16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148651.peg.757
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.148651.peg.758
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148651.peg.167
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.148651.peg.759
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.148651.peg.356
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148651.peg.1486
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148651.peg.1227
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148651.peg.254
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148651.peg.1849
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148651.peg.1803
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148651.peg.1656
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148651.peg.1652
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148651.peg.720
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148651.peg.171
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148651.peg.330
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148651.peg.602
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148651.peg.1109
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148651.peg.1386
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148651.peg.1766
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.331
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.355
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.396
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.523
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.788
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.807
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.1307
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.1321
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148651.peg.1391
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148651.peg.856
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148651.peg.958
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.148651.peg.1008
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148651.peg.58
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148651.peg.1399
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148651.peg.1223
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148651.peg.1224
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148651.peg.1223
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148651.peg.1237
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148651.peg.1228
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148651.peg.1227
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148651.peg.1225
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148651.peg.1928
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148651.peg.1226
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148651.peg.1929
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148651.peg.580
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.144
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.480
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148651.peg.580
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.148651.peg.1078
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.148651.peg.1079
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.148651.peg.1080
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.148651.peg.1081
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.148651.peg.1082
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.148651.peg.1075
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.148651.peg.1076
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.148651.peg.708
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148651.peg.869
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148651.peg.313
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148651.peg.780
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.148651.peg.151
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1479
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1481
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148651.peg.919
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148651.peg.1707
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148651.peg.1227
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.690
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.1511
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148651.peg.690
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148651.peg.1511
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.690
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.1511
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148651.peg.1880
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148651.peg.1880
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148651.peg.69
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148651.peg.1880
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148651.peg.211
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148651.peg.70
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148651.peg.213
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.148651.peg.611
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148651.peg.1341
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148651.peg.1342
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148651.peg.579
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148651.peg.491
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.148651.peg.749
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148651.peg.1266
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148651.peg.757
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.148651.peg.1118
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.148651.peg.758
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.148651.peg.750
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.148651.peg.753
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.148651.peg.274
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148651.peg.748
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.148651.peg.1270
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.148651.peg.1920
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148651.peg.71
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148651.peg.1190
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.148651.peg.532
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.148651.peg.170
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.148651.peg.169
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.148651.peg.168
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.148651.peg.1365
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.148651.peg.978
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148651.peg.62
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.148651.peg.759
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148651.peg.491
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.148651.peg.749
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148651.peg.757
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.148651.peg.1118
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.148651.peg.758
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.148651.peg.750
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.148651.peg.753
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148651.peg.748
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148651.peg.71
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148651.peg.72
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.148651.peg.170
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.148651.peg.169
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.148651.peg.168
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.148651.peg.166
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.148651.peg.1365
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.148651.peg.978
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.148651.peg.71
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.148651.peg.72
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.148651.peg.1118
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148651.peg.927
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148651.peg.248
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148651.peg.1921
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.148651.peg.232
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148651.peg.696
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148651.peg.1422
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.148651.peg.923
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148651.peg.167
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.148651.peg.170
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.148651.peg.169
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.148651.peg.168
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.148651.peg.166
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.148651.peg.1365
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.148651.peg.978
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.148651.peg.1084
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.148651.peg.1084
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148651.peg.705
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148651.peg.62
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148651.peg.719
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148651.peg.488
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148651.peg.345
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148651.peg.590
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148651.peg.1154
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148651.peg.1415
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.148651.peg.1414
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.148651.peg.1125
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.148651.peg.1124
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.148651.peg.888
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148651.peg.1096
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148651.peg.1032
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148651.peg.1308
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148651.peg.1727
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148651.peg.345
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148651.peg.590
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148651.peg.1415
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.148651.peg.1414
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.148651.peg.1125
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.148651.peg.1124
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.148651.peg.888
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148651.peg.56
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148651.peg.1032
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148651.peg.345
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148651.peg.590
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148651.peg.1154
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148651.peg.1415
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.148651.peg.1414
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.148651.peg.1125
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.148651.peg.1124
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.148651.peg.888
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148651.peg.1096
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148651.peg.56
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148651.peg.1032
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148651.peg.1308
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148651.peg.1727
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148651.peg.703
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.148651.peg.947
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.148651.peg.470
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148651.peg.277
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.148651.peg.684
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.148651.peg.1667
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.148651.peg.1666
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148651.peg.149
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148651.peg.976
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148651.peg.1114
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148651.peg.680
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148651.peg.1113
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148651.peg.211
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148651.peg.1499
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148651.peg.1877
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.148651.peg.1195
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.148651.peg.326
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.148651.peg.326
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148651.peg.278
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148651.peg.991
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148651.peg.578
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.148651.peg.1008
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148651.peg.58
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148651.peg.89
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148651.peg.624
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.148651.peg.623
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.148651.peg.622
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148651.peg.44
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148651.peg.398
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.148651.peg.399
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.148651.peg.400
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148651.peg.1437
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.148651.peg.1222
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148651.peg.844
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148651.peg.624
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148651.peg.1614
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148651.peg.624
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148651.peg.1614
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.148651.peg.533
CBSS-296591.1.peg.2330	NAD-dependent epimerase/dehydratase family protein	fig|6666666.148651.peg.1555
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148651.peg.1635
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148651.peg.1458
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148651.peg.1592
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.148651.peg.1606
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.148651.peg.1605
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148651.peg.1981
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.148651.peg.968
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148651.peg.606
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148651.peg.859
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148651.peg.14
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.148651.peg.1265
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148651.peg.580
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148651.peg.580
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.148651.peg.1836
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148651.peg.123
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.148651.peg.122
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148651.peg.1272
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.148651.peg.1618
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148651.peg.1665
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148651.peg.74
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148651.peg.1615
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148651.peg.976
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.2
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.558
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.666
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.1143
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.1295
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148651.peg.741
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148651.peg.1190
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.148651.peg.1134
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.148651.peg.169
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.148651.peg.168
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.148651.peg.1365
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148651.peg.1169
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148651.peg.1093
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148651.peg.1883
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.148651.peg.1187
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148651.peg.1194
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148651.peg.313
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.148651.peg.1597
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.447
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.862
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.148651.peg.1086
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148651.peg.125
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.148651.peg.518
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148651.peg.137
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148651.peg.970
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148651.peg.757
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148651.peg.167
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148651.peg.837
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.148651.peg.1618
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148651.peg.313
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148651.peg.1159
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148651.peg.1457
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148651.peg.919
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148651.peg.1707
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148651.peg.228
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148651.peg.248
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148651.peg.92
CRISPRs	CRISPR-associated RecB family exonuclease Cas4a	fig|6666666.148651.peg.219
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.148651.peg.222
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148651.peg.218
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148651.peg.1526
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148651.peg.217
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148651.peg.1527
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr2	fig|6666666.148651.peg.1521
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr3	fig|6666666.148651.peg.1522
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr4	fig|6666666.148651.peg.1523
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr5	fig|6666666.148651.peg.1524
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr6	fig|6666666.148651.peg.1525
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.148651.peg.112
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148651.peg.111
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148651.peg.681
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148651.peg.317
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148651.peg.516
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148651.peg.1819
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148651.peg.310
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148651.peg.1088
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.148651.peg.311
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148651.peg.1780
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.689
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1275
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1770
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148651.peg.1499
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148651.peg.1877
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.148651.peg.797
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148651.peg.938
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148651.peg.1719
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.148651.peg.435
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.148651.peg.870
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.148651.peg.871
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148651.peg.1460
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.148651.peg.1913
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.690
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.1511
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.690
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.1511
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.148651.peg.496
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148651.peg.71
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148651.peg.72
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148651.peg.160
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148651.peg.486
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148651.peg.1487
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.148651.peg.395
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148651.peg.908
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.148651.peg.111
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.148651.peg.1366
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.148651.peg.654
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148651.peg.653
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148651.peg.617
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148651.peg.1517
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148651.peg.491
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148651.peg.1266
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148651.peg.682
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148651.peg.48
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148651.peg.49
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.148651.peg.1276
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.148651.peg.339
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148651.peg.1039
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148651.peg.601
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148651.peg.873
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148651.peg.1848
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148651.peg.1896
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148651.peg.485
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148651.peg.826
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148651.peg.1895
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148651.peg.1180
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.148651.peg.1836
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148651.peg.247
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148651.peg.1065
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148651.peg.247
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148651.peg.546
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148651.peg.172
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148651.peg.1850
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148651.peg.175
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148651.peg.1059
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148651.peg.646
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148651.peg.174
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148651.peg.1200
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148651.peg.644
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148651.peg.646
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148651.peg.647
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148651.peg.647
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148651.peg.644
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148651.peg.1852
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148651.peg.1854
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148651.peg.1747
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148651.peg.1851
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148651.peg.173
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148651.peg.1347
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148651.peg.1016
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148651.peg.1950
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.148651.peg.1405
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148651.peg.1016
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148651.peg.1950
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148651.peg.1169
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148651.peg.423
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.148651.peg.244
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148651.peg.745
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148651.peg.718
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.148651.peg.1197
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148651.peg.1202
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148651.peg.443
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148651.peg.1614
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.148651.peg.1489
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.148651.peg.1489
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148651.peg.745
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148651.peg.718
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.148651.peg.1363
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148651.peg.1202
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148651.peg.443
Coenzyme_B12_biosynthesis	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	fig|6666666.148651.peg.1378
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148651.peg.172
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148651.peg.1850
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148651.peg.175
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148651.peg.1059
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148651.peg.646
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148651.peg.174
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148651.peg.1200
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148651.peg.644
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148651.peg.646
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148651.peg.647
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148651.peg.647
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.148651.peg.645
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.148651.peg.645
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148651.peg.644
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148651.peg.1852
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148651.peg.1854
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148651.peg.1747
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148651.peg.1851
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148651.peg.173
Coenzyme_B12_biosynthesis	Predicted cobalt transporter in Bacteroides_Porphyromonas	fig|6666666.148651.peg.1167
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148651.peg.1347
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.148651.peg.1345
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148651.peg.1344
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148651.peg.1376
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148651.peg.1809
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.148651.peg.916
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148651.peg.846
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.148651.peg.1181
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.148651.peg.1565
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.148651.peg.457
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148651.peg.1065
Conjugative_transposon,_Bacteroidales	Conjugative transposon primase TraP	fig|6666666.148651.peg.666
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148651.peg.900
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148651.peg.904
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148651.peg.1739
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148651.peg.901
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148651.peg.902
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148651.peg.1738
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.148651.peg.905
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148651.peg.906
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148651.peg.1736
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148651.peg.182
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148651.peg.657
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148651.peg.183
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148651.peg.658
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148651.peg.184
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148651.peg.659
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148651.peg.185
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148651.peg.660
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148651.peg.186
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148651.peg.661
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraL	fig|6666666.148651.peg.662
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148651.peg.188
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148651.peg.663
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148651.peg.189
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148651.peg.664
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148651.peg.190
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148651.peg.665
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148651.peg.191
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148651.peg.667
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148651.peg.33
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148651.peg.897
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148651.peg.32
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148651.peg.896
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148651.peg.34
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148651.peg.898
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148651.peg.927
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148651.peg.180
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.148651.peg.1053
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148651.peg.228
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148651.peg.248
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148651.peg.779
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148651.peg.258
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148651.peg.1088
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.148651.peg.232
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148651.peg.696
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148651.peg.1422
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148651.peg.1962
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.148651.peg.337
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148651.peg.1113
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148651.peg.1113
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.148651.peg.945
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.148651.peg.798
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.447
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.862
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.148651.peg.427
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.148651.peg.1755
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1479
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1481
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1479
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1481
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148651.peg.310
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.148651.peg.1187
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.148651.peg.1177
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.148651.peg.337
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148651.peg.1026
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.148651.peg.353
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148651.peg.160
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148651.peg.486
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.148651.peg.1161
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148651.peg.19
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148651.peg.571
DNA_processing_cluster	Recombination protein RecR	fig|6666666.148651.peg.1189
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.148651.peg.1885
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.148651.peg.240
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.148651.peg.1603
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.148651.peg.1516
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148651.peg.149
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.148651.peg.320
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.148651.peg.630
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.148651.peg.923
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.148651.peg.1491
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.148651.peg.988
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.148651.peg.865
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148651.peg.733
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148651.peg.271
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148651.peg.935
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148651.peg.1194
DNA_repair,_bacterial	RecA protein	fig|6666666.148651.peg.912
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.148651.peg.863
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.148651.peg.404
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.148651.peg.370
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.148651.peg.1231
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.148651.peg.379
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148651.peg.621
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.148651.peg.408
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.148651.peg.1309
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.148651.peg.395
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.148651.peg.1501
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.148651.peg.912
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.148651.peg.1189
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.148651.peg.863
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148651.peg.1026
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148651.peg.1883
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.148651.peg.370
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.148651.peg.1421
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.148651.peg.912
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.148651.peg.57
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148651.peg.779
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.148651.peg.496
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148651.peg.160
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148651.peg.486
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148651.peg.1487
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.148651.peg.395
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148651.peg.49
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.148651.peg.394
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.148651.peg.91
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.148651.peg.1191
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148651.peg.180
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148651.peg.19
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148651.peg.571
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	fig|6666666.148651.peg.886
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148651.peg.160
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148651.peg.486
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148651.peg.1128
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148651.peg.1615
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148651.peg.728
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.148651.peg.110
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.148651.peg.171
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.148651.peg.133
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.148651.peg.969
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.148651.peg.1063
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148651.peg.171
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.148651.peg.1007
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.148651.peg.1683
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.148651.peg.1683
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148651.peg.330
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148651.peg.1399
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.148651.peg.1625
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.148651.peg.1624
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148651.peg.108
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148651.peg.109
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.148651.peg.944
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148651.peg.1051
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148651.peg.1239
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.148651.peg.1238
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.148651.peg.1150
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148651.peg.1009
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.148651.peg.731
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148651.peg.767
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.148651.peg.1513
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.144
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.480
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.148651.peg.655
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.148651.peg.629
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148651.peg.213
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148651.peg.76
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148651.peg.1947
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148651.peg.260
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.148651.peg.607
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148651.peg.78
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148651.peg.407
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.148651.peg.1304
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148651.peg.851
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148651.peg.852
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148651.peg.516
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148651.peg.1819
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148651.peg.83
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.148651.peg.1222
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1220
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1221
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148651.peg.99
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148651.peg.1145
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148651.peg.463
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148651.peg.769
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148651.peg.1011
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148651.peg.1437
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.148651.peg.328
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.148651.peg.531
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.148651.peg.329
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.148651.peg.363
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.148651.peg.1164
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.148651.peg.75
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148651.peg.1222
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1220
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1221
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.148651.peg.1222
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.148651.peg.648
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1220
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1221
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.148651.peg.716
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148651.peg.741
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.148651.peg.716
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148651.peg.757
Flavodoxin	Flavodoxin 1	fig|6666666.148651.peg.1482
Flavodoxin	Flavodoxin 2	fig|6666666.148651.peg.1297
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.148651.peg.1297
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148651.peg.279
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148651.peg.917
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148651.peg.1486
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148651.peg.1896
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148651.peg.254
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.148651.peg.1215
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148651.peg.1404
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148651.peg.1085
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.148651.peg.1215
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148651.peg.1778
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148651.peg.485
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148651.peg.826
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148651.peg.1895
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148651.peg.253
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148651.peg.279
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148651.peg.917
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148651.peg.718
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148651.peg.1266
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148651.peg.1404
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148651.peg.1085
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148651.peg.1778
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148651.peg.682
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148651.peg.1202
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148651.peg.1039
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148651.peg.997
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.148651.peg.628
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148651.peg.744
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148651.peg.744
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148651.peg.997
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148651.peg.924
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148651.peg.1352
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.148651.peg.1631
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.148651.peg.1757
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148651.peg.1442
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148651.peg.1809
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.148651.peg.855
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148651.peg.816
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148651.peg.1052
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.148651.peg.513
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148651.peg.1442
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148651.peg.773
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.148651.peg.618
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1479
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1481
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148651.peg.1259
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148651.peg.1199
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148651.peg.1441
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148651.peg.1205
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148651.peg.602
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148651.peg.1199
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148651.peg.1457
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148651.peg.878
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1479
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1481
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.148651.peg.968
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148651.peg.619
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148651.peg.999
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148651.peg.999
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148651.peg.879
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.127
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.1368
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.1861
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148651.peg.602
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148651.peg.1665
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148651.peg.1457
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148651.peg.1849
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.148651.peg.968
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148651.peg.619
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148651.peg.606
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148651.peg.859
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148651.peg.1715
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148651.peg.1176
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148651.peg.1922
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148651.peg.1320
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.148651.peg.1822
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148651.peg.1259
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.148651.peg.1304
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148651.peg.681
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148651.peg.317
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148651.peg.851
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148651.peg.852
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148651.peg.141
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148651.peg.516
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148651.peg.1819
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148651.peg.83
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.148651.peg.51
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148651.peg.1930
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148651.peg.1780
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.148651.peg.1304
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148651.peg.141
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148651.peg.1819
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148651.peg.83
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148651.peg.1930
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148651.peg.1780
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.148651.peg.1501
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.148651.peg.532
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148651.peg.1318
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.447
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.862
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148651.peg.125
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148651.peg.1560
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.148651.peg.341
GroEL_GroES	Chaperone protein DnaK	fig|6666666.148651.peg.597
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.148651.peg.116
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.148651.peg.115
GroEL_GroES	Heat shock protein GrpE	fig|6666666.148651.peg.340
Group_II_intron-associated_genes	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	fig|6666666.148651.peg.1495
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.148651.peg.341
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.148651.peg.597
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.148651.peg.340
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148651.peg.1204
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148651.peg.1098
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148651.peg.546
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148651.peg.1768
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148651.peg.49
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.148651.peg.1435
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.148651.peg.356
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148651.peg.503
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.148651.peg.576
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148651.peg.1226
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148651.peg.1929
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.689
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1275
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1770
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.148651.peg.86
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148651.peg.1464
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148651.peg.1204
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.148651.peg.549
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.689
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1275
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1770
Hfl_operon	GTP-binding protein HflX	fig|6666666.148651.peg.1968
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148651.peg.1967
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148651.peg.1652
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.148651.peg.1657
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.148651.peg.1653
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.148651.peg.1957
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.148651.peg.354
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148651.peg.1316
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148651.peg.971
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148651.peg.1098
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.148651.peg.231
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.148651.peg.232
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148651.peg.1341
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148651.peg.1342
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.148651.peg.605
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148651.peg.180
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
Inteins	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148651.peg.734
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148651.peg.1193
Inteins	Translation initiation factor 2	fig|6666666.148651.peg.470
Inteins	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148651.peg.1725
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148651.peg.313
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148651.peg.780
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.148651.peg.872
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148651.peg.467
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.148651.peg.468
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.148651.peg.466
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.148651.peg.342
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.148651.peg.548
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.148651.peg.1672
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148651.peg.1223
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148651.peg.869
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148651.peg.1227
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.690
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.1511
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148651.peg.137
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148651.peg.233
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148651.peg.970
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148651.peg.1760
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148651.peg.272
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148651.peg.958
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148651.peg.1797
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148651.peg.690
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148651.peg.1511
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148651.peg.837
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.690
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.1511
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.690
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.1511
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148651.peg.690
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148651.peg.1511
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.690
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.1511
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148651.peg.1511
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148651.peg.837
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148651.peg.856
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.148651.peg.1364
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148651.peg.1463
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.148651.peg.1296
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148651.peg.1012
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.148651.peg.995
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.148651.peg.502
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148651.peg.1315
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.148651.peg.1775
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148651.peg.938
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148651.peg.1719
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.148651.peg.1765
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148651.peg.343
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148651.peg.1010
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.148651.peg.138
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.148651.peg.509
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.148651.peg.1966
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148651.peg.1863
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148651.peg.976
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148651.peg.1114
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148651.peg.1463
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.148651.peg.388
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.148651.peg.386
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148651.peg.387
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148651.peg.389
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.148651.peg.384
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.148651.peg.385
Lactate_utilization	L-lactate permease	fig|6666666.148651.peg.1139
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.148651.peg.1862
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148651.peg.1863
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.148651.peg.1864
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148651.peg.1635
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148651.peg.1122
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148651.peg.997
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148651.peg.924
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148651.peg.1352
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.148651.peg.1121
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148651.peg.1635
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148651.peg.924
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148651.peg.1352
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148651.peg.92
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148651.peg.869
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148651.peg.869
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148651.peg.1849
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148651.peg.1725
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.148651.peg.573
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148651.peg.1142
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.148651.peg.573
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148651.peg.1142
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148651.peg.945
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148651.peg.1093
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.148651.peg.1846
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.148651.peg.1834
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.148651.peg.946
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148651.peg.1011
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148651.peg.1012
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148651.peg.1315
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148651.peg.839
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148651.peg.840
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148651.peg.838
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148651.peg.1695
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148651.peg.343
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148651.peg.1010
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.148651.peg.864
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.148651.peg.864
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148651.peg.495
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148651.peg.1507
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148651.peg.1033
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148651.peg.760
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.148651.peg.1271
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148651.peg.1272
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148651.peg.1845
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148651.peg.495
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148651.peg.1507
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148651.peg.1033
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148651.peg.760
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.148651.peg.1271
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148651.peg.1272
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148651.peg.1845
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148651.peg.1230
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148651.peg.1229
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148651.peg.1233
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.148651.peg.1234
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.148651.peg.1236
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148651.peg.1224
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148651.peg.1223
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.148651.peg.1235
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148651.peg.1237
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148651.peg.1228
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148651.peg.1227
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148651.peg.1225
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148651.peg.1928
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148651.peg.1226
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148651.peg.1929
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148651.peg.1230
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148651.peg.1229
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148651.peg.1233
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148651.peg.108
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148651.peg.109
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.2
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.558
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.666
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.1143
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148651.peg.1295
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148651.peg.741
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.148651.peg.380
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.148651.peg.747
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148651.peg.1422
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.447
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.862
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.148651.peg.797
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.148651.peg.79
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148651.peg.1922
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148651.peg.1122
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148651.peg.925
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148651.peg.1824
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148651.peg.1320
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148651.peg.1260
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148651.peg.930
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148651.peg.992
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148651.peg.1243
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148651.peg.1245
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.148651.peg.319
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.148651.peg.237
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.148651.peg.1211
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.148651.peg.705
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148651.peg.997
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148651.peg.1064
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148651.peg.1159
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148651.peg.756
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148651.peg.708
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148651.peg.717
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148651.peg.103
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148651.peg.580
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148651.peg.1975
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148651.peg.579
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.148651.peg.1639
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148651.peg.1153
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148651.peg.580
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148651.peg.1975
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148651.peg.579
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148651.peg.580
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148651.peg.773
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148651.peg.63
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148651.peg.1934
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148651.peg.503
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.148651.peg.420
Multidrug_Resistance_Efflux_Pumps	Membrane fusion protein of RND family multidrug efflux pump	fig|6666666.148651.peg.1949
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148651.peg.1742
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.148651.peg.721
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148651.peg.1159
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148651.peg.74
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148651.peg.1875
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148651.peg.390
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148651.peg.391
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.148651.peg.305
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.148651.peg.306
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.148651.peg.307
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.148651.peg.1568
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.148651.peg.1569
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.148651.peg.1570
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.148651.peg.383
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148651.peg.1072
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148651.peg.1073
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148651.peg.1074
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148651.peg.601
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148651.peg.1635
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148651.peg.1421
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148651.peg.1421
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.148651.peg.107
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148651.peg.1072
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.148651.peg.1774
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.148651.peg.107
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148651.peg.1338
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148651.peg.1023
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.148651.peg.1022
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148651.peg.1073
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148651.peg.1074
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.148651.peg.1673
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.148651.peg.1678
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.148651.peg.1677
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.148651.peg.1676
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.148651.peg.1674
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.148651.peg.1675
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.148651.peg.1247
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.148651.peg.1249
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.148651.peg.1250
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.148651.peg.1251
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.148651.peg.1252
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.148651.peg.1253
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.148651.peg.1104
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.148651.peg.1106
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148651.peg.1107
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148651.peg.1103
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148651.peg.1103
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.148651.peg.1961
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148651.peg.1338
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.148651.peg.1301
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148651.peg.1300
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148651.peg.283
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.148651.peg.1870
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.148651.peg.922
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148651.peg.137
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148651.peg.233
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148651.peg.970
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148651.peg.1760
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148651.peg.272
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148651.peg.958
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148651.peg.1797
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.148651.peg.487
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148651.peg.971
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148651.peg.472
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.148651.peg.947
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.148651.peg.471
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.148651.peg.470
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148651.peg.1486
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148651.peg.1803
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148651.peg.1656
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.148651.peg.720
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148651.peg.720
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.148651.peg.462
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.148651.peg.864
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.148651.peg.462
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148651.peg.283
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.148651.peg.462
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.148651.peg.1756
Oxidative_stress	Rubrerythrin	fig|6666666.148651.peg.841
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148651.peg.393
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148651.peg.1071
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148651.peg.310
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148651.peg.1399
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148651.peg.1088
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.148651.peg.628
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.148651.peg.311
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148651.peg.1407
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148651.peg.1407
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148651.peg.757
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148651.peg.786
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148651.peg.1159
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148651.peg.816
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148651.peg.680
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148651.peg.167
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.148651.peg.755
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.148651.peg.166
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148651.peg.1141
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148651.peg.139
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148651.peg.752
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148651.peg.751
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148651.peg.754
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148651.peg.756
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148651.peg.708
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148651.peg.717
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148651.peg.786
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148651.peg.751
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148651.peg.754
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148651.peg.756
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148651.peg.708
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148651.peg.717
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.148651.peg.822
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148651.peg.820
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148651.peg.821
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148651.peg.458
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148651.peg.407
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.148651.peg.742
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148651.peg.839
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148651.peg.840
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148651.peg.407
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148651.peg.488
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.148651.peg.916
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148651.peg.120
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148651.peg.920
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.148651.peg.1557
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148651.peg.854
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148651.peg.1812
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148651.peg.1813
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148651.peg.1967
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.148651.peg.1804
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.148651.peg.1549
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148651.peg.175
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148651.peg.1059
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148651.peg.83
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148651.peg.1457
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148651.peg.1849
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1479
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148651.peg.1481
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.148651.peg.968
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148651.peg.619
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148651.peg.1259
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148651.peg.602
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148651.peg.71
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148651.peg.72
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148651.peg.816
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148651.peg.1921
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148651.peg.1802
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148651.peg.580
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148651.peg.69
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.148651.peg.61
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148651.peg.70
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148651.peg.1223
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148651.peg.1224
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148651.peg.1223
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148651.peg.1237
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148651.peg.1237
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148651.peg.1228
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148651.peg.854
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148651.peg.1967
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.690
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148651.peg.1511
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.690
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148651.peg.1511
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148651.peg.1511
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148651.peg.837
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148651.peg.820
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148651.peg.821
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148651.peg.458
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.148651.peg.1811
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148651.peg.231
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148651.peg.231
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148651.peg.1049
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148651.peg.232
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148651.peg.232
Potassium_homeostasis	cAMP-dependent Kef-type K+ transport system	fig|6666666.148651.peg.1101
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.148651.peg.1726
Programmed_frameshift	programmed frameshift-containing	fig|6666666.148651.peg.1726
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148651.peg.211
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1220
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1221
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148651.peg.1107
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148651.peg.1103
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.148651.peg.1108
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.148651.peg.1900
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148651.peg.283
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.148651.peg.341
Protein_chaperones	Chaperone protein DnaK	fig|6666666.148651.peg.597
Protein_chaperones	Chaperone protein HtpG	fig|6666666.148651.peg.600
Protein_chaperones	ClpB protein	fig|6666666.148651.peg.263
Protein_chaperones	ClpB protein	fig|6666666.148651.peg.724
Protein_chaperones	Heat shock protein GrpE	fig|6666666.148651.peg.340
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148651.peg.1114
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148651.peg.1100
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148651.peg.1171
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148651.peg.1172
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148651.peg.1918
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148651.peg.1744
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.148651.peg.409
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148651.peg.410
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.148651.peg.1783
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148651.peg.263
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148651.peg.724
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.148651.peg.630
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148651.peg.1511
Proton-dependent_Peptide_Transporters	Di/tripeptide permease DtpT	fig|6666666.148651.peg.1413
Purine_Utilization	Xanthine permease	fig|6666666.148651.peg.538
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.148651.peg.959
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148651.peg.44
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148651.peg.398
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148651.peg.44
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.148651.peg.966
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.148651.peg.683
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148651.peg.728
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.148651.peg.1214
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148651.peg.744
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148651.peg.744
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148651.peg.123
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148651.peg.682
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148651.peg.113
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.148651.peg.87
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148651.peg.1967
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.144
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.480
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148651.peg.537
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148651.peg.1506
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148651.peg.733
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148651.peg.271
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148651.peg.744
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148651.peg.744
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148651.peg.113
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148651.peg.1407
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148651.peg.233
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148651.peg.260
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148651.peg.878
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.148651.peg.1450
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148651.peg.516
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148651.peg.879
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.148651.peg.1241
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.148651.peg.1773
Pyrimidine_utilization	Uracil permease	fig|6666666.148651.peg.731
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148651.peg.1153
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.148651.peg.708
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148651.peg.869
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148651.peg.999
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148651.peg.999
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.148651.peg.1701
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148651.peg.1103
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.148651.peg.1818
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148651.peg.1930
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148651.peg.1222
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.148651.peg.1810
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148651.peg.493
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1220
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1221
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.148651.peg.1207
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148651.peg.1778
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148651.peg.448
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148651.peg.1445
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.148651.peg.615
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148651.peg.1867
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148651.peg.1868
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148651.peg.278
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148651.peg.991
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148651.peg.578
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148651.peg.846
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148651.peg.624
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.148651.peg.1492
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148651.peg.1408
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.148651.peg.1618
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148651.peg.258
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148651.peg.546
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148651.peg.78
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148651.peg.617
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148651.peg.1050
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.148651.peg.715
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148651.peg.979
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148651.peg.774
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.148651.peg.866
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148651.peg.71
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148651.peg.72
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148651.peg.908
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148651.peg.617
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148651.peg.1517
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148651.peg.908
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148651.peg.111
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.148651.peg.1366
RNA_modification_cluster	Protein YidD	fig|6666666.148651.peg.654
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148651.peg.653
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.148651.peg.1598
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148651.peg.390
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148651.peg.391
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.148651.peg.1424
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148651.peg.1190
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148651.peg.703
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.148651.peg.327
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148651.peg.727
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148651.peg.489
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148651.peg.785
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148651.peg.1438
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148651.peg.179
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148651.peg.277
RecA_and_RecX	RecA protein	fig|6666666.148651.peg.912
RecA_and_RecX	Regulatory protein RecX	fig|6666666.148651.peg.57
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148651.peg.76
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148651.peg.1947
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148651.peg.1875
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148651.peg.516
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148651.peg.493
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148651.peg.1338
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148651.peg.1023
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.148651.peg.106
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148651.peg.160
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148651.peg.486
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148651.peg.1128
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148651.peg.1615
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148651.peg.41
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.148651.peg.9
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.148651.peg.10
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.148651.peg.299
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.148651.peg.156
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148651.peg.1461
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.148651.peg.261
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148651.peg.1635
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148651.peg.1724
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148651.peg.1460
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148651.peg.1459
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148651.peg.1458
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148651.peg.735
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148651.peg.59
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148651.peg.267
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148651.peg.59
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148651.peg.975
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148651.peg.735
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148651.peg.975
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148651.peg.782
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148651.peg.735
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148651.peg.59
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148651.peg.267
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.148651.peg.1421
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148651.peg.59
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.148651.peg.371
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148651.peg.975
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148651.peg.735
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148651.peg.1742
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148651.peg.975
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148651.peg.782
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148651.peg.277
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148651.peg.735
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148651.peg.59
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148651.peg.267
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.148651.peg.1421
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148651.peg.59
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148651.peg.735
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148651.peg.976
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148651.peg.41
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148651.peg.1009
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148651.peg.782
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148651.peg.1088
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148651.peg.1766
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.148651.peg.1844
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.148651.peg.1704
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148651.peg.779
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148651.peg.779
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148651.peg.734
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.148651.peg.1192
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148651.peg.1193
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148651.peg.63
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.148651.peg.1568
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148651.peg.131
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.148651.peg.1589
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.148651.peg.388
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.148651.peg.386
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.148651.peg.1608
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.148651.peg.1582
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.148651.peg.1590
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.148651.peg.1579
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.148651.peg.1599
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.148651.peg.1588
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.148651.peg.604
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148651.peg.387
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.148651.peg.305
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.148651.peg.1667
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.148651.peg.1577
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.148651.peg.1574
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.148651.peg.1583
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.148651.peg.47
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.148651.peg.1666
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.148651.peg.1550
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.148651.peg.1580
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.148651.peg.1575
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.148651.peg.743
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.148651.peg.743
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.148651.peg.530
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.148651.peg.1551
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.148651.peg.1551
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.148651.peg.1366
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.148651.peg.306
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.148651.peg.1594
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.148651.peg.1572
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.148651.peg.1573
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.148651.peg.1584
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.148651.peg.1587
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148651.peg.389
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.148651.peg.738
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.148651.peg.1571
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.148651.peg.1596
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.148651.peg.1568
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.148651.peg.1595
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.148651.peg.1585
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.148651.peg.1585
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.148651.peg.321
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.148651.peg.509
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.148651.peg.1581
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.148651.peg.739
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.148651.peg.739
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.148651.peg.1576
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.148651.peg.1276
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.148651.peg.1423
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.148651.peg.380
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.148651.peg.1606
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.148651.peg.1578
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.148651.peg.1597
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.148651.peg.1589
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.148651.peg.740
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.148651.peg.1569
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.148651.peg.1586
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.148651.peg.1607
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.148651.peg.381
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.148651.peg.138
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148651.peg.1408
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.148651.peg.1618
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148651.peg.489
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148651.peg.785
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148651.peg.1768
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148651.peg.131
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148651.peg.78
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148651.peg.1438
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148651.peg.696
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148651.peg.1050
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148651.peg.1744
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.148651.peg.1980
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.148651.peg.1606
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.148651.peg.1605
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148651.peg.1981
Rubrerythrin	Rubrerythrin	fig|6666666.148651.peg.841
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.148651.peg.1805
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.148651.peg.371
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.148651.peg.1841
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.148651.peg.1357
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.148651.peg.1757
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148651.peg.315
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148651.peg.1969
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.148651.peg.978
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148651.peg.878
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148651.peg.879
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.127
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.1368
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.1861
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.127
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.1368
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148651.peg.1861
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148651.peg.602
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.148651.peg.1152
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148651.peg.1093
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148651.peg.1093
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148651.peg.1508
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148651.peg.1509
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148651.peg.1300
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.148651.peg.124
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148651.peg.48
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.148651.peg.116
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.148651.peg.739
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.148651.peg.576
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.148651.peg.468
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148651.peg.1760
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148651.peg.272
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148651.peg.1316
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148651.peg.491
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.148651.peg.758
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.148651.peg.1912
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.148651.peg.1288
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.148651.peg.1288
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.148651.peg.1111
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148651.peg.1110
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148651.peg.1109
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148651.peg.1849
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.148651.peg.1162
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148651.peg.1560
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148651.peg.1110
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148651.peg.1109
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148651.peg.272
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148651.peg.103
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148651.peg.928
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148651.peg.927
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148651.peg.928
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148651.peg.927
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.148651.peg.1570
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.148651.peg.1570
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148651.peg.233
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.148651.peg.1977
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.148651.peg.1384
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.148651.peg.442
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.148651.peg.1385
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.148651.peg.1976
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148651.peg.1386
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148651.peg.1165
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148651.peg.1978
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148651.peg.1766
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.148651.peg.1387
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.148651.peg.1785
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.148651.peg.1784
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.148651.peg.864
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.148651.peg.911
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148651.peg.844
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148651.peg.1715
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.148651.peg.1222
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1220
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148651.peg.1221
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148651.peg.1809
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148651.peg.760
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.148651.peg.1271
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148651.peg.1441
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148651.peg.1205
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.148651.peg.281
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.148651.peg.1771
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.689
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1275
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148651.peg.1770
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148651.peg.692
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148651.peg.1772
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.148651.peg.1866
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148651.peg.288
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148651.peg.819
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148651.peg.1348
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148651.peg.1379
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148651.peg.1502
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148651.peg.472
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.148651.peg.385
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.148651.peg.1831
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.148651.peg.1649
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.148651.peg.471
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.148651.peg.1844
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.148651.peg.339
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148651.peg.741
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.148651.peg.716
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.148651.peg.1570
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.148651.peg.956
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148651.peg.129
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.148651.peg.1570
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.148651.peg.956
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.148651.peg.1435
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148651.peg.129
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.148651.peg.1605
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.148651.peg.383
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148651.peg.228
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.148651.peg.947
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.148651.peg.1593
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.148651.peg.470
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.148651.peg.307
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.148651.peg.362
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148651.peg.1592
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.148651.peg.1008
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.148651.peg.1726
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.148651.peg.649
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148651.peg.248
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148651.peg.48
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148651.peg.58
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.148651.peg.1980
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.148651.peg.576
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148651.peg.89
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.148651.peg.231
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148651.peg.1176
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148651.peg.925
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148651.peg.1824
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148651.peg.771
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148651.peg.1750
Type_VI_secretion_systems	ClpB protein	fig|6666666.148651.peg.263
Type_VI_secretion_systems	ClpB protein	fig|6666666.148651.peg.724
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148651.peg.705
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148651.peg.1141
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148651.peg.139
USS-DB-7	ClpB protein	fig|6666666.148651.peg.263
USS-DB-7	ClpB protein	fig|6666666.148651.peg.724
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.148651.peg.1267
Universal_GTPases	GTP-binding protein EngA	fig|6666666.148651.peg.533
Universal_GTPases	GTP-binding protein EngB	fig|6666666.148651.peg.1636
Universal_GTPases	GTP-binding protein Era	fig|6666666.148651.peg.532
Universal_GTPases	GTP-binding protein HflX	fig|6666666.148651.peg.1968
Universal_GTPases	GTP-binding protein Obg	fig|6666666.148651.peg.684
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.148651.peg.1788
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148651.peg.908
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.148651.peg.1979
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148651.peg.62
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148651.peg.719
Universal_GTPases	Translation elongation factor G	fig|6666666.148651.peg.1570
Universal_GTPases	Translation elongation factor LepA	fig|6666666.148651.peg.1435
Universal_GTPases	Translation elongation factor Tu	fig|6666666.148651.peg.383
Universal_GTPases	Translation initiation factor 2	fig|6666666.148651.peg.470
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148651.peg.1407
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148651.peg.317
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.148651.peg.1118
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148651.peg.935
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.148651.peg.353
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.148651.peg.1283
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.148651.peg.1284
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.148651.peg.1282
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.148651.peg.1285
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.148651.peg.1281
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.148651.peg.1286
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.148651.peg.1287
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148651.peg.1223
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148651.peg.869
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148651.peg.1227
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.148651.peg.538
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148651.peg.537
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.148651.peg.691
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.148651.peg.655
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148651.peg.696
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148651.peg.1422
YjeE	NAD(P)HX dehydratase	fig|6666666.148651.peg.1013
YjeE	NAD(P)HX epimerase	fig|6666666.148651.peg.1013
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148651.peg.696
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148651.peg.951
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.148651.peg.749
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.148651.peg.750
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.148651.peg.753
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148651.peg.748
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148651.peg.786
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148651.peg.751
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.148651.peg.749
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.148651.peg.750
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148651.peg.748
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148651.peg.752
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148651.peg.1506
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148651.peg.1461
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148651.peg.1460
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148651.peg.1459
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148651.peg.1458
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148651.peg.313
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148651.peg.780
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148651.peg.908
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148651.peg.1517
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148651.peg.1223
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148651.peg.1308
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148651.peg.1727
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148651.peg.180
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.148651.peg.863
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148651.peg.44
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148651.peg.398
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148651.peg.44
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.148651.peg.112
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148651.peg.1762
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.148651.peg.1798
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.144
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148651.peg.480
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148651.peg.1715
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.148651.peg.949
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148651.peg.253
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148651.peg.767
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148651.peg.346
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148651.peg.857
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148651.peg.735
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148651.peg.975
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148651.peg.975
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148651.peg.782
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148651.peg.945
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.148651.peg.945
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.447
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148651.peg.862
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148651.peg.125
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148651.peg.1062
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148651.peg.1934
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148651.peg.1180
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.148651.peg.867
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.148651.peg.726
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.148651.peg.60
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148651.peg.1962
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.148651.peg.1558
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148651.peg.1464
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148651.peg.1318
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.148651.peg.255
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.148651.peg.1091
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.148651.peg.678
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.148651.peg.143
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.148651.peg.45
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.148651.peg.336
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.148651.peg.372
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.148651.peg.1057
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.148651.peg.981
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148651.peg.1665
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.148651.peg.308
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.148651.peg.1410
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.148651.peg.464
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.148651.peg.1713
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148651.peg.313
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148651.peg.780
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148651.peg.1762
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.148651.peg.1836
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.148651.peg.1041
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148651.peg.1778
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148651.peg.908
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148651.peg.467
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.148651.peg.468
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.148651.peg.466
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148651.peg.1408
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.148651.peg.615
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148651.peg.1867
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148651.peg.1868
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148651.peg.278
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148651.peg.991
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148651.peg.315
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148651.peg.1969
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148651.peg.1050
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148651.peg.979
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148651.peg.774
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.148651.peg.1754
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148651.peg.114
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148651.peg.1646
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148651.peg.179
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148651.peg.277
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148651.peg.1517
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148651.peg.1039
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148651.peg.578
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148651.peg.1934
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148651.peg.777
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148651.peg.1802
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148651.peg.653
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.148651.peg.776
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148651.peg.114
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148651.peg.1646
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148651.peg.179
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148651.peg.277
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148651.peg.1039
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148651.peg.1934
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148651.peg.777
tRNAs	tRNA-Ala-GGC	fig|6666666.148651.rna.20
tRNAs	tRNA-Arg-ACG	fig|6666666.148651.rna.16
tRNAs	tRNA-Arg-ACG	fig|6666666.148651.rna.17
tRNAs	tRNA-Arg-CCG	fig|6666666.148651.rna.18
tRNAs	tRNA-Cys-GCA	fig|6666666.148651.rna.4
tRNAs	tRNA-Gly-CCC	fig|6666666.148651.rna.43
tRNAs	tRNA-Gly-GCC	fig|6666666.148651.rna.5
tRNAs	tRNA-Gly-GCC	fig|6666666.148651.rna.49
tRNAs	tRNA-Leu-CAA	fig|6666666.148651.rna.29
tRNAs	tRNA-Leu-CAG	fig|6666666.148651.rna.6
tRNAs	tRNA-Leu-GAG	fig|6666666.148651.rna.7
tRNAs	tRNA-Phe-GAA	fig|6666666.148651.rna.23
tRNAs	tRNA-Pro-CGG	fig|6666666.148651.rna.14
tRNAs	tRNA-Pro-GGG	fig|6666666.148651.rna.25
tRNAs	tRNA-Ser-GGA	fig|6666666.148651.rna.15
tRNAs	tRNA-Trp-CCA	fig|6666666.148651.rna.12
