16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148650.peg.884
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.148650.peg.885
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148650.peg.692
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.148650.peg.886
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.148650.peg.1266
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148650.peg.1100
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148650.peg.269
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148650.peg.135
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148650.peg.197
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148650.peg.1514
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148650.peg.1768
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148650.peg.1772
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148650.peg.235
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148650.peg.688
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148650.peg.1526
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148650.peg.901
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148650.peg.1130
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148650.peg.855
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148650.peg.410
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.859
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.944
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.964
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.1267
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.1406
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.1473
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.1525
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.1841
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148650.peg.2051
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148650.peg.1569
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148650.peg.187
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.148650.peg.1031
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148650.peg.536
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148650.peg.868
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148650.peg.265
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148650.peg.266
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148650.peg.265
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148650.peg.279
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148650.peg.270
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148650.peg.269
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148650.peg.267
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148650.peg.382
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148650.peg.268
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148650.peg.383
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148650.peg.322
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.684
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.1719
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148650.peg.322
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.148650.peg.794
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.148650.peg.795
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.148650.peg.796
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.148650.peg.797
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.148650.peg.798
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.148650.peg.791
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.148650.peg.792
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.148650.peg.247
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148650.peg.765
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148650.peg.228
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148650.peg.1394
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.148650.peg.1710
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148650.peg.1095
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148650.peg.896
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148650.peg.1661
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148650.peg.269
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.390
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.1339
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148650.peg.390
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148650.peg.1339
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.390
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.1339
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148650.peg.733
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148650.peg.733
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148650.peg.524
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148650.peg.733
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148650.peg.984
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148650.peg.523
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148650.peg.982
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.148650.peg.26
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148650.peg.1451
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148650.peg.1450
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148650.peg.323
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148650.peg.1258
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.148650.peg.876
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148650.peg.1287
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148650.peg.884
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.148650.peg.1121
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.148650.peg.885
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.148650.peg.877
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.148650.peg.880
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.148650.peg.1975
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148650.peg.875
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.148650.peg.1290
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.148650.peg.1919
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148650.peg.522
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148650.peg.845
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.148650.peg.2060
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.148650.peg.689
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.148650.peg.690
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.148650.peg.691
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.148650.peg.1433
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.148650.peg.609
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148650.peg.531
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.148650.peg.886
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148650.peg.1258
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.148650.peg.876
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148650.peg.884
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.148650.peg.1121
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.148650.peg.885
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.148650.peg.877
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.148650.peg.880
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148650.peg.875
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148650.peg.522
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148650.peg.521
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.148650.peg.689
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.148650.peg.690
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.148650.peg.691
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.148650.peg.693
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.148650.peg.1433
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.148650.peg.609
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.148650.peg.522
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.148650.peg.521
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.148650.peg.1121
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148650.peg.156
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148650.peg.128
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148650.peg.375
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.148650.peg.114
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148650.peg.384
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148650.peg.1553
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.148650.peg.1140
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148650.peg.692
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.148650.peg.689
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.148650.peg.690
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.148650.peg.691
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.148650.peg.693
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.148650.peg.1433
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.148650.peg.609
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.148650.peg.800
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.148650.peg.800
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148650.peg.250
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148650.peg.531
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148650.peg.236
Beta-lactamase	Beta-lactamase (EC 3.5.2.6)	fig|6666666.148650.peg.2092
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148650.peg.1255
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148650.peg.641
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148650.peg.1241
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148650.peg.1271
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148650.peg.2081
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148650.peg.977
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.148650.peg.976
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.148650.peg.1370
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.148650.peg.1369
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.148650.peg.288
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.148650.peg.313
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148650.peg.810
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148650.peg.1008
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148650.peg.945
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148650.peg.1615
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148650.peg.641
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148650.peg.1241
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148650.peg.977
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.148650.peg.976
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.148650.peg.1370
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.148650.peg.1369
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.148650.peg.288
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.148650.peg.313
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148650.peg.538
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148650.peg.1008
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148650.peg.641
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148650.peg.1241
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148650.peg.1271
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148650.peg.2081
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148650.peg.977
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.148650.peg.976
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.148650.peg.1370
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.148650.peg.1369
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.148650.peg.288
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.148650.peg.313
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148650.peg.810
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148650.peg.538
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148650.peg.1008
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148650.peg.945
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148650.peg.1615
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148650.peg.252
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.148650.peg.176
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.148650.peg.68
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148650.peg.1972
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.148650.peg.395
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.148650.peg.1757
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.148650.peg.1758
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148650.peg.1712
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148650.peg.607
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148650.peg.1125
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148650.peg.402
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148650.peg.1126
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148650.peg.984
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148650.peg.47
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148650.peg.730
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.148650.peg.673
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.148650.peg.1530
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.148650.peg.1530
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148650.peg.618
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148650.peg.1971
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148650.peg.1278
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.148650.peg.1031
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148650.peg.536
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148650.peg.504
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148650.peg.1632
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.148650.peg.1633
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.148650.peg.1634
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148650.peg.550
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148650.peg.1843
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.148650.peg.1844
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.148650.peg.1845
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148650.peg.820
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.148650.peg.264
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.148650.peg.1205
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148650.peg.1558
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148650.peg.1632
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148650.peg.1810
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148650.peg.1632
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148650.peg.1810
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.148650.peg.2061
CBSS-296591.1.peg.2330	NAD-dependent epimerase/dehydratase family protein	fig|6666666.148650.peg.1594
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148650.peg.1789
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148650.peg.1953
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148650.peg.2013
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.148650.peg.1817
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.148650.peg.1818
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148650.peg.10
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.148650.peg.599
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148650.peg.905
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148650.peg.1574
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148650.peg.480
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.148650.peg.1286
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148650.peg.322
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148650.peg.322
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.148650.peg.1091
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148650.peg.336
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.148650.peg.335
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148650.peg.1292
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.148650.peg.1806
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148650.peg.1759
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148650.peg.519
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148650.peg.1809
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148650.peg.607
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.152
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.345
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.932
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1170
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1216
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1251
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1654
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.911
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.1398
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148650.peg.845
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.148650.peg.1738
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.148650.peg.690
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.148650.peg.691
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.148650.peg.1433
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148650.peg.20
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148650.peg.807
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148650.peg.736
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.148650.peg.842
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148650.peg.674
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148650.peg.228
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.148650.peg.2018
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.923
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.1895
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.148650.peg.802
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148650.peg.338
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.148650.peg.2046
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148650.peg.1726
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148650.peg.601
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148650.peg.884
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148650.peg.692
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148650.peg.565
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.148650.peg.957
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.148650.peg.1806
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148650.peg.228
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148650.peg.1547
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148650.peg.1954
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148650.peg.896
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148650.peg.1661
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148650.peg.1319
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148650.peg.128
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148650.peg.501
CRISPRs	CRISPR-associated RecB family exonuclease Cas4a	fig|6666666.148650.peg.1328
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.148650.peg.1325
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148650.peg.1329
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148650.peg.1330
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.148650.peg.358
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148650.peg.359
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148650.peg.401
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148650.peg.232
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148650.peg.2042
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148650.peg.1073
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148650.peg.225
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148650.peg.804
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.148650.peg.226
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148650.peg.1144
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.391
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.414
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.1295
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148650.peg.47
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148650.peg.730
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.148650.peg.1923
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148650.peg.167
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148650.peg.1623
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.148650.peg.1881
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.148650.peg.766
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.148650.peg.767
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148650.peg.1951
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.148650.peg.1368
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.390
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.1339
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.390
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.1339
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.148650.peg.104
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148650.peg.522
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148650.peg.521
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148650.peg.2027
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148650.peg.1253
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148650.peg.1101
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.148650.peg.1840
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148650.peg.1672
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.148650.peg.359
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.148650.peg.1432
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.148650.peg.1051
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148650.peg.1050
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148650.peg.1640
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148650.peg.1333
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148650.peg.1258
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148650.peg.1287
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148650.peg.397
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148650.peg.546
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148650.peg.545
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.148650.peg.50
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.148650.peg.635
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148650.peg.1002
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148650.peg.900
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148650.peg.198
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148650.peg.769
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148650.peg.749
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148650.peg.1252
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148650.peg.1491
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148650.peg.748
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148650.peg.1175
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.148650.peg.1091
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148650.peg.127
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148650.peg.492
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148650.peg.127
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148650.peg.1648
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148650.peg.1476
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148650.peg.1932
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148650.peg.1112
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148650.peg.1479
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148650.peg.711
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148650.peg.1478
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148650.peg.668
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148650.peg.707
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148650.peg.711
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148650.peg.712
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148650.peg.712
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148650.peg.707
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148650.peg.1934
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148650.peg.1936
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148650.peg.95
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148650.peg.1933
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148650.peg.1477
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148650.peg.1445
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148650.peg.373
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148650.peg.1023
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.148650.peg.967
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148650.peg.373
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148650.peg.1023
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148650.peg.20
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148650.peg.372
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148650.peg.1868
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.148650.peg.125
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148650.peg.907
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148650.peg.237
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.148650.peg.671
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148650.peg.666
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148650.peg.1891
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148650.peg.1810
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.148650.peg.1103
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.148650.peg.1103
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148650.peg.907
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148650.peg.237
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.148650.peg.1435
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148650.peg.666
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148650.peg.1891
Coenzyme_B12_biosynthesis	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	fig|6666666.148650.peg.1421
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148650.peg.1476
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148650.peg.1932
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148650.peg.1112
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148650.peg.1479
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148650.peg.711
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148650.peg.1478
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148650.peg.668
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148650.peg.707
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148650.peg.711
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148650.peg.712
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148650.peg.712
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.148650.peg.708
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.148650.peg.708
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148650.peg.707
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148650.peg.1934
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148650.peg.1936
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148650.peg.95
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148650.peg.1933
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148650.peg.1477
Coenzyme_B12_biosynthesis	Predicted cobalt transporter in Bacteroides_Porphyromonas	fig|6666666.148650.peg.18
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148650.peg.1445
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.148650.peg.1447
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148650.peg.1423
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148650.peg.1448
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148650.peg.1508
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.148650.peg.1663
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148650.peg.1560
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.148650.peg.1176
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.148650.peg.1605
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.148650.peg.432
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148650.peg.492
Conjugative_transposon,_Bacteroidales	Conjugative transposon primase TraP	fig|6666666.148650.peg.345
Conjugative_transposon,_Bacteroidales	Conjugative transposon primase TraP	fig|6666666.148650.peg.1654
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148650.peg.27
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148650.peg.306
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148650.peg.465
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148650.peg.1237
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148650.peg.464
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148650.peg.1234
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148650.peg.1235
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148650.peg.2084
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraC	fig|6666666.148650.peg.308
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.148650.peg.305
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.148650.peg.1238
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148650.peg.304
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148650.peg.462
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148650.peg.303
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148650.peg.461
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148650.peg.460
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148650.peg.1921
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148650.peg.2022
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148650.peg.459
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148650.peg.1920
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148650.peg.2021
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148650.peg.196
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148650.peg.341
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148650.peg.458
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148650.peg.457
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraL	fig|6666666.148650.peg.342
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148650.peg.325
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148650.peg.343
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148650.peg.354
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148650.peg.455
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148650.peg.454
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148650.peg.75
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148650.peg.344
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148650.peg.453
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148650.peg.1653
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148650.peg.151
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148650.peg.346
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148650.peg.452
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148650.peg.1655
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148650.peg.296
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148650.peg.468
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148650.peg.295
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148650.peg.469
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148650.peg.45
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148650.peg.297
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148650.peg.467
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148650.peg.2087
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148650.peg.156
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148650.peg.629
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.148650.peg.987
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148650.peg.1319
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148650.peg.128
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148650.peg.1393
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148650.peg.138
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148650.peg.804
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.148650.peg.114
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148650.peg.384
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148650.peg.1553
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148650.peg.41
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.148650.peg.633
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148650.peg.1126
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148650.peg.1126
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.148650.peg.174
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.148650.peg.1924
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.923
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.1895
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.148650.peg.1872
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148650.peg.1095
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148650.peg.1095
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148650.peg.225
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.148650.peg.842
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.148650.peg.1912
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.148650.peg.633
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148650.peg.1013
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.148650.peg.302
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148650.peg.2027
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148650.peg.1253
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.148650.peg.12
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148650.peg.474
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148650.peg.1498
DNA_processing_cluster	Recombination protein RecR	fig|6666666.148650.peg.844
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.148650.peg.738
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.148650.peg.121
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.148650.peg.1820
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.148650.peg.1334
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148650.peg.1712
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.148650.peg.1535
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.148650.peg.1356
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.148650.peg.1140
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.148650.peg.1105
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.148650.peg.920
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148650.peg.1065
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148650.peg.1978
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148650.peg.164
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148650.peg.674
DNA_repair,_bacterial	RecA protein	fig|6666666.148650.peg.1667
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.148650.peg.922
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.148650.peg.1850
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.148650.peg.1543
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.148650.peg.273
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.148650.peg.1824
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148650.peg.1635
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148650.peg.1636
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.148650.peg.1854
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.148650.peg.947
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.148650.peg.1840
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.148650.peg.1349
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.148650.peg.1667
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.148650.peg.844
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.148650.peg.922
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148650.peg.1013
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148650.peg.736
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.148650.peg.1543
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.148650.peg.1554
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.148650.peg.1667
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.148650.peg.537
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148650.peg.1393
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.148650.peg.104
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148650.peg.2027
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148650.peg.1253
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148650.peg.1101
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.148650.peg.1840
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148650.peg.545
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.148650.peg.1839
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.148650.peg.502
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.148650.peg.846
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148650.peg.629
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148650.peg.474
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148650.peg.1498
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148650.peg.2027
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148650.peg.1253
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148650.peg.1373
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148650.peg.1809
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148650.peg.1060
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.148650.peg.360
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.148650.peg.688
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.148650.peg.1729
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.148650.peg.600
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.148650.peg.494
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148650.peg.688
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.148650.peg.1032
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.148650.peg.204
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.148650.peg.204
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148650.peg.1526
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148650.peg.868
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.148650.peg.1799
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.148650.peg.1800
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148650.peg.362
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148650.peg.361
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.148650.peg.173
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148650.peg.281
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148650.peg.989
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.148650.peg.280
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.148650.peg.1739
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148650.peg.1030
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.148650.peg.1063
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148650.peg.1381
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.148650.peg.1337
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.684
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.1719
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.148650.peg.1052
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.148650.peg.1355
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148650.peg.982
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148650.peg.369
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148650.peg.517
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148650.peg.140
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.148650.peg.22
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148650.peg.515
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148650.peg.1853
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.148650.peg.941
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148650.peg.1565
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148650.peg.2042
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148650.peg.1073
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148650.peg.510
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.148650.peg.264
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.262
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.263
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148650.peg.1168
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148650.peg.74
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148650.peg.1383
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148650.peg.2091
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148650.peg.1028
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148650.peg.820
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.148650.peg.1528
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.148650.peg.2059
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.148650.peg.1527
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.148650.peg.1261
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.148650.peg.15
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.148650.peg.518
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148650.peg.264
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.262
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.263
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.148650.peg.264
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.148650.peg.713
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.262
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.263
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.148650.peg.239
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.911
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.1398
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.148650.peg.239
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148650.peg.884
Flavodoxin	Flavodoxin	fig|6666666.148650.peg.1057
Flavodoxin	Flavodoxin 1	fig|6666666.148650.peg.1096
Flavodoxin	Flavodoxin 2	fig|6666666.148650.peg.934
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.148650.peg.934
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148650.peg.1662
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148650.peg.1970
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148650.peg.1100
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148650.peg.749
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148650.peg.135
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.148650.peg.651
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148650.peg.966
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148650.peg.801
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.148650.peg.651
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148650.peg.1142
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148650.peg.1252
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148650.peg.1491
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148650.peg.748
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148650.peg.134
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148650.peg.1662
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148650.peg.1970
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148650.peg.237
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148650.peg.1287
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148650.peg.966
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148650.peg.801
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148650.peg.1142
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148650.peg.397
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148650.peg.666
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148650.peg.1002
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1041
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1042
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.148650.peg.1353
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148650.peg.908
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148650.peg.908
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1041
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1042
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148650.peg.153
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148650.peg.1440
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.148650.peg.1794
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.148650.peg.82
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148650.peg.826
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148650.peg.1508
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.148650.peg.1568
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148650.peg.1480
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148650.peg.988
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.148650.peg.2039
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148650.peg.826
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148650.peg.1387
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.148650.peg.1639
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148650.peg.1095
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148650.peg.1308
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148650.peg.669
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148650.peg.825
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148650.peg.663
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148650.peg.901
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148650.peg.669
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148650.peg.1954
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148650.peg.775
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148650.peg.1095
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.148650.peg.599
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148650.peg.1638
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148650.peg.1039
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148650.peg.1039
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148650.peg.776
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.340
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.1430
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.1941
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148650.peg.901
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148650.peg.1759
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148650.peg.1954
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148650.peg.197
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.148650.peg.599
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148650.peg.1638
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148650.peg.905
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148650.peg.1574
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148650.peg.1627
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148650.peg.1913
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148650.peg.376
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148650.peg.1474
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.148650.peg.1077
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148650.peg.1308
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.148650.peg.941
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148650.peg.401
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148650.peg.232
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148650.peg.1565
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148650.peg.1722
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148650.peg.2042
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148650.peg.1073
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148650.peg.510
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.148650.peg.543
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148650.peg.754
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148650.peg.1144
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.148650.peg.941
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148650.peg.1722
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148650.peg.1073
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148650.peg.510
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148650.peg.754
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148650.peg.1144
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.148650.peg.1349
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.148650.peg.2060
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148650.peg.1313
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.923
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.1895
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148650.peg.338
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148650.peg.1600
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.148650.peg.637
GroEL_GroES	Chaperone protein DnaK	fig|6666666.148650.peg.590
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.148650.peg.329
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.148650.peg.328
GroEL_GroES	Heat shock protein GrpE	fig|6666666.148650.peg.636
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.148650.peg.637
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.148650.peg.590
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.148650.peg.636
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148650.peg.664
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148650.peg.812
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148650.peg.1648
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148650.peg.412
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148650.peg.545
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.148650.peg.817
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.148650.peg.1266
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148650.peg.111
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.148650.peg.1280
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148650.peg.268
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148650.peg.383
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.391
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.414
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.1295
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.148650.peg.507
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148650.peg.1947
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148650.peg.664
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.148650.peg.1651
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.391
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.414
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.1295
Hfl_operon	GTP-binding protein HflX	fig|6666666.148650.peg.423
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148650.peg.422
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148650.peg.1772
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.148650.peg.1767
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.148650.peg.1771
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.148650.peg.36
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.148650.peg.1268
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148650.peg.1315
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148650.peg.602
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148650.peg.812
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.148650.peg.113
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.148650.peg.114
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148650.peg.1451
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148650.peg.1450
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.148650.peg.904
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148650.peg.629
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
Inteins	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148650.peg.1066
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148650.peg.848
Inteins	Translation initiation factor 2	fig|6666666.148650.peg.68
Inteins	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148650.peg.1617
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148650.peg.228
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148650.peg.1394
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.148650.peg.768
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148650.peg.71
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.148650.peg.70
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.148650.peg.72
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.148650.peg.638
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.148650.peg.1650
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.148650.peg.1752
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148650.peg.265
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148650.peg.765
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148650.peg.269
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.390
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.1339
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148650.peg.1726
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148650.peg.115
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148650.peg.601
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148650.peg.79
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148650.peg.1977
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148650.peg.187
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148650.peg.1159
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148650.peg.390
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148650.peg.1339
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148650.peg.565
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.390
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.1339
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.390
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.1339
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148650.peg.390
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148650.peg.1339
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.390
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.1339
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148650.peg.1339
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148650.peg.565
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148650.peg.1569
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.148650.peg.1434
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148650.peg.1948
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.148650.peg.933
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148650.peg.1027
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.148650.peg.1044
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.148650.peg.110
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148650.peg.1316
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.148650.peg.419
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148650.peg.167
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148650.peg.1623
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.148650.peg.409
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148650.peg.639
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148650.peg.1029
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.148650.peg.1725
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.148650.peg.2035
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.148650.peg.421
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148650.peg.1944
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148650.peg.607
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148650.peg.1125
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148650.peg.1948
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.148650.peg.1833
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.148650.peg.1831
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148650.peg.1832
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148650.peg.1834
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.148650.peg.1829
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.148650.peg.1830
Lactate_utilization	L-lactate permease	fig|6666666.148650.peg.840
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.148650.peg.1943
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148650.peg.1944
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.148650.peg.1945
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148650.peg.1789
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148650.peg.1116
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1041
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1042
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148650.peg.153
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148650.peg.1440
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.148650.peg.1117
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148650.peg.1789
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148650.peg.153
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148650.peg.1440
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148650.peg.501
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148650.peg.765
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148650.peg.765
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148650.peg.197
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148650.peg.1617
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.148650.peg.1283
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148650.peg.1171
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.148650.peg.1283
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148650.peg.1171
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148650.peg.174
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148650.peg.807
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.148650.peg.200
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.148650.peg.1089
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.148650.peg.175
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148650.peg.1028
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148650.peg.1027
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148650.peg.1316
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148650.peg.567
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148650.peg.568
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148650.peg.216
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148650.peg.566
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148650.peg.639
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148650.peg.1029
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.148650.peg.921
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.148650.peg.921
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148650.peg.103
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148650.peg.1343
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148650.peg.1007
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148650.peg.888
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.148650.peg.1291
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148650.peg.1292
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148650.peg.201
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148650.peg.103
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148650.peg.1343
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148650.peg.1007
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148650.peg.888
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.148650.peg.1291
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148650.peg.1292
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148650.peg.201
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148650.peg.272
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148650.peg.271
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148650.peg.275
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.148650.peg.276
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.148650.peg.278
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148650.peg.266
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148650.peg.265
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.148650.peg.277
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148650.peg.279
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148650.peg.270
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148650.peg.269
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148650.peg.267
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148650.peg.382
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148650.peg.268
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148650.peg.383
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148650.peg.272
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148650.peg.271
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148650.peg.275
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148650.peg.362
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148650.peg.361
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.152
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.345
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.932
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1170
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1216
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1251
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148650.peg.1654
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.911
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.1398
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.148650.peg.1825
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.148650.peg.874
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148650.peg.1553
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.923
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.1895
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.148650.peg.1923
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.148650.peg.514
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148650.peg.376
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148650.peg.1116
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148650.peg.154
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148650.peg.1079
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148650.peg.1474
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148650.peg.1309
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148650.peg.63
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148650.peg.64
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148650.peg.159
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148650.peg.619
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.148650.peg.1536
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.148650.peg.117
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.148650.peg.655
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.148650.peg.250
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1041
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148650.peg.1042
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148650.peg.493
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148650.peg.1547
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148650.peg.883
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148650.peg.238
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148650.peg.247
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148650.peg.59
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148650.peg.322
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148650.peg.4
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148650.peg.323
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.148650.peg.1785
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148650.peg.1269
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148650.peg.1270
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148650.peg.322
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148650.peg.4
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148650.peg.323
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148650.peg.322
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148650.peg.1387
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148650.peg.530
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148650.peg.758
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148650.peg.111
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.148650.peg.1865
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148650.peg.99
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148650.peg.1275
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.148650.peg.234
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148650.peg.1547
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148650.peg.519
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148650.peg.728
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148650.peg.1835
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148650.peg.1836
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.148650.peg.951
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.148650.peg.952
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.148650.peg.953
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.148650.peg.1989
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.148650.peg.1990
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.148650.peg.1991
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.148650.peg.1828
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148650.peg.788
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148650.peg.789
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148650.peg.790
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148650.peg.900
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148650.peg.1789
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148650.peg.1554
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148650.peg.1554
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.148650.peg.363
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148650.peg.788
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.148650.peg.418
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.148650.peg.363
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148650.peg.1455
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148650.peg.1016
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.148650.peg.1017
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148650.peg.789
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148650.peg.790
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.148650.peg.1751
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.148650.peg.1746
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.148650.peg.1747
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.148650.peg.1748
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.148650.peg.1750
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.148650.peg.1749
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.148650.peg.1297
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.148650.peg.1298
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.148650.peg.1299
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.148650.peg.1300
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.148650.peg.1301
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.148650.peg.1302
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.148650.peg.1136
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.148650.peg.1133
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148650.peg.1132
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148650.peg.1137
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148650.peg.1137
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.148650.peg.40
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148650.peg.1455
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.148650.peg.938
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148650.peg.937
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148650.peg.1966
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.148650.peg.723
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.148650.peg.1139
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148650.peg.1726
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148650.peg.115
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148650.peg.601
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148650.peg.79
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148650.peg.1977
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148650.peg.187
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148650.peg.1159
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.148650.peg.1254
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148650.peg.602
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148650.peg.66
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.148650.peg.176
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.148650.peg.67
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.148650.peg.68
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148650.peg.1100
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148650.peg.1514
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148650.peg.1768
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.148650.peg.235
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148650.peg.235
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.148650.peg.1537
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.148650.peg.921
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.148650.peg.1537
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148650.peg.1966
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.148650.peg.1537
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.148650.peg.83
Oxidative_stress	Rubrerythrin	fig|6666666.148650.peg.569
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148650.peg.785
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148650.peg.786
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148650.peg.1838
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148650.peg.225
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148650.peg.868
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148650.peg.804
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.148650.peg.1353
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.148650.peg.226
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148650.peg.969
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148650.peg.969
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148650.peg.884
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148650.peg.1404
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148650.peg.1547
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148650.peg.1480
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148650.peg.402
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148650.peg.692
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.148650.peg.882
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.148650.peg.693
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148650.peg.1172
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148650.peg.1724
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148650.peg.879
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148650.peg.878
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148650.peg.881
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148650.peg.883
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148650.peg.238
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148650.peg.247
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148650.peg.1404
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148650.peg.878
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148650.peg.881
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148650.peg.883
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148650.peg.238
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148650.peg.247
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.148650.peg.1487
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148650.peg.1484
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148650.peg.1486
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148650.peg.431
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148650.peg.1853
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.148650.peg.910
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148650.peg.567
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148650.peg.568
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148650.peg.1853
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148650.peg.1255
Persister_Cells	Cell division inhibitor	fig|6666666.148650.peg.957
Persister_Cells	HipA protein	fig|6666666.148650.peg.1692
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.148650.peg.1663
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148650.peg.333
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148650.peg.1660
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.148650.peg.1596
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148650.peg.1567
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148650.peg.1503
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148650.peg.1504
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148650.peg.422
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.148650.peg.1512
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.148650.peg.1587
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148650.peg.1112
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148650.peg.1479
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148650.peg.510
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148650.peg.1954
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148650.peg.197
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148650.peg.1095
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.148650.peg.599
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148650.peg.1638
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148650.peg.1308
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148650.peg.901
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148650.peg.522
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148650.peg.521
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148650.peg.1480
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148650.peg.375
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148650.peg.28
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148650.peg.322
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148650.peg.524
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.148650.peg.532
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148650.peg.523
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148650.peg.265
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148650.peg.266
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148650.peg.265
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148650.peg.279
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148650.peg.279
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148650.peg.270
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148650.peg.1567
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148650.peg.422
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.390
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148650.peg.1339
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.390
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148650.peg.1339
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148650.peg.1339
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148650.peg.565
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148650.peg.1484
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148650.peg.1486
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148650.peg.431
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.148650.peg.1506
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148650.peg.113
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148650.peg.113
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148650.peg.992
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148650.peg.114
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148650.peg.114
Potassium_homeostasis	cAMP-dependent Kef-type K+ transport system	fig|6666666.148650.peg.815
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.148650.peg.1616
Programmed_frameshift	programmed frameshift-containing	fig|6666666.148650.peg.1616
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148650.peg.984
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.262
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.263
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148650.peg.1132
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148650.peg.1137
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.148650.peg.1131
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.148650.peg.1984
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148650.peg.1966
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.148650.peg.637
Protein_chaperones	Chaperone protein DnaK	fig|6666666.148650.peg.590
Protein_chaperones	Chaperone protein HtpG	fig|6666666.148650.peg.898
Protein_chaperones	ClpB protein	fig|6666666.148650.peg.143
Protein_chaperones	ClpB protein	fig|6666666.148650.peg.1056
Protein_chaperones	Heat shock protein GrpE	fig|6666666.148650.peg.636
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148650.peg.1125
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148650.peg.814
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148650.peg.1918
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148650.peg.622
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148650.peg.1917
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148650.peg.97
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.148650.peg.1855
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148650.peg.1856
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.148650.peg.1147
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148650.peg.143
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148650.peg.1056
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.148650.peg.1356
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148650.peg.1339
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.148650.peg.975
Purine_Utilization	Xanthine permease	fig|6666666.148650.peg.2066
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.148650.peg.188
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148650.peg.550
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148650.peg.1843
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148650.peg.550
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.148650.peg.597
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.148650.peg.396
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148650.peg.1060
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.148650.peg.652
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148650.peg.908
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148650.peg.908
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148650.peg.336
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148650.peg.397
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148650.peg.326
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.148650.peg.506
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148650.peg.422
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.684
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.1719
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148650.peg.2065
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148650.peg.1344
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148650.peg.1065
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148650.peg.1978
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148650.peg.908
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148650.peg.908
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148650.peg.326
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148650.peg.969
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148650.peg.115
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148650.peg.140
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148650.peg.775
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.148650.peg.834
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148650.peg.2042
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148650.peg.776
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.148650.peg.61
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.148650.peg.417
Pyrimidine_utilization	Uracil permease	fig|6666666.148650.peg.1063
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148650.peg.1269
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148650.peg.1270
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.148650.peg.247
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148650.peg.765
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148650.peg.1039
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148650.peg.1039
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.148650.peg.222
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148650.peg.1137
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.148650.peg.1072
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148650.peg.754
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148650.peg.264
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.148650.peg.1507
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148650.peg.101
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.262
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.263
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.148650.peg.660
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148650.peg.1142
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148650.peg.829
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148650.peg.1896
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.148650.peg.1642
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148650.peg.719
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148650.peg.720
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148650.peg.618
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148650.peg.1971
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148650.peg.1278
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148650.peg.1560
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148650.peg.1632
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.148650.peg.1106
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148650.peg.970
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.148650.peg.1806
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148650.peg.138
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148650.peg.1648
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148650.peg.515
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148650.peg.1640
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148650.peg.991
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.148650.peg.240
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148650.peg.610
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148650.peg.1388
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.148650.peg.919
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148650.peg.522
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148650.peg.521
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148650.peg.1672
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148650.peg.1640
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148650.peg.1333
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148650.peg.1672
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148650.peg.359
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.148650.peg.1432
RNA_modification_cluster	Protein YidD	fig|6666666.148650.peg.1051
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148650.peg.1050
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.148650.peg.2019
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148650.peg.1835
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148650.peg.1836
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.148650.peg.1551
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148650.peg.845
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148650.peg.252
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.148650.peg.1529
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148650.peg.1059
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148650.peg.1256
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148650.peg.1403
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148650.peg.821
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148650.peg.628
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148650.peg.1972
RecA_and_RecX	RecA protein	fig|6666666.148650.peg.1667
RecA_and_RecX	Regulatory protein RecX	fig|6666666.148650.peg.537
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148650.peg.369
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148650.peg.517
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148650.peg.728
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148650.peg.2042
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148650.peg.101
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148650.peg.1455
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148650.peg.1016
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.148650.peg.364
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148650.peg.2027
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148650.peg.1253
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148650.peg.1373
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148650.peg.1809
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148650.peg.554
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148650.peg.555
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148650.peg.1688
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148650.peg.1690
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148650.peg.1684
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148650.peg.1686
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148650.peg.1950
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.148650.peg.141
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148650.peg.1789
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148650.peg.1618
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148650.peg.1951
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148650.peg.1952
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148650.peg.1953
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148650.peg.917
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148650.peg.535
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148650.peg.1982
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148650.peg.535
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148650.peg.606
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148650.peg.917
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148650.peg.606
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148650.peg.1396
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148650.peg.917
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148650.peg.535
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148650.peg.1982
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.148650.peg.1554
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148650.peg.535
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.148650.peg.1544
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148650.peg.606
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148650.peg.917
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148650.peg.99
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148650.peg.1275
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148650.peg.606
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148650.peg.1396
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148650.peg.1972
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148650.peg.917
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148650.peg.535
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148650.peg.1982
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.148650.peg.1554
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148650.peg.535
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148650.peg.917
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148650.peg.607
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148650.peg.554
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148650.peg.555
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148650.peg.1030
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148650.peg.1396
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148650.peg.804
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148650.peg.410
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.148650.peg.202
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.148650.peg.892
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148650.peg.1393
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148650.peg.1393
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148650.peg.1066
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.148650.peg.847
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148650.peg.848
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148650.peg.530
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.148650.peg.1989
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148650.peg.1731
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.148650.peg.2010
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.148650.peg.1833
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.148650.peg.1831
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.148650.peg.1815
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.148650.peg.2003
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.148650.peg.2011
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.148650.peg.2000
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.148650.peg.2020
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.148650.peg.2009
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.148650.peg.903
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148650.peg.1832
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.148650.peg.951
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.148650.peg.1757
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.148650.peg.1998
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.148650.peg.1995
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.148650.peg.2004
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.148650.peg.547
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.148650.peg.1758
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.148650.peg.1588
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.148650.peg.2001
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.148650.peg.1996
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.148650.peg.909
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.148650.peg.909
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.148650.peg.2058
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.148650.peg.1589
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.148650.peg.1589
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.148650.peg.1432
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.148650.peg.952
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.148650.peg.2015
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.148650.peg.1993
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.148650.peg.1994
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.148650.peg.2005
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.148650.peg.2008
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148650.peg.1834
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.148650.peg.914
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.148650.peg.1992
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.148650.peg.2017
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.148650.peg.1989
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.148650.peg.2016
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.148650.peg.2006
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.148650.peg.2006
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.148650.peg.1534
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.148650.peg.2035
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.148650.peg.2002
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.148650.peg.913
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.148650.peg.913
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.148650.peg.1997
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.148650.peg.50
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.148650.peg.1552
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.148650.peg.1825
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.148650.peg.1817
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.148650.peg.1999
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.148650.peg.2018
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.148650.peg.2010
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.148650.peg.912
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.148650.peg.1990
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.148650.peg.2007
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.148650.peg.1816
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.148650.peg.1826
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.148650.peg.1725
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148650.peg.970
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.148650.peg.1806
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148650.peg.1256
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148650.peg.1403
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148650.peg.412
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148650.peg.1731
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148650.peg.515
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148650.peg.821
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148650.peg.384
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148650.peg.991
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148650.peg.97
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.148650.peg.9
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.148650.peg.1817
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.148650.peg.1818
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148650.peg.10
Rubrerythrin	Rubrerythrin	fig|6666666.148650.peg.569
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.148650.peg.1511
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.148650.peg.1544
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.148650.peg.193
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.148650.peg.678
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.148650.peg.82
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148650.peg.230
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148650.peg.424
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.148650.peg.609
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148650.peg.775
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148650.peg.776
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.340
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.1430
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.1941
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.340
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.1430
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148650.peg.1941
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148650.peg.901
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.148650.peg.571
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148650.peg.807
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148650.peg.807
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148650.peg.1341
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148650.peg.1342
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148650.peg.937
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.148650.peg.337
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148650.peg.546
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.148650.peg.329
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.148650.peg.913
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.148650.peg.1280
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.148650.peg.70
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148650.peg.79
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148650.peg.1977
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148650.peg.1315
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148650.peg.1258
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.148650.peg.885
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.148650.peg.1367
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.148650.peg.925
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.148650.peg.925
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.148650.peg.1128
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148650.peg.1129
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148650.peg.1130
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148650.peg.197
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.148650.peg.13
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148650.peg.1600
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148650.peg.1129
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148650.peg.1130
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148650.peg.1977
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148650.peg.59
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148650.peg.157
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148650.peg.156
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148650.peg.157
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148650.peg.156
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.148650.peg.1991
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.148650.peg.1991
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148650.peg.115
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.148650.peg.6
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.148650.peg.853
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.148650.peg.1890
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.148650.peg.854
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.148650.peg.5
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148650.peg.855
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148650.peg.7
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148650.peg.16
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148650.peg.410
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.148650.peg.856
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.148650.peg.1149
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.148650.peg.1148
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.148650.peg.921
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.148650.peg.1668
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148650.peg.1558
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148650.peg.1627
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.148650.peg.264
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.262
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148650.peg.263
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148650.peg.1508
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148650.peg.888
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.148650.peg.1291
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148650.peg.825
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148650.peg.663
Tn552	Beta-lactamase (EC 3.5.2.6)	fig|6666666.148650.peg.2092
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.148650.peg.1968
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.148650.peg.415
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.391
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.414
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148650.peg.1295
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148650.peg.388
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148650.peg.416
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.148650.peg.718
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148650.peg.1348
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148650.peg.1420
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148650.peg.1444
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148650.peg.1482
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148650.peg.1519
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148650.peg.1959
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148650.peg.66
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.148650.peg.1830
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.148650.peg.1086
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.148650.peg.1774
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.148650.peg.67
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.148650.peg.202
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.148650.peg.635
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.911
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148650.peg.1398
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.148650.peg.239
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.148650.peg.1991
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.148650.peg.185
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148650.peg.890
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.148650.peg.1991
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.148650.peg.185
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.148650.peg.817
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148650.peg.890
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.148650.peg.1818
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.148650.peg.1828
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148650.peg.1319
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.148650.peg.176
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.148650.peg.2014
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.148650.peg.68
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.148650.peg.953
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.148650.peg.1262
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148650.peg.2013
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.148650.peg.1031
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.148650.peg.1616
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.148650.peg.1046
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148650.peg.128
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148650.peg.546
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148650.peg.536
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.148650.peg.9
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.148650.peg.1280
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148650.peg.504
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.148650.peg.113
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148650.peg.1913
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148650.peg.154
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148650.peg.1079
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148650.peg.92
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148650.peg.1385
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148650.peg.2089
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148650.peg.1688
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148650.peg.1690
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148650.peg.1684
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148650.peg.1686
Type_VI_secretion_systems	ClpB protein	fig|6666666.148650.peg.143
Type_VI_secretion_systems	ClpB protein	fig|6666666.148650.peg.1056
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148650.peg.250
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148650.peg.1172
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148650.peg.1724
USS-DB-7	ClpB protein	fig|6666666.148650.peg.143
USS-DB-7	ClpB protein	fig|6666666.148650.peg.1056
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.148650.peg.1288
Universal_GTPases	GTP-binding protein EngA	fig|6666666.148650.peg.2061
Universal_GTPases	GTP-binding protein EngB	fig|6666666.148650.peg.1788
Universal_GTPases	GTP-binding protein Era	fig|6666666.148650.peg.2060
Universal_GTPases	GTP-binding protein HflX	fig|6666666.148650.peg.423
Universal_GTPases	GTP-binding protein Obg	fig|6666666.148650.peg.395
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.148650.peg.1151
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148650.peg.1672
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.148650.peg.8
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148650.peg.531
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148650.peg.236
Universal_GTPases	Translation elongation factor G	fig|6666666.148650.peg.1991
Universal_GTPases	Translation elongation factor LepA	fig|6666666.148650.peg.817
Universal_GTPases	Translation elongation factor Tu	fig|6666666.148650.peg.1828
Universal_GTPases	Translation initiation factor 2	fig|6666666.148650.peg.68
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148650.peg.969
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148650.peg.232
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.148650.peg.1121
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148650.peg.164
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.148650.peg.302
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.148650.peg.1903
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.148650.peg.1902
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.148650.peg.1904
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.148650.peg.1901
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.148650.peg.1905
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.148650.peg.1900
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.148650.peg.1899
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148650.peg.265
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148650.peg.765
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148650.peg.269
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.148650.peg.2066
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148650.peg.2065
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.148650.peg.389
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.148650.peg.1052
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148650.peg.384
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148650.peg.1553
YjeE	NAD(P)HX dehydratase	fig|6666666.148650.peg.1026
YjeE	NAD(P)HX epimerase	fig|6666666.148650.peg.1026
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148650.peg.384
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148650.peg.180
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.148650.peg.876
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.148650.peg.877
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.148650.peg.880
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148650.peg.875
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148650.peg.1404
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148650.peg.878
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.148650.peg.876
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.148650.peg.877
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148650.peg.875
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148650.peg.879
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148650.peg.1344
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148650.peg.1950
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148650.peg.1951
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148650.peg.1952
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148650.peg.1953
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148650.peg.228
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148650.peg.1394
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148650.peg.1672
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148650.peg.1333
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148650.peg.265
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148650.peg.945
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148650.peg.1615
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148650.peg.629
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.148650.peg.922
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148650.peg.550
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148650.peg.1843
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148650.peg.550
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.148650.peg.358
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148650.peg.76
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.148650.peg.1160
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.684
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148650.peg.1719
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148650.peg.1627
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.148650.peg.178
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148650.peg.134
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148650.peg.1381
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148650.peg.642
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148650.peg.1572
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148650.peg.917
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148650.peg.606
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148650.peg.606
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148650.peg.1396
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148650.peg.174
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.148650.peg.174
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.923
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148650.peg.1895
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148650.peg.338
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148650.peg.495
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148650.peg.758
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148650.peg.1175
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.148650.peg.918
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.148650.peg.1058
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.148650.peg.533
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148650.peg.41
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.148650.peg.1597
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148650.peg.1947
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148650.peg.1313
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.148650.peg.136
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.148650.peg.805
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.148650.peg.404
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.148650.peg.1720
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.148650.peg.549
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.148650.peg.632
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.148650.peg.1545
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.148650.peg.1110
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.148650.peg.612
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148650.peg.1759
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.148650.peg.954
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.148650.peg.972
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.148650.peg.73
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.148650.peg.1629
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148650.peg.228
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148650.peg.1394
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148650.peg.76
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.148650.peg.1091
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.148650.peg.1000
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148650.peg.1142
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148650.peg.1672
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148650.peg.71
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.148650.peg.70
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.148650.peg.72
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148650.peg.970
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.148650.peg.1642
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148650.peg.719
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148650.peg.720
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148650.peg.618
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148650.peg.1971
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148650.peg.230
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148650.peg.424
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148650.peg.991
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148650.peg.610
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148650.peg.1388
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.148650.peg.88
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148650.peg.327
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148650.peg.1777
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148650.peg.628
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148650.peg.1972
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148650.peg.1333
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148650.peg.1002
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148650.peg.1278
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148650.peg.758
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148650.peg.1391
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148650.peg.28
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148650.peg.1050
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.148650.peg.1390
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148650.peg.327
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148650.peg.1777
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148650.peg.628
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148650.peg.1972
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148650.peg.1002
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148650.peg.758
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148650.peg.1391
tRNAs	tRNA-Ala-GGC	fig|6666666.148650.rna.8
tRNAs	tRNA-Arg-ACG	fig|6666666.148650.rna.9
tRNAs	tRNA-Arg-ACG	fig|6666666.148650.rna.10
tRNAs	tRNA-Arg-CCG	fig|6666666.148650.rna.39
tRNAs	tRNA-Cys-GCA	fig|6666666.148650.rna.4
tRNAs	tRNA-Gly-CCC	fig|6666666.148650.rna.1
tRNAs	tRNA-Gly-GCC	fig|6666666.148650.rna.5
tRNAs	tRNA-Gly-GCC	fig|6666666.148650.rna.15
tRNAs	tRNA-Leu-CAA	fig|6666666.148650.rna.40
tRNAs	tRNA-Leu-CAG	fig|6666666.148650.rna.6
tRNAs	tRNA-Leu-GAG	fig|6666666.148650.rna.7
tRNAs	tRNA-Phe-GAA	fig|6666666.148650.rna.20
tRNAs	tRNA-Pro-CGG	fig|6666666.148650.rna.44
tRNAs	tRNA-Pro-GGG	fig|6666666.148650.rna.36
tRNAs	tRNA-Ser-GGA	fig|6666666.148650.rna.17
tRNAs	tRNA-Trp-CCA	fig|6666666.148650.rna.47
