6615, <br>fig|6666666.71390.peg.6640
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.71390.peg.1427
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.71390.peg.3305, <br>fig|6666666.71390.peg.5983, <br>fig|6666666.71390.peg.7040
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine and Ornithine Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.71390.peg.3311, <br>fig|6666666.71390.peg.4361
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.71390.peg.2950
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	N-acetylglutamate synthase related protein	fig|6666666.71390.peg.7573
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Acetylornithine deacetylase (EC 3.5.1.16)	fig|6666666.71390.peg.2219, <br>fig|6666666.71390.peg.3100, <br>fig|6666666.71390.peg.6661
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.71390.peg.1424
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.71390.peg.1425
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.71390.peg.1424
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.71390.peg.1428
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.71390.peg.1430
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.71390.peg.1429
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.71390.peg.1423
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.71390.peg.1427
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis -- gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.71390.peg.1426, <br>fig|6666666.71390.peg.6725
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Cyanophycin Metabolism	Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30)	fig|6666666.71390.peg.2494
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Cyanophycin Metabolism	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.71390.peg.1129, <br>fig|6666666.71390.peg.2495
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea carboxylase and Allophanate hydrolase cluster	Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)	fig|6666666.71390.peg.158, <br>fig|6666666.71390.peg.6811
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea carboxylase and Allophanate hydrolase cluster	Lactam utilization protein LamB	fig|6666666.71390.peg.157, <br>fig|6666666.71390.peg.6331
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea carboxylase and Allophanate hydrolase cluster	Allophanate hydrolase (EC 3.5.1.54)	fig|6666666.71390.peg.3491
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea carboxylase and Allophanate hydrolase cluster	Biotin carboxyl carrier protein	fig|6666666.71390.peg.3791
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea carboxylase and Allophanate hydrolase cluster	Partial urea carboxylase (EC 6.3.4.6)	fig|6666666.71390.peg.3492
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea carboxylase and Allophanate hydrolase cluster	Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)	fig|6666666.71390.peg.159, <br>fig|6666666.71390.peg.6810
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Deiminase Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.71390.peg.4362
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Deiminase Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.71390.peg.1428
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Deiminase Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.71390.peg.1427
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Deiminase Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.71390.peg.3311, <br>fig|6666666.71390.peg.4361
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urease subunits	Urease accessory protein UreD	fig|6666666.71390.peg.1732, <br>fig|6666666.71390.peg.7401
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urease subunits	Urease accessory protein UreF	fig|6666666.71390.peg.1730, <br>fig|6666666.71390.peg.7399
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urease subunits	Urease beta subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1728, <br>fig|6666666.71390.peg.7404
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urease subunits	Urease accessory protein UreG	fig|6666666.71390.peg.1731, <br>fig|6666666.71390.peg.7402
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urease subunits	Urea channel UreI	fig|6666666.71390.peg.4234, <br>fig|6666666.71390.peg.5185
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urease subunits	Urease gamma subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1727
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urease subunits	Urease alpha subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1729, <br>fig|6666666.71390.peg.7403
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.71390.peg.2950
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Acetylornithine deacetylase (EC 3.5.1.16)	fig|6666666.71390.peg.2219, <br>fig|6666666.71390.peg.3100, <br>fig|6666666.71390.peg.6661
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Glutamate N-acetyltransferase (EC 2.3.1.35)	fig|6666666.71390.peg.1424
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.71390.peg.1425
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.71390.peg.1424
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.71390.peg.1428
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.71390.peg.1430
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.71390.peg.1429
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.71390.peg.1423
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.71390.peg.1427
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Arginine Biosynthesis extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.71390.peg.1426, <br>fig|6666666.71390.peg.6725
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urease accessory protein UreF	fig|6666666.71390.peg.1730, <br>fig|6666666.71390.peg.7399
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Allophanate hydrolase (EC 3.5.1.54)	fig|6666666.71390.peg.3491
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea ABC transporter, ATPase protein UrtE	fig|6666666.71390.peg.606
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea ABC transporter, ATPase protein UrtD	fig|6666666.71390.peg.607
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea ABC transporter, permease protein UrtB	fig|6666666.71390.peg.609
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urease accessory protein UreD	fig|6666666.71390.peg.1732, <br>fig|6666666.71390.peg.7401
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urease beta subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1728, <br>fig|6666666.71390.peg.7404
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea carboxylase-related amino acid permease	fig|6666666.71390.peg.3495, <br>fig|6666666.71390.peg.3506, <br>fig|6666666.71390.peg.4650, <br>fig|6666666.71390.peg.5027, <br>fig|6666666.71390.peg.6249, <br>fig|6666666.71390.peg.6360
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea channel UreI	fig|6666666.71390.peg.4234, <br>fig|6666666.71390.peg.5185
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea ABC transporter, substrate binding protein UrtA	fig|6666666.71390.peg.610
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea ABC transporter, permease protein UrtC	fig|6666666.71390.peg.608
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)	fig|6666666.71390.peg.588, <br>fig|6666666.71390.peg.3493, <br>fig|6666666.71390.peg.3494
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urease gamma subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1727
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urease alpha subunit (EC 3.5.1.5)	fig|6666666.71390.peg.1729, <br>fig|6666666.71390.peg.7403
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Partial urea carboxylase (EC 6.3.4.6)	fig|6666666.71390.peg.3492
Amino Acids and Derivatives	Arginine; urea cycle, polyamines	Urea decomposition	Urease accessory protein UreG	fig|6666666.71390.peg.1731, <br>fig|6666666.71390.peg.7402
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.71390.peg.507
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.71390.peg.187
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.71390.peg.4392
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.71390.peg.699
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	fig|6666666.71390.peg.4040, <br>fig|6666666.71390.peg.5030, <br>fig|6666666.71390.peg.6589
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.71390.peg.2289, <br>fig|6666666.71390.peg.3157
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.71390.peg.505
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.71390.peg.32
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	fig|6666666.71390.peg.1235
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.71390.peg.2851
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.71390.peg.3693, <br>fig|6666666.71390.peg.4041
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	fig|6666666.71390.peg.4040, <br>fig|6666666.71390.peg.5030, <br>fig|6666666.71390.peg.6589
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.71390.peg.188
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.71390.peg.3840
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Methionine Biosynthesis	Cystathionine beta-synthase (EC 4.2.1.22)	fig|6666666.71390.peg.3163
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine and Homoserine Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.71390.peg.507
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine and Homoserine Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.71390.peg.6089
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine and Homoserine Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.71390.peg.981, <br>fig|6666666.71390.peg.2202, <br>fig|6666666.71390.peg.3536, <br>fig|6666666.71390.peg.4169, <br>fig|6666666.71390.peg.5533, <br>fig|6666666.71390.peg.5656, <br>fig|6666666.71390.peg.5861, <br>fig|6666666.71390.peg.6795, <br>fig|6666666.71390.peg.7171
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine and Homoserine Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.71390.peg.506
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine and Homoserine Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.71390.peg.505
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine and Homoserine Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.71390.peg.6088
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine degradation	Threonine dehydrogenase and related Zn-dependent dehydrogenases	fig|6666666.71390.peg.2862, <br>fig|6666666.71390.peg.4152, <br>fig|6666666.71390.peg.4556, <br>fig|6666666.71390.peg.6828, <br>fig|6666666.71390.peg.6904, <br>fig|6666666.71390.peg.7141, <br>fig|6666666.71390.peg.7388
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine degradation	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.71390.peg.155, <br>fig|6666666.71390.peg.849
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine degradation	Monoamine oxidase (1.4.3.4)	fig|6666666.71390.peg.1329, <br>fig|6666666.71390.peg.2436, <br>fig|6666666.71390.peg.2972, <br>fig|6666666.71390.peg.7517
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine degradation	low-specificity D-threonine aldolase	fig|6666666.71390.peg.1386
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine degradation	Threonine dehydratase, catabolic (EC 4.3.1.19)	fig|6666666.71390.peg.1825
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Threonine degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.71390.peg.319
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.71390.peg.2950
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.71390.peg.2340
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.71390.peg.2951
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.71390.peg.2630
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.71390.peg.6089
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.71390.peg.844
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.71390.peg.508, <br>fig|6666666.71390.peg.1685, <br>fig|6666666.71390.peg.2215, <br>fig|6666666.71390.peg.3246, <br>fig|6666666.71390.peg.3247, <br>fig|6666666.71390.peg.3248, <br>fig|6666666.71390.peg.3285, <br>fig|6666666.71390.peg.6157
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.71390.peg.2990
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.71390.peg.6088
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway, GJO scratch	N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17)	fig|6666666.71390.peg.6725
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Cysteine synthase B (EC 2.5.1.47)	fig|6666666.71390.peg.1997, <br>fig|6666666.71390.peg.6151
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.71390.peg.2289, <br>fig|6666666.71390.peg.3157
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Adenylylsulfate kinase (EC 2.7.1.25)	fig|6666666.71390.peg.2812, <br>fig|6666666.71390.peg.7112
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate and thiosulfate binding protein CysP	fig|6666666.71390.peg.222
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate transport system permease protein CysW	fig|6666666.71390.peg.224
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate transport system permease protein CysT	fig|6666666.71390.peg.223
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.71390.peg.2851
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.71390.peg.232
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.71390.peg.2812, <br>fig|6666666.71390.peg.7112
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.71390.peg.2813, <br>fig|6666666.71390.peg.7113
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate permease	fig|6666666.71390.peg.3175, <br>fig|6666666.71390.peg.4511, <br>fig|6666666.71390.peg.5774
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.71390.peg.1473
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.71390.peg.225, <br>fig|6666666.71390.peg.2369, <br>fig|6666666.71390.peg.5722
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2)	fig|6666666.71390.peg.2325
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Cysteine Biosynthesis	Cystathionine beta-synthase (EC 4.2.1.22)	fig|6666666.71390.peg.3163
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine degradation	Lysine decarboxylase (EC 4.1.1.18)	fig|6666666.71390.peg.3561, <br>fig|6666666.71390.peg.3836, <br>fig|6666666.71390.peg.5986, <br>fig|6666666.71390.peg.6615, <br>fig|6666666.71390.peg.6640
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine degradation	L-lysine permease	fig|6666666.71390.peg.2775
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine degradation	5-aminopentanamidase (EC 3.5.1.30)	fig|6666666.71390.peg.241, <br>fig|6666666.71390.peg.6250
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.71390.peg.2950
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.71390.peg.2340
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.71390.peg.2951
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.71390.peg.2630
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.71390.peg.6089
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.71390.peg.844
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.71390.peg.508, <br>fig|6666666.71390.peg.1685, <br>fig|6666666.71390.peg.2215, <br>fig|6666666.71390.peg.3246, <br>fig|6666666.71390.peg.3247, <br>fig|6666666.71390.peg.3248, <br>fig|6666666.71390.peg.3285, <br>fig|6666666.71390.peg.6157
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	fig|6666666.71390.peg.2990
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.71390.peg.6088
Amino Acids and Derivatives	Lysine, threonine, methionine, and cysteine	Lysine Biosynthesis DAP Pathway	N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17)	fig|6666666.71390.peg.6725
Amino Acids and Derivatives	Amino Acids and Derivatives - no subcategory	Creatine and Creatinine Degradation	Creatinase (EC 3.5.3.3)	fig|6666666.71390.peg.3469
Amino Acids and Derivatives	Amino Acids and Derivatives - no subcategory	Creatine and Creatinine Degradation	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.71390.peg.65, <br>fig|6666666.71390.peg.3412
Amino Acids and Derivatives	Amino Acids and Derivatives - no subcategory	Creatine and Creatinine Degradation	Creatinine amidohydrolase (EC 3.5.2.10)	fig|6666666.71390.peg.6968
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	fig|6666666.71390.peg.622, <br>fig|6666666.71390.peg.2553, <br>fig|6666666.71390.peg.3734, <br>fig|6666666.71390.peg.5096, <br>fig|6666666.71390.peg.5198, <br>fig|6666666.71390.peg.6395, <br>fig|6666666.71390.peg.7086
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.71390.peg.1121, <br>fig|6666666.71390.peg.5026
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	fig|6666666.71390.peg.20, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17)	fig|6666666.71390.peg.7409
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Probable acyl-CoA dehydrogenase (EC 1.3.99.3)	fig|6666666.71390.peg.3594
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.71390.peg.23, <br>fig|6666666.71390.peg.142, <br>fig|6666666.71390.peg.786, <br>fig|6666666.71390.peg.1096, <br>fig|6666666.71390.peg.1408, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.1791, <br>fig|6666666.71390.peg.2029, <br>fig|6666666.71390.peg.2058, <br>fig|6666666.71390.peg.2207, <br>fig|6666666.71390.peg.3048, <br>fig|6666666.71390.peg.3055, <br>fig|6666666.71390.peg.3453, <br>fig|6666666.71390.peg.3455, <br>fig|6666666.71390.peg.3458, <br>fig|6666666.71390.peg.3461, <br>fig|6666666.71390.peg.3462, <br>fig|6666666.71390.peg.3463, <br>fig|6666666.71390.peg.3812, <br>fig|6666666.71390.peg.4151, <br>fig|6666666.71390.peg.4379, <br>fig|6666666.71390.peg.4823, <br>fig|6666666.71390.peg.5076, <br>fig|6666666.71390.peg.5102, <br>fig|6666666.71390.peg.5625, <br>fig|6666666.71390.peg.5695, <br>fig|6666666.71390.peg.5734, <br>fig|6666666.71390.peg.6551, <br>fig|6666666.71390.peg.6698, <br>fig|6666666.71390.peg.6853, <br>fig|6666666.71390.peg.6960, <br>fig|6666666.71390.peg.6961, <br>fig|6666666.71390.peg.7243, <br>fig|6666666.71390.peg.7526, <br>fig|6666666.71390.peg.7667, <br>fig|6666666.71390.peg.7680
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.71390.peg.1416, <br>fig|6666666.71390.peg.3782, <br>fig|6666666.71390.peg.6892
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.71390.peg.22, <br>fig|6666666.71390.peg.1115, <br>fig|6666666.71390.peg.6976
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.2549, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3185, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	fig|6666666.71390.peg.21, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.71390.peg.239, <br>fig|6666666.71390.peg.240, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509, <br>fig|6666666.71390.peg.7409
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)	fig|6666666.71390.peg.7408
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.7206, <br>fig|6666666.71390.peg.7566
Amino Acids and Derivatives	Branched-chain amino acids	Isoleucine degradation	Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)	fig|6666666.71390.peg.4241
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	fig|6666666.71390.peg.19, <br>fig|6666666.71390.peg.3603, <br>fig|6666666.71390.peg.7050
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.71390.peg.1121, <br>fig|6666666.71390.peg.5026
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	fig|6666666.71390.peg.3362
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	fig|6666666.71390.peg.15, <br>fig|6666666.71390.peg.3359, <br>fig|6666666.71390.peg.3875
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	fig|6666666.71390.peg.20, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	fig|6666666.71390.peg.16, <br>fig|6666666.71390.peg.3360
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.71390.peg.3805, <br>fig|6666666.71390.peg.6913
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Acetoacetyl-CoA synthetase (EC 6.2.1.16)	fig|6666666.71390.peg.2944, <br>fig|6666666.71390.peg.6372, <br>fig|6666666.71390.peg.7510
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Leucine dehydrogenase (EC 1.4.1.9)	fig|6666666.71390.peg.7479
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.71390.peg.22, <br>fig|6666666.71390.peg.1115, <br>fig|6666666.71390.peg.6976
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.71390.peg.3806, <br>fig|6666666.71390.peg.6912
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	fig|6666666.71390.peg.21, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10)	fig|6666666.71390.peg.2107
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.7206, <br>fig|6666666.71390.peg.7566
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)	fig|6666666.71390.peg.4241
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Degradation and HMG-CoA Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.3977, <br>fig|6666666.71390.peg.4818, <br>fig|6666666.71390.peg.5523, <br>fig|6666666.71390.peg.7566
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.71390.peg.2283
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.71390.peg.885, <br>fig|6666666.71390.peg.6077
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.71390.peg.1121, <br>fig|6666666.71390.peg.5026
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Threonine dehydratase (EC 4.3.1.19)	fig|6666666.71390.peg.155, <br>fig|6666666.71390.peg.849
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.71390.peg.2274, <br>fig|6666666.71390.peg.6445, <br>fig|6666666.71390.peg.7061
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.71390.peg.5209
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Threonine dehydratase, catabolic (EC 4.3.1.19)	fig|6666666.71390.peg.1825
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.71390.peg.2282
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Leucine dehydrogenase (EC 1.4.1.9)	fig|6666666.71390.peg.7479
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.71390.peg.2269
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.71390.peg.2267
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Dihydroxy-acid dehydratase (EC 4.2.1.9)	fig|6666666.71390.peg.3768, <br>fig|6666666.71390.peg.6534, <br>fig|6666666.71390.peg.6574
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	fig|6666666.71390.peg.3952
Amino Acids and Derivatives	Branched-chain amino acids	Branched-Chain Amino Acid Biosynthesis	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.71390.peg.2268
Amino Acids and Derivatives	Branched-chain amino acids	HMG CoA Synthesis	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	fig|6666666.71390.peg.19, <br>fig|6666666.71390.peg.3603, <br>fig|6666666.71390.peg.7050
Amino Acids and Derivatives	Branched-chain amino acids	HMG CoA Synthesis	Acetoacetyl-CoA synthetase (EC 6.2.1.16)	fig|6666666.71390.peg.2944, <br>fig|6666666.71390.peg.6372, <br>fig|6666666.71390.peg.7510
Amino Acids and Derivatives	Branched-chain amino acids	HMG CoA Synthesis	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	fig|6666666.71390.peg.3362
Amino Acids and Derivatives	Branched-chain amino acids	HMG CoA Synthesis	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	fig|6666666.71390.peg.15, <br>fig|6666666.71390.peg.3359, <br>fig|6666666.71390.peg.3875
Amino Acids and Derivatives	Branched-chain amino acids	HMG CoA Synthesis	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	fig|6666666.71390.peg.16, <br>fig|6666666.71390.peg.3360
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.71390.peg.1121, <br>fig|6666666.71390.peg.5026
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)	fig|6666666.71390.peg.4242, <br>fig|6666666.71390.peg.5044, <br>fig|6666666.71390.peg.5074, <br>fig|6666666.71390.peg.5965
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)	fig|6666666.71390.peg.2346, <br>fig|6666666.71390.peg.4240, <br>fig|6666666.71390.peg.6524
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	fig|6666666.71390.peg.20, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)	fig|6666666.71390.peg.3169
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Probable acyl-CoA dehydrogenase (EC 1.3.99.3)	fig|6666666.71390.peg.3594
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.71390.peg.23, <br>fig|6666666.71390.peg.142, <br>fig|6666666.71390.peg.786, <br>fig|6666666.71390.peg.1096, <br>fig|6666666.71390.peg.1408, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.1791, <br>fig|6666666.71390.peg.2029, <br>fig|6666666.71390.peg.2058, <br>fig|6666666.71390.peg.2207, <br>fig|6666666.71390.peg.3048, <br>fig|6666666.71390.peg.3055, <br>fig|6666666.71390.peg.3453, <br>fig|6666666.71390.peg.3455, <br>fig|6666666.71390.peg.3458, <br>fig|6666666.71390.peg.3461, <br>fig|6666666.71390.peg.3462, <br>fig|6666666.71390.peg.3463, <br>fig|6666666.71390.peg.3812, <br>fig|6666666.71390.peg.4151, <br>fig|6666666.71390.peg.4379, <br>fig|6666666.71390.peg.4823, <br>fig|6666666.71390.peg.5076, <br>fig|6666666.71390.peg.5102, <br>fig|6666666.71390.peg.5625, <br>fig|6666666.71390.peg.5695, <br>fig|6666666.71390.peg.5734, <br>fig|6666666.71390.peg.6551, <br>fig|6666666.71390.peg.6698, <br>fig|6666666.71390.peg.6853, <br>fig|6666666.71390.peg.6960, <br>fig|6666666.71390.peg.6961, <br>fig|6666666.71390.peg.7243, <br>fig|6666666.71390.peg.7526, <br>fig|6666666.71390.peg.7667, <br>fig|6666666.71390.peg.7680
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.71390.peg.1416, <br>fig|6666666.71390.peg.3782, <br>fig|6666666.71390.peg.6892
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.71390.peg.22, <br>fig|6666666.71390.peg.1115, <br>fig|6666666.71390.peg.6976
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)	fig|6666666.71390.peg.3170, <br>fig|6666666.71390.peg.6610
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	fig|6666666.71390.peg.21, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.71390.peg.239, <br>fig|6666666.71390.peg.240, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509, <br>fig|6666666.71390.peg.7409
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.7206, <br>fig|6666666.71390.peg.7566
Amino Acids and Derivatives	Branched-chain amino acids	Valine degradation	Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)	fig|6666666.71390.peg.4241
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.71390.peg.2283
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.71390.peg.2282
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.71390.peg.885, <br>fig|6666666.71390.peg.6077
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.71390.peg.1121, <br>fig|6666666.71390.peg.5026
Amino Acids and Derivatives	Branched-chain amino acids	Leucine Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.71390.peg.2274, <br>fig|6666666.71390.peg.6445, <br>fig|6666666.71390.peg.7061
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.71390.peg.3816
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC 2.5.1.-)	fig|6666666.71390.peg.2443
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.71390.peg.3320
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.71390.peg.3771
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.71390.peg.2766
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.71390.peg.665
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.71390.peg.663
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.71390.peg.1155
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.71390.peg.664
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.71390.peg.659
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)	Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)	fig|6666666.71390.peg.3774
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid interconversions with aryl acids	Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits	fig|6666666.71390.peg.6683
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.71390.peg.3816
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC 2.5.1.-)	fig|6666666.71390.peg.2443
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.71390.peg.3320
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.71390.peg.7676
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.71390.peg.3771
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.71390.peg.2766
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.71390.peg.5804
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.71390.peg.665
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.71390.peg.663
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.71390.peg.5980
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	fig|6666666.71390.peg.1155
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.71390.peg.664
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.71390.peg.659
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Periplasmic chorismate mutase I precursor (EC 5.4.99.5)	fig|6666666.71390.peg.3559
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate Synthesis	Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)	fig|6666666.71390.peg.3774
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.71390.peg.877
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.71390.peg.5360
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.71390.peg.7309
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.71390.peg.891
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.71390.peg.890
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.71390.peg.889
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.71390.peg.887
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.71390.peg.3761
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.71390.peg.3308
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Tryptophan synthase beta chain like (EC 4.2.1.20)	fig|6666666.71390.peg.998
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Isochorismatase (EC 3.3.2.1)	fig|6666666.71390.peg.2810, <br>fig|6666666.71390.peg.6085
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.71390.peg.5360
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Phenylalanine and Tyrosine Branches from Chorismate	Periplasmic chorismate mutase I precursor (EC 5.4.99.5)	fig|6666666.71390.peg.3559
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Phenylalanine and Tyrosine Branches from Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.71390.peg.7676
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Phenylalanine and Tyrosine Branches from Chorismate	Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91)	fig|6666666.71390.peg.5619
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Phenylalanine and Tyrosine Branches from Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.71390.peg.5804
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Phenylalanine and Tyrosine Branches from Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.71390.peg.1463, <br>fig|6666666.71390.peg.5952
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Phenylalanine and Tyrosine Branches from Chorismate	Arogenate dehydrogenase (EC 1.3.1.43)	fig|6666666.71390.peg.5980
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)	fig|6666666.71390.peg.1397, <br>fig|6666666.71390.peg.2278
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)	fig|6666666.71390.peg.1848, <br>fig|6666666.71390.peg.1852
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	fig|6666666.71390.peg.91, <br>fig|6666666.71390.peg.3772, <br>fig|6666666.71390.peg.6980
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)	fig|6666666.71390.peg.7368
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	Aromatic amino acid transport protein AroP	fig|6666666.71390.peg.3337, <br>fig|6666666.71390.peg.3501, <br>fig|6666666.71390.peg.6158
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-)	fig|6666666.71390.peg.2463, <br>fig|6666666.71390.peg.6058
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)	fig|6666666.71390.peg.1397, <br>fig|6666666.71390.peg.2278
Amino Acids and Derivatives	Aromatic amino acids and derivatives	Aromatic amino acid degradation	Phenylalanine-4-hydroxylase (EC 1.14.16.1)	fig|6666666.71390.peg.1927
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.71390.peg.4753
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.71390.peg.144
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.71390.peg.3305, <br>fig|6666666.71390.peg.5983, <br>fig|6666666.71390.peg.7040
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline Synthesis	RNA-binding C-terminal domain PUA	fig|6666666.71390.peg.136
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.71390.peg.136
Amino Acids and Derivatives	Proline and 4-hydroxyproline	A Hypothetical Protein Related to Proline Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.71390.peg.1178, <br>fig|6666666.71390.peg.3730
Amino Acids and Derivatives	Proline and 4-hydroxyproline	A Hypothetical Protein Related to Proline Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.71390.peg.4753
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline, 4-hydroxyproline uptake and utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.71390.peg.2587, <br>fig|6666666.71390.peg.6110
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline, 4-hydroxyproline uptake and utilization	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	fig|6666666.71390.peg.2957
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline, 4-hydroxyproline uptake and utilization	L-Proline/Glycine betaine transporter ProP	fig|6666666.71390.peg.841, <br>fig|6666666.71390.peg.3101, <br>fig|6666666.71390.peg.3468, <br>fig|6666666.71390.peg.4911
Amino Acids and Derivatives	Proline and 4-hydroxyproline	Proline, 4-hydroxyproline uptake and utilization	Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)	fig|6666666.71390.peg.6242, <br>fig|6666666.71390.peg.6768
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.71390.peg.3139, <br>fig|6666666.71390.peg.3140, <br>fig|6666666.71390.peg.3519, <br>fig|6666666.71390.peg.7203
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.71390.peg.319
Amino Acids and Derivatives	Alanine, serine, and glycine	Alanine biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.71390.peg.1121, <br>fig|6666666.71390.peg.5026
Amino Acids and Derivatives	Alanine, serine, and glycine	Alanine biosynthesis	Ferredoxin, 2Fe-2S	fig|6666666.71390.peg.4289, <br>fig|6666666.71390.peg.4292
Amino Acids and Derivatives	Alanine, serine, and glycine	Alanine biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.71390.peg.216, <br>fig|6666666.71390.peg.2239, <br>fig|6666666.71390.peg.4682, <br>fig|6666666.71390.peg.5874
Amino Acids and Derivatives	Alanine, serine, and glycine	Alanine biosynthesis	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.71390.peg.5209
Amino Acids and Derivatives	Alanine, serine, and glycine	Alanine biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.71390.peg.779
Amino Acids and Derivatives	Alanine, serine, and glycine	Alanine biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.71390.peg.4166
Amino Acids and Derivatives	Alanine, serine, and glycine	Serine Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.71390.peg.2273, <br>fig|6666666.71390.peg.3236, <br>fig|6666666.71390.peg.4264, <br>fig|6666666.71390.peg.6255, <br>fig|6666666.71390.peg.6264, <br>fig|6666666.71390.peg.7016, <br>fig|6666666.71390.peg.7087
Amino Acids and Derivatives	Alanine, serine, and glycine	Serine Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.71390.peg.40, <br>fig|6666666.71390.peg.1840, <br>fig|6666666.71390.peg.2200, <br>fig|6666666.71390.peg.4748, <br>fig|6666666.71390.peg.6181, <br>fig|6666666.71390.peg.40, <br>fig|6666666.71390.peg.1840, <br>fig|6666666.71390.peg.2200, <br>fig|6666666.71390.peg.4748, <br>fig|6666666.71390.peg.6181
Amino Acids and Derivatives	Alanine, serine, and glycine	Serine Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.71390.peg.3139, <br>fig|6666666.71390.peg.3140, <br>fig|6666666.71390.peg.3519, <br>fig|6666666.71390.peg.7203
Amino Acids and Derivatives	Alanine, serine, and glycine	Serine Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.71390.peg.7464
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine cleavage system	Glycine cleavage system H protein	fig|6666666.71390.peg.1710, <br>fig|6666666.71390.peg.7202
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine cleavage system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.71390.peg.1715, <br>fig|6666666.71390.peg.7200
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine cleavage system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.3977, <br>fig|6666666.71390.peg.4818, <br>fig|6666666.71390.peg.5523, <br>fig|6666666.71390.peg.7566
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine cleavage system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.71390.peg.1120, <br>fig|6666666.71390.peg.7201
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	D-serine/D-alanine/glycine transporter	fig|6666666.71390.peg.1772
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.71390.peg.2273, <br>fig|6666666.71390.peg.3236, <br>fig|6666666.71390.peg.4264, <br>fig|6666666.71390.peg.6255, <br>fig|6666666.71390.peg.6264, <br>fig|6666666.71390.peg.7016, <br>fig|6666666.71390.peg.7087
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.71390.peg.40, <br>fig|6666666.71390.peg.1840, <br>fig|6666666.71390.peg.2200, <br>fig|6666666.71390.peg.4748, <br>fig|6666666.71390.peg.6181
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Cystathionine gamma-lyase (EC 4.4.1.1)	fig|6666666.71390.peg.2289, <br>fig|6666666.71390.peg.3157
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.71390.peg.3139, <br>fig|6666666.71390.peg.3140, <br>fig|6666666.71390.peg.3519, <br>fig|6666666.71390.peg.7203
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Threonine dehydratase, catabolic (EC 4.3.1.19)	fig|6666666.71390.peg.1825
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.71390.peg.5809
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.71390.peg.7464
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Glycine cleavage system H protein	fig|6666666.71390.peg.1710, <br>fig|6666666.71390.peg.7202
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Monoamine oxidase (1.4.3.4)	fig|6666666.71390.peg.1329, <br>fig|6666666.71390.peg.2436, <br>fig|6666666.71390.peg.2972, <br>fig|6666666.71390.peg.7517
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.71390.peg.1715, <br>fig|6666666.71390.peg.7200
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.71390.peg.3530, <br>fig|6666666.71390.peg.7204
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.71390.peg.1120, <br>fig|6666666.71390.peg.7201
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Cystathionine beta-synthase (EC 4.2.1.22)	fig|6666666.71390.peg.3163
Amino Acids and Derivatives	Alanine, serine, and glycine	Glycine and Serine Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.71390.peg.2991, <br>fig|6666666.71390.peg.3129
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Adenylylsulfate kinase (EC 2.7.1.25)	fig|6666666.71390.peg.2812, <br>fig|6666666.71390.peg.7112
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfate and thiosulfate binding protein CysP	fig|6666666.71390.peg.222
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfate transport system permease protein CysW	fig|6666666.71390.peg.224
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)	fig|6666666.71390.peg.677
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfate transport system permease protein CysT	fig|6666666.71390.peg.223
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)	fig|6666666.71390.peg.2813, <br>fig|6666666.71390.peg.7113
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	fig|6666666.71390.peg.232
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)	fig|6666666.71390.peg.2812, <br>fig|6666666.71390.peg.7112
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	fig|6666666.71390.peg.233
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	fig|6666666.71390.peg.232
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfate transporter, CysZ-type	fig|6666666.71390.peg.1473
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.71390.peg.225, <br>fig|6666666.71390.peg.2369, <br>fig|6666666.71390.peg.5722
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2)	fig|6666666.71390.peg.2325
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Ferredoxin	fig|6666666.71390.peg.2046, <br>fig|6666666.71390.peg.3488, <br>fig|6666666.71390.peg.5051, <br>fig|6666666.71390.peg.5094, <br>fig|6666666.71390.peg.5591, <br>fig|6666666.71390.peg.5960, <br>fig|6666666.71390.peg.7117, <br>fig|6666666.71390.peg.7467, <br>fig|6666666.71390.peg.7682
Sulfur Metabolism	Inorganic sulfur assimilation	Inorganic Sulfur Assimilation	Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	fig|6666666.71390.peg.3488, <br>fig|6666666.71390.peg.3590, <br>fig|6666666.71390.peg.5652, <br>fig|6666666.71390.peg.5960, <br>fig|6666666.71390.peg.6754, <br>fig|6666666.71390.peg.7117, <br>fig|6666666.71390.peg.7467
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Release of Dimethyl Sulfide (DMS) from Dimethylsulfoniopropionate (DMSP)	Dimethylsulfoniopropionate (DMSP) acyl CoA transferase DddD	fig|6666666.71390.peg.243
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Thioredoxin-disulfide reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.71390.peg.1879
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Thioredoxin-disulfide reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.71390.peg.7599
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Thioredoxin-disulfide reductase	Alkylhydroperoxidase protein D	fig|6666666.71390.peg.2013
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Thioredoxin-disulfide reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.71390.peg.2148
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Thioredoxin-disulfide reductase	Alkyl hydroperoxide reductase subunit C-like protein	fig|6666666.71390.peg.449, <br>fig|6666666.71390.peg.886, <br>fig|6666666.71390.peg.1485, <br>fig|6666666.71390.peg.6504
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Thioredoxin-disulfide reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.71390.peg.2012
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Thioredoxin-disulfide reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.71390.peg.1089, <br>fig|6666666.71390.peg.4222, <br>fig|6666666.71390.peg.5449, <br>fig|6666666.71390.peg.5450
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Galactosylceramide and Sulfatide metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.71390.peg.6453
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Galactosylceramide and Sulfatide metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.71390.peg.3974
Sulfur Metabolism	Sulfur Metabolism - no subcategory	Galactosylceramide and Sulfatide metabolism	Arylsulfatase (EC 3.1.6.1)	fig|6666666.71390.peg.3115, <br>fig|6666666.71390.peg.3116, <br>fig|6666666.71390.peg.4301, <br>fig|6666666.71390.peg.4519, <br>fig|6666666.71390.peg.7615
Sulfur Metabolism	Organic sulfur assimilation	Taurine Utilization	Taurine transport ATP-binding protein TauB	fig|6666666.71390.peg.4579
Sulfur Metabolism	Organic sulfur assimilation	Taurine Utilization	Taurine transport system permease protein TauC	fig|6666666.71390.peg.4578
Sulfur Metabolism	Organic sulfur assimilation	Taurine Utilization	Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)	fig|6666666.71390.peg.538, <br>fig|6666666.71390.peg.1855, <br>fig|6666666.71390.peg.1859, <br>fig|6666666.71390.peg.3224, <br>fig|6666666.71390.peg.4135
Sulfur Metabolism	Organic sulfur assimilation	Taurine Utilization	Taurine-binding periplasmic protein TauA	fig|6666666.71390.peg.6403
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	Alkanesulfonates transport system permease protein	fig|6666666.71390.peg.1322, <br>fig|6666666.71390.peg.1323, <br>fig|6666666.71390.peg.1856, <br>fig|6666666.71390.peg.3722, <br>fig|6666666.71390.peg.7192, <br>fig|6666666.71390.peg.7685
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	probable dibenzothiophene desulfurization enzyme	fig|6666666.71390.peg.206, <br>fig|6666666.71390.peg.541, <br>fig|6666666.71390.peg.1692, <br>fig|6666666.71390.peg.2836
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.71390.peg.673, <br>fig|6666666.71390.peg.1324, <br>fig|6666666.71390.peg.1857, <br>fig|6666666.71390.peg.3416, <br>fig|6666666.71390.peg.7684
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	sulfonate monooxygenase	fig|6666666.71390.peg.7698
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	Arylsulfatase (EC 3.1.6.1)	fig|6666666.71390.peg.3115, <br>fig|6666666.71390.peg.3116, <br>fig|6666666.71390.peg.4301, <br>fig|6666666.71390.peg.4519, <br>fig|6666666.71390.peg.7615
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component	fig|6666666.71390.peg.6402, <br>fig|6666666.71390.peg.6547
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component	fig|6666666.71390.peg.6404
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	Alkanesulfonates-binding protein	fig|6666666.71390.peg.1325, <br>fig|6666666.71390.peg.1858, <br>fig|6666666.71390.peg.7686
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	FMN reductase (EC 1.5.1.29)	fig|6666666.71390.peg.1616
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)	fig|6666666.71390.peg.538, <br>fig|6666666.71390.peg.1855, <br>fig|6666666.71390.peg.1859, <br>fig|6666666.71390.peg.3224, <br>fig|6666666.71390.peg.4135
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components	fig|6666666.71390.peg.7190
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonate assimilation	Alkanesulfonate monooxygenase (EC 1.14.14.5)	fig|6666666.71390.peg.1326, <br>fig|6666666.71390.peg.2557
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonates Utilization	Alkanesulfonates-binding protein	fig|6666666.71390.peg.1325, <br>fig|6666666.71390.peg.1858, <br>fig|6666666.71390.peg.7686
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonates Utilization	Alkanesulfonates transport system permease protein	fig|6666666.71390.peg.1322, <br>fig|6666666.71390.peg.1323, <br>fig|6666666.71390.peg.1856, <br>fig|6666666.71390.peg.3722, <br>fig|6666666.71390.peg.7192, <br>fig|6666666.71390.peg.7685
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonates Utilization	FMN reductase (EC 1.5.1.29)	fig|6666666.71390.peg.1616
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonates Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.71390.peg.673, <br>fig|6666666.71390.peg.1324, <br>fig|6666666.71390.peg.1857, <br>fig|6666666.71390.peg.3416, <br>fig|6666666.71390.peg.7684
Sulfur Metabolism	Organic sulfur assimilation	Alkanesulfonates Utilization	Alkanesulfonate monooxygenase (EC 1.14.14.5)	fig|6666666.71390.peg.1326, <br>fig|6666666.71390.peg.2557
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.71390.peg.4788, <br>fig|6666666.71390.peg.7320
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.71390.peg.7323
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.71390.peg.7325
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.71390.peg.7324
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Phosphate transport system regulatory protein PhoU	fig|6666666.71390.peg.7328
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.71390.peg.7322
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.71390.peg.2286
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	High affinity phosphate transporter and control of PHO regulon	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.71390.peg.4789
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.71390.peg.6380
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)	fig|6666666.71390.peg.7323
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	fig|6666666.71390.peg.7324
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.71390.peg.3268, <br>fig|6666666.71390.peg.3910, <br>fig|6666666.71390.peg.4757
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate transport system regulatory protein PhoU	fig|6666666.71390.peg.7328
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.71390.peg.4655
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.71390.peg.6381
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.71390.peg.2286
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.71390.peg.261, <br>fig|6666666.71390.peg.261
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	fig|6666666.71390.peg.4789
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.71390.peg.6266
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.71390.peg.4788, <br>fig|6666666.71390.peg.7320
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	fig|6666666.71390.peg.7325
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.71390.peg.7322
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.71390.peg.3137
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Phosphate metabolism	Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)	fig|6666666.71390.peg.2643
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Polyphosphate	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.71390.peg.2710
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.71390.peg.2286
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.71390.peg.3268, <br>fig|6666666.71390.peg.3910, <br>fig|6666666.71390.peg.4757
Phosphorus Metabolism	Phosphorus Metabolism - no subcategory	Polyphosphate	Polyphosphate kinase 2 (EC 2.7.4.1)	fig|6666666.71390.peg.4828
Carbohydrates	Central carbohydrate metabolism	Methylglyoxal Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.71390.peg.3277, <br>fig|6666666.71390.peg.6633
Carbohydrates	Central carbohydrate metabolism	Methylglyoxal Metabolism	Aldehyde dehydrogenase B (EC 1.2.1.22)	fig|6666666.71390.peg.3953
Carbohydrates	Central carbohydrate metabolism	Methylglyoxal Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.71390.peg.2105, <br>fig|6666666.71390.peg.2964, <br>fig|6666666.71390.peg.3443, <br>fig|6666666.71390.peg.3445, <br>fig|6666666.71390.peg.4056, <br>fig|6666666.71390.peg.4195, <br>fig|6666666.71390.peg.4710, <br>fig|6666666.71390.peg.4820, <br>fig|6666666.71390.peg.4829, <br>fig|6666666.71390.peg.5046, <br>fig|6666666.71390.peg.5099, <br>fig|6666666.71390.peg.5326, <br>fig|6666666.71390.peg.6050, <br>fig|6666666.71390.peg.6273, <br>fig|6666666.71390.peg.6362, <br>fig|6666666.71390.peg.6700, <br>fig|6666666.71390.peg.6713, <br>fig|6666666.71390.peg.6745, <br>fig|6666666.71390.peg.7480, <br>fig|6666666.71390.peg.7515, <br>fig|6666666.71390.peg.7540, <br>fig|6666666.71390.peg.2105, <br>fig|6666666.71390.peg.2964, <br>fig|6666666.71390.peg.3443, <br>fig|6666666.71390.peg.3445, <br>fig|6666666.71390.peg.4056, <br>fig|6666666.71390.peg.4195, <br>fig|6666666.71390.peg.4710, <br>fig|6666666.71390.peg.4820, <br>fig|6666666.71390.peg.4829, <br>fig|6666666.71390.peg.5046, <br>fig|6666666.71390.peg.5099, <br>fig|6666666.71390.peg.5326, <br>fig|6666666.71390.peg.6050, <br>fig|6666666.71390.peg.6273, <br>fig|6666666.71390.peg.6362, <br>fig|6666666.71390.peg.6700, <br>fig|6666666.71390.peg.6713, <br>fig|6666666.71390.peg.6745, <br>fig|6666666.71390.peg.7480, <br>fig|6666666.71390.peg.7515, <br>fig|6666666.71390.peg.7540
Carbohydrates	Central carbohydrate metabolism	Methylglyoxal Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.71390.peg.600
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Lactate 2-monooxygenase (EC 1.13.12.4)	fig|6666666.71390.peg.2380
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Pyruvate decarboxylase (EC 4.1.1.1)	fig|6666666.71390.peg.7381
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.71390.peg.2317
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.71390.peg.196, <br>fig|6666666.71390.peg.7245
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Pyruvate oxidase (EC 1.2.3.3)	fig|6666666.71390.peg.3862
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.71390.peg.2105, <br>fig|6666666.71390.peg.2964, <br>fig|6666666.71390.peg.3443, <br>fig|6666666.71390.peg.3445, <br>fig|6666666.71390.peg.4056, <br>fig|6666666.71390.peg.4195, <br>fig|6666666.71390.peg.4710, <br>fig|6666666.71390.peg.4820, <br>fig|6666666.71390.peg.4829, <br>fig|6666666.71390.peg.5046, <br>fig|6666666.71390.peg.5099, <br>fig|6666666.71390.peg.5326, <br>fig|6666666.71390.peg.6050, <br>fig|6666666.71390.peg.6273, <br>fig|6666666.71390.peg.6362, <br>fig|6666666.71390.peg.6700, <br>fig|6666666.71390.peg.6713, <br>fig|6666666.71390.peg.6745, <br>fig|6666666.71390.peg.7480, <br>fig|6666666.71390.peg.7515, <br>fig|6666666.71390.peg.7540
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1)	fig|6666666.71390.peg.7568
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.71390.peg.5001
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)	fig|6666666.71390.peg.3091, <br>fig|6666666.71390.peg.3423
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.71390.peg.6655
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.71390.peg.446, <br>fig|6666666.71390.peg.6977
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Acetyl-coenzyme A synthetase (EC 6.2.1.1)	fig|6666666.71390.peg.3259, <br>fig|6666666.71390.peg.6174, <br>fig|6666666.71390.peg.7509
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Protein acetyltransferase	fig|6666666.71390.peg.1422
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.71390.peg.6946
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.71390.peg.139, <br>fig|6666666.71390.peg.3039
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1)	fig|6666666.71390.peg.7567
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.71390.peg.4913, <br>fig|6666666.71390.peg.6947, <br>fig|6666666.71390.peg.7569
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.71390.peg.5002, <br>fig|6666666.71390.peg.6953
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	D-serine/D-alanine/glycine transporter	fig|6666666.71390.peg.1772
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.71390.peg.1121, <br>fig|6666666.71390.peg.5026
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)	fig|6666666.71390.peg.4017, <br>fig|6666666.71390.peg.6747
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	Valine--pyruvate aminotransferase (EC 2.6.1.66)	fig|6666666.71390.peg.5209
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.71390.peg.4166
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	fig|6666666.71390.peg.244, <br>fig|6666666.71390.peg.2724, <br>fig|6666666.71390.peg.6032
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	Alanine dehydrogenase (EC 1.4.1.1)	fig|6666666.71390.peg.2568
Carbohydrates	Central carbohydrate metabolism	Pyruvate Alanine Serine Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.71390.peg.3530, <br>fig|6666666.71390.peg.7204
Carbohydrates	Central carbohydrate metabolism	Glyoxylate bypass	Malate synthase G (EC 2.3.3.9)	fig|6666666.71390.peg.1717
Carbohydrates	Central carbohydrate metabolism	Glyoxylate bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.71390.peg.7065
Carbohydrates	Central carbohydrate metabolism	Glyoxylate bypass	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.71390.peg.7470, <br>fig|6666666.71390.peg.7474
Carbohydrates	Central carbohydrate metabolism	Glyoxylate bypass	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.71390.peg.4813
Carbohydrates	Central carbohydrate metabolism	Glyoxylate bypass	Isocitrate lyase (EC 4.1.3.1), group III, Mycobacterial type ICL2	fig|6666666.71390.peg.1658
Carbohydrates	Central carbohydrate metabolism	Glyoxylate bypass	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.71390.peg.790, <br>fig|6666666.71390.peg.4609, <br>fig|6666666.71390.peg.7053
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	DHA-specific EI component	fig|6666666.71390.peg.3553
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM	fig|6666666.71390.peg.3553
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	fig|6666666.71390.peg.3551
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	DHA-specific IIA component	fig|6666666.71390.peg.3553
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	fig|6666666.71390.peg.2425, <br>fig|6666666.71390.peg.3552
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit	fig|6666666.71390.peg.2424
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	DHA-specific phosphocarrier protein HPr	fig|6666666.71390.peg.3553
Carbohydrates	Central carbohydrate metabolism	Dihydroxyacetone kinases	Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29)	fig|6666666.71390.peg.946, <br>fig|6666666.71390.peg.5508
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.71390.peg.407, <br>fig|6666666.71390.peg.2257
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.71390.peg.742, <br>fig|6666666.71390.peg.5512
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.71390.peg.3127
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.71390.peg.399, <br>fig|6666666.71390.peg.7251
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.71390.peg.4945
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.71390.peg.7672
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.71390.peg.1851, <br>fig|6666666.71390.peg.4983
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.71390.peg.2710
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.71390.peg.149, <br>fig|6666666.71390.peg.1226, <br>fig|6666666.71390.peg.4790
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.71390.peg.897
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.71390.peg.1649, <br>fig|6666666.71390.peg.7506
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.71390.peg.741
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.71390.peg.3271
Carbohydrates	Central carbohydrate metabolism	Glycolysis and Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.71390.peg.739, <br>fig|6666666.71390.peg.740, <br>fig|6666666.71390.peg.4943
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.71390.peg.1387, <br>fig|6666666.71390.peg.7367
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.71390.peg.392, <br>fig|6666666.71390.peg.755, <br>fig|6666666.71390.peg.6680
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.71390.peg.6678
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Gluconate dehydratase (EC 4.2.1.39)	fig|6666666.71390.peg.57
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Polyphosphate glucokinase (EC 2.7.1.63)	fig|6666666.71390.peg.2710
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.71390.peg.753
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Gluconolactonase (EC 3.1.1.17)	fig|6666666.71390.peg.2459, <br>fig|6666666.71390.peg.4461, <br>fig|6666666.71390.peg.6767
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	fig|6666666.71390.peg.393, <br>fig|6666666.71390.peg.754
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.71390.peg.928
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.71390.peg.149, <br>fig|6666666.71390.peg.1226, <br>fig|6666666.71390.peg.4790
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.71390.peg.897
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.71390.peg.741
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Phosphogluconate dehydratase (EC 4.2.1.12)	fig|6666666.71390.peg.6679
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.71390.peg.739, <br>fig|6666666.71390.peg.740, <br>fig|6666666.71390.peg.4943
Carbohydrates	Central carbohydrate metabolism	Entner-Doudoroff Pathway	Enolase (EC 4.2.1.11)	fig|6666666.71390.peg.3271
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.71390.peg.446, <br>fig|6666666.71390.peg.6977
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	fig|6666666.71390.peg.20, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)	fig|6666666.71390.peg.6948
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1)	fig|6666666.71390.peg.7567
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)	fig|6666666.71390.peg.6949
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.71390.peg.2901
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	fig|6666666.71390.peg.22, <br>fig|6666666.71390.peg.1115, <br>fig|6666666.71390.peg.6976
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein	fig|6666666.71390.peg.4903
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	fig|6666666.71390.peg.21, <br>fig|6666666.71390.peg.2366, <br>fig|6666666.71390.peg.4914
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1)	fig|6666666.71390.peg.7568
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.71390.peg.4913, <br>fig|6666666.71390.peg.6947, <br>fig|6666666.71390.peg.7569
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.7206, <br>fig|6666666.71390.peg.7566
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.71390.peg.2901
Carbohydrates	Central carbohydrate metabolism	Dehydrogenase complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.71390.peg.1118
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.71390.peg.7065
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.71390.peg.3991, <br>fig|6666666.71390.peg.4009, <br>fig|6666666.71390.peg.6790, <br>fig|6666666.71390.peg.7548, <br>fig|6666666.71390.peg.7683
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.3665
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.71390.peg.790, <br>fig|6666666.71390.peg.4609, <br>fig|6666666.71390.peg.7053
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.71390.peg.4010, <br>fig|6666666.71390.peg.6789, <br>fig|6666666.71390.peg.7547
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.71390.peg.7470, <br>fig|6666666.71390.peg.7474
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Malate:quinone oxidoreductase (EC 1.1.5.4)	fig|6666666.71390.peg.2508, <br>fig|6666666.71390.peg.5704
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.3977, <br>fig|6666666.71390.peg.4818, <br>fig|6666666.71390.peg.5523, <br>fig|6666666.71390.peg.7566
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.71390.peg.614
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.71390.peg.3128
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	fig|6666666.71390.peg.4038, <br>fig|6666666.71390.peg.4039
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.71390.peg.6946
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.71390.peg.7690
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.71390.peg.2901
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.71390.peg.2901
Carbohydrates	Central carbohydrate metabolism	TCA Cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.71390.peg.7689
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	D-malic enzyme (EC 1.1.1.83)	fig|6666666.71390.peg.7639
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	Pyruvate carboxyl transferase (EC 6.4.1.1)	fig|6666666.71390.peg.2307
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	fig|6666666.71390.peg.6605
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.71390.peg.744
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.71390.peg.2908
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate	fig|6666666.71390.peg.5178
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.71390.peg.1649, <br>fig|6666666.71390.peg.7506
Carbohydrates	Central carbohydrate metabolism	Pyruvate metabolism I: anaplerotic reactions, PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.71390.peg.897
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Transketolase (EC 2.2.1.1)	fig|6666666.71390.peg.395, <br>fig|6666666.71390.peg.757, <br>fig|6666666.71390.peg.4987
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.71390.peg.4926
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.71390.peg.3288
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.71390.peg.69, <br>fig|6666666.71390.peg.398, <br>fig|6666666.71390.peg.947
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.71390.peg.4925
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.71390.peg.397, <br>fig|6666666.71390.peg.714, <br>fig|6666666.71390.peg.1753, <br>fig|6666666.71390.peg.4986
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.71390.peg.392, <br>fig|6666666.71390.peg.755, <br>fig|6666666.71390.peg.6680
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.71390.peg.377, <br>fig|6666666.71390.peg.1722, <br>fig|6666666.71390.peg.5434
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.71390.peg.753
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)	fig|6666666.71390.peg.1746
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Fructose-6-phosphate phosphoketolase (EC 4.1.2.22)	fig|6666666.71390.peg.1746
Carbohydrates	Central carbohydrate metabolism	Pentose phosphate pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.71390.peg.396, <br>fig|6666666.71390.peg.756, <br>fig|6666666.71390.peg.4908
Carbohydrates	Central carbohydrate metabolism	Glycolate, glyoxylate interconversions	Glyoxylate reductase (EC 1.1.1.26)	fig|6666666.71390.peg.2441, <br>fig|6666666.71390.peg.3535
Carbohydrates	Central carbohydrate metabolism	Glycolate, glyoxylate interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.71390.peg.1083, <br>fig|6666666.71390.peg.7716
Carbohydrates	Central carbohydrate metabolism	Glycolate, glyoxylate interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.71390.peg.2441, <br>fig|6666666.71390.peg.3535
Carbohydrates	Central carbohydrate metabolism	Glycolate, glyoxylate interconversions	Glyoxylate reductase (EC 1.1.1.79)	fig|6666666.71390.peg.2441, <br>fig|6666666.71390.peg.3535
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.71390.peg.3555
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.71390.peg.2216
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	fig|6666666.71390.peg.7227
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family	fig|6666666.71390.peg.4023, <br>fig|6666666.71390.peg.6647, <br>fig|6666666.71390.peg.6664, <br>fig|6666666.71390.peg.7145
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	fig|6666666.71390.peg.86, <br>fig|6666666.71390.peg.4028
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)	fig|6666666.71390.peg.4026
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.71390.peg.3556
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.71390.peg.6723
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.71390.peg.3556
Carbohydrates	Aminosugars	Chitin and N-acetylglucosamine utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.71390.peg.4029
Carbohydrates	Aminosugars	N-Acetyl-Galactosamine and Galactosamine Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.71390.peg.407, <br>fig|6666666.71390.peg.2257
Carbohydrates	Aminosugars	N-Acetyl-Galactosamine and Galactosamine Utilization	Predicted N-acetylgalactosamine kinase, COG2971 (EC 2.7.1.157)	fig|6666666.71390.peg.6451
Carbohydrates	Aminosugars	N-Acetyl-Galactosamine and Galactosamine Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.71390.peg.2805, <br>fig|6666666.71390.peg.4132
Carbohydrates	Aminosugars	N-Acetyl-Galactosamine and Galactosamine Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.71390.peg.6723
Carbohydrates	Aminosugars	N-Acetyl-Galactosamine and Galactosamine Utilization	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)	fig|6666666.71390.peg.6450
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.71390.peg.851
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.71390.peg.1985
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Trehalose phosphorylase (EC 2.4.1.64)	fig|6666666.71390.peg.2801, <br>fig|6666666.71390.peg.4133
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Trehalose-6-phosphate phosphatase (EC 3.1.3.12)	fig|6666666.71390.peg.1650, <br>fig|6666666.71390.peg.6343
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Putative glucanase glgE (EC 3.2.1.-)	fig|6666666.71390.peg.1986
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)	fig|6666666.71390.peg.850
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.71390.peg.852, <br>fig|6666666.71390.peg.5733
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	fig|6666666.71390.peg.5081
Carbohydrates	Di- and oligosaccharides	Trehalose Biosynthesis	Glucoamylase (EC 3.2.1.3)	fig|6666666.71390.peg.219
Carbohydrates	Di- and oligosaccharides	Sucrose utilization	Sucrose-6-phosphate hydrolase (EC 3.2.1.26)	fig|6666666.71390.peg.5123
Carbohydrates	Di- and oligosaccharides	Sucrose utilization	Sucrose permease, major facilitator superfamily	fig|6666666.71390.peg.5122
Carbohydrates	Di- and oligosaccharides	Sucrose utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.71390.peg.375, <br>fig|6666666.71390.peg.7624
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Malto-oligosyltrehalose synthase (EC 5.4.99.15)	fig|6666666.71390.peg.851
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.71390.peg.1684
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.71390.peg.942, <br>fig|6666666.71390.peg.2913
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Neopullulanase (EC 3.2.1.135)	fig|6666666.71390.peg.1784
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.71390.peg.2914
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.71390.peg.550, <br>fig|6666666.71390.peg.1987
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.71390.peg.48
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Maltose phosphorylase (EC 2.4.1.8)	fig|6666666.71390.peg.2801, <br>fig|6666666.71390.peg.4133
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.71390.peg.549
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.71390.peg.2805, <br>fig|6666666.71390.peg.4132
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Multiple sugar ABC transporter, ATP-binding protein	fig|6666666.71390.peg.1194
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.71390.peg.945, <br>fig|6666666.71390.peg.1194
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.71390.peg.943
Carbohydrates	Di- and oligosaccharides	Maltose and Maltodextrin Utilization	Glucoamylase (EC 3.2.1.3)	fig|6666666.71390.peg.219
Carbohydrates	Di- and oligosaccharides	Trehalose Uptake and Utilization	Glucose/mannose:H+ symporter GlcP	fig|6666666.71390.peg.1240, <br>fig|6666666.71390.peg.2803
Carbohydrates	Di- and oligosaccharides	Trehalose Uptake and Utilization	Trehalose phosphorylase (EC 2.4.1.64)	fig|6666666.71390.peg.2801, <br>fig|6666666.71390.peg.4133
Carbohydrates	Di- and oligosaccharides	Trehalose Uptake and Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.71390.peg.2805, <br>fig|6666666.71390.peg.4132
Carbohydrates	Di- and oligosaccharides	Lactose and Galactose Uptake and Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.71390.peg.660, <br>fig|6666666.71390.peg.4672, <br>fig|6666666.71390.peg.4751, <br>fig|6666666.71390.peg.4778, <br>fig|6666666.71390.peg.6225
Carbohydrates	Di- and oligosaccharides	Lactose and Galactose Uptake and Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.71390.peg.6453
Carbohydrates	Di- and oligosaccharides	Lactose and Galactose Uptake and Utilization	Tagatose-6-phosphate kinase (EC 2.7.1.144)	fig|6666666.71390.peg.1653, <br>fig|6666666.71390.peg.1654, <br>fig|6666666.71390.peg.6449
Carbohydrates	Di- and oligosaccharides	Lactose and Galactose Uptake and Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.71390.peg.3974
Carbohydrates	Di- and oligosaccharides	Lactose and Galactose Uptake and Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.71390.peg.1666
Carbohydrates	Di- and oligosaccharides	Lactose and Galactose Uptake and Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.71390.peg.1665
Carbohydrates	Di- and oligosaccharides	Lactose and Galactose Uptake and Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.71390.peg.549
Carbohydrates	Di- and oligosaccharides	Lactose utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.71390.peg.3974
Carbohydrates	Di- and oligosaccharides	Lactose utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.71390.peg.2212
Carbohydrates	One-carbon Metabolism	Formaldehyde assimilation: Ribulose monophosphate pathway	6-phospho-3-hexuloisomerase	fig|6666666.71390.peg.390, <br>fig|6666666.71390.peg.410, <br>fig|6666666.71390.peg.7365
Carbohydrates	One-carbon Metabolism	Formaldehyde assimilation: Ribulose monophosphate pathway	D-arabino-3-hexulose 6-phosphate formaldehyde lyase	fig|6666666.71390.peg.391, <br>fig|6666666.71390.peg.7366
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.71390.peg.7065
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.71390.peg.3139, <br>fig|6666666.71390.peg.3140, <br>fig|6666666.71390.peg.3519, <br>fig|6666666.71390.peg.7203
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)	fig|6666666.71390.peg.805
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	fig|6666666.71390.peg.3805, <br>fig|6666666.71390.peg.6913
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.71390.peg.3991, <br>fig|6666666.71390.peg.4009, <br>fig|6666666.71390.peg.6790, <br>fig|6666666.71390.peg.7548, <br>fig|6666666.71390.peg.7683
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.71390.peg.790, <br>fig|6666666.71390.peg.4609, <br>fig|6666666.71390.peg.7053
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.71390.peg.4010, <br>fig|6666666.71390.peg.6789, <br>fig|6666666.71390.peg.7547
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Citrate synthase (si) (EC 2.3.3.1)	fig|6666666.71390.peg.7470, <br>fig|6666666.71390.peg.7474
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	fig|6666666.71390.peg.3806, <br>fig|6666666.71390.peg.6912
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	fig|6666666.71390.peg.440, <br>fig|6666666.71390.peg.3432, <br>fig|6666666.71390.peg.5835
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.71390.peg.806, <br>fig|6666666.71390.peg.2021
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.71390.peg.4049
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Enolase (EC 4.2.1.11)	fig|6666666.71390.peg.3271
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	decarboxylase	fig|6666666.71390.peg.4265, <br>fig|6666666.71390.peg.4266
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	fig|6666666.71390.peg.15, <br>fig|6666666.71390.peg.3359, <br>fig|6666666.71390.peg.3875
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.71390.peg.3335
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	fig|6666666.71390.peg.16, <br>fig|6666666.71390.peg.3360
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.71390.peg.4049
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.3808, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.71390.peg.7690
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Isocitrate lyase (EC 4.1.3.1)	fig|6666666.71390.peg.4813
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	3-ketoacyl-CoA thiolase (EC 2.3.1.16)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.2549, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3185, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	low-specificity D-threonine aldolase	fig|6666666.71390.peg.1386
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.71390.peg.7689
Carbohydrates	One-carbon Metabolism	Serine-glyoxylate cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440
Carbohydrates	One-carbon Metabolism	One-carbon metabolism by tetrahydropterines	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.71390.peg.3478, <br>fig|6666666.71390.peg.3516
Carbohydrates	One-carbon Metabolism	One-carbon metabolism by tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.71390.peg.3335
Carbohydrates	One-carbon Metabolism	One-carbon metabolism by tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.71390.peg.4049
Carbohydrates	One-carbon Metabolism	One-carbon metabolism by tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.71390.peg.4049
Carbohydrates	One-carbon Metabolism	Methanogenesis	F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase (EC 1.5.99.11)	fig|6666666.71390.peg.2039, <br>fig|6666666.71390.peg.2355
Carbohydrates	Organic acids	Methylcitrate cycle	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.71390.peg.36, <br>fig|6666666.71390.peg.4813
Carbohydrates	Organic acids	Methylcitrate cycle	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.71390.peg.35
Carbohydrates	Organic acids	Methylcitrate cycle	2-methylaconitate isomerase	fig|6666666.71390.peg.7634
Carbohydrates	Organic acids	Methylcitrate cycle	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.71390.peg.790
Carbohydrates	Organic acids	Methylcitrate cycle	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.71390.peg.37
Carbohydrates	Organic acids	Propionate-CoA to Succinate Module	Methylisocitrate lyase (EC 4.1.3.30)	fig|6666666.71390.peg.36, <br>fig|6666666.71390.peg.4813
Carbohydrates	Organic acids	Propionate-CoA to Succinate Module	2-methylcitrate dehydratase (EC 4.2.1.79)	fig|6666666.71390.peg.35
Carbohydrates	Organic acids	Propionate-CoA to Succinate Module	2-methylaconitate isomerase	fig|6666666.71390.peg.7634
Carbohydrates	Organic acids	Propionate-CoA to Succinate Module	2-methylisocitrate dehydratase (EC 4.2.1.99)	fig|6666666.71390.peg.790
Carbohydrates	Organic acids	Propionate-CoA to Succinate Module	2-methylcitrate synthase (EC 2.3.3.5)	fig|6666666.71390.peg.37
Carbohydrates	Organic acids	Propionate-CoA to Succinate Module	Aconitate hydratase (EC 4.2.1.3)	fig|6666666.71390.peg.790, <br>fig|6666666.71390.peg.4609, <br>fig|6666666.71390.peg.7053
Carbohydrates	Organic acids	Glycerate metabolism	Hydroxypyruvate isomerase (EC 5.3.1.22)	fig|6666666.71390.peg.105, <br>fig|6666666.71390.peg.987, <br>fig|6666666.71390.peg.5010
Carbohydrates	Organic acids	Glycerate metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.71390.peg.2441, <br>fig|6666666.71390.peg.3535
Carbohydrates	Organic acids	Glycerate metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.71390.peg.988, <br>fig|6666666.71390.peg.2086, <br>fig|6666666.71390.peg.2087, <br>fig|6666666.71390.peg.4902
Carbohydrates	Organic acids	Glycerate metabolism	Glyoxylate carboligase (EC 4.1.1.47)	fig|6666666.71390.peg.989
Carbohydrates	Organic acids	Glycerate metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.71390.peg.897
Carbohydrates	Organic acids	Glycerate metabolism	Tartrate decarboxylase (EC 4.1.1.73)	fig|6666666.71390.peg.7639
Carbohydrates	Organic acids	Glycerate metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440
Carbohydrates	Organic acids	Lactate utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.71390.peg.7077
Carbohydrates	Organic acids	Lactate utilization	Lactate-responsive regulator LldR in Enterobacteria, GntR family	fig|6666666.71390.peg.2588
Carbohydrates	Organic acids	Lactate utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	fig|6666666.71390.peg.7076
Carbohydrates	Organic acids	Lactate utilization	Lactate-responsive regulator LldR in Actinobacteria, GntR family	fig|6666666.71390.peg.1352, <br>fig|6666666.71390.peg.3057, <br>fig|6666666.71390.peg.6840, <br>fig|6666666.71390.peg.7079
Carbohydrates	Organic acids	Lactate utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.71390.peg.7078
Carbohydrates	Organic acids	Lactate utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.71390.peg.6115
Carbohydrates	Fermentation	Butanol Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.71390.peg.279, <br>fig|6666666.71390.peg.1742, <br>fig|6666666.71390.peg.1756, <br>fig|6666666.71390.peg.1928, <br>fig|6666666.71390.peg.2196, <br>fig|6666666.71390.peg.2428, <br>fig|6666666.71390.peg.3181, <br>fig|6666666.71390.peg.3245, <br>fig|6666666.71390.peg.3374, <br>fig|6666666.71390.peg.3595, <br>fig|6666666.71390.peg.3628, <br>fig|6666666.71390.peg.3648, <br>fig|6666666.71390.peg.3667, <br>fig|6666666.71390.peg.3668, <br>fig|6666666.71390.peg.4711, <br>fig|6666666.71390.peg.5053, <br>fig|6666666.71390.peg.6104, <br>fig|6666666.71390.peg.6107, <br>fig|6666666.71390.peg.6384, <br>fig|6666666.71390.peg.6419, <br>fig|6666666.71390.peg.6513, <br>fig|6666666.71390.peg.6655, <br>fig|6666666.71390.peg.6891, <br>fig|6666666.71390.peg.6919, <br>fig|6666666.71390.peg.6983
Carbohydrates	Fermentation	Butanol Biosynthesis	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.71390.peg.23, <br>fig|6666666.71390.peg.142, <br>fig|6666666.71390.peg.786, <br>fig|6666666.71390.peg.1096, <br>fig|6666666.71390.peg.1408, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.1791, <br>fig|6666666.71390.peg.2029, <br>fig|6666666.71390.peg.2058, <br>fig|6666666.71390.peg.2207, <br>fig|6666666.71390.peg.3048, <br>fig|6666666.71390.peg.3055, <br>fig|6666666.71390.peg.3453, <br>fig|6666666.71390.peg.3455, <br>fig|6666666.71390.peg.3458, <br>fig|6666666.71390.peg.3461, <br>fig|6666666.71390.peg.3462, <br>fig|6666666.71390.peg.3463, <br>fig|6666666.71390.peg.3812, <br>fig|6666666.71390.peg.4151, <br>fig|6666666.71390.peg.4379, <br>fig|6666666.71390.peg.4823, <br>fig|6666666.71390.peg.5076, <br>fig|6666666.71390.peg.5102, <br>fig|6666666.71390.peg.5625, <br>fig|6666666.71390.peg.5695, <br>fig|6666666.71390.peg.5734, <br>fig|6666666.71390.peg.6551, <br>fig|6666666.71390.peg.6698, <br>fig|6666666.71390.peg.6853, <br>fig|6666666.71390.peg.6960, <br>fig|6666666.71390.peg.6961, <br>fig|6666666.71390.peg.7243, <br>fig|6666666.71390.peg.7526, <br>fig|6666666.71390.peg.7667, <br>fig|6666666.71390.peg.7680
Carbohydrates	Fermentation	Butanol Biosynthesis	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.71390.peg.1416, <br>fig|6666666.71390.peg.3782, <br>fig|6666666.71390.peg.6892
Carbohydrates	Fermentation	Butanol Biosynthesis	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.71390.peg.6655
Carbohydrates	Fermentation	Butanol Biosynthesis	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509
Carbohydrates	Fermentation	Butanol Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.3808, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Carbohydrates	Fermentation	Fermentations: Mixed acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.71390.peg.279, <br>fig|6666666.71390.peg.1742, <br>fig|6666666.71390.peg.1756, <br>fig|6666666.71390.peg.1928, <br>fig|6666666.71390.peg.2196, <br>fig|6666666.71390.peg.2428, <br>fig|6666666.71390.peg.3181, <br>fig|6666666.71390.peg.3245, <br>fig|6666666.71390.peg.3374, <br>fig|6666666.71390.peg.3595, <br>fig|6666666.71390.peg.3628, <br>fig|6666666.71390.peg.3648, <br>fig|6666666.71390.peg.3667, <br>fig|6666666.71390.peg.3668, <br>fig|6666666.71390.peg.4711, <br>fig|6666666.71390.peg.5053, <br>fig|6666666.71390.peg.6104, <br>fig|6666666.71390.peg.6107, <br>fig|6666666.71390.peg.6384, <br>fig|6666666.71390.peg.6419, <br>fig|6666666.71390.peg.6513, <br>fig|6666666.71390.peg.6655, <br>fig|6666666.71390.peg.6891, <br>fig|6666666.71390.peg.6919, <br>fig|6666666.71390.peg.6983
Carbohydrates	Fermentation	Fermentations: Mixed acid	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.71390.peg.6655
Carbohydrates	Fermentation	Fermentations: Mixed acid	Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	fig|6666666.71390.peg.744
Carbohydrates	Fermentation	Fermentations: Mixed acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.71390.peg.5002, <br>fig|6666666.71390.peg.6953
Carbohydrates	Fermentation	Fermentations: Mixed acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.71390.peg.5001
Carbohydrates	Fermentation	Acetolactate synthase subunits	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.71390.peg.2267
Carbohydrates	Fermentation	Acetolactate synthase subunits	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.71390.peg.2268
Carbohydrates	Fermentation	Fermentations: Lactate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.71390.peg.6655
Carbohydrates	Fermentation	Fermentations: Lactate	Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)	fig|6666666.71390.peg.1746
Carbohydrates	Fermentation	Fermentations: Lactate	Fructose-6-phosphate phosphoketolase (EC 4.1.2.22)	fig|6666666.71390.peg.1746
Carbohydrates	Fermentation	Fermentations: Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.71390.peg.5002, <br>fig|6666666.71390.peg.6953
Carbohydrates	Fermentation	Fermentations: Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.71390.peg.5001
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.7409
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.71390.peg.2540, <br>fig|6666666.71390.peg.6885, <br>fig|6666666.71390.peg.6896
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.71390.peg.2232
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.71390.peg.637, <br>fig|6666666.71390.peg.1982, <br>fig|6666666.71390.peg.2071, <br>fig|6666666.71390.peg.3056, <br>fig|6666666.71390.peg.3166, <br>fig|6666666.71390.peg.3457, <br>fig|6666666.71390.peg.3473, <br>fig|6666666.71390.peg.3808, <br>fig|6666666.71390.peg.6738, <br>fig|6666666.71390.peg.6914
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	Enoyl-CoA hydratase (EC 4.2.1.17)	fig|6666666.71390.peg.23, <br>fig|6666666.71390.peg.142, <br>fig|6666666.71390.peg.786, <br>fig|6666666.71390.peg.1096, <br>fig|6666666.71390.peg.1408, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.1791, <br>fig|6666666.71390.peg.2029, <br>fig|6666666.71390.peg.2058, <br>fig|6666666.71390.peg.2207, <br>fig|6666666.71390.peg.3048, <br>fig|6666666.71390.peg.3055, <br>fig|6666666.71390.peg.3453, <br>fig|6666666.71390.peg.3455, <br>fig|6666666.71390.peg.3458, <br>fig|6666666.71390.peg.3461, <br>fig|6666666.71390.peg.3462, <br>fig|6666666.71390.peg.3463, <br>fig|6666666.71390.peg.3812, <br>fig|6666666.71390.peg.4151, <br>fig|6666666.71390.peg.4379, <br>fig|6666666.71390.peg.4823, <br>fig|6666666.71390.peg.5076, <br>fig|6666666.71390.peg.5102, <br>fig|6666666.71390.peg.5625, <br>fig|6666666.71390.peg.5695, <br>fig|6666666.71390.peg.5734, <br>fig|6666666.71390.peg.6551, <br>fig|6666666.71390.peg.6698, <br>fig|6666666.71390.peg.6853, <br>fig|6666666.71390.peg.6960, <br>fig|6666666.71390.peg.6961, <br>fig|6666666.71390.peg.7243, <br>fig|6666666.71390.peg.7526, <br>fig|6666666.71390.peg.7667, <br>fig|6666666.71390.peg.7680
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.71390.peg.2231
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.71390.peg.1416, <br>fig|6666666.71390.peg.3782, <br>fig|6666666.71390.peg.6892
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.71390.peg.239, <br>fig|6666666.71390.peg.240, <br>fig|6666666.71390.peg.1417, <br>fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509, <br>fig|6666666.71390.peg.7409
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.71390.peg.4112, <br>fig|6666666.71390.peg.4812, <br>fig|6666666.71390.peg.5509
Carbohydrates	Fermentation	Acetyl-CoA fermentation to Butyrate	Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)	fig|6666666.71390.peg.6890
Carbohydrates	Fermentation	Acetoin, butanediol metabolism	2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)	fig|6666666.71390.peg.2655
Carbohydrates	Fermentation	Acetoin, butanediol metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.71390.peg.2267
Carbohydrates	Fermentation	Acetoin, butanediol metabolism	Acetolactate synthase small subunit (EC 2.2.1.6)	fig|6666666.71390.peg.2268
Carbohydrates	Fermentation	Acetoin, butanediol metabolism	Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)	fig|6666666.71390.peg.6948
Carbohydrates	Fermentation	Acetoin, butanediol metabolism	Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)	fig|6666666.71390.peg.6949
Carbohydrates	Fermentation	Acetoin, butanediol metabolism	2,3-butanediol dehydrogenase, S-alcohol forming, (S)-acetoin-specific (EC 1.1.1.76)	fig|6666666.71390.peg.2861
Carbohydrates	CO2 fixation	CO2 uptake, carboxysome	Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39)	fig|6666666.71390.peg.4981
Carbohydrates	CO2 fixation	CO2 uptake, carboxysome	probable RuBisCo-expression protein CbbX	fig|6666666.71390.peg.4980
Carbohydrates	CO2 fixation	CO2 uptake, carboxysome	Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39)	fig|6666666.71390.peg.4982
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Malate synthase G (EC 2.3.3.9)	fig|6666666.71390.peg.1717
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.71390.peg.2441, <br>fig|6666666.71390.peg.3535
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.71390.peg.988, <br>fig|6666666.71390.peg.2086, <br>fig|6666666.71390.peg.2087, <br>fig|6666666.71390.peg.4902
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.71390.peg.3139, <br>fig|6666666.71390.peg.3140, <br>fig|6666666.71390.peg.3519, <br>fig|6666666.71390.peg.7203
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Glyoxylate carboligase (EC 4.1.1.47)	fig|6666666.71390.peg.989
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39)	fig|6666666.71390.peg.4981
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.71390.peg.1083, <br>fig|6666666.71390.peg.7716
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Glycine cleavage system H protein	fig|6666666.71390.peg.1710, <br>fig|6666666.71390.peg.7202
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39)	fig|6666666.71390.peg.4982
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.71390.peg.1715, <br>fig|6666666.71390.peg.7200
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Catalase (EC 1.11.1.6)	fig|6666666.71390.peg.705, <br>fig|6666666.71390.peg.974, <br>fig|6666666.71390.peg.3322, <br>fig|6666666.71390.peg.5850, <br>fig|6666666.71390.peg.6645, <br>fig|6666666.71390.peg.7231
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.71390.peg.3977, <br>fig|6666666.71390.peg.4818, <br>fig|6666666.71390.peg.5523, <br>fig|6666666.71390.peg.7566
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.71390.peg.1120, <br>fig|6666666.71390.peg.7201
Carbohydrates	CO2 fixation	Photorespiration (oxidative C2 cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.71390.peg.6454, <br>fig|6666666.71390.peg.7627
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.71390.peg.5799, <br>fig|6666666.71390.peg.6319
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol-3-phosphate transporter	fig|6666666.71390.peg.5181, <br>fig|6666666.71390.peg.5969, <br>fig|6666666.71390.peg.6952
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.71390.peg.437, <br>fig|6666666.71390.peg.3976
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.71390.peg.2288, <br>fig|6666666.71390.peg.4589
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3)	fig|6666666.71390.peg.6455, <br>fig|6666666.71390.peg.7228, <br>fig|6666666.71390.peg.7628
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.71390.peg.6120, <br>fig|6666666.71390.peg.6359
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)	fig|6666666.71390.peg.944, <br>fig|6666666.71390.peg.2911, <br>fig|6666666.71390.peg.6457, <br>fig|6666666.71390.peg.7058, <br>fig|6666666.71390.peg.7630
Carbohydrates	Sugar alcohols	Glycerol and Glycerol-3-phosphate Uptake and Utilization	Glycerol uptake facilitator protein	fig|6666666.71390.peg.3550
Carbohydrates	Sugar alcohols	Glycerol fermentation to 1,3-propanediol	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	fig|6666666.71390.peg.484
Carbohydrates	Sugar alcohols	Glycerol fermentation to 1,3-propanediol	Glycerol uptake facilitator protein	fig|6666666.71390.peg.3550
Carbohydrates	Sugar alcohols	Inositol catabolism	Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	fig|6666666.71390.peg.114
Carbohydrates	Sugar alcohols	Inositol catabolism	Inositol transport system sugar-binding protein	fig|6666666.71390.peg.99, <br>fig|6666666.71390.peg.1759, <br>fig|6666666.71390.peg.1760, <br>fig|6666666.71390.peg.6583
Carbohydrates	Sugar alcohols	Inositol catabolism	Inositol transport system permease protein	fig|6666666.71390.peg.100, <br>fig|6666666.71390.peg.305, <br>fig|6666666.71390.peg.1758, <br>fig|6666666.71390.peg.2912, <br>fig|6666666.71390.peg.7544
Carbohydrates	Sugar alcohols	Inositol catabolism	Inositol transport system ATP-binding protein	fig|6666666.71390.peg.101, <br>fig|6666666.71390.peg.1757
Carbohydrates	Sugar alcohols	Inositol catabolism	Major myo-inositol transporter IolT	fig|6666666.71390.peg.7010
Carbohydrates	Sugar alcohols	Inositol catabolism	Predicted transcriptional regulator of the myo-inositol catabolic operon	fig|6666666.71390.peg.7009
Carbohydrates	Sugar alcohols	Inositol catabolism	5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [form 2] (EC 4.1.2.29)	fig|6666666.71390.peg.96
Carbohydrates	Sugar alcohols	Inositol catabolism	Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1)	fig|6666666.71390.peg.6584, <br>fig|6666666.71390.peg.7012
Carbohydrates	Sugar alcohols	Inositol catabolism	Inosose dehydratase (EC 4.2.1.44)	fig|6666666.71390.peg.93, <br>fig|6666666.71390.peg.113
Carbohydrates	Sugar alcohols	Inositol catabolism	Myo-inositol 2-dehydrogenase (EC 1.1.1.18)	fig|6666666.71390.peg.92, <br>fig|6666666.71390.peg.106, <br>fig|6666666.71390.peg.6581, <br>fig|6666666.71390.peg.7011
Carbohydrates	Sugar alcohols	Inositol catabolism	5-deoxy-glucuronate isomerase (EC 5.3.1.-)	fig|6666666.71390.peg.95
Carbohydrates	Sugar alcohols	Inositol catabolism	5-keto-2-deoxygluconokinase (EC 2.7.1.92)	fig|6666666.71390.peg.97
Carbohydrates	Sugar alcohols	Inositol catabolism	Epi-inositol hydrolase (EC 3.7.1.-)	fig|6666666.71390.peg.94
Carbohydrates	Polysaccharides	Glycogen metabolism	Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	fig|6666666.71390.peg.2938
Carbohydrates	Polysaccharides	Glycogen metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.71390.peg.2937
Carbohydrates	Polysaccharides	Glycogen metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.71390.peg.1684
Carbohydrates	Polysaccharides	Glycogen metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.71390.peg.1985
Carbohydrates	Polysaccharides	Glycogen metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.71390.peg.550, <br>fig|6666666.71390.peg.1987
Carbohydrates	Polysaccharides	Glycogen metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.71390.peg.852, <br>fig|6666666.71390.peg.5733
Carbohydrates	Polysaccharides	Glycogen metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.71390.peg.2229
Carbohydrates	Polysaccharides	Alpha-Amylase locus in Streptocococcus	putative esterase	fig|6666666.71390.peg.1948
Carbohydrates	Polysaccharides	Alpha-Amylase locus in Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.71390.peg.2914
Carbohydrates	Monosaccharides	Mannose Metabolism	Alpha-mannosidase (EC 3.2.1.24)	fig|6666666.71390.peg.4398
Carbohydrates	Monosaccharides	Mannose Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.71390.peg.3849, <br>fig|6666666.71390.peg.3988
Carbohydrates	Monosaccharides	Mannose Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.71390.peg.3847
Carbohydrates	Monosaccharides	Mannose Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.71390.peg.1844
Carbohydrates	Monosaccharides	Deoxyribose and Deoxynucleoside Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.71390.peg.3983, <br>fig|6666666.71390.peg.6930
Carbohydrates	Monosaccharides	Deoxyribose and Deoxynucleoside Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.71390.peg.143
Carbohydrates	Monosaccharides	Deoxyribose and Deoxynucleoside Catabolism	Thymidine phosphorylase (EC 2.4.2.4)	fig|6666666.71390.peg.4004
Carbohydrates	Monosaccharides	Deoxyribose and Deoxynucleoside Catabolism	Deoxyribonucleoside regulator DeoR (transcriptional repressor)	fig|6666666.71390.peg.7626
Carbohydrates	Monosaccharides	Deoxyribose and Deoxynucleoside Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.71390.peg.4802
Carbohydrates	Monosaccharides	D-gluconate and ketogluconates metabolism	Gluconate dehydratase (EC 4.2.1.39)	fig|6666666.71390.peg.57
Carbohydrates	Monosaccharides	D-gluconate and ketogluconates metabolism	Gluconate transporter family protein	fig|6666666.71390.peg.929
Carbohydrates	Monosaccharides	D-gluconate and ketogluconates metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.71390.peg.377, <br>fig|6666666.71390.peg.1722, <br>fig|6666666.71390.peg.5434
Carbohydrates	Monosaccharides	D-gluconate and ketogluconates metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.71390.peg.1387, <br>fig|6666666.71390.peg.7367
Carbohydrates	Monosaccharides	D-gluconate and ketogluconates metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.71390.peg.928
Carbohydrates	Monosaccharides	D-gluconate and ketogluconates metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.71390.peg.1383
Carbohydrates	Monosaccharides	D-gluconate and ketogluconates metabolism	Gluconate permease	fig|6666666.71390.peg.7052
Carbohydrates	Monosaccharides	Fructose utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.71390.peg.5252
Carbohydrates	Monosaccharides	Fructose utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.71390.peg.5248
Carbohydrates	Monosaccharides	Fructose utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.71390.peg.5251
Carbohydrates	Monosaccharides	Fructose utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.71390.peg.5251
Carbohydrates	Monosaccharides	Fructose utilization	Fructose ABC transporter, ATP-binding component FrcA	fig|6666666.71390.peg.5518
Carbohydrates	Monosaccharides	Fructose utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.71390.peg.5251
Carbohydrates	Monosaccharides	Fructose utilization	Transcriptional repressor of the fructose operon, DeoR family	fig|6666666.71390.peg.5249
Carbohydrates	Monosaccharides	Fructose utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.71390.peg.396, <br>fig|6666666.71390.peg.756, <br>fig|6666666.71390.peg.4908
Carbohydrates	Monosaccharides	Fructose utilization	Fructose ABC transporter, substrate-binding component FrcB	fig|6666666.71390.peg.5516
Carbohydrates	Monosaccharides	Fructose utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.71390.peg.1653, <br>fig|6666666.71390.peg.1654, <br>fig|6666666.71390.peg.5250, <br>fig|6666666.71390.peg.6449
Carbohydrates	Monosaccharides	Fructose utilization	Fructose ABC transporter, permease component FrcC	fig|6666666.71390.peg.5517
Carbohydrates	Monosaccharides	Fructose utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.71390.peg.375, <br>fig|6666666.71390.peg.7624
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	mandelate racemase family protein Pfl_3283	fig|6666666.71390.peg.6244
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	Predicted D-glucarate or D-galactorate regulator, IclR family	fig|6666666.71390.peg.6262
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.71390.peg.988, <br>fig|6666666.71390.peg.2086, <br>fig|6666666.71390.peg.2087, <br>fig|6666666.71390.peg.4902
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	Glucarate dehydratase (EC 4.2.1.40)	fig|6666666.71390.peg.6263
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	Sugar diacid utilization regulator SdaR	fig|6666666.71390.peg.2727
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)	fig|6666666.71390.peg.6243
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism - gjo	Predicted D-glucarate or D-galactorate regulator, GntR family	fig|6666666.71390.peg.6417
Carbohydrates	Monosaccharides	D-galactonate catabolism	2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)	fig|6666666.71390.peg.6178
Carbohydrates	Monosaccharides	D-galactonate catabolism	2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)	fig|6666666.71390.peg.6179
Carbohydrates	Monosaccharides	D-galactonate catabolism	D-galactonate transporter	fig|6666666.71390.peg.2446, <br>fig|6666666.71390.peg.3745, <br>fig|6666666.71390.peg.6176
Carbohydrates	Monosaccharides	D-galactonate catabolism	D-galactonate regulator, IclR family	fig|6666666.71390.peg.6180
Carbohydrates	Monosaccharides	D-galactonate catabolism	Galactonate dehydratase (EC 4.2.1.6)	fig|6666666.71390.peg.6177
Carbohydrates	Monosaccharides	D-ribose utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.71390.peg.6886
Carbohydrates	Monosaccharides	D-ribose utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.71390.peg.2418, <br>fig|6666666.71390.peg.6888, <br>fig|6666666.71390.peg.7543
Carbohydrates	Monosaccharides	D-ribose utilization	Ribose operon repressor	fig|6666666.71390.peg.5855
Carbohydrates	Monosaccharides	D-ribose utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.71390.peg.2419
Carbohydrates	Monosaccharides	D-ribose utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.71390.peg.143
Carbohydrates	Monosaccharides	D-ribose utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.71390.peg.69, <br>fig|6666666.71390.peg.398, <br>fig|6666666.71390.peg.947
Carbohydrates	Monosaccharides	Xylose utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.71390.peg.767, <br>fig|6666666.71390.peg.933, <br>fig|6666666.71390.peg.1752, <br>fig|6666666.71390.peg.2442
Carbohydrates	Monosaccharides	Xylose utilization	Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)	fig|6666666.71390.peg.6242, <br>fig|6666666.71390.peg.6768
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism	Predicted D-glucarate or D-galactorate regulator, IclR family	fig|6666666.71390.peg.6262
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.71390.peg.988, <br>fig|6666666.71390.peg.2086, <br>fig|6666666.71390.peg.2087, <br>fig|6666666.71390.peg.4902
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism	Glucarate dehydratase (EC 4.2.1.40)	fig|6666666.71390.peg.6263
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism	5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)	fig|6666666.71390.peg.6243
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism	Sugar diacid utilization regulator SdaR	fig|6666666.71390.peg.2727
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism	Predicted D-glucarate or D-galactorate regulator, GntR family	fig|6666666.71390.peg.6417
Carbohydrates	Monosaccharides	D-galactarate, D-glucarate and D-glycerate catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.71390.peg.990, <br>fig|6666666.71390.peg.2440