16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.174098.peg.1360
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.174098.peg.1361
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.174098.peg.869
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.174098.peg.1362
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.174098.peg.336
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.174098.peg.1694
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.174098.peg.773
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.174098.peg.2008
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.174098.peg.1150
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.174098.peg.629
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.174098.peg.630
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.174098.peg.1598
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.174098.peg.1594
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.174098.peg.807
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.174098.peg.865
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.174098.peg.1663
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.174098.peg.36
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.174098.peg.488
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.174098.peg.174
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.174098.peg.1303
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.151
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.179
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.335
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.953
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.1218
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.1247
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.1530
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.1664
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.174098.peg.1756
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.174098.peg.366
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.174098.peg.1013
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.174098.peg.1973
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.174098.peg.256
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.174098.peg.186
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.174098.peg.777
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.174098.peg.776
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.174098.peg.777
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.174098.peg.763
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.174098.peg.772
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.174098.peg.773
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.174098.peg.775
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.174098.peg.1176
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.174098.peg.774
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.174098.peg.1175
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.174098.peg.1433
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.894
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.1370
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.174098.peg.1433
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.174098.peg.520
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.174098.peg.521
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.174098.peg.522
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.174098.peg.523
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.174098.peg.524
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.174098.peg.517
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.174098.peg.518
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.174098.peg.795
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.174098.peg.659
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.174098.peg.1648
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.174098.peg.1209
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.174098.peg.886
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1699
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1702
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.174098.peg.727
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.174098.peg.1055
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.174098.peg.773
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1168
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1794
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.174098.peg.1168
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.174098.peg.1794
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1168
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1794
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.174098.peg.919
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.174098.peg.919
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.174098.peg.244
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.174098.peg.919
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.174098.peg.676
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.174098.peg.243
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.174098.peg.674
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.174098.peg.563
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.174098.peg.1269
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.174098.peg.1270
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.174098.peg.1432
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.174098.peg.396
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.174098.peg.1351
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.174098.peg.41
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.174098.peg.1360
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.174098.peg.478
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.174098.peg.1361
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.174098.peg.1352
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.174098.peg.1356
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.174098.peg.561
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.174098.peg.1350
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.174098.peg.45
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.174098.peg.1184
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.174098.peg.242
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.174098.peg.684
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.174098.peg.142
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.174098.peg.866
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.174098.peg.867
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.174098.peg.868
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.174098.peg.1285
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.174098.peg.993
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.174098.peg.251
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.174098.peg.1362
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.174098.peg.396
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.174098.peg.1351
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.174098.peg.1360
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.174098.peg.478
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.174098.peg.1361
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.174098.peg.1352
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.174098.peg.1356
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.174098.peg.1350
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.174098.peg.242
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.174098.peg.241
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.174098.peg.866
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.174098.peg.867
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.174098.peg.868
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.174098.peg.870
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.174098.peg.1285
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.174098.peg.993
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.174098.peg.242
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.174098.peg.241
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.174098.peg.478
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.174098.peg.1047
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.174098.peg.2015
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.174098.peg.1183
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.174098.peg.2030
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.174098.peg.1174
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.174098.peg.383
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.174098.peg.1051
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.174098.peg.869
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.174098.peg.866
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.174098.peg.867
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.174098.peg.868
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.174098.peg.870
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.174098.peg.1285
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.174098.peg.993
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.174098.peg.526
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.174098.peg.526
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.174098.peg.792
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.174098.peg.251
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.174098.peg.806
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.174098.peg.400
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.174098.peg.740
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.174098.peg.1678
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.174098.peg.1381
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.174098.peg.204
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.174098.peg.203
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.174098.peg.457
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.174098.peg.456
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.174098.peg.93
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.174098.peg.500
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.174098.peg.1949
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.174098.peg.840
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.174098.peg.1757
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.174098.peg.740
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.174098.peg.1678
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.174098.peg.204
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.174098.peg.203
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.174098.peg.457
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.174098.peg.456
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.174098.peg.93
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.174098.peg.258
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.174098.peg.1949
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.174098.peg.740
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.174098.peg.1678
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.174098.peg.1381
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.174098.peg.204
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.174098.peg.203
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.174098.peg.457
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.174098.peg.456
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.174098.peg.93
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.174098.peg.500
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.174098.peg.258
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.174098.peg.1949
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.174098.peg.840
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.174098.peg.1757
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.174098.peg.789
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.174098.peg.1025
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.174098.peg.346
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.174098.peg.347
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.174098.peg.558
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.174098.peg.1162
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.174098.peg.1609
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.174098.peg.1608
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.174098.peg.888
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.174098.peg.995
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.174098.peg.482
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.174098.peg.1158
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.174098.peg.483
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.174098.peg.484
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.174098.peg.676
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.174098.peg.640
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.174098.peg.916
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.174098.peg.1444
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.174098.peg.1659
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.174098.peg.1659
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.174098.peg.557
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.174098.peg.980
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.174098.peg.1430
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.174098.peg.1973
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.174098.peg.256
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.174098.peg.223
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.174098.peg.645
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.174098.peg.646
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.174098.peg.647
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.174098.peg.271
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.174098.peg.1528
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.174098.peg.1527
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.174098.peg.1526
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.174098.peg.699
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.174098.peg.778
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.174098.peg.378
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.174098.peg.645
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.174098.peg.1559
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.174098.peg.645
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.174098.peg.1559
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.174098.peg.141
CBSS-296591.1.peg.2330	NAD-dependent epimerase/dehydratase family protein	fig|6666666.174098.peg.1836
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.174098.peg.1578
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.174098.peg.539
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.174098.peg.1874
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.174098.peg.1555
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.174098.peg.1554
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.174098.peg.1749
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.174098.peg.1004
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.174098.peg.32
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.174098.peg.363
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.174098.peg.1092
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.174098.peg.40
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.174098.peg.1433
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.174098.peg.1433
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.174098.peg.411
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.174098.peg.1418
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.174098.peg.1417
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.174098.peg.47
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.174098.peg.1563
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.174098.peg.1607
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.174098.peg.239
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.174098.peg.1560
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.174098.peg.995
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.174098.peg.121
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.174098.peg.606
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.174098.peg.1909
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.174098.peg.1343
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.174098.peg.684
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.174098.peg.598
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.174098.peg.867
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.174098.peg.868
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.174098.peg.1285
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.174098.peg.570
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.174098.peg.503
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.174098.peg.921
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.174098.peg.687
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.174098.peg.1443
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.174098.peg.1648
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.174098.peg.1879
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.361
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.1471
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.174098.peg.528
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.174098.peg.1420
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.174098.peg.156
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.174098.peg.901
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.174098.peg.1002
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.174098.peg.1360
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.174098.peg.869
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.174098.peg.288
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.174098.peg.1563
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.174098.peg.1648
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.174098.peg.579
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.174098.peg.540
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.174098.peg.727
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.174098.peg.1055
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.174098.peg.1771
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.174098.peg.2015
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.174098.peg.220
CRISPRs	CRISPR-associated RecB family exonuclease Cas4a	fig|6666666.174098.peg.1779
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.174098.peg.1778
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.174098.peg.1780
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.174098.peg.1808
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.174098.peg.1781
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.174098.peg.1809
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.174098.peg.1406
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.174098.peg.1405
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.174098.peg.1159
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.174098.peg.1652
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.174098.peg.158
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.174098.peg.429
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.174098.peg.1645
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.174098.peg.530
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.174098.peg.1646
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.174098.peg.1317
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.50
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1167
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1307
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.174098.peg.640
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.174098.peg.916
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.174098.peg.1228
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.174098.peg.830
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.174098.peg.1035
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.174098.peg.1036
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.174098.peg.1484
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.174098.peg.660
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.174098.peg.661
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.174098.peg.537
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.174098.peg.454
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1168
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1794
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1168
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1794
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.174098.peg.1
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.174098.peg.242
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.174098.peg.241
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.174098.peg.876
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.174098.peg.402
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.174098.peg.1693
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.174098.peg.1531
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.174098.peg.1066
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.174098.peg.1405
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.174098.peg.1286
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.174098.peg.298
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.174098.peg.299
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.174098.peg.652
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.174098.peg.1800
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.174098.peg.396
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.174098.peg.41
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.174098.peg.1160
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.174098.peg.266
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.174098.peg.265
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.174098.peg.643
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.174098.peg.1671
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.174098.peg.1942
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.174098.peg.37
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.174098.peg.663
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.174098.peg.1149
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.174098.peg.937
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.174098.peg.403
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.174098.peg.1230
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.174098.peg.936
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.174098.peg.694
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.174098.peg.411
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.174098.peg.2016
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.174098.peg.975
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.174098.peg.2016
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.174098.peg.79
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.174098.peg.1244
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.174098.peg.852
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.174098.peg.1241
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.174098.peg.1920
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.174098.peg.306
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.174098.peg.1242
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.174098.peg.1449
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.174098.peg.307
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.174098.peg.306
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.174098.peg.305
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.174098.peg.305
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.174098.peg.307
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.174098.peg.854
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.174098.peg.856
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.174098.peg.11
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.174098.peg.853
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.174098.peg.1243
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.174098.peg.1274
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.174098.peg.1390
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.174098.peg.1965
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.174098.peg.193
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.174098.peg.1390
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.174098.peg.1965
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.174098.peg.570
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.174098.peg.1391
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.174098.peg.1500
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.174098.peg.2019
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.174098.peg.1347
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.174098.peg.805
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.174098.peg.1446
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.174098.peg.1451
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.174098.peg.1475
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.174098.peg.1559
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.174098.peg.1691
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.174098.peg.1691
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.174098.peg.1347
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.174098.peg.805
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.174098.peg.1283
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.174098.peg.1451
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.174098.peg.1475
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.174098.peg.625
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.174098.peg.1058
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.174098.peg.375
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.174098.peg.693
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.174098.peg.1847
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.174098.peg.637
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.174098.peg.975
Conjugative_transposon,_Bacteroidales	Conjugative transposon primase TraP	fig|6666666.174098.peg.121
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.174098.peg.105
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.174098.peg.109
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.174098.peg.1109
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.174098.peg.106
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.174098.peg.1110
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.174098.peg.110
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.174098.peg.111
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.174098.peg.1112
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.174098.peg.112
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.174098.peg.1113
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.174098.peg.113
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.174098.peg.1114
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.174098.peg.114
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.174098.peg.1115
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.174098.peg.115
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.174098.peg.1116
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.174098.peg.116
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.174098.peg.1117
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraL	fig|6666666.174098.peg.117
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.174098.peg.118
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.174098.peg.1119
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.174098.peg.119
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.174098.peg.1120
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.174098.peg.120
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.174098.peg.1121
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.174098.peg.122
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.174098.peg.1122
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.174098.peg.102
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.174098.peg.1106
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.174098.peg.101
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.174098.peg.1105
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.174098.peg.103
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.174098.peg.1107
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.174098.peg.1047
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.174098.peg.1194
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.174098.peg.1926
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.174098.peg.1928
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.174098.peg.1771
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.174098.peg.2015
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.174098.peg.1208
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.174098.peg.2004
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.174098.peg.530
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.174098.peg.2030
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.174098.peg.1174
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.174098.peg.383
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.174098.peg.1717
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.174098.peg.1669
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.174098.peg.483
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.174098.peg.484
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.174098.peg.483
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.174098.peg.484
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.174098.peg.1027
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.174098.peg.1229
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.361
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.1471
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.174098.peg.1494
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.174098.peg.19
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1699
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1702
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1699
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1702
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.174098.peg.1645
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.174098.peg.687
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.174098.peg.1889
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.174098.peg.1669
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.174098.peg.1955
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.174098.peg.332
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.174098.peg.876
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.174098.peg.402
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.174098.peg.578
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.174098.peg.212
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.174098.peg.1098
DNA_processing_cluster	Recombination protein RecR	fig|6666666.174098.peg.685
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.174098.peg.923
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.174098.peg.2023
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.174098.peg.1552
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.174098.peg.1799
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.174098.peg.888
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.174098.peg.30
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.174098.peg.321
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.174098.peg.1051
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.174098.peg.1688
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.174098.peg.1689
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.174098.peg.358
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.174098.peg.819
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.174098.peg.586
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.174098.peg.1039
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.174098.peg.1443
DNA_repair,_bacterial	RecA protein	fig|6666666.174098.peg.1062
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.174098.peg.360
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.174098.peg.1520
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.174098.peg.1992
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.174098.peg.769
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.174098.peg.1548
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.174098.peg.648
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.174098.peg.1515
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.174098.peg.1758
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.174098.peg.1531
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.174098.peg.1785
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.174098.peg.1062
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.174098.peg.685
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.174098.peg.360
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.174098.peg.1955
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.174098.peg.921
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.174098.peg.1992
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.174098.peg.382
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.174098.peg.1062
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.174098.peg.257
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.174098.peg.1208
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.174098.peg.1
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.174098.peg.876
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.174098.peg.402
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.174098.peg.1693
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.174098.peg.1531
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.174098.peg.265
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.174098.peg.1532
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.174098.peg.221
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.174098.peg.683
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.174098.peg.1194
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.174098.peg.212
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.174098.peg.1098
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	fig|6666666.174098.peg.90
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.174098.peg.876
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.174098.peg.402
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.174098.peg.460
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.174098.peg.1560
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.174098.peg.814
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.174098.peg.1404
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.174098.peg.865
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.174098.peg.591
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.174098.peg.1003
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.174098.peg.977
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.174098.peg.865
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.174098.peg.1974
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.174098.peg.1624
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.174098.peg.1624
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.174098.peg.1663
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.174098.peg.186
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.174098.peg.1570
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.174098.peg.1569
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.174098.peg.1402
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.174098.peg.1403
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.174098.peg.1028
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.174098.peg.761
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.174098.peg.1930
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.174098.peg.762
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.174098.peg.599
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.174098.peg.1972
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.174098.peg.817
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.174098.peg.1196
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.174098.peg.1796
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.894
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.1370
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.174098.peg.297
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.174098.peg.322
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.174098.peg.674
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.174098.peg.237
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.174098.peg.1394
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.174098.peg.2002
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.174098.peg.567
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.174098.peg.235
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.174098.peg.1516
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.174098.peg.1517
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.174098.peg.1753
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.174098.peg.370
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.174098.peg.158
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.174098.peg.429
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.174098.peg.230
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.174098.peg.778
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.779
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.780
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.174098.peg.604
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.174098.peg.354
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.174098.peg.1198
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.174098.peg.1970
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.174098.peg.699
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.174098.peg.1661
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.174098.peg.143
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.174098.peg.1662
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.174098.peg.341
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.174098.peg.575
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.174098.peg.238
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.174098.peg.778
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.779
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.780
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.174098.peg.778
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.174098.peg.304
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.779
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.780
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.174098.peg.803
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.174098.peg.1343
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.174098.peg.803
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.174098.peg.1360
Flavodoxin	Flavodoxin	fig|6666666.174098.peg.811
Flavodoxin	Flavodoxin 1	fig|6666666.174098.peg.1698
Flavodoxin	Flavodoxin 2	fig|6666666.174098.peg.1911
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.174098.peg.1911
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.174098.peg.556
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.174098.peg.1057
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.174098.peg.1694
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.174098.peg.937
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.174098.peg.2008
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.174098.peg.1465
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.174098.peg.192
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.174098.peg.527
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.174098.peg.1465
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.174098.peg.1315
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.174098.peg.403
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.174098.peg.1230
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.174098.peg.936
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.174098.peg.2009
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.174098.peg.556
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.174098.peg.1057
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.174098.peg.805
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.174098.peg.41
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.174098.peg.192
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.174098.peg.527
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.174098.peg.1315
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.174098.peg.1160
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.174098.peg.1451
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.174098.peg.1942
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.174098.peg.1982
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.174098.peg.324
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.174098.peg.1346
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.174098.peg.1346
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.174098.peg.1982
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.174098.peg.1050
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.174098.peg.1278
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.174098.peg.1573
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.174098.peg.22
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.174098.peg.704
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.174098.peg.625
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.174098.peg.367
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.174098.peg.1240
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.174098.peg.1929
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.174098.peg.161
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.174098.peg.704
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.174098.peg.1202
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.174098.peg.651
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1699
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1702
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.174098.peg.64
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.174098.peg.1448
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.174098.peg.703
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.174098.peg.1454
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.174098.peg.36
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.174098.peg.1448
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.174098.peg.540
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.174098.peg.668
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1699
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1702
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.174098.peg.1004
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.174098.peg.650
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.174098.peg.1980
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.174098.peg.1980
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.174098.peg.669
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.859
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.1288
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.1422
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.174098.peg.36
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.174098.peg.1607
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.174098.peg.540
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.174098.peg.1150
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.174098.peg.1004
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.174098.peg.650
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.174098.peg.32
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.174098.peg.363
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.174098.peg.825
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.174098.peg.1888
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.174098.peg.1182
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.174098.peg.1246
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.174098.peg.425
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.174098.peg.64
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.174098.peg.1753
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.174098.peg.1159
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.174098.peg.1652
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.174098.peg.370
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.174098.peg.897
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.174098.peg.158
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.174098.peg.429
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.174098.peg.230
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.174098.peg.263
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.174098.peg.942
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.174098.peg.1317
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.174098.peg.1753
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.174098.peg.897
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.174098.peg.429
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.174098.peg.230
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.174098.peg.942
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.174098.peg.1317
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.174098.peg.1785
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.174098.peg.142
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.174098.peg.70
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.361
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.1471
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.174098.peg.1420
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.174098.peg.1841
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.174098.peg.1673
GroEL_GroES	Chaperone protein DnaK	fig|6666666.174098.peg.729
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.174098.peg.1411
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.174098.peg.1410
GroEL_GroES	Heat shock protein GrpE	fig|6666666.174098.peg.1672
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.174098.peg.1673
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.174098.peg.729
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.174098.peg.1672
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.174098.peg.1453
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.174098.peg.498
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.174098.peg.79
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.174098.peg.1305
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.174098.peg.265
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.174098.peg.697
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.174098.peg.336
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.174098.peg.2033
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.174098.peg.1428
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.174098.peg.774
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.174098.peg.1175
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.50
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1167
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1307
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.174098.peg.227
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.174098.peg.533
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.174098.peg.1453
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.174098.peg.76
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.50
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1167
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1307
Hfl_operon	GTP-binding protein HflX	fig|6666666.174098.peg.1724
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.174098.peg.1723
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.174098.peg.1594
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.174098.peg.1599
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.174098.peg.1595
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.174098.peg.1713
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.174098.peg.334
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.174098.peg.72
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.174098.peg.1001
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.174098.peg.498
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.174098.peg.2031
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.174098.peg.2030
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.174098.peg.1269
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.174098.peg.1270
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.174098.peg.33
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.174098.peg.1194
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
Inteins	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.174098.peg.820
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.174098.peg.681
Inteins	Translation initiation factor 2	fig|6666666.174098.peg.346
Inteins	Translation initiation factor 2	fig|6666666.174098.peg.347
Inteins	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.174098.peg.837
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.174098.peg.1648
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.174098.peg.1209
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.174098.peg.662
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.174098.peg.350
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.174098.peg.349
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.174098.peg.351
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.174098.peg.1674
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.174098.peg.77
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.174098.peg.1614
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.174098.peg.777
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.174098.peg.659
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.174098.peg.773
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1168
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1794
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.174098.peg.901
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.174098.peg.2029
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.174098.peg.1002
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.174098.peg.25
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.174098.peg.587
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.174098.peg.1013
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.174098.peg.1333
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.174098.peg.1168
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.174098.peg.1794
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.174098.peg.288
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1168
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1794
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1168
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1794
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.174098.peg.1168
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.174098.peg.1794
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1168
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1794
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.174098.peg.1794
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.174098.peg.288
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.174098.peg.366
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.174098.peg.1284
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.174098.peg.534
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.174098.peg.1910
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.174098.peg.1969
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.174098.peg.1984
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.174098.peg.2034
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.174098.peg.73
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.174098.peg.1312
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.174098.peg.830
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.174098.peg.1035
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.174098.peg.1036
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.174098.peg.1302
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.174098.peg.1675
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.174098.peg.1971
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.174098.peg.900
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.174098.peg.164
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.174098.peg.1722
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.174098.peg.861
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.174098.peg.995
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.174098.peg.482
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.174098.peg.534
LOS_core_oligosaccharide_biosynthesis	Beta-1,3-glucosyltransferase	fig|6666666.174098.peg.218
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.174098.peg.1537
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.174098.peg.1539
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.174098.peg.1538
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.174098.peg.1536
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.174098.peg.1541
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.174098.peg.1540
Lactate_utilization	L-lactate permease	fig|6666666.174098.peg.611
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.174098.peg.860
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.174098.peg.861
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.174098.peg.862
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.174098.peg.863
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.174098.peg.1578
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.174098.peg.474
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.174098.peg.1982
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.174098.peg.1050
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.174098.peg.1278
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.174098.peg.475
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.174098.peg.1578
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.174098.peg.1050
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.174098.peg.1278
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.174098.peg.220
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.174098.peg.659
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.174098.peg.659
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.174098.peg.1150
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.174098.peg.837
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.174098.peg.1425
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.174098.peg.607
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.174098.peg.1425
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.174098.peg.607
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.174098.peg.1027
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.174098.peg.503
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.174098.peg.1147
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.174098.peg.413
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.174098.peg.1026
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.174098.peg.1970
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.174098.peg.1969
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.174098.peg.73
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.174098.peg.290
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.174098.peg.291
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.174098.peg.289
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.174098.peg.1637
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.174098.peg.1675
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.174098.peg.1971
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.174098.peg.359
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.174098.peg.359
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.174098.peg.2
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.174098.peg.1790
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.174098.peg.1948
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.174098.peg.1363
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.174098.peg.46
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.174098.peg.47
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.174098.peg.1146
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.174098.peg.2
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.174098.peg.1790
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.174098.peg.1948
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.174098.peg.1363
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.174098.peg.46
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.174098.peg.47
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.174098.peg.1146
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.174098.peg.770
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.174098.peg.771
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.174098.peg.767
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.174098.peg.766
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.174098.peg.764
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.174098.peg.776
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.174098.peg.777
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.174098.peg.765
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.174098.peg.763
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.174098.peg.772
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.174098.peg.773
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.174098.peg.775
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.174098.peg.1176
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.174098.peg.774
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.174098.peg.1175
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.174098.peg.770
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.174098.peg.771
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.174098.peg.767
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.174098.peg.1402
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.174098.peg.1403
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.174098.peg.121
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.174098.peg.606
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.174098.peg.1909
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.174098.peg.1343
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.174098.peg.1547
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.174098.peg.1349
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.174098.peg.383
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.361
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.1471
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.174098.peg.1228
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.174098.peg.234
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.174098.peg.1182
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.174098.peg.474
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.174098.peg.423
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.174098.peg.1049
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.174098.peg.1246
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.174098.peg.65
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.174098.peg.66
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.174098.peg.393
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.174098.peg.394
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.174098.peg.979
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.174098.peg.1044
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.174098.peg.29
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.174098.peg.2027
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.174098.peg.1461
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.174098.peg.792
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.174098.peg.1982
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.174098.peg.976
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.174098.peg.579
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.174098.peg.1359
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.174098.peg.795
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.174098.peg.804
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.174098.peg.213
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.174098.peg.1433
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.174098.peg.1743
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.174098.peg.1432
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.174098.peg.1582
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.174098.peg.1380
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.174098.peg.1433
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.174098.peg.1743
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.174098.peg.1432
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.174098.peg.1433
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.174098.peg.1202
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.174098.peg.250
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.174098.peg.946
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.174098.peg.2033
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.174098.peg.1503
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.174098.peg.6
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.174098.peg.808
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.174098.peg.579
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.174098.peg.239
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.174098.peg.913
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.174098.peg.1535
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.174098.peg.1534
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.174098.peg.967
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.174098.peg.966
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.174098.peg.965
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.174098.peg.1850
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.174098.peg.1851
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.174098.peg.1852
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.174098.peg.1542
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.174098.peg.514
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.174098.peg.515
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.174098.peg.516
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.174098.peg.37
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.174098.peg.1578
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.174098.peg.382
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.174098.peg.382
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.174098.peg.1401
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.174098.peg.514
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.174098.peg.1311
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.174098.peg.1401
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.174098.peg.1266
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.174098.peg.1958
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.174098.peg.1959
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.174098.peg.515
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.174098.peg.516
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.174098.peg.1615
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.174098.peg.1620
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.174098.peg.1619
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.174098.peg.1618
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.174098.peg.1616
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.174098.peg.1617
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.174098.peg.52
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.174098.peg.54
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.174098.peg.55
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.174098.peg.56
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.174098.peg.57
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.174098.peg.58
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.174098.peg.493
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.174098.peg.491
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.174098.peg.490
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.174098.peg.494
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.174098.peg.1716
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.174098.peg.1266
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.174098.peg.1916
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.174098.peg.1915
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.174098.peg.552
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.174098.peg.907
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.174098.peg.1052
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.174098.peg.901
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.174098.peg.2029
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.174098.peg.1002
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.174098.peg.25
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.174098.peg.587
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.174098.peg.1013
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.174098.peg.1333
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.174098.peg.401
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.174098.peg.1001
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.174098.peg.344
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.174098.peg.1025
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.174098.peg.345
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.174098.peg.346
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.174098.peg.347
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.174098.peg.1694
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.174098.peg.629
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.174098.peg.630
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.174098.peg.1598
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.174098.peg.807
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.174098.peg.807
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.174098.peg.1986
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.174098.peg.359
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.174098.peg.1986
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.174098.peg.552
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.174098.peg.1986
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.174098.peg.21
Oxidative_stress	Rubrerythrin	fig|6666666.174098.peg.293
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.174098.peg.513
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.174098.peg.1533
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.174098.peg.1645
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.174098.peg.186
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.174098.peg.530
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.174098.peg.324
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.174098.peg.1646
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.174098.peg.195
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.174098.peg.195
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.174098.peg.1360
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.174098.peg.1215
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.174098.peg.579
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.174098.peg.1240
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.174098.peg.1158
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.174098.peg.869
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.174098.peg.1358
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.174098.peg.870
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.174098.peg.608
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.174098.peg.899
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.174098.peg.1355
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.174098.peg.1353
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.174098.peg.1354
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.174098.peg.1357
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.174098.peg.1359
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.174098.peg.795
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.174098.peg.804
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.174098.peg.1215
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.174098.peg.1353
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.174098.peg.1354
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.174098.peg.1357
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.174098.peg.1359
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.174098.peg.795
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.174098.peg.804
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.174098.peg.1233
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.174098.peg.1235
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.174098.peg.1237
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.174098.peg.636
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.174098.peg.1516
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.174098.peg.1517
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.174098.peg.1344
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.174098.peg.290
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.174098.peg.291
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.174098.peg.1516
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.174098.peg.1517
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.174098.peg.400
Persister_Cells	HipA protein	fig|6666666.174098.peg.1085
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.174098.peg.1058
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.174098.peg.1054
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.174098.peg.1415
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.174098.peg.1838
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.174098.peg.368
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.174098.peg.621
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.174098.peg.622
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.174098.peg.620
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.174098.peg.1723
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.174098.peg.628
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.174098.peg.1826
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.174098.peg.1827
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.174098.peg.1241
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.174098.peg.1920
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.174098.peg.230
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.174098.peg.540
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.174098.peg.1150
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1699
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.174098.peg.1702
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.174098.peg.1004
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.174098.peg.650
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.174098.peg.64
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.174098.peg.36
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.174098.peg.242
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.174098.peg.241
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.174098.peg.1240
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.174098.peg.1183
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.174098.peg.1152
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.174098.peg.1433
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.174098.peg.244
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.174098.peg.252
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.174098.peg.243
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.174098.peg.777
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.174098.peg.776
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.174098.peg.777
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.174098.peg.763
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.174098.peg.763
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.174098.peg.772
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.174098.peg.368
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.174098.peg.1723
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1168
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.174098.peg.1794
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1168
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.174098.peg.1794
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.174098.peg.1794
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.174098.peg.288
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.174098.peg.1235
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.174098.peg.1237
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.174098.peg.636
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.174098.peg.623
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.174098.peg.2031
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.174098.peg.2031
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.174098.peg.1932
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.174098.peg.2030
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.174098.peg.2030
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.174098.peg.839
Programmed_frameshift	programmed frameshift-containing	fig|6666666.174098.peg.839
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.174098.peg.676
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.779
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.780
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.174098.peg.490
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.174098.peg.494
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.174098.peg.489
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.174098.peg.447
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.174098.peg.552
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.174098.peg.1673
Protein_chaperones	Chaperone protein DnaK	fig|6666666.174098.peg.729
Protein_chaperones	Chaperone protein HtpG	fig|6666666.174098.peg.39
Protein_chaperones	ClpB protein	fig|6666666.174098.peg.810
Protein_chaperones	ClpB protein	fig|6666666.174098.peg.1999
Protein_chaperones	Heat shock protein GrpE	fig|6666666.174098.peg.1672
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.174098.peg.482
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.174098.peg.496
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.174098.peg.1883
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.174098.peg.1186
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.174098.peg.1884
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.174098.peg.8
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.174098.peg.1514
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.174098.peg.1513
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.174098.peg.1320
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.174098.peg.810
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.174098.peg.1999
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.174098.peg.321
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.174098.peg.1794
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.174098.peg.202
Purine_Utilization	Xanthine permease	fig|6666666.174098.peg.136
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.174098.peg.1012
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.174098.peg.271
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.174098.peg.1528
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.174098.peg.271
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.174098.peg.1006
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.174098.peg.1161
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.174098.peg.814
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.174098.peg.1464
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.174098.peg.1346
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.174098.peg.1346
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.174098.peg.1418
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.174098.peg.1160
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.174098.peg.1408
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.174098.peg.225
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.174098.peg.1723
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.894
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.1370
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.174098.peg.137
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.174098.peg.1789
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.174098.peg.819
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.174098.peg.586
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.174098.peg.1346
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.174098.peg.1346
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.174098.peg.1408
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.174098.peg.195
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.174098.peg.2029
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.174098.peg.2002
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.174098.peg.668
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.174098.peg.717
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.174098.peg.158
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.174098.peg.669
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.174098.peg.391
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.174098.peg.1310
Pyrimidine_utilization	Uracil permease	fig|6666666.174098.peg.817
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.174098.peg.1380
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.174098.peg.795
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.174098.peg.659
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.174098.peg.1980
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.174098.peg.1980
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.174098.peg.1643
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.174098.peg.430
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.174098.peg.942
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.174098.peg.778
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.174098.peg.624
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.174098.peg.4
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.779
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.780
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.174098.peg.1457
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.174098.peg.1315
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.174098.peg.708
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.174098.peg.1470
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.174098.peg.654
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.174098.peg.903
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.174098.peg.904
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.174098.peg.557
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.174098.peg.980
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.174098.peg.1430
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.174098.peg.375
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.174098.peg.645
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.174098.peg.1687
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.174098.peg.196
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.174098.peg.1563
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.174098.peg.2004
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.174098.peg.79
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.174098.peg.235
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.174098.peg.652
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.174098.peg.1931
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.174098.peg.802
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.174098.peg.991
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.174098.peg.992
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.174098.peg.1203
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.174098.peg.357
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.174098.peg.242
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.174098.peg.241
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.174098.peg.1066
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.174098.peg.652
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.174098.peg.1800
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.174098.peg.1066
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.174098.peg.1405
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.174098.peg.1286
RNA_modification_cluster	Protein YidD	fig|6666666.174098.peg.298
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.174098.peg.299
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.174098.peg.1880
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.174098.peg.1535
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.174098.peg.1534
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.174098.peg.386
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.174098.peg.684
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.174098.peg.789
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.174098.peg.1660
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.174098.peg.813
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.174098.peg.399
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.174098.peg.1214
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.174098.peg.700
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.174098.peg.1193
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.174098.peg.558
RecA_and_RecX	RecA protein	fig|6666666.174098.peg.1062
RecA_and_RecX	Regulatory protein RecX	fig|6666666.174098.peg.257
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.174098.peg.237
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.174098.peg.1394
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.174098.peg.913
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.174098.peg.158
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.174098.peg.4
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.174098.peg.1266
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.174098.peg.1958
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.174098.peg.1400
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.174098.peg.876
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.174098.peg.402
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.174098.peg.460
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.174098.peg.1560
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.174098.peg.275
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.174098.peg.276
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.174098.peg.1082
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.174098.peg.1084
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.174098.peg.1078
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.174098.peg.1080
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.174098.peg.881
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.174098.peg.536
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.174098.peg.2001
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.174098.peg.1578
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.174098.peg.836
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.174098.peg.537
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.174098.peg.538
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.174098.peg.539
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.174098.peg.1337
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.174098.peg.255
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.174098.peg.582
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.174098.peg.255
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.174098.peg.996
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.174098.peg.1337
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.174098.peg.996
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.174098.peg.1211
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.174098.peg.1337
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.174098.peg.255
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.174098.peg.582
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.174098.peg.382
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.174098.peg.255
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.174098.peg.1993
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.174098.peg.996
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.174098.peg.1337
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.174098.peg.6
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.174098.peg.996
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.174098.peg.1211
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.174098.peg.558
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.174098.peg.1337
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.174098.peg.255
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.174098.peg.582
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.174098.peg.382
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.174098.peg.255
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.174098.peg.1337
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.174098.peg.995
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.174098.peg.275
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.174098.peg.276
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.174098.peg.1972
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.174098.peg.1211
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.174098.peg.530
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.174098.peg.1303
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.174098.peg.1145
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.174098.peg.724
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.174098.peg.1208
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.174098.peg.1208
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.174098.peg.820
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.174098.peg.682
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.174098.peg.681
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.174098.peg.250
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.174098.peg.1850
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.174098.peg.1871
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.174098.peg.1537
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.174098.peg.1539
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.174098.peg.1557
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.174098.peg.1864
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.174098.peg.1872
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.174098.peg.1861
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.174098.peg.1881
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.174098.peg.1870
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.174098.peg.34
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.174098.peg.1538
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.174098.peg.967
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.174098.peg.1609
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.174098.peg.1859
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.174098.peg.1856
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.174098.peg.1865
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.174098.peg.267
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.174098.peg.1608
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.174098.peg.1828
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.174098.peg.1862
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.174098.peg.1857
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.174098.peg.1345
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.174098.peg.1345
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.174098.peg.144
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.174098.peg.1829
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.174098.peg.1829
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.174098.peg.1286
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.174098.peg.966
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.174098.peg.1876
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.174098.peg.1854
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.174098.peg.1855
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.174098.peg.1866
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.174098.peg.1869
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.174098.peg.1536
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.174098.peg.1340
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.174098.peg.1853
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.174098.peg.1878
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.174098.peg.1850
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.174098.peg.1877
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.174098.peg.1867
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.174098.peg.1867
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.174098.peg.1654
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.174098.peg.164
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.174098.peg.1863
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.174098.peg.1341
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.174098.peg.1341
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.174098.peg.1858
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.174098.peg.643
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.174098.peg.384
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.174098.peg.1547
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.174098.peg.1555
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.174098.peg.1860
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.174098.peg.1879
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.174098.peg.1871
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.174098.peg.1342
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.174098.peg.1851
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.174098.peg.1868
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.174098.peg.1556
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.174098.peg.1544
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.174098.peg.1546
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.174098.peg.900
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.174098.peg.196
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.174098.peg.1563
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.174098.peg.399
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.174098.peg.1214
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.174098.peg.1305
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.174098.peg.235
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.174098.peg.700
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.174098.peg.1174
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.174098.peg.1931
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.174098.peg.8
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.174098.peg.1748
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.174098.peg.1555
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.174098.peg.1554
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.174098.peg.1749
Rubrerythrin	Rubrerythrin	fig|6666666.174098.peg.293
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.174098.peg.627
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.174098.peg.1993
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.174098.peg.1142
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.174098.peg.1440
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.174098.peg.22
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.174098.peg.1650
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.174098.peg.1725
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.174098.peg.993
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.174098.peg.668
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.174098.peg.669
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.859
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.1288
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.1422
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.859
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.1288
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.174098.peg.1422
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.174098.peg.36
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.174098.peg.1378
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.174098.peg.503
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.174098.peg.503
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.174098.peg.1791
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.174098.peg.1792
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.174098.peg.1915
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.174098.peg.1419
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.174098.peg.266
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.174098.peg.1411
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.174098.peg.1341
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.174098.peg.1428
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.174098.peg.349
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.174098.peg.25
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.174098.peg.587
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.174098.peg.72
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.174098.peg.396
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.174098.peg.1361
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.174098.peg.453
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.174098.peg.1902
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.174098.peg.1902
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.174098.peg.486
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.174098.peg.487
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.174098.peg.488
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.174098.peg.1150
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.174098.peg.577
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.174098.peg.1841
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.174098.peg.487
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.174098.peg.488
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.174098.peg.587
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.174098.peg.213
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.174098.peg.1046
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.174098.peg.1047
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.174098.peg.1046
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.174098.peg.1047
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.174098.peg.1852
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.174098.peg.1852
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.174098.peg.2029
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.174098.peg.1745
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.174098.peg.172
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.174098.peg.1476
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.174098.peg.173
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.174098.peg.1744
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.174098.peg.174
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.174098.peg.574
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.174098.peg.1746
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.174098.peg.1303
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.174098.peg.175
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiH	fig|6666666.174098.peg.176
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.174098.peg.1322
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.174098.peg.1321
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.174098.peg.359
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.174098.peg.1063
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.174098.peg.378
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.174098.peg.825
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.174098.peg.778
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.779
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.174098.peg.780
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.174098.peg.625
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.174098.peg.1363
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.174098.peg.46
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.174098.peg.703
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.174098.peg.1454
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.174098.peg.554
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.174098.peg.1308
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.50
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1167
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.174098.peg.1307
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.174098.peg.1170
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.174098.peg.1309
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.174098.peg.902
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.174098.peg.546
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.174098.peg.1238
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.174098.peg.1275
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.174098.peg.1298
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.174098.peg.1786
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.174098.peg.344
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.174098.peg.1540
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.174098.peg.417
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.174098.peg.1592
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.174098.peg.345
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.174098.peg.1145
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.174098.peg.1671
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.174098.peg.1343
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.174098.peg.803
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.174098.peg.1852
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.174098.peg.1015
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.174098.peg.672
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.174098.peg.1365
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.174098.peg.1852
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.174098.peg.1015
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.174098.peg.697
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.174098.peg.672
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.174098.peg.1365
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.174098.peg.1554
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.174098.peg.1542
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.174098.peg.1771
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.174098.peg.1025
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.174098.peg.1875
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.174098.peg.346
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.174098.peg.347
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.174098.peg.965
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.174098.peg.340
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.174098.peg.1874
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.174098.peg.1973
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.174098.peg.839
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.174098.peg.303
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.174098.peg.2015
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.174098.peg.266
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.174098.peg.256
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.174098.peg.1748
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.174098.peg.1428
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.174098.peg.223
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.174098.peg.2031
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.174098.peg.1888
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.174098.peg.423
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.174098.peg.1049
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.174098.peg.14
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.174098.peg.1200
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.174098.peg.1082
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.174098.peg.1084
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.174098.peg.1078
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.174098.peg.1080
Type_VI_secretion_systems	ClpB protein	fig|6666666.174098.peg.810
Type_VI_secretion_systems	ClpB protein	fig|6666666.174098.peg.1999
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.174098.peg.792
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.174098.peg.608
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.174098.peg.899
USS-DB-7	ClpB protein	fig|6666666.174098.peg.810
USS-DB-7	ClpB protein	fig|6666666.174098.peg.1999
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.174098.peg.42
Universal_GTPases	GTP-binding protein EngA	fig|6666666.174098.peg.141
Universal_GTPases	GTP-binding protein EngB	fig|6666666.174098.peg.1579
Universal_GTPases	GTP-binding protein Era	fig|6666666.174098.peg.142
Universal_GTPases	GTP-binding protein HflX	fig|6666666.174098.peg.1724
Universal_GTPases	GTP-binding protein Obg	fig|6666666.174098.peg.1162
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.174098.peg.1325
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.174098.peg.1066
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.174098.peg.1747
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.174098.peg.251
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.174098.peg.806
Universal_GTPases	Translation elongation factor G	fig|6666666.174098.peg.1852
Universal_GTPases	Translation elongation factor LepA	fig|6666666.174098.peg.697
Universal_GTPases	Translation elongation factor Tu	fig|6666666.174098.peg.1542
Universal_GTPases	Translation initiation factor 2	fig|6666666.174098.peg.346
Universal_GTPases	Translation initiation factor 2	fig|6666666.174098.peg.347
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.174098.peg.195
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.174098.peg.1652
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.174098.peg.478
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.174098.peg.1039
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.174098.peg.332
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.174098.peg.1897
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.174098.peg.1898
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.174098.peg.1896
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.174098.peg.1899
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.174098.peg.1895
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.174098.peg.1900
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.174098.peg.1901
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.174098.peg.777
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.174098.peg.659
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.174098.peg.773
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.174098.peg.136
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.174098.peg.137
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.174098.peg.1169
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.174098.peg.297
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.174098.peg.1174
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.174098.peg.383
YjeE	NAD(P)HX dehydratase	fig|6666666.174098.peg.1968
YjeE	NAD(P)HX epimerase	fig|6666666.174098.peg.1968
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.174098.peg.1174
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.174098.peg.1021
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.174098.peg.1513
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.174098.peg.1351
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.174098.peg.1352
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.174098.peg.1356
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.174098.peg.1350
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.174098.peg.1215
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.174098.peg.1353
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.174098.peg.1354
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.174098.peg.1351
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.174098.peg.1352
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.174098.peg.1350
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.174098.peg.1355
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.174098.peg.1789
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.174098.peg.536
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.174098.peg.537
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.174098.peg.538
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.174098.peg.539
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.174098.peg.1648
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.174098.peg.1209
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.174098.peg.1066
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.174098.peg.1800
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.174098.peg.777
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.174098.peg.840
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.174098.peg.1757
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.174098.peg.1194
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.174098.peg.360
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.174098.peg.271
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.174098.peg.1528
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.174098.peg.271
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.174098.peg.1406
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.174098.peg.27
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.174098.peg.1334
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.894
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.174098.peg.1370
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.174098.peg.825
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.174098.peg.1023
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.174098.peg.2009
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.174098.peg.1196
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.174098.peg.365
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.174098.peg.1679
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.174098.peg.1337
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.174098.peg.996
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.174098.peg.996
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.174098.peg.1211
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.174098.peg.1027
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.174098.peg.1027
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.361
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.174098.peg.1471
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.174098.peg.1420
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.174098.peg.978
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.174098.peg.946
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.174098.peg.694
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.174098.peg.356
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.174098.peg.812
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.174098.peg.253
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.174098.peg.1717
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.174098.peg.1839
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.174098.peg.533
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.174098.peg.70
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.174098.peg.2007
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.174098.peg.505
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.174098.peg.1156
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.174098.peg.895
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.174098.peg.269
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.174098.peg.1668
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.174098.peg.1994
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.174098.peg.1922
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.174098.peg.989
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.174098.peg.1607
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.174098.peg.964
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.174098.peg.198
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.174098.peg.353
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.174098.peg.823
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.174098.peg.1648
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.174098.peg.1209
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.174098.peg.27
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.174098.peg.411
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.174098.peg.1941
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.174098.peg.1315
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.174098.peg.1066
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.174098.peg.350
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.174098.peg.349
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.174098.peg.351
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.174098.peg.196
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.174098.peg.654
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.174098.peg.903
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.174098.peg.904
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.174098.peg.557
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.174098.peg.980
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.174098.peg.1650
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.174098.peg.1725
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.174098.peg.1931
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.174098.peg.991
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.174098.peg.992
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.174098.peg.1203
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.174098.peg.18
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.174098.peg.1409
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.174098.peg.1588
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.174098.peg.1193
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.174098.peg.558
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.174098.peg.1800
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.174098.peg.1942
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.174098.peg.1430
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.174098.peg.946
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.174098.peg.1206
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.174098.peg.1152
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.174098.peg.299
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.174098.peg.1205
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.174098.peg.1409
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.174098.peg.1588
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.174098.peg.1193
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.174098.peg.558
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.174098.peg.1942
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.174098.peg.946
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.174098.peg.1206
tRNAs	tRNA-Ala-GGC	fig|6666666.174098.rna.36
tRNAs	tRNA-Arg-ACG	fig|6666666.174098.rna.30
tRNAs	tRNA-Arg-ACG	fig|6666666.174098.rna.31
tRNAs	tRNA-Arg-CCG	fig|6666666.174098.rna.42
tRNAs	tRNA-Cys-GCA	fig|6666666.174098.rna.65
tRNAs	tRNA-Gly-CCC	fig|6666666.174098.rna.39
tRNAs	tRNA-Gly-GCC	fig|6666666.174098.rna.44
tRNAs	tRNA-Gly-GCC	fig|6666666.174098.rna.64
tRNAs	tRNA-Leu-CAA	fig|6666666.174098.rna.43
tRNAs	tRNA-Leu-CAG	fig|6666666.174098.rna.63
tRNAs	tRNA-Leu-GAG	fig|6666666.174098.rna.62
tRNAs	tRNA-Phe-GAA	fig|6666666.174098.rna.34
tRNAs	tRNA-Pro-CGG	fig|6666666.174098.rna.5
tRNAs	tRNA-Pro-GGG	fig|6666666.174098.rna.28
tRNAs	tRNA-Ser-GGA	fig|6666666.174098.rna.40
tRNAs	tRNA-Trp-CCA	fig|6666666.174098.rna.49
