16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148645.peg.1316
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.148645.peg.1317
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148645.peg.492
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.148645.peg.1318
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.148645.peg.231
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148645.peg.1720
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148645.peg.753
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148645.peg.1972
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148645.peg.1048
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148645.peg.568
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148645.peg.1564
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148645.peg.1560
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148645.peg.784
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148645.peg.488
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148645.peg.1628
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148645.peg.33
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148645.peg.372
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148645.peg.2020
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148645.peg.1260
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.230
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.889
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.1119
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.1152
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.1494
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.1629
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.1693
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.2016
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148645.peg.2046
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148645.peg.259
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148645.peg.949
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.148645.peg.62
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148645.peg.147
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148645.peg.2009
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148645.peg.757
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148645.peg.756
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148645.peg.757
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148645.peg.743
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148645.peg.752
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148645.peg.753
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148645.peg.755
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148645.peg.1074
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148645.peg.754
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148645.peg.1073
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148645.peg.1395
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.512
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.1327
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148645.peg.1395
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.148645.peg.401
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.148645.peg.400
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.148645.peg.399
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.148645.peg.398
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.148645.peg.397
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.148645.peg.404
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.148645.peg.403
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.148645.peg.772
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148645.peg.598
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148645.peg.1613
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148645.peg.1110
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.148645.peg.505
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1725
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1727
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148645.peg.669
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148645.peg.994
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148645.peg.753
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1066
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1851
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148645.peg.1066
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148645.peg.1851
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1066
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1851
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148645.peg.860
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148645.peg.860
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148645.peg.135
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148645.peg.860
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148645.peg.615
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148645.peg.134
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148645.peg.613
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.148645.peg.484
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148645.peg.1174
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148645.peg.1175
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148645.peg.1394
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148645.peg.367
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.148645.peg.1308
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148645.peg.38
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148645.peg.1316
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.148645.peg.295
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.148645.peg.1317
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.148645.peg.1309
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.148645.peg.1312
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.148645.peg.455
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148645.peg.1307
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.148645.peg.2104
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.148645.peg.1082
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148645.peg.133
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148645.peg.625
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.148645.peg.2055
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.148645.peg.489
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.148645.peg.490
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.148645.peg.491
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.148645.peg.1242
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.148645.peg.928
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148645.peg.142
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.148645.peg.1318
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148645.peg.367
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.148645.peg.1308
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148645.peg.1316
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.148645.peg.295
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.148645.peg.1317
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.148645.peg.1309
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.148645.peg.1312
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148645.peg.1307
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148645.peg.133
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148645.peg.132
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.148645.peg.489
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.148645.peg.490
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.148645.peg.491
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.148645.peg.493
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.148645.peg.1242
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.148645.peg.928
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.148645.peg.133
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.148645.peg.132
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.148645.peg.295
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148645.peg.984
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148645.peg.2114
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148645.peg.1081
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.148645.peg.2130
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148645.peg.1072
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148645.peg.275
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.148645.peg.988
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148645.peg.492
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.148645.peg.489
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.148645.peg.490
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.148645.peg.491
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.148645.peg.493
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.148645.peg.1242
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.148645.peg.928
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.148645.peg.395
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.148645.peg.395
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148645.peg.769
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148645.peg.142
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148645.peg.783
Beta-lactamase	Beta-lactamase (EC 3.5.2.6)	fig|6666666.148645.peg.690
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148645.peg.364
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148645.peg.718
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148645.peg.1644
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148645.peg.1335
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148645.peg.1991
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.148645.peg.1992
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.148645.peg.311
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.148645.peg.312
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.148645.peg.1195
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148645.peg.385
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148645.peg.1963
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148645.peg.815
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148645.peg.1694
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148645.peg.718
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148645.peg.1644
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148645.peg.1991
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.148645.peg.1992
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.148645.peg.311
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.148645.peg.312
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.148645.peg.1195
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148645.peg.149
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148645.peg.1963
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148645.peg.718
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148645.peg.1644
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148645.peg.1335
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148645.peg.1991
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.148645.peg.1992
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.148645.peg.311
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.148645.peg.312
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.148645.peg.1195
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148645.peg.385
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148645.peg.149
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148645.peg.1963
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148645.peg.815
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148645.peg.1694
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148645.peg.766
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.148645.peg.961
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.148645.peg.242
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148645.peg.452
CBSS-1496.1.peg.2937	FIG116849: hypothetical protein	fig|6666666.148645.peg.980
CBSS-1496.1.peg.2937	FIG131328: Predicted ATP-dependent endonuclease of the OLD family	fig|6666666.148645.peg.979
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.148645.peg.1060
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.148645.peg.1575
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.148645.peg.1574
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148645.peg.507
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148645.peg.930
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148645.peg.291
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148645.peg.1056
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148645.peg.290
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148645.peg.615
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148645.peg.595
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148645.peg.857
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.148645.peg.1404
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.148645.peg.1624
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.148645.peg.1624
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148645.peg.451
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148645.peg.916
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148645.peg.1379
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.148645.peg.62
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148645.peg.147
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148645.peg.113
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148645.peg.590
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.148645.peg.589
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.148645.peg.588
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148645.peg.162
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148645.peg.1492
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.148645.peg.1491
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.148645.peg.1490
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148645.peg.639
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.148645.peg.758
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148645.peg.270
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148645.peg.590
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148645.peg.1522
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148645.peg.590
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148645.peg.1522
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.148645.peg.2056
CBSS-296591.1.peg.2330	NAD-dependent epimerase/dehydratase family protein	fig|6666666.148645.peg.1817
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148645.peg.1543
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148645.peg.434
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148645.peg.1775
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.148645.peg.1518
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.148645.peg.1517
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148645.peg.1765
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.148645.peg.938
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148645.peg.29
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148645.peg.256
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148645.peg.1868
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.148645.peg.37
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148645.peg.1395
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148645.peg.1395
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.148645.peg.357
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148645.peg.1367
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.148645.peg.1366
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148645.peg.2102
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.148645.peg.1526
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148645.peg.1573
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148645.peg.130
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148645.peg.1523
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148645.peg.930
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.541
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.674
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.710
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.1222
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.1390
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.1680
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148645.peg.1300
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148645.peg.625
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.148645.peg.533
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.148645.peg.490
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.148645.peg.491
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.148645.peg.1242
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148645.peg.478
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148645.peg.388
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148645.peg.863
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.148645.peg.628
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148645.peg.1403
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148645.peg.1613
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.148645.peg.1770
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.254
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.1433
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.148645.peg.393
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148645.peg.1369
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.148645.peg.2039
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148645.peg.519
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148645.peg.936
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148645.peg.1316
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148645.peg.492
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148645.peg.180
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.148645.peg.1526
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148645.peg.1613
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148645.peg.467
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148645.peg.435
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148645.peg.669
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148645.peg.994
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148645.peg.1865
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148645.peg.2114
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148645.peg.109
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.148645.peg.1355
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148645.peg.1354
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148645.peg.1057
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148645.peg.1617
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148645.peg.2037
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148645.peg.343
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148645.peg.1610
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148645.peg.391
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.148645.peg.1611
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148645.peg.1275
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1065
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1264
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.2099
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148645.peg.595
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148645.peg.857
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.148645.peg.1129
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148645.peg.806
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148645.peg.970
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.148645.peg.1446
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.148645.peg.599
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.148645.peg.600
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148645.peg.432
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.148645.peg.314
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1066
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1851
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1066
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1851
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.148645.peg.1
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148645.peg.133
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148645.peg.132
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148645.peg.499
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148645.peg.362
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148645.peg.1719
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.148645.peg.1495
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148645.peg.1005
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.148645.peg.1354
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.148645.peg.1243
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.148645.peg.189
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148645.peg.190
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148645.peg.583
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148645.peg.1845
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148645.peg.367
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148645.peg.38
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148645.peg.1058
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148645.peg.157
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148645.peg.156
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.148645.peg.592
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.148645.peg.1638
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148645.peg.1956
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148645.peg.34
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148645.peg.602
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148645.peg.1047
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148645.peg.873
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148645.peg.361
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148645.peg.1133
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148645.peg.872
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148645.peg.634
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.148645.peg.357
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148645.peg.2115
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148645.peg.911
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148645.peg.2115
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148645.peg.2069
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148645.peg.1147
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148645.peg.827
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148645.peg.1144
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148645.peg.1933
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148645.peg.198
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148645.peg.1145
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148645.peg.1409
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148645.peg.202
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148645.peg.198
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148645.peg.197
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148645.peg.197
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148645.peg.202
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148645.peg.829
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148645.peg.831
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148645.peg.10
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148645.peg.828
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148645.peg.1146
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148645.peg.1180
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148645.peg.54
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148645.peg.1341
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.148645.peg.2001
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148645.peg.54
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148645.peg.1341
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148645.peg.478
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148645.peg.1342
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148645.peg.1461
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.148645.peg.2118
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148645.peg.1304
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148645.peg.782
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.148645.peg.1406
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148645.peg.1411
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148645.peg.1437
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148645.peg.1522
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.148645.peg.1717
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.148645.peg.1717
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148645.peg.1304
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148645.peg.782
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.148645.peg.1240
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148645.peg.1411
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148645.peg.1437
Coenzyme_B12_biosynthesis	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	fig|6666666.148645.peg.1253
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148645.peg.1147
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148645.peg.827
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148645.peg.1144
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148645.peg.1933
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148645.peg.198
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148645.peg.1145
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148645.peg.1409
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148645.peg.202
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148645.peg.198
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148645.peg.197
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148645.peg.197
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.148645.peg.201
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.148645.peg.201
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148645.peg.202
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148645.peg.829
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148645.peg.831
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148645.peg.10
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148645.peg.828
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148645.peg.1146
Coenzyme_B12_biosynthesis	Predicted cobalt transporter in Bacteroides_Porphyromonas	fig|6666666.148645.peg.476
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148645.peg.1180
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.148645.peg.1178
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148645.peg.1177
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148645.peg.1251
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148645.peg.562
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.148645.peg.997
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148645.peg.268
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.148645.peg.633
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.148645.peg.1805
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.148645.peg.576
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148645.peg.911
Conjugative_transposon,_Bacteroidales	Conjugative transposon primase TraP	fig|6666666.148645.peg.1222
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148645.peg.1206
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148645.peg.1210
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148645.peg.1897
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148645.peg.673
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148645.peg.698
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148645.peg.711
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148645.peg.1207
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148645.peg.1898
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.148645.peg.1211
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148645.peg.1212
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148645.peg.1900
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148645.peg.1213
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148645.peg.1901
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148645.peg.1214
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148645.peg.1902
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148645.peg.1215
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148645.peg.1903
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148645.peg.1216
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148645.peg.1904
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148645.peg.1217
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148645.peg.1905
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraL	fig|6666666.148645.peg.1218
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148645.peg.1219
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148645.peg.1907
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148645.peg.1220
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148645.peg.1909
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148645.peg.1221
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148645.peg.1910
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148645.peg.1223
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148645.peg.1911
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148645.peg.1203
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148645.peg.1886
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148645.peg.1893
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148645.peg.1202
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148645.peg.1885
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148645.peg.1892
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148645.peg.696
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148645.peg.1204
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148645.peg.1894
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148645.peg.984
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148645.peg.1094
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.148645.peg.1939
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148645.peg.1865
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148645.peg.2114
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148645.peg.1109
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148645.peg.1975
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148645.peg.391
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.148645.peg.2130
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148645.peg.1072
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148645.peg.275
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148645.peg.1741
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.148645.peg.1636
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148645.peg.290
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148645.peg.290
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.148645.peg.963
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.148645.peg.1130
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.254
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.1433
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.148645.peg.1457
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.148645.peg.18
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1725
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1727
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1725
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1727
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148645.peg.1610
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.148645.peg.628
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.148645.peg.1660
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.148645.peg.1636
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148645.peg.44
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.148645.peg.226
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148645.peg.499
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148645.peg.362
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.148645.peg.470
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148645.peg.94
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148645.peg.1878
DNA_processing_cluster	Recombination protein RecR	fig|6666666.148645.peg.626
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.148645.peg.865
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.148645.peg.2123
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.148645.peg.1515
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.148645.peg.1846
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148645.peg.507
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.148645.peg.28
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.148645.peg.214
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.148645.peg.988
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.148645.peg.1715
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.148645.peg.251
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148645.peg.797
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148645.peg.458
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148645.peg.973
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148645.peg.1403
DNA_repair,_bacterial	RecA protein	fig|6666666.148645.peg.1001
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.148645.peg.253
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.148645.peg.1485
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.148645.peg.83
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.148645.peg.749
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.148645.peg.1510
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148645.peg.587
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.148645.peg.1481
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.148645.peg.1695
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.148645.peg.1495
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.148645.peg.1861
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.148645.peg.1001
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.148645.peg.626
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.148645.peg.253
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148645.peg.44
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148645.peg.863
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.148645.peg.83
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.148645.peg.274
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.148645.peg.1001
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.148645.peg.148
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148645.peg.1109
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.148645.peg.1
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148645.peg.499
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148645.peg.362
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148645.peg.1719
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.148645.peg.1495
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148645.peg.156
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.148645.peg.1496
DNA_structural_proteins,_bacterial	Chromosome partition protein MukB	fig|6666666.148645.peg.1729
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.148645.peg.111
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.148645.peg.624
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148645.peg.1094
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148645.peg.94
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148645.peg.1878
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	fig|6666666.148645.peg.1192
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148645.peg.499
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148645.peg.362
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148645.peg.308
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148645.peg.1523
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148645.peg.792
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.148645.peg.1353
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.148645.peg.488
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.148645.peg.524
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.148645.peg.937
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.148645.peg.913
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148645.peg.488
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.148645.peg.63
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.148645.peg.1590
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.148645.peg.1590
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148645.peg.1628
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148645.peg.2009
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.148645.peg.1533
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.148645.peg.1532
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148645.peg.1351
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148645.peg.1352
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.148645.peg.964
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148645.peg.741
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148645.peg.1941
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.148645.peg.742
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.148645.peg.534
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148645.peg.61
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.148645.peg.795
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148645.peg.1097
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.148645.peg.1849
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.512
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.1327
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.148645.peg.188
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.148645.peg.215
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148645.peg.613
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148645.peg.128
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148645.peg.1344
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148645.peg.1977
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.148645.peg.480
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148645.peg.126
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148645.peg.1482
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.148645.peg.1690
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148645.peg.263
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148645.peg.2037
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148645.peg.343
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148645.peg.121
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.148645.peg.758
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148645.peg.759
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148645.peg.539
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148645.peg.248
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148645.peg.1099
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148645.peg.59
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148645.peg.639
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.148645.peg.1626
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.148645.peg.2054
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.148645.peg.1627
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.148645.peg.236
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.148645.peg.473
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.148645.peg.129
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148645.peg.758
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148645.peg.759
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.148645.peg.758
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.148645.peg.196
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148645.peg.759
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.148645.peg.780
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148645.peg.1300
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.148645.peg.780
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148645.peg.1316
Flavodoxin	Flavodoxin	fig|6666666.148645.peg.789
Flavodoxin	Flavodoxin 1	fig|6666666.148645.peg.1724
Flavodoxin	Flavodoxin 2	fig|6666666.148645.peg.1682
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.148645.peg.1682
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148645.peg.450
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148645.peg.996
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148645.peg.1720
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148645.peg.873
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148645.peg.1972
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.148645.peg.1427
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148645.peg.2002
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148645.peg.394
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.148645.peg.1427
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148645.peg.1273
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148645.peg.361
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148645.peg.1133
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148645.peg.872
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148645.peg.1971
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148645.peg.450
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148645.peg.996
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148645.peg.782
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148645.peg.38
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148645.peg.2002
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148645.peg.394
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148645.peg.1273
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148645.peg.1058
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148645.peg.1411
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148645.peg.1956
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148645.peg.73
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.148645.peg.218
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148645.peg.1303
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148645.peg.1303
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148645.peg.73
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148645.peg.987
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148645.peg.1235
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.148645.peg.1539
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.148645.peg.20
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148645.peg.646
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148645.peg.562
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.148645.peg.260
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148645.peg.1143
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148645.peg.1940
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.148645.peg.2035
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148645.peg.646
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148645.peg.1103
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.148645.peg.584
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1725
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1727
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148645.peg.2085
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148645.peg.1408
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148645.peg.1875
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148645.peg.644
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148645.peg.33
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148645.peg.1408
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148645.peg.1875
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148645.peg.435
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148645.peg.607
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1725
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1727
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.148645.peg.938
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148645.peg.585
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148645.peg.71
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148645.peg.71
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148645.peg.608
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.839
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.1245
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.1371
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148645.peg.33
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148645.peg.1573
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148645.peg.435
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148645.peg.1048
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.148645.peg.938
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148645.peg.585
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148645.peg.29
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148645.peg.256
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148645.peg.803
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148645.peg.1659
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148645.peg.1080
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148645.peg.1151
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.148645.peg.347
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148645.peg.2085
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.148645.peg.1690
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148645.peg.1057
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148645.peg.1617
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148645.peg.263
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148645.peg.515
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148645.peg.2037
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148645.peg.343
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148645.peg.121
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.148645.peg.154
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148645.peg.878
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148645.peg.1275
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.148645.peg.1690
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148645.peg.515
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148645.peg.343
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148645.peg.121
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148645.peg.878
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148645.peg.1275
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.148645.peg.1861
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.148645.peg.2055
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148645.peg.2078
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.254
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.1433
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148645.peg.1369
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148645.peg.1810
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.148645.peg.1640
GroEL_GroES	Chaperone protein DnaK	fig|6666666.148645.peg.705
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.148645.peg.1360
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.148645.peg.1359
GroEL_GroES	Heat shock protein GrpE	fig|6666666.148645.peg.1639
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.148645.peg.1640
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.148645.peg.705
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.148645.peg.1639
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148645.peg.1413
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148645.peg.383
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148645.peg.2069
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148645.peg.1262
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148645.peg.156
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.148645.peg.637
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.148645.peg.231
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148645.peg.2133
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.148645.peg.1377
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148645.peg.754
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148645.peg.1073
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1065
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1264
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.2099
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.148645.peg.117
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148645.peg.428
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148645.peg.1413
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.148645.peg.2072
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1065
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1264
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.2099
Hfl_operon	GTP-binding protein HflX	fig|6666666.148645.peg.1749
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148645.peg.1748
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148645.peg.1560
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.148645.peg.1565
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.148645.peg.1561
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.148645.peg.1736
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.148645.peg.229
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148645.peg.2076
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148645.peg.935
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148645.peg.383
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.148645.peg.2131
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.148645.peg.2130
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148645.peg.1174
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148645.peg.1175
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.148645.peg.30
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148645.peg.1094
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
Inteins	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148645.peg.798
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148645.peg.622
Inteins	Translation initiation factor 2	fig|6666666.148645.peg.242
Inteins	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148645.peg.812
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148645.peg.1613
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148645.peg.1110
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.148645.peg.601
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148645.peg.245
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.148645.peg.244
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.148645.peg.246
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.148645.peg.1641
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.148645.peg.2071
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.148645.peg.1580
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148645.peg.757
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148645.peg.598
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148645.peg.753
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1066
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1851
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148645.peg.519
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148645.peg.2129
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148645.peg.936
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148645.peg.23
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148645.peg.457
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148645.peg.949
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148645.peg.1291
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148645.peg.1066
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148645.peg.1851
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148645.peg.180
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1066
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1851
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1066
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1851
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148645.peg.1066
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148645.peg.1851
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1066
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1851
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148645.peg.1851
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148645.peg.180
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148645.peg.259
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.148645.peg.1241
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.148645.peg.1681
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148645.peg.58
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.148645.peg.75
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.148645.peg.2134
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148645.peg.2075
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.148645.peg.1269
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148645.peg.806
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148645.peg.970
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.148645.peg.1259
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148645.peg.1642
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148645.peg.60
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.148645.peg.518
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.148645.peg.2031
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.148645.peg.1747
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148645.peg.841
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148645.peg.930
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148645.peg.291
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.148645.peg.1501
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.148645.peg.1503
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148645.peg.1502
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148645.peg.1500
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.148645.peg.1505
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.148645.peg.1504
Lactate_utilization	L-lactate permease	fig|6666666.148645.peg.546
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.148645.peg.840
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148645.peg.841
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.148645.peg.842
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148645.peg.1543
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148645.peg.299
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148645.peg.73
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148645.peg.987
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148645.peg.1235
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.148645.peg.298
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148645.peg.1543
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148645.peg.987
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148645.peg.1235
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148645.peg.109
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148645.peg.598
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148645.peg.598
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148645.peg.1048
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148645.peg.812
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.148645.peg.1374
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148645.peg.542
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.148645.peg.1374
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148645.peg.542
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148645.peg.963
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148645.peg.388
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.148645.peg.1045
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.148645.peg.355
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.148645.peg.962
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148645.peg.59
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148645.peg.58
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148645.peg.2075
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148645.peg.182
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148645.peg.183
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148645.peg.181
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148645.peg.1602
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148645.peg.1642
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148645.peg.60
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.148645.peg.252
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.148645.peg.252
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148645.peg.2
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148645.peg.1855
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148645.peg.1962
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148645.peg.1320
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.148645.peg.2103
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148645.peg.2102
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148645.peg.1044
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148645.peg.2
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148645.peg.1855
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148645.peg.1962
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148645.peg.1320
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.148645.peg.2103
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148645.peg.2102
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148645.peg.1044
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148645.peg.750
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148645.peg.751
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148645.peg.747
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.148645.peg.746
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.148645.peg.744
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148645.peg.756
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148645.peg.757
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.148645.peg.745
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148645.peg.743
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148645.peg.752
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148645.peg.753
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148645.peg.755
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148645.peg.1074
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148645.peg.754
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148645.peg.1073
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148645.peg.750
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148645.peg.751
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148645.peg.747
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148645.peg.1351
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148645.peg.1352
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.541
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.674
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.710
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.1222
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.1390
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148645.peg.1680
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148645.peg.1300
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.148645.peg.1509
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.148645.peg.1306
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148645.peg.275
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.254
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.1433
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.148645.peg.1129
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.148645.peg.125
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148645.peg.1080
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148645.peg.299
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148645.peg.349
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148645.peg.986
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148645.peg.1151
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148645.peg.2083
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148645.peg.2084
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148645.peg.284
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148645.peg.286
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148645.peg.915
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148645.peg.981
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.148645.peg.27
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.148645.peg.2126
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.148645.peg.1423
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.148645.peg.769
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148645.peg.73
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148645.peg.912
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148645.peg.467
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148645.peg.1315
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148645.peg.772
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148645.peg.781
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148645.peg.96
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148645.peg.1395
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148645.peg.1759
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148645.peg.1394
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.148645.peg.1547
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148645.peg.1334
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148645.peg.1395
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148645.peg.1759
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148645.peg.1394
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148645.peg.1395
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148645.peg.1103
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148645.peg.141
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148645.peg.882
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148645.peg.2133
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.148645.peg.1465
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148645.peg.6
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.148645.peg.785
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148645.peg.467
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148645.peg.130
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148645.peg.854
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148645.peg.1499
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148645.peg.1498
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.148645.peg.902
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.148645.peg.901
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.148645.peg.900
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.148645.peg.1799
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.148645.peg.1798
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.148645.peg.1797
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.148645.peg.1506
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148645.peg.407
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148645.peg.406
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148645.peg.405
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148645.peg.34
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148645.peg.1543
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148645.peg.274
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148645.peg.274
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.148645.peg.1350
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148645.peg.407
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.148645.peg.1268
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.148645.peg.1350
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148645.peg.1170
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148645.peg.47
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.148645.peg.48
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148645.peg.406
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148645.peg.405
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.148645.peg.1581
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.148645.peg.1586
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.148645.peg.1585
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.148645.peg.1584
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.148645.peg.1582
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.148645.peg.1583
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.148645.peg.2097
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.148645.peg.2095
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.148645.peg.2094
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.148645.peg.2093
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.148645.peg.2092
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.148645.peg.2091
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.148645.peg.377
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.148645.peg.375
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148645.peg.374
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148645.peg.378
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148645.peg.378
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.148645.peg.1740
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148645.peg.1170
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.148645.peg.1687
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148645.peg.1686
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148645.peg.446
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.148645.peg.849
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.148645.peg.989
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148645.peg.519
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148645.peg.2129
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148645.peg.936
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148645.peg.23
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148645.peg.457
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148645.peg.949
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148645.peg.1291
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.148645.peg.363
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148645.peg.935
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148645.peg.240
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.148645.peg.961
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.148645.peg.241
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.148645.peg.242
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148645.peg.1720
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148645.peg.568
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148645.peg.1564
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.148645.peg.784
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148645.peg.784
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.148645.peg.77
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.148645.peg.252
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.148645.peg.77
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148645.peg.446
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.148645.peg.77
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.148645.peg.19
Oxidative_stress	Rubrerythrin	fig|6666666.148645.peg.184
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148645.peg.421
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148645.peg.422
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148645.peg.1497
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148645.peg.1610
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148645.peg.2009
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148645.peg.391
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.148645.peg.218
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.148645.peg.1611
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148645.peg.1999
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148645.peg.1999
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148645.peg.1316
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148645.peg.1117
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148645.peg.467
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148645.peg.1143
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148645.peg.1056
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148645.peg.492
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.148645.peg.1314
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.148645.peg.493
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148645.peg.544
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148645.peg.517
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148645.peg.1311
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148645.peg.1310
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148645.peg.1313
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148645.peg.1315
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148645.peg.772
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148645.peg.781
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148645.peg.1117
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148645.peg.1310
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148645.peg.1313
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148645.peg.1315
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148645.peg.772
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148645.peg.781
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.148645.peg.1137
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148645.peg.1138
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148645.peg.1139
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148645.peg.575
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148645.peg.1482
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.148645.peg.1301
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148645.peg.182
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148645.peg.183
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148645.peg.1482
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148645.peg.364
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.148645.peg.997
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148645.peg.993
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148645.peg.1364
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.148645.peg.1815
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148645.peg.261
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148645.peg.556
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148645.peg.557
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.148645.peg.555
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148645.peg.1748
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.148645.peg.566
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.148645.peg.1824
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148645.peg.1144
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148645.peg.1933
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148645.peg.121
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148645.peg.435
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148645.peg.1048
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1725
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148645.peg.1727
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.148645.peg.938
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148645.peg.585
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148645.peg.2085
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148645.peg.33
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148645.peg.133
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148645.peg.132
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148645.peg.1143
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148645.peg.1081
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148645.peg.1049
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148645.peg.1395
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148645.peg.135
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.148645.peg.143
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148645.peg.134
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148645.peg.757
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148645.peg.756
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148645.peg.757
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148645.peg.743
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148645.peg.743
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148645.peg.752
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148645.peg.261
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148645.peg.1748
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1066
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148645.peg.1851
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1066
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148645.peg.1851
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148645.peg.1851
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148645.peg.180
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148645.peg.1138
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148645.peg.1139
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148645.peg.575
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.148645.peg.559
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148645.peg.2131
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148645.peg.2131
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148645.peg.1943
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148645.peg.2130
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148645.peg.2130
Potassium_homeostasis	cAMP-dependent Kef-type K+ transport system	fig|6666666.148645.peg.380
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.148645.peg.814
Programmed_frameshift	programmed frameshift-containing	fig|6666666.148645.peg.814
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148645.peg.615
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148645.peg.759
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148645.peg.374
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148645.peg.378
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.148645.peg.373
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.148645.peg.324
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148645.peg.446
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.148645.peg.1640
Protein_chaperones	Chaperone protein DnaK	fig|6666666.148645.peg.705
Protein_chaperones	Chaperone protein HtpG	fig|6666666.148645.peg.35
Protein_chaperones	ClpB protein	fig|6666666.148645.peg.788
Protein_chaperones	ClpB protein	fig|6666666.148645.peg.1980
Protein_chaperones	Heat shock protein GrpE	fig|6666666.148645.peg.1639
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148645.peg.291
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148645.peg.381
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148645.peg.1654
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148645.peg.1085
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148645.peg.1655
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148645.peg.7
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.148645.peg.1480
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148645.peg.1479
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.148645.peg.1278
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148645.peg.788
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148645.peg.1980
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.148645.peg.214
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148645.peg.1851
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.148645.peg.1993
Purine_Utilization	Xanthine permease	fig|6666666.148645.peg.2062
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.148645.peg.948
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148645.peg.162
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148645.peg.1492
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148645.peg.162
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.148645.peg.940
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.148645.peg.1059
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148645.peg.792
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.148645.peg.1426
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148645.peg.1303
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148645.peg.1303
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148645.peg.1367
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148645.peg.1058
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148645.peg.1357
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.148645.peg.115
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148645.peg.1748
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.512
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.1327
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148645.peg.2061
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148645.peg.1856
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148645.peg.797
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148645.peg.458
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148645.peg.1303
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148645.peg.1303
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148645.peg.1357
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148645.peg.1999
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148645.peg.2129
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148645.peg.1977
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148645.peg.607
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.148645.peg.658
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148645.peg.2037
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148645.peg.608
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.148645.peg.282
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.148645.peg.1267
Pyrimidine_utilization	Uracil permease	fig|6666666.148645.peg.795
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148645.peg.1334
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.148645.peg.772
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148645.peg.598
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148645.peg.71
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148645.peg.71
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.148645.peg.1608
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148645.peg.378
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.148645.peg.342
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148645.peg.878
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148645.peg.758
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.148645.peg.561
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148645.peg.4
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148645.peg.759
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.148645.peg.1419
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148645.peg.1273
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148645.peg.652
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148645.peg.1432
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.148645.peg.581
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148645.peg.845
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148645.peg.846
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148645.peg.451
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148645.peg.916
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148645.peg.1379
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148645.peg.268
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148645.peg.590
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.148645.peg.1714
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148645.peg.1998
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.148645.peg.1526
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148645.peg.1975
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148645.peg.2069
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148645.peg.126
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148645.peg.583
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148645.peg.1942
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.148645.peg.779
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148645.peg.927
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148645.peg.1104
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.148645.peg.250
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148645.peg.133
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148645.peg.132
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148645.peg.1005
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148645.peg.583
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148645.peg.1845
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148645.peg.1005
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148645.peg.1354
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.148645.peg.1243
RNA_modification_cluster	Protein YidD	fig|6666666.148645.peg.189
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148645.peg.190
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.148645.peg.1769
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148645.peg.1499
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148645.peg.1498
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.148645.peg.278
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148645.peg.625
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148645.peg.766
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.148645.peg.1625
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148645.peg.791
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148645.peg.365
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148645.peg.1116
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148645.peg.640
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148645.peg.1093
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148645.peg.452
RecA_and_RecX	RecA protein	fig|6666666.148645.peg.1001
RecA_and_RecX	Regulatory protein RecX	fig|6666666.148645.peg.148
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148645.peg.128
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148645.peg.1344
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148645.peg.854
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148645.peg.2037
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148645.peg.4
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148645.peg.1170
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148645.peg.47
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.148645.peg.1349
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148645.peg.499
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148645.peg.362
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148645.peg.308
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148645.peg.1523
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148645.peg.165
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148645.peg.1021
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148645.peg.1023
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148645.peg.1018
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148645.peg.1020
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148645.peg.431
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.148645.peg.1978
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148645.peg.1543
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148645.peg.811
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148645.peg.432
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148645.peg.433
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148645.peg.434
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148645.peg.1295
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148645.peg.146
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148645.peg.462
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148645.peg.146
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148645.peg.931
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148645.peg.1295
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148645.peg.931
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148645.peg.1112
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148645.peg.1295
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148645.peg.146
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148645.peg.462
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.148645.peg.274
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148645.peg.146
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.148645.peg.84
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148645.peg.931
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148645.peg.1295
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148645.peg.6
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148645.peg.931
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148645.peg.1112
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148645.peg.452
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148645.peg.1295
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148645.peg.146
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148645.peg.462
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.148645.peg.274
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148645.peg.146
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148645.peg.1295
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148645.peg.930
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148645.peg.165
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148645.peg.61
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148645.peg.1112
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148645.peg.391
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148645.peg.1260
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.148645.peg.1043
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.148645.peg.666
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148645.peg.1109
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148645.peg.1109
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148645.peg.798
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.148645.peg.623
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148645.peg.622
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148645.peg.141
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.148645.peg.1799
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148645.peg.528
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.148645.peg.1778
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.148645.peg.1501
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.148645.peg.1503
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.148645.peg.1520
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.148645.peg.1785
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.148645.peg.1777
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.148645.peg.1788
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.148645.peg.1768
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.148645.peg.1779
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.148645.peg.31
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148645.peg.1502
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.148645.peg.902
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.148645.peg.1575
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.148645.peg.1790
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.148645.peg.1793
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.148645.peg.1784
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.148645.peg.158
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.148645.peg.1574
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.148645.peg.1787
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.148645.peg.1792
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.148645.peg.1302
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.148645.peg.1302
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.148645.peg.1823
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.148645.peg.1823
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.148645.peg.1243
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.148645.peg.901
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.148645.peg.1773
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.148645.peg.1795
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.148645.peg.1794
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.148645.peg.1783
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.148645.peg.1780
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148645.peg.1500
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.148645.peg.1297
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.148645.peg.1796
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.148645.peg.1771
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.148645.peg.1799
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.148645.peg.1772
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.148645.peg.1782
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.148645.peg.1782
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.148645.peg.1619
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.148645.peg.2031
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.148645.peg.1786
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.148645.peg.1298
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.148645.peg.1298
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.148645.peg.1791
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.148645.peg.592
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.148645.peg.276
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.148645.peg.1509
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.148645.peg.1518
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.148645.peg.1789
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.148645.peg.1770
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.148645.peg.1778
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.148645.peg.1299
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.148645.peg.1798
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.148645.peg.1781
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.148645.peg.1519
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.148645.peg.1508
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.148645.peg.518
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148645.peg.1998
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.148645.peg.1526
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148645.peg.365
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148645.peg.1116
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148645.peg.1262
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148645.peg.528
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148645.peg.126
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148645.peg.640
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148645.peg.1072
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148645.peg.1942
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148645.peg.7
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.148645.peg.1764
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.148645.peg.1518
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.148645.peg.1517
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148645.peg.1765
Rubrerythrin	Rubrerythrin	fig|6666666.148645.peg.184
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.148645.peg.565
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.148645.peg.84
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.148645.peg.1040
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.148645.peg.1401
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.148645.peg.20
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148645.peg.1615
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148645.peg.1750
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.148645.peg.928
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148645.peg.607
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148645.peg.608
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.839
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.1245
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.1371
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.839
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.1245
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148645.peg.1371
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148645.peg.33
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.148645.peg.1333
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148645.peg.388
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148645.peg.388
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148645.peg.1853
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148645.peg.1854
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148645.peg.1686
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.148645.peg.1368
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148645.peg.157
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.148645.peg.1360
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.148645.peg.1298
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.148645.peg.1377
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.148645.peg.244
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148645.peg.23
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148645.peg.457
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148645.peg.2076
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148645.peg.367
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.148645.peg.1317
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.148645.peg.315
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.148645.peg.1673
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.148645.peg.1673
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.148645.peg.370
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148645.peg.371
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148645.peg.372
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148645.peg.1048
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.148645.peg.471
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148645.peg.1810
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148645.peg.371
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148645.peg.372
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148645.peg.457
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148645.peg.96
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148645.peg.983
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148645.peg.984
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148645.peg.983
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148645.peg.984
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.148645.peg.1797
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.148645.peg.1797
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148645.peg.2129
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.148645.peg.1761
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.148645.peg.2022
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.148645.peg.1438
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.148645.peg.2021
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.148645.peg.1760
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148645.peg.2020
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148645.peg.474
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148645.peg.1762
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148645.peg.1260
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.148645.peg.2019
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiH	fig|6666666.148645.peg.2018
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.148645.peg.1280
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.148645.peg.1279
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.148645.peg.252
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.148645.peg.1002
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148645.peg.270
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148645.peg.803
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.148645.peg.758
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148645.peg.759
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148645.peg.562
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148645.peg.1320
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.148645.peg.2103
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148645.peg.644
Tn552	Beta-lactamase (EC 3.5.2.6)	fig|6666666.148645.peg.690
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.148645.peg.448
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.148645.peg.1265
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1065
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.1264
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148645.peg.2099
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148645.peg.1068
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148645.peg.1266
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.148645.peg.844
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148645.peg.441
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148645.peg.1140
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148645.peg.1181
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148645.peg.1254
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148645.peg.1860
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148645.peg.240
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.148645.peg.1504
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.148645.peg.352
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.148645.peg.1557
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.148645.peg.241
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.148645.peg.1043
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.148645.peg.1638
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148645.peg.1300
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.148645.peg.780
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.148645.peg.1797
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.148645.peg.951
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148645.peg.611
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148645.peg.1322
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.148645.peg.1797
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.148645.peg.951
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.148645.peg.637
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148645.peg.611
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148645.peg.1322
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.148645.peg.1517
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.148645.peg.1506
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148645.peg.1865
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.148645.peg.961
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.148645.peg.1774
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.148645.peg.242
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.148645.peg.900
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.148645.peg.235
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148645.peg.1775
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.148645.peg.62
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.148645.peg.814
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.148645.peg.194
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148645.peg.2114
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148645.peg.157
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148645.peg.147
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.148645.peg.1764
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.148645.peg.1377
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148645.peg.113
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.148645.peg.2131
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148645.peg.1659
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148645.peg.349
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148645.peg.986
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148645.peg.13
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148645.peg.693
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148645.peg.1101
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148645.peg.1021
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148645.peg.1023
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148645.peg.1018
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148645.peg.1020
Type_VI_secretion_systems	ClpB protein	fig|6666666.148645.peg.788
Type_VI_secretion_systems	ClpB protein	fig|6666666.148645.peg.1980
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148645.peg.769
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148645.peg.544
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148645.peg.517
USS-DB-7	ClpB protein	fig|6666666.148645.peg.788
USS-DB-7	ClpB protein	fig|6666666.148645.peg.1980
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.148645.peg.39
Universal_GTPases	GTP-binding protein EngA	fig|6666666.148645.peg.2056
Universal_GTPases	GTP-binding protein EngB	fig|6666666.148645.peg.1544
Universal_GTPases	GTP-binding protein Era	fig|6666666.148645.peg.2055
Universal_GTPases	GTP-binding protein HflX	fig|6666666.148645.peg.1749
Universal_GTPases	GTP-binding protein Obg	fig|6666666.148645.peg.1060
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.148645.peg.1283
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148645.peg.1005
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.148645.peg.1763
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148645.peg.142
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148645.peg.783
Universal_GTPases	Translation elongation factor G	fig|6666666.148645.peg.1797
Universal_GTPases	Translation elongation factor LepA	fig|6666666.148645.peg.637
Universal_GTPases	Translation elongation factor Tu	fig|6666666.148645.peg.1506
Universal_GTPases	Translation initiation factor 2	fig|6666666.148645.peg.242
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148645.peg.1999
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148645.peg.1617
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.148645.peg.295
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148645.peg.973
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.148645.peg.226
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.148645.peg.1668
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.148645.peg.1669
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.148645.peg.1667
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.148645.peg.1670
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.148645.peg.1666
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.148645.peg.1671
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.148645.peg.1672
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148645.peg.757
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148645.peg.598
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148645.peg.753
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.148645.peg.2062
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148645.peg.2061
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.148645.peg.1067
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.148645.peg.188
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148645.peg.1072
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148645.peg.275
YjeE	NAD(P)HX dehydratase	fig|6666666.148645.peg.57
YjeE	NAD(P)HX epimerase	fig|6666666.148645.peg.57
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148645.peg.1072
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148645.peg.957
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.148645.peg.1308
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.148645.peg.1309
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.148645.peg.1312
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148645.peg.1307
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148645.peg.1117
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148645.peg.1310
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.148645.peg.1308
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.148645.peg.1309
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148645.peg.1307
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148645.peg.1311
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148645.peg.1856
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148645.peg.431
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148645.peg.432
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148645.peg.433
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148645.peg.434
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148645.peg.1613
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148645.peg.1110
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148645.peg.1005
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148645.peg.1845
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148645.peg.757
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148645.peg.815
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148645.peg.1694
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148645.peg.1094
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.148645.peg.253
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148645.peg.162
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148645.peg.1492
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148645.peg.162
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.148645.peg.1355
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148645.peg.25
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.148645.peg.1292
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.512
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148645.peg.1327
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148645.peg.803
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.148645.peg.959
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148645.peg.1971
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148645.peg.1097
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148645.peg.258
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148645.peg.1645
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148645.peg.1295
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148645.peg.931
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148645.peg.931
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148645.peg.1112
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148645.peg.963
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.148645.peg.963
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.254
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148645.peg.1433
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148645.peg.1369
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148645.peg.914
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148645.peg.882
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148645.peg.634
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.148645.peg.249
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.148645.peg.790
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.148645.peg.144
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148645.peg.1741
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.148645.peg.1814
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148645.peg.428
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148645.peg.2078
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.148645.peg.1973
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.148645.peg.390
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.148645.peg.1054
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.148645.peg.513
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.148645.peg.160
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.148645.peg.1635
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.148645.peg.85
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.148645.peg.1935
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.148645.peg.925
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148645.peg.1573
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.148645.peg.899
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.148645.peg.1996
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.148645.peg.247
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.148645.peg.801
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148645.peg.1613
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148645.peg.1110
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148645.peg.25
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.148645.peg.357
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.148645.peg.1954
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148645.peg.1273
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148645.peg.1005
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148645.peg.245
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.148645.peg.244
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.148645.peg.246
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148645.peg.1998
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.148645.peg.581
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148645.peg.845
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148645.peg.846
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148645.peg.451
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148645.peg.916
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148645.peg.1615
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148645.peg.1750
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148645.peg.1942
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148645.peg.927
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148645.peg.1104
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.148645.peg.17
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148645.peg.1358
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148645.peg.1553
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148645.peg.1093
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148645.peg.452
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148645.peg.1845
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148645.peg.1956
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148645.peg.1379
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148645.peg.882
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148645.peg.1107
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148645.peg.1049
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148645.peg.190
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.148645.peg.1106
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148645.peg.1358
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148645.peg.1553
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148645.peg.1093
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148645.peg.452
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148645.peg.1956
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148645.peg.882
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148645.peg.1107
tRNAs	tRNA-Ala-GGC	fig|6666666.148645.rna.33
tRNAs	tRNA-Arg-ACG	fig|6666666.148645.rna.27
tRNAs	tRNA-Arg-ACG	fig|6666666.148645.rna.28
tRNAs	tRNA-Arg-CCG	fig|6666666.148645.rna.39
tRNAs	tRNA-Cys-GCA	fig|6666666.148645.rna.65
tRNAs	tRNA-Gly-CCC	fig|6666666.148645.rna.36
tRNAs	tRNA-Gly-GCC	fig|6666666.148645.rna.41
tRNAs	tRNA-Gly-GCC	fig|6666666.148645.rna.64
tRNAs	tRNA-Leu-CAA	fig|6666666.148645.rna.40
tRNAs	tRNA-Leu-CAG	fig|6666666.148645.rna.63
tRNAs	tRNA-Leu-GAG	fig|6666666.148645.rna.62
tRNAs	tRNA-Phe-GAA	fig|6666666.148645.rna.31
tRNAs	tRNA-Pro-CGG	fig|6666666.148645.rna.60
tRNAs	tRNA-Pro-GGG	fig|6666666.148645.rna.25
tRNAs	tRNA-Ser-GGA	fig|6666666.148645.rna.37
tRNAs	tRNA-Trp-CCA	fig|6666666.148645.rna.46
