16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148646.peg.765
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.148646.peg.766
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148646.peg.840
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.148646.peg.767
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.148646.peg.1343
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148646.peg.1484
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148646.peg.688
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148646.peg.1573
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148646.peg.1119
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148646.peg.788
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148646.peg.1910
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148646.peg.1906
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148646.peg.720
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148646.peg.844
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148646.peg.1257
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148646.peg.1075
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148646.peg.1417
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148646.peg.956
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148646.peg.70
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.190
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.221
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.932
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.961
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.1256
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.1342
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.1783
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.1827
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148646.peg.1975
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148646.peg.1017
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148646.peg.35
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.148646.peg.1515
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148646.peg.1216
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148646.peg.1698
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148646.peg.692
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148646.peg.691
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148646.peg.692
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148646.peg.678
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148646.peg.687
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148646.peg.688
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148646.peg.690
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148646.peg.1094
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148646.peg.689
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148646.peg.1095
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148646.peg.403
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.643
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.777
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148646.peg.403
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.148646.peg.348
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.148646.peg.349
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.148646.peg.350
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.148646.peg.351
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.148646.peg.352
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.148646.peg.345
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.148646.peg.346
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.148646.peg.708
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148646.peg.453
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148646.peg.1271
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148646.peg.1967
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.148646.peg.828
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1477
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1479
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148646.peg.201
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148646.peg.515
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148646.peg.688
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1102
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1665
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148646.peg.1102
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148646.peg.1665
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148646.peg.1102
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148646.peg.252
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148646.peg.252
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148646.peg.82
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148646.peg.252
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148646.peg.1675
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148646.peg.83
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148646.peg.1677
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.148646.peg.846
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148646.peg.1761
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148646.peg.1760
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148646.peg.404
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148646.peg.1048
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.148646.peg.757
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148646.peg.1070
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148646.peg.1091
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148646.peg.765
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.148646.peg.1407
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.148646.peg.766
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.148646.peg.758
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.148646.peg.761
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.148646.peg.876
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148646.peg.756
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.148646.peg.1067
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.148646.peg.1083
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148646.peg.84
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148646.peg.665
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.148646.peg.923
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.148646.peg.843
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.148646.peg.842
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.148646.peg.841
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.148646.peg.1745
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.148646.peg.1318
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148646.peg.75
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.148646.peg.767
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148646.peg.1048
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.148646.peg.757
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148646.peg.765
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.148646.peg.1407
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.148646.peg.766
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.148646.peg.758
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.148646.peg.761
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148646.peg.756
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148646.peg.84
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148646.peg.85
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.148646.peg.843
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.148646.peg.842
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.148646.peg.841
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.148646.peg.839
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.148646.peg.1745
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.148646.peg.1318
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.148646.peg.84
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.148646.peg.85
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.148646.peg.1407
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148646.peg.4
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148646.peg.183
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148646.peg.1084
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.148646.peg.1234
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148646.peg.1096
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148646.peg.1001
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.148646.peg.206
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148646.peg.840
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.148646.peg.843
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.148646.peg.842
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.148646.peg.841
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.148646.peg.839
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.148646.peg.1745
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.148646.peg.1318
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.148646.peg.354
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.148646.peg.354
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148646.peg.704
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148646.peg.75
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148646.peg.719
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148646.peg.1045
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148646.peg.497
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148646.peg.1243
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148646.peg.304
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148646.peg.624
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148646.peg.1682
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.148646.peg.1683
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.148646.peg.1390
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.148646.peg.1389
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.148646.peg.566
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148646.peg.1433
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148646.peg.165
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148646.peg.366
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148646.peg.1828
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148646.peg.497
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148646.peg.1243
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148646.peg.1682
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.148646.peg.1683
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.148646.peg.1390
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.148646.peg.1389
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.148646.peg.566
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148646.peg.1214
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148646.peg.165
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148646.peg.497
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148646.peg.1243
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148646.peg.304
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148646.peg.624
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148646.peg.1682
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.148646.peg.1683
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.148646.peg.1390
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.148646.peg.1389
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.148646.peg.566
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148646.peg.1433
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148646.peg.1214
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148646.peg.165
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148646.peg.366
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148646.peg.1828
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148646.peg.702
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.148646.peg.23
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.148646.peg.985
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148646.peg.879
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.148646.peg.1107
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.148646.peg.1922
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.148646.peg.1921
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148646.peg.826
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148646.peg.1320
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148646.peg.1411
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148646.peg.1111
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148646.peg.1412
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148646.peg.1675
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148646.peg.255
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148646.peg.1132
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.148646.peg.391
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.148646.peg.1261
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.148646.peg.1261
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148646.peg.880
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148646.peg.1308
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148646.peg.406
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.148646.peg.1515
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148646.peg.1216
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148646.peg.103
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148646.peg.1137
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.148646.peg.1138
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.148646.peg.1139
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148646.peg.962
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148646.peg.1202
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.148646.peg.963
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.148646.peg.964
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148646.peg.539
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.148646.peg.693
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148646.peg.1006
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148646.peg.1137
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148646.peg.1866
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148646.peg.1137
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148646.peg.1866
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.148646.peg.922
CBSS-296591.1.peg.2330	NAD-dependent epimerase/dehydratase family protein	fig|6666666.148646.peg.1632
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148646.peg.1885
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148646.peg.324
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148646.peg.1592
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.148646.peg.1860
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.148646.peg.1859
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148646.peg.1582
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.148646.peg.1328
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148646.peg.1021
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148646.peg.1080
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148646.peg.556
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148646.peg.782
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.148646.peg.1071
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148646.peg.403
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148646.peg.403
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.148646.peg.1540
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148646.peg.131
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.148646.peg.130
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148646.peg.1065
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.148646.peg.1870
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148646.peg.1920
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148646.peg.87
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148646.peg.1867
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148646.peg.1320
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.507
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.814
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.1218
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.1815
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148646.peg.749
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148646.peg.665
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.148646.peg.822
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.148646.peg.842
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.148646.peg.841
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.148646.peg.1745
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148646.peg.855
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148646.peg.1436
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148646.peg.249
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.148646.peg.668
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148646.peg.392
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148646.peg.1271
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.148646.peg.1587
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.424
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.1023
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.148646.peg.1441
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148646.peg.133
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.148646.peg.938
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148646.peg.650
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148646.peg.1326
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148646.peg.765
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148646.peg.840
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148646.peg.1186
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.148646.peg.1870
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148646.peg.1271
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148646.peg.865
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148646.peg.323
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148646.peg.201
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148646.peg.515
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148646.peg.898
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148646.peg.183
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148646.peg.106
CO2_uptake,_carboxysome	High-affnity carbon uptake protein Hat/HatR	fig|6666666.148646.peg.1625
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148646.peg.340
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148646.peg.339
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.148646.peg.341
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.148646.peg.282
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148646.peg.283
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148646.peg.1110
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148646.peg.1267
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148646.peg.941
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148646.peg.1553
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148646.peg.1274
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148646.peg.1439
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.148646.peg.1273
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148646.peg.57
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.66
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1062
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1103
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148646.peg.255
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148646.peg.1132
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.148646.peg.1988
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148646.peg.14
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148646.peg.742
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.148646.peg.436
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.148646.peg.454
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.148646.peg.455
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148646.peg.326
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.148646.peg.1361
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1102
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1665
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148646.peg.1102
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.148646.peg.1703
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148646.peg.84
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148646.peg.85
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148646.peg.833
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148646.peg.1043
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148646.peg.1485
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.148646.peg.191
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148646.peg.1835
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.148646.peg.283
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.148646.peg.1744
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.148646.peg.1177
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148646.peg.1176
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148646.peg.1143
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148646.peg.1659
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148646.peg.1048
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148646.peg.1070
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148646.peg.1091
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148646.peg.1109
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148646.peg.1206
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148646.peg.1207
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.148646.peg.1135
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.148646.peg.1249
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148646.peg.159
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148646.peg.1074
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148646.peg.457
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148646.peg.1120
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148646.peg.236
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148646.peg.474
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148646.peg.1042
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148646.peg.237
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148646.peg.545
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.148646.peg.1540
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148646.peg.182
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148646.peg.1303
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148646.peg.182
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148646.peg.911
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148646.peg.487
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148646.peg.281
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148646.peg.137
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148646.peg.484
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148646.peg.1169
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148646.peg.485
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148646.peg.386
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148646.peg.1165
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148646.peg.1169
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148646.peg.1170
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148646.peg.1170
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148646.peg.1165
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148646.peg.279
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148646.peg.277
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148646.peg.280
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148646.peg.1712
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148646.peg.486
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148646.peg.1755
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148646.peg.296
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148646.peg.1506
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.148646.peg.1691
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148646.peg.296
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148646.peg.1506
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148646.peg.855
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.148646.peg.179
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148646.peg.753
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148646.peg.718
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.148646.peg.389
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148646.peg.384
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148646.peg.428
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148646.peg.1866
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.148646.peg.1487
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.148646.peg.1487
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148646.peg.753
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148646.peg.718
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.148646.peg.1747
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148646.peg.384
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148646.peg.428
Coenzyme_B12_biosynthesis	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	fig|6666666.148646.peg.1732
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148646.peg.487
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148646.peg.281
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148646.peg.137
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148646.peg.484
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148646.peg.1169
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148646.peg.485
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148646.peg.386
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148646.peg.1165
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148646.peg.1169
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148646.peg.1170
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148646.peg.1170
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.148646.peg.1166
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.148646.peg.1166
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148646.peg.1165
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148646.peg.279
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148646.peg.277
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148646.peg.280
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148646.peg.1712
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148646.peg.486
Coenzyme_B12_biosynthesis	Predicted cobalt transporter in Bacteroides_Porphyromonas	fig|6666666.148646.peg.857
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148646.peg.1755
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.148646.peg.1756
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148646.peg.1734
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148646.peg.1757
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148646.peg.794
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.148646.peg.198
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148646.peg.1008
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.148646.peg.546
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.148646.peg.1619
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.148646.peg.1357
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148646.peg.1303
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148646.peg.580
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148646.peg.506
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148646.peg.581
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148646.peg.622
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148646.peg.583
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148646.peg.584
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148646.peg.585
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148646.peg.586
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148646.peg.587
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148646.peg.588
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148646.peg.590
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148646.peg.591
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148646.peg.592
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148646.peg.593
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148646.peg.577
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148646.peg.576
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148646.peg.578
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148646.peg.620
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148646.peg.4
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148646.peg.1950
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.148646.peg.143
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148646.peg.898
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148646.peg.183
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148646.peg.1966
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148646.peg.1570
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148646.peg.1439
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.148646.peg.1234
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148646.peg.1096
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148646.peg.1001
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148646.peg.1464
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.148646.peg.1251
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148646.peg.1412
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148646.peg.1412
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.148646.peg.21
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.148646.peg.1989
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.424
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.1023
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.148646.peg.445
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1477
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1479
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1477
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1479
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148646.peg.1274
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.148646.peg.668
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.148646.peg.1794
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.148646.peg.1251
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148646.peg.1496
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.148646.peg.1339
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148646.peg.833
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148646.peg.1043
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.148646.peg.247
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.148646.peg.175
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.148646.peg.1857
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.148646.peg.1660
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148646.peg.826
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.148646.peg.1081
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.148646.peg.1151
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.148646.peg.206
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.148646.peg.1489
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.148646.peg.1026
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148646.peg.733
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148646.peg.873
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148646.peg.11
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148646.peg.392
DNA_repair,_bacterial	RecA protein	fig|6666666.148646.peg.194
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.148646.peg.1024
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.148646.peg.969
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.148646.peg.1534
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.148646.peg.684
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.148646.peg.1852
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148646.peg.1140
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.148646.peg.973
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.148646.peg.1829
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.148646.peg.191
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.148646.peg.1942
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.148646.peg.194
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.148646.peg.666
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.148646.peg.1024
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148646.peg.1496
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148646.peg.249
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.148646.peg.1534
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.148646.peg.1002
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.148646.peg.194
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.148646.peg.1215
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148646.peg.1966
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.148646.peg.1703
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148646.peg.833
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148646.peg.1043
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148646.peg.1485
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.148646.peg.191
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148646.peg.1207
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.148646.peg.192
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.148646.peg.105
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.148646.peg.663
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148646.peg.1950
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148646.peg.1039
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	fig|6666666.148646.peg.570
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148646.peg.833
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148646.peg.1043
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148646.peg.1393
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148646.peg.1867
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148646.peg.728
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.148646.peg.284
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.148646.peg.844
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.148646.peg.655
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.148646.peg.1327
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.148646.peg.1305
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148646.peg.844
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.148646.peg.1516
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.148646.peg.1938
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.148646.peg.1938
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148646.peg.1257
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148646.peg.1698
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.148646.peg.1877
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.148646.peg.1876
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148646.peg.286
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148646.peg.285
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.148646.peg.20
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148646.peg.145
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148646.peg.676
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.148646.peg.677
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.148646.peg.821
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148646.peg.1514
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.148646.peg.731
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148646.peg.1953
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.148646.peg.1663
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.643
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.777
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.148646.peg.1178
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.148646.peg.1150
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148646.peg.1677
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148646.peg.89
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148646.peg.292
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148646.peg.1568
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.148646.peg.850
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148646.peg.91
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148646.peg.972
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.148646.peg.1824
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148646.peg.1013
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148646.peg.941
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148646.peg.1553
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148646.peg.95
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.148646.peg.693
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148646.peg.694
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148646.peg.113
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148646.peg.816
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148646.peg.1030
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148646.peg.1956
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148646.peg.1512
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148646.peg.539
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.148646.peg.1259
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.148646.peg.924
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.148646.peg.1258
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.148646.peg.1348
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.148646.peg.859
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.148646.peg.88
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148646.peg.693
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148646.peg.694
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.148646.peg.693
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.148646.peg.1171
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148646.peg.694
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.148646.peg.716
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148646.peg.749
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.148646.peg.716
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148646.peg.765
Flavodoxin	Flavodoxin	fig|6666666.148646.peg.725
Flavodoxin	Flavodoxin 1	fig|6666666.148646.peg.1480
Flavodoxin	Flavodoxin 2	fig|6666666.148646.peg.1817
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.148646.peg.1817
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148646.peg.199
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148646.peg.881
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148646.peg.1484
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148646.peg.236
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148646.peg.1573
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.148646.peg.419
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148646.peg.1692
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148646.peg.355
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.148646.peg.419
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148646.peg.59
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148646.peg.474
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148646.peg.1042
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148646.peg.237
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148646.peg.1574
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148646.peg.199
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148646.peg.881
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148646.peg.718
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148646.peg.1070
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148646.peg.1091
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148646.peg.1692
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148646.peg.355
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148646.peg.59
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148646.peg.1109
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148646.peg.384
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148646.peg.159
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148646.peg.1523
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.148646.peg.469
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148646.peg.752
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148646.peg.752
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148646.peg.1523
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148646.peg.1
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148646.peg.1752
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.148646.peg.1880
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.148646.peg.1722
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148646.peg.533
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148646.peg.794
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.148646.peg.1016
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148646.peg.483
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148646.peg.144
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.148646.peg.943
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148646.peg.533
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148646.peg.1960
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1477
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1479
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148646.peg.1051
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148646.peg.387
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148646.peg.535
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148646.peg.381
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148646.peg.1075
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148646.peg.387
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148646.peg.323
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148646.peg.463
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1477
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1479
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.148646.peg.1328
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148646.peg.1142
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148646.peg.1522
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148646.peg.1522
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148646.peg.464
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.135
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.272
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.1741
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148646.peg.1075
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148646.peg.1920
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148646.peg.323
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148646.peg.1119
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.148646.peg.1328
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148646.peg.1142
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148646.peg.1021
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148646.peg.1080
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148646.peg.739
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148646.peg.1793
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.174
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.632
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.1085
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.1351
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148646.peg.1784
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.148646.peg.1550
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148646.peg.1051
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.148646.peg.1824
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148646.peg.1110
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148646.peg.1267
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148646.peg.1013
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148646.peg.646
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148646.peg.941
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148646.peg.1553
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148646.peg.95
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.148646.peg.1209
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148646.peg.231
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148646.peg.57
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.148646.peg.1824
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148646.peg.646
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148646.peg.1553
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148646.peg.95
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148646.peg.231
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148646.peg.57
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.148646.peg.1942
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.148646.peg.923
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148646.peg.902
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.424
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.1023
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148646.peg.133
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148646.peg.1627
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.148646.peg.1247
GroEL_GroES	Chaperone protein DnaK	fig|6666666.148646.peg.513
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.148646.peg.124
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.148646.peg.123
GroEL_GroES	Heat shock protein GrpE	fig|6666666.148646.peg.1248
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.148646.peg.1247
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.148646.peg.513
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.148646.peg.1248
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148646.peg.382
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148646.peg.1431
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148646.peg.911
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148646.peg.68
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148646.peg.1207
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.148646.peg.542
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.148646.peg.1343
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148646.peg.320
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.148646.peg.408
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148646.peg.689
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148646.peg.1095
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.66
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1062
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1103
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.148646.peg.99
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148646.peg.330
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148646.peg.382
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.148646.peg.908
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.66
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1062
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1103
Hfl_operon	GTP-binding protein HflX	fig|6666666.148646.peg.1452
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148646.peg.1453
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148646.peg.1906
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.148646.peg.1911
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.148646.peg.1907
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.148646.peg.1469
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.148646.peg.1341
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148646.peg.904
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148646.peg.1325
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148646.peg.1431
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.148646.peg.1235
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.148646.peg.1234
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148646.peg.1761
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148646.peg.1760
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.148646.peg.1079
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148646.peg.1950
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
Inteins	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148646.peg.734
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148646.peg.661
Inteins	Translation initiation factor 2	fig|6666666.148646.peg.985
Inteins	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148646.peg.369
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148646.peg.1271
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148646.peg.1967
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.148646.peg.456
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148646.peg.982
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.148646.peg.983
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.148646.peg.981
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.148646.peg.1246
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.148646.peg.909
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.148646.peg.1927
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148646.peg.692
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148646.peg.453
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148646.peg.688
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1102
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1665
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148646.peg.650
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148646.peg.1233
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148646.peg.1326
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148646.peg.1725
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148646.peg.874
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148646.peg.35
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148646.peg.42
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148646.peg.1102
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148646.peg.1665
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148646.peg.1186
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1102
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1665
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1102
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1665
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148646.peg.1102
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148646.peg.1665
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148646.peg.1102
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148646.peg.1665
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148646.peg.1186
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148646.peg.1017
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.148646.peg.1746
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148646.peg.329
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.148646.peg.1816
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148646.peg.1511
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.148646.peg.1525
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.148646.peg.319
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148646.peg.905
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.148646.peg.61
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148646.peg.14
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148646.peg.742
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.148646.peg.71
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148646.peg.1245
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148646.peg.1513
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.148646.peg.649
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.148646.peg.947
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.148646.peg.1454
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148646.peg.269
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148646.peg.1320
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148646.peg.1411
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148646.peg.329
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.148646.peg.1843
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.148646.peg.1845
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148646.peg.1844
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148646.peg.1842
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.148646.peg.1847
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.148646.peg.1846
Lactate_utilization	L-lactate permease	fig|6666666.148646.peg.808
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.148646.peg.270
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148646.peg.269
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.148646.peg.268
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148646.peg.1885
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148646.peg.1402
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148646.peg.1523
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148646.peg.1
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148646.peg.1752
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.148646.peg.1403
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148646.peg.1885
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148646.peg.1
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148646.peg.1752
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148646.peg.106
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148646.peg.453
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148646.peg.453
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148646.peg.1119
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148646.peg.369
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.148646.peg.411
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148646.peg.813
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.148646.peg.411
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148646.peg.813
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148646.peg.21
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148646.peg.1436
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.148646.peg.1122
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.148646.peg.1542
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.148646.peg.22
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148646.peg.1512
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148646.peg.1511
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148646.peg.905
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148646.peg.1183
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148646.peg.1184
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148646.peg.1185
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148646.peg.1282
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148646.peg.1245
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148646.peg.1513
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.148646.peg.1025
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.148646.peg.1025
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148646.peg.1704
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148646.peg.1669
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148646.peg.164
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148646.peg.769
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.148646.peg.1066
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148646.peg.1065
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148646.peg.1123
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148646.peg.1704
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148646.peg.1669
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148646.peg.164
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148646.peg.769
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.148646.peg.1066
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148646.peg.1065
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148646.peg.1123
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148646.peg.685
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148646.peg.686
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148646.peg.682
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.148646.peg.681
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.148646.peg.679
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148646.peg.691
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148646.peg.692
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.148646.peg.680
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148646.peg.678
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148646.peg.687
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148646.peg.688
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148646.peg.690
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148646.peg.1094
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148646.peg.689
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148646.peg.1095
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148646.peg.685
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148646.peg.686
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148646.peg.682
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148646.peg.286
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148646.peg.285
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.507
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.814
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.1218
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148646.peg.1815
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148646.peg.749
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.148646.peg.1851
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.148646.peg.755
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148646.peg.1001
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.424
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.1023
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.148646.peg.1988
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.148646.peg.92
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.174
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.632
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.1085
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148646.peg.1351
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148646.peg.1402
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148646.peg.2
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148646.peg.1548
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148646.peg.1784
Maltose_and_Maltodextrin_Utilization	Maltodextrin glucosidase (EC 3.2.1.20)	fig|6666666.148646.peg.1037
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148646.peg.1050
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148646.peg.7
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148646.peg.989
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148646.peg.991
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148646.peg.1307
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.148646.peg.1082
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.148646.peg.1228
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.148646.peg.415
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.148646.peg.704
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148646.peg.1523
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148646.peg.1304
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148646.peg.865
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148646.peg.764
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148646.peg.708
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148646.peg.717
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148646.peg.118
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148646.peg.403
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148646.peg.1576
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148646.peg.404
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.148646.peg.1889
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148646.peg.305
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148646.peg.403
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148646.peg.1576
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148646.peg.404
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148646.peg.403
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148646.peg.1960
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148646.peg.76
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148646.peg.227
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148646.peg.320
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.148646.peg.446
Multidrug_Resistance_Efflux_Pumps	Membrane fusion protein of RND family multidrug efflux pump	fig|6666666.148646.peg.295
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148646.peg.300
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148646.peg.1708
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.148646.peg.721
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148646.peg.865
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148646.peg.87
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148646.peg.257
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148646.peg.1841
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148646.peg.1840
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.148646.peg.208
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.148646.peg.209
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.148646.peg.210
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.148646.peg.1616
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.148646.peg.1615
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.148646.peg.1614
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.148646.peg.1848
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148646.peg.342
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148646.peg.343
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148646.peg.344
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148646.peg.1074
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148646.peg.1885
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148646.peg.1002
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148646.peg.1002
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.148646.peg.287
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148646.peg.342
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.148646.peg.62
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.148646.peg.287
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148646.peg.1765
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148646.peg.1499
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.148646.peg.1500
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148646.peg.343
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148646.peg.344
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.148646.peg.1928
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.148646.peg.1933
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.148646.peg.1932
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.148646.peg.1931
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.148646.peg.1929
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.148646.peg.1930
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.148646.peg.1061
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.148646.peg.1060
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.148646.peg.1059
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.148646.peg.1058
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.148646.peg.1057
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.148646.peg.1056
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.148646.peg.1422
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.148646.peg.1420
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148646.peg.1419
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148646.peg.1423
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.148646.peg.1465
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148646.peg.1765
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.148646.peg.1821
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148646.peg.1820
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148646.peg.884
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.148646.peg.262
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.148646.peg.205
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148646.peg.650
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148646.peg.1233
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148646.peg.1326
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148646.peg.1725
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148646.peg.874
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148646.peg.35
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148646.peg.42
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.148646.peg.1044
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148646.peg.1325
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148646.peg.987
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.148646.peg.23
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.148646.peg.986
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.148646.peg.985
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148646.peg.1484
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148646.peg.788
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148646.peg.1910
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.148646.peg.720
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148646.peg.720
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.148646.peg.1528
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.148646.peg.1025
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.148646.peg.1528
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148646.peg.884
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.148646.peg.1528
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.148646.peg.1721
Oxidative_stress	Rubrerythrin	fig|6666666.148646.peg.1182
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148646.peg.336
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148646.peg.337
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148646.peg.1838
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148646.peg.1274
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148646.peg.1698
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148646.peg.1439
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.148646.peg.469
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.148646.peg.1273
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148646.peg.1689
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148646.peg.1689
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148646.peg.765
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148646.peg.1973
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148646.peg.865
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148646.peg.483
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148646.peg.1111
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148646.peg.840
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.148646.peg.763
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.148646.peg.839
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148646.peg.811
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148646.peg.648
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148646.peg.760
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148646.peg.759
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148646.peg.762
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148646.peg.764
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148646.peg.708
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148646.peg.717
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148646.peg.1973
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148646.peg.759
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148646.peg.762
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148646.peg.764
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148646.peg.708
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148646.peg.717
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.148646.peg.477
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148646.peg.478
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148646.peg.480
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148646.peg.1356
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148646.peg.972
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.148646.peg.750
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148646.peg.1183
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148646.peg.1184
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148646.peg.972
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148646.peg.1045
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.148646.peg.1296
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.148646.peg.1079
Phage_replication	Phage DNA replication protein	fig|6666666.148646.peg.1293
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.148646.peg.198
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148646.peg.128
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148646.peg.202
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.148646.peg.1630
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148646.peg.1015
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148646.peg.798
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148646.peg.799
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.148646.peg.800
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148646.peg.1453
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.148646.peg.790
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.148646.peg.1640
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148646.peg.137
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148646.peg.484
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148646.peg.95
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148646.peg.323
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148646.peg.1119
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1477
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148646.peg.1479
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.148646.peg.1328
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148646.peg.1142
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148646.peg.1051
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148646.peg.1075
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148646.peg.84
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148646.peg.85
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148646.peg.483
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148646.peg.1084
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148646.peg.1117
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148646.peg.403
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148646.peg.82
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.148646.peg.74
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148646.peg.83
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148646.peg.692
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148646.peg.691
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148646.peg.692
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148646.peg.678
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148646.peg.678
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148646.peg.687
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148646.peg.1015
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148646.peg.1453
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1102
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148646.peg.1665
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148646.peg.1102
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148646.peg.1665
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148646.peg.1186
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148646.peg.478
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148646.peg.480
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148646.peg.1356
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.148646.peg.796
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148646.peg.1235
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148646.peg.1235
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148646.peg.147
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148646.peg.1234
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148646.peg.1234
Potassium_homeostasis	cAMP-dependent Kef-type K+ transport system	fig|6666666.148646.peg.1428
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.148646.peg.367
Programmed_frameshift	programmed frameshift-containing	fig|6666666.148646.peg.367
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148646.peg.1675
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148646.peg.694
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148646.peg.1419
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148646.peg.1423
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.148646.peg.1418
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.148646.peg.1373
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148646.peg.884
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.148646.peg.1247
Protein_chaperones	Chaperone protein DnaK	fig|6666666.148646.peg.513
Protein_chaperones	Chaperone protein HtpG	fig|6666666.148646.peg.1072
Protein_chaperones	ClpB protein	fig|6666666.148646.peg.724
Protein_chaperones	ClpB protein	fig|6666666.148646.peg.1565
Protein_chaperones	Heat shock protein GrpE	fig|6666666.148646.peg.1248
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148646.peg.1411
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148646.peg.1429
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148646.peg.1788
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148646.peg.1789
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148646.peg.1946
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148646.peg.1709
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.148646.peg.974
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148646.peg.975
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.148646.peg.54
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148646.peg.724
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148646.peg.1565
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.148646.peg.1151
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148646.peg.1665
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.148646.peg.1684
Purine_Utilization	Xanthine permease	fig|6666666.148646.peg.917
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.148646.peg.36
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148646.peg.962
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148646.peg.1202
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148646.peg.1202
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.148646.peg.1330
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.148646.peg.1108
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148646.peg.728
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.148646.peg.418
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148646.peg.752
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148646.peg.752
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148646.peg.131
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148646.peg.1109
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148646.peg.121
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.148646.peg.101
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148646.peg.1453
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.643
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.777
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148646.peg.918
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148646.peg.1670
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148646.peg.733
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148646.peg.873
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148646.peg.752
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148646.peg.752
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148646.peg.121
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148646.peg.1689
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148646.peg.1233
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148646.peg.1568
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148646.peg.463
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.148646.peg.525
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148646.peg.941
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148646.peg.464
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.148646.peg.993
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.148646.peg.63
Pyrimidine_utilization	Uracil permease	fig|6666666.148646.peg.731
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148646.peg.305
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.148646.peg.708
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148646.peg.453
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148646.peg.1522
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148646.peg.1522
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.148646.peg.1276
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.148646.peg.1554
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148646.peg.231
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148646.peg.693
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.148646.peg.795
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148646.peg.1706
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148646.peg.694
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.148646.peg.377
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148646.peg.59
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148646.peg.423
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148646.peg.530
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.148646.peg.1145
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148646.peg.265
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148646.peg.264
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148646.peg.880
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148646.peg.1308
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148646.peg.406
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148646.peg.1008
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148646.peg.1137
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.148646.peg.1490
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148646.peg.1688
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.148646.peg.1870
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148646.peg.1570
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148646.peg.911
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148646.peg.91
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148646.peg.1143
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148646.peg.146
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.148646.peg.715
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148646.peg.1317
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148646.peg.1961
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.148646.peg.1027
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148646.peg.84
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148646.peg.85
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148646.peg.1835
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148646.peg.1143
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148646.peg.1659
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148646.peg.1835
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148646.peg.283
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.148646.peg.1744
RNA_modification_cluster	Protein YidD	fig|6666666.148646.peg.1177
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148646.peg.1176
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.148646.peg.1586
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148646.peg.1841
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148646.peg.1840
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.148646.peg.999
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148646.peg.665
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148646.peg.702
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.148646.peg.1260
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148646.peg.727
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148646.peg.1046
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148646.peg.1972
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148646.peg.538
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148646.peg.1949
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148646.peg.879
RecA_and_RecX	RecA protein	fig|6666666.148646.peg.194
RecA_and_RecX	Regulatory protein RecX	fig|6666666.148646.peg.1215
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148646.peg.89
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148646.peg.292
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148646.peg.257
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148646.peg.941
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148646.peg.1706
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148646.peg.1765
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148646.peg.1499
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.148646.peg.288
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148646.peg.833
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148646.peg.1043
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148646.peg.1393
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148646.peg.1867
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148646.peg.1197
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148646.peg.1198
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148646.peg.327
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.148646.peg.1567
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148646.peg.1885
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148646.peg.370
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148646.peg.326
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148646.peg.325
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148646.peg.324
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148646.peg.744
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148646.peg.1217
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148646.peg.869
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148646.peg.1217
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148646.peg.1321
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148646.peg.744
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148646.peg.1321
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148646.peg.1969
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148646.peg.744
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148646.peg.1217
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148646.peg.869
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.148646.peg.1002
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148646.peg.1217
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.148646.peg.1535
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148646.peg.1321
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148646.peg.744
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148646.peg.300
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148646.peg.1708
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148646.peg.1321
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148646.peg.1969
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148646.peg.879
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148646.peg.744
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148646.peg.1217
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148646.peg.869
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.148646.peg.1002
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148646.peg.1217
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148646.peg.744
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148646.peg.1320
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148646.peg.1197
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148646.peg.1198
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148646.peg.1514
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148646.peg.1969
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148646.peg.1439
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148646.peg.70
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.148646.peg.1124
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.148646.peg.519
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148646.peg.1966
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148646.peg.1966
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148646.peg.734
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.148646.peg.662
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148646.peg.661
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148646.peg.76
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.148646.peg.1616
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148646.peg.657
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.148646.peg.1595
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.148646.peg.1843
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.148646.peg.1845
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.148646.peg.1862
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.148646.peg.1602
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.148646.peg.1594
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.148646.peg.1605
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.148646.peg.1585
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.148646.peg.1596
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.148646.peg.1078
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148646.peg.1844
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.148646.peg.208
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.148646.peg.1922
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.148646.peg.1607
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.148646.peg.1610
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.148646.peg.1601
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.148646.peg.1205
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.148646.peg.1921
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.148646.peg.1639
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.148646.peg.1604
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.148646.peg.1609
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.148646.peg.751
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.148646.peg.751
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.148646.peg.925
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.148646.peg.1638
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.148646.peg.1638
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.148646.peg.1744
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.148646.peg.209
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.148646.peg.1590
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.148646.peg.1612
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.148646.peg.1611
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.148646.peg.1600
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.148646.peg.1597
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148646.peg.1842
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.148646.peg.746
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.148646.peg.1613
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.148646.peg.1588
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.148646.peg.1616
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.148646.peg.1589
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.148646.peg.1599
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.148646.peg.1599
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.148646.peg.1265
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.148646.peg.947
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.148646.peg.1603
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.148646.peg.747
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.148646.peg.747
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.148646.peg.1608
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.148646.peg.1135
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.148646.peg.1000
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.148646.peg.1851
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.148646.peg.1860
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.148646.peg.1606
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.148646.peg.1587
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.148646.peg.1595
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.148646.peg.748
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.148646.peg.1615
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.148646.peg.1598
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.148646.peg.1861
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.148646.peg.1850
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.148646.peg.649
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148646.peg.1688
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.148646.peg.1870
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148646.peg.1046
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148646.peg.1972
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148646.peg.68
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148646.peg.657
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148646.peg.91
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148646.peg.538
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148646.peg.1096
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148646.peg.146
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148646.peg.1709
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.148646.peg.1581
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.148646.peg.1860
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.148646.peg.1859
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148646.peg.1582
Rubrerythrin	Rubrerythrin	fig|6666666.148646.peg.1182
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.148646.peg.791
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.148646.peg.1535
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.148646.peg.1127
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.148646.peg.395
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.148646.peg.1722
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148646.peg.1269
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148646.peg.1451
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.148646.peg.1318
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148646.peg.463
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148646.peg.464
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.135
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.272
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.1741
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.135
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.272
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148646.peg.1741
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148646.peg.1075
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.148646.peg.781
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148646.peg.1436
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148646.peg.1436
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148646.peg.1667
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148646.peg.1668
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148646.peg.1820
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.148646.peg.132
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148646.peg.1206
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.148646.peg.124
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.148646.peg.747
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.148646.peg.408
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.148646.peg.983
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148646.peg.1725
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148646.peg.874
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148646.peg.904
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148646.peg.1048
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.148646.peg.766
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.148646.peg.1362
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.148646.peg.1808
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.148646.peg.1808
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.148646.peg.1415
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148646.peg.1416
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148646.peg.1417
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148646.peg.1119
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.148646.peg.861
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148646.peg.1627
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148646.peg.1416
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148646.peg.1417
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148646.peg.874
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148646.peg.118
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148646.peg.5
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148646.peg.4
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148646.peg.5
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148646.peg.4
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.148646.peg.1614
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.148646.peg.1614
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148646.peg.1233
Thiamin_biosynthesis	Hydroxymethylpyrimidine ABC transporter, transmembrane component	fig|6666666.148646.peg.635
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.148646.peg.1578
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.148646.peg.954
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.148646.peg.429
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.148646.peg.955
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.148646.peg.1577
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148646.peg.956
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148646.peg.858
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148646.peg.1579
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148646.peg.70
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.148646.peg.957
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiH	fig|6666666.148646.peg.958
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.148646.peg.52
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.148646.peg.53
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.148646.peg.1025
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.148646.peg.193
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148646.peg.1006
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148646.peg.739
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.148646.peg.693
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148646.peg.694
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148646.peg.794
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148646.peg.769
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.148646.peg.1066
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148646.peg.535
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148646.peg.381
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.148646.peg.883
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.148646.peg.65
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.66
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1062
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148646.peg.1103
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148646.peg.64
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148646.peg.1100
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.148646.peg.266
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148646.peg.481
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148646.peg.615
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148646.peg.616
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148646.peg.890
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148646.peg.1731
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148646.peg.1754
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148646.peg.1943
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148646.peg.987
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.148646.peg.1846
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.148646.peg.1545
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.148646.peg.1902
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.148646.peg.986
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.148646.peg.1124
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.148646.peg.1249
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148646.peg.749
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.148646.peg.716
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.148646.peg.1614
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.148646.peg.33
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148646.peg.771
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.148646.peg.1614
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.148646.peg.33
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.148646.peg.542
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148646.peg.771
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.148646.peg.1859
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.148646.peg.1848
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148646.peg.898
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.148646.peg.23
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.148646.peg.1591
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.148646.peg.985
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.148646.peg.210
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.148646.peg.1347
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148646.peg.1592
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.148646.peg.1515
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.148646.peg.367
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.148646.peg.1172
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148646.peg.183
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148646.peg.1206
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148646.peg.1216
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.148646.peg.1581
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.148646.peg.408
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148646.peg.103
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.148646.peg.1235
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148646.peg.1793
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148646.peg.2
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148646.peg.1548
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148646.peg.1715
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148646.peg.1958
Type_VI_secretion_systems	ClpB protein	fig|6666666.148646.peg.724
Type_VI_secretion_systems	ClpB protein	fig|6666666.148646.peg.1565
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148646.peg.704
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148646.peg.811
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148646.peg.648
USS-DB-7	ClpB protein	fig|6666666.148646.peg.724
USS-DB-7	ClpB protein	fig|6666666.148646.peg.1565
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.148646.peg.1069
Universal_GTPases	GTP-binding protein EngA	fig|6666666.148646.peg.922
Universal_GTPases	GTP-binding protein EngB	fig|6666666.148646.peg.1886
Universal_GTPases	GTP-binding protein Era	fig|6666666.148646.peg.923
Universal_GTPases	GTP-binding protein HflX	fig|6666666.148646.peg.1452
Universal_GTPases	GTP-binding protein Obg	fig|6666666.148646.peg.1107
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.148646.peg.49
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148646.peg.1835
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.148646.peg.1580
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148646.peg.75
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148646.peg.719
Universal_GTPases	Translation elongation factor G	fig|6666666.148646.peg.1614
Universal_GTPases	Translation elongation factor LepA	fig|6666666.148646.peg.542
Universal_GTPases	Translation elongation factor Tu	fig|6666666.148646.peg.1848
Universal_GTPases	Translation initiation factor 2	fig|6666666.148646.peg.985
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148646.peg.1689
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148646.peg.1267
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.148646.peg.1407
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148646.peg.11
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.148646.peg.1339
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.148646.peg.1803
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.148646.peg.1804
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.148646.peg.1802
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.148646.peg.1805
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.148646.peg.1801
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.148646.peg.1806
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.148646.peg.1807
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148646.peg.692
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148646.peg.453
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148646.peg.688
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.148646.peg.917
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148646.peg.918
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.148646.peg.1101
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.148646.peg.1178
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148646.peg.1096
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148646.peg.1001
YjeE	NAD(P)HX dehydratase	fig|6666666.148646.peg.1510
YjeE	NAD(P)HX epimerase	fig|6666666.148646.peg.1510
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148646.peg.1096
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148646.peg.27
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.148646.peg.757
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.148646.peg.758
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.148646.peg.761
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148646.peg.756
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148646.peg.1973
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148646.peg.759
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.148646.peg.757
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.148646.peg.758
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148646.peg.756
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148646.peg.760
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148646.peg.1670
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148646.peg.327
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148646.peg.326
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148646.peg.325
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148646.peg.324
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148646.peg.1271
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148646.peg.1967
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148646.peg.1835
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148646.peg.1659
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148646.peg.692
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148646.peg.366
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148646.peg.1828
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148646.peg.1950
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.148646.peg.1024
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148646.peg.962
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148646.peg.1202
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148646.peg.1202
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.148646.peg.282
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148646.peg.1728
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.148646.peg.41
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.643
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148646.peg.777
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148646.peg.739
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.148646.peg.25
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148646.peg.1574
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148646.peg.1953
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148646.peg.1019
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148646.peg.1242
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148646.peg.744
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148646.peg.1321
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148646.peg.1321
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148646.peg.1969
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148646.peg.21
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.148646.peg.21
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.424
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148646.peg.1023
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148646.peg.133
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148646.peg.1306
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148646.peg.227
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148646.peg.545
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.148646.peg.1028
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.148646.peg.726
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.148646.peg.73
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148646.peg.1464
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.148646.peg.1629
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148646.peg.330
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148646.peg.902
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.148646.peg.1572
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.148646.peg.1438
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.148646.peg.1113
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.148646.peg.644
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.148646.peg.1203
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.148646.peg.1252
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.148646.peg.1536
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.148646.peg.139
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.148646.peg.1315
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148646.peg.1920
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.148646.peg.211
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.148646.peg.1686
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.148646.peg.1031
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.148646.peg.737
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148646.peg.1271
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148646.peg.1967
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148646.peg.1728
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.148646.peg.1540
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.148646.peg.157
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148646.peg.59
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148646.peg.1835
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148646.peg.982
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.148646.peg.983
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.148646.peg.981
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148646.peg.1688
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.148646.peg.1145
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148646.peg.265
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148646.peg.264
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148646.peg.880
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148646.peg.1308
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148646.peg.1269
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148646.peg.1451
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148646.peg.146
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148646.peg.1317
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148646.peg.1961
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.148646.peg.1719
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148646.peg.122
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148646.peg.1898
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148646.peg.1949
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148646.peg.879
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148646.peg.1659
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148646.peg.159
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148646.peg.406
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148646.peg.227
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148646.peg.1964
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148646.peg.1117
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148646.peg.1176
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.148646.peg.1963
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148646.peg.122
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148646.peg.1898
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148646.peg.1949
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148646.peg.879
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148646.peg.159
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148646.peg.227
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148646.peg.1964
tRNAs	tRNA-Ala-GGC	fig|6666666.148646.rna.1
tRNAs	tRNA-Arg-ACG	fig|6666666.148646.rna.16
tRNAs	tRNA-Arg-ACG	fig|6666666.148646.rna.17
tRNAs	tRNA-Arg-CCG	fig|6666666.148646.rna.51
tRNAs	tRNA-Cys-GCA	fig|6666666.148646.rna.30
tRNAs	tRNA-Gly-CCC	fig|6666666.148646.rna.29
tRNAs	tRNA-Gly-GCC	fig|6666666.148646.rna.4
tRNAs	tRNA-Gly-GCC	fig|6666666.148646.rna.12
tRNAs	tRNA-Leu-CAA	fig|6666666.148646.rna.46
tRNAs	tRNA-Leu-CAG	fig|6666666.148646.rna.5
tRNAs	tRNA-Leu-GAG	fig|6666666.148646.rna.6
tRNAs	tRNA-Phe-GAA	fig|6666666.148646.rna.31
tRNAs	tRNA-Pro-CGG	fig|6666666.148646.rna.23
tRNAs	tRNA-Pro-GGG	fig|6666666.148646.rna.14
tRNAs	tRNA-Ser-GGA	fig|6666666.148646.rna.28
tRNAs	tRNA-Trp-CCA	fig|6666666.148646.rna.48
